Citrus Sinensis ID: 018382

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------
Protein Sequence
MGSLDTERATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGSKLDP
Secondary Structure (PSIPRED)
cccccccccEEEEEEEccccccccEEEEcccccccccEEEEEEEcccHHHHHHHHccccccccccccccEEEEEEEEEcccccccccccEEEEcEEEcccccccccccccccccccccEEccccccccccccccccccEEEcccEEEEccccccccccccccccccccccHHHcccccccccEEEEEEEcccHHHHHHHHHHcccEEEEEEccccHHHHHHHHccccEEEEcccHHHHHHHHccccEEEEcccccccHHHHHHccccccEEEEEcccccccccccHHHHcccEEEEEcccccHHHHHHHHHHHHHccccccEEEEccccHHHHHHHHHHccccEEEEEEcccccccc
Secondary Structure Prediction (SSPRO)
cccEEEHHHHHHHHccccccccEEEEEEccccccccEEEEEEEEEccHHHHHHHHHccccccccEEccccEEEEEEEEcccccccccccEEEEccEEccccccHHccccccccccccEEEccccccccccccccccEEEEEcccEEEEccccccHHHHHHHHHHHHcccHHHHHHcccccccEEEEEEcHHHHHHHHHHHHHccccEEEEEEccHHHHHHHHHHcccEEEccccHHHHHHHcccccEEEEEcccHHHHHHHHHHHccccEEEEEEccccccccccccHEEccEEEEEEEEcccccHHHHHHHHHHccccEEEEEEcHHHHHHHHHHHHccccEEEEEEEEccccccc
Coil and Loop (DISEMBL)
MGSLDTERAtigwaakdpsgilspytytlrntgaedVYIKVLYCGichtdihqikndlgmsnypmvpgheVVGEVKEVgsevsnfkvgdkVGVGVLVGccrncrpceadvEQYCNKKIWSyndvytdgkptqggfaesMVVDQKFvvkipdgmaleQAAPLLCagvtvfsplshfglkqsglrggilglggvGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLgadqylvssdaTRMQEAADSLDYIIdtvpanhplepylSLLKLDGKLILTgvintpmqfltPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDvagskldp
Flexible Loop (DISEMBL)
MGSLDTERAtigwaakdpsgilsPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSevsnfkvgdkVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGadqylvssDATRMQEAADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFerlekndvryrfvvdvagskldp
Low Complexity Region (SEG)
MGSLDTERATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMvpghevvgevkevgsevSNFkvgdkvgvgvlvgCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSglrggilglggvghmgvliAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPYlsllkldgklilTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGSKLDP
Disordered region (IsUnstruct)
*********TIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVIS************LGADQYLV*********AADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVA******
Disordered Region (DISOPRED)
******E****GWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKK***AMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGS****
Disordered Region (DISEMBL)
********ATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGSKLDP
Disordered Region (DISPRO)
*GSLDTERATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGS****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGSLDTERATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGSKLDP
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	357	2.2.26 [Sep-21-2011]
O64969	356	Probable cinnamyl alcohol	N/A	no	0.997	1.0	0.814	1e-167
P31655	356	Probable cinnamyl alcohol	N/A	no	0.997	1.0	0.811	1e-167
P42495	360	Probable cinnamyl alcohol	N/A	no	0.997	0.988	0.851	1e-166
P50746	355	Probable cinnamyl alcohol	N/A	no	0.994	1.0	0.811	1e-165
P31656	358	Probable cinnamyl alcohol	N/A	no	0.997	0.994	0.803	1e-164
Q2KNL5	357	Cinnamyl alcohol dehydrog	N/A	no	0.994	0.994	0.833	1e-164
Q42726	354	Probable cinnamyl alcohol	N/A	no	0.991	1.0	0.800	1e-163
P30359	357	Probable cinnamyl alcohol	N/A	no	0.997	0.997	0.828	1e-163
P30360	357	Probable cinnamyl alcohol	N/A	no	0.997	0.997	0.811	1e-163
P31657	357	Probable cinnamyl alcohol	N/A	no	0.994	0.994	0.839	1e-157

>sp|O64969|CADH_EUCGL Probable cinnamyl alcohol dehydrogenase OS=Eucalyptus globulus GN=CAD PE=2 SV=1

 Score =  589 bits (1518), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 290/356 (81%), Positives = 323/356 (90%)

Query: 1   MGSLDTERATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGM 60
           MGSL+ ER T GWAA+DPSG+LSPYTY+LRNTG ED+YIKVL CGICH+DIHQIKNDLGM
Sbjct: 1   MGSLEKERTTTGWAARDPSGVLSPYTYSLRNTGPEDLYIKVLSCGICHSDIHQIKNDLGM 60

Query: 61  SNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWS 120
           S+YPMVPGHEVVGEV EVGSEV+ ++VGD+VG G++VGCCR+C PC +D EQYCNKKIW+
Sbjct: 61  SHYPMVPGHEVVGEVLEVGSEVTKYRVGDRVGTGIVVGCCRSCSPCNSDQEQYCNKKIWN 120

Query: 121 YNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQS 180
           YNDVYTDGKPTQGGFA  +VV ++FVVKIPDG+  EQAAPL+CAGVTV+SPL  FGLKQS
Sbjct: 121 YNDVYTDGKPTQGGFAGEIVVGERFVVKIPDGLESEQAAPLMCAGVTVYSPLVRFGLKQS 180

Query: 181 GLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQE 240
           GLRGGILGLGGVGHMGV IAKAMGHHVTVISSSDKKR EA+EHLGAD YLVSSD   M+E
Sbjct: 181 GLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKRTEALEHLGADAYLVSSDENGMKE 240

Query: 241 AADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFI 300
           A DSLDYI DT+P  HPLEPYL+LLKLDGKLILTGVIN P+QF++PMVMLGRK+ITGSFI
Sbjct: 241 ATDSLDYIFDTIPVVHPLEPYLALLKLDGKLILTGVINAPLQFISPMVMLGRKSITGSFI 300

Query: 301 GSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGSKLD 356
           GSMKET+EMLEFC+EKG+TS IEVIKMDYVN A ERLEKNDVRYRFVVDV GSKLD
Sbjct: 301 GSMKETEEMLEFCKEKGLTSQIEVIKMDYVNTALERLEKNDVRYRFVVDVVGSKLD 356

Involved in lignin biosynthesis. Catalyzes the final step specific for the production of lignin monomers, like coniferyl alcohol, sinapyl alcohol and 4-coumaryl alcohol.
Eucalyptus globulus (taxid: 34317)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 1EC: 9EC: 5

>sp|P31655|CADH2_EUCGU Probable cinnamyl alcohol dehydrogenase 2 OS=Eucalyptus gunnii GN=CAD2 PE=2 SV=1

 Score =  588 bits (1516), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 289/356 (81%), Positives = 323/356 (90%)

Query: 1   MGSLDTERATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGM 60
           MGSL+ ER T GWAA+DPSG+LSPYTY+LRNTG ED+YIKVL CG+CH+DIHQIKNDLGM
Sbjct: 1   MGSLEKERTTTGWAARDPSGVLSPYTYSLRNTGPEDLYIKVLSCGVCHSDIHQIKNDLGM 60

Query: 61  SNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWS 120
           S+YPMVPGHEVVGEV EVGSEV+ ++VGD+VG G++VGCCR+C PC +D EQYCNKKIW+
Sbjct: 61  SHYPMVPGHEVVGEVLEVGSEVTKYRVGDRVGTGIVVGCCRSCSPCNSDQEQYCNKKIWN 120

Query: 121 YNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQS 180
           YNDVYTDGKPTQGGFA  +VV ++FVVKIPDG+  EQAAPL+CAGVTV+SPL  FGLKQS
Sbjct: 121 YNDVYTDGKPTQGGFAGEIVVGERFVVKIPDGLESEQAAPLMCAGVTVYSPLVRFGLKQS 180

Query: 181 GLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQE 240
           GLRGGILGLGGVGHMGV IAKAMGHHVTVISSSDKKR EA+EHLGAD YLVSSD   M+E
Sbjct: 181 GLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKRTEALEHLGADAYLVSSDENGMKE 240

Query: 241 AADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFI 300
           A DSLDYI DT+P  HPLEPYL+LLKLDGKLILTGVIN P+QF++PMVMLGRK+ITGSFI
Sbjct: 241 ATDSLDYIFDTIPVVHPLEPYLALLKLDGKLILTGVINAPLQFISPMVMLGRKSITGSFI 300

Query: 301 GSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGSKLD 356
           GSMKET+EMLEFC+EKG+TS IEVIKMDYVN A ERLEKNDVRYRFVVDV GSKLD
Sbjct: 301 GSMKETEEMLEFCKEKGLTSQIEVIKMDYVNTALERLEKNDVRYRFVVDVVGSKLD 356

Involved in lignin biosynthesis. Catalyzes the final step specific for the production of lignin monomers, like coniferyl alcohol, sinapyl alcohol and 4-coumaryl alcohol.

Eucalyptus gunnii (taxid: 3933)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 9

EC: 5

>sp|P42495|CADH1_ARACO Probable cinnamyl alcohol dehydrogenase 1 OS=Aralia cordata GN=CAD1 PE=2 SV=1

 Score =  584 bits (1506), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 304/357 (85%), Positives = 332/357 (92%), Gaps = 1/357 (0%)

Query: 1   MGSLDTERATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGM 60
           MGSL+ ER T GWAA+DPSG+LSPYTYTLR TG EDV+IK++YCGICHTDIHQIKNDLG 
Sbjct: 1   MGSLEAERKTTGWAARDPSGVLSPYTYTLRETGPEDVFIKIIYCGICHTDIHQIKNDLGA 60

Query: 61  SNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWS 120
           SNYPMVPGHEVVGEV EVGS+V+ FKVGD VG G +VGCC+ CRPC+ADVEQYCNKKIWS
Sbjct: 61  SNYPMVPGHEVVGEVVEVGSDVTKFKVGDCVGDGTIVGCCKTCRPCKADVEQYCNKKIWS 120

Query: 121 YNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQ- 179
           YNDVYTDGKPTQGGF+  MVVDQKFVVKIPDGMA EQAAPLLCAGVTV+SPL+HFGLK+ 
Sbjct: 121 YNDVYTDGKPTQGGFSGHMVVDQKFVVKIPDGMAPEQAAPLLCAGVTVYSPLTHFGLKEI 180

Query: 180 SGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQ 239
           SGLRGGILGLGGVGHMGV +AKAMGHHVTVISSSDKK+ EA++HLGAD YLVSSDAT+MQ
Sbjct: 181 SGLRGGILGLGGVGHMGVKLAKAMGHHVTVISSSDKKKEEAIDHLGADAYLVSSDATQMQ 240

Query: 240 EAADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSF 299
           EAADSLDYIIDTVP  HPLEPYLSLLKLDGKLIL GVINTP+QF++PMVMLGRKAITGSF
Sbjct: 241 EAADSLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVINTPLQFISPMVMLGRKAITGSF 300

Query: 300 IGSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGSKLD 356
           IGSMKET+EML+FC EKG+TS IEV+KMDY+N AFERLEKNDVRYRFVVDVAGSKLD
Sbjct: 301 IGSMKETEEMLDFCNEKGITSTIEVVKMDYINTAFERLEKNDVRYRFVVDVAGSKLD 357

Involved in lignin biosynthesis. Catalyzes the final step specific for the production of lignin monomers, like coniferyl alcohol, sinapyl alcohol and 4-coumaryl alcohol.

Aralia cordata (taxid: 29746)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 9

EC: 5

>sp|P50746|CADH_EUCBO Probable cinnamyl alcohol dehydrogenase OS=Eucalyptus botryoides GN=CAD1 PE=3 SV=1

 Score =  580 bits (1494), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 289/356 (81%), Positives = 322/356 (90%), Gaps = 1/356 (0%)

Query: 1   MGSLDTERATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGM 60
           MGSL+ ER T GWAA+DPSG+LSPYTY+LRNTG ED+YIKVL CGICH+DIHQIKNDLGM
Sbjct: 1   MGSLEKERTTTGWAARDPSGVLSPYTYSLRNTGPEDLYIKVLSCGICHSDIHQIKNDLGM 60

Query: 61  SNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWS 120
           S+YPMVPGHEVVGEV EVGSEV+ ++VGD+VG G++VGCCR+C PC +D EQYCNKKIW+
Sbjct: 61  SHYPMVPGHEVVGEVLEVGSEVTKYRVGDRVGTGIVVGCCRSCGPCNSDQEQYCNKKIWN 120

Query: 121 YNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQS 180
           YNDVYTDGKPTQGGFA  +VV Q+FVVKIPDG+  EQ A ++CAGVTV+SPL  FGLKQS
Sbjct: 121 YNDVYTDGKPTQGGFAGEIVVGQRFVVKIPDGLESEQDA-VMCAGVTVYSPLVRFGLKQS 179

Query: 181 GLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQE 240
           GLRGGILGLGGVGHMGV IAKAMGHHVTVISSSDKKR EA+EHLGAD YLVSSD   M+E
Sbjct: 180 GLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKRTEALEHLGADAYLVSSDENGMKE 239

Query: 241 AADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFI 300
           A DSLDYI DT+P  HPLEPYL+LLKLDGKLILTGVIN P+QF++PMVMLGRK+ITGSFI
Sbjct: 240 ATDSLDYIFDTIPVVHPLEPYLALLKLDGKLILTGVINAPLQFISPMVMLGRKSITGSFI 299

Query: 301 GSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGSKLD 356
           GSMKET+EMLEFC+EKG+TS IEVIKMDYVN A ERLEKNDVRYRFVVDVAGSKLD
Sbjct: 300 GSMKETEEMLEFCKEKGLTSQIEVIKMDYVNTALERLEKNDVRYRFVVDVAGSKLD 355

Involved in lignin biosynthesis. Catalyzes the final step specific for the production of lignin monomers, like coniferyl alcohol, sinapyl alcohol and 4-coumaryl alcohol.

Eucalyptus botryoides (taxid: 33130)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 9

EC: 5

>sp|P31656|CADH_MEDSA Probable cinnamyl alcohol dehydrogenase OS=Medicago sativa GN=CAD2 PE=1 SV=1

 Score =  578 bits (1490), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 287/357 (80%), Positives = 326/357 (91%), Gaps = 1/357 (0%)

Query: 1   MGSLDT-ERATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLG 59
           MGS++  ER T+G AAKDPSGIL+PYTYTLRNTG +DVYIK+ YCG+CH+D+HQIKNDLG
Sbjct: 1   MGSIEAAERTTVGLAAKDPSGILTPYTYTLRNTGPDDVYIKIHYCGVCHSDLHQIKNDLG 60

Query: 60  MSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIW 119
           MSNYPMVPGHEVVGEV EVGS V+ FKVG+ VGVG+LVGCC++CR C++++EQYCNKKIW
Sbjct: 61  MSNYPMVPGHEVVGEVLEVGSNVTRFKVGEIVGVGLLVGCCKSCRACDSEIEQYCNKKIW 120

Query: 120 SYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQ 179
           SYNDVYTDGK TQGGFAES VV+QKFVVKIP+G+A EQ APLLCAGVTV+SPLSHFGLK 
Sbjct: 121 SYNDVYTDGKITQGGFAESTVVEQKFVVKIPEGLAPEQVAPLLCAGVTVYSPLSHFGLKT 180

Query: 180 SGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQ 239
            GLRGGILGLGGVGHMGV +AKA+GHHVTVISSSDKK+ EA+E LGAD YLVSSD   MQ
Sbjct: 181 PGLRGGILGLGGVGHMGVKVAKALGHHVTVISSSDKKKKEALEDLGADNYLVSSDTVGMQ 240

Query: 240 EAADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSF 299
           EAADSLDYIIDTVP  HPLEPYLSLLK+DGKLIL GVINTP+QF+TPMVMLGRK+ITGSF
Sbjct: 241 EAADSLDYIIDTVPVGHPLEPYLSLLKIDGKLILMGVINTPLQFVTPMVMLGRKSITGSF 300

Query: 300 IGSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGSKLD 356
           +GS+KET+EMLEF +EKG+TSMIE++ MDY+NKAFERLEKNDVRYRFVVDV GSK +
Sbjct: 301 VGSVKETEEMLEFWKEKGLTSMIEIVTMDYINKAFERLEKNDVRYRFVVDVKGSKFE 357

This protein catalyzes the final step in a branch of phenylpropanoid synthesis specific for production of lignin monomers. It acts on coniferyl-, sinapyl-, 4-coumaryl- and cinnamyl-alcohol.

Medicago sativa (taxid: 3879)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 9

EC: 5

>sp|Q2KNL5|CADH1_OCIBA Cinnamyl alcohol dehydrogenase 1 OS=Ocimum basilicum GN=CAD1 PE=1 SV=1

 Score =  576 bits (1485), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 296/355 (83%), Positives = 327/355 (92%)

Query: 1   MGSLDTERATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGM 60
           MGSL+ ER T+GWAA+DPSG+LSPY YTLRNTG +DVY++V+ CGICHTD+HQIKNDLGM
Sbjct: 1   MGSLEVERKTVGWAARDPSGVLSPYEYTLRNTGPQDVYVEVMCCGICHTDVHQIKNDLGM 60

Query: 61  SNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWS 120
           SNYPMVPGHEVVGEV EVGSEV+ F+ GD VGVG +VG C NCRPC +D+EQYCNKKIWS
Sbjct: 61  SNYPMVPGHEVVGEVVEVGSEVTKFRAGDVVGVGCIVGSCGNCRPCNSDIEQYCNKKIWS 120

Query: 121 YNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQS 180
           YNDVY DGKPTQGGFA +MVVDQKFVVKIPDGMA EQAAPLLCAGVTV+SPL+HFGLKQS
Sbjct: 121 YNDVYPDGKPTQGGFAGAMVVDQKFVVKIPDGMAPEQAAPLLCAGVTVYSPLNHFGLKQS 180

Query: 181 GLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQE 240
           GLRGGILGLGGVGHMGV IAKAMGHHVTVISSSDKKR EA++HLGAD YLVSSDA RMQE
Sbjct: 181 GLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKRAEALDHLGADDYLVSSDAARMQE 240

Query: 241 AADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFI 300
           AADSLDYIIDTVP  HPLEPYLSLLK+DGKLIL GV+NTP+QF++PMVMLGRK+ITGSFI
Sbjct: 241 AADSLDYIIDTVPVFHPLEPYLSLLKIDGKLILMGVVNTPLQFVSPMVMLGRKSITGSFI 300

Query: 301 GSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGSKL 355
           GSMKE  EMLEFC+EK ++S IE++KMDY+N AFERLEKNDVRYRFVVDVAGSKL
Sbjct: 301 GSMKELAEMLEFCKEKDLSSTIEIVKMDYINTAFERLEKNDVRYRFVVDVAGSKL 355

Involved in the production of citral, a mixture of geranial and neral with a strong lemony scent. Reversibly oxidizes geraniol to produce geranial at half the efficiency compared with its activity with cinnamyl alcohol. Does not use nerol and neral as substrates.

Ocimum basilicum (taxid: 39350)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 9

EC: 5

>sp|Q42726|CADH1_EUCGU Probable cinnamyl alcohol dehydrogenase 1 OS=Eucalyptus gunnii GN=CAD1 PE=3 SV=1

 Score =  576 bits (1484), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 285/356 (80%), Positives = 320/356 (89%), Gaps = 2/356 (0%)

Query: 1   MGSLDTERATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGM 60
           MGSL+ ER T GWAA+DPSG+LSPYTY+LRNTG ED+YIKVL CGICH+DIHQIKNDLGM
Sbjct: 1   MGSLEKERTTTGWAARDPSGVLSPYTYSLRNTGPEDLYIKVLSCGICHSDIHQIKNDLGM 60

Query: 61  SNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWS 120
           S+YPMVPGHEVVGEV EVGSEV+ ++VGD+VG G++VGCCR+C PC +D EQYCNKKIW+
Sbjct: 61  SHYPMVPGHEVVGEVLEVGSEVTKYRVGDRVGTGIVVGCCRSCSPCNSDQEQYCNKKIWN 120

Query: 121 YNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQS 180
           YNDVYTDGKPTQGGFA  +VV ++FVVKIPDG+  EQAAPL+CAGVTV+ PL  FGLKQS
Sbjct: 121 YNDVYTDGKPTQGGFAGEIVVGERFVVKIPDGLESEQAAPLMCAGVTVYRPLVRFGLKQS 180

Query: 181 GLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQE 240
           GLRGGILGLGGVGHMGV IAKAMGHHVTVISSSDKKR EA+EHLGAD YLVSSD   M+E
Sbjct: 181 GLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKRTEALEHLGADAYLVSSDENGMKE 240

Query: 241 AADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFI 300
           A DSLDY+ DT+P  HPLEPYL+LLKLDGKLILTGVIN P+QF++PMVML  ++ITGSFI
Sbjct: 241 ATDSLDYVFDTIPVVHPLEPYLALLKLDGKLILTGVINAPLQFISPMVML--ESITGSFI 298

Query: 301 GSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGSKLD 356
           GSMKET+EMLEFC+EKG+TS IEVIKMDYVN A ERLEKNDVRYRFVVDV GSKLD
Sbjct: 299 GSMKETEEMLEFCKEKGLTSQIEVIKMDYVNTALERLEKNDVRYRFVVDVVGSKLD 354

Involved in lignin biosynthesis. Catalyzes the final step specific for the production of lignin monomers, like coniferyl alcohol, sinapyl alcohol and 4-coumaryl alcohol.

Eucalyptus gunnii (taxid: 3933)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 9

EC: 5

>sp|P30359|CADH1_TOBAC Probable cinnamyl alcohol dehydrogenase 1 OS=Nicotiana tabacum GN=CAD14 PE=1 SV=1

 Score =  575 bits (1481), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 295/356 (82%), Positives = 329/356 (92%)

Query: 1   MGSLDTERATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGM 60
           MG L+ E+ TIGWAA+DPSG+LSPYTYTLRNTG EDV +KVLYCG+CHTD+HQ+KNDLGM
Sbjct: 1   MGGLEVEKTTIGWAARDPSGVLSPYTYTLRNTGPEDVEVKVLYCGLCHTDLHQVKNDLGM 60

Query: 61  SNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWS 120
           SNYP+VPGHEVVGEV EVG +VS FKVGD VGVG+LVG CRNC PC+ D+EQYCNKKIW+
Sbjct: 61  SNYPLVPGHEVVGEVVEVGPDVSKFKVGDTVGVGLLVGSCRNCGPCKRDIEQYCNKKIWN 120

Query: 121 YNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQS 180
            NDVYTDGKPTQGGFA+SMVVDQKFVVKIP+GMA EQAAPLLCAG+TV+SPL+HFG KQS
Sbjct: 121 CNDVYTDGKPTQGGFAKSMVVDQKFVVKIPEGMAPEQAAPLLCAGITVYSPLNHFGFKQS 180

Query: 181 GLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQE 240
           GLRGGILGLGGVGHMGV IAKAMGHHVTVISSS+KKR EA+EHLGAD YLVSSD  +MQE
Sbjct: 181 GLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKRQEALEHLGADDYLVSSDTDKMQE 240

Query: 241 AADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFI 300
           A+DSLDYIIDTVP  HPLEPYLSLLK+DGKLIL GVINTP+QF++PMVMLGRK+ITGSFI
Sbjct: 241 ASDSLDYIIDTVPVGHPLEPYLSLLKIDGKLILMGVINTPLQFISPMVMLGRKSITGSFI 300

Query: 301 GSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGSKLD 356
           GSMKET+EML+FC+EKGVTS IE++KMDY+N A ERLEKNDVRYRFVVDV GSKLD
Sbjct: 301 GSMKETEEMLDFCKEKGVTSQIEIVKMDYINTAMERLEKNDVRYRFVVDVIGSKLD 356

Involved in lignin biosynthesis. Catalyzes the final step specific for the production of lignin monomers, like coniferyl alcohol, sinapyl alcohol and 4-coumaryl alcohol.

Nicotiana tabacum (taxid: 4097)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 9

EC: 5

>sp|P30360|CADH2_TOBAC Probable cinnamyl alcohol dehydrogenase 2 OS=Nicotiana tabacum GN=CAD19 PE=1 SV=1

 Score =  573 bits (1478), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 289/356 (81%), Positives = 325/356 (91%)

Query: 1   MGSLDTERATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGM 60
           MGSLD E++ IGWAA+DPSG+LSPYTYTLRNTG EDV +KVLYCG+CH+D+HQ+KNDLGM
Sbjct: 1   MGSLDVEKSAIGWAARDPSGLLSPYTYTLRNTGPEDVQVKVLYCGLCHSDLHQVKNDLGM 60

Query: 61  SNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWS 120
           SNYP+VPGHEVVG+V EVG++VS FKVGD VGVG+LVG CRNC PC+ ++EQYCNKKIW+
Sbjct: 61  SNYPLVPGHEVVGKVVEVGADVSKFKVGDTVGVGLLVGSCRNCGPCKREIEQYCNKKIWN 120

Query: 121 YNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQS 180
            NDVYTDGKPTQGGFA SMVVDQ FVVKIP+GMA EQAAPLLCAG+TV+SP +HFG  QS
Sbjct: 121 CNDVYTDGKPTQGGFANSMVVDQNFVVKIPEGMAPEQAAPLLCAGITVYSPFNHFGFNQS 180

Query: 181 GLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQE 240
           G RGGILGLGGVGHMGV IAKAMGHHVTVISSS+KKR EA+EHLGAD YLVSSD  +MQE
Sbjct: 181 GFRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKRQEALEHLGADDYLVSSDTDKMQE 240

Query: 241 AADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFI 300
           AADSLDYIIDTVP  HPLE YLSLLK+DGKLIL GVINTP+QF++PMVMLGRK+ITGSFI
Sbjct: 241 AADSLDYIIDTVPVGHPLELYLSLLKIDGKLILIGVINTPLQFISPMVMLGRKSITGSFI 300

Query: 301 GSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGSKLD 356
           GSMKET+EML+FC+EKGVTS IE++KMDY+N A ERLEKNDV YRFVVDVAGSKLD
Sbjct: 301 GSMKETEEMLDFCKEKGVTSQIEIVKMDYINTAMERLEKNDVSYRFVVDVAGSKLD 356

Involved in lignin biosynthesis. Catalyzes the final step specific for the production of lignin monomers, like coniferyl alcohol, sinapyl alcohol and 4-coumaryl alcohol.

Nicotiana tabacum (taxid: 4097)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 9

EC: 5

>sp|P31657|CADH_POPDE Probable cinnamyl alcohol dehydrogenase OS=Populus deltoides PE=2 SV=2

 Score =  553 bits (1425), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 298/355 (83%), Positives = 328/355 (92%)

Query: 1   MGSLDTERATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGM 60
           MGSL+TER  +GWAA D +G L+PYTY+LR+TG EDV+IKV+ CG+CHTDIHQIKNDLGM
Sbjct: 1   MGSLETERKIVGWAATDSTGHLAPYTYSLRDTGPEDVFIKVISCGVCHTDIHQIKNDLGM 60

Query: 61  SNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWS 120
           S+YPMVPGHEVVGEV EVGS+V+ FKVGD VGVGV+VG C+NC PC++++EQYCNKKIWS
Sbjct: 61  SHYPMVPGHEVVGEVVEVGSDVTRFKVGDVVGVGVIVGSCKNCHPCKSEIEQYCNKKIWS 120

Query: 121 YNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQS 180
           YNDVYTDGKPTQGGFAESMVV QKFVV+IPDGM+ EQAAPLLCAG+TV+SPL HFGLKQS
Sbjct: 121 YNDVYTDGKPTQGGFAESMVVHQKFVVRIPDGMSPEQAAPLLCAGLTVYSPLKHFGLKQS 180

Query: 181 GLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQE 240
           GLRGGILGLGGVGHMGV IAKAMGHHVTVISSSDKKR EAMEHLGAD+YLVSSD   MQ+
Sbjct: 181 GLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKREEAMEHLGADEYLVSSDVESMQK 240

Query: 241 AADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFI 300
           AAD LDYIIDTVP  HPLEPYLSLLKLDGKLIL GVIN P+QF+TPMVMLGRK+ITGSFI
Sbjct: 241 AADQLDYIIDTVPVVHPLEPYLSLLKLDGKLILMGVINAPLQFVTPMVMLGRKSITGSFI 300

Query: 301 GSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGSKL 355
           GSMKET+EMLEFC+EKGV SMIEVIKMDY+N AFERLEKNDVRYRFVVDVAGSKL
Sbjct: 301 GSMKETEEMLEFCKEKGVASMIEVIKMDYINTAFERLEKNDVRYRFVVDVAGSKL 355

Involved in lignin biosynthesis. Catalyzes the final step specific for the production of lignin monomers, like coniferyl alcohol, sinapyl alcohol and 4-coumaryl alcohol.

Populus deltoides (taxid: 3696)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 9

EC: 5

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	357
122894098	357	cinnamyl alcohol dehydrogenase [Citrus s	1.0	1.0	1.0	0.0
94962377	358	putative cinnamyl alcohol dehydrogenase	0.994	0.991	0.808	1e-175
340396212	298	putative cinnamyl alcohol dehydrogenase	0.834	1.0	1.0	1e-173
166865124	357	cinnamyl alcohol dehydrogenase [Gossypiu	0.997	0.997	0.848	1e-170
255555277	357	alcohol dehydrogenase, putative [Ricinus	1.0	1.0	0.862	1e-169
194454813	357	cinnamyl alcohol dehydrogenase [Gossypiu	0.997	0.997	0.845	1e-169
356536170	359	PREDICTED: probable cinnamyl alcohol deh	0.994	0.988	0.830	1e-168
356575670	357	PREDICTED: probable cinnamyl alcohol deh	0.994	0.994	0.830	1e-168
225428916	357	PREDICTED: probable cinnamyl alcohol deh	0.997	0.997	0.865	1e-168
255646515	357	unknown [Glycine max]	0.994	0.994	0.825	1e-167

>gi|122894098|gb|ABM67695.1| cinnamyl alcohol dehydrogenase [Citrus sinensis]

 Score =  738 bits (1905), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 357/357 (100%), Positives = 357/357 (100%)

Query: 1   MGSLDTERATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGM 60
           MGSLDTERATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGM
Sbjct: 1   MGSLDTERATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGM 60

Query: 61  SNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWS 120
           SNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWS
Sbjct: 61  SNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWS 120

Query: 121 YNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQS 180
           YNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQS
Sbjct: 121 YNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQS 180

Query: 181 GLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQE 240
           GLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQE
Sbjct: 181 GLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQE 240

Query: 241 AADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFI 300
           AADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFI
Sbjct: 241 AADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFI 300

Query: 301 GSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGSKLDP 357
           GSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGSKLDP
Sbjct: 301 GSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGSKLDP 357

Source: Citrus sinensis

Species: Citrus sinensis

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|94962377|gb|ABF48495.1| putative cinnamyl alcohol dehydrogenase [Linum usitatissimum]

 Score =  619 bits (1597), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 287/355 (80%), Positives = 328/355 (92%)

Query: 1   MGSLDTERATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGM 60
           MGS++  R  +GWAA DPSG+L+P T+TLRNTG EDV+IKV+ CGICHTDIHQ+KN LGM
Sbjct: 1   MGSMEKGRTIVGWAATDPSGVLAPQTFTLRNTGPEDVFIKVMCCGICHTDIHQVKNHLGM 60

Query: 61  SNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWS 120
           S YPMVPGHE+VGEV EVGSEV+ FK GD VGVG+LVGCCR+CR C+AD+EQYCNKKIWS
Sbjct: 61  SRYPMVPGHEMVGEVLEVGSEVTKFKTGDIVGVGLLVGCCRSCRACDADIEQYCNKKIWS 120

Query: 121 YNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQS 180
           YNDVYTDG PTQGGFAESMVVDQKFVVKIP+GM+ EQAAPLLCAGVTV+SPL+HFGLK+S
Sbjct: 121 YNDVYTDGNPTQGGFAESMVVDQKFVVKIPEGMSPEQAAPLLCAGVTVYSPLNHFGLKKS 180

Query: 181 GLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQE 240
           G++G ILGLGGVGHMGV IAKAMGHHVTVISSSDKK++EA++HLGAD+YLVSSD+  M++
Sbjct: 181 GMKGAILGLGGVGHMGVKIAKAMGHHVTVISSSDKKKIEAVDHLGADEYLVSSDSATMEQ 240

Query: 241 AADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFI 300
           AADS DYIIDTVP NHPLEPYLSLLK+DGKLIL GVINTP+QF++PMVMLGRK ITGSFI
Sbjct: 241 AADSFDYIIDTVPVNHPLEPYLSLLKVDGKLILMGVINTPLQFISPMVMLGRKVITGSFI 300

Query: 301 GSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGSKL 355
           GSMKET+EMLEFC+++G++SMIEV+KMDYVN AFERLEKNDVRYRFVVDVAGS L
Sbjct: 301 GSMKETEEMLEFCKDEGLSSMIEVVKMDYVNTAFERLEKNDVRYRFVVDVAGSDL 355

Source: Linum usitatissimum

Species: Linum usitatissimum

Genus: Linum

Family: Linaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|340396212|gb|AEK32396.1| putative cinnamyl alcohol dehydrogenase [Citrus sinensis]

 Score =  613 bits (1581), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 298/298 (100%), Positives = 298/298 (100%)

Query: 60  MSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIW 119
           MSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIW
Sbjct: 1   MSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIW 60

Query: 120 SYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQ 179
           SYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQ
Sbjct: 61  SYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQ 120

Query: 180 SGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQ 239
           SGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQ
Sbjct: 121 SGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQ 180

Query: 240 EAADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSF 299
           EAADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSF
Sbjct: 181 EAADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSF 240

Query: 300 IGSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGSKLDP 357
           IGSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGSKLDP
Sbjct: 241 IGSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGSKLDP 298

Source: Citrus sinensis

Species: Citrus sinensis

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|166865124|gb|ABZ01817.1| cinnamyl alcohol dehydrogenase [Gossypium hirsutum]

 Score =  602 bits (1553), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 302/356 (84%), Positives = 329/356 (92%)

Query: 1   MGSLDTERATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGM 60
           MGSL+TER T GWAA+DPSG+LSPYTYTLRNTG EDV++KV+ CGICHTD+HQ KNDLGM
Sbjct: 1   MGSLETERTTTGWAARDPSGVLSPYTYTLRNTGPEDVFVKVMCCGICHTDLHQAKNDLGM 60

Query: 61  SNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWS 120
           SNYPMVPGHEVVGEV EVGS+VS F+VGD VGVG LVGCCRNCRPC++D EQYC KKIWS
Sbjct: 61  SNYPMVPGHEVVGEVLEVGSDVSKFRVGDIVGVGCLVGCCRNCRPCDSDNEQYCLKKIWS 120

Query: 121 YNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQS 180
           YNDVYTDGKPTQGGFA SMVVDQKFVVKIP+GMA EQ APLLCAGVTV+SPL+HFGL  S
Sbjct: 121 YNDVYTDGKPTQGGFAGSMVVDQKFVVKIPEGMAPEQVAPLLCAGVTVYSPLNHFGLMGS 180

Query: 181 GLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQE 240
           GLRGGILGLGGVGHMGV IAKAMGHHVTVISSSDKK+VEA+EHLGAD YLVSSDA  MQ+
Sbjct: 181 GLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKKVEALEHLGADDYLVSSDAEGMQK 240

Query: 241 AADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFI 300
           AADSLDYIIDTVP  HPLEPYLSLLK DGKLILTGVINTP+QF++PMVMLGRK+ITGSFI
Sbjct: 241 AADSLDYIIDTVPVFHPLEPYLSLLKFDGKLILTGVINTPLQFVSPMVMLGRKSITGSFI 300

Query: 301 GSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGSKLD 356
           GSMKET+EML FC+E+ +TSMIEV+KMDY+N A ERLEKNDVRYRFVVDVAGSKLD
Sbjct: 301 GSMKETEEMLNFCKEENLTSMIEVVKMDYINTAMERLEKNDVRYRFVVDVAGSKLD 356

Source: Gossypium hirsutum

Species: Gossypium hirsutum

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255555277|ref|XP_002518675.1| alcohol dehydrogenase, putative [Ricinus communis] gi|223542056|gb|EEF43600.1| alcohol dehydrogenase, putative [Ricinus communis]

 Score =  602 bits (1551), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 308/357 (86%), Positives = 336/357 (94%)

Query: 1   MGSLDTERATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGM 60
           MGSL+TER  +GWAA+DPSGILSPYTYTLRNTG+EDV +KV+YCGICHTD+HQ KNDLGM
Sbjct: 1   MGSLETERTIVGWAARDPSGILSPYTYTLRNTGSEDVVLKVIYCGICHTDLHQAKNDLGM 60

Query: 61  SNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWS 120
           S YPMVPGHEVVGEV EVGS V+ F+VGD VGVGVLVGCCRNC PC  D+EQYCNKKIWS
Sbjct: 61  SRYPMVPGHEVVGEVVEVGSGVTKFRVGDTVGVGVLVGCCRNCMPCNKDIEQYCNKKIWS 120

Query: 121 YNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQS 180
           YNDVY+DGKPTQGGFA+SMVVDQKFVVKIPDGMA EQAAPLLCAGVTV+SPLSHFGLK+S
Sbjct: 121 YNDVYSDGKPTQGGFAQSMVVDQKFVVKIPDGMAPEQAAPLLCAGVTVYSPLSHFGLKKS 180

Query: 181 GLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQE 240
           GLRGGILGLGGVGHMGV IAKAMGHHVTVISSSDKKRVEA++HLGAD+YLVSSD T MQ+
Sbjct: 181 GLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKRVEALDHLGADEYLVSSDETSMQQ 240

Query: 241 AADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFI 300
           A DSLDYIIDTVPANHPLEPYLSLLKLDGKLIL GVINTP+QF++PM+MLGRK I+GSFI
Sbjct: 241 ATDSLDYIIDTVPANHPLEPYLSLLKLDGKLILLGVINTPLQFVSPMLMLGRKIISGSFI 300

Query: 301 GSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGSKLDP 357
           GS+KET+EMLEFC+E G+TSMIEVIKMDYVN AFERLEKNDVRYRFVVDVAGSKL+P
Sbjct: 301 GSIKETEEMLEFCKENGLTSMIEVIKMDYVNTAFERLEKNDVRYRFVVDVAGSKLEP 357

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|194454813|gb|ACF71455.1| cinnamyl alcohol dehydrogenase [Gossypium hirsutum]

 Score =  600 bits (1546), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 301/356 (84%), Positives = 328/356 (92%)

Query: 1   MGSLDTERATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGM 60
           MG L+TER T GWAA+DPSG+LSPYTYTLR+TG EDV++KV+ CGICHTD+HQ KNDLGM
Sbjct: 1   MGGLETERTTTGWAARDPSGVLSPYTYTLRSTGPEDVFVKVMCCGICHTDLHQAKNDLGM 60

Query: 61  SNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWS 120
           SNYPMVPGHEVVGEV EVGS+VS F+VGD VGVG +VGCCRNCRPC++D EQYC KKIWS
Sbjct: 61  SNYPMVPGHEVVGEVLEVGSDVSKFRVGDIVGVGCIVGCCRNCRPCDSDNEQYCLKKIWS 120

Query: 121 YNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQS 180
           YNDVYTDGKPTQGGFA SMVVDQKFVV IP+GMA EQ APLLCAGVTV+SPL+HFGL  S
Sbjct: 121 YNDVYTDGKPTQGGFAGSMVVDQKFVVNIPEGMAPEQVAPLLCAGVTVYSPLNHFGLMGS 180

Query: 181 GLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQE 240
           GLRGGILGLGGVGHMGV IAKAMGHHVTVISSSDKK+VEA+EHLGAD YLVSSDA  MQ+
Sbjct: 181 GLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKKVEALEHLGADDYLVSSDAEGMQK 240

Query: 241 AADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFI 300
           AADSLDYIIDTVP  HPLEPYLSLLKLDGKLILTGVINTP+QF+TPMVMLGRK+ITGSFI
Sbjct: 241 AADSLDYIIDTVPVFHPLEPYLSLLKLDGKLILTGVINTPLQFVTPMVMLGRKSITGSFI 300

Query: 301 GSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGSKLD 356
           GSMKET+EML FC+EK +TSMIEV+KMDY+N A ERLEKNDVRYRFVVDVAGSKLD
Sbjct: 301 GSMKETEEMLNFCKEKNLTSMIEVVKMDYINTAMERLEKNDVRYRFVVDVAGSKLD 356

Source: Gossypium hirsutum

Species: Gossypium hirsutum

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356536170|ref|XP_003536612.1| PREDICTED: probable cinnamyl alcohol dehydrogenase-like [Glycine max]

 Score =  598 bits (1543), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 295/355 (83%), Positives = 330/355 (92%)

Query: 1   MGSLDTERATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGM 60
           MGSL+ ER T+G AA+DPSGILSPYTY LRNTG +DVYIKV YCGICH+D+HQIKNDLGM
Sbjct: 1   MGSLEAERTTVGLAARDPSGILSPYTYNLRNTGPDDVYIKVHYCGICHSDLHQIKNDLGM 60

Query: 61  SNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWS 120
           SNYPMVPGHEVVGEV EVGS VS F+VG+ VGVG+LVGCC+NC+PC+ D+E YC+KKIWS
Sbjct: 61  SNYPMVPGHEVVGEVLEVGSNVSRFRVGELVGVGLLVGCCKNCQPCQQDIENYCSKKIWS 120

Query: 121 YNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQS 180
           YNDVY DGKPTQGGFAE+M+V+QKFVVKIP+G+A EQ APLLCAGVTV+SPL HFGLK+S
Sbjct: 121 YNDVYVDGKPTQGGFAETMIVEQKFVVKIPEGLAPEQVAPLLCAGVTVYSPLVHFGLKES 180

Query: 181 GLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQE 240
           GLRGGILGLGGVGHMGV IAKA+GHHVTVISSSDKK+ EA+EHLGADQYLVSSDAT MQE
Sbjct: 181 GLRGGILGLGGVGHMGVKIAKALGHHVTVISSSDKKKQEALEHLGADQYLVSSDATAMQE 240

Query: 241 AADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFI 300
           AADSLDYIIDTVP  HPLEPYLSLLKLDGKLIL GVINTP+QF++PMVMLGRK+ITGSFI
Sbjct: 241 AADSLDYIIDTVPVGHPLEPYLSLLKLDGKLILMGVINTPLQFVSPMVMLGRKSITGSFI 300

Query: 301 GSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGSKL 355
           GSMKET+EMLEF +EKG++SMIE++ MDY+NKAFERLEKNDVRYRFVVDV GSKL
Sbjct: 301 GSMKETEEMLEFWKEKGLSSMIEMVNMDYINKAFERLEKNDVRYRFVVDVKGSKL 355

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356575670|ref|XP_003555961.1| PREDICTED: probable cinnamyl alcohol dehydrogenase-like [Glycine max]

 Score =  597 bits (1540), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 295/355 (83%), Positives = 330/355 (92%)

Query: 1   MGSLDTERATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGM 60
           MGSL+ ER T+G AA+DPSGILSPYTY LRNTG +DVYIKV YCGICH+D+HQIKNDLGM
Sbjct: 1   MGSLEAERTTVGLAARDPSGILSPYTYNLRNTGPDDVYIKVHYCGICHSDLHQIKNDLGM 60

Query: 61  SNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWS 120
           SNYPMVPGHEVVGEV EVGS+VS F+VG+ VGVG+LVGCC+NC+PC+ D+E YC+KKIWS
Sbjct: 61  SNYPMVPGHEVVGEVLEVGSDVSRFRVGELVGVGLLVGCCKNCQPCQQDIENYCSKKIWS 120

Query: 121 YNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQS 180
           YNDVY DGKPTQGGFAE+MVV+QKFVVKIP+G+A EQ APLLCAGVTV+SPL HFGLK+S
Sbjct: 121 YNDVYVDGKPTQGGFAETMVVEQKFVVKIPEGLAPEQVAPLLCAGVTVYSPLVHFGLKES 180

Query: 181 GLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQE 240
           GLRGGILGLGGVGHMGV IAKA+GHHVTVISSSDKK+ EA+EHLGADQYLVSSD T MQE
Sbjct: 181 GLRGGILGLGGVGHMGVKIAKALGHHVTVISSSDKKKQEALEHLGADQYLVSSDVTAMQE 240

Query: 241 AADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFI 300
           AADSLDYIIDTVP  HPLEPYLSLLKLDGKLIL GVINTP+QF++PMVMLGR++ITGSFI
Sbjct: 241 AADSLDYIIDTVPVGHPLEPYLSLLKLDGKLILMGVINTPLQFVSPMVMLGRRSITGSFI 300

Query: 301 GSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGSKL 355
           GSMKET+EMLEF +EKG++SMIEV+ MDY+NKAFERLEKNDVRYRFVVDV GSKL
Sbjct: 301 GSMKETEEMLEFWKEKGLSSMIEVVNMDYINKAFERLEKNDVRYRFVVDVKGSKL 355

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225428916|ref|XP_002285406.1| PREDICTED: probable cinnamyl alcohol dehydrogenase 1 [Vitis vinifera] gi|296090439|emb|CBI40258.3| unnamed protein product [Vitis vinifera]

 Score =  596 bits (1537), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 308/356 (86%), Positives = 336/356 (94%)

Query: 1   MGSLDTERATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGM 60
           MGSL+TE+  IGWAA+DPSG+LSPYTYTLRNTG EDV IKV YCGICHTD+HQIKNDLGM
Sbjct: 1   MGSLETEKTIIGWAARDPSGVLSPYTYTLRNTGPEDVLIKVTYCGICHTDLHQIKNDLGM 60

Query: 61  SNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWS 120
           S+YPMVPGHEVVGEV EVGS+VS  +VGD VGVGV+VGCCR+CRPC++D+EQYC+KKIWS
Sbjct: 61  SHYPMVPGHEVVGEVVEVGSDVSKVRVGDCVGVGVIVGCCRSCRPCQSDIEQYCSKKIWS 120

Query: 121 YNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQS 180
           YNDVYTDGKPTQGGFAESM+VDQKFV+KIPDGMA EQAAPLLCAGVTV+SPLSHFGLK+S
Sbjct: 121 YNDVYTDGKPTQGGFAESMIVDQKFVLKIPDGMAPEQAAPLLCAGVTVYSPLSHFGLKKS 180

Query: 181 GLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQE 240
           GLRGGILGLGGVGHMGV IAKAMGHHVTVISSSD+KR EAM+HLGAD YLVSSD+TRMQE
Sbjct: 181 GLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSDRKREEAMDHLGADDYLVSSDSTRMQE 240

Query: 241 AADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFI 300
           AADSLDYIIDTVP  HPLEPYLSLLKLDGKLIL GVINTP+QF+TPMVMLGRK ITGSFI
Sbjct: 241 AADSLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVINTPLQFVTPMVMLGRKIITGSFI 300

Query: 301 GSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGSKLD 356
           GSMKET+EMLEFC+E G+TSMIE++KMDYVN A ERLEKNDVRYRFVVDVAGSKLD
Sbjct: 301 GSMKETEEMLEFCKENGLTSMIEMVKMDYVNTALERLEKNDVRYRFVVDVAGSKLD 356

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255646515|gb|ACU23735.1| unknown [Glycine max]

 Score =  593 bits (1529), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 293/355 (82%), Positives = 328/355 (92%)

Query: 1   MGSLDTERATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGM 60
           MGSL+ ER T+G AA+DPSGILSPYTY LRNTG +DVYIKV YCGICH+D+HQIKNDLGM
Sbjct: 1   MGSLEAERTTVGLAARDPSGILSPYTYNLRNTGPDDVYIKVHYCGICHSDLHQIKNDLGM 60

Query: 61  SNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWS 120
           SNYPMVPGHEVVGEV EVGS+VS F+VG+ VGVG+LVGCC+NC+PC+ D+E YC+KKIWS
Sbjct: 61  SNYPMVPGHEVVGEVLEVGSDVSRFRVGELVGVGLLVGCCKNCQPCQQDIENYCSKKIWS 120

Query: 121 YNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQS 180
           YNDVY DGKPTQGGF E+MVV+QKFVVKIP+G+A EQ APLLCAGVTV+SPL  FGLK+S
Sbjct: 121 YNDVYVDGKPTQGGFTETMVVEQKFVVKIPEGLAPEQVAPLLCAGVTVYSPLVRFGLKES 180

Query: 181 GLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQE 240
           GLRGGILGLGGVGHMGV IAKA+GHHVTVISSSDKK+ EA+EHLGADQYLVSSD T MQE
Sbjct: 181 GLRGGILGLGGVGHMGVKIAKALGHHVTVISSSDKKKQEALEHLGADQYLVSSDVTAMQE 240

Query: 241 AADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFI 300
           AADSLDYIIDTVP  HPLEPYLSLLKLDGKLIL GVINTP+QF++PMVMLGR++ITGSFI
Sbjct: 241 AADSLDYIIDTVPVGHPLEPYLSLLKLDGKLILMGVINTPLQFVSPMVMLGRRSITGSFI 300

Query: 301 GSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGSKL 355
           GSMKET+EMLEF +EKG++SMIEV+ MDY+NKAFERLEKNDVRYRFVVDV GSKL
Sbjct: 301 GSMKETEEMLEFWKEKGLSSMIEVVNMDYINKAFERLEKNDVRYRFVVDVKGSKL 355

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	357
TAIR|locus:2090704	365	ATCAD4 [Arabidopsis thaliana (	0.994	0.972	0.637	1.1e-121
TAIR|locus:2124311	357	CAD5 "cinnamyl alcohol dehydro	0.997	0.997	0.640	1.7e-121
UNIPROTKB|O24562	367	CAD "Probable cinnamyl alcohol	0.997	0.970	0.634	2.6e-118
UNIPROTKB|Q6ZHS4	363	CAD2 "Cinnamyl alcohol dehydro	0.997	0.980	0.623	2.1e-116
TAIR|locus:2052494	375	CAD3 "cinnamyl alcohol dehydro	0.980	0.933	0.418	8.4e-74
TAIR|locus:2136278	360	CAD9 "cinnamyl alcohol dehydro	0.988	0.980	0.407	8.4e-74
TAIR|locus:2052516	376	CAD2 "cinnamyl alcohol dehydro	0.983	0.933	0.409	6.7e-72
TAIR|locus:2005528	359	ELI3-2 "elicitor-activated gen	0.994	0.988	0.408	1.4e-69
TAIR|locus:2120968	363	CAD6 "cinnamyl alcohol dehydro	0.985	0.969	0.400	3.8e-69
TAIR|locus:2005527	357	ELI3-1 "elicitor-activated gen	0.985	0.985	0.399	3.6e-66

TAIR|locus:2090704 ATCAD4 [Arabidopsis thaliana (taxid:3702)]

 Score = 1197 (426.4 bits), Expect = 1.1e-121, P = 1.1e-121
 Identities = 227/356 (63%), Positives = 267/356 (75%)

Query:     1 MGSLDT-ERATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLG 59
             MGS++  E+  +GWAA+DPSG+LSPY+YTLR+TGA+DVYIKV+ CGICHTDIHQIKNDLG
Sbjct:     1 MGSVEAGEKKALGWAARDPSGVLSPYSYTLRSTGADDVYIKVICCGICHTDIHQIKNDLG 60

Query:    60 MSNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNCRPCEADVEQYCNKKIW 119
             MSNYPM                 S F             CC +C+PC +++EQYCNK+IW
Sbjct:    61 MSNYPMVPGHEVVGEVLEVGSDVSKFTVGDVVGVGVVVGCCGSCKPCSSELEQYCNKRIW 120

Query:   120 SYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQ 179
             SYNDVYTDGKPTQGGFA++M+V+QKFVVKIP+GMA+EQAAPLLCAGVTV+SPLSHFGL  
Sbjct:   121 SYNDVYTDGKPTQGGFADTMIVNQKFVVKIPEGMAVEQAAPLLCAGVTVYSPLSHFGLMA 180

Query:   180 SXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQ 239
             S                   AKAMGHHVTVISSSDKK+ EA+EHLGAD Y+VSSD   MQ
Sbjct:   181 SGLKGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKKEEAIEHLGADDYVVSSDPAEMQ 240

Query:   240 EAADSLDYIIDTVPANHPLEPYXXXXXXXXXXXXTGVINTPMQFLTPMVMLGRKAITGSF 299
               ADSLDYIIDTVP  HPL+PY             GVINTP+QF+TP+V+LGRK I+GSF
Sbjct:   241 RLADSLDYIIDTVPVFHPLDPYLACLKLDGKLILMGVINTPLQFVTPLVILGRKVISGSF 300

Query:   300 IGSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGSKL 355
             IGS+KET+E+L FC+EKG+TS IE +K+D +N AFERL KNDVRYRFVVDVAGS L
Sbjct:   301 IGSIKETEEVLAFCKEKGLTSTIETVKIDELNIAFERLRKNDVRYRFVVDVAGSNL 356

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0045551 "cinnamyl-alcohol dehydrogenase activity" evidence=IDA;IMP

GO:0009809 "lignin biosynthetic process" evidence=IGI;TAS

GO:0080167 "response to karrikin" evidence=IEP

TAIR|locus:2124311 CAD5 "cinnamyl alcohol dehydrogenase 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 1195 (425.7 bits), Expect = 1.7e-121, P = 1.7e-121
 Identities = 228/356 (64%), Positives = 260/356 (73%)

Query:     1 MGSLDTERATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGM 60
             MG ++ ER T GWAA+DPSGILSPYTYTLR TG EDV I+++ CGICHTD+HQ KNDLGM
Sbjct:     1 MGIMEAERKTTGWAARDPSGILSPYTYTLRETGPEDVNIRIICCGICHTDLHQTKNDLGM 60

Query:    61 SNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNCRPCEADVEQYCNKKIWS 120
             SNYPM                 S F             CC  C PCE D+EQYC KKIWS
Sbjct:    61 SNYPMVPGHEVVGEVVEVGSDVSKFTVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWS 120

Query:   121 YNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQS 180
             YNDVY +G+PTQGGFA++ VV QKFVVKIP+GMA+EQAAPLLCAGVTV+SPLSHFGLKQ 
Sbjct:   121 YNDVYINGQPTQGGFAKATVVHQKFVVKIPEGMAVEQAAPLLCAGVTVYSPLSHFGLKQP 180

Query:   181 XXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQE 240
                                AKAMGHHVTVISSS+KKR EA++ LGAD Y++ SD  +M E
Sbjct:   181 GLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYVIGSDQAKMSE 240

Query:   241 AADSLDYIIDTVPANHPLEPYXXXXXXXXXXXXTGVINTPMQFLTPMVMLGRKAITGSFI 300
              ADSLDY+IDTVP +H LEPY             GVIN P+QFLTP++MLGRK ITGSFI
Sbjct:   241 LADSLDYVIDTVPVHHALEPYLSLLKLDGKLILMGVINNPLQFLTPLLMLGRKVITGSFI 300

Query:   301 GSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGSKLD 356
             GSMKET+EMLEFC+EKG++S+IEV+KMDYVN AFERLEKNDVRYRFVVDV GS LD
Sbjct:   301 GSMKETEEMLEFCKEKGLSSIIEVVKMDYVNTAFERLEKNDVRYRFVVDVEGSNLD 356

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016747 "transferase activity, transferring acyl groups other than amino-acyl groups" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0045551 "cinnamyl-alcohol dehydrogenase activity" evidence=IDA;IMP

GO:0009809 "lignin biosynthetic process" evidence=IGI;IMP;TAS

GO:0005829 "cytosol" evidence=IDA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0006865 "amino acid transport" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009805 "coumarin biosynthetic process" evidence=RCA

GO:0009963 "positive regulation of flavonoid biosynthetic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0015824 "proline transport" evidence=RCA

UNIPROTKB|O24562 CAD "Probable cinnamyl alcohol dehydrogenase" [Zea mays (taxid:4577)]

 Score = 1165 (415.2 bits), Expect = 2.6e-118, P = 2.6e-118
 Identities = 226/356 (63%), Positives = 255/356 (71%)

Query:     1 MGSLDTERATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGM 60
             MGSL +ER  +GWAA+D +G LSPY+YTLRNTG EDV +KVLYCGICHTDIHQ KN LG 
Sbjct:     1 MGSLASERKVVGWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHLGA 60

Query:    61 SNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNCRPCEADVEQYCNKKIWS 120
             S YPM                 + +             CCR C PC+A+VEQYCNKKIWS
Sbjct:    61 SKYPMVPGHEVVGEVVEVGPEVAKYGVGDVVGVGVIVGCCRECSPCKANVEQYCNKKIWS 120

Query:   121 YNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQS 180
             YNDVYTDG+PTQGGFA +MVVDQKFVVKIP G+A EQAAPLLCAGVTV+SPL HFGL   
Sbjct:   121 YNDVYTDGRPTQGGFASTMVVDQKFVVKIPAGLAPEQAAPLLCAGVTVYSPLKHFGLTNP 180

Query:   181 XXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQE 240
                                AKAMGHHVTVISSS KKR EAM+HLGAD YLVSSDA  M  
Sbjct:   181 GLRGGILGLGGVGHMGVKVAKAMGHHVTVISSSSKKRAEAMDHLGADAYLVSSDAAAMAA 240

Query:   241 AADSLDYIIDTVPANHPLEPYXXXXXXXXXXXXTGVINTPMQFLTPMVMLGRKAITGSFI 300
             AADSLDYIIDTVP +HPLEPY             GVI  P+ F++PMVMLGRKAITGSFI
Sbjct:   241 AADSLDYIIDTVPVHHPLEPYLALLKLDGKLVLLGVIGEPLSFVSPMVMLGRKAITGSFI 300

Query:   301 GSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGSKLD 356
             GS+ ET E+L+FC +KG+TS IEV+KM YVN+A ERLE+NDVRYRFVVDVAGS ++
Sbjct:   301 GSIDETAEVLQFCVDKGLTSQIEVVKMGYVNEALERLERNDVRYRFVVDVAGSNVE 356

GO:0009809 "lignin biosynthetic process" evidence=IMP

GO:0045551 "cinnamyl-alcohol dehydrogenase activity" evidence=IMP

UNIPROTKB|Q6ZHS4 CAD2 "Cinnamyl alcohol dehydrogenase 2" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 1147 (408.8 bits), Expect = 2.1e-116, P = 2.1e-116
 Identities = 222/356 (62%), Positives = 251/356 (70%)

Query:     1 MGSLDTERATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGM 60
             MGSL  E+   GWAA+D SG L+PY YTLR TG EDV +KVLYCGICHTDIHQ KN LG 
Sbjct:     1 MGSLAAEKTVTGWAARDASGHLTPYNYTLRKTGPEDVVVKVLYCGICHTDIHQAKNHLGA 60

Query:    61 SNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNCRPCEADVEQYCNKKIWS 120
             S YPM                 + +             CCR C PC+A+VEQYCNK+IWS
Sbjct:    61 SKYPMVPGHEVVGEVVEVGPEVTKYSAGDVVGVGVIVGCCRECHPCKANVEQYCNKRIWS 120

Query:   121 YNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQS 180
             YNDVYTDG+PTQGGFA +MVVDQKFVVKIP G+A EQAAPLLCAG+TV+SPL HFGL   
Sbjct:   121 YNDVYTDGRPTQGGFASAMVVDQKFVVKIPAGLAPEQAAPLLCAGLTVYSPLKHFGLMSP 180

Query:   181 XXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQE 240
                                AK+MGHHVTVISSS +KR EAM+ LGAD YLVSSDA  M  
Sbjct:   181 GLRGGVLGLGGVGHMGVKVAKSMGHHVTVISSSARKRGEAMDDLGADAYLVSSDAAAMAA 240

Query:   241 AADSLDYIIDTVPANHPLEPYXXXXXXXXXXXXTGVINTPMQFLTPMVMLGRKAITGSFI 300
             A DSLDYIIDTVP +HPLEPY             GVIN P+ F++PMVMLGRKAITGSFI
Sbjct:   241 AGDSLDYIIDTVPVHHPLEPYLALLKLDGKLILMGVINQPLSFISPMVMLGRKAITGSFI 300

Query:   301 GSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGSKLD 356
             GSM ET+E+L FC +KG+TS IEV+KMDYVN+A ERLE+NDVRYRFVVDVAGS +D
Sbjct:   301 GSMAETEEVLNFCVDKGLTSQIEVVKMDYVNQALERLERNDVRYRFVVDVAGSNID 356

GO:0009809 "lignin biosynthetic process" evidence=IDA

GO:0045551 "cinnamyl-alcohol dehydrogenase activity" evidence=IDA

TAIR|locus:2052494 CAD3 "cinnamyl alcohol dehydrogenase homolog 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 745 (267.3 bits), Expect = 8.4e-74, P = 8.4e-74
 Identities = 148/354 (41%), Positives = 209/354 (59%)

Query:     4 LDTERATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNY 63
             +D  RA  GWAA D SG+LSP+ ++ R  G  DV +K+L+CG+CH+D+H IKN  G S Y
Sbjct:     2 VDQNRA-FGWAANDESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGFSRY 60

Query:    64 PMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNCRPCEADVEQYCNKKIWSYND 123
             P+                 + F              C++C  C  D+E YC K +++YN 
Sbjct:    61 PIIPGHEIVGIATKVGKNVTKFKEGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNS 120

Query:   124 VYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGL-KQSXX 182
               +DG   QGG+++ +VVD +FV+ IPDG+  +  APLLCAG+TV+SP+ ++G+ K+S  
Sbjct:   121 RSSDGTRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKYYGMTKESGK 180

Query:   183 XXXXXXXXXXXXXXXXXAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAA 242
                               KA G  VTVIS S +K  EA++ LGAD +LV++D+ +M+EA 
Sbjct:   181 RLGVNGLGGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGADSFLVTTDSQKMKEAV 240

Query:   243 DSLDYIIDTVPANHPLEPYXXXXXXXXXXXXTGVINTPMQF-LTPMVMLGRKAITGSFIG 301
              ++D+IIDTV A H L P              G++  P+   + P+V LGRK + GS IG
Sbjct:   241 GTMDFIIDTVSAEHALLPLFSLLKVSGKLVALGLLEKPLDLPIFPLV-LGRKMVGGSQIG 299

Query:   302 SMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGSKL 355
              MKET+EMLEFC +  + S IE+IKM  +N A +RL K+DVRYRFV+DVA S L
Sbjct:   300 GMKETQEMLEFCAKHKIVSDIELIKMSDINSAMDRLVKSDVRYRFVIDVANSLL 353

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009809 "lignin biosynthetic process" evidence=IC

GO:0045551 "cinnamyl-alcohol dehydrogenase activity" evidence=IDA

TAIR|locus:2136278 CAD9 "cinnamyl alcohol dehydrogenase 9" [Arabidopsis thaliana (taxid:3702)]

 Score = 745 (267.3 bits), Expect = 8.4e-74, P = 8.4e-74
 Identities = 146/358 (40%), Positives = 212/358 (59%)

Query:     3 SLDTERAT--IGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGM 60
             S +TE      GW A+D SG+LSP+ ++ R+ G  DV +K+L+CG+CHTD+H IKND G 
Sbjct:     4 SPETEHPNKVFGWGARDKSGVLSPFHFSRRDNGENDVTVKILFCGVCHTDLHTIKNDWGY 63

Query:    61 SNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNCRPCEADVEQYCNKKIWS 120
             S YP+                 + F              C++C  C+ D+E YC +  ++
Sbjct:    64 SYYPVVPGHEIVGIATKVGKNVTKFKEGDRVGVGVISGSCQSCESCDQDLENYCPQMSFT 123

Query:   121 YNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQS 180
             YN + +DG    GG++E++VVDQ+FV++ P+ +  +  APLLCAG+TV+SP+ ++G+ ++
Sbjct:   124 YNAIGSDGTKNYGGYSENIVVDQRFVLRFPENLPSDSGAPLLCAGITVYSPMKYYGMTEA 183

Query:   181 XXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQE 240
                                 KA G  VTVISSS  K  EA+ HLGAD +LV++D  +M+ 
Sbjct:   184 GKHLGVAGLGGLGHVAVKIGKAFGLKVTVISSSSTKAEEAINHLGADSFLVTTDPQKMKA 243

Query:   241 AADSLDYIIDTVPANHPLEPYXXXXXXXXXXXXTGVINTPMQF-LTPMVMLGRKAITGSF 299
             A  ++DYIIDT+ A H L P              G+   P++  + P+V LGRK + GS 
Sbjct:   244 AIGTMDYIIDTISAVHALYPLLGLLKVNGKLIALGLPEKPLELPMFPLV-LGRKMVGGSD 302

Query:   300 IGSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGSKLDP 357
             +G MKET+EML+FC +  +T+ IE+IKMD +N A ERL K+DVRYRFV+DVA S L P
Sbjct:   303 VGGMKETQEMLDFCAKHNITADIELIKMDEINTAMERLAKSDVRYRFVIDVANS-LSP 359

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016747 "transferase activity, transferring acyl groups other than amino-acyl groups" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009809 "lignin biosynthetic process" evidence=IMP

GO:0045551 "cinnamyl-alcohol dehydrogenase activity" evidence=IMP

GO:0048046 "apoplast" evidence=IDA

TAIR|locus:2052516 CAD2 "cinnamyl alcohol dehydrogenase homolog 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 727 (261.0 bits), Expect = 6.7e-72, P = 6.7e-72
 Identities = 145/354 (40%), Positives = 206/354 (58%)

Query:     4 LDTERATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNY 63
             +D  +A  GWAA D SG+LSP+ ++ R  G  DV +K+L+CG+CH+D+H IKN  G S Y
Sbjct:     2 VDQNKA-FGWAANDESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGFSRY 60

Query:    64 PMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNCRPCEADVEQYCNKKIWSYND 123
             P+                 + F              C++C  C  D+E YC K +++YN 
Sbjct:    61 PIIPGHEIVGIATKVGKNVTKFKEGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNS 120

Query:   124 VYTDGKP-TQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGL-KQSX 181
               +DG    QGG+++ +VVD +FV+ IPDG+  +  APLLCAG+TV+SP+ ++G+ K+S 
Sbjct:   121 RSSDGTSRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKYYGMTKESG 180

Query:   182 XXXXXXXXXXXXXXXXXXAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEA 241
                                KA G  VTVIS S +K  EA++ LGAD +LV++D+ +M+EA
Sbjct:   181 KRLGVNGLGGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGADSFLVTTDSQKMKEA 240

Query:   242 ADSLDYIIDTVPANHPLEPYXXXXXXXXXXXXTGVINTPMQFLTPMVMLGRKAITGSFIG 301
               ++D+IIDTV A H L P              G+   P+      ++LGRK + GS IG
Sbjct:   241 VGTMDFIIDTVSAEHALLPLFSLLKVNGKLVALGLPEKPLDLPIFSLVLGRKMVGGSQIG 300

Query:   302 SMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGSKL 355
              MKET+EMLEFC +  + S IE+IKM  +N A +RL K+DVRYRFV+DVA S L
Sbjct:   301 GMKETQEMLEFCAKHKIVSDIELIKMSDINSAMDRLAKSDVRYRFVIDVANSLL 354

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009809 "lignin biosynthetic process" evidence=IC

GO:0045551 "cinnamyl-alcohol dehydrogenase activity" evidence=IDA

TAIR|locus:2005528 ELI3-2 "elicitor-activated gene 3-2" [Arabidopsis thaliana (taxid:3702)]

 Score = 705 (253.2 bits), Expect = 1.4e-69, P = 1.4e-69
 Identities = 146/357 (40%), Positives = 203/357 (56%)

Query:     1 MGSLDTERATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGM 60
             MG +  ++   G AAKD SG+LSP+++T R TG +DV  KVL+CGICH+D+H +KN+ GM
Sbjct:     1 MGKV-LQKEAFGLAAKDNSGVLSPFSFTRRETGEKDVRFKVLFCGICHSDLHMVKNEWGM 59

Query:    61 SNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNCRPCEADVEQYCNKKIWS 120
             S YP+                 + F              C +C  C   +E YC K I +
Sbjct:    60 STYPLVPGHEIVGVVTEVGAKVTKFKTGEKVGVGCLVSSCGSCDSCTEGMENYCPKSIQT 119

Query:   121 YNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQS 180
             Y   Y D   T GG+++ MV ++ FV++IPD + L+ AAPLLCAG+TV+SP+ + GL + 
Sbjct:   120 YGFPYYDNTITYGGYSDHMVCEEGFVIRIPDNLPLDAAAPLLCAGITVYSPMKYHGLDKP 179

Query:   181 XXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQE 240
                                AKAMG  VTVIS+S+KKR EA+  LGAD +LVS D  ++++
Sbjct:   180 GMHIGVVGLGGLGHVGVKFAKAMGTKVTVISTSEKKRDEAINRLGADAFLVSRDPKQIKD 239

Query:   241 AADSLDYIIDTVPANHPLEPYXXXXXXXXXXXXTGVINTPMQFLTPMVMLGRKAITGSFI 300
             A  ++D IIDTV A H L P              G    P++     ++  RK + GS I
Sbjct:   240 AMGTMDGIIDTVSATHSLLPLLGLLKHKGKLVMVGAPEKPLELPVMPLIFERKMVMGSMI 299

Query:   301 GSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGSKLDP 357
             G +KET+EM++   +  +T+ IE+I  DYVN A ERLEK DVRYRFV+DVA + L P
Sbjct:   300 GGIKETQEMIDMAGKHNITADIELISADYVNTAMERLEKADVRYRFVIDVANT-LKP 355

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0046029 "mannitol dehydrogenase activity" evidence=IDA

GO:0047681 "aryl-alcohol dehydrogenase (NADP+) activity" evidence=IDA

GO:0009617 "response to bacterium" evidence=IEP

GO:0009626 "plant-type hypersensitive response" evidence=IGI

GO:0045551 "cinnamyl-alcohol dehydrogenase activity" evidence=IDA

GO:0009809 "lignin biosynthetic process" evidence=IEP

GO:0006865 "amino acid transport" evidence=RCA

GO:0009407 "toxin catabolic process" evidence=RCA

GO:0010583 "response to cyclopentenone" evidence=RCA

TAIR|locus:2120968 CAD6 "cinnamyl alcohol dehydrogenase 6" [Arabidopsis thaliana (taxid:3702)]

 Score = 701 (251.8 bits), Expect = 3.8e-69, P = 3.8e-69
 Identities = 141/352 (40%), Positives = 197/352 (55%)

Query:     2 GSLDTERATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMS 61
             G  +      GWAA+D SG LSP+ ++ R TG E+V +KVLYCGICH+D+H +KN+   S
Sbjct:     6 GEKEQSVEAFGWAARDSSGHLSPFVFSRRKTGEEEVRVKVLYCGICHSDLHCLKNEWHSS 65

Query:    62 NYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNCRPCEADVEQYCNKKIWSY 121
              YP+                 S F              CR C  C  D E YC K I +Y
Sbjct:    66 IYPLVPGHEIIGEVSEIGNKVSKFNLGDKVGVGCIVDSCRTCESCREDQENYCTKAIATY 125

Query:   122 NDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSX 181
             N V+ DG    GG+++ +VVD+++ VKIP  + L  AAPLLCAG++++SP+ +FGL    
Sbjct:   126 NGVHHDGTINYGGYSDHIVVDERYAVKIPHTLPLVSAAPLLCAGISMYSPMKYFGLTGPD 185

Query:   182 XXXXXXXXXXXXXXXXXXAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEA 241
                               AKA G  VTV+SS+  K  +A++ LGAD +LVS+D  +M+ A
Sbjct:   186 KHVGIVGLGGLGHIGVRFAKAFGTKVTVVSSTTGKSKDALDTLGADGFLVSTDEDQMKAA 245

Query:   242 ADSLDYIIDTVPANHPLEPYXXXXXXXXXXXXTGVINTPMQFLTPMVMLGRKAITGSFIG 301
               ++D IIDTV A+H + P              G    P       ++LGRK+I GS IG
Sbjct:   246 MGTMDGIIDTVSASHSISPLIGLLKSNGKLVLLGATEKPFDISAFSLILGRKSIAGSGIG 305

Query:   302 SMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGS 353
              M+ET+EM++F  E G+ + IE+I MDYVN A +RL K DVRYRFV+D++ +
Sbjct:   306 GMQETQEMIDFAAEHGIKAEIEIISMDYVNTAMDRLAKGDVRYRFVIDISNT 357

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009809 "lignin biosynthetic process" evidence=IEP

TAIR|locus:2005527 ELI3-1 "elicitor-activated gene 3-1" [Arabidopsis thaliana (taxid:3702)]

 Score = 673 (242.0 bits), Expect = 3.6e-66, P = 3.6e-66
 Identities = 141/353 (39%), Positives = 196/353 (55%)

Query:     1 MGSLDTERATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGM 60
             MG +  E+   G AAKD SGILSP++++ R TG +DV  KVL+CGICHTD+   KN+ G+
Sbjct:     1 MGKV-LEKEAFGLAAKDESGILSPFSFSRRATGEKDVRFKVLFCGICHTDLSMAKNEWGL 59

Query:    61 SNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNCRPCEADVEQYCNKKIWS 120
             + YP+                   F              CR+C  C    E YC K I +
Sbjct:    60 TTYPLVPGHEIVGVVTEVGAKVKKFNAGDKVGVGYMAGSCRSCDSCNDGDENYCPKMILT 119

Query:   121 YNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQS 180
                   D   T GG+++ MV  + F+++IPD + L+ AAPLLCAGVTV+SP+ + GL + 
Sbjct:   120 SGAKNFDDTMTHGGYSDHMVCAEDFIIRIPDNLPLDGAAPLLCAGVTVYSPMKYHGLDKP 179

Query:   181 XXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQE 240
                                AKAMG  VTVIS+S++KR EA+  LGAD +LVS D  +M++
Sbjct:   180 GMHIGVVGLGGLGHVAVKFAKAMGTKVTVISTSERKRDEAVTRLGADAFLVSRDPKQMKD 239

Query:   241 AADSLDYIIDTVPANHPLEPYXXXXXXXXXXXXTGVINTPMQFLTPMVMLGRKAITGSFI 300
             A  ++D IIDTV A HPL P              G    P++     ++ GRK + GS +
Sbjct:   240 AMGTMDGIIDTVSATHPLLPLLGLLKNKGKLVMVGAPAEPLELPVFPLIFGRKMVVGSMV 299

Query:   301 GSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGS 353
             G +KET+EM++   +  +T+ IE+I  DYVN A ERL K DV+YRFV+DVA +
Sbjct:   300 GGIKETQEMVDLAGKHNITADIELISADYVNTAMERLAKADVKYRFVIDVANT 352

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016747 "transferase activity, transferring acyl groups other than amino-acyl groups" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009617 "response to bacterium" evidence=IEP

GO:0009626 "plant-type hypersensitive response" evidence=IGI

GO:0045551 "cinnamyl-alcohol dehydrogenase activity" evidence=IDA

GO:0009809 "lignin biosynthetic process" evidence=IEP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P0A4X1	ADHC_MYCBO	1, ., 1, ., 1, ., 2	0.4617	0.9439	0.9739	yes	no
P0A4X0	ADHC_MYCTU	1, ., 1, ., 1, ., 2	0.4617	0.9439	0.9739	yes	no
P42754	MTDH_PETCR	1, ., 1, ., 1, ., 2, 5, 5	0.5345	0.9327	0.9881	N/A	no
Q08350	CADH7_PICAB	1, ., 1, ., 1, ., 1, 9, 5	0.6853	0.9971	0.9971	N/A	no
P42495	CADH1_ARACO	1, ., 1, ., 1, ., 1, 9, 5	0.8515	0.9971	0.9888	N/A	no
P30360	CADH2_TOBAC	1, ., 1, ., 1, ., 1, 9, 5	0.8117	0.9971	0.9971	N/A	no
P50746	CADH_EUCBO	1, ., 1, ., 1, ., 1, 9, 5	0.8117	0.9943	1.0	N/A	no
Q6ZHS4	CADH2_ORYSJ	1, ., 1, ., 1, ., 1, 9, 5	0.7668	0.9971	0.9807	yes	no
O82035	CADH2_PICAB	1, ., 1, ., 1, ., 1, 9, 5	0.6825	0.9971	0.9971	N/A	no
O49482	CADH5_ARATH	1, ., 1, ., 1, ., 1, 9, 5	0.7949	0.9971	0.9971	no	no
O82056	CADH_SACOF	1, ., 1, ., 1, ., 1, 9, 5	0.7640	0.9971	0.9753	N/A	no
P48523	CADH4_ARATH	1, ., 1, ., 1, ., 1, 9, 5	0.7837	0.9943	0.9726	yes	no
P93257	MTDH_MESCR	1, ., 1, ., 1, ., 2, 5, 5	0.5549	0.9691	0.9584	N/A	no
P31657	CADH_POPDE	1, ., 1, ., 1, ., 1, 9, 5	0.8394	0.9943	0.9943	N/A	no
P31656	CADH_MEDSA	1, ., 1, ., 1, ., 1, 9, 5	0.8039	0.9971	0.9944	N/A	no
P31655	CADH2_EUCGU	1, ., 1, ., 1, ., 1, 9, 5	0.8117	0.9971	1.0	N/A	no
P0CH36	ADHC1_MYCS2	1, ., 1, ., 1, ., 2	0.4721	0.9439	0.9656	yes	no
P0CH37	ADHC2_MYCS2	1, ., 1, ., 1, ., 2	0.4721	0.9439	0.9656	yes	no
P30359	CADH1_TOBAC	1, ., 1, ., 1, ., 1, 9, 5	0.8286	0.9971	0.9971	N/A	no
O64969	CADH_EUCGL	1, ., 1, ., 1, ., 1, 9, 5	0.8146	0.9971	1.0	N/A	no
Q2KNL5	CADH1_OCIBA	1, ., 1, ., 1, ., 1, 9, 5	0.8338	0.9943	0.9943	N/A	no
Q2KNL6	GEDH1_OCIBA	1, ., 1, ., 1, ., 1, 8, 3	0.5218	0.9607	0.9527	N/A	no
Q43137	MTDH1_STYHU	1, ., 1, ., 1, ., 2, 5, 5	0.5131	0.9579	0.9661	N/A	no
O24562	CADH_MAIZE	1, ., 1, ., 1, ., 1, 9, 5	0.7830	0.9943	0.9673	N/A	no
P41637	CADH_PINTA	1, ., 1, ., 1, ., 1, 9, 5	0.6741	0.9971	0.9971	N/A	no
Q9ZRF1	MTDH_FRAAN	1, ., 1, ., 1, ., 2, 5, 5	0.5438	0.9579	0.9526	N/A	no
O82515	MTDH_MEDSA	1, ., 1, ., 1, ., 2, 5, 5	0.5102	0.9579	0.9526	N/A	no
Q6V4H0	10HGO_CATRO	1, ., 1, ., 1, ., 3, 2, 4	0.5436	0.9635	0.9555	N/A	no
Q42726	CADH1_EUCGU	1, ., 1, ., 1, ., 1, 9, 5	0.8005	0.9915	1.0	N/A	no
Q40976	CADH_PINRA	1, ., 1, ., 1, ., 1, 9, 5	0.6853	0.9971	0.9971	N/A	no
O22380	CADH_LOLPR	1, ., 1, ., 1, ., 1, 9, 5	0.7759	0.9971	0.9861	N/A	no
Q38707	MTDH_APIGR	1, ., 1, ., 1, ., 2, 5, 5	0.5043	0.9607	0.9397	N/A	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.1.1	0.998
4th Layer	1.1.1.195	0.994

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	GSVIVG00036664001	SubName- Full=Chromosome chr3 scaffold_8, whole genome shotgun sequence; (357 aa)
		(Vitis vinifera)
Predicted Functional Partners:
	GSVIVG00037866001	SubName- Full=Chromosome chr14 scaffold_9, whole genome shotgun sequence; (326 aa)						•			0.899
	GSVIVG00036874001	SubName- Full=Chromosome chr4 scaffold_83, whole genome shotgun sequence; (332 aa)						•			0.899
	GSVIVG00036840001	SubName- Full=Chromosome chr4 scaffold_83, whole genome shotgun sequence; (514 aa)						•			0.899
	GSVIVG00036533001	SubName- Full=Chromosome chr3 scaffold_8, whole genome shotgun sequence; (329 aa)						•			0.899
	GSVIVG00035150001	SubName- Full=Chromosome chr1 scaffold_75, whole genome shotgun sequence; (302 aa)						•			0.899
	GSVIVG00034598001	SubName- Full=Chromosome chr5 scaffold_72, whole genome shotgun sequence; (340 aa)						•			0.899
	GSVIVG00033763001	SubName- Full=Chromosome undetermined scaffold_69, whole genome shotgun sequence; (338 aa)						•			0.899
	GSVIVG00033166001	SubName- Full=Chromosome chr5 scaffold_64, whole genome shotgun sequence; (310 aa)						•			0.899
	GSVIVG00033150001	SubName- Full=Chromosome chr5 scaffold_64, whole genome shotgun sequence; (325 aa)						•			0.899
	GSVIVG00031723001	SubName- Full=Chromosome chr18 scaffold_59, whole genome shotgun sequence; (360 aa)						•			0.899

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	357
PLN02514	357	PLN02514, PLN02514, cinnamyl-alcohol dehydrogenase	0.0
cd05283	337	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CA	0.0
PLN02586	360	PLN02586, PLN02586, probable cinnamyl alcohol dehy	1e-156
PLN02178	375	PLN02178, PLN02178, cinnamyl-alcohol dehydrogenase	1e-134
COG1064	339	COG1064, AdhP, Zn-dependent alcohol dehydrogenases	1e-120
cd08245	330	cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD	1e-119
cd08297	341	cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CA	1e-82
cd08296	333	cd08296, CAD_like, Cinnamyl alcohol dehydrogenases	2e-81
cd08298	329	cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CA	1e-63
cd05284	340	cd05284, arabinose_DH_like, D-arabinose dehydrogen	6e-59
cd08240	350	cd08240, 6_hydroxyhexanoate_dh_like, 6-hydroxyhexa	3e-58
cd05188	271	cd05188, MDR, Medium chain reductase/dehydrogenase	6e-58
cd08254	338	cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-e	2e-52
cd08259	332	cd08259, Zn_ADH5, Alcohol dehydrogenases of the MD	3e-47
PRK09422	338	PRK09422, PRK09422, ethanol-active dehydrogenase/a	3e-41
cd08234	334	cd08234, threonine_DH_like, L-threonine dehydrogen	3e-39
COG1063	350	COG1063, Tdh, Threonine dehydrogenase and related	2e-38
cd08235	343	cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenas	7e-37
COG1062	366	COG1062, AdhC, Zn-dependent alcohol dehydrogenases	2e-35
PRK13771	334	PRK13771, PRK13771, putative alcohol dehydrogenase	2e-35
cd08279	363	cd08279, Zn_ADH_class_III, Class III alcohol dehyd	5e-35
COG0604	326	COG0604, Qor, NADPH:quinone reductase and related	3e-34
cd08236	343	cd08236, sugar_DH, NAD(P)-dependent sugar dehydrog	4e-34
cd08263	367	cd08263, Zn_ADH10, Alcohol dehydrogenases of the M	7e-34
pfam08240	108	pfam08240, ADH_N, Alcohol dehydrogenase GroES-like	9e-33
cd08267	319	cd08267, MDR1, Medium chain dehydrogenases/reducta	1e-32
cd05289	309	cd05289, MDR_like_2, alcohol dehydrogenase and qui	2e-32
cd08233	351	cd08233, butanediol_DH_like, (2R,3R)-2,3-butanedio	2e-32
cd08258	306	cd08258, Zn_ADH4, Alcohol dehydrogenases of the MD	3e-32
TIGR02822	329	TIGR02822, adh_fam_2, zinc-binding alcohol dehydro	1e-31
cd08260	345	cd08260, Zn_ADH6, Alcohol dehydrogenases of the MD	1e-30
cd08266	342	cd08266, Zn_ADH_like1, Alcohol dehydrogenases of t	1e-30
cd08239	339	cd08239, THR_DH_like, L-threonine dehydrogenase (T	2e-30
cd05279	365	cd05279, Zn_ADH1, Liver alcohol dehydrogenase and	4e-29
cd08231	361	cd08231, MDR_TM0436_like, Hypothetical enzyme TM04	6e-29
cd05278	347	cd05278, FDH_like, Formaldehyde dehydrogenases	2e-28
cd05285	343	cd05285, sorbitol_DH, Sorbitol dehydrogenase	2e-27
cd08264	325	cd08264, Zn_ADH_like2, Alcohol dehydrogenases of t	4e-27
cd08241	323	cd08241, QOR1, Quinone oxidoreductase (QOR)	4e-27
cd08249	339	cd08249, enoyl_reductase_like, enoyl_reductase_lik	6e-27
PRK05396	341	PRK05396, tdh, L-threonine 3-dehydrogenase; Valida	7e-27
cd05276	323	cd05276, p53_inducible_oxidoreductase, PIG3 p53-in	7e-26
cd08277	365	cd08277, liver_alcohol_DH_like, Liver alcohol dehy	7e-26
cd08281	371	cd08281, liver_ADH_like1, Zinc-dependent alcohol d	2e-25
cd08284	344	cd08284, FDH_like_2, Glutathione-dependent formald	2e-25
TIGR03989	369	TIGR03989, Rxyl_3153, oxidoreductase, Rxyl_3153 fa	8e-25
cd08261	337	cd08261, Zn_ADH7, Alcohol dehydrogenases of the MD	8e-25
cd08276	336	cd08276, MDR7, Medium chain dehydrogenases/reducta	1e-24
cd08278	365	cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydro	3e-23
cd08271	325	cd08271, MDR5, Medium chain dehydrogenases/reducta	4e-22
TIGR00692	340	TIGR00692, tdh, L-threonine 3-dehydrogenase	1e-21
TIGR02824	325	TIGR02824, quinone_pig3, putative NAD(P)H quinone	2e-21
pfam00107	131	pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase	2e-21
cd05281	341	cd05281, TDH, Threonine dehydrogenase	7e-21
cd08232	339	cd08232, idonate-5-DH, L-idonate 5-dehydrogenase	1e-20
cd05195	293	cd05195, enoyl_red, enoyl reductase of polyketide	2e-20
PLN02740	381	PLN02740, PLN02740, Alcohol dehydrogenase-like	3e-20
cd08285	351	cd08285, NADP_ADH, NADP(H)-dependent alcohol dehyd	4e-20
cd08299	373	cd08299, alcohol_DH_class_I_II_IV, class I, II, IV	9e-20
PRK10309	347	PRK10309, PRK10309, galactitol-1-phosphate dehydro	2e-19
PLN02702	364	PLN02702, PLN02702, L-idonate 5-dehydrogenase	2e-19
cd08248	350	cd08248, RTN4I1, Human Reticulon 4 Interacting Pro	2e-19
smart00829	287	smart00829, PKS_ER, Enoylreductase	3e-19
cd05286	320	cd05286, QOR2, Quinone oxidoreductase (QOR)	5e-19
TIGR03451	358	TIGR03451, mycoS_dep_FDH, S-(hydroxymethyl)mycothi	8e-19
cd08286	345	cd08286, FDH_like_ADH2, formaldehyde dehydrogenase	1e-18
cd08262	341	cd08262, Zn_ADH8, Alcohol dehydrogenases of the MD	3e-18
TIGR02823	323	TIGR02823, oxido_YhdH, putative quinone oxidoreduc	9e-18
cd08268	328	cd08268, MDR2, Medium chain dehydrogenases/reducta	1e-17
cd08275	337	cd08275, MDR3, Medium chain dehydrogenases/reducta	2e-17
cd08230	355	cd08230, glucose_DH, Glucose dehydrogenase	3e-17
cd08253	325	cd08253, zeta_crystallin, Zeta-crystallin with NAD	8e-17
cd05280	325	cd05280, MDR_yhdh_yhfp, Yhdh and yhfp-like putativ	2e-16
cd08282	375	cd08282, PFDH_like, Pseudomonas putida aldehyde-di	3e-16
cd08272	326	cd08272, MDR6, Medium chain dehydrogenases/reducta	3e-16
cd08301	369	cd08301, alcohol_DH_plants, Plant alcohol dehydrog	6e-16
cd08256	350	cd08256, Zn_ADH2, Alcohol dehydrogenases of the MD	1e-15
cd08255	277	cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochloro	2e-15
cd08242	319	cd08242, MDR_like, Medium chain dehydrogenases/red	2e-15
cd08265	384	cd08265, Zn_ADH3, Alcohol dehydrogenases of the MD	4e-15
cd08273	331	cd08273, MDR8, Medium chain dehydrogenases/reducta	8e-15
cd08283	386	cd08283, FDH_like_1, Glutathione-dependent formald	1e-14
TIGR03366	280	TIGR03366, HpnZ_proposed, putative phosphonate cat	2e-14
cd08300	368	cd08300, alcohol_DH_class_III, class III alcohol d	4e-14
TIGR03201	349	TIGR03201, dearomat_had, 6-hydroxycyclohex-1-ene-1	9e-14
cd08269	312	cd08269, Zn_ADH9, Alcohol dehydrogenases of the MD	1e-13
PRK10083	339	PRK10083, PRK10083, putative oxidoreductase; Provi	2e-13
PTZ00354	334	PTZ00354, PTZ00354, alcohol dehydrogenase; Provisi	6e-13
cd08250	329	cd08250, Mgc45594_like, Mgc45594 gene product and	6e-13
TIGR02818	368	TIGR02818, adh_III_F_hyde, S-(hydroxymethyl)glutat	3e-12
cd05282	323	cd05282, ETR_like, 2-enoyl thioester reductase-lik	3e-12
cd08289	326	cd08289, MDR_yhfp_like, Yhfp putative quinone oxid	5e-12
cd08274	350	cd08274, MDR9, Medium chain dehydrogenases/reducta	5e-12
cd08252	336	cd08252, AL_MDR, Arginate lyase and other MDR fami	7e-12
cd08251	303	cd08251, polyketide_synthase, polyketide synthase	2e-11
cd08288	324	cd08288, MDR_yhdh, Yhdh putative quinone oxidoredu	3e-11
PRK09880	343	PRK09880, PRK09880, L-idonate 5-dehydrogenase; Pro	2e-10
cd08287	345	cd08287, FDH_like_ADH3, formaldehyde dehydrogenase	2e-10
cd08243	320	cd08243, quinone_oxidoreductase_like_1, Quinone ox	1e-09
cd08270	305	cd08270, MDR4, Medium chain dehydrogenases/reducta	1e-09
TIGR02819	393	TIGR02819, fdhA_non_GSH, formaldehyde dehydrogenas	1e-09
PLN02827	378	PLN02827, PLN02827, Alcohol dehydrogenase-like	2e-09
cd08290	341	cd08290, ETR, 2-enoyl thioester reductase (ETR)	6e-09
cd08246	393	cd08246, crotonyl_coA_red, crotonyl-CoA reductase	1e-08
TIGR01751	398	TIGR01751, crot-CoA-red, crotonyl-CoA reductase	2e-08
TIGR02817	336	TIGR02817, adh_fam_1, zinc-binding alcohol dehydro	3e-08
cd08247	352	cd08247, AST1_like, AST1 is a cytoplasmic protein	4e-08
cd08244	324	cd08244, MDR_enoyl_red, Possible enoyl reductase	5e-08
COG2130	340	COG2130, COG2130, Putative NADP-dependent oxidored	1e-07
TIGR01202	308	TIGR01202, bchC, 2-desacetyl-2-hydroxyethyl bacter	1e-07
cd08292	324	cd08292, ETR_like_2, 2-enoyl thioester reductase (	9e-06
PRK10754	327	PRK10754, PRK10754, quinone oxidoreductase, NADPH-	4e-04

>gnl|CDD|166155 PLN02514, PLN02514, cinnamyl-alcohol dehydrogenase

 Score =  736 bits (1901), Expect = 0.0
 Identities = 307/357 (85%), Positives = 329/357 (92%)

Query: 1   MGSLDTERATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGM 60
           MGSL+ E+ T GWAA+DPSG LSPYTYTLR TG EDV IKV+YCGICHTD+HQIKNDLGM
Sbjct: 1   MGSLEAEKKTTGWAARDPSGHLSPYTYTLRKTGPEDVVIKVIYCGICHTDLHQIKNDLGM 60

Query: 61  SNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWS 120
           SNYPMVPGHEVVGEV EVGS+VS F VGD VGVGV+VGCC  C PC++D+EQYCNK+IWS
Sbjct: 61  SNYPMVPGHEVVGEVVEVGSDVSKFTVGDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWS 120

Query: 121 YNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQS 180
           YNDVYTDGKPTQGGFA +MVVDQKFVVKIP+GMA EQAAPLLCAGVTV+SPLSHFGLKQS
Sbjct: 121 YNDVYTDGKPTQGGFASAMVVDQKFVVKIPEGMAPEQAAPLLCAGVTVYSPLSHFGLKQS 180

Query: 181 GLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQE 240
           GLRGGILGLGGVGHMGV IAKAMGHHVTVISSSDKKR EA+EHLGAD YLVSSDA  MQE
Sbjct: 181 GLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKREEALEHLGADDYLVSSDAAEMQE 240

Query: 241 AADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFI 300
           AADSLDYIIDTVP  HPLEPYLSLLKLDGKLIL GVINTP+QF+TPM+MLGRK ITGSFI
Sbjct: 241 AADSLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVINTPLQFVTPMLMLGRKVITGSFI 300

Query: 301 GSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGSKLDP 357
           GSMKET+EMLEFC+EKG+TSMIEV+KMDYVN AFERLEKNDVRYRFVVDVAGS LD 
Sbjct: 301 GSMKETEEMLEFCKEKGLTSMIEVVKMDYVNTAFERLEKNDVRYRFVVDVAGSNLDA 357

Length = 357

>gnl|CDD|176186 cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)

 Score =  526 bits (1357), Expect = 0.0
 Identities = 175/338 (51%), Positives = 238/338 (70%), Gaps = 2/338 (0%)

Query: 12  GWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEV 71
           G+AA+D SG L P+T+  R  G +DV IK+ YCG+CH+D+H ++N+ G + YP+VPGHE+
Sbjct: 2   GYAARDASGKLEPFTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWGPTKYPLVPGHEI 61

Query: 72  VGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPT 131
           VG V  VGS+V+ FKVGD+VGVG  V  C  C  C++  EQYC K + +YN  Y DG  T
Sbjct: 62  VGIVVAVGSKVTKFKVGDRVGVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKYPDGTIT 121

Query: 132 QGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGG 191
           QGG+A+ +VVD++FV KIP+G+    AAPLLCAG+TV+SPL   G+   G R G++G+GG
Sbjct: 122 QGGYADHIVVDERFVFKIPEGLDSAAAAPLLCAGITVYSPLKRNGVG-PGKRVGVVGIGG 180

Query: 192 VGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDT 251
           +GH+ V  AKA+G  VT  S S  K+ +A++ LGAD+++ + D   M++AA SLD IIDT
Sbjct: 181 LGHLAVKFAKALGAEVTAFSRSPSKKEDALK-LGADEFIATKDPEAMKKAAGSLDLIIDT 239

Query: 252 VPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLE 311
           V A+H L+PYLSLLK  G L+L G    P+      ++ GRK++ GS IG  KET+EML+
Sbjct: 240 VSASHDLDPYLSLLKPGGTLVLVGAPEEPLPVPPFPLIFGRKSVAGSLIGGRKETQEMLD 299

Query: 312 FCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVD 349
           F  E G+   +EVI MD +N+A ERLEK DVRYRFV+D
Sbjct: 300 FAAEHGIKPWVEVIPMDGINEALERLEKGDVRYRFVLD 337

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|166227 PLN02586, PLN02586, probable cinnamyl alcohol dehydrogenase

 Score =  442 bits (1138), Expect = e-156
 Identities = 183/343 (53%), Positives = 252/343 (73%), Gaps = 2/343 (0%)

Query: 12  GWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEV 71
           GWAA+DPSG+LSP+ ++ R  G EDV +K+LYCG+CH+D+H IKN+ G + YP+VPGHE+
Sbjct: 15  GWAARDPSGVLSPFHFSRRENGDEDVTVKILYCGVCHSDLHTIKNEWGFTRYPIVPGHEI 74

Query: 72  VGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPT 131
           VG V ++G  V  FK GD+VGVGV+VG C++C  C+ D+E YC K I++YN +  DG   
Sbjct: 75  VGIVTKLGKNVKKFKEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTKN 134

Query: 132 QGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGG 191
            GG+++ +VVDQ FV++ PD + L+  APLLCAG+TV+SP+ ++G+ + G   G+ GLGG
Sbjct: 135 YGGYSDMIVVDQHFVLRFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGG 194

Query: 192 VGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDT 251
           +GH+ V I KA G  VTVISSS  K  EA+  LGAD +LVS+D  +M+ A  ++DYIIDT
Sbjct: 195 LGHVAVKIGKAFGLKVTVISSSSNKEDEAINRLGADSFLVSTDPEKMKAAIGTMDYIIDT 254

Query: 252 VPANHPLEPYLSLLKLDGKLILTGVINTPMQF-LTPMVMLGRKAITGSFIGSMKETKEML 310
           V A H L P L LLK++GKLI  G+   P++  + P+V LGRK + GS IG +KET+EML
Sbjct: 255 VSAVHALGPLLGLLKVNGKLITLGLPEKPLELPIFPLV-LGRKLVGGSDIGGIKETQEML 313

Query: 311 EFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGS 353
           +FC +  +T+ IE+I+MD +N A ERL K+DVRYRFV+DVA S
Sbjct: 314 DFCAKHNITADIELIRMDEINTAMERLAKSDVRYRFVIDVANS 356

Length = 360

>gnl|CDD|177834 PLN02178, PLN02178, cinnamyl-alcohol dehydrogenase

 Score =  387 bits (994), Expect = e-134
 Identities = 179/345 (51%), Positives = 249/345 (72%), Gaps = 1/345 (0%)

Query: 12  GWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEV 71
           GWAA D SG+LSP+ ++ R  G  DV +K+L+CG+CH+D+H IKN  G S YP++PGHE+
Sbjct: 9   GWAANDESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGFSRYPIIPGHEI 68

Query: 72  VGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPT 131
           VG   +VG  V+ FK GD+VGVGV++G C++C  C  D+E YC K +++YN   +DG   
Sbjct: 69  VGIATKVGKNVTKFKEGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRN 128

Query: 132 QGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGL-KQSGLRGGILGLG 190
           QGG+++ +VVD +FV+ IPDG+  +  APLLCAG+TV+SP+ ++G+ K+SG R G+ GLG
Sbjct: 129 QGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKYYGMTKESGKRLGVNGLG 188

Query: 191 GVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIID 250
           G+GH+ V I KA G  VTVIS S +K  EA++ LGAD +LV++D+ +M+EA  ++D+IID
Sbjct: 189 GLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGADSFLVTTDSQKMKEAVGTMDFIID 248

Query: 251 TVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEML 310
           TV A H L P  SLLK+ GKL+  G+   P+      ++LGRK + GS IG MKET+EML
Sbjct: 249 TVSAEHALLPLFSLLKVSGKLVALGLPEKPLDLPIFPLVLGRKMVGGSQIGGMKETQEML 308

Query: 311 EFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGSKL 355
           EFC +  + S IE+IKM  +N A +RL K+DVRYRFV+DVA S L
Sbjct: 309 EFCAKHKIVSDIELIKMSDINSAMDRLAKSDVRYRFVIDVANSLL 353

Length = 375

>gnl|CDD|223992 COG1064, AdhP, Zn-dependent alcohol dehydrogenases [General function prediction only]

 Score =  349 bits (898), Expect = e-120
 Identities = 136/342 (39%), Positives = 189/342 (55%), Gaps = 15/342 (4%)

Query: 12  GWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEV 71
               K     L      +   G  +V IKV  CG+CHTD+H  K D  +   P++PGHE+
Sbjct: 6   AAVLKKFGQPLEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPVPKLPLIPGHEI 65

Query: 72  VGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYC-NKKIWSYNDVYTDGKP 130
           VG V EVG  V+  KVGD+VGVG LV  C  C  C +  E  C N+KI  Y         
Sbjct: 66  VGTVVEVGEGVTGLKVGDRVGVGWLVISCGECEYCRSGNENLCPNQKITGYT-------- 117

Query: 131 TQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLG 190
           T GG+AE +VV  ++VVKIP+G+ L +AAPLLCAG+T +  L    +K  G    ++G G
Sbjct: 118 TDGGYAEYVVVPARYVVKIPEGLDLAEAAPLLCAGITTYRALKKANVK-PGKWVAVVGAG 176

Query: 191 GVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIID 250
           G+GHM V  AKAMG  V  I+ S++K   A + LGAD  + SSD+  ++   +  D IID
Sbjct: 177 GLGHMAVQYAKAMGAEVIAITRSEEKLELAKK-LGADHVINSSDSDALEAVKEIADAIID 235

Query: 251 TVPANHPLEPYLSLLKLDGKLILTGV--INTPMQFLTPMVMLGRKAITGSFIGSMKETKE 308
           TV     LEP L  L+  G L+L G+            +++L   +I GS +G+  + +E
Sbjct: 236 TVG-PATLEPSLKALRRGGTLVLVGLPGGGPIPLLPAFLLILKEISIVGSLVGTRADLEE 294

Query: 309 MLEFCREKGVTSMI-EVIKMDYVNKAFERLEKNDVRYRFVVD 349
            L+F  E  +   I E I +D +N+A+ER+EK  VR R V+D
Sbjct: 295 ALDFAAEGKIKPEILETIPLDEINEAYERMEKGKVRGRAVID 336

Length = 339

>gnl|CDD|176207 cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD) and related proteins

 Score =  347 bits (892), Expect = e-119
 Identities = 146/342 (42%), Positives = 197/342 (57%), Gaps = 18/342 (5%)

Query: 13  WAAKDPS--GILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHE 70
            AA   +  G L P    +   G  +V IK+  CG+CHTD+H  + D G S YP+VPGHE
Sbjct: 1   KAAVVHAAGGPLEPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWGGSKYPLVPGHE 60

Query: 71  VVGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKP 130
           +VGEV EVG+ V   KVGD+VGVG LVG C  C  C   +E  C K +         G  
Sbjct: 61  IVGEVVEVGAGVEGRKVGDRVGVGWLVGSCGRCEYCRRGLENLCQKAV-------NTGYT 113

Query: 131 TQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLG 190
           TQGG+AE MV D ++ V +PDG+ L QAAPLLCAG+TV+S L   G +  G R  +LG+G
Sbjct: 114 TQGGYAEYMVADAEYTVLLPDGLPLAQAAPLLCAGITVYSALRDAGPR-PGERVAVLGIG 172

Query: 191 GVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIID 250
           G+GH+ V  A+AMG     I+ S  KR  A + LGAD+ + S      Q AA   D I+ 
Sbjct: 173 GLGHLAVQYARAMGFETVAITRSPDKRELARK-LGADEVVDSGAELDEQAAAGGADVILV 231

Query: 251 TVPANHPLEPYLSLLKLDGKLILTGV----INTPMQFLTPMVMLGRKAITGSFIGSMKET 306
           TV +    E  L  L+  G+++L G+      +P  F  P++M  R++I GS  G   + 
Sbjct: 232 TVVSGAAAEAALGGLRRGGRIVLVGLPESPPFSPDIF--PLIM-KRQSIAGSTHGGRADL 288

Query: 307 KEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVV 348
           +E L+F  E  V  MIE   +D  N+A+ER+EK DVR+RFV+
Sbjct: 289 QEALDFAAEGKVKPMIETFPLDQANEAYERMEKGDVRFRFVL 330

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes, or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 330

>gnl|CDD|176257 cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CAD)

 Score =  254 bits (651), Expect = 1e-82
 Identities = 118/330 (35%), Positives = 167/330 (50%), Gaps = 25/330 (7%)

Query: 33  GAEDVYIKVLYCGICHTDIHQIKNDLGM-SNYPMVPGHEVVGEVKEVGSEVSNFKVGDKV 91
           G  +V +K+   G+CHTD+H    D  +    P++ GHE  G V  VG  VS  KVGD+V
Sbjct: 25  GPGEVLVKLEASGVCHTDLHAALGDWPVKPKLPLIGGHEGAGVVVAVGPGVSGLKVGDRV 84

Query: 92  GVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPD 151
           GV  L   C  C  C    E  C  +  S       G    G FAE  + D ++V  IPD
Sbjct: 85  GVKWLYDACGKCEYCRTGDETLCPNQKNS-------GYTVDGTFAEYAIADARYVTPIPD 137

Query: 152 GMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGG----ILGLGG-VGHMGVLIAKAMGHH 206
           G++ EQAAPLLCAGVTV+       LK++GL+ G    I G GG +GH+GV  AKAMG  
Sbjct: 138 GLSFEQAAPLLCAGVTVYK-----ALKKAGLKPGDWVVISGAGGGLGHLGVQYAKAMGLR 192

Query: 207 VTVISSSDKKRVEAMEHLGADQYL---VSSDATRMQEAADS--LDYIIDTVPANHPLEPY 261
           V  I   D+K   A E LGAD ++    S D   ++E         ++ T  +    E  
Sbjct: 193 VIAIDVGDEKLELAKE-LGADAFVDFKKSDDVEAVKELTGGGGAHAVVVTAVSAAAYEQA 251

Query: 262 LSLLKLDGKLILTGVINTPMQFLTPMVMLGR-KAITGSFIGSMKETKEMLEFCREKGVTS 320
           L  L+  G L+  G+       L P  ++ R   I GS +G+ ++ +E LEF     V  
Sbjct: 252 LDYLRPGGTLVCVGLPPGGFIPLDPFDLVLRGITIVGSLVGTRQDLQEALEFAARGKVKP 311

Query: 321 MIEVIKMDYVNKAFERLEKNDVRYRFVVDV 350
            I+V+ ++ +N+ FE++E+  +  R VVD 
Sbjct: 312 HIQVVPLEDLNEVFEKMEEGKIAGRVVVDF 341

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341

>gnl|CDD|176256 cd08296, CAD_like, Cinnamyl alcohol dehydrogenases (CAD)

 Score =  251 bits (642), Expect = 2e-81
 Identities = 109/325 (33%), Positives = 167/325 (51%), Gaps = 25/325 (7%)

Query: 33  GAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVG 92
           G  +V IKV  CG+CH+D    +  +   +YP VPGHEVVG +  VG  VS +KVGD+VG
Sbjct: 24  GPGEVLIKVEACGVCHSDAFVKEGAMPGLSYPRVPGHEVVGRIDAVGEGVSRWKVGDRVG 83

Query: 93  VGVLVGCCRNCRPCEADVEQYC-NKKI--WSYNDVYTDGKPTQGGFAESMVVDQKFVVKI 149
           VG   G C  C  C      +C N K+   + +          GG+AE M+   + + +I
Sbjct: 84  VGWHGGHCGTCDACRRGDFVHCENGKVTGVTRD----------GGYAEYMLAPAEALARI 133

Query: 150 PDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTV 209
           PD +   +AAPLLCAGVT F+ L + G K  G    + G+GG+GH+ V  A  MG     
Sbjct: 134 PDDLDAAEAAPLLCAGVTTFNALRNSGAKP-GDLVAVQGIGGLGHLAVQYAAKMGFRTVA 192

Query: 210 ISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSL------DYIIDTVPANHPLEPYLS 263
           IS    K   A + LGA  Y+ +S     ++ A++L        I+ T P    +   + 
Sbjct: 193 ISRGSDKADLARK-LGAHHYIDTSK----EDVAEALQELGGAKLILATAPNAKAISALVG 247

Query: 264 LLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIE 323
            L   GKL++ G    P+      +++GRK+I G   G+  ++++ L+F    GV  M+E
Sbjct: 248 GLAPRGKLLILGAAGEPVAVSPLQLIMGRKSIHGWPSGTALDSEDTLKFSALHGVRPMVE 307

Query: 324 VIKMDYVNKAFERLEKNDVRYRFVV 348
              ++  N+A++R+     R+R V+
Sbjct: 308 TFPLEKANEAYDRMMSGKARFRVVL 332

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADHs), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 333

>gnl|CDD|176258 cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CAD)

 Score =  205 bits (523), Expect = 1e-63
 Identities = 103/317 (32%), Positives = 157/317 (49%), Gaps = 18/317 (5%)

Query: 33  GAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVG 92
           G  +V IKV  CG+C TD+H ++ DL     P++PGHE+VG V+ VG  V+ F VGD+VG
Sbjct: 28  GPGEVLIKVEACGVCRTDLHIVEGDLPPPKLPLIPGHEIVGRVEAVGPGVTRFSVGDRVG 87

Query: 93  VGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDG 152
           V  L   C  CR C +  E  C+   ++       G    GG+AE MV D++F   IP+ 
Sbjct: 88  VPWLGSTCGECRYCRSGRENLCDNARFT-------GYTVDGGYAEYMVADERFAYPIPED 140

Query: 153 MALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISS 212
              E+AAPLLCAG+  +  L   GLK    R G+ G G   H+ + IA+  G  V   + 
Sbjct: 141 YDDEEAAPLLCAGIIGYRALKLAGLKPGQ-RLGLYGFGASAHLALQIARYQGAEVFAFTR 199

Query: 213 SDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPYLSLLKLDGKLI 272
           S + +  A E LGAD +   SD        + LD  I   P    +   L  +K  G+++
Sbjct: 200 SGEHQELARE-LGAD-WAGDSDDLP----PEPLDAAIIFAPVGALVPAALRAVKKGGRVV 253

Query: 273 LTGVINTPM-QFLTPMVML-GRKAITGSFIGSMKETKEMLEFCREKGVTSMIEVIKMDYV 330
           L G+  + +  F     +L G K I      + ++ +E L+   E  +   +E   ++  
Sbjct: 254 LAGIHMSDIPAF--DYELLWGEKTIRSVANLTRQDGEEFLKLAAEIPIKPEVETYPLEEA 311

Query: 331 NKAFERLEKNDVRYRFV 347
           N+A + L++  +R   V
Sbjct: 312 NEALQDLKEGRIRGAAV 328

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 329

>gnl|CDD|176187 cd05284, arabinose_DH_like, D-arabinose dehydrogenase

 Score =  193 bits (493), Expect = 6e-59
 Identities = 101/336 (30%), Positives = 149/336 (44%), Gaps = 41/336 (12%)

Query: 33  GAEDVYIKVLYCGICHTDIH----QIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVG 88
           G   V ++V   G+CH+D+H         L     P   GHE  G V+EVGS V   K G
Sbjct: 24  GPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYK-LPFTLGHENAGWVEEVGSGVDGLKEG 82

Query: 89  DKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVK 148
           D V V    G C  CR C    E YC    +        G  T GGFAE ++V  + +VK
Sbjct: 83  DPVVVHPPWG-CGTCRYCRRGEENYCENARFP-------GIGTDGGFAEYLLVPSRRLVK 134

Query: 149 IPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGG------ILGLGGVGHMGVLIAKA 202
           +P G+   +AAPL  AG+T +       +K++           ++G+GG+GH+ V I +A
Sbjct: 135 LPRGLDPVEAAPLADAGLTAYH-----AVKKALPYLDPGSTVVVIGVGGLGHIAVQILRA 189

Query: 203 MGHHVTVI--SSSDKKRVEAMEHLGADQYLVSSDATRMQEAADS-----LDYIIDTVPAN 255
           +    TVI    S++    A E LGAD  L +SD    +E  +       D +ID V ++
Sbjct: 190 LT-PATVIAVDRSEEALKLA-ERLGADHVLNASDDVV-EEVRELTGGRGADAVIDFVGSD 246

Query: 256 HPLEPYLSLLKLDGKLILTGV---INTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEF 312
             L     LL   G+ ++ G       P   L P       ++ GS  G+  E  E++  
Sbjct: 247 ETLALAAKLLAKGGRYVIVGYGGHGRLPTSDLVPT----EISVIGSLWGTRAELVEVVAL 302

Query: 313 CREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVV 348
                V   I    ++  N+A +RL +  V  R V+
Sbjct: 303 AESGKVKVEITKFPLEDANEALDRLREGRVTGRAVL 338

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 340

>gnl|CDD|176202 cd08240, 6_hydroxyhexanoate_dh_like, 6-hydroxyhexanoate dehydrogenase

 Score =  191 bits (488), Expect = 3e-58
 Identities = 101/337 (29%), Positives = 158/337 (46%), Gaps = 32/337 (9%)

Query: 32  TGAEDVYIKVLYCGICHTDIHQIKN--DLGMSN----------YPMVPGHEVVGEVKEVG 79
            G E V +KV  CG+CH+D+H      DLG              P+V GHE+VGEV  VG
Sbjct: 24  PGTE-VLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGHEIVGEVVAVG 82

Query: 80  SEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKK--IWSYNDVYTDGKPTQGGFAE 137
            + ++ KVGDKV V   +GC   C  C A  E  C K   +  + D         GG+AE
Sbjct: 83  PDAADVKVGDKVLVYPWIGCGE-CPVCLAGDENLCAKGRALGIFQD---------GGYAE 132

Query: 138 SMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGV 197
            ++V     +  P G+    AA L C+G+T +S +       +     I+G GG+G M +
Sbjct: 133 YVIVPHSRYLVDPGGLDPALAATLACSGLTAYSAVKKLMPLVADEPVVIIGAGGLGLMAL 192

Query: 198 LIAKAMGH-HVTVISSSDKKRVEAMEHLGADQYLVSSDAT---RMQEAADS-LDYIIDTV 252
            + KA+G  ++ V+   + K   A    GAD  +  SD     R+ +AA   +D +ID V
Sbjct: 193 ALLKALGPANIIVVDIDEAKLEAAKA-AGADVVVNGSDPDAAKRIIKAAGGGVDAVIDFV 251

Query: 253 PANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEF 312
             +        +L   GKL+L G+         P++ L    I GS++GS++E +E++  
Sbjct: 252 NNSATASLAFDILAKGGKLVLVGLFGGEATLPLPLLPLRALTIQGSYVGSLEELRELVAL 311

Query: 313 CREKGVTSM-IEVIKMDYVNKAFERLEKNDVRYRFVV 348
            +   +  + +    +  VN A + L+   V  R V+
Sbjct: 312 AKAGKLKPIPLTERPLSDVNDALDDLKAGKVVGRAVL 348

6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 350

>gnl|CDD|176178 cd05188, MDR, Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  188 bits (480), Expect = 6e-58
 Identities = 87/285 (30%), Positives = 129/285 (45%), Gaps = 23/285 (8%)

Query: 36  DVYIKVLYCGICHTDIHQIKNDLGMS-NYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVG 94
           +V ++V   G+C TD+H  +         P++ GHE  G V EVG  V+  KVGD+V V 
Sbjct: 1   EVLVRVEAAGLCGTDLHIRRGGYPPPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVL 60

Query: 95  VLVGC--CRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDG 152
             +GC  C  CR                       G+   GGFAE +VV    +V +PDG
Sbjct: 61  PNLGCGTCELCRELCPGGGIL--------------GEGLDGGFAEYVVVPADNLVPLPDG 106

Query: 153 MALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISS 212
           ++LE+AA L     T +  L   G+ + G    +LG GGVG +   +AKA G  V V   
Sbjct: 107 LSLEEAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGGVGLLAAQLAKAAGARVIVTDR 166

Query: 213 SDKKRVEAMEHLGADQYLVSSDATRMQEAA----DSLDYIIDTVPANHPLEPYLSLLKLD 268
           SD+K   A E LGAD  +   +    +E         D +ID V     L   L LL+  
Sbjct: 167 SDEKLELAKE-LGADHVIDYKEEDLEEELRLTGGGGADVVIDAVGGPETLAQALRLLRPG 225

Query: 269 GKLILTGVINTPMQFLTPM-VMLGRKAITGSFIGSMKETKEMLEF 312
           G++++ G  +          ++     I GS  G+ ++ +E L+ 
Sbjct: 226 GRIVVVGGTSGGPPLDDLRRLLFKELTIIGSTGGTREDFEEALDL 270

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 271

>gnl|CDD|176216 cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

 Score =  176 bits (448), Expect = 2e-52
 Identities = 97/323 (30%), Positives = 152/323 (47%), Gaps = 16/323 (4%)

Query: 33  GAEDVYIKVLYCGICHTDIHQIKNDLGMSNY--PMVPGHEVVGEVKEVGSEVSNFKVGDK 90
           G  +V +KV   G+CH+D+H I +    +    P+  GHE+ G V EVG+ V+NFKVGD+
Sbjct: 25  GPGEVLVKVKAAGVCHSDLH-ILDGGVPTLTKLPLTLGHEIAGTVVEVGAGVTNFKVGDR 83

Query: 91  VGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIP 150
           V V  ++ C   C  C       C  +               GGFAE +VV  + +V +P
Sbjct: 84  VAVPAVIPC-GACALCRRGRGNLCLNQGMPGLG-------IDGGFAEYIVVPARALVPVP 135

Query: 151 DGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVI 210
           DG+   QAA    A +T +  +   G  + G    ++GLGG+G   V IAKAMG  V  +
Sbjct: 136 DGVPFAQAAVATDAVLTPYHAVVRAGEVKPGETVLVIGLGGLGLNAVQIAKAMGAAVIAV 195

Query: 211 SSSDKKRVEAMEHLGADQYLVSSDATRMQEAA----DSLDYIIDTVPANHPLEPYLSLLK 266
              ++K   A E  GAD+ L S D +   + A       D I D V      E     +K
Sbjct: 196 DIKEEKLELAKEL-GADEVLNSLDDSPKDKKAAGLGGGFDVIFDFVGTQPTFEDAQKAVK 254

Query: 267 LDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEVIK 326
             G++++ G+    +      ++     I GSF G+ ++  E+L+   +  +   +E   
Sbjct: 255 PGGRIVVVGLGRDKLTVDLSDLIARELRIIGSFGGTPEDLPEVLDLIAKGKLDPQVETRP 314

Query: 327 MDYVNKAFERLEKNDVRYRFVVD 349
           +D + +  ERL K  V+ R V+ 
Sbjct: 315 LDEIPEVLERLHKGKVKGRVVLV 337

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 338

>gnl|CDD|176220 cd08259, Zn_ADH5, Alcohol dehydrogenases of the MDR family

 Score =  162 bits (413), Expect = 3e-47
 Identities = 95/320 (29%), Positives = 157/320 (49%), Gaps = 14/320 (4%)

Query: 33  GAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVG 92
           G  +V IKV   G+C+ D+   K       YP++ GHE+VG V+EVG  V  FK GD+V 
Sbjct: 24  GPGEVLIKVKAAGVCYRDLLFWKGFFPRGKYPLILGHEIVGTVEEVGEGVERFKPGDRVI 83

Query: 93  VGVLVGCCRNCRPCEADVEQYC-NKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPD 151
           +   + C + C  C +  E  C N+  +        G+   GGFAE + V ++ +VK+PD
Sbjct: 84  LYYYIPCGK-CEYCLSGEENLCRNRAEY--------GEEVDGGFAEYVKVPERSLVKLPD 134

Query: 152 GMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVIS 211
            ++ E AA   C   T    L   G+K+          GGVG   + +AKA+G  V  ++
Sbjct: 135 NVSDESAALAACVVGTAVHALKRAGVKKGDTVLVTGAGGGVGIHAIQLAKALGARVIAVT 194

Query: 212 SSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPYLSLLKLDGKL 271
            S +K  + ++ LGAD  +  S  +   +     D +I+ V  +  +E  L  L   G+L
Sbjct: 195 RSPEKL-KILKELGADYVIDGSKFSEDVKKLGGADVVIELV-GSPTIEESLRSLNKGGRL 252

Query: 272 ILTGVINTPMQFLTP-MVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIE-VIKMDY 329
           +L G +      L P +++L    I GS   +  + +E L+  +E  +  +I+ V+ ++ 
Sbjct: 253 VLIGNVTPDPAPLRPGLLILKEIRIIGSISATKADVEEALKLVKEGKIKPVIDRVVSLED 312

Query: 330 VNKAFERLEKNDVRYRFVVD 349
           +N+A E L+   V  R V+ 
Sbjct: 313 INEALEDLKSGKVVGRIVLK 332

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 332

>gnl|CDD|181842 PRK09422, PRK09422, ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional

 Score =  147 bits (372), Expect = 3e-41
 Identities = 93/331 (28%), Positives = 156/331 (47%), Gaps = 23/331 (6%)

Query: 28  TLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKV 87
           TLR     +  +K+ YCG+CHTD+H    D G      + GHE +G VKEVG  V++ KV
Sbjct: 19  TLRPLKHGEALVKMEYCGVCHTDLHVANGDFGDKT-GRILGHEGIGIVKEVGPGVTSLKV 77

Query: 88  GDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVV 147
           GD+V +      C +C  C    E  C         V   G    GG AE  +V   + V
Sbjct: 78  GDRVSIAWFFEGCGHCEYCTTGRETLC-------RSVKNAGYTVDGGMAEQCIVTADYAV 130

Query: 148 KIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGG----ILGLGGVGHMGVLIAK-A 202
           K+P+G+   QA+ + CAGVT +       +K SG++ G    I G GG+G++ +  AK  
Sbjct: 131 KVPEGLDPAQASSITCAGVTTYK-----AIKVSGIKPGQWIAIYGAGGLGNLALQYAKNV 185

Query: 203 MGHHVTVISSSDKKRVEAMEHLGADQYLVSSD----ATRMQEAADSLDYIIDTVPANHPL 258
               V  +  +D K +   + +GAD  + S      A  +QE        + T  A    
Sbjct: 186 FNAKVIAVDINDDK-LALAKEVGADLTINSKRVEDVAKIIQEKTGGAHAAVVTAVAKAAF 244

Query: 259 EPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGV 318
              +  ++  G+++  G+    M    P ++L    + GS +G+ ++ +E  +F  E  V
Sbjct: 245 NQAVDAVRAGGRVVAVGLPPESMDLSIPRLVLDGIEVVGSLVGTRQDLEEAFQFGAEGKV 304

Query: 319 TSMIEVIKMDYVNKAFERLEKNDVRYRFVVD 349
              +++  ++ +N  F+ +E+  ++ R V+D
Sbjct: 305 VPKVQLRPLEDINDIFDEMEQGKIQGRMVID 335

Length = 338

>gnl|CDD|176196 cd08234, threonine_DH_like, L-threonine dehydrogenase

 Score =  141 bits (359), Expect = 3e-39
 Identities = 94/327 (28%), Positives = 146/327 (44%), Gaps = 36/327 (11%)

Query: 33  GAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVG 92
           G ++V IKV  CGIC TD+H I      +  P+VPGHE  G V  VGS+V+ FKVGD+V 
Sbjct: 23  GPDEVLIKVAACGICGTDLH-IYEGEFGAAPPLVPGHEFAGVVVAVGSKVTGFKVGDRVA 81

Query: 93  VGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDG 152
           V   +  C  C  C       C     +   V  +     GGFAE +VV  K V KIPD 
Sbjct: 82  VDPNIY-CGECFYCRRGRPNLCEN--LTAVGVTRN-----GGFAEYVVVPAKQVYKIPDN 133

Query: 153 MALEQAA---PLLCAGVTVFSPLSHFGLKQSGLRGG----ILGLGGVGHMGVLIAKAMG- 204
           ++ E+AA   PL CA         H GL   G++ G    + G G +G +   + K  G 
Sbjct: 134 LSFEEAALAEPLSCA--------VH-GLDLLGIKPGDSVLVFGAGPIGLLLAQLLKLNGA 184

Query: 205 HHVTVISSSDKKRVEAMEHLGADQY---LVSSDATRMQEAADSLDYIIDTVPANHPLEPY 261
             VTV   +++K  E  + LGA +           + ++     D +I+       LE  
Sbjct: 185 SRVTVAEPNEEKL-ELAKKLGATETVDPSREDPEAQKEDNPYGFDVVIEATGVPKTLEQA 243

Query: 262 LSLLKLDGKLILTGVINTPMQF-LTPMVMLGRKA-ITGSFI--GSMKETKEMLEFCREKG 317
           +   +  G +++ GV     +  ++P  +  ++  I GSFI   +      +LE  +   
Sbjct: 244 IEYARRGGTVLVFGVYAPDARVSISPFEIFQKELTIIGSFINPYTFPRAIALLESGKID- 302

Query: 318 VTSMI-EVIKMDYVNKAFERLEKNDVR 343
           V  ++   + ++ V +A E +      
Sbjct: 303 VKGLVSHRLPLEEVPEALEGMRSGGAL 329

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 334

>gnl|CDD|223991 COG1063, Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

 Score =  140 bits (354), Expect = 2e-38
 Identities = 83/319 (26%), Positives = 132/319 (41%), Gaps = 18/319 (5%)

Query: 33  GAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVP-GHEVVGEVKEVGSEVSNFKVGDKV 91
           G  DV I+V   GIC +D+H  +          +  GHE VGEV EVG  V  FKVGD+V
Sbjct: 24  GPGDVLIRVTATGICGSDLHIYRGGEPFVPPGDIILGHEFVGEVVEVG-VVRGFKVGDRV 82

Query: 92  GVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPD 151
            V   +  C +CR C A     C    +        G    GGFAE + V   F +    
Sbjct: 83  VVEPNIP-CGHCRYCRAGEYNLCENPGFYGYAGLGGGID--GGFAEYVRVPADFNLAKLP 139

Query: 152 GMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMG-HHVTVI 210
               E+AA L     T +   +     + G    ++G G +G + + +AK +G   V V+
Sbjct: 140 DGIDEEAAALTEPLATAYHGHAERAAVRPGGTVVVVGAGPIGLLAIALAKLLGASVVIVV 199

Query: 211 SSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSL------DYIIDTVPANHPLEPYLSL 264
             S ++   A E  GAD  +V+            L      D +I+ V +   L+  L  
Sbjct: 200 DRSPERLELAKEAGGAD-VVVNPSEDDAGAEILELTGGRGADVVIEAVGSPPALDQALEA 258

Query: 265 LKLDGKLILTGVINTPMQFLTPMVMLGR-KAITGSFIGSMKET-KEMLEFCREKGV--TS 320
           L+  G +++ GV       L   +++ +   + GS   S +E  +  L+      +    
Sbjct: 259 LRPGGTVVVVGVYGGEDIPLPAGLVVSKELTLRGSLRPSGREDFERALDLLASGKIDPEK 318

Query: 321 MI-EVIKMDYVNKAFERLE 338
           +I   + +D   +A+E   
Sbjct: 319 LITHRLPLDDAAEAYELFA 337

Length = 350

>gnl|CDD|176197 cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenase

 Score =  135 bits (343), Expect = 7e-37
 Identities = 87/329 (26%), Positives = 150/329 (45%), Gaps = 39/329 (11%)

Query: 33  GAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVG 92
           G  +V +KV  CGIC TD+ +I+        P + GHE+ GE+ EVG  V+ FKVGD+V 
Sbjct: 23  GPGEVLVKVRACGICGTDVKKIRGGHTDLKPPRILGHEIAGEIVEVGDGVTGFKVGDRVF 82

Query: 93  VGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVV-----DQKFVV 147
           V   V  C  C  C    E  C        +    G    GGFAE + V      +  V+
Sbjct: 83  VAPHVP-CGECHYCLRGNENMC-------PNYKKFGNLYDGGFAEYVRVPAWAVKRGGVL 134

Query: 148 KIPDGMALEQAA---PLLCAGVTVFSPLSHFGLKQSGLRGG----ILGLGGVGHMGVLIA 200
           K+PD ++ E+AA   PL C              +++G++ G    ++G G +G +  ++A
Sbjct: 135 KLPDNVSFEEAALVEPLACC---------INAQRKAGIKPGDTVLVIGAGPIGLLHAMLA 185

Query: 201 KAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADS-----LDYIIDTVPAN 255
           KA G    ++S  ++ R+E  + LGAD  + +++   +++  +       D +I    + 
Sbjct: 186 KASGARKVIVSDLNEFRLEFAKKLGADYTIDAAEEDLVEKVRELTDGRGADVVIVATGSP 245

Query: 256 HPLEPYLSLLKLDGKLILTGVI--NTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFC 313
                 L L++  G+++  G +   + +     ++      ITGS+  S ++ KE LE  
Sbjct: 246 EAQAQALELVRKGGRILFFGGLPKGSTVNIDPNLIHYREITITGSYAASPEDYKEALELI 305

Query: 314 REKG--VTSMI-EVIKMDYVNKAFERLEK 339
                 V  +I     ++ + +AFE    
Sbjct: 306 ASGKIDVKDLITHRFPLEDIEEAFELAAD 334

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 343

>gnl|CDD|223990 COG1062, AdhC, Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

 Score =  132 bits (334), Expect = 2e-35
 Identities = 86/362 (23%), Positives = 137/362 (37%), Gaps = 33/362 (9%)

Query: 8   RATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVP 67
           RA +   A  P   L      L    A +V +++   G+CHTD H +  D     +P V 
Sbjct: 4   RAAVAREAGKP---LEIEEVDLDPPRAGEVLVRITATGVCHTDAHTLSGDDPEG-FPAVL 59

Query: 68  GHEVVGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYC------NKKI--- 118
           GHE  G V+ VG  V++ K GD V + +    C  C+ C +     C        K    
Sbjct: 60  GHEGAGIVEAVGEGVTSVKPGDHV-ILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMP 118

Query: 119 -----WSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLS 173
                 S N V          FAE  VV +  +VKI     LE+A  L C   T    + 
Sbjct: 119 DGTTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVKIDPDAPLEKACLLGCGVTTGIGAVV 178

Query: 174 HFGLKQSGLRGGILGLGGVGHMGVLIAKAMG-HHVTVISSSDKKRVEAMEHLGADQYLVS 232
           +    + G    + GLGGVG   +  AKA G   +  +  + +K   A +  GA  ++  
Sbjct: 179 NTAKVEPGDTVAVFGLGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKK-FGATHFVNP 237

Query: 233 SDATRMQEAADSL-----DYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPM 287
            +   + EA   L     DY  + V     +   L      G  ++ GV     +  T  
Sbjct: 238 KEVDDVVEAIVELTDGGADYAFECVGNVEVMRQALEATHRGGTSVIIGVAGAGQEISTRP 297

Query: 288 VML-GRKAITGSFIGSMKETKEMLEFCRE--KG---VTSMI-EVIKMDYVNKAFERLEKN 340
             L   +   GS  G  +   ++         G   +  ++   I ++ +N+AF+ + + 
Sbjct: 298 FQLVTGRVWKGSAFGGARPRSDIPRLVDLYMAGKLPLDRLVTHTIPLEDINEAFDLMHEG 357

Query: 341 DV 342
             
Sbjct: 358 KS 359

Length = 366

>gnl|CDD|184316 PRK13771, PRK13771, putative alcohol dehydrogenase; Provisional

 Score =  131 bits (332), Expect = 2e-35
 Identities = 93/320 (29%), Positives = 154/320 (48%), Gaps = 34/320 (10%)

Query: 33  GAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVG 92
           G ++V IKV Y G+C+ D+ Q++       YP++ GHEVVG V+EVG  V  FK GD+V 
Sbjct: 24  GKDEVVIKVNYAGLCYRDLLQLQGFYPRMKYPVILGHEVVGTVEEVGENVKGFKPGDRV- 82

Query: 93  VGVLVGCCRNCRPCEADVEQYC-NKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPD 151
             +L      C  C +  E YC N+  +        G+   G FAE   V    +VK+P 
Sbjct: 83  ASLLYAPDGTCEYCRSGEEAYCKNRLGY--------GEELDGFFAEYAKVKVTSLVKVPP 134

Query: 152 GMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGL-----GGVGHMGVLIAKAMGHH 206
            ++ E A  + C    V     + GL+++G++ G   L     GGVG   + +AKA+G  
Sbjct: 135 NVSDEGAVIVPCVTGMV-----YRGLRRAGVKKGETVLVTGAGGGVGIHAIQVAKALGAK 189

Query: 207 VTVISSSDKKRVEAMEHLGADQYLV----SSDATRMQEAADSLDYIIDTVPANHPLEPYL 262
           V  ++SS+ K  + +    AD  +V    S +  ++  A    D +I+TV     LE  L
Sbjct: 190 VIAVTSSESK-AKIVSKY-ADYVIVGSKFSEEVKKIGGA----DIVIETV-GTPTLEESL 242

Query: 263 SLLKLDGKLILTGVINTPMQFLTPM--VMLGRKAITGSFIGSMKETKEMLEFCREKGVTS 320
             L + GK+I  G ++    +   +  ++L    I G    + ++ +E L+   E  +  
Sbjct: 243 RSLNMGGKIIQIGNVDPSPTYSLRLGYIILKDIEIIGHISATKRDVEEALKLVAEGKIKP 302

Query: 321 MIEV-IKMDYVNKAFERLEK 339
           +I   + +  ++KA E L+ 
Sbjct: 303 VIGAEVSLSEIDKALEELKD 322

Length = 334

>gnl|CDD|176240 cd08279, Zn_ADH_class_III, Class III alcohol dehydrogenase

 Score =  131 bits (331), Expect = 5e-35
 Identities = 89/342 (26%), Positives = 139/342 (40%), Gaps = 50/342 (14%)

Query: 33  GAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVG 92
           G  +V +++   G+CH+D+H +  DL     P V GHE  G V+EVG  V+  K GD V 
Sbjct: 24  GPGEVLVRIAAAGLCHSDLHVVTGDLPAP-LPAVLGHEGAGVVEEVGPGVTGVKPGDHV- 81

Query: 93  VGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKP--TQGG-----------FAESM 139
           V   +  C  CR C       C+           DG    T  G           FAE  
Sbjct: 82  VLSWIPACGTCRYCSRGQPNLCDLGAGILGGQLPDGTRRFTADGEPVGAMCGLGTFAEYT 141

Query: 140 VVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFG--LKQSGLRGG----ILGLGGVG 193
           VV +  VVKI D + L++AA L C GVT     +  G  +  + +R G    ++G GGVG
Sbjct: 142 VVPEASVVKIDDDIPLDRAALLGC-GVT-----TGVGAVVNTARVRPGDTVAVIGCGGVG 195

Query: 194 HMGVL----IAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSL---- 245
            +  +    IA A    +  +    +K   A    GA  + V++      EA   L    
Sbjct: 196 -LNAIQGARIAGA--SRIIAVDPVPEKLELARR-FGAT-HTVNASEDDAVEAVRDLTDGR 250

Query: 246 --DYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMV--MLGRKAITGSFIG 301
             DY  + V     +   L++ +  G  ++ G+         P +   L  K + GS  G
Sbjct: 251 GADYAFEAVGRAATIRQALAMTRKGGTAVVVGMGPPGETVSLPALELFLSEKRLQGSLYG 310

Query: 302 SMKETKEMLEFCR--EKG---VTSMI-EVIKMDYVNKAFERL 337
           S    +++         G   +  ++     +D +N+AF  +
Sbjct: 311 SANPRRDIPRLLDLYRAGRLKLDELVTRRYSLDEINEAFADM 352

Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 363

>gnl|CDD|223677 COG0604, Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

 Score =  128 bits (323), Expect = 3e-34
 Identities = 77/303 (25%), Positives = 123/303 (40%), Gaps = 52/303 (17%)

Query: 33  GAEDVYIKVLYCGICHTDIHQIKNDLGMSN-YPMVPGHEVVGEVKEVGSEVSNFKVGDKV 91
           G  +V ++V   G+   D+   +         P +PG E  G V  VGS V+ FKVGD+V
Sbjct: 26  GPGEVLVRVKAAGVNPIDVLVRQGLAPPVRPLPFIPGSEAAGVVVAVGSGVTGFKVGDRV 85

Query: 92  GVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPD 151
                                               G    GG+AE +VV   ++V +PD
Sbjct: 86  --------------------------------AALGGVGRDGGYAEYVVVPADWLVPLPD 113

Query: 152 GMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGG--IL---GLGGVGHMGVLIAKAMGHH 206
           G++ E+AA L  AG+T +  L        GL+ G  +L     GGVG   + +AKA+G  
Sbjct: 114 GLSFEEAAALPLAGLTAWLALFDRA----GLKPGETVLVHGAAGGVGSAAIQLAKALGAT 169

Query: 207 VTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSL------DYIIDTVPANHPLEP 260
           V  + SS +K  E ++ LGAD  +++       E    L      D ++DTV        
Sbjct: 170 VVAVVSSSEKL-ELLKELGADH-VINYREEDFVEQVRELTGGKGVDVVLDTV-GGDTFAA 226

Query: 261 YLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTS 320
            L+ L   G+L+  G ++        ++ L  K +T   +       E L     + +  
Sbjct: 227 SLAALAPGGRLVSIGALSGGPPVPLNLLPLLGKRLTLRGVTLGSRDPEALAEALAE-LFD 285

Query: 321 MIE 323
           ++ 
Sbjct: 286 LLA 288

Length = 326

>gnl|CDD|176198 cd08236, sugar_DH, NAD(P)-dependent sugar dehydrogenases

 Score =  128 bits (323), Expect = 4e-34
 Identities = 75/252 (29%), Positives = 118/252 (46%), Gaps = 23/252 (9%)

Query: 33  GAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVG 92
           G  +V +KV  CGIC +DI +     G  + P+V GHE  G V+EVGS V +  VGD+V 
Sbjct: 23  GPGEVLVKVKACGICGSDIPRYLG-TGAYHPPLVLGHEFSGTVEEVGSGVDDLAVGDRVA 81

Query: 93  VGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDG 152
           V  L+  C  C  C+      C+       D    G    G FAE + V  + ++KIPD 
Sbjct: 82  VNPLLP-CGKCEYCKKGEYSLCSN-----YDYI--GSRRDGAFAEYVSVPARNLIKIPDH 133

Query: 153 MALEQAA---PLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMG-HHVT 208
           +  E+AA   P   A   V   L+   L  + +   ++G G +G + +   K +G   V 
Sbjct: 134 VDYEEAAMIEPAAVALHAVR--LAGITLGDTVV---VIGAGTIGLLAIQWLKILGAKRVI 188

Query: 209 VISSSDKKRVEAMEHLGADQYLVSS--DATRMQEAADSL--DYIIDTVPANHPLEPYLSL 264
            +   D+K       LGAD  +     D  +++E  +    D +I+   +   +E  L+L
Sbjct: 189 AVDIDDEKL-AVARELGADDTINPKEEDVEKVRELTEGRGADLVIEAAGSPATIEQALAL 247

Query: 265 LKLDGKLILTGV 276
            +  GK++L G+
Sbjct: 248 ARPGGKVVLVGI 259

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Horse liver alcohol dehydrogenase is a dimeric enzyme and each subunit has two domains. The NAD binding domain is in a Rossmann fold and the catalytic domain contains a zinc ion to which substrates bind. There is a cleft between the domains that closes upon formation of the ternary complex. Length = 343

>gnl|CDD|176224 cd08263, Zn_ADH10, Alcohol dehydrogenases of the MDR family

 Score =  127 bits (322), Expect = 7e-34
 Identities = 93/350 (26%), Positives = 155/350 (44%), Gaps = 39/350 (11%)

Query: 33  GAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSN---FKVGD 89
              ++ I+V  CG+CH+D+H +K +L     P V GHE+ GEV EVG  V N     VGD
Sbjct: 24  KEGEILIRVAACGVCHSDLHVLKGELPFPP-PFVLGHEISGEVVEVGPNVENPYGLSVGD 82

Query: 90  KVGVGVLVGCCRNCRPCEADVEQYC------NKKIWSYNDVYT-----DGKPTQ----GG 134
           +V VG  +  C  CR C    E  C      N+   +  D  T     DG P      GG
Sbjct: 83  RV-VGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVYMYSMGG 141

Query: 135 FAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGH 194
            AE  VV    +  +P+ +   ++A L CAG T +  L H    + G    ++G+GGVG 
Sbjct: 142 LAEYAVVPATALAPLPESLDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIGVGGVGS 201

Query: 195 MGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSD---ATRMQEAAD--SLDYII 249
             + +AKA G    +      +++   + LGA   + ++       ++E      +D ++
Sbjct: 202 SAIQLAKAFGASPIIAVDVRDEKLAKAKELGATHTVNAAKEDAVAAIREITGGRGVDVVV 261

Query: 250 DTVPANHPLEPYLSLLKLDGKLILTGVINTPMQF---LTPMVMLGRKAITGSFIG----S 302
           + +      +  L +++  G+ ++ G+          +T +V  G K I GS+       
Sbjct: 262 EALGKPETFKLALDVVRDGGRAVVVGLAPGGATAEIPITRLVRRGIK-IIGSYGARPRQD 320

Query: 303 MKETKEMLE---FCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVD 349
           + E   +        E  VT      K++ +N+A+E L K  +  R +V+
Sbjct: 321 LPELVGLAASGKLDPEALVTH---KYKLEEINEAYENLRKGLIHGRAIVE 367

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 367

>gnl|CDD|219758 pfam08240, ADH_N, Alcohol dehydrogenase GroES-like domain

 Score =  117 bits (296), Expect = 9e-33
 Identities = 39/115 (33%), Positives = 58/115 (50%), Gaps = 10/115 (8%)

Query: 36  DVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVGV 95
           +V ++V   GIC +D+H  + +      P++ GHE  G V+EVG  V+  KVGD+V V  
Sbjct: 3   EVLVRVKAAGICGSDLHIYRGEPPPVKLPLILGHEGAGIVEEVGPGVTGLKVGDRVVVYP 62

Query: 96  LVGCCRNCRPCEADVEQYC-NKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKI 149
           L+ C + C  C    E  C N K    +          GGFAE +VV  + +V +
Sbjct: 63  LIPCGK-CAACREGRENLCPNGKFLGVH--------LDGGFAEYVVVPARNLVPL 108

This is the catalytic domain of alcohol dehydrogenases. Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure. Length = 108

>gnl|CDD|176228 cd08267, MDR1, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  123 bits (311), Expect = 1e-32
 Identities = 87/330 (26%), Positives = 127/330 (38%), Gaps = 67/330 (20%)

Query: 33  GAEDVYIKVLYCGICHTDIHQIKNDLG---MSNYPMVPGHEVVGEVKEVGSEVSNFKVGD 89
              +V +KV    +   D    +          +P +PG +  GEV  VGS V+ FKVGD
Sbjct: 25  KPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSGVTRFKVGD 84

Query: 90  KVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKI 149
           +V  G L                                    G  AE +V  +  + K 
Sbjct: 85  EV-FGRL-------------------------------PPKGGGALAEYVVAPESGLAKK 112

Query: 150 PDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGIL---GLGGVGHMGVLIAKAMGHH 206
           P+G++ E+AA L  AG+T    L   G  + G R  +L     GGVG   V IAKA+G H
Sbjct: 113 PEGVSFEEAAALPVAGLTALQALRDAGKVKPGQR--VLINGASGGVGTFAVQIAKALGAH 170

Query: 207 VTVISSSDKKRVEAMEHLGADQYL--VSSDATRMQEAADSLDYIIDTVPANHPLEPY--L 262
           VT + S+     E +  LGAD+ +   + D   +    +  D I D V  N P   Y   
Sbjct: 171 VTGVCSTRN--AELVRSLGADEVIDYTTEDFVALTAGGEKYDVIFDAV-GNSPFSLYRAS 227

Query: 263 SLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGS---FIGSMKETKEMLEFCREKGVT 319
             LK  G+ +  G    P   L  +++L      G         K   E LE   E    
Sbjct: 228 LALKPGGRYVSVGG--GPSGLLLVLLLLPLTLGGGGRRLKFFLAKPNAEDLEQLAE---- 281

Query: 320 SMIE------VI----KMDYVNKAFERLEK 339
            ++E      VI     ++   +A+ RL+ 
Sbjct: 282 -LVEEGKLKPVIDSVYPLEDAPEAYRRLKS 310

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319

>gnl|CDD|176191 cd05289, MDR_like_2, alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

 Score =  123 bits (310), Expect = 2e-32
 Identities = 81/334 (24%), Positives = 134/334 (40%), Gaps = 68/334 (20%)

Query: 33  GAEDVYIKVLYCGICHTDIHQIKNDLGMSNY---PMVPGHEVVGEVKEVGSEVSNFKVGD 89
           G  +V +KV   G+   D+   +  L  +     P++PGH+V G V  VG  V+ FKVGD
Sbjct: 26  GPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAGVVVAVGPGVTGFKVGD 85

Query: 90  KVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKI 149
           +V  G+                                     G +AE +VV    +   
Sbjct: 86  EV-FGMT-------------------------------PFTRGGAYAEYVVVPADELALK 113

Query: 150 PDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGIL---GLGGVGHMGVLIAKAMGHH 206
           P  ++ E+AA L  AG+T +  L   G  ++G    +L     GGVG   V +AKA G  
Sbjct: 114 PANLSFEEAAALPLAGLTAWQALFELGGLKAGQT--VLIHGAAGGVGSFAVQLAKARGAR 171

Query: 207 VTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAA--DSLDYIIDTVPANHPLEPYLSL 264
           V   +S+     + +  LGAD+ ++       + AA    +D ++DTV     L   L+L
Sbjct: 172 VIATASAAN--ADFLRSLGADE-VIDYTKGDFERAAAPGGVDAVLDTVGGE-TLARSLAL 227

Query: 265 LKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIE- 323
           +K  G+L+      +            R+ +   F+  ++   E L       +  ++E 
Sbjct: 228 VKPGGRLV------SIAGPPPAEQAAKRRGVRAGFVF-VEPDGEQLA-----ELAELVEA 275

Query: 324 ---------VIKMDYVNKAFERLEKNDVRYRFVV 348
                    V  ++   +A ERLE    R + V+
Sbjct: 276 GKLRPVVDRVFPLEDAAEAHERLESGHARGKVVL 309

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 309

>gnl|CDD|176195 cd08233, butanediol_DH_like, (2R,3R)-2,3-butanediol dehydrogenase

 Score =  123 bits (312), Expect = 2e-32
 Identities = 92/337 (27%), Positives = 143/337 (42%), Gaps = 47/337 (13%)

Query: 33  GAEDVYIKVLYCGICHTDIH---------QIKNDLGMSN--YPMVPGHEVVGEVKEVGSE 81
              +V IKV +CGIC +D+H           +    ++    P+  GHE  G V EVGS 
Sbjct: 23  KPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFSGVVVEVGSG 82

Query: 82  VSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVV 141
           V+ FKVGD+V V   +  C  C  C+  +   C   +              GGFAE +VV
Sbjct: 83  VTGFKVGDRVVVEPTIK-CGTCGACKRGLYNLC-DSLGFIGLGGGG-----GGFAEYVVV 135

Query: 142 DQKFVVKIPDGMALEQAAPLLCAGVTVFSPLS--HFGLKQSGLRGG----ILGLGGVGHM 195
               V K+PD + LE+AA        +  PL+     +++SG + G    +LG G +G +
Sbjct: 136 PAYHVHKLPDNVPLEEAA--------LVEPLAVAWHAVRRSGFKPGDTALVLGAGPIGLL 187

Query: 196 GVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRM--QEAADSL------DY 247
            +L  KA G    ++S   + R E  E LGA   L   D T +        L      D 
Sbjct: 188 TILALKAAGASKIIVSEPSEARRELAEELGATIVL---DPTEVDVVAEVRKLTGGGGVDV 244

Query: 248 IIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETK 307
             D       L+  +  L+  G  +   +   P+ F    ++L  K +TGS   + ++ +
Sbjct: 245 SFDCAGVQATLDTAIDALRPRGTAVNVAIWEKPISFNPNDLVLKEKTLTGSICYTREDFE 304

Query: 308 EMLEFCREK--GVTSMI-EVIKM-DYVNKAFERLEKN 340
           E+++           +I   I + D V K FE L  +
Sbjct: 305 EVIDLLASGKIDAEPLITSRIPLEDIVEKGFEELIND 341

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Length = 351

>gnl|CDD|176219 cd08258, Zn_ADH4, Alcohol dehydrogenases of the MDR family

 Score =  122 bits (307), Expect = 3e-32
 Identities = 80/280 (28%), Positives = 126/280 (45%), Gaps = 28/280 (10%)

Query: 33  GAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVG 92
           G  +V IKV   GIC +D+H  K D      P+V GHE  G + EVG +V  +KVGD+V 
Sbjct: 25  GPGEVLIKVAAAGICGSDLHIYKGDYDPVETPVVLGHEFSGTIVEVGPDVEGWKVGDRVV 84

Query: 93  VGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDG 152
                  C  C  C       C  +          G    GGFAE ++V ++ + ++P+ 
Sbjct: 85  SETTFSTCGRCPYCRRGDYNLCPHRK-------GIGTQADGGFAEYVLVPEESLHELPEN 137

Query: 153 MALEQAA---PLLCAGVTVFSPLSHFGLKQSGLRGG----ILGLGGVGHMGVLIAKAMGH 205
           ++LE AA   PL  A   V         ++SG+R G    + G G +G +   +AK  G 
Sbjct: 138 LSLEAAALTEPLAVAVHAVA--------ERSGIRPGDTVVVFGPGPIGLLAAQVAKLQGA 189

Query: 206 HVTVIS-SSDKKRVEAMEHLGADQYLVSSD--ATRMQE--AADSLDYIIDTVPANHPLEP 260
            V V+    D+ R++  + LGAD      +  A  + E    D  D +I+   A   LE 
Sbjct: 190 TVVVVGTEKDEVRLDVAKELGADAVNGGEEDLAELVNEITDGDGADVVIECSGAVPALEQ 249

Query: 261 YLSLLKLDGKLILTGVINTPMQFLTPMVMLGR-KAITGSF 299
            L LL+  G+++  G+       +    ++ +  ++ GS 
Sbjct: 250 ALELLRKGGRIVQVGIFGPLAASIDVERIIQKELSVIGSR 289

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 306

>gnl|CDD|131869 TIGR02822, adh_fam_2, zinc-binding alcohol dehydrogenase family protein

 Score =  121 bits (304), Expect = 1e-31
 Identities = 86/272 (31%), Positives = 119/272 (43%), Gaps = 26/272 (9%)

Query: 13  WAAKDP----SGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPG 68
           W  + P     G L      +   G  ++ ++V  CG+C TD+H  + DL +    + PG
Sbjct: 2   WEVERPGPIEDGPLRFVERPVPRPGPGELLVRVRACGVCRTDLHVSEGDLPVHRPRVTPG 61

Query: 69  HEVVGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDG 128
           HEVVGEV   G++   F VGD+VG+  L   C  CR C    E  C    ++       G
Sbjct: 62  HEVVGEVAGRGADAGGFAVGDRVGIAWLRRTCGVCRYCRRGAENLCPASRYT-------G 114

Query: 129 KPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILG 188
             T GG+AE   V   F  ++P G    + APLLCAG+  +  L    L   G R G+ G
Sbjct: 115 WDTDGGYAEYTTVPAAFAYRLPTGYDDVELAPLLCAGIIGYRALLRASLPPGG-RLGLYG 173

Query: 189 LGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADS---- 244
            GG  H+   +A A G  V V++     R  A+  LG         A     A D+    
Sbjct: 174 FGGSAHLTAQVALAQGATVHVMTRGAAARRLALA-LG---------AASAGGAYDTPPEP 223

Query: 245 LDYIIDTVPANHPLEPYLSLLKLDGKLILTGV 276
           LD  I   PA   + P L  L   G L + G+
Sbjct: 224 LDAAILFAPAGGLVPPALEALDRGGVLAVAGI 255

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized [Energy metabolism, Fermentation]. Length = 329

>gnl|CDD|176221 cd08260, Zn_ADH6, Alcohol dehydrogenases of the MDR family

 Score =  118 bits (299), Expect = 1e-30
 Identities = 69/211 (32%), Positives = 96/211 (45%), Gaps = 11/211 (5%)

Query: 33  GAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVG 92
             + V ++V  CG+C +D H  +        P VPGHE  G V EVG +VS ++VGD+V 
Sbjct: 24  PPDGVVVEVEACGVCRSDWHGWQGHDPDVTLPHVPGHEFAGVVVEVGEDVSRWRVGDRVT 83

Query: 93  VGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFV--VKIP 150
           V  ++G C  C  C A     C             G    G FAE + V +  V  V++P
Sbjct: 84  VPFVLG-CGTCPYCRAGDSNVC-------EHQVQPGFTHPGSFAEYVAVPRADVNLVRLP 135

Query: 151 DGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVI 210
           D +    AA L C   T F  L H    + G    + G GGVG   V+IA A+G  V  +
Sbjct: 136 DDVDFVTAAGLGCRFATAFRALVHQARVKPGEWVAVHGCGGVGLSAVMIASALGARVIAV 195

Query: 211 SSSDKKRVEAMEHLGADQYLVSSDATRMQEA 241
              D K +E    LGA   + +S+   +  A
Sbjct: 196 DIDDDK-LELARELGAVATVNASEVEDVAAA 225

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 345

>gnl|CDD|176227 cd08266, Zn_ADH_like1, Alcohol dehydrogenases of the MDR family

 Score =  118 bits (298), Expect = 1e-30
 Identities = 88/333 (26%), Positives = 144/333 (43%), Gaps = 31/333 (9%)

Query: 33  GAEDVYIKVLYCGICHTDIHQIKNDLGMS-NYPMVPGHEVVGEVKEVGSEVSNFKVGDKV 91
           G ++V ++V    + H D+   +   G+    P + G +  G V+ VG  V+N K G +V
Sbjct: 26  GPDEVLVRVKAAALNHLDLWVRRGMPGIKLPLPHILGSDGAGVVEAVGPGVTNVKPGQRV 85

Query: 92  GVGVLVGCCRNCRPCEADVEQYCNK-KIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIP 150
            +   + C R C  C A  E  C +  I         G+   GG+AE + V  + ++ IP
Sbjct: 86  VIYPGISCGR-CEYCLAGRENLCAQYGIL--------GEHVDGGYAEYVAVPARNLLPIP 136

Query: 151 DGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGG----ILGLG-GVGHMGVLIAKAMGH 205
           D ++ E+AA    A +T F    H  + ++ LR G    + G G GVG   + IAK  G 
Sbjct: 137 DNLSFEEAA---AAPLT-FLTAWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGA 192

Query: 206 HVTVISSSDKKRVEAMEHLGADQYLVS------SDATRMQEAADSLDYIIDTVPANHPLE 259
            V   + S+ K   A E LGAD Y++           R       +D +++ V A    E
Sbjct: 193 TVIATAGSEDKLERAKE-LGAD-YVIDYRKEDFVREVRELTGKRGVDVVVEHVGAAT-WE 249

Query: 260 PYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRK-AITGSFIGSMKETKEMLEFCREKGV 318
             L  L   G+L+  G        +    +  R+ +I GS +G+  E  E L       +
Sbjct: 250 KSLKSLARGGRLVTCGATTGYEAPIDLRHVFWRQLSILGSTMGTKAELDEALRLVFRGKL 309

Query: 319 TSMIE-VIKMDYVNKAFERLEKNDVRYRFVVDV 350
             +I+ V  ++   +A  RLE  +   + V+  
Sbjct: 310 KPVIDSVFPLEEAAEAHRRLESREQFGKIVLTP 342

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 342

>gnl|CDD|176201 cd08239, THR_DH_like, L-threonine dehydrogenase (TDH)-like

 Score =  118 bits (297), Expect = 2e-30
 Identities = 81/305 (26%), Positives = 142/305 (46%), Gaps = 27/305 (8%)

Query: 26  TYTLRNTGAEDVYIKVLYCGICHTDIHQI-KNDLGMSNYPMVPGHEVVGEVKEVGSEVSN 84
            + +   G  +V ++V   G+C +D+H         +   ++PGHE  G V  VG  V++
Sbjct: 16  EFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRAPAYQGVIPGHEPAGVVVAVGPGVTH 75

Query: 85  FKVGDKVGVGVLVGC--CRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVD 142
           F+VGD+V V   VGC  CRNCR       Q C  K  +Y      G    GG AE M+V 
Sbjct: 76  FRVGDRVMVYHYVGCGACRNCR---RGWMQLCTSKRAAY------GWNRDGGHAEYMLVP 126

Query: 143 QKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGG----ILGLGGVGHMGVL 198
           +K ++ +PD ++    A LLC   T +       L++ G+ G     ++G G VG   ++
Sbjct: 127 EKTLIPLPDDLSFADGALLLCGIGTAYH-----ALRRVGVSGRDTVLVVGAGPVGLGALM 181

Query: 199 IAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAAD-----SLDYIIDTVP 253
           +A+A+G    +      +R+E  + LGAD ++++S    +QE  +       D  I+   
Sbjct: 182 LARALGAEDVIGVDPSPERLELAKALGAD-FVINSGQDDVQEIRELTSGAGADVAIECSG 240

Query: 254 ANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFC 313
                   L  ++  G+L+L G        ++  ++  ++ + GS+  S+ + +E  EF 
Sbjct: 241 NTAARRLALEAVRPWGRLVLVGEGGELTIEVSNDLIRKQRTLIGSWYFSVPDMEECAEFL 300

Query: 314 REKGV 318
               +
Sbjct: 301 ARHKL 305

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339

>gnl|CDD|176182 cd05279, Zn_ADH1, Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases

 Score =  115 bits (289), Expect = 4e-29
 Identities = 86/368 (23%), Positives = 141/368 (38%), Gaps = 43/368 (11%)

Query: 8   RATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVP 67
           +A + W    P   LS     +    A +V IKV+  G+CHTD+H I   L  +  P++ 
Sbjct: 2   KAAVLWEKGKP---LSIEEIEVAPPKAGEVRIKVVATGVCHTDLHVIDGKL-PTPLPVIL 57

Query: 68  GHEVVGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYND---- 123
           GHE  G V+ +G  V+  K GDKV + +    C  C+ C       C+ K    N     
Sbjct: 58  GHEGAGIVESIGPGVTTLKPGDKV-IPLFGPQCGKCKQCLNPRPNLCS-KSRGTNGRGLM 115

Query: 124 ------VYTDGKPT-----QGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPL 172
                     GKP         FAE  VV +  + KI     LE+   + C     FS  
Sbjct: 116 SDGTSRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKIDPDAPLEKVCLIGCG----FSTG 171

Query: 173 SHFGLKQSGLRGG----ILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQ 228
               +  + +  G    + GLGGVG   ++  KA G    +    +K + E  + LGA +
Sbjct: 172 YGAAVNTAKVTPGSTCAVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQLGATE 231

Query: 229 YLVSSDATRMQEAA------DSLDYIIDTVPANHPLEPYLSLLKLD-GKLILTGV-INTP 280
            +   D  +             +DY  + + +   L+  L   +L  G  ++ GV  +  
Sbjct: 232 CINPRDQDKPIVEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPPSGT 291

Query: 281 MQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCRE------KGVTSMIEVIKMDYVNKAF 334
              L P  +L  + I G+  G  K    + +               +  V+  + +N  F
Sbjct: 292 EATLDPNDLLTGRTIKGTVFGGWKSKDSVPKLVALYRQKKFPLDELITHVLPFEEINDGF 351

Query: 335 ERLEKNDV 342
           + +   + 
Sbjct: 352 DLMRSGES 359

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365

>gnl|CDD|176193 cd08231, MDR_TM0436_like, Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

 Score =  114 bits (288), Expect = 6e-29
 Identities = 74/295 (25%), Positives = 114/295 (38%), Gaps = 22/295 (7%)

Query: 37  VYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVGVL 96
           V ++V   G+C +D+H +         P++ GHE VG V  +G  V+    G+ + VG  
Sbjct: 28  VLVRVRLAGVCGSDVHTVAGRRPRVPLPIILGHEGVGRVVALGGGVTTDVAGEPLKVGDR 87

Query: 97  V-----GCCRNCRPCEADVEQYC-NKKIWSYNDVYTDGKPTQGGFAESMVVDQKF-VVKI 149
           V       C  C  C       C N+K + +     D     GG+AE + +     +V++
Sbjct: 88  VTWSVGAPCGRCYRCLVGDPTKCENRKKYGHEA-SCDDPHLSGGYAEHIYLPPGTAIVRV 146

Query: 150 PDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMG-HHVT 208
           PD +  E AAP  CA  TV + L   G   +G    + G G +G   V  AK  G   V 
Sbjct: 147 PDNVPDEVAAPANCALATVLAALDRAGPVGAGDTVVVQGAGPLGLYAVAAAKLAGARRVI 206

Query: 209 VISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPAN-------HP--LE 259
           VI  S  +R+E     GAD   +  D     +    +  I     A+       HP  + 
Sbjct: 207 VIDGSP-ERLELAREFGADA-TIDIDELPDPQRRAIVRDITGGRGADVVIEASGHPAAVP 264

Query: 260 PYLSLLKLDGKLILTGVIN--TPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEF 312
             L LL+  G  +L G +     +      ++     I G            + F
Sbjct: 265 EGLELLRRGGTYVLVGSVAPAGTVPLDPERIVRKNLTIIGVHNYDPSHLYRAVRF 319

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 361

>gnl|CDD|176181 cd05278, FDH_like, Formaldehyde dehydrogenases

 Score =  112 bits (283), Expect = 2e-28
 Identities = 79/325 (24%), Positives = 137/325 (42%), Gaps = 29/325 (8%)

Query: 32  TGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKV 91
            G  D  ++V    IC +D+H  +  +  + + M+ GHE VGEV EVGS+V   K GD+V
Sbjct: 23  QGPHDAIVRVTATSICGSDLHIYRGGVPGAKHGMILGHEFVGEVVEVGSDVKRLKPGDRV 82

Query: 92  GVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVV---DQKFVVK 148
            V  +  C R CR C      +C   +W     +  G    GG AE + V   D   + K
Sbjct: 83  SVPCITFCGR-CRFCRRGYHAHCENGLWG----WKLGNRIDGGQAEYVRVPYADMN-LAK 136

Query: 149 IPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGG----ILGLGGVGHMGVLIAKAMG 204
           IPDG+  E A  L+ + +    P    G + +G++ G    ++G G VG   V  A+ +G
Sbjct: 137 IPDGLPDEDA--LMLSDIL---PTGFHGAELAGIKPGSTVAVIGAGPVGLCAVAGARLLG 191

Query: 205 HHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSL-----DYIIDTVPANHPLE 259
               +   S+ +R++  +  GA   +   +   +++  +       D +I+ V      E
Sbjct: 192 AARIIAVDSNPERLDLAKEAGATDIINPKNGDIVEQILELTGGRGVDCVIEAVGFEETFE 251

Query: 260 PYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAIT--GSFIGSMKETKEMLEFCREKG 317
             + +++  G +   GV   P   L  +     K +T     +       E+L+   E  
Sbjct: 252 QAVKVVRPGGTIANVGVYGKP-DPLPLLGEWFGKNLTFKTGLVPVRARMPELLDLIEEGK 310

Query: 318 VTSM---IEVIKMDYVNKAFERLEK 339
           +           +D + KA+   + 
Sbjct: 311 IDPSKLITHRFPLDDILKAYRLFDN 335

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 347

>gnl|CDD|176188 cd05285, sorbitol_DH, Sorbitol dehydrogenase

 Score =  109 bits (276), Expect = 2e-27
 Identities = 76/293 (25%), Positives = 128/293 (43%), Gaps = 50/293 (17%)

Query: 33  GAEDVYIKVLYCGICHTDIHQIKNDLGMSNY----PMVPGHEVVGEVKEVGSEVSNFKVG 88
           G  +V ++V   GIC +D+H  K+   + ++    PMV GHE  G V  VGS V++ KVG
Sbjct: 21  GPGEVLVRVRAVGICGSDVHYYKH-GRIGDFVVKEPMVLGHESAGTVVAVGSGVTHLKVG 79

Query: 89  DKVGV--GVLVGCCRNCRPCEADVEQY--C-NKKIWSYNDVYTDGKPTQGGFAESMVVDQ 143
           D+V +  GV    CR C  C++   +Y  C + +  +         P  G     +    
Sbjct: 80  DRVAIEPGV---PCRTCEFCKSG--RYNLCPDMRFAAT-------PPVDGTLCRYVNHPA 127

Query: 144 KFVVKIPDGMALEQAAPLLCAGVTVFSPLS---HFGLKQSGLRGG----ILGLGGVGHMG 196
            F  K+PD ++LE+ A +         PLS   H   +++G+R G    + G G +G + 
Sbjct: 128 DFCHKLPDNVSLEEGALV--------EPLSVGVH-ACRRAGVRPGDTVLVFGAGPIGLLT 178

Query: 197 VLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSD------ATRMQEAADSL--DYI 248
             +AKA G    V++  D  R+E  + LGA   +          A ++ E       D +
Sbjct: 179 AAVAKAFGATKVVVTDIDPSRLEFAKELGATHTVNVRTEDTPESAEKIAELLGGKGPDVV 238

Query: 249 IDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAIT--GSF 299
           I+   A   ++  +   +  G ++L G+    +    P+     + I   G F
Sbjct: 239 IECTGAESCIQTAIYATRPGGTVVLVGMGKPEVTL--PLSAASLREIDIRGVF 289

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 343

>gnl|CDD|176225 cd08264, Zn_ADH_like2, Alcohol dehydrogenases of the MDR family

 Score =  108 bits (272), Expect = 4e-27
 Identities = 90/318 (28%), Positives = 148/318 (46%), Gaps = 32/318 (10%)

Query: 33  GAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVG 92
           G  +V I+V   G+   D + I N + +   P +PG E  G V+EVG  V   K GD+V 
Sbjct: 25  GPGEVLIRVKMAGVNPVDYNVI-NAVKVKPMPHIPGAEFAGVVEEVGDHVKGVKKGDRVV 83

Query: 93  VGVLVGCCRNCRPCEADVEQYC-NKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPD 151
           V   V     C  C +  E  C N  I         G  + GG+AE +VV +K + KIPD
Sbjct: 84  VYNRV-FDGTCDMCLSGNEMLCRNGGII--------GVVSNGGYAEYIVVPEKNLFKIPD 134

Query: 152 GMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGG--ILGLGGVGHMG---VLIAKAMGHH 206
            ++ E AA L  A +T     ++  LK +GL  G  ++  G  G+ G   V +AK MG  
Sbjct: 135 SISDELAASLPVAALT-----AYHALKTAGLGPGETVVVFGASGNTGIFAVQLAKMMGAE 189

Query: 207 VTVISSSDKKRVEAMEHLGADQYLVSSD--ATRMQEAADSLDYIIDTVPANHPLEPYLSL 264
           V  +S  D      ++  GAD  +V  D    +++E     D +I+++  +   +  LS+
Sbjct: 190 VIAVSRKD-----WLKEFGAD-EVVDYDEVEEKVKEITKMADVVINSL-GSSFWDLSLSV 242

Query: 265 LKLDGKLILTGVINTPMQFLTPMVMLGRKA-ITGSFIGSMKETKEMLEFCREKGVTSMIE 323
           L   G+L+  G +      L    +  ++  I GS  G+ KE  E+++  ++  V  + +
Sbjct: 243 LGRGGRLVTFGTLTGGEVKLDLSDLYSKQISIIGSTGGTRKELLELVKIAKDLKV-KVWK 301

Query: 324 VIKMDYVNKAFERLEKND 341
             K++   +A + L   +
Sbjct: 302 TFKLEEAKEALKELFSKE 319

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176203 cd08241, QOR1, Quinone oxidoreductase (QOR)

 Score =  108 bits (273), Expect = 4e-27
 Identities = 65/210 (30%), Positives = 89/210 (42%), Gaps = 58/210 (27%)

Query: 37  VYIKVLYCGICHTDI------HQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGDK 90
           V I+V   G+   D+      +Q+K  L     P VPG EV G V+ VG  V+ FKVGD+
Sbjct: 30  VRIRVEAAGVNFPDLLMIQGKYQVKPPL-----PFVPGSEVAGVVEAVGEGVTGFKVGDR 84

Query: 91  VGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIP 150
           V                                        QGGFAE +VV    V  +P
Sbjct: 85  VVALT-----------------------------------GQGGFAEEVVVPAAAVFPLP 109

Query: 151 DGMALEQAAPLLCAGVTVFSPLSHFGLKQSG-LRGG----ILGL-GGVGHMGVLIAKAMG 204
           DG++ E+AA L     T     ++  L +   L+ G    +LG  GGVG   V +AKA+G
Sbjct: 110 DGLSFEEAAALPVTYGT-----AYHALVRRARLQPGETVLVLGAAGGVGLAAVQLAKALG 164

Query: 205 HHVTVISSSDKKRVEAMEHLGADQYLVSSD 234
             V   +SS++K   A    GAD  +   D
Sbjct: 165 ARVIAAASSEEKLALARAL-GADHVIDYRD 193

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|176211 cd08249, enoyl_reductase_like, enoyl_reductase_like

 Score =  108 bits (272), Expect = 6e-27
 Identities = 75/343 (21%), Positives = 123/343 (35%), Gaps = 61/343 (17%)

Query: 37  VYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVGVL 96
           V +KV    +   D         + +YP + G +  G V EVGS V+ FKVGD+V     
Sbjct: 29  VLVKVKAVALNPVDWKHQDYGF-IPSYPAILGCDFAGTVVEVGSGVTRFKVGDRV----- 82

Query: 97  VGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALE 156
            G      P                        P  G F E +V D     KIPD ++ E
Sbjct: 83  AGFVHGGNP----------------------NDPRNGAFQEYVVADADLTAKIPDNISFE 120

Query: 157 QAAPLLCAGVTVFS--------PLSHFGLKQSGLRGGILGLGG---VGHMGVLIAKAMGH 205
           +AA L    VT           PL       +     +L  GG   VG + + +AK  G+
Sbjct: 121 EAATLPVGLVTAALALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGY 180

Query: 206 HVTVISSSDKKRVEAMEHLGADQ---YLVSSDATRMQEAA-DSLDYIIDTVPANHPLEPY 261
              VI+++  K  + ++ LGAD    Y        ++ A    L Y +D +      +  
Sbjct: 181 K--VITTASPKNFDLVKSLGADAVFDYHDPDVVEDIRAATGGKLRYALDCISTPESAQLC 238

Query: 262 LSLLKLDGKLILTGVINTPMQFLTP------MVMLGRKAITGSFIGSMKETKEMLEFCR- 314
              L   G   L  ++  P +           V+     + G      +  +   ++   
Sbjct: 239 AEALGRSGGGKLVSLLPVPEETEPRKGVKVKFVLGYT--VFGEIPEDREFGEVFWKYLPE 296

Query: 315 --EKG--VTSMIEVIK--MDYVNKAFERLEKNDVR-YRFVVDV 350
             E+G      + V++  ++ V +  + L K  V   + VV +
Sbjct: 297 LLEEGKLKPHPVRVVEGGLEGVQEGLDLLRKGKVSGEKLVVRL 339

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 339

>gnl|CDD|180054 PRK05396, tdh, L-threonine 3-dehydrogenase; Validated

 Score =  108 bits (272), Expect = 7e-27
 Identities = 80/207 (38%), Positives = 97/207 (46%), Gaps = 32/207 (15%)

Query: 33  GAEDVYIKVLYCGICHTDIHQIKND---LGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGD 89
           G  DV IKV    IC TD+H    D         PMV GHE VGEV EVGSEV+ FKVGD
Sbjct: 24  GPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEVTGFKVGD 83

Query: 90  KV-GVGVLV-GCCRNCRPCEADVEQYC-NKKIWSYNDVYTDGKPTQGGFAESMVVDQKFV 146
           +V G G +V G CRNCR   A     C N K    N          G FAE +V+    V
Sbjct: 84  RVSGEGHIVCGHCRNCR---AGRRHLCRNTKGVGVN--------RPGAFAEYLVIPAFNV 132

Query: 147 VKIPDGMALEQAAPLLCAGVTVFSPLS---HFGLKQSGLRGG---ILGLGGVGHMGVLIA 200
            KIPD +  + AA        +F P     H  L    L G    I G G +G M   +A
Sbjct: 133 WKIPDDIPDDLAA--------IFDPFGNAVHTAL-SFDLVGEDVLITGAGPIGIMAAAVA 183

Query: 201 KAMGHHVTVISSSDKKRVEAMEHLGAD 227
           K +G    VI+  ++ R+E    +GA 
Sbjct: 184 KHVGARHVVITDVNEYRLELARKMGAT 210

Length = 341

>gnl|CDD|176180 cd05276, p53_inducible_oxidoreductase, PIG3 p53-inducible quinone oxidoreductase

 Score =  105 bits (264), Expect = 7e-26
 Identities = 80/283 (28%), Positives = 123/283 (43%), Gaps = 63/283 (22%)

Query: 33  GAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPM------VPGHEVVGEVKEVGSEVSNFK 86
           G  +V I+V   G+   D+ Q +       YP       + G EV G V  VG  V+ +K
Sbjct: 26  GPGEVLIRVAAAGVNRADLLQRQG-----LYPPPPGASDILGLEVAGVVVAVGPGVTGWK 80

Query: 87  VGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFV 146
           VGD+V   +L G                                  GG+AE +VV    +
Sbjct: 81  VGDRV-CALLAG----------------------------------GGYAEYVVVPAGQL 105

Query: 147 VKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGG--IL---GLGGVGHMGVLIAK 201
           + +P+G++L +AA L     T +  L   G    GL+ G  +L   G  GVG   + +AK
Sbjct: 106 LPVPEGLSLVEAAALPEVFFTAWQNLFQLG----GLKAGETVLIHGGASGVGTAAIQLAK 161

Query: 202 AMGHHVTVISSSDKKRVEAMEHLGADQ---YLVSSDATRMQEAADS--LDYIIDTVPANH 256
           A+G  V   + S++K +EA   LGAD    Y     A  ++EA     +D I+D V  ++
Sbjct: 162 ALGARVIATAGSEEK-LEACRALGADVAINYRTEDFAEEVKEATGGRGVDVILDMVGGDY 220

Query: 257 PLEPYLSLLKLDGKLILTGVI-NTPMQFLTPMVMLGRKAITGS 298
            L   L  L  DG+L+L G++     +     ++  R  +TGS
Sbjct: 221 -LARNLRALAPDGRLVLIGLLGGAKAELDLAPLLRKRLTLTGS 262

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|176238 cd08277, liver_alcohol_DH_like, Liver alcohol dehydrogenase

 Score =  105 bits (265), Expect = 7e-26
 Identities = 97/374 (25%), Positives = 157/374 (41%), Gaps = 46/374 (12%)

Query: 8   RATIGWAAKDPSGI----LSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNY 63
           +A + W A  P  I    ++P         A +V IK+L   +CHTDI  I+     + +
Sbjct: 4   KAAVAWEAGKPLVIEEIEVAP-------PKANEVRIKMLATSVCHTDILAIEG-FKATLF 55

Query: 64  PMVPGHEVVGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYND 123
           P++ GHE  G V+ VG  V+N K GDKV + + +G C  C  C +     C K   + + 
Sbjct: 56  PVILGHEGAGIVESVGEGVTNLKPGDKV-IPLFIGQCGECSNCRSGKTNLCQKYRANESG 114

Query: 124 VYTD--------GKP-----TQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFS 170
           +  D        GK          F++  VVD+ +V KI     LE    L C   T + 
Sbjct: 115 LMPDGTSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDPAAPLEHVCLLGCGFSTGYG 174

Query: 171 PLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMG-HHVTVISSSDKKRVEAMEHLGADQY 229
              +    + G    + GLG VG   ++ AK  G   +  +  ++ K  +A E  GA  +
Sbjct: 175 AAWNTAKVEPGSTVAVFGLGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKE-FGATDF 233

Query: 230 LVSSDATR-MQEAADSL-----DYIIDTVPANHPL--EPYLSLLKLDGKLILTGVINTPM 281
           +   D+ + + E    +     DY  +    N  L  E   S     G  ++ GV     
Sbjct: 234 INPKDSDKPVSEVIREMTGGGVDYSFECT-GNADLMNEALESTKLGWGVSVVVGVPPGAE 292

Query: 282 QFLTPM-VMLGRKAITGSFIGSMK---ETKEMLEFCREK--GVTSMIE-VIKMDYVNKAF 334
             + P  ++LGR    GSF G  K   +  +++     K   +  +I  V+  + +NK F
Sbjct: 293 LSIRPFQLILGRT-WKGSFFGGFKSRSDVPKLVSKYMNKKFDLDELITHVLPFEEINKGF 351

Query: 335 ERLEKNDVRYRFVV 348
           + L K+    R V+
Sbjct: 352 D-LMKSGECIRTVI 364

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365

>gnl|CDD|176241 cd08281, liver_ADH_like1, Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

 Score =  105 bits (263), Expect = 2e-25
 Identities = 95/367 (25%), Positives = 153/367 (41%), Gaps = 53/367 (14%)

Query: 19  SGILSPY---------TYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGH 69
           +G  +PY            L   G  +V +K+   G+CH+D+  I  D      PM  GH
Sbjct: 9   TGAPTPYADSRPLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVINGDR-PRPLPMALGH 67

Query: 70  EVVGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGK 129
           E  G V EVG  V++ +VGD V V V V  C +CRPC       C     + N     G 
Sbjct: 68  EAAGVVVEVGEGVTDLEVGDHV-VLVFVPSCGHCRPCAEGRPALCEPG-AAAN---GAGT 122

Query: 130 PTQGG------------------FAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSP 171
              GG                  FAE  VV ++ VVKI   + LE AA   CA +T    
Sbjct: 123 LLSGGRRLRLRGGEINHHLGVSAFAEYAVVSRRSVVKIDKDVPLEIAALFGCAVLTGVGA 182

Query: 172 LSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMG-HHVTVISSSDKKRVEAMEHLGADQYL 230
           + +    + G    ++GLGGVG   +L A A G   V  +  ++ K   A E LGA   +
Sbjct: 183 VVNTAGVRPGQSVAVVGLGGVGLSALLGAVAAGASQVVAVDLNEDKLALARE-LGATATV 241

Query: 231 VSSDATRMQEAAD----SLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTP 286
            + D   +++  +     +DY  +   +   LE    + +  G  +  G+ +   +   P
Sbjct: 242 NAGDPNAVEQVRELTGGGVDYAFEMAGSVPALETAYEITRRGGTTVTAGLPDPEARLSVP 301

Query: 287 MVML--GRKAITGSFIGSMKETKEMLEFCR---------EKGVTSMIEVIKMDYVNKAFE 335
            + L    + + GS++GS    +++  +           +K +T     + +D +N+ F+
Sbjct: 302 ALSLVAEERTLKGSYMGSCVPRRDIPRYLALYLSGRLPVDKLLTH---RLPLDEINEGFD 358

Query: 336 RLEKNDV 342
           RL   + 
Sbjct: 359 RLAAGEA 365

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to the corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 371

>gnl|CDD|176244 cd08284, FDH_like_2, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

 Score =  104 bits (261), Expect = 2e-25
 Identities = 76/260 (29%), Positives = 110/260 (42%), Gaps = 24/260 (9%)

Query: 33  GAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVG 92
              D  +KV    IC +D+H  +  +  S    V GHE VGEV EVG EV   KVGD+V 
Sbjct: 24  DPTDAIVKVTAAAICGSDLHIYRGHIP-STPGFVLGHEFVGEVVEVGPEVRTLKVGDRV- 81

Query: 93  VGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPT-QGGFAESMVV---DQKFVVK 148
           V      C  C  C       C K           G P   G  AE + V   D   ++K
Sbjct: 82  VSPFTIACGECFYCRRGQSGRCAKGGL----FGYAGSPNLDGAQAEYVRVPFADGT-LLK 136

Query: 149 IPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGG----ILGLGGVGHMGVLIAKAMG 204
           +PDG++ E A  LL   +    P  +FG K++ +R G    ++G G VG   VL A+ +G
Sbjct: 137 LPDGLSDEAA--LLLGDIL---PTGYFGAKRAQVRPGDTVAVIGCGPVGLCAVLSAQVLG 191

Query: 205 HHVTVISSSDKKRVEAMEHLGADQYLVSSD--ATRMQEAADS--LDYIIDTVPANHPLEP 260
                      +R+E    LGA+           R++EA +    D +++ V     L+ 
Sbjct: 192 AARVFAVDPVPERLERAAALGAEPINFEDAEPVERVREATEGRGADVVLEAVGGAAALDL 251

Query: 261 YLSLLKLDGKLILTGVINTP 280
              L++  G +   GV    
Sbjct: 252 AFDLVRPGGVISSVGVHTAE 271

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 344

>gnl|CDD|188504 TIGR03989, Rxyl_3153, oxidoreductase, Rxyl_3153 family

 Score =  103 bits (258), Expect = 8e-25
 Identities = 78/296 (26%), Positives = 129/296 (43%), Gaps = 30/296 (10%)

Query: 33  GAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVG 92
            A +V +K++  G+CH+D H +  DL M  YP++ GHE  G V +VG  V+  K GD V 
Sbjct: 25  KAGEVLVKLVASGLCHSDEHLVTGDLPMPRYPILGGHEGAGVVTKVGPGVTGVKPGDHVV 84

Query: 93  VGVLVGCCRNCRPCEADVEQYCNK-------KIWS--YNDVYTDGKPTQ-----GGFAES 138
           +  +  C R CR C   ++  C+           S      + DG+        G F+E 
Sbjct: 85  LSFIPACGR-CRWCSTGLQNLCDLGAALLTGSQISDGTYRFHADGQDVGQMCLLGTFSEY 143

Query: 139 MVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVL 198
            VV +  VVKI D + L++A  + C   T +    +    + G    ++G+GGVG   V 
Sbjct: 144 TVVPEASVVKIDDDIPLDKACLVGCGVPTGWGSAVNIADVRPGDTVVVMGIGGVGINAVQ 203

Query: 199 IAKAMG-HHVTVISSSDKKRVEAMEHLGA--------DQYLVSSDATRMQEAADSLDYII 249
            A   G   V  +   + KR +A++  GA        +   +  + T  Q  AD     +
Sbjct: 204 GAAVAGARKVIAVDPVEFKREQALK-FGATHAFASMEEAVQLVRELTNGQ-GADKTIITV 261

Query: 250 DTVPANHPLEPYLSLLKLDGKLILTGVIN-TPMQFLTPMVMLG--RKAITGSFIGS 302
             V   H +   LS  +  G++++TG+     +     +  L   +K + G+  G 
Sbjct: 262 GEVDGEH-IAEALSATRKGGRVVVTGLGPMADVDVKVNLFELTLLQKELQGTLFGG 316

This model describes a clade within the family pfam00107 of zinc-binding dehydrogenases. The family pfam00107 contains class III alcohol dehydrogenases, including enzymes designated S-(hydroxymethyl)glutathione dehydrogenase and NAD/mycothiol-dependent formaldehyde dehydrogenase. Members of the current family occur only in species that contain the very small protein mycofactocin (TIGR03969), a possible cofactor precursor, and radical SAM protein TIGR03962. We name this family for Rxyl_3153, where the lone member of the family co-clusters with these markers in Rubrobacter xylanophilus [Unknown function, Enzymes of unknown specificity]. Length = 369

>gnl|CDD|176222 cd08261, Zn_ADH7, Alcohol dehydrogenases of the MDR family

 Score =  102 bits (257), Expect = 8e-25
 Identities = 86/274 (31%), Positives = 125/274 (45%), Gaps = 47/274 (17%)

Query: 33  GAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVG 92
           GA +V ++V   GIC +D+H        ++YP + GHE+ GEV EVG  V+  KVGD+V 
Sbjct: 23  GAGEVLVRVKRVGICGSDLHIYHGRNPFASYPRILGHELSGEVVEVGEGVAGLKVGDRV- 81

Query: 93  VGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDG 152
           V      C  C  C       C         V   G    GGFAE +VV     + +P+G
Sbjct: 82  VVDPYISCGECYACRKGRPNCCEN-----LQVL--GVHRDGGFAEYIVVPAD-ALLVPEG 133

Query: 153 MALEQAA---PL-----------LCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVL 198
           ++L+QAA   PL           + AG TV                 ++G G +G +GV+
Sbjct: 134 LSLDQAALVEPLAIGAHAVRRAGVTAGDTVL----------------VVGAGPIG-LGVI 176

Query: 199 I-AKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSD---ATRMQEAADS--LDYIIDTV 252
             AKA G  V V+   D +R+E    LGAD  +   D   A R++E  D    D +ID  
Sbjct: 177 QVAKARGARVIVVDIDD-ERLEFARELGADDTINVGDEDVAARLRELTDGEGADVVIDAT 235

Query: 253 PANHPLEPYLSLLKLDGKLILTGVINTPMQFLTP 286
                +E  + L+   G+++L G+   P+ F  P
Sbjct: 236 GNPASMEEAVELVAHGGRVVLVGLSKGPVTFPDP 269

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176237 cd08276, MDR7, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  102 bits (256), Expect = 1e-24
 Identities = 80/293 (27%), Positives = 129/293 (44%), Gaps = 44/293 (15%)

Query: 64  PMVPGHEVVGEVKEVGSEVSNFKVGDKV----GVGVLVGCCRNCRPCEADVEQYCNKKIW 119
           P++P  +  GEV  VG  V+ FKVGD+V        L G      P   D          
Sbjct: 58  PLIPLSDGAGEVVAVGEGVTRFKVGDRVVPTFFPNWLDG-----PPTAEDEAS------- 105

Query: 120 SYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQ 179
                   G P  G  AE +V+ ++ +V+ PD ++ E+AA L CAG+T ++ L  FGL  
Sbjct: 106 ------ALGGPIDGVLAEYVVLPEEGLVRAPDHLSFEEAATLPCAGLTAWNAL--FGLGP 157

Query: 180 SGLRGG----ILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDA 235
             L+ G    + G GGV    +  AKA G  V   SSSD+K  E  + LGAD ++++   
Sbjct: 158 --LKPGDTVLVQGTGGVSLFALQFAKAAGARVIATSSSDEKL-ERAKALGAD-HVINYRT 213

Query: 236 TRMQ-EAADSL------DYIIDTV-PANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPM 287
           T    E    L      D++++   P    L   +  +   G + L G ++     +  +
Sbjct: 214 TPDWGEEVLKLTGGRGVDHVVEVGGPGT--LAQSIKAVAPGGVISLIGFLSGFEAPVLLL 271

Query: 288 VMLGRKA-ITGSFIGSMKETKEMLEFCREKGVTSMIE-VIKMDYVNKAFERLE 338
            +L + A + G  +GS  + + M        +  +I+ V   +   +A+  LE
Sbjct: 272 PLLTKGATLRGIAVGSRAQFEAMNRAIEAHRIRPVIDRVFPFEEAKEAYRYLE 324

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 336

>gnl|CDD|176239 cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydrogenase

 Score = 98.7 bits (247), Expect = 3e-23
 Identities = 81/280 (28%), Positives = 112/280 (40%), Gaps = 45/280 (16%)

Query: 28  TLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKV 87
            L +   ++V ++++  GICHTD+      L     P V GHE  G V+ VGS V+  K 
Sbjct: 21  ELDDPRPDEVLVRIVATGICHTDLVVRDGGLPTP-LPAVLGHEGAGVVEAVGSAVTGLKP 79

Query: 88  GDKVGVGVLVGC-CRNCRPCEADVEQYCNKKIWSYND--VYTDGKPT------------- 131
           GD V   VL    C  C  C +    YC    +  N      DG                
Sbjct: 80  GDHV---VLSFASCGECANCLSGHPAYCE-NFFPLNFSGRRPDGSTPLSLDDGTPVHGHF 135

Query: 132 --QGGFAESMVVDQKFVVKIPDGMALEQAAPLLC-----AGVTVFSPLSHFGLKQSGLRG 184
             Q  FA   VV ++ VVK+   + LE  APL C     AG  V + L      + G   
Sbjct: 136 FGQSSFATYAVVHERNVVKVDKDVPLELLAPLGCGIQTGAG-AVLNVLK----PRPGSSI 190

Query: 185 GILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEA-- 241
            + G G VG   V+ AK  G   +  +   D +   A E LGA   +++     +  A  
Sbjct: 191 AVFGAGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAKE-LGATH-VINPKEEDLVAAIR 248

Query: 242 ---ADSLDYIIDT--VPANHPLEPYLSLLKLDGKLILTGV 276
                 +DY +DT  VPA   +E  +  L   G L L G 
Sbjct: 249 EITGGGVDYALDTTGVPAV--IEQAVDALAPRGTLALVGA 286

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 365

>gnl|CDD|176232 cd08271, MDR5, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 95.0 bits (237), Expect = 4e-22
 Identities = 79/283 (27%), Positives = 115/283 (40%), Gaps = 54/283 (19%)

Query: 12  GWAAKDPSGILSPYTYTLRNT---GAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPG 68
            W    P   L   T         GA +V +KV   G+   D   I       +YP VPG
Sbjct: 3   AWVLPKPGAALQ-LTLEEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPAWSYPHVPG 61

Query: 69  HEVVGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDG 128
            +  G V  VG++V+ +KVGD+V                                 Y   
Sbjct: 62  VDGAGVVVAVGAKVTGWKVGDRV--------------------------------AYHAS 89

Query: 129 KPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGG--I 186
               G FAE  VVD + V+ +PD ++ E+AA L CAG+T +  L     K+  +  G  I
Sbjct: 90  LARGGSFAEYTVVDARAVLPLPDSLSFEEAAALPCAGLTAYQAL----FKKLRIEAGRTI 145

Query: 187 L---GLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGAD---QYLVSSDATRMQE 240
           L   G GGVG   V +AK  G  + VI++  K+  E ++ LGAD    Y       R++E
Sbjct: 146 LITGGAGGVGSFAVQLAKRAG--LRVITTCSKRNFEYVKSLGADHVIDYNDEDVCERIKE 203

Query: 241 AADS--LDYIIDTVPANHPLEPYLSLLKLDGKLI-LTGVINTP 280
                 +D ++DTV            L  +G L+ + G  +  
Sbjct: 204 ITGGRGVDAVLDTVGGETA-AALAPTLAFNGHLVCIQGRPDAS 245

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 325

>gnl|CDD|129775 TIGR00692, tdh, L-threonine 3-dehydrogenase

 Score = 93.8 bits (233), Expect = 1e-21
 Identities = 69/203 (33%), Positives = 93/203 (45%), Gaps = 24/203 (11%)

Query: 33  GAEDVYIKVLYCGICHTDIHQIKNDLGMSNY---PMVPGHEVVGEVKEVGSEVSNFKVGD 89
           G  +V IKVL   IC TD+H    D    +    P V GHEV GEV  +G  V   KVGD
Sbjct: 22  GPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKVGD 81

Query: 90  KVGVGVLVGC--CRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVV 147
            V V   + C  C  CR  +  V Q  N KI+  +        T G FAE  VV  + + 
Sbjct: 82  YVSVETHIVCGKCYACRRGQYHVCQ--NTKIFGVD--------TDGCFAEYAVVPAQNIW 131

Query: 148 KIPDGMALEQAA---PLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMG 204
           K P  +  E A    PL  A  TV +         SG    + G G +G M + +AKA G
Sbjct: 132 KNPKSIPPEYATIQEPLGNAVHTVLA------GPISGKSVLVTGAGPIGLMAIAVAKASG 185

Query: 205 HHVTVISSSDKKRVEAMEHLGAD 227
            +  ++S  ++ R+E  + +GA 
Sbjct: 186 AYPVIVSDPNEYRLELAKKMGAT 208

This protein is a tetrameric, zinc-binding, NAD-dependent enzyme of threonine catabolism. Closely related proteins include sorbitol dehydrogenase, xylitol dehydrogenase, and benzyl alcohol dehydrogenase. Eukaryotic examples of this enzyme have been demonstrated experimentally but do not appear in database search results.E. coli His-90 modulates substrate specificity and is believed part of the active site [Energy metabolism, Amino acids and amines]. Length = 340

>gnl|CDD|234027 TIGR02824, quinone_pig3, putative NAD(P)H quinone oxidoreductase, PIG3 family

 Score = 93.1 bits (232), Expect = 2e-21
 Identities = 78/281 (27%), Positives = 118/281 (41%), Gaps = 59/281 (20%)

Query: 33  GAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPM------VPGHEVVGEVKEVGSEVSNFK 86
            A +V I+V   G+   D+ Q         YP       + G EV GEV  VG  VS +K
Sbjct: 26  KAGEVLIRVAAAGVNRPDLLQ-----RAGKYPPPPGASDILGLEVAGEVVAVGEGVSRWK 80

Query: 87  VGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFV 146
           VGD+V   ++ G                                  GG+AE + V    V
Sbjct: 81  VGDRV-CALVAG----------------------------------GGYAEYVAVPAGQV 105

Query: 147 VKIPDGMALEQAAPLLCAGVTVFSPL-SHFGLK--QSGLRGGILGLGGVGHMGVLIAKAM 203
           + +P+G++L +AA L     TV+S L    GLK  ++ L  G  G  G+G   + +AKA 
Sbjct: 106 LPVPEGLSLVEAAALPETFFTVWSNLFQRGGLKAGETVLIHG--GASGIGTTAIQLAKAF 163

Query: 204 GHHVTVISSSDKKRVEAMEHLGADQYLVSSD-----ATRMQEAADSLDYIIDTVPANHPL 258
           G  V   + SD+K   A E LGAD  +   +       + +     +D I+D V  ++ L
Sbjct: 164 GARVFTTAGSDEK-CAACEALGADIAINYREEDFVEVVKAETGGKGVDVILDIVGGSY-L 221

Query: 259 EPYLSLLKLDGKLILTGVIN-TPMQFLTPMVMLGRKAITGS 298
              +  L LDG+++  G       +     ++  R  ITGS
Sbjct: 222 NRNIKALALDGRIVQIGFQGGRKAELDLGPLLAKRLTITGS 262

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized [Unknown function, Enzymes of unknown specificity]. Length = 325

>gnl|CDD|215721 pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase

 Score = 88.5 bits (220), Expect = 2e-21
 Identities = 39/128 (30%), Positives = 62/128 (48%), Gaps = 6/128 (4%)

Query: 191 GVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSD---ATRMQEAADSL-- 245
           GVG   V +AKA+G    +     ++++E  + LGAD  +   D     R++E       
Sbjct: 1   GVGLAAVQLAKALGAARVIAVDRSEEKLELAKELGADHVINYRDEDFVERVRELTGGRGV 60

Query: 246 DYIIDTVPANHPLEPYLSLLKLDGKLILTGVI-NTPMQFLTPMVMLGRKAITGSFIGSMK 304
           D +ID V A   LE  L LL+  G++++ G+    P+ F    ++L    I GS  G  +
Sbjct: 61  DVVIDCVGAPATLEQALELLRPGGRVVVVGLPGGAPVPFPLRDLLLKELTILGSLGGGRE 120

Query: 305 ETKEMLEF 312
           E +E LE 
Sbjct: 121 EFEEALEL 128

Length = 131

>gnl|CDD|176184 cd05281, TDH, Threonine dehydrogenase

 Score = 91.9 bits (229), Expect = 7e-21
 Identities = 69/206 (33%), Positives = 95/206 (46%), Gaps = 30/206 (14%)

Query: 33  GAEDVYIKVLYCGICHTDIHQIK-NDLGMS--NYPMVPGHEVVGEVKEVGSEVSNFKVGD 89
           G  +V IKVL   IC TD+H  + ++   S    P++ GHE  GEV EVG  V+  KVGD
Sbjct: 24  GPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEVGEGVTRVKVGD 83

Query: 90  KVGVGVLVGC--CRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVV 147
            V     + C  C  CR     V Q  N KI         G  T G FAE +VV ++ + 
Sbjct: 84  YVSAETHIVCGKCYQCRTGNYHVCQ--NTKIL--------GVDTDGCFAEYVVVPEENLW 133

Query: 148 KIPDGMALEQAA---PLLCAGVTVFSPLSHFGLKQSGLRGG---ILGLGGVGHMGVLIAK 201
           K    +  E A+   PL  A  TV +           + G    I G G +G M + +AK
Sbjct: 134 KNDKDIPPEIASIQEPLGNAVHTVLA---------GDVSGKSVLITGCGPIGLMAIAVAK 184

Query: 202 AMGHHVTVISSSDKKRVEAMEHLGAD 227
           A G  + + S  +  R+E  + +GAD
Sbjct: 185 AAGASLVIASDPNPYRLELAKKMGAD 210

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 341

>gnl|CDD|176194 cd08232, idonate-5-DH, L-idonate 5-dehydrogenase

 Score = 91.1 bits (227), Expect = 1e-20
 Identities = 79/290 (27%), Positives = 122/290 (42%), Gaps = 46/290 (15%)

Query: 33  GAEDVYIKVLYCGICHTDIHQIKNDLGMSNY----PMVPGHEVVGEVKEVGSEVSNFKVG 88
           G  +V ++V   GIC +D+H      G        PMV GHEV G V+ VG  V+    G
Sbjct: 20  GPGEVRVRVAAGGICGSDLHYY-QHGGFGTVRLREPMVLGHEVSGVVEAVGPGVTGLAPG 78

Query: 89  DKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGK----P-TQGGFAESMVVDQ 143
            +V V     C   C  C A     C        ++   G     P  QGGF E +VVD 
Sbjct: 79  QRVAVNPSRPCGT-CDYCRAGRPNLC-------LNMRFLGSAMRFPHVQGGFREYLVVDA 130

Query: 144 KFVVKIPDGMALEQAAPLLCAGVTVFSPLS---HFGLKQSG-LRGG---ILGLGGVGHMG 196
              V +PDG++L +AA    A      PL+   H  + ++G L G    + G G +G + 
Sbjct: 131 SQCVPLPDGLSLRRAA---LA-----EPLAVALH-AVNRAGDLAGKRVLVTGAGPIGALV 181

Query: 197 VLIAKAMG-HHVTV--ISSSDKKRVEAMEHLGADQYL-VSSDATRMQEAADS-LDYIIDT 251
           V  A+  G   +    ++ +      AM   GAD+ + ++ D      A     D + + 
Sbjct: 182 VAAARRAGAAEIVATDLADAPLAVARAM---GADETVNLARDPLAAYAADKGDFDVVFEA 238

Query: 252 VPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAIT--GSF 299
             A   L   L +++  G ++  G++  P+    P+  L  K +   GSF
Sbjct: 239 SGAPAALASALRVVRPGGTVVQVGMLGGPVPL--PLNALVAKELDLRGSF 286

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339

>gnl|CDD|176179 cd05195, enoyl_red, enoyl reductase of polyketide synthase

 Score = 89.6 bits (223), Expect = 2e-20
 Identities = 55/201 (27%), Positives = 81/201 (40%), Gaps = 43/201 (21%)

Query: 36  DVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVGV 95
           +V ++V   G+   D+      L     P+  G E  G V  VGS V+  KVGD+V +G+
Sbjct: 2   EVEVEVKAAGLNFRDVLVALGLLPGDETPL--GLECSGIVTRVGSGVTGLKVGDRV-MGL 58

Query: 96  LVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMAL 155
                                                G FA  + VD + VVKIPD ++ 
Sbjct: 59  -----------------------------------APGAFATHVRVDARLVVKIPDSLSF 83

Query: 156 EQAAPLLCAGVTVFSPLSHFGLKQSGLRGGIL---GLGGVGHMGVLIAKAMGHHVTVISS 212
           E+AA L  A +T +  L      Q G    +L     GGVG   + +A+ +G  V     
Sbjct: 84  EEAATLPVAYLTAYYALVDLARLQKGES--VLIHAAAGGVGQAAIQLAQHLGAEVFATVG 141

Query: 213 SDKKRVEAMEHLGADQYLVSS 233
           S++KR    E  G   ++ SS
Sbjct: 142 SEEKREFLRELGGPVDHIFSS 162

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 293

>gnl|CDD|178341 PLN02740, PLN02740, Alcohol dehydrogenase-like

 Score = 90.6 bits (225), Expect = 3e-20
 Identities = 101/370 (27%), Positives = 155/370 (41%), Gaps = 36/370 (9%)

Query: 1   MGSLDTERATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGM 60
            G + T +A + W   +P   L      +      +V IK+LY  ICHTD+   K +   
Sbjct: 5   QGKVITCKAAVAWGPGEP---LVMEEIRVDPPQKMEVRIKILYTSICHTDLSAWKGENEA 61

Query: 61  SN-YPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNK--- 116
              YP + GHE  G V+ VG  V + K GD V + +  G C +CR C+ D    C     
Sbjct: 62  QRAYPRILGHEAAGIVESVGEGVEDLKAGDHV-IPIFNGECGDCRYCKRDKTNLCETYRV 120

Query: 117 ---KIWSYND------VYTDGKP-----TQGGFAESMVVDQKFVVKIPDGMALEQAAPLL 162
              K    ND         DG+P         F E  V+D   VVKI     L++ + L 
Sbjct: 121 DPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDSACVVKIDPNAPLKKMSLLS 180

Query: 163 CAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAME 222
           C   T      +    Q+G    I GLG VG      A+A G    +    + ++ E  +
Sbjct: 181 CGVSTGVGAAWNTANVQAGSSVAIFGLGAVGLAVAEGARARGASKIIGVDINPEKFEKGK 240

Query: 223 HLGADQYLVSSDAT-----RMQEAAD-SLDYIIDTVPANHPL-EPYLSLLKLDGKLILTG 275
            +G   ++   D+      R++E     +DY  +       L E +LS     G  +L G
Sbjct: 241 EMGITDFINPKDSDKPVHERIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLG 300

Query: 276 VINTP-MQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCRE--KGVTSMIEVIK----MD 328
           +  TP M  L PM +   ++ITGS  G  K   ++    ++  +GV ++   I      +
Sbjct: 301 IHPTPKMLPLHPMELFDGRSITGSVFGDFKGKSQLPNLAKQCMQGVVNLDGFITHELPFE 360

Query: 329 YVNKAFERLE 338
            +N+AF+ LE
Sbjct: 361 KINEAFQLLE 370

Length = 381

>gnl|CDD|176245 cd08285, NADP_ADH, NADP(H)-dependent alcohol dehydrogenases

 Score = 89.6 bits (223), Expect = 4e-20
 Identities = 55/205 (26%), Positives = 80/205 (39%), Gaps = 18/205 (8%)

Query: 33  GAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVG 92
           G  D  ++      C +D+H +        + M+ GHE VG V+EVGSEV +FK GD+  
Sbjct: 23  GPNDAIVRPTAVAPCTSDVHTVWGGAPGERHGMILGHEAVGVVEEVGSEVKDFKPGDR-- 80

Query: 93  VGVLVGC---CRNCRPCEADVEQYCNKKI--WSYNDVYTDGKPTQGGFAESMVVD--QKF 145
             V+V            +          +  W +           G FAE   V+     
Sbjct: 81  --VIVPAITPDWRSVAAQRGYPSQSGGMLGGWKF------SNFKDGVFAEYFHVNDADAN 132

Query: 146 VVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH 205
           +  +PDG+  EQA  L     T F       +K  G    + G+G VG M V  A+  G 
Sbjct: 133 LAPLPDGLTDEQAVMLPDMMSTGFHGAELANIK-LGDTVAVFGIGPVGLMAVAGARLRGA 191

Query: 206 HVTVISSSDKKRVEAMEHLGADQYL 230
              +   S   RVE  +  GA   +
Sbjct: 192 GRIIAVGSRPNRVELAKEYGATDIV 216

This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 351

>gnl|CDD|176259 cd08299, alcohol_DH_class_I_II_IV, class I, II, IV alcohol dehydrogenases

 Score = 88.9 bits (221), Expect = 9e-20
 Identities = 62/211 (29%), Positives = 88/211 (41%), Gaps = 19/211 (9%)

Query: 8   RATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVP 67
           +A + W  K P    S     +    A +V IK++  GIC +D H +   L    +P++ 
Sbjct: 9   KAAVLWEPKKP---FSIEEIEVAPPKAHEVRIKIVATGICRSDDHVVSGKLVT-PFPVIL 64

Query: 68  GHEVVGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNK-KIWSYNDVYT 126
           GHE  G V+ VG  V+  K GDKV + + V  C  CR C       C K  +     +  
Sbjct: 65  GHEAAGIVESVGEGVTTVKPGDKV-IPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLMQ 123

Query: 127 D--------GKPTQ-----GGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLS 173
           D        GKP         F+E  VVD+  V KI     LE+   + C   T +    
Sbjct: 124 DGTSRFTCKGKPIHHFLGTSTFSEYTVVDEIAVAKIDAAAPLEKVCLIGCGFSTGYGAAV 183

Query: 174 HFGLKQSGLRGGILGLGGVGHMGVLIAKAMG 204
           +      G    + GLGGVG   ++  KA G
Sbjct: 184 NTAKVTPGSTCAVFGLGGVGLSAIMGCKAAG 214

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 373

>gnl|CDD|182371 PRK10309, PRK10309, galactitol-1-phosphate dehydrogenase; Provisional

 Score = 88.0 bits (218), Expect = 2e-19
 Identities = 71/219 (32%), Positives = 101/219 (46%), Gaps = 21/219 (9%)

Query: 35  EDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVG 94
           +DV +KV   G+C +DI +I  + G   YP+  GHE  G V+ VGS V +   GD V   
Sbjct: 26  DDVLVKVASSGLCGSDIPRIFKN-GAHYYPITLGHEFSGYVEAVGSGVDDLHPGDAVACV 84

Query: 95  VLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMA 154
            L+ C   C  C       C K    Y+ +   G    GG AE +VV +K +  +P  M 
Sbjct: 85  PLLPCFT-CPECLRGFYSLCAK----YDFI---GSRRDGGNAEYIVVKRKNLFALPTDMP 136

Query: 155 LEQAAPLLCAGVTVFSPLSHFGLKQSGLRGG---ILGLGGVGHMGVLIAKAMG-HHVTVI 210
           +E  A      +TV   L  F L Q G  G    I+G G +G + +  A A+G   VT I
Sbjct: 137 IEDGA--FIEPITV--GLHAFHLAQ-GCEGKNVIIIGAGTIGLLAIQCAVALGAKSVTAI 191

Query: 211 SSSDKKRVEAMEHLGADQYLVSSD--ATRMQEAADSLDY 247
             + +K   A + LGA Q   S +  A ++Q     L +
Sbjct: 192 DINSEKLALA-KSLGAMQTFNSREMSAPQIQSVLRELRF 229

Length = 347

>gnl|CDD|215378 PLN02702, PLN02702, L-idonate 5-dehydrogenase

 Score = 87.9 bits (218), Expect = 2e-19
 Identities = 79/282 (28%), Positives = 130/282 (46%), Gaps = 40/282 (14%)

Query: 27  YTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNY----PMVPGHEVVGEVKEVGSEV 82
           + L   G  DV +++   GIC +D+H +K  +  +++    PMV GHE  G ++EVGSEV
Sbjct: 34  FKLPPLGPHDVRVRMKAVGICGSDVHYLKT-MRCADFVVKEPMVIGHECAGIIEEVGSEV 92

Query: 83  SNFKVGDKVGVGVLVGCCRNCRPCEADVEQYC-NKKIWSYNDVYTDGKPTQGGFAESMVV 141
            +  VGD+V +   + C R C  C+      C   K ++         P  G  A  +V 
Sbjct: 93  KHLVVGDRVALEPGISCWR-CNLCKEGRYNLCPEMKFFA-------TPPVHGSLANQVVH 144

Query: 142 DQKFVVKIPDGMALEQAAPLLCAGVTVFSPLS---HFGLKQSGL----RGGILGLGGVGH 194
                 K+P+ ++LE+ A  +C       PLS   H   +++ +       ++G G +G 
Sbjct: 145 PADLCFKLPENVSLEEGA--MC------EPLSVGVH-ACRRANIGPETNVLVMGAGPIGL 195

Query: 195 MGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYL--------VSSDATRMQEAADS-L 245
           + +L A+A G    VI   D +R+   + LGAD+ +        V S+   +Q+A    +
Sbjct: 196 VTMLAARAFGAPRIVIVDVDDERLSVAKQLGADEIVLVSTNIEDVESEVEEIQKAMGGGI 255

Query: 246 DYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQF-LTP 286
           D   D V  N  +   L   +  GK+ L G+ +  M   LTP
Sbjct: 256 DVSFDCVGFNKTMSTALEATRAGGKVCLVGMGHNEMTVPLTP 297

Length = 364

>gnl|CDD|176210 cd08248, RTN4I1, Human Reticulon 4 Interacting Protein 1

 Score = 87.7 bits (218), Expect = 2e-19
 Identities = 82/332 (24%), Positives = 130/332 (39%), Gaps = 69/332 (20%)

Query: 48  HTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCE 107
           +              +P+  G +  G V ++GS V +F++GD+V   V            
Sbjct: 58  NKKRKPQSCKYSGIEFPLTLGRDCSGVVVDIGSGVKSFEIGDEVWGAVPP---------- 107

Query: 108 ADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVT 167
                      WS           QG  AE +VV +  V K P  ++ E+AA L  AG+T
Sbjct: 108 -----------WS-----------QGTHAEYVVVPENEVSKKPKNLSHEEAASLPYAGLT 145

Query: 168 VFSPL-SHFGLKQSGLRGG-IL---GLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAME 222
            +S L +  GL      G  +L   G GGVG   + + KA G HVT   S+D   +  ++
Sbjct: 146 AWSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCSTDA--IPLVK 203

Query: 223 HLGADQYL--VSSDATRMQEAADSLDYIIDTV-PANHPLEPYLSLLKLDGKLILTG---V 276
            LGAD  +   + D           D I+DTV       +  L LLK  G  +      +
Sbjct: 204 SLGADDVIDYNNEDFEEELTERGKFDVILDTVGGDTE--KWALKLLKKGGTYVTLVSPLL 261

Query: 277 INT-----PMQFLTPMVMLGRKAITGSFIGS-------------MKETKEMLEFCREKGV 318
            NT         L   V L +K +     GS             + E  +++E   +  +
Sbjct: 262 KNTDKLGLVGGMLKSAVDLLKKNVKSLLKGSHYRWGFFSPSGSALDELAKLVE---DGKI 318

Query: 319 TSMIE-VIKMDYVNKAFERLEKNDVRYRFVVD 349
             +I+ V   + V +A+E++E    R + V+ 
Sbjct: 319 KPVIDKVFPFEEVPEAYEKVESGHARGKTVIK 350

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 350

>gnl|CDD|214840 smart00829, PKS_ER, Enoylreductase

 Score = 86.3 bits (215), Expect = 3e-19
 Identities = 52/194 (26%), Positives = 75/194 (38%), Gaps = 53/194 (27%)

Query: 39  IKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVGVLVG 98
           I+V   G+   D+      LG+     V G E  G V  VG  V+   VGD+V +G+   
Sbjct: 1   IEVRAAGLNFRDVL---IALGLYPGEAVLGGECAGVVTRVGPGVTGLAVGDRV-MGL--- 53

Query: 99  CCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQA 158
                                             G FA  +V D + VV IPDG + E+A
Sbjct: 54  --------------------------------APGAFATRVVTDARLVVPIPDGWSFEEA 81

Query: 159 APLLCAGVTVFSPLSHFGLKQSGLRGG--IL---GLGGVGHMGVLIAKAMGHHV--TVIS 211
           A +    +T +  L         LR G  +L     GGVG   + +A+ +G  V  T   
Sbjct: 82  ATVPVVFLTAYYALVDLA----RLRPGESVLIHAAAGGVGQAAIQLARHLGAEVFATA-- 135

Query: 212 SSDKKRVEAMEHLG 225
            S +KR + +  LG
Sbjct: 136 GSPEKR-DFLRALG 148

Enoylreductase in Polyketide synthases. Length = 287

>gnl|CDD|176189 cd05286, QOR2, Quinone oxidoreductase (QOR)

 Score = 86.0 bits (214), Expect = 5e-19
 Identities = 61/211 (28%), Positives = 89/211 (42%), Gaps = 52/211 (24%)

Query: 33  GAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVG 92
           G  +V ++    G+   D +  ++ L     P V G E  G V+ VG  V+ FKVGD+V 
Sbjct: 25  GPGEVLVRNTAIGVNFIDTYF-RSGLYPLPLPFVLGVEGAGVVEAVGPGVTGFKVGDRVA 83

Query: 93  VGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDG 152
                               Y                   G +AE  VV    +VK+PDG
Sbjct: 84  --------------------YAG---------------PPGAYAEYRVVPASRLVKLPDG 108

Query: 153 MALEQAAPLLCAGVTVFSPLSHFGLKQSG-LRGG--IL---GLGGVGHMGVLIAKAMGHH 206
           ++ E AA LL  G+T      H+ L+++  ++ G  +L     GGVG +    AKA+G  
Sbjct: 109 ISDETAAALLLQGLTA-----HYLLRETYPVKPGDTVLVHAAAGGVGLLLTQWAKALGAT 163

Query: 207 V--TVISSSDKKRVEAMEHLGADQYLVSSDA 235
           V  TV  SS++K   A    GAD  +   D 
Sbjct: 164 VIGTV--SSEEKAELARAA-GADHVINYRDE 191

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone and 1,4-naphthoquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 320

>gnl|CDD|132492 TIGR03451, mycoS_dep_FDH, S-(hydroxymethyl)mycothiol dehydrogenase

 Score = 86.0 bits (213), Expect = 8e-19
 Identities = 95/340 (27%), Positives = 141/340 (41%), Gaps = 32/340 (9%)

Query: 33  GAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVG 92
           G  +V + +  CG+CHTD+H  +  +    +P + GHE  G V+ VG  V++   GD V 
Sbjct: 25  GPGEVIVDIQACGVCHTDLHYREGGIN-DEFPFLLGHEAAGVVEAVGEGVTDVAPGDYV- 82

Query: 93  VGVLVGCCRNCRPCEADVEQYC-NKKIWSYNDVYTDGKPTQ-----GGFAESMVVDQKFV 146
           V      C  CR C+     YC +    +     TDG         G FAE  +V     
Sbjct: 83  VLNWRAVCGQCRACKRGRPWYCFDTHNATQKMTLTDGTELSPALGIGAFAEKTLVHAGQC 142

Query: 147 VKIPDGMALEQAAPLLCAGVTV-FSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH 205
            K+ D  A   AA LL  GV        + G  + G    ++G GGVG   +  A   G 
Sbjct: 143 TKV-DPAADPAAAGLLGCGVMAGLGAAVNTGGVKRGDSVAVIGCGGVGDAAIAGAALAGA 201

Query: 206 HVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSL------DYIIDTVPANHPLE 259
              +    D +++E     GA  + V+S  T   EA  +L      D +ID V      +
Sbjct: 202 SKIIAVDIDDRKLEWAREFGA-THTVNSSGTDPVEAIRALTGGFGADVVIDAVGRPETYK 260

Query: 260 PYLSLLKLDGKLILTGVINTPMQFLTPMV-MLGR-KAITGSFIGSMKETKE--ML----- 310
                  L G ++L GV    M    P++ + GR  A+  S+ G     ++  ML     
Sbjct: 261 QAFYARDLAGTVVLVGVPTPDMTLELPLLDVFGRGGALKSSWYGDCLPERDFPMLVDLYL 320

Query: 311 --EFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVV 348
                 +  VT   E I +D V +AF+++   DV  R VV
Sbjct: 321 QGRLPLDAFVT---ERIGLDDVEEAFDKMHAGDV-LRSVV 356

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione [Cellular processes, Detoxification]. Length = 358

>gnl|CDD|176246 cd08286, FDH_like_ADH2, formaldehyde dehydrogenase (FDH)-like

 Score = 85.4 bits (212), Expect = 1e-18
 Identities = 63/211 (29%), Positives = 97/211 (45%), Gaps = 11/211 (5%)

Query: 36  DVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVGV 95
           D  +K+L   IC TD+H +K D+       + GHE VG V+EVGS V+NFKVGD+    V
Sbjct: 27  DAIVKMLKTTICGTDLHILKGDVPTVTPGRILGHEGVGVVEEVGSAVTNFKVGDR----V 82

Query: 96  LVGC---CRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDG 152
           L+ C   C  C  C   +  +C    W   ++  DG  TQ  +      D   + K+P+G
Sbjct: 83  LISCISSCGTCGYCRKGLYSHCESGGWILGNL-IDG--TQAEYVRIPHADNS-LYKLPEG 138

Query: 153 MALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISS 212
           +  E A  L     T +      G  + G    I+G G VG   +L A+       ++  
Sbjct: 139 VDEEAAVMLSDILPTGYECGVLNGKVKPGDTVAIVGAGPVGLAALLTAQLYSPSKIIMVD 198

Query: 213 SDKKRVEAMEHLGADQYLVSSDATRMQEAAD 243
            D  R+E  + LGA   + S+    +++  +
Sbjct: 199 LDDNRLEVAKKLGATHTVNSAKGDAIEQVLE 229

This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 345

>gnl|CDD|176223 cd08262, Zn_ADH8, Alcohol dehydrogenases of the MDR family

 Score = 83.9 bits (208), Expect = 3e-18
 Identities = 55/213 (25%), Positives = 86/213 (40%), Gaps = 44/213 (20%)

Query: 33  GAEDVYIKVLYCGICHTDIH-----------QIKNDLGMSNYPMVPGHEVVGEVKEVGSE 81
           G   V +KVL CGIC +D+H                L      +V GHE  GEV + G  
Sbjct: 22  GPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGEVVDYGPG 81

Query: 82  VSN-FKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMV 140
                KVG +V    L+ C      C           I    +         GG+AE M+
Sbjct: 82  TERKLKVGTRVTSLPLLLC-GQGASC----------GIGLSPE-------APGGYAEYML 123

Query: 141 VDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLS--HFGLKQSGLRGG----ILGLGGVGH 194
           + +  ++++PDG+++E AA        +  PL+     ++++ L  G    ++G G +G 
Sbjct: 124 LSEALLLRVPDGLSMEDAA--------LTEPLAVGLHAVRRARLTPGEVALVIGCGPIGL 175

Query: 195 MGVLIAKAMGHHVTVISSSDKKRVEAMEHLGAD 227
             +   KA G    V S    +R      +GAD
Sbjct: 176 AVIAALKARGVGPIVASDFSPERRALALAMGAD 208

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341

>gnl|CDD|234026 TIGR02823, oxido_YhdH, putative quinone oxidoreductase, YhdH/YhfP family

 Score = 82.6 bits (205), Expect = 9e-18
 Identities = 87/346 (25%), Positives = 141/346 (40%), Gaps = 81/346 (23%)

Query: 36  DVYIKVLYCGICHTDIHQIKNDLG-MSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVG 94
           DV IKV Y  + + D   I    G + +YPM+PG +  G V  V SE   F+ GD+V   
Sbjct: 28  DVLIKVAYSSLNYKDALAITGKGGVVRSYPMIPGIDAAGTV--VSSEDPRFREGDEV--- 82

Query: 95  VLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMA 154
           ++ G                         +   G    GG+++   V   ++V +P+G++
Sbjct: 83  IVTGY-----------------------GL---GVSHDGGYSQYARVPADWLVPLPEGLS 116

Query: 155 LEQAAPLLCAGVTVFSPLSHFGLKQSGL---RGGIL---GLGGVGHMGVLIAKAMGHHVT 208
           L +A  L  AG T  + LS   L+++GL    G +L     GGVG + V I   +G+ V 
Sbjct: 117 LREAMALGTAGFT--AALSVMALERNGLTPEDGPVLVTGATGGVGSLAVAILSKLGYEV- 173

Query: 209 VISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADS--LDYIIDTVPANHPLEPYLSLLK 266
           V S+   +  + ++ LGA + +   D +   +  +       +DTV   H L   L+ LK
Sbjct: 174 VASTGKAEEEDYLKELGASEVIDREDLSPPGKPLEKERWAGAVDTV-GGHTLANVLAQLK 232

Query: 267 LDGK------------------LILTGV----INTPMQFLTPMVMLGRKAITGSFIGSMK 304
             G                    IL GV    I++      PM +  R+A        +K
Sbjct: 233 YGGAVAACGLAGGPDLPTTVLPFILRGVSLLGIDSVY---CPMAL--REAAWQRLATDLK 287

Query: 305 ETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDV 350
                        + S+   I ++ + +A E++     R R VVDV
Sbjct: 288 PRN----------LESITREITLEELPEALEQILAGQHRGRTVVDV 323

This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc [Unknown function, Enzymes of unknown specificity]. Length = 323

>gnl|CDD|176229 cd08268, MDR2, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 82.3 bits (204), Expect = 1e-17
 Identities = 68/314 (21%), Positives = 113/314 (35%), Gaps = 62/314 (19%)

Query: 60  MSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIW 119
               P   G+E  G V+ VG+ V+ F VGD+V V              AD+ QY      
Sbjct: 54  PPPLPARLGYEAAGVVEAVGAGVTGFAVGDRVSV-----------IPAADLGQY------ 96

Query: 120 SYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQ 179
                        G +AE  +V    VVK+PDG++  +AA L    +T +  L      +
Sbjct: 97  -------------GTYAEYALVPAAAVVKLPDGLSFVEAAALWMQYLTAYGALVELAGLR 143

Query: 180 SG----LRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSD- 234
            G    +         VG   + IA A G  V   + + +KR +A+  LGA   +V+ + 
Sbjct: 144 PGDSVLITAAS---SSVGLAAIQIANAAGATVIATTRTSEKR-DALLALGAAHVIVTDEE 199

Query: 235 --ATRMQEAADS--LDYIIDTVPANHPLEPYLSLLKLDGKLILTGVIN---TPMQFLTPM 287
                +        +D + D V            L   G L++ G ++   TP     P+
Sbjct: 200 DLVAEVLRITGGKGVDVVFDPVGGPQ-FAKLADALAPGGTLVVYGALSGEPTPF----PL 254

Query: 288 VMLGRKAIT------GSFIGSMKETKEMLEF----CREKGVTSMI-EVIKMDYVNKAFER 336
               +K++T             +  +  + F         +  ++  V   D + +A   
Sbjct: 255 KAALKKSLTFRGYSLDEITLDPEARRRAIAFILDGLASGALKPVVDRVFPFDDIVEAHRY 314

Query: 337 LEKNDVRYRFVVDV 350
           LE      + VV  
Sbjct: 315 LESGQQIGKIVVTP 328

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 328

>gnl|CDD|176236 cd08275, MDR3, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 81.9 bits (203), Expect = 2e-17
 Identities = 65/259 (25%), Positives = 100/259 (38%), Gaps = 65/259 (25%)

Query: 37  VYIKVLYCGICHTDIHQIKNDLGMSNY------PMVPGHEVVGEVKEVGSEVSNFKVGDK 90
           V ++V  CG+   D+           Y      P VPG E  G V+ VG  V +FKVGD+
Sbjct: 29  VRVRVEACGLNFADLMAR-----QGLYDSAPKPPFVPGFECAGTVEAVGEGVKDFKVGDR 83

Query: 91  VGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIP 150
           V     +G  R                               GG+AE + V    V  +P
Sbjct: 84  V-----MGLTRF------------------------------GGYAEVVNVPADQVFPLP 108

Query: 151 DGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGL-----GGVGHMGVLIAKAMGH 205
           DGM+ E+AA      +T +  L   G     LR G   L     GGVG     + K +  
Sbjct: 109 DGMSFEEAAAFPVNYLTAYYALFELG----NLRPGQSVLVHSAAGGVGLAAGQLCKTV-P 163

Query: 206 HVTVISSSDKKRVEAMEHLGADQ---YLVSSDATRMQEAA-DSLDYIIDT--VPANHPLE 259
           +VTV+ ++   + EA++  G      Y        +++ + + +D ++D           
Sbjct: 164 NVTVVGTASASKHEALKENGVTHVIDYRTQDYVEEVKKISPEGVDIVLDALGGEDTRKS- 222

Query: 260 PYLSLLKLDGKLILTGVIN 278
               LLK  G+L++ G  N
Sbjct: 223 --YDLLKPMGRLVVYGAAN 239

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176192 cd08230, glucose_DH, Glucose dehydrogenase

 Score = 81.5 bits (202), Expect = 3e-17
 Identities = 77/292 (26%), Positives = 109/292 (37%), Gaps = 49/292 (16%)

Query: 36  DVYIKVLYCGICHTDIHQIKNDLGMSNYP-----MVPGHEVVGEVKEVGSEVSNFKVGDK 90
           +V ++ L  G+C TD  +I         P     +V GHE +G V+EVG   S    GD 
Sbjct: 27  EVLVRTLEVGVCGTD-REIVAG-EYGTAPPGEDFLVLGHEALGVVEEVGDG-SGLSPGDL 83

Query: 91  VGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTD-GKPTQGGF-AESMVVDQKFVVK 148
           V V  +      C  C      +C          YT+ G     GF  E  V D +++VK
Sbjct: 84  V-VPTVRRPPGKCLNCRIGRPDFCE------TGEYTERGIKGLHGFMREYFVDDPEYLVK 136

Query: 149 IPDGMALEQAAPLLCAGVTVFSPLS-------HFGLKQSGL------RGGILGLGGVGHM 195
           +P    L     LL        PLS            Q  L      R  +LG G +G +
Sbjct: 137 VPPS--LADVGVLL-------EPLSVVEKAIEQAEAVQKRLPTWNPRRALVLGAGPIGLL 187

Query: 196 GVLIAKAMGHHVTVISSSDKKRVEA--MEHLGADQYLVSSDATRMQEAADSLDYIIDTVP 253
             L+ +  G  V V++  D    +A  +E LGA     S       +     D II+   
Sbjct: 188 AALLLRLRGFEVYVLNRRDPPDPKADIVEELGATYVNSSKTPVAEVKLVGEFDLIIEATG 247

Query: 254 ANHPLEPYLSLLKLDGKLILTGVI----NTPM---QFLTPMVMLGRKAITGS 298
                   L  L  +G +IL GV        +   +    +V LG KA+ GS
Sbjct: 248 VPPLAFEALPALAPNGVVILFGVPGGGREFEVDGGELNRDLV-LGNKALVGS 298

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 355

>gnl|CDD|176215 cd08253, zeta_crystallin, Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

 Score = 79.9 bits (198), Expect = 8e-17
 Identities = 73/291 (25%), Positives = 113/291 (38%), Gaps = 51/291 (17%)

Query: 33  GAEDVYIKVLYCGICHTDIHQIK-NDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKV 91
           G  +V ++V   G+   D +       G+   P VPG +  G V+ VG  V   KVGD+V
Sbjct: 26  GPGEVLVRVHASGVNPVDTYIRAGAYPGLPPLPYVPGSDGAGVVEAVGEGVDGLKVGDRV 85

Query: 92  GVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPD 151
                                      W  N         QG  AE +VV    +V +PD
Sbjct: 86  ---------------------------WLTN---LGWGRRQGTAAEYVVVPADQLVPLPD 115

Query: 152 GMALEQAAPLLCAGVTVFSPLSHFGLKQS-GLRGG--IL---GLGGVGHMGVLIAKAMGH 205
           G++ EQ A L    +T     ++  L    G + G  +L   G G VGH  V +A+  G 
Sbjct: 116 GVSFEQGAALGIPALT-----AYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGA 170

Query: 206 HVTVISSSDKKRVEAMEHLGADQ---YLVSSDATRMQEAAD--SLDYIIDTVPANHPLEP 260
            V   +SS +   E +   GAD    Y     A R+  A     +D II+ +   + L  
Sbjct: 171 RVIATASSAEGA-ELVRQAGADAVFNYRAEDLADRILAATAGQGVDVIIEVLANVN-LAK 228

Query: 261 YLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLE 311
            L +L   G++++ G  +  ++   P+  L  K  +   +     T E   
Sbjct: 229 DLDVLAPGGRIVVYG--SGGLRGTIPINPLMAKEASIRGVLLYTATPEERA 277

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176183 cd05280, MDR_yhdh_yhfp, Yhdh and yhfp-like putative quinone oxidoreductases

 Score = 78.7 bits (195), Expect = 2e-16
 Identities = 64/229 (27%), Positives = 97/229 (42%), Gaps = 44/229 (19%)

Query: 34  AEDVYIKVLYCGICHTDIHQIKNDLG-MSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVG 92
             DV I+V Y  + + D      + G   NYP  PG +  G V  V S+   F+ GD+V 
Sbjct: 27  EGDVLIRVHYSSLNYKDALAATGNGGVTRNYPHTPGIDAAGTV--VSSDDPRFREGDEVL 84

Query: 93  VGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDG 152
           V    G                        D+   G  T GGFAE + V   +VV +P+G
Sbjct: 85  V---TGY-----------------------DL---GMNTDGGFAEYVRVPADWVVPLPEG 115

Query: 153 MALEQAAPLLCAGVTVFSPLSHFGLKQSGLR---GGIL---GLGGVGHMGVLIAKAMGHH 206
           ++L +A  L  AG T  + LS   L+ +G     G +L     GGVG + V I   +G+ 
Sbjct: 116 LSLREAMILGTAGFT--AALSVHRLEDNGQTPEDGPVLVTGATGGVGSIAVAILAKLGYT 173

Query: 207 VTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAA---DSLDYIIDTV 252
           V  ++  +++  + ++ LGA + L   D     +           IDTV
Sbjct: 174 VVALTGKEEQ-ADYLKSLGASEVLDREDLLDESKKPLLKARWAGAIDTV 221

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176242 cd08282, PFDH_like, Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH)

 Score = 78.8 bits (195), Expect = 3e-16
 Identities = 62/201 (30%), Positives = 91/201 (45%), Gaps = 13/201 (6%)

Query: 35  EDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVG 94
            D  +++    IC +D+H  +   G     +V GHE +GEV+EVGS V + KVGD+V V 
Sbjct: 26  TDAIVRITTTAICGSDLHMYRGRTGA-EPGLVLGHEAMGEVEEVGSAVESLKVGDRVVVP 84

Query: 95  VLVGC--CRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVV---DQKFVVKI 149
             V C  CRNC+     V    N         Y D  P  GG AE + V   D   ++K+
Sbjct: 85  FNVACGRCRNCKRGLTGVCLTVNPGRAGGAYGYVDMGPYGGGQAEYLRVPYAD-FNLLKL 143

Query: 150 PDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGG----ILGLGGVGHMGVLIAKAMGH 205
           PD    ++    L     +F P    GL+ +G++ G    + G G VG M    A   G 
Sbjct: 144 PDRDGAKEKDDYLMLS-DIF-PTGWHGLELAGVQPGDTVAVFGAGPVGLMAAYSAILRGA 201

Query: 206 HVTVISSSDKKRVEAMEHLGA 226
               +     +R++  E +GA
Sbjct: 202 SRVYVVDHVPERLDLAESIGA 222

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 375

>gnl|CDD|176233 cd08272, MDR6, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 78.0 bits (193), Expect = 3e-16
 Identities = 52/172 (30%), Positives = 73/172 (42%), Gaps = 47/172 (27%)

Query: 64  PMVPGHEVVGEVKEVGSEVSNFKVGDKV-----GVGVLVGCCRNCRPCEADVEQYCNKKI 118
           P + G +V G V+ VG  V+ F+VGD+V     G+G L                      
Sbjct: 58  PAILGCDVAGVVEAVGEGVTRFRVGDEVYGCAGGLGGL---------------------- 95

Query: 119 WSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLK 178
                        QG  AE  VVD + +   P  +++ +AA L   G+T +  L      
Sbjct: 96  -------------QGSLAEYAVVDARLLALKPANLSMREAAALPLVGITAWEGLVDRAAV 142

Query: 179 QSGLRGGIL---GLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGAD 227
           Q+G    +L   G GGVGH+ V +AKA G  V   +SS+K        LGAD
Sbjct: 143 QAGQT--VLIHGGAGGVGHVAVQLAKAAGARVYATASSEKAAF--ARSLGAD 190

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 326

>gnl|CDD|176261 cd08301, alcohol_DH_plants, Plant alcohol dehydrogenase

 Score = 77.7 bits (192), Expect = 6e-16
 Identities = 88/366 (24%), Positives = 144/366 (39%), Gaps = 43/366 (11%)

Query: 8   RATIGWAAKDPSGI----LSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNY 63
           +A + W A  P  I    ++P         A +V IK+L+  +CHTD++  +       +
Sbjct: 4   KAAVAWEAGKPLVIEEVEVAP-------PQAMEVRIKILHTSLCHTDVYFWEAKGQTPLF 56

Query: 64  PMVPGHEVVGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKI--WSY 121
           P + GHE  G V+ VG  V++ K GD V + V  G C+ CR C+++    C+        
Sbjct: 57  PRILGHEAAGIVESVGEGVTDLKPGDHV-LPVFTGECKECRHCKSEKSNMCDLLRINTDR 115

Query: 122 NDVYTDGKP---TQGG----------FAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTV 168
             +  DGK      G           F+E  VV    V KI     L++   L C   T 
Sbjct: 116 GVMINDGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPEAPLDKVCLLSCGVSTG 175

Query: 169 FSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQ 228
                +    + G    I GLG VG      A+  G    +    +  + E  +  G  +
Sbjct: 176 LGAAWNVAKVKKGSTVAIFGLGAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKKFGVTE 235

Query: 229 YLVSSDATR-MQEAADSL-----DYIIDTV-PANHPLEPYLSLLKLDGKLILTGVINTPM 281
           ++   D  + +QE    +     DY  +     +  +  +  +    G  +L GV +   
Sbjct: 236 FVNPKDHDKPVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDA 295

Query: 282 QF-LTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEV-------IKMDYVNKA 333
            F   PM +L  + + G+  G  K  K  L    EK +   +E+       +    +NKA
Sbjct: 296 VFSTHPMNLLNGRTLKGTLFGGYK-PKTDLPNLVEKYMKKELELEKFITHELPFSEINKA 354

Query: 334 FERLEK 339
           F+ L K
Sbjct: 355 FDLLLK 360

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 369

>gnl|CDD|176218 cd08256, Zn_ADH2, Alcohol dehydrogenases of the MDR family

 Score = 76.7 bits (189), Expect = 1e-15
 Identities = 53/147 (36%), Positives = 68/147 (46%), Gaps = 21/147 (14%)

Query: 33  GAEDVYIKVLYCGICHTDI---HQIKNDLGMSNY------PMVPGHEVVGEVKEVGSEVS 83
           G  ++ +KV  CGIC  DI   H   +  G  N       PM+PGHE VG V E+G    
Sbjct: 23  GPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGRVVELGEGAE 82

Query: 84  N--FKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVV 141
               KVGD+V    +V  C NCR C       C K     +D+Y       GG AE M  
Sbjct: 83  ERGVKVGDRVISEQIVP-CWNCRFCNRGQYWMCQK-----HDLYGFQNNVNGGMAEYMRF 136

Query: 142 DQKFVV-KIPDGMALEQAA---PLLCA 164
            ++ +V K+PD +  E A    PL CA
Sbjct: 137 PKEAIVHKVPDDIPPEDAILIEPLACA 163

This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 350

>gnl|CDD|176217 cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like, 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

 Score = 75.4 bits (186), Expect = 2e-15
 Identities = 57/220 (25%), Positives = 87/220 (39%), Gaps = 58/220 (26%)

Query: 64  PMVPGHEVVGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYND 123
           P+ PG+  VG V EVGS V+ FK GD+V                     +C         
Sbjct: 21  PLPPGYSSVGRVVEVGSGVTGFKPGDRV---------------------FCF-------- 51

Query: 124 VYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHF---GLKQS 180
                    G  AE +VV    +V +PDG+  E+A           + L+     G++ +
Sbjct: 52  ---------GPHAERVVVPANLLVPLPDGLPPERA---------ALTALAATALNGVRDA 93

Query: 181 GLRGG----ILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGADQYLVSSDA 235
             R G    ++GLG VG +   +AKA G   V  +     +R  A     AD     +  
Sbjct: 94  EPRLGERVAVVGLGLVGLLAAQLAKAAGAREVVGVDPDAARRELAEALGPADP---VAAD 150

Query: 236 TRMQEAADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTG 275
           T  +      D +I+   +   LE  L LL+  G+++L G
Sbjct: 151 TADEIGGRGADVVIEASGSPSALETALRLLRDRGRVVLVG 190

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 277

>gnl|CDD|176204 cd08242, MDR_like, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 75.7 bits (187), Expect = 2e-15
 Identities = 83/316 (26%), Positives = 127/316 (40%), Gaps = 56/316 (17%)

Query: 39  IKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVGVLVG 98
           ++VL  GIC+TD+   K   G   +P VPGHE VG V+E         VG +V VG +  
Sbjct: 29  VRVLLAGICNTDLEIYK---GYYPFPGVPGHEFVGIVEEGPEAEL---VGKRV-VGEINI 81

Query: 99  CCRNCRPCEADVEQYC-NKK---IWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMA 154
            C  C  C   +  +C N+    I   +          G FAE + +  + +  +PD + 
Sbjct: 82  ACGRCEYCRRGLYTHCPNRTVLGIVDRD----------GAFAEYLTLPLENLHVVPDLVP 131

Query: 155 LEQAA---PLLCAGVTVFSPLSHFGLKQSGLRGG----ILGLGGVGHMGVLIAKAMGHHV 207
            EQA    P L A + +        L+Q  +  G    +LG G +G +   +    G  V
Sbjct: 132 DEQAVFAEP-LAAALEI--------LEQVPITPGDKVAVLGDGKLGLLIAQVLALTGPDV 182

Query: 208 TVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPYLSLLKL 267
            ++    +K   A   LG +  L        +      D +++   +   LE  L L++ 
Sbjct: 183 VLVGRHSEKLALA-RRLGVETVLPDEA----ESEGGGFDVVVEATGSPSGLELALRLVRP 237

Query: 268 DGKLILTGVINTPMQF-LTPMVMLGRKAIT--GSFIGSMKETKEMLEFCREKG---VTSM 321
            G ++L      P  F LT  V      IT  GS  G       +L     KG   V  +
Sbjct: 238 RGTVVLKSTYAGPASFDLTKAV---VNEITLVGSRCGPFAPALRLL----RKGLVDVDPL 290

Query: 322 IE-VIKMDYVNKAFER 336
           I  V  ++   +AFER
Sbjct: 291 ITAVYPLEEALEAFER 306

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319

>gnl|CDD|176226 cd08265, Zn_ADH3, Alcohol dehydrogenases of the MDR family

 Score = 75.6 bits (186), Expect = 4e-15
 Identities = 60/215 (27%), Positives = 95/215 (44%), Gaps = 28/215 (13%)

Query: 30  RNTGAEDVYIKVLYCGICHTDIHQIKNDL-------GMSNYPMVPGHEVVGEVKEVGSEV 82
            N   +++ I+V  CGIC +DIH  + D        G++ +P+V GHE  G V++ G  V
Sbjct: 47  PNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGVVEKTGKNV 106

Query: 83  SNFKVGDKVGVGVLVGC--CRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMV 140
            NF+ GD V    ++ C  CR CR          N K   ++          G FAE + 
Sbjct: 107 KNFEKGDPVTAEEMMWCGMCRACR--SGSPNHCKNLKELGFS--------ADGAFAEYIA 156

Query: 141 VDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLS--HFGL--KQSGLRGG----ILGLGGV 192
           V+ ++  +I +   +        AG  V  P S  + GL  +  G R G    + G G +
Sbjct: 157 VNARYAWEINELREIYSEDKAFEAGALV-EPTSVAYNGLFIRGGGFRPGAYVVVYGAGPI 215

Query: 193 GHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGAD 227
           G   + +AKA G    +     ++R    + +GAD
Sbjct: 216 GLAAIALAKAAGASKVIAFEISEERRNLAKEMGAD 250

This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 384

>gnl|CDD|176234 cd08273, MDR8, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 73.8 bits (182), Expect = 8e-15
 Identities = 61/252 (24%), Positives = 97/252 (38%), Gaps = 43/252 (17%)

Query: 28  TLRNTGAEDVYIKVLYCGICHTDIHQIKNDL--GMSNYPMVPGHEVVGEVKEVGSEVSNF 85
            L    A +V +KV   G+   D+ Q++  L       P  PG+++VG V  +GS V+ F
Sbjct: 21  DLPEPAAGEVVVKVEASGVSFADV-QMRRGLYPDQPPLPFTPGYDLVGRVDALGSGVTGF 79

Query: 86  KVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKF 145
           +VGD+V   +                                     GG AE + +D K+
Sbjct: 80  EVGDRV-AALTRV----------------------------------GGNAEYINLDAKY 104

Query: 146 VVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMG 204
           +V +P+G+   +A  L+   VT +  L       +G R  I G  GGVG    L+  A+ 
Sbjct: 105 LVPVPEGVDAAEAVCLVLNYVTAYQMLHRAAKVLTGQRVLIHGASGGVG--QALLELALL 162

Query: 205 HHVTVISSSDKKRVEAMEHLGADQYLVS-SDATRMQEAADSLDYIIDTVPANHPLEPYLS 263
               V  ++ ++   A+  LGA        D          +D + D V      E   +
Sbjct: 163 AGAEVYGTASERNHAALRELGATPIDYRTKDWLPAMLTPGGVDVVFDGVGGES-YEESYA 221

Query: 264 LLKLDGKLILTG 275
            L   G L+  G
Sbjct: 222 ALAPGGTLVCYG 233

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 331

>gnl|CDD|176243 cd08283, FDH_like_1, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1

 Score = 74.1 bits (183), Expect = 1e-14
 Identities = 54/192 (28%), Positives = 83/192 (43%), Gaps = 33/192 (17%)

Query: 36  DVYIKVLYCGICHTDIHQIKNDL-GMSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVG 94
           D  ++V    IC +D+H     + GM     + GHE +G V+EVG EV N KVGD+V V 
Sbjct: 27  DAIVRVTATAICGSDLHLYHGYIPGMKK-GDILGHEFMGVVEEVGPEVRNLKVGDRVVVP 85

Query: 95  VLVGCCRNCRPCEADVEQYCNKK----------------IWSYNDVYTDGKPTQGGFAES 138
             + C   C  C+  +   C+                  I+ Y+ +   G    GG AE 
Sbjct: 86  FTIACGE-CFYCKRGLYSQCDNTNPSAEMAKLYGHAGAGIFGYSHLT--G-GYAGGQAEY 141

Query: 139 MVVDQKFV--VKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGG----ILGLGGV 192
           + V    V   KIPD ++ E+A  L  + +    P  +   + + ++ G    + G G V
Sbjct: 142 VRVPFADVGPFKIPDDLSDEKA--LFLSDIL---PTGYHAAELAEVKPGDTVAVWGCGPV 196

Query: 193 GHMGVLIAKAMG 204
           G      AK +G
Sbjct: 197 GLFAARSAKLLG 208

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 386

>gnl|CDD|132409 TIGR03366, HpnZ_proposed, putative phosphonate catabolism associated alcohol dehydrogenase

 Score = 72.5 bits (178), Expect = 2e-14
 Identities = 57/220 (25%), Positives = 82/220 (37%), Gaps = 12/220 (5%)

Query: 66  VPGHEVVGEVKEVGSEVSNFKVGDKVGVG------VLVGCCRNCRPCEADVEQYCNKKIW 119
           V GHE+VGEV  +    +    G  + +G      V V C R C  C   + Q C+    
Sbjct: 1   VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGR-CFRCRRGLPQKCDSLRK 59

Query: 120 SYNDVYTDGKPTQGGFAESMVVDQKF-VVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLK 178
             ++    G P  GG+AE   +     +V +PD +    AAP  CA  TV + L   G  
Sbjct: 60  YGHEALDSGWPLSGGYAEHCHLPAGTAIVPVPDDLPDAVAAPAGCATATVMAALEAAG-D 118

Query: 179 QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRM 238
             G R  ++G G +G      A A G    V +     R E     GA            
Sbjct: 119 LKGRRVLVVGAGMLGLTAAAAAAAAGAARVVAADPSPDRRELALSFGATALAEPEVLAER 178

Query: 239 QEAAD---SLDYIIDTVPANHPLEPYLSLLKLDGKLILTG 275
           Q        +D  ++   A   +   L  L + G  +L G
Sbjct: 179 QGGLQNGRGVDVALEFSGATAAVRACLESLDVGGTAVLAG 218

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds. Length = 280

>gnl|CDD|176260 cd08300, alcohol_DH_class_III, class III alcohol dehydrogenases

 Score = 72.3 bits (178), Expect = 4e-14
 Identities = 65/242 (26%), Positives = 99/242 (40%), Gaps = 20/242 (8%)

Query: 8   RATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVP 67
           +A + W A  P   LS     +    A +V IK+L  G+CHTD + +        +P++ 
Sbjct: 4   KAAVAWEAGKP---LSIEEVEVAPPKAGEVRIKILATGVCHTDAYTLSGADPEGLFPVIL 60

Query: 68  GHEVVGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNK-KIWSYNDVYT 126
           GHE  G V+ VG  V++ K GD V + +    C  C+ C++     C K +      +  
Sbjct: 61  GHEGAGIVESVGEGVTSVKPGDHV-IPLYTPECGECKFCKSGKTNLCQKIRATQGKGLMP 119

Query: 127 DGKP--TQGG-----------FAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLS 173
           DG    +  G           F+E  VV +  V KI     L++   L C GVT      
Sbjct: 120 DGTSRFSCKGKPIYHFMGTSTFSEYTVVAEISVAKINPEAPLDKVCLLGC-GVTTGYGAV 178

Query: 174 HFGLK-QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVS 232
               K + G    + GLG VG   +  AKA G    +    +  + E  +  GA   +  
Sbjct: 179 LNTAKVEPGSTVAVFGLGAVGLAVIQGAKAAGASRIIGIDINPDKFELAKKFGATDCVNP 238

Query: 233 SD 234
            D
Sbjct: 239 KD 240

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 368

>gnl|CDD|132245 TIGR03201, dearomat_had, 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

 Score = 71.1 bits (174), Expect = 9e-14
 Identities = 66/222 (29%), Positives = 103/222 (46%), Gaps = 18/222 (8%)

Query: 13  WAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSN-YPMVPGHEV 71
           W   +P   +      +   GA DV +KV  CG+CHTD+      +  ++  P+  GHE+
Sbjct: 2   WMMTEPGKPMVKTRVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVRTNHALPLALGHEI 61

Query: 72  VGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPT 131
            G V + G+  +++ +G  V V  ++  C  C  C+      C  +    ND+       
Sbjct: 62  SGRVIQAGAGAASW-IGKAVIVPAVIP-CGECELCKTGRGTICRAQKMPGNDM------- 112

Query: 132 QGGFAESMVVDQKFVVKIPD------GMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGG 185
           QGGFA  +VV  K +  + +      G+ LE  + +  A  T +      GLK+  L   
Sbjct: 113 QGGFASHIVVPAKGLCVVDEARLAAAGLPLEHVSVVADAVTTPYQAAVQAGLKKGDL-VI 171

Query: 186 ILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGAD 227
           ++G GGVG   V  AKAMG  V  I   D +++E M+  GAD
Sbjct: 172 VIGAGGVGGYMVQTAKAMGAAVVAI-DIDPEKLEMMKGFGAD 212

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA. Length = 349

>gnl|CDD|176230 cd08269, Zn_ADH9, Alcohol dehydrogenases of the MDR family

 Score = 70.5 bits (173), Expect = 1e-13
 Identities = 62/257 (24%), Positives = 95/257 (36%), Gaps = 63/257 (24%)

Query: 36  DVYIKVLYCGICHTDIHQIKNDLGMSNYPM---VPGHEVVGEVKEVGSEVSNFKVGDKVG 92
            V ++V  CG+C +D+           YP     PGHE  G V  +G  V    VGD+V 
Sbjct: 21  QVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGRVVALGPGVRGLAVGDRVA 80

Query: 93  VGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIP-- 150
                                      S            G FAE  + D    V +P  
Sbjct: 81  -------------------------GLSG-----------GAFAEYDLADADHAVPLPSL 104

Query: 151 -DGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGG----ILGLGGVGHMGVLIAKAMGH 205
            DG A     PL CA + VF        ++  +R G    ++G G +G + + +A A G 
Sbjct: 105 LDGQAFP-GEPLGCA-LNVF--------RRGWIRAGKTVAVIGAGFIGLLFLQLAAAAGA 154

Query: 206 HVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSL------DYIIDTVPANHPLE 259
              +       R+     LGA + +V+ D+  + E    L      D +I+ V    PL+
Sbjct: 155 RRVIAIDRRPARLALARELGATE-VVTDDSEAIVERVRELTGGAGADVVIEAVGHQWPLD 213

Query: 260 PYLSLLKLDGKLILTGV 276
               L+   G+L++ G 
Sbjct: 214 LAGELVAERGRLVIFGY 230

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 312

>gnl|CDD|182229 PRK10083, PRK10083, putative oxidoreductase; Provisional

 Score = 70.2 bits (172), Expect = 2e-13
 Identities = 68/264 (25%), Positives = 113/264 (42%), Gaps = 34/264 (12%)

Query: 33  GAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVG 92
            A +V +KV   GIC +D H  +     + YP V GHE  G +  VG  V   ++G++V 
Sbjct: 23  AAGEVRVKVKLAGICGSDSHIYRGHNPFAKYPRVIGHEFFGVIDAVGEGVDAARIGERVA 82

Query: 93  VGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDG 152
           V  ++ C   C PC       C         V+ D     GGF+E  VV  K   +IPD 
Sbjct: 83  VDPVISCGH-CYPCSIGKPNVCTS--LVVLGVHRD-----GGFSEYAVVPAKNAHRIPDA 134

Query: 153 MALEQAAPL----LCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMG--HH 206
           +A + A  +    + A VT        G         +  + G G +G+ I + +   ++
Sbjct: 135 IADQYAVMVEPFTIAANVT-----GRTGP----TEQDVALIYGAGPVGLTIVQVLKGVYN 185

Query: 207 VTVISSSDK--KRVEAMEHLGADQYLVSSDATRMQEAADSLD----YIIDTVPANHP--L 258
           V  +  +D+  +R+   +  GAD  + ++    + EA +        IID     HP  L
Sbjct: 186 VKAVIVADRIDERLALAKESGADWVINNAQEP-LGEALEEKGIKPTLIIDAA--CHPSIL 242

Query: 259 EPYLSLLKLDGKLILTGVINTPMQ 282
           E  ++L     +++L G  + P +
Sbjct: 243 EEAVTLASPAARIVLMGFSSEPSE 266

Length = 339

>gnl|CDD|173547 PTZ00354, PTZ00354, alcohol dehydrogenase; Provisional

 Score = 68.5 bits (168), Expect = 6e-13
 Identities = 80/331 (24%), Positives = 133/331 (40%), Gaps = 68/331 (20%)

Query: 36  DVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGH------EVVGEVKEVGSEVSNFKVGD 89
           DV IKV   G+   D  Q         YP  PG       EV G V++VGS+V  FK GD
Sbjct: 30  DVLIKVSAAGVNRADTLQ-----RQGKYPPPPGSSEILGLEVAGYVEDVGSDVKRFKEGD 84

Query: 90  KVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKI 149
           +V + +L G                                  GG+AE  V  +  V+ I
Sbjct: 85  RV-MALLPG----------------------------------GGYAEYAVAHKGHVMHI 109

Query: 150 PDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGI-LGLGGVGHMGVLIAKAMGHHVT 208
           P G   E+AA +  A +T +  L   G  + G    I  G  GVG     +A+  G    
Sbjct: 110 PQGYTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGAATI 169

Query: 209 VISSSDKKRVEAMEHLGADQYLVSSDATRMQEA------ADSLDYIIDTVPANHPLEPYL 262
           + +SS++K V+  + L A   +   D                ++ ++D V  ++ L    
Sbjct: 170 ITTSSEEK-VDFCKKLAAIILIRYPDEEGFAPKVKKLTGEKGVNLVLDCVGGSY-LSETA 227

Query: 263 SLLKLDGKLILTGVINTP-MQFLTPMVMLGRKA-ITGSFIGSMKE----------TKEML 310
            +L +DGK I+ G +    ++    + +L ++A I  S + S  +           +E+L
Sbjct: 228 EVLAVDGKWIVYGFMGGAKVEKFNLLPLLRKRASIIFSTLRSRSDEYKADLVASFEREVL 287

Query: 311 EFCREKGVTSMIE-VIKMDYVNKAFERLEKN 340
            +  E  +  +++    ++ V +A   LE+N
Sbjct: 288 PYMEEGEIKPIVDRTYPLEEVAEAHTFLEQN 318

Length = 334

>gnl|CDD|176212 cd08250, Mgc45594_like, Mgc45594 gene product and other MDR family members

 Score = 68.4 bits (168), Expect = 6e-13
 Identities = 58/203 (28%), Positives = 78/203 (38%), Gaps = 53/203 (26%)

Query: 33  GAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVP---GHEVVGEVKEVGSEVSNFKVGD 89
           G  +V +K  + GI  +DI+           P  P   G E VGEV  VG  V++FKVGD
Sbjct: 29  GPGEVLVKNRFVGINASDINFTAGRYDPGVKP--PFDCGFEGVGEVVAVGEGVTDFKVGD 86

Query: 90  KVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKI 149
            V                                       + G FAE  VV  +  V +
Sbjct: 87  AVAT------------------------------------MSFGAFAEYQVVPARHAVPV 110

Query: 150 PDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGL-----GGVGHMGVLIAKAMG 204
           P+     +  PLL +G+T    L   G     ++ G   L     GG G   V +AK  G
Sbjct: 111 PE--LKPEVLPLLVSGLTASIALEEVG----EMKSGETVLVTAAAGGTGQFAVQLAKLAG 164

Query: 205 HHVTVISSSDKKRVEAMEHLGAD 227
            HV    SSD+K  E ++ LG D
Sbjct: 165 CHVIGTCSSDEK-AEFLKSLGCD 186

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329

>gnl|CDD|131865 TIGR02818, adh_III_F_hyde, S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

 Score = 66.8 bits (163), Expect = 3e-12
 Identities = 56/237 (23%), Positives = 93/237 (39%), Gaps = 18/237 (7%)

Query: 8   RATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVP 67
           RA + WAA  P   L      +      +V ++++  G+CHTD   +        +P++ 
Sbjct: 3   RAAVAWAAGQP---LKIEEVDVEMPQKGEVLVRIVATGVCHTDAFTLSGADPEGVFPVIL 59

Query: 68  GHEVVGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYND---- 123
           GHE  G V+ VG  V++ KVGD V + +    C  C+ C +     C     +       
Sbjct: 60  GHEGAGIVEAVGEGVTSVKVGDHV-IPLYTAECGECKFCLSGKTNLCVAVRETQGKGLMP 118

Query: 124 -----VYTDGKPTQ-----GGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLS 173
                   DG+P         F+E  VV +  + KI     LE+   L C   T    + 
Sbjct: 119 DGTSRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKINPAAPLEEVCLLGCGVTTGIGAVL 178

Query: 174 HFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYL 230
           +    + G    + GLGG+G   +  A+       +    +  + E  + LGA   +
Sbjct: 179 NTAKVEEGDTVAVFGLGGIGLSVIQGARMAKASRIIAIDINPAKFELAKKLGATDCV 235

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols [Cellular processes, Detoxification, Energy metabolism, Fermentation]. Length = 368

>gnl|CDD|176645 cd05282, ETR_like, 2-enoyl thioester reductase-like

 Score = 66.1 bits (162), Expect = 3e-12
 Identities = 55/219 (25%), Positives = 87/219 (39%), Gaps = 48/219 (21%)

Query: 32  TGAEDVYIKVLYCGICHTDIHQIKNDLGMS-NYPMVPGHEVVGEVKEVGSEVSNFKVGDK 90
            G  +V +++L   I  +D+  I    G     P VPG+E VG V EVGS VS   VG +
Sbjct: 24  PGPGEVLVRMLAAPINPSDLITISGAYGSRPPLPAVPGNEGVGVVVEVGSGVSGLLVGQR 83

Query: 91  VGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIP 150
           V   + +G                                 +G + E +V     ++ +P
Sbjct: 84  V---LPLG--------------------------------GEGTWQEYVVAPADDLIPVP 108

Query: 151 DGMALEQAA-----PLLCAGVTVFSPLSHFGLKQSGLRGGILGLG-GVGHMGVLIAKAMG 204
           D ++ EQAA     PL     T +  L+ +     G           VG M + +AK +G
Sbjct: 109 DSISDEQAAMLYINPL-----TAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLLG 163

Query: 205 HHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAAD 243
                +   D++ VE ++ LGAD+ + SS     Q   +
Sbjct: 164 FKTINVVRRDEQ-VEELKALGADEVIDSSPEDLAQRVKE 201

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 323

>gnl|CDD|176249 cd08289, MDR_yhfp_like, Yhfp putative quinone oxidoreductases

 Score = 65.8 bits (161), Expect = 5e-12
 Identities = 56/200 (28%), Positives = 86/200 (43%), Gaps = 41/200 (20%)

Query: 36  DVYIKVLYCGICHTDIHQIKNDLGM-SNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVG 94
           DV I+V Y  + + D         +   YP +PG ++ G V E  S    FK GD+V V 
Sbjct: 29  DVLIRVAYSSVNYKDGLASIPGGKIVKRYPFIPGIDLAGTVVE--SNDPRFKPGDEVIV- 85

Query: 95  VLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMA 154
                                         Y  G    GG++E   V  ++VV +P G+ 
Sbjct: 86  ----------------------------TSYDLGVSHHGGYSEYARVPAEWVVPLPKGLT 117

Query: 155 LEQAAPLLCAGVTVFSPLSHFGLKQSGL---RGGIL---GLGGVGHMGVLIAKAMGHHVT 208
           L++A  L  AG T  + LS   L+++GL   +G +L     GGVG + V I   +G+ V 
Sbjct: 118 LKEAMILGTAGFT--AALSIHRLEENGLTPEQGPVLVTGATGGVGSLAVSILAKLGYEV- 174

Query: 209 VISSSDKKRVEAMEHLGADQ 228
           V S+      + ++ LGA +
Sbjct: 175 VASTGKADAADYLKKLGAKE 194

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 326

>gnl|CDD|176235 cd08274, MDR9, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 65.8 bits (161), Expect = 5e-12
 Identities = 66/276 (23%), Positives = 105/276 (38%), Gaps = 44/276 (15%)

Query: 33  GAEDVYIKVLYCGICHTDIH----------------QIKNDLGMSN----YPMVPGHEVV 72
              +V I+V  CG+ +TDI+                    + G       +P + G ++V
Sbjct: 27  APGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPRIQGADIV 86

Query: 73  GEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQ 132
           G V  VG  V   ++G++V V           P   D  +     I         G    
Sbjct: 87  GRVVAVGEGVDTARIGERVLV----------DPSIRDPPEDDPADIDYI------GSERD 130

Query: 133 GGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGL-GG 191
           GGFAE  VV  +    +   ++  + A   C+  T  + L   G+  +G    + G  GG
Sbjct: 131 GGFAEYTVVPAENAYPVNSPLSDVELATFPCSYSTAENMLERAGVG-AGETVLVTGASGG 189

Query: 192 VGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAA---DSLDYI 248
           VG   V +AK  G  V  ++ + K   EA+  LGAD  ++          A   + +D +
Sbjct: 190 VGSALVQLAKRRGAIVIAVAGAAK--EEAVRALGADTVILRDAPLLADAKALGGEPVDVV 247

Query: 249 IDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFL 284
            D V         L LL+  G+ +  G I  P+  L
Sbjct: 248 ADVV-GGPLFPDLLRLLRPGGRYVTAGAIAGPVVEL 282

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 350

>gnl|CDD|176214 cd08252, AL_MDR, Arginate lyase and other MDR family members

 Score = 65.2 bits (160), Expect = 7e-12
 Identities = 67/263 (25%), Positives = 106/263 (40%), Gaps = 57/263 (21%)

Query: 64  PMVPGHEVVGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYND 123
           P + G +  G V+ VGSEV+ FKVGD+V                                
Sbjct: 60  PKILGWDASGVVEAVGSEVTLFKVGDEV-------------------------------- 87

Query: 124 VYTDGKPT-QGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPL-SHFGLKQSG 181
            Y  G  T  G  AE  +VD++ V   P  ++  +AA L    +T +  L    G+ +  
Sbjct: 88  -YYAGDITRPGSNAEYQLVDERIVGHKPKSLSFAEAAALPLTSLTAWEALFDRLGISEDA 146

Query: 182 LRGG--IL---GLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAME---HLGADQYLVSS 233
              G  +L   G GGVG + + +AK +   +TVI+++   R E++     LGAD  +   
Sbjct: 147 ENEGKTLLIIGGAGGVGSIAIQLAKQLT-GLTVIATA--SRPESIAWVKELGADHVINHH 203

Query: 234 DATRMQEAA---DSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVML 290
                Q  A   + +DYI      +   +    L+   G + L   I  P + L  +  L
Sbjct: 204 QDLAEQLEALGIEPVDYIFCLTDTDQHWDAMAELIAPQGHICL---IVDPQEPL-DLGPL 259

Query: 291 GRKAITGS----FIGSMKETKEM 309
             K+ +      F  SM +T +M
Sbjct: 260 KSKSASFHWEFMFTRSMFQTPDM 282

This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 336

>gnl|CDD|176213 cd08251, polyketide_synthase, polyketide synthase

 Score = 63.6 bits (155), Expect = 2e-11
 Identities = 47/170 (27%), Positives = 66/170 (38%), Gaps = 40/170 (23%)

Query: 59  GMSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKI 118
            M  YP  PG E  G V+ VG  V+   VGD+V  G                        
Sbjct: 33  TMPPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGT----------------------- 69

Query: 119 WSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLK 178
                       + GG A  + V +  VV+ P  ++ E+A  L    +TV    +  GL 
Sbjct: 70  ----------GESMGGHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAFARAGLA 119

Query: 179 QSGLRGGIL---GLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLG 225
           + G    IL     GG G M V +A+  G  +   +SSD K  E ++ LG
Sbjct: 120 K-GEH--ILIQTATGGTGLMAVQLARLKGAEIYATASSDDKL-EYLKQLG 165

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 303

>gnl|CDD|176248 cd08288, MDR_yhdh, Yhdh putative quinone oxidoreductases

 Score = 63.3 bits (155), Expect = 3e-11
 Identities = 53/206 (25%), Positives = 86/206 (41%), Gaps = 47/206 (22%)

Query: 33  GAEDVYIKVLYCGICHTDIHQIKNDLGMSN-YPMVPGHEVVGEVKEVGSEVSNFKVGDKV 91
              DV ++V Y  + + D   I    G+   +P+VPG ++ G V E  S    FK GD+V
Sbjct: 26  PEGDVTVEVHYSTLNYKDGLAITGKGGIVRTFPLVPGIDLAGTVVE--SSSPRFKPGDRV 83

Query: 92  GVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPD 151
              VL G                    W   + +       GG+A+   V   ++V +P+
Sbjct: 84  ---VLTG--------------------WGVGERHW------GGYAQRARVKADWLVPLPE 114

Query: 152 GMALEQAAPLLCAGVTVFSPLSHFGLKQSGLR---GGIL---GLGGVGHMGVLIAKAMGH 205
           G++  QA  +  AG T  + L    L+  G+    G +L     GGVG + V +   +G+
Sbjct: 115 GLSARQAMAIGTAGFT--AMLCVMALEDHGVTPGDGPVLVTGAAGGVGSVAVALLARLGY 172

Query: 206 HVTVISSSDKKRVEAMEH---LGADQ 228
            V   +     R E  ++   LGA +
Sbjct: 173 EVVASTG----RPEEADYLRSLGASE 194

Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 324

>gnl|CDD|182130 PRK09880, PRK09880, L-idonate 5-dehydrogenase; Provisional

 Score = 61.2 bits (149), Expect = 2e-10
 Identities = 72/281 (25%), Positives = 117/281 (41%), Gaps = 36/281 (12%)

Query: 36  DVYIKVLYCGICHTDIHQIKN-DLGMS--NYPMVPGHEVVGEVKEVGSEVSNFKVGDKVG 92
              +++   GIC +D+H  +   +G      PMV GHEV+G++    S+ S  K G  V 
Sbjct: 29  GTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVH--SDSSGLKEGQTVA 86

Query: 93  VGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKP-TQGGFAESMVVDQKFVVKIPD 151
           +      C +C+ C +  E  C    +  + +Y    P   GGF    VVD    +  P+
Sbjct: 87  INP-SKPCGHCKYCLSHNENQCTTMRFFGSAMYF---PHVDGGFTRYKVVDTAQCIPYPE 142

Query: 152 GMALEQAAPLLCAGVTVFS-PLS---HFGLKQSG-LRGGILGLGGVGHMGVLI---AKAM 203
                         V  F+ PL+   H    Q+G L+G  + + GVG +G LI    K +
Sbjct: 143 KAD---------EKVMAFAEPLAVAIH-AAHQAGDLQGKRVFVSGVGPIGCLIVAAVKTL 192

Query: 204 GHHVTVISS-SDKKRVEAMEHLGADQYL--VSSDATRMQEAADSLDYIIDTVPANHPLEP 260
           G    V +  S +    A E +GAD+ +   + D    +      D   +       +  
Sbjct: 193 GAAEIVCADVSPRSLSLARE-MGADKLVNPQNDDLDHYKAEKGYFDVSFEVSGHPSSINT 251

Query: 261 YLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAIT--GSF 299
            L + +  G ++  G+   P +F  PM+ L  K I+  GSF
Sbjct: 252 CLEVTRAKGVMVQVGMGGAPPEF--PMMTLIVKEISLKGSF 290

Length = 343

>gnl|CDD|176247 cd08287, FDH_like_ADH3, formaldehyde dehydrogenase (FDH)-like

 Score = 60.8 bits (148), Expect = 2e-10
 Identities = 62/235 (26%), Positives = 90/235 (38%), Gaps = 27/235 (11%)

Query: 35  EDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVG 94
            D  I+V+   +C +D+   +     +  P   GHE VG V+EVGSEV++ K GD V + 
Sbjct: 26  TDAVIRVVATCVCGSDLWPYRGVSP-TRAPAPIGHEFVGVVEEVGSEVTSVKPGDFV-IA 83

Query: 95  VLVGCCRNCRPCEADVEQYC-NKKIWSYNDVYTDGKPTQGGFAESMVVDQK--FVVKIPD 151
                   C  C A     C +   W        G    GG  E + V      +VK+P 
Sbjct: 84  PFAISDGTCPFCRAGFTTSCVHGGFW--------GAFVDGGQGEYVRVPLADGTLVKVPG 135

Query: 152 GMALEQAAPLLCAGVTVFS---PLSHFGLKQSGLRGG----ILGLGGVGHMGVLIAKAMG 204
                     L   +   S      H     +G+R G    ++G G VG   VL AK +G
Sbjct: 136 ---SPSDDEDLLPSLLALSDVMGTGHHAAVSAGVRPGSTVVVVGDGAVGLCAVLAAKRLG 192

Query: 205 HHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLE 259
               +  S  + R       GA   +    A R +EA   +  +   V A+  LE
Sbjct: 193 AERIIAMSRHEDRQALAREFGATDIV----AERGEEAVARVRELTGGVGADAVLE 243

This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 345

>gnl|CDD|176205 cd08243, quinone_oxidoreductase_like_1, Quinone oxidoreductase (QOR)

 Score = 58.4 bits (142), Expect = 1e-09
 Identities = 76/330 (23%), Positives = 133/330 (40%), Gaps = 58/330 (17%)

Query: 37  VYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVGVL 96
           V I+V   G+  ++I   +       +P V G E VGEV+E       F  G +V    +
Sbjct: 30  VLIRVKAFGLNRSEIFTRQGHSPSVKFPRVLGIEAVGEVEEAPG--GTFTPGQRV-ATAM 86

Query: 97  VGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALE 156
            G  R                  +++          G +AE  +V  + V  I   ++  
Sbjct: 87  GGMGR------------------TFD----------GSYAEYTLVPNEQVYAIDSDLSWA 118

Query: 157 QAAPLLCAGVTVFSPLSHFGLK-QSG----LRGGILGLGGVGHMGVLIAKAMGHHVTVIS 211
           + A L     T +  L    L  Q G    +RGG      VG   + +AKA+G  VT  +
Sbjct: 119 ELAALPETYYTAWGSL-FRSLGLQPGDTLLIRGGT---SSVGLAALKLAKALGATVTA-T 173

Query: 212 SSDKKRVEAMEHLGADQYLV--SSDATRMQEAADSLDYIIDTVPANHPLEPYLSLLKLDG 269
           +   +R   ++ LGAD+ ++   + A +++ A    D +++ V     L+  L  L+  G
Sbjct: 174 TRSPERAALLKELGADEVVIDDGAIAEQLRAAPGGFDKVLELV-GTATLKDSLRHLRPGG 232

Query: 270 KLILTGVIN--------TPMQFLTPMVMLGRKAITGSFIGSMKET--KEMLEFCREKGVT 319
            + +TG++          PM  +   V L    +TGS  G + +T  +E+ +F     + 
Sbjct: 233 IVCMTGLLGGQWTLEDFNPMDDIPSGVNL---TLTGSSSGDVPQTPLQELFDFVAAGHLD 289

Query: 320 SMI-EVIKMDYVNKAFERLEKNDVRYRFVV 348
               +V   D + +A   +E N    + VV
Sbjct: 290 IPPSKVFTFDEIVEAHAYMESNRAFGKVVV 319

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 320

>gnl|CDD|176231 cd08270, MDR4, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 58.2 bits (141), Expect = 1e-09
 Identities = 52/188 (27%), Positives = 76/188 (40%), Gaps = 39/188 (20%)

Query: 133 GGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILG---- 188
           G +AE + V   ++  +PDG++  QAA L  AGVT    L           G +LG    
Sbjct: 86  GAWAELVAVPTGWLAVLPDGVSFAQAATLPVAGVTALRAL--------RRGGPLLGRRVL 137

Query: 189 ----LGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADS 244
                GGVG   V +A   G HV V       R E +  LGA + +V        E + +
Sbjct: 138 VTGASGGVGRFAVQLAALAGAHV-VAVVGSPARAEGLRELGAAEVVVGGS-----ELSGA 191

Query: 245 -LDYIIDTV--PANHPLEPYLSLLKLDGKLILTG-------VINTPMQFLTPMVMLGRKA 294
            +D ++D+V  P    L   L LL   G ++  G       V N P  F+      G + 
Sbjct: 192 PVDLVVDSVGGPQ---LARALELLAPGGTVVSVGSSSGEPAVFN-PAAFVGGG---GGRR 244

Query: 295 ITGSFIGS 302
           +   F+  
Sbjct: 245 LYTFFLYD 252

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 305

>gnl|CDD|234025 TIGR02819, fdhA_non_GSH, formaldehyde dehydrogenase, glutathione-independent

 Score = 58.7 bits (142), Expect = 1e-09
 Identities = 64/211 (30%), Positives = 93/211 (44%), Gaps = 16/211 (7%)

Query: 37  VYIKVLYCGICHTDIHQIKNDLGMSNYP--MVPGHEVVGEVKEVGSEVSNFKVGDKVGVG 94
           V +KV+   IC +D H ++   G +  P  +V GHE+ GEV E G +V   K+GD V V 
Sbjct: 36  VILKVVTTNICGSDQHMVR---GRTTAPTGLVLGHEITGEVIEKGRDVEFIKIGDIVSVP 92

Query: 95  VLVGC--CRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAE-SMVVDQKF-VVKIP 150
             + C  CRNC+     V    N         Y D     GG +E  MV    F ++K P
Sbjct: 93  FNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDMGGWVGGQSEYVMVPYADFNLLKFP 152

Query: 151 D-GMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGG----ILGLGGVGHMGVLIAKAMGH 205
           D   ALE+   L    ++   P  + G   +G+  G    I G G VG      A+ +G 
Sbjct: 153 DRDQALEKIRDLTM--LSDIFPTGYHGAVTAGVGPGSTVYIAGAGPVGLAAAASAQLLGA 210

Query: 206 HVTVISSSDKKRVEAMEHLGADQYLVSSDAT 236
            V ++   +  R+      G +   +S DAT
Sbjct: 211 AVVIVGDLNPARLAQARSFGCETVDLSKDAT 241

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent [Central intermediary metabolism, One-carbon metabolism]. Length = 393

>gnl|CDD|215442 PLN02827, PLN02827, Alcohol dehydrogenase-like

 Score = 58.0 bits (140), Expect = 2e-09
 Identities = 58/243 (23%), Positives = 93/243 (38%), Gaps = 21/243 (8%)

Query: 6   TERATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPM 65
           T RA + W A +    L      +      ++ IKV+   +C +D+   ++    + +P 
Sbjct: 12  TCRAAVAWGAGEA---LVMEEVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQ---ALFPR 65

Query: 66  VPGHEVVGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNK-----KIWS 120
           + GHE  G V+ +G  V+ F+ GD V + V  G C +CR C +     C       K   
Sbjct: 66  IFGHEASGIVESIGEGVTEFEKGDHV-LTVFTGECGSCRHCISGKSNMCQVLGLERKGVM 124

Query: 121 YNDVYT----DGKPTQ-----GGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSP 171
           ++D  T     GKP         F+E  VV     VK+     L +   L C        
Sbjct: 125 HSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPLAPLHKICLLSCGVAAGLGA 184

Query: 172 LSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLV 231
             +      G    I GLG VG      AK  G    +    + ++ E  +  G   ++ 
Sbjct: 185 AWNVADVSKGSSVVIFGLGTVGLSVAQGAKLRGASQIIGVDINPEKAEKAKTFGVTDFIN 244

Query: 232 SSD 234
            +D
Sbjct: 245 PND 247

Length = 378

>gnl|CDD|176250 cd08290, ETR, 2-enoyl thioester reductase (ETR)

 Score = 56.5 bits (137), Expect = 6e-09
 Identities = 57/240 (23%), Positives = 85/240 (35%), Gaps = 62/240 (25%)

Query: 17  DPSGILSPYTYTLRNTGA-EDVYIKVLYCGICHTDIHQIKNDLGMSNYPM---------- 65
           +P  +L   +Y +   G   +V +K+L   I   DI+QI+       YP+          
Sbjct: 11  EPKEVLQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQ-----GVYPIKPPTTPEPPA 65

Query: 66  VPGHEVVGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVY 125
           V G+E VGEV +VGS V + K GD V                                  
Sbjct: 66  VGGNEGVGEVVKVGSGVKSLKPGDWVIP-------------------------------- 93

Query: 126 TDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGG 185
              +P  G +    VV    ++K+P+ +  EQAA L     T +  L  F      L+ G
Sbjct: 94  --LRPGLGTWRTHAVVPADDLIKVPNDVDPEQAATLSVNPCTAYRLLEDFV----KLQPG 147

Query: 186 ---IL--GLGGVGHMGVLIAKAMGHH-VTVISSSDKKRVEAMEH--LGADQYLVSSDATR 237
              I       VG   + +AK +G   + V+               LGAD  L   +   
Sbjct: 148 DWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDRPDLEELKERLKALGADHVLTEEELRS 207

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 341

>gnl|CDD|176208 cd08246, crotonyl_coA_red, crotonyl-CoA reductase

 Score = 55.5 bits (134), Expect = 1e-08
 Identities = 48/172 (27%), Positives = 78/172 (45%), Gaps = 15/172 (8%)

Query: 68  GHEVVGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTD 127
           G +  G V  VG  V N+KVGD+V V   V    +      D     +++IW Y   Y  
Sbjct: 86  GSDASGIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRIWGYETNY-- 143

Query: 128 GKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGG-- 185
                G FA+  +V    ++  P  ++ E+AA  +  G T +  L  FG   + ++ G  
Sbjct: 144 -----GSFAQFALVQATQLMPKPKHLSWEEAAAYMLVGATAYRML--FGWNPNTVKPGDN 196

Query: 186 IL---GLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSD 234
           +L     GG+G M + +A+A G +   + SS++K       LGA+  +   D
Sbjct: 197 VLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYCRA-LGAEGVINRRD 247

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 393

>gnl|CDD|188164 TIGR01751, crot-CoA-red, crotonyl-CoA reductase

 Score = 55.2 bits (133), Expect = 2e-08
 Identities = 49/181 (27%), Positives = 79/181 (43%), Gaps = 29/181 (16%)

Query: 66  VPGHEVVGEVKEVGSEVSNFKVGDKVGVGVLVGCCR------NCRPCEADVEQYCNKKIW 119
           + G +  G V  VG  V+ +KVGD+    V+  C +      + R  + D      ++IW
Sbjct: 80  IIGSDASGVVWRVGPGVTRWKVGDE----VVASCLQVDLTAPDGR--DGDPMLSSEQRIW 133

Query: 120 SYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQ 179
            Y   +       G FAE  +V    ++  P  +  E+AA     G T +  L   G   
Sbjct: 134 GYETNF-------GSFAEFALVKDYQLMPKPKHLTWEEAACPGLTGATAYRQL--VGWNP 184

Query: 180 SGLRGG----ILGL-GGVGHMGVLIAKAMGHH-VTVISSSDKKRVEAMEHLGADQYLVSS 233
           + ++ G    I G  GG+G     +A+A G + V V+SS +K   E    LGA+  +  +
Sbjct: 185 AAVKPGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKA--EYCRSLGAEAVIDRN 242

Query: 234 D 234
           D
Sbjct: 243 D 243

The enzyme modelled by This model is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae. Length = 398

>gnl|CDD|234024 TIGR02817, adh_fam_1, zinc-binding alcohol dehydrogenase family protein

 Score = 54.4 bits (131), Expect = 3e-08
 Identities = 61/264 (23%), Positives = 103/264 (39%), Gaps = 56/264 (21%)

Query: 64  PMVPGHEVVGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYND 123
           P + G +  G V  VG EV+ FK GD+V                           W    
Sbjct: 59  PKILGWDAAGVVVAVGDEVTLFKPGDEV---------------------------W---- 87

Query: 124 VYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPL-SHFGLKQSGL 182
            Y       G  AE  +VD++ V   P  ++  +AA L    +T +  L    G+     
Sbjct: 88  -YAGDIDRPGSNAEFHLVDERIVGHKPKSLSFAEAAALPLTSITAWELLFDRLGINDPVA 146

Query: 183 RGG-----ILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAME---HLGADQYLVSSD 234
                   I G GGVG + + +A+ +   +TVI+++   R E+ E    LGA   +  S 
Sbjct: 147 GDKRALLIIGGAGGVGSILIQLARQLT-GLTVIATA--SRPESQEWVLELGAHHVIDHSK 203

Query: 235 ATRMQEAA---DSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLG 291
             + Q      +++ Y+      +   +  + LL   G+     +I+ P +    +    
Sbjct: 204 PLKAQLEKLGLEAVSYVFSLTHTDQHFKEIVELLAPQGRF---ALIDDPAEL--DISPFK 258

Query: 292 RKAIT----GSFIGSMKETKEMLE 311
           RK+I+      F  SM +T +M+E
Sbjct: 259 RKSISLHWEFMFTRSMFQTADMIE 282

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model [Energy metabolism, Fermentation]. Length = 336

>gnl|CDD|176209 cd08247, AST1_like, AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast

 Score = 53.8 bits (130), Expect = 4e-08
 Identities = 62/255 (24%), Positives = 103/255 (40%), Gaps = 59/255 (23%)

Query: 39  IKVLYCGICHTDIHQIKN--DLGMSNYPMVPGHEVVGEVKEVGSEV-SNFKVGDKVGVGV 95
           +KV    +   D+ ++ N             G +  G + +VGS V S +KVGD+V  G+
Sbjct: 33  VKVHAAALNPVDL-KLYNSYTFHFKVKEKGLGRDYSGVIVKVGSNVASEWKVGDEV-CGI 90

Query: 96  LVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVD----QKFVVKIPD 151
                                    Y   Y      QG  ++ ++VD    +K + + P+
Sbjct: 91  -------------------------YPHPYGG----QGTLSQYLLVDPKKDKKSITRKPE 121

Query: 152 GMALEQAAP-LLCAGVTVFSPLSHFGLK-QSGLRGGILGLGG---VGHMGVLIAKAMGHH 206
            ++LE+AA   L  G T +  L   G K     +  +L LGG   VG   + +AK   + 
Sbjct: 122 NISLEEAAAWPLVLG-TAYQILEDLGQKLGPDSK--VLVLGGSTSVGRFAIQLAKNHYNI 178

Query: 207 VTVISSSDKKRVEAMEHLGADQYLVSSDATR--------MQEAADS--LDYIIDTVPANH 256
            TV+ +   +  E  + LGAD + +  DA          ++        D I+D V   +
Sbjct: 179 GTVVGTCSSRSAELNKKLGAD-HFIDYDAHSGVKLLKPVLENVKGQGKFDLILDCV-GGY 236

Query: 257 PLEPYL-SLLKLDGK 270
            L P++ S+LK   K
Sbjct: 237 DLFPHINSILKPKSK 251

This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 352

>gnl|CDD|176206 cd08244, MDR_enoyl_red, Possible enoyl reductase

 Score = 53.5 bits (129), Expect = 5e-08
 Identities = 46/177 (25%), Positives = 63/177 (35%), Gaps = 44/177 (24%)

Query: 64  PMVPGHEVVGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYND 123
           P VPG EV G V  VG  V    +G +V V                              
Sbjct: 60  PYVPGGEVAGVVDAVGPGVDPAWLGRRV-VAHTGR------------------------- 93

Query: 124 VYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLR 183
                    GG+AE  V D   +  +PDG+ LE A  ++  G T         L  + L 
Sbjct: 94  -------AGGGYAELAVADVDSLHPVPDGLDLEAAVAVVHDGRTALGL-----LDLATLT 141

Query: 184 GGILGL-----GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDA 235
            G + L     GG+G + V +AKA G  V   +    K    +  LGAD  +  +  
Sbjct: 142 PGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAK-TALVRALGADVAVDYTRP 197

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|225041 COG2130, COG2130, Putative NADP-dependent oxidoreductases [General function prediction only]

 Score = 52.3 bits (126), Expect = 1e-07
 Identities = 40/154 (25%), Positives = 62/154 (40%), Gaps = 14/154 (9%)

Query: 134 GFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSG-LRGGILGL--- 189
           G+ E  + D + + K+    A   A  L   G+   +  ++FGL   G  + G   +   
Sbjct: 102 GWQEYAISDGEGLRKLDPSPAPLSAY-LGVLGMPGLT--AYFGLLDIGQPKAGETVVVSA 158

Query: 190 --GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGAD---QYLVSSDATRMQEAA-D 243
             G VG +   IAK  G  V  I+   +K     E LG D    Y     A  ++EA   
Sbjct: 159 AAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELGFDAGIDYKAEDFAQALKEACPK 218

Query: 244 SLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVI 277
            +D   + V     L+  L LL L  ++ + G I
Sbjct: 219 GIDVYFENVGGEV-LDAVLPLLNLFARIPVCGAI 251

Length = 340

>gnl|CDD|130269 TIGR01202, bchC, 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase

 Score = 52.2 bits (125), Expect = 1e-07
 Identities = 62/263 (23%), Positives = 97/263 (36%), Gaps = 45/263 (17%)

Query: 26  TYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDL-----GMSNYPMVPGHEVVGEVKEVGS 80
             TL      D+ +++ Y GI         N L     GM  YP+VPG+E VG V E G 
Sbjct: 17  EVTLTPPSPGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMG-YPLVPGYESVGRVVEAGP 75

Query: 81  EVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMV 140
           +   F+ GD+V V        NC                     Y D +   GG ++ +V
Sbjct: 76  DT-GFRPGDRVFVP-----GSNC---------------------YEDVRGLFGGASKRLV 108

Query: 141 VDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIA 200
                V ++ D     Q A LL    T    ++  G +   L   I+G G +G +   + 
Sbjct: 109 TPASRVCRL-DPALGPQGA-LLALAATARHAVA--GAEVKVLPDLIVGHGTLGRLLARLT 164

Query: 201 KAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEP 260
           KA G     +  ++ +R +     GA  Y V        +       I D       ++ 
Sbjct: 165 KAAGGSPPAVWETNPRRRD-----GATGYEVLDPEK---DPRRDYRAIYDASGDPSLIDT 216

Query: 261 YLSLLKLDGKLILTGVINTPMQF 283
            +  L   G+++L G    P+ F
Sbjct: 217 LVRRLAKGGEIVLAGFYTEPVNF 239

[Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll]. Length = 308

>gnl|CDD|176252 cd08292, ETR_like_2, 2-enoyl thioester reductase (ETR) like proteins, child 2

 Score = 46.6 bits (111), Expect = 9e-06
 Identities = 66/262 (25%), Positives = 101/262 (38%), Gaps = 54/262 (20%)

Query: 33  GAEDVYIKVLYCGICHTDIHQIKNDLGM-SNYPMVPGHEVVGEVKEVGSEVSNFKVGDKV 91
           GA +V ++     I + D+  I+   G     P + G E VG V  VG  V   +VG +V
Sbjct: 27  GAGEVLVRTTLSPIHNHDLWTIRGTYGYKPELPAIGGSEAVGVVDAVGEGVKGLQVGQRV 86

Query: 92  GVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPD 151
            V                                    P  G +AE  V     +V +PD
Sbjct: 87  AVA-----------------------------------PVHGTWAEYFVAPADGLVPLPD 111

Query: 152 GMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGL----GGVGHMGVLIAKAMGHHV 207
           G++ E AA L+   ++    L   G+K     G  L      G VG +  ++A A G +V
Sbjct: 112 GISDEVAAQLIAMPLSALMLLDFLGVKP----GQWLIQNAAGGAVGKLVAMLAAARGINV 167

Query: 208 TVISSSDKKRVEAMEHLGADQYLVSSD----ATRMQEAA--DSLDYIIDTVPANHPLEPY 261
             +   D   V  +  LG    +VS++      +++EAA    +   +D+V         
Sbjct: 168 INLVRRDAG-VAELRALG-IGPVVSTEQPGWQDKVREAAGGAPISVALDSV-GGKLAGEL 224

Query: 262 LSLLKLDGKLILTGVI-NTPMQ 282
           LSLL   G L+  G +   PMQ
Sbjct: 225 LSLLGEGGTLVSFGSMSGEPMQ 246

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|182701 PRK10754, PRK10754, quinone oxidoreductase, NADPH-dependent; Provisional

 Score = 41.3 bits (97), Expect = 4e-04
 Identities = 40/165 (24%), Positives = 63/165 (38%), Gaps = 46/165 (27%)

Query: 68  GHEVVGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTD 127
           G E  G V +VGS V + KVGD+V                                VY  
Sbjct: 62  GTEAAGVVSKVGSGVKHIKVGDRV--------------------------------VY-- 87

Query: 128 GKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQS-GLRGGI 186
            +   G ++    V       +PD ++ EQAA     G+TV     ++ L+++  ++   
Sbjct: 88  AQSALGAYSSVHNVPADKAAILPDAISFEQAAASFLKGLTV-----YYLLRKTYEIKPDE 142

Query: 187 LGL-----GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGA 226
             L     GGVG +    AKA+G  +     S +K  +  +  GA
Sbjct: 143 QFLFHAAAGGVGLIACQWAKALGAKLIGTVGSAQK-AQRAKKAGA 186

Length = 327

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	357
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	100.0
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	100.0
PLN02586	360	probable cinnamyl alcohol dehydrogenase	100.0
KOG0024	354	consensus Sorbitol dehydrogenase [Secondary metabo	100.0
COG1062	366	AdhC Zn-dependent alcohol dehydrogenases, class II	100.0
PLN02514	357	cinnamyl-alcohol dehydrogenase	100.0
PLN02178	375	cinnamyl-alcohol dehydrogenase	100.0
KOG0022	375	consensus Alcohol dehydrogenase, class III [Second	100.0
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	100.0
TIGR02822	329	adh_fam_2 zinc-binding alcohol dehydrogenase famil	100.0
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	100.0
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	100.0
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	100.0
PLN02740	381	Alcohol dehydrogenase-like	100.0
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	100.0
PLN02827	378	Alcohol dehydrogenase-like	100.0
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	100.0
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	100.0
cd08277	365	liver_alcohol_DH_like Liver alcohol dehydrogenase.	100.0
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	100.0
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	100.0
COG1063	350	Tdh Threonine dehydrogenase and related Zn-depende	100.0
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	100.0
cd08296	333	CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci	100.0
KOG1197	336	consensus Predicted quinone oxidoreductase [Energy	100.0
TIGR02819	393	fdhA_non_GSH formaldehyde dehydrogenase, glutathio	100.0
PRK10309	347	galactitol-1-phosphate dehydrogenase; Provisional	100.0
cd05283	337	CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnam	100.0
cd08237	341	ribitol-5-phosphate_DH ribitol-5-phosphate dehydro	100.0
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	100.0
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	100.0
cd05284	340	arabinose_DH_like D-arabinose dehydrogenase. This	100.0
TIGR01202	308	bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyl	100.0
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	100.0
PRK10083	339	putative oxidoreductase; Provisional	100.0
cd08299	373	alcohol_DH_class_I_II_IV class I, II, IV alcohol d	100.0
PRK09422	338	ethanol-active dehydrogenase/acetaldehyde-active r	100.0
cd08278	365	benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Be	100.0
cd08240	350	6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehy	100.0
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	100.0
cd08285	351	NADP_ADH NADP(H)-dependent alcohol dehydrogenases.	100.0
cd08283	386	FDH_like_1 Glutathione-dependent formaldehyde dehy	100.0
PRK13771	334	putative alcohol dehydrogenase; Provisional	100.0
cd08260	345	Zn_ADH6 Alcohol dehydrogenases of the MDR family.	100.0
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	100.0
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	100.0
cd08279	363	Zn_ADH_class_III Class III alcohol dehydrogenase.	100.0
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	100.0
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	100.0
cd05279	365	Zn_ADH1 Liver alcohol dehydrogenase and related zi	100.0
cd05278	347	FDH_like Formaldehyde dehydrogenases. Formaldehyde	100.0
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	100.0
cd08298	329	CAD2 Cinnamyl alcohol dehydrogenases (CAD). These	100.0
cd08254	338	hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carbo	100.0
cd08261	337	Zn_ADH7 Alcohol dehydrogenases of the MDR family.	100.0
cd08245	330	CAD Cinnamyl alcohol dehydrogenases (CAD) and rela	100.0
cd08263	367	Zn_ADH10 Alcohol dehydrogenases of the MDR family.	100.0
cd08282	375	PFDH_like Pseudomonas putida aldehyde-dismutating	100.0
cd08256	350	Zn_ADH2 Alcohol dehydrogenases of the MDR family.	100.0
cd08286	345	FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-lik	100.0
PRK05396	341	tdh L-threonine 3-dehydrogenase; Validated	100.0
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	100.0
cd08235	343	iditol_2_DH_like L-iditol 2-dehydrogenase. Putativ	100.0
cd08264	325	Zn_ADH_like2 Alcohol dehydrogenases of the MDR fam	100.0
cd08284	344	FDH_like_2 Glutathione-dependent formaldehyde dehy	100.0
cd08287	345	FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-lik	100.0
cd08242	319	MDR_like Medium chain dehydrogenases/reductase (MD	100.0
cd08262	341	Zn_ADH8 Alcohol dehydrogenases of the MDR family.	100.0
KOG0025	354	consensus Zn2+-binding dehydrogenase (nuclear rece	100.0
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	100.0
cd05285	343	sorbitol_DH Sorbitol dehydrogenase. Sorbitol and a	100.0
PLN02702	364	L-idonate 5-dehydrogenase	100.0
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	100.0
cd08232	339	idonate-5-DH L-idonate 5-dehydrogenase. L-idonate	100.0
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	100.0
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	100.0
cd08274	350	MDR9 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08265	384	Zn_ADH3 Alcohol dehydrogenases of the MDR family.	100.0
cd08236	343	sugar_DH NAD(P)-dependent sugar dehydrogenases. Th	100.0
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	100.0
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	100.0
cd05281	341	TDH Threonine dehydrogenase. L-threonine dehydroge	100.0
cd08234	334	threonine_DH_like L-threonine dehydrogenase. L-thr	100.0
TIGR02817	336	adh_fam_1 zinc-binding alcohol dehydrogenase famil	100.0
TIGR00692	340	tdh L-threonine 3-dehydrogenase. E. coli His-90 mo	100.0
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	100.0
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	100.0
cd08258	306	Zn_ADH4 Alcohol dehydrogenases of the MDR family.	100.0
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	100.0
cd08276	336	MDR7 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd05280	325	MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone	100.0
cd08270	305	MDR4 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	100.0
PRK10754	327	quinone oxidoreductase, NADPH-dependent; Provision	100.0
PTZ00354	334	alcohol dehydrogenase; Provisional	100.0
TIGR02823	323	oxido_YhdH putative quinone oxidoreductase, YhdH/Y	100.0
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	100.0
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	100.0
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	100.0
cd08249	339	enoyl_reductase_like enoyl_reductase_like. Member	100.0
cd08252	336	AL_MDR Arginate lyase and other MDR family members	100.0
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	100.0
cd08269	312	Zn_ADH9 Alcohol dehydrogenases of the MDR family.	100.0
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	100.0
COG2130	340	Putative NADP-dependent oxidoreductases [General f	100.0
cd08288	324	MDR_yhdh Yhdh putative quinone oxidoreductases. Yh	100.0
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	100.0
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	100.0
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	100.0
cd08273	331	MDR8 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08247	352	AST1_like AST1 is a cytoplasmic protein associated	100.0
cd08272	326	MDR6 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	100.0
cd08271	325	MDR5 Medium chain dehydrogenases/reductase (MDR)/z	100.0
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	100.0
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd05289	309	MDR_like_2 alcohol dehydrogenase and quinone reduc	100.0
cd08267	319	MDR1 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08251	303	polyketide_synthase polyketide synthase. Polyketid	100.0
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	100.0
cd08275	337	MDR3 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd05195	293	enoyl_red enoyl reductase of polyketide synthase.	99.98
smart00829	288	PKS_ER Enoylreductase. Enoylreductase in Polyketid	99.97
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	99.96
cd08255	277	2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_	99.96
KOG1196	343	consensus Predicted NAD-dependent oxidoreductase [	99.94
PF08240	109	ADH_N: Alcohol dehydrogenase GroES-like domain; In	99.9
PF00107	130	ADH_zinc_N: Zinc-binding dehydrogenase; InterPro:	99.71
PF13602	127	ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQ	99.52
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	99.47
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	99.34
PRK11873	272	arsM arsenite S-adenosylmethyltransferase; Reviewe	98.64
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	98.62
PRK08306	296	dipicolinate synthase subunit A; Reviewed	98.58
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	98.53
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	98.44
PLN02494	477	adenosylhomocysteinase	98.38
TIGR00936	406	ahcY adenosylhomocysteinase. This enzyme hydrolyze	98.3
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	98.23
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	98.17
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	98.09
PTZ00075	476	Adenosylhomocysteinase; Provisional	98.09
PRK12771	564	putative glutamate synthase (NADPH) small subunit;	98.09
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	98.06
PRK08324	681	short chain dehydrogenase; Validated	97.98
PRK00517	250	prmA ribosomal protein L11 methyltransferase; Revi	97.93
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	97.91
COG0300	265	DltE Short-chain dehydrogenases of various substra	97.74
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	97.72
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	97.66
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	97.63
COG2518	209	Pcm Protein-L-isoaspartate carboxylmethyltransfera	97.62
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	97.6
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.56
PRK12742	237	oxidoreductase; Provisional	97.53
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	97.49
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	97.47
COG0686	371	Ald Alanine dehydrogenase [Amino acid transport an	97.46
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	97.42
PRK00377	198	cbiT cobalt-precorrin-6Y C(15)-methyltransferase;	97.35
PRK06182	273	short chain dehydrogenase; Validated	97.33
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.3
PRK05993	277	short chain dehydrogenase; Provisional	97.3
PF12847	112	Methyltransf_18: Methyltransferase domain; PDB: 3G	97.28
PLN03209	576	translocon at the inner envelope of chloroplast su	97.28
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	97.27
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	97.26
PRK08265	261	short chain dehydrogenase; Provisional	97.25
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	97.24
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	97.22
PRK05872	296	short chain dehydrogenase; Provisional	97.21
PRK12548	289	shikimate 5-dehydrogenase; Provisional	97.19
PRK06139	330	short chain dehydrogenase; Provisional	97.16
PRK05693	274	short chain dehydrogenase; Provisional	97.13
PRK07109	334	short chain dehydrogenase; Provisional	97.12
PF01262	168	AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal	97.11
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	97.11
PRK07060	245	short chain dehydrogenase; Provisional	97.1
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	97.09
COG2242	187	CobL Precorrin-6B methylase 2 [Coenzyme metabolism	97.09
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.08
PRK12939	250	short chain dehydrogenase; Provisional	97.06
PF11017	314	DUF2855: Protein of unknown function (DUF2855); In	97.04
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	97.03
TIGR00406	288	prmA ribosomal protein L11 methyltransferase. Ribo	97.03
PF01135	209	PCMT: Protein-L-isoaspartate(D-aspartate) O-methyl	97.02
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	97.01
PRK13940	414	glutamyl-tRNA reductase; Provisional	97.01
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	97.0
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	97.0
PRK06057	255	short chain dehydrogenase; Provisional	97.0
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	96.98
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.98
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	96.97
PRK06484	520	short chain dehydrogenase; Validated	96.97
PRK12367	245	short chain dehydrogenase; Provisional	96.96
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	96.94
PRK12829	264	short chain dehydrogenase; Provisional	96.94
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	96.91
PRK05866	293	short chain dehydrogenase; Provisional	96.89
PRK06500	249	short chain dehydrogenase; Provisional	96.89
PRK08618	325	ornithine cyclodeaminase; Validated	96.88
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	96.87
PRK07806	248	short chain dehydrogenase; Provisional	96.86
PRK07825	273	short chain dehydrogenase; Provisional	96.85
PLN00203	519	glutamyl-tRNA reductase	96.84
PRK06196	315	oxidoreductase; Provisional	96.81
PRK07814	263	short chain dehydrogenase; Provisional	96.8
PRK03369	488	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.8
PRK08339	263	short chain dehydrogenase; Provisional	96.79
PRK07063	260	short chain dehydrogenase; Provisional	96.78
TIGR02469	124	CbiT precorrin-6Y C5,15-methyltransferase (decarbo	96.78
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	96.76
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	96.76
PRK07062	265	short chain dehydrogenase; Provisional	96.76
PRK09291	257	short chain dehydrogenase; Provisional	96.75
PRK05854	313	short chain dehydrogenase; Provisional	96.73
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	96.73
TIGR02992	326	ectoine_eutC ectoine utilization protein EutC. Mem	96.73
PRK05867	253	short chain dehydrogenase; Provisional	96.73
PRK07831	262	short chain dehydrogenase; Provisional	96.72
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.71
PRK07576	264	short chain dehydrogenase; Provisional	96.7
PRK12809	639	putative oxidoreductase Fe-S binding subunit; Revi	96.69
PRK07832	272	short chain dehydrogenase; Provisional	96.69
PRK13943	322	protein-L-isoaspartate O-methyltransferase; Provis	96.69
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	96.68
PRK05717	255	oxidoreductase; Validated	96.68
PRK06180	277	short chain dehydrogenase; Provisional	96.67
PRK07523	255	gluconate 5-dehydrogenase; Provisional	96.66
PRK06949	258	short chain dehydrogenase; Provisional	96.65
PRK07340	304	ornithine cyclodeaminase; Validated	96.65
PRK07453	322	protochlorophyllide oxidoreductase; Validated	96.65
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.64
PRK05876	275	short chain dehydrogenase; Provisional	96.64
PRK06194	287	hypothetical protein; Provisional	96.64
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	96.63
PRK07478	254	short chain dehydrogenase; Provisional	96.63
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	96.63
PRK11705	383	cyclopropane fatty acyl phospholipid synthase; Pro	96.62
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.62
PRK07326	237	short chain dehydrogenase; Provisional	96.62
PRK08263	275	short chain dehydrogenase; Provisional	96.61
PLN02253	280	xanthoxin dehydrogenase	96.6
PRK06484	520	short chain dehydrogenase; Validated	96.6
CHL00194	317	ycf39 Ycf39; Provisional	96.59
PRK07890	258	short chain dehydrogenase; Provisional	96.59
PRK06719	157	precorrin-2 dehydrogenase; Validated	96.59
PRK09186	256	flagellin modification protein A; Provisional	96.57
PRK09242	257	tropinone reductase; Provisional	96.57
PRK12828	239	short chain dehydrogenase; Provisional	96.56
PRK06141	314	ornithine cyclodeaminase; Validated	96.55
PRK06128	300	oxidoreductase; Provisional	96.54
PRK05884	223	short chain dehydrogenase; Provisional	96.54
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	96.54
PRK07677	252	short chain dehydrogenase; Provisional	96.53
PRK13944	205	protein-L-isoaspartate O-methyltransferase; Provis	96.52
PRK06841	255	short chain dehydrogenase; Provisional	96.5
COG1648	210	CysG Siroheme synthase (precorrin-2 oxidase/ferroc	96.5
PRK13942	212	protein-L-isoaspartate O-methyltransferase; Provis	96.49
PRK07024	257	short chain dehydrogenase; Provisional	96.48
PRK06483	236	dihydromonapterin reductase; Provisional	96.48
PRK04457	262	spermidine synthase; Provisional	96.46
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	96.45
PRK07774	250	short chain dehydrogenase; Provisional	96.44
PF02353	273	CMAS: Mycolic acid cyclopropane synthetase; InterP	96.43
PRK07502	307	cyclohexadienyl dehydrogenase; Validated	96.43
PRK08589	272	short chain dehydrogenase; Validated	96.43
PRK08177	225	short chain dehydrogenase; Provisional	96.42
COG3288	356	PntA NAD/NADP transhydrogenase alpha subunit [Ener	96.42
TIGR01318	467	gltD_gamma_fam glutamate synthase small subunit fa	96.42
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	96.42
PRK08267	260	short chain dehydrogenase; Provisional	96.41
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	96.4
PRK06138	252	short chain dehydrogenase; Provisional	96.4
PRK06125	259	short chain dehydrogenase; Provisional	96.4
PRK08017	256	oxidoreductase; Provisional	96.39
PRK08643	256	acetoin reductase; Validated	96.37
PRK08340	259	glucose-1-dehydrogenase; Provisional	96.36
PRK05875	276	short chain dehydrogenase; Provisional	96.35
PRK09072	263	short chain dehydrogenase; Provisional	96.35
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	96.33
PRK10258	251	biotin biosynthesis protein BioC; Provisional	96.31
PRK06197	306	short chain dehydrogenase; Provisional	96.31
PRK07067	257	sorbitol dehydrogenase; Provisional	96.3
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.3
PRK06482	276	short chain dehydrogenase; Provisional	96.3
PRK07035	252	short chain dehydrogenase; Provisional	96.26
PRK06181	263	short chain dehydrogenase; Provisional	96.25
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	96.25
PRK10538	248	malonic semialdehyde reductase; Provisional	96.25
PRK14191	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.25
PRK08213	259	gluconate 5-dehydrogenase; Provisional	96.24
PRK08085	254	gluconate 5-dehydrogenase; Provisional	96.24
PRK10792	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.24
PLN02780	320	ketoreductase/ oxidoreductase	96.23
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	96.22
PRK14189	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.19
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.19
PRK06172	253	short chain dehydrogenase; Provisional	96.19
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	96.18
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	96.18
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	96.17
KOG0725	270	consensus Reductases with broad range of substrate	96.17
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	96.17
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	96.17
PRK06720	169	hypothetical protein; Provisional	96.16
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	96.16
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	96.16
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	96.15
COG2230	283	Cfa Cyclopropane fatty acid synthase and related m	96.14
PRK08862	227	short chain dehydrogenase; Provisional	96.12
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	96.11
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.11
PRK08251	248	short chain dehydrogenase; Provisional	96.1
PRK07574	385	formate dehydrogenase; Provisional	96.09
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	96.08
PRK07985	294	oxidoreductase; Provisional	96.08
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	96.08
PRK06198	260	short chain dehydrogenase; Provisional	96.07
PRK07904	253	short chain dehydrogenase; Provisional	96.06
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	96.06
PRK08277	278	D-mannonate oxidoreductase; Provisional	96.05
PRK05562	223	precorrin-2 dehydrogenase; Provisional	96.05
PRK12747	252	short chain dehydrogenase; Provisional	96.04
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	96.04
TIGR00080	215	pimt protein-L-isoaspartate(D-aspartate) O-methylt	96.04
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	96.03
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	96.03
PLN02366	308	spermidine synthase	96.03
PRK14982	340	acyl-ACP reductase; Provisional	96.02
PRK00811	283	spermidine synthase; Provisional	96.0
PRK08291	330	ectoine utilization protein EutC; Validated	96.0
PRK07454	241	short chain dehydrogenase; Provisional	96.0
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	95.99
PRK07097	265	gluconate 5-dehydrogenase; Provisional	95.99
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	95.98
PRK06124	256	gluconate 5-dehydrogenase; Provisional	95.97
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	95.97
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	95.97
TIGR03840	213	TMPT_Se_Te thiopurine S-methyltransferase, Se/Te d	95.97
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.96
PRK06940	275	short chain dehydrogenase; Provisional	95.96
PRK06914	280	short chain dehydrogenase; Provisional	95.96
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	95.96
COG2423	330	Predicted ornithine cyclodeaminase, mu-crystallin	95.96
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.96
PRK12937	245	short chain dehydrogenase; Provisional	95.95
PRK06101	240	short chain dehydrogenase; Provisional	95.93
PRK07074	257	short chain dehydrogenase; Provisional	95.93
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	95.93
PLN02928	347	oxidoreductase family protein	95.92
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	95.92
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	95.9
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	95.89
PRK08703	239	short chain dehydrogenase; Provisional	95.88
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	95.87
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	95.87
KOG1208	314	consensus Dehydrogenases with different specificit	95.86
PRK06701	290	short chain dehydrogenase; Provisional	95.86
PRK06179	270	short chain dehydrogenase; Provisional	95.86
PRK07066	321	3-hydroxybutyryl-CoA dehydrogenase; Validated	95.86
COG2264	300	PrmA Ribosomal protein L11 methylase [Translation,	95.85
PLN02896	353	cinnamyl-alcohol dehydrogenase	95.84
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	95.83
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	95.83
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	95.82
PRK07791	286	short chain dehydrogenase; Provisional	95.82
COG2227	243	UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-	95.81
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	95.81
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	95.78
PRK06114	254	short chain dehydrogenase; Provisional	95.78
PLN03139	386	formate dehydrogenase; Provisional	95.77
PRK06823	315	ornithine cyclodeaminase; Validated	95.77
TIGR01532	325	E4PD_g-proteo D-erythrose-4-phosphate dehydrogenas	95.76
PLN03075	296	nicotianamine synthase; Provisional	95.76
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.76
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	95.75
PRK08628	258	short chain dehydrogenase; Provisional	95.75
PRK13243	333	glyoxylate reductase; Reviewed	95.74
PRK07775	274	short chain dehydrogenase; Provisional	95.74
PRK12769	654	putative oxidoreductase Fe-S binding subunit; Revi	95.74
PRK06953	222	short chain dehydrogenase; Provisional	95.72
PRK08226	263	short chain dehydrogenase; Provisional	95.71
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	95.71
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	95.69
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	95.69
PRK09135	249	pteridine reductase; Provisional	95.68
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	95.67
PRK08303	305	short chain dehydrogenase; Provisional	95.67
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	95.67
PRK05650	270	short chain dehydrogenase; Provisional	95.66
PRK08264	238	short chain dehydrogenase; Validated	95.66
COG1052	324	LdhA Lactate dehydrogenase and related dehydrogena	95.66
COG0334	411	GdhA Glutamate dehydrogenase/leucine dehydrogenase	95.66
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	95.66
TIGR00417	270	speE spermidine synthase. the SpeE subunit of sper	95.65
PRK06398	258	aldose dehydrogenase; Validated	95.65
PRK14618	328	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	95.63
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.62
PRK14176	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.61
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	95.57
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	95.57
PRK07069	251	short chain dehydrogenase; Validated	95.55
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	95.54
COG2910	211	Putative NADH-flavin reductase [General function p	95.53
PLN02686	367	cinnamoyl-CoA reductase	95.53
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	95.53
PRK00107	187	gidB 16S rRNA methyltransferase GidB; Reviewed	95.52
PRK07856	252	short chain dehydrogenase; Provisional	95.51
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	95.51
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	95.51
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	95.49
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	95.49
PRK14178	279	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.47
PRK01581	374	speE spermidine synthase; Validated	95.47
PRK08278	273	short chain dehydrogenase; Provisional	95.47
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	95.44
PRK05599	246	hypothetical protein; Provisional	95.42
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	95.4
TIGR02415	254	23BDH acetoin reductases. One member of this famil	95.4
COG2226	238	UbiE Methylase involved in ubiquinone/menaquinone	95.39
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	95.38
PRK12743	256	oxidoreductase; Provisional	95.38
PRK09134	258	short chain dehydrogenase; Provisional	95.37
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.36
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.35
PRK08219	227	short chain dehydrogenase; Provisional	95.34
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.34
PLN02650	351	dihydroflavonol-4-reductase	95.34
PRK10637	457	cysG siroheme synthase; Provisional	95.33
PRK07102	243	short chain dehydrogenase; Provisional	95.32
PRK12480	330	D-lactate dehydrogenase; Provisional	95.3
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	95.3
PF01210	157	NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate	95.3
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	95.3
PLN02214	342	cinnamoyl-CoA reductase	95.3
PF02558	151	ApbA: Ketopantoate reductase PanE/ApbA; InterPro:	95.29
PRK04148	134	hypothetical protein; Provisional	95.29
COG0421	282	SpeE Spermidine synthase [Amino acid transport and	95.28
COG0569	225	TrkA K+ transport systems, NAD-binding component [	95.28
PRK06523	260	short chain dehydrogenase; Provisional	95.26
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	95.25
PF06325	295	PrmA: Ribosomal protein L11 methyltransferase (Prm	95.25
PLN02427	386	UDP-apiose/xylose synthase	95.24
PLN02695	370	GDP-D-mannose-3',5'-epimerase	95.23
PRK12746	254	short chain dehydrogenase; Provisional	95.23
PRK06035	291	3-hydroxyacyl-CoA dehydrogenase; Validated	95.21
PRK12938	246	acetyacetyl-CoA reductase; Provisional	95.21
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.2
PRK07577	234	short chain dehydrogenase; Provisional	95.19
TIGR02371	325	ala_DH_arch alanine dehydrogenase, Archaeoglobus f	95.18
PRK05855	582	short chain dehydrogenase; Validated	95.18
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	95.17
PRK08317	241	hypothetical protein; Provisional	95.16
PRK08300	302	acetaldehyde dehydrogenase; Validated	95.15
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	95.15
PRK08309	177	short chain dehydrogenase; Provisional	95.15
PRK13255	218	thiopurine S-methyltransferase; Reviewed	95.11
PRK08936	261	glucose-1-dehydrogenase; Provisional	95.11
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	95.1
PRK14179	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.1
PRK13403	335	ketol-acid reductoisomerase; Provisional	95.09
KOG1252	362	consensus Cystathionine beta-synthase and related	95.08
PRK07402	196	precorrin-6B methylase; Provisional	95.04
PRK06522	304	2-dehydropantoate 2-reductase; Reviewed	95.04
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	95.0
PRK05447	385	1-deoxy-D-xylulose 5-phosphate reductoisomerase; P	95.0
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	95.0
PRK14967	223	putative methyltransferase; Provisional	94.99
PRK00141	473	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	94.99
PRK06046	326	alanine dehydrogenase; Validated	94.98
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.97
PLN02823	336	spermine synthase	94.93
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	94.91
PLN00198	338	anthocyanidin reductase; Provisional	94.91
PRK07578	199	short chain dehydrogenase; Provisional	94.9
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.9
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	94.86
PRK07201	657	short chain dehydrogenase; Provisional	94.86
PRK00536	262	speE spermidine synthase; Provisional	94.84
PRK03562	621	glutathione-regulated potassium-efflux system prot	94.82
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	94.81
PTZ00098	263	phosphoethanolamine N-methyltransferase; Provision	94.79
PLN00015	308	protochlorophyllide reductase	94.77
smart00846	149	Gp_dh_N Glyceraldehyde 3-phosphate dehydrogenase,	94.72
cd05211	217	NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of	94.7
COG1179	263	Dinucleotide-utilizing enzymes involved in molybdo	94.69
KOG2733	423	consensus Uncharacterized membrane protein [Functi	94.69
PRK14172	278	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.68
PRK12921	305	2-dehydropantoate 2-reductase; Provisional	94.68
COG0027	394	PurT Formate-dependent phosphoribosylglycinamide f	94.67
PF02670	129	DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate re	94.67
PRK14177	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.65
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	94.65
TIGR00438	188	rrmJ cell division protein FtsJ.	94.65
cd01079	197	NAD_bind_m-THF_DH NAD binding domain of methylene-	94.65
PRK08410	311	2-hydroxyacid dehydrogenase; Provisional	94.64
PRK06436	303	glycerate dehydrogenase; Provisional	94.63
PRK14190	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.63

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=100.00  E-value=9.9e-68  Score=469.75  Aligned_cols=335  Identities=40%  Similarity=0.659  Sum_probs=312.4

Q ss_pred             hhheeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCC
Q 018382            7 ERATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFK   86 (357)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~   86 (357)
                      +++|+++......+++++.|++.|+|+++||+|+++|+|+|++|++.++|.++...+|+++|||.+|+|+++|++|++|+
T Consensus         1 ~~~mkA~~~~~~~~pl~i~e~~~p~p~~~eVlI~v~~~GVChsDlH~~~G~~~~~~~P~ipGHEivG~V~~vG~~V~~~k   80 (339)
T COG1064           1 MMTMKAAVLKKFGQPLEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPVPKLPLIPGHEIVGTVVEVGEGVTGLK   80 (339)
T ss_pred             CcceEEEEEccCCCCceEEeccCCCCCCCeEEEEEEEEeecchhhhhhcCCCCCCCCCccCCcceEEEEEEecCCCccCC
Confidence            46788888877777799999999999999999999999999999999999999888999999999999999999999999


Q ss_pred             CCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhh
Q 018382           87 VGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGV  166 (357)
Q Consensus        87 ~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~  166 (357)
                      +||||.+..+..+||+|++|++|..|.|+.....       |++.+|+|+||+++++.+++++|+++++++||.+.|++.
T Consensus        81 ~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~~-------gy~~~GGyaeyv~v~~~~~~~iP~~~d~~~aApllCaGi  153 (339)
T COG1064          81 VGDRVGVGWLVISCGECEYCRSGNENLCPNQKIT-------GYTTDGGYAEYVVVPARYVVKIPEGLDLAEAAPLLCAGI  153 (339)
T ss_pred             CCCEEEecCccCCCCCCccccCcccccCCCcccc-------ceeecCcceeEEEEchHHeEECCCCCChhhhhhhhcCee
Confidence            9999988677888999999999999999987655       445899999999999999999999999999999999999


Q ss_pred             hhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCcc
Q 018382          167 TVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLD  246 (357)
Q Consensus       167 ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d  246 (357)
                      |.|++|++... +||++|+|.|.|++|.+++|+|+++|++|+++++++++.+.+++ +|++++++.++++..+.+.+.+|
T Consensus       154 T~y~alk~~~~-~pG~~V~I~G~GGlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~-lGAd~~i~~~~~~~~~~~~~~~d  231 (339)
T COG1064         154 TTYRALKKANV-KPGKWVAVVGAGGLGHMAVQYAKAMGAEVIAITRSEEKLELAKK-LGADHVINSSDSDALEAVKEIAD  231 (339)
T ss_pred             eEeeehhhcCC-CCCCEEEEECCcHHHHHHHHHHHHcCCeEEEEeCChHHHHHHHH-hCCcEEEEcCCchhhHHhHhhCc
Confidence            99999999665 99999999999999999999999999999999999999999999 99999999887777777777799


Q ss_pred             EEEEcCCCCCChHHHHhccccCCeEEEEccCC-CC-cccchHHHhhccceEEEEeecCHHHHHHHHHHHHhcCCCccE-E
Q 018382          247 YIIDTVPANHPLEPYLSLLKLDGKLILTGVIN-TP-MQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMI-E  323 (357)
Q Consensus       247 ~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~-~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~~i-~  323 (357)
                      +++|+++ ...++.+++.|+++|+++.+|... .. ..++...++.+++++.|+..+++.++++++++..++.+++.+ +
T Consensus       232 ~ii~tv~-~~~~~~~l~~l~~~G~~v~vG~~~~~~~~~~~~~~li~~~~~i~GS~~g~~~d~~e~l~f~~~g~Ikp~i~e  310 (339)
T COG1064         232 AIIDTVG-PATLEPSLKALRRGGTLVLVGLPGGGPIPLLPAFLLILKEISIVGSLVGTRADLEEALDFAAEGKIKPEILE  310 (339)
T ss_pred             EEEECCC-hhhHHHHHHHHhcCCEEEEECCCCCcccCCCCHHHhhhcCeEEEEEecCCHHHHHHHHHHHHhCCceeeEEe
Confidence            9999999 659999999999999999999984 33 447778889999999999999999999999999999999999 7


Q ss_pred             EeecccHHHHHHHHHcCCccEEEEEecC
Q 018382          324 VIKMDYVNKAFERLEKNDVRYRFVVDVA  351 (357)
Q Consensus       324 ~~~~~~~~~a~~~~~~~~~~Gkvvi~~~  351 (357)
                      .++++|+++||+.|++++..||+||++.
T Consensus       311 ~~~l~~in~A~~~m~~g~v~gR~Vi~~~  338 (339)
T COG1064         311 TIPLDEINEAYERMEKGKVRGRAVIDMS  338 (339)
T ss_pred             eECHHHHHHHHHHHHcCCeeeEEEecCC
Confidence            9999999999999999999999999874

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=3.1e-64  Score=432.44  Aligned_cols=353  Identities=51%  Similarity=0.888  Sum_probs=332.7

Q ss_pred             CCCchhhhheeeehccCCCC--CcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEe
Q 018382            1 MGSLDTERATIGWAAKDPSG--ILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEV   78 (357)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~v   78 (357)
                      |+++..|.++.+|.+++..+  ++++.++++|+|+++||+|+++++|+|++|++.+.|.++..++|.++|||.+|+|+++
T Consensus         1 ~~~~~~p~k~~g~~~~~~~G~l~p~~~~~~~~~~g~~dv~vkI~~cGIChsDlH~~~gdwg~s~~PlV~GHEiaG~Vvkv   80 (360)
T KOG0023|consen    1 MSSMSIPEKQFGWAARDPSGVLSPEVFSFPVREPGENDVLVKIEYCGVCHSDLHAWKGDWGLSKYPLVPGHEIAGVVVKV   80 (360)
T ss_pred             CCcccCchhhEEEEEECCCCCCCcceeEcCCCCCCCCcEEEEEEEEeccchhHHHhhccCCcccCCccCCceeeEEEEEE
Confidence            67788999999999988888  5666999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCcccc
Q 018382           79 GSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQA  158 (357)
Q Consensus        79 G~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~a  158 (357)
                      |++|++|++||||-+-....+|++|++|..+..+.|++.-+.+++.+.||..++|+|++|+++++..++++|+++++++|
T Consensus        81 Gs~V~~~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t~~g~~~DGt~~~ggf~~~~~v~~~~a~kIP~~~pl~~a  160 (360)
T KOG0023|consen   81 GSNVTGFKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKMHFTYNGVYHDGTITQGGFQEYAVVDEVFAIKIPENLPLASA  160 (360)
T ss_pred             CCCcccccccCeeeeeEEeccccCccccccCCcccCCceeEeccccccCCCCccCccceeEEEeeeeEEECCCCCChhhc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccchhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCC-ChhH
Q 018382          159 APLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSS-DATR  237 (357)
Q Consensus       159 a~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~-~~~~  237 (357)
                      |.+.|+..|+|.+|...+. .||++|-|.|+|++|.+++|+||++|.+|+++++++.+++++.+++|++..++.. ++++
T Consensus       161 APlLCaGITvYspLk~~g~-~pG~~vgI~GlGGLGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LGAd~fv~~~~d~d~  239 (360)
T KOG0023|consen  161 APLLCAGITVYSPLKRSGL-GPGKWVGIVGLGGLGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLGADVFVDSTEDPDI  239 (360)
T ss_pred             cchhhcceEEeehhHHcCC-CCCcEEEEecCcccchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcCcceeEEecCCHHH
Confidence            9999999999999998887 7999999999977999999999999999999999998888888889999999888 7888


Q ss_pred             HHHhhCCccEEEEcCC--CCCChHHHHhccccCCeEEEEccCCCCcccchHHHhhccceEEEEeecCHHHHHHHHHHHHh
Q 018382          238 MQEAADSLDYIIDTVP--ANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCRE  315 (357)
Q Consensus       238 ~~~~~~~~d~v~d~~g--~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~  315 (357)
                      ++++.+-.|.+++++.  ....++.+++.|+++|++|++|.+.....++.+.+..+.+++.|+..+.+.+.+++++++.+
T Consensus       240 ~~~~~~~~dg~~~~v~~~a~~~~~~~~~~lk~~Gt~V~vg~p~~~~~~~~~~lil~~~~I~GS~vG~~ket~E~Ldf~a~  319 (360)
T KOG0023|consen  240 MKAIMKTTDGGIDTVSNLAEHALEPLLGLLKVNGTLVLVGLPEKPLKLDTFPLILGRKSIKGSIVGSRKETQEALDFVAR  319 (360)
T ss_pred             HHHHHHhhcCcceeeeeccccchHHHHHHhhcCCEEEEEeCcCCcccccchhhhcccEEEEeeccccHHHHHHHHHHHHc
Confidence            8888876677777666  55578999999999999999999988888889999999999999999999999999999999


Q ss_pred             cCCCccEEEeecccHHHHHHHHHcCCccEEEEEecCCCc
Q 018382          316 KGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGSK  354 (357)
Q Consensus       316 ~~l~~~i~~~~~~~~~~a~~~~~~~~~~Gkvvi~~~~~~  354 (357)
                      +.++..|+..+++++++||++|++++..+|.|+++..+.
T Consensus       320 ~~ik~~IE~v~~~~v~~a~erm~kgdV~yRfVvD~s~~~  358 (360)
T KOG0023|consen  320 GLIKSPIELVKLSEVNEAYERMEKGDVRYRFVVDVSKSL  358 (360)
T ss_pred             CCCcCceEEEehhHHHHHHHHHHhcCeeEEEEEEccccc
Confidence            999999999999999999999999999999999997653

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=100.00  E-value=1.2e-55  Score=410.82  Aligned_cols=347  Identities=52%  Similarity=0.985  Sum_probs=301.1

Q ss_pred             hhhheeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCC
Q 018382            6 TERATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNF   85 (357)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~   85 (357)
                      -|+|+++|...+.++.++..+++.|+|+++||+||+.++++|++|++++.|.++...+|.++|||++|+|+++|+++++|
T Consensus         9 ~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~p~i~GhE~~G~V~~vG~~v~~~   88 (360)
T PLN02586          9 HPQKAFGWAARDPSGVLSPFHFSRRENGDEDVTVKILYCGVCHSDLHTIKNEWGFTRYPIVPGHEIVGIVTKLGKNVKKF   88 (360)
T ss_pred             chhheeEEEecCCCCCceEEeecCCCCCCCeEEEEEEEecCChhhHhhhcCCcCCCCCCccCCcceeEEEEEECCCCCcc
Confidence            58999999998878889999999999999999999999999999999998876544678999999999999999999999


Q ss_pred             CCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchh
Q 018382           86 KVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAG  165 (357)
Q Consensus        86 ~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~  165 (357)
                      ++||||++.+....||.|.+|+.|.++.|+...+.+.....+|...+|+|+||++++++.++++|++++++++|++++.+
T Consensus        89 ~vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~~  168 (360)
T PLN02586         89 KEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTKNYGGYSDMIVVDQHFVLRFPDNLPLDAGAPLLCAG  168 (360)
T ss_pred             CCCCEEEEccccCcCCCCccccCCCcccCCCccccccccccCCCcCCCccceEEEEchHHeeeCCCCCCHHHhhhhhcch
Confidence            99999976666678999999999999999976543222222333457999999999999999999999999999999999


Q ss_pred             hhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCc
Q 018382          166 VTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSL  245 (357)
Q Consensus       166 ~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~  245 (357)
                      .|+|+++.....+++|++|||.|+|++|++++|+|+..|++|++++.+++++..+.+++|++++++.++.+.+.+..+++
T Consensus       169 ~ta~~al~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~Ga~~vi~~~~~~~~~~~~~~~  248 (360)
T PLN02586        169 ITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRLGADSFLVSTDPEKMKAAIGTM  248 (360)
T ss_pred             HHHHHHHHHhcccCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhCCCcEEEcCCCHHHHHhhcCCC
Confidence            99999987777668999999999999999999999999999998888777766555559999999877655555555689


Q ss_pred             cEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCcccchHHHhhccceEEEEeecCHHHHHHHHHHHHhcCCCccEEEe
Q 018382          246 DYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEVI  325 (357)
Q Consensus       246 d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~~i~~~  325 (357)
                      |+|||++|....+..++++++++|+++.+|.......++...++.++..+.++..++.++++++++++.++++++.+++|
T Consensus       249 D~vid~~g~~~~~~~~~~~l~~~G~iv~vG~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~li~~g~i~~~~~~~  328 (360)
T PLN02586        249 DYIIDTVSAVHALGPLLGLLKVNGKLITLGLPEKPLELPIFPLVLGRKLVGGSDIGGIKETQEMLDFCAKHNITADIELI  328 (360)
T ss_pred             CEEEECCCCHHHHHHHHHHhcCCcEEEEeCCCCCCCccCHHHHHhCCeEEEEcCcCCHHHHHHHHHHHHhCCCCCcEEEE
Confidence            99999999765688899999999999999876544556666777788888898887788899999999999999877899


Q ss_pred             ecccHHHHHHHHHcCCccEEEEEecCC
Q 018382          326 KMDYVNKAFERLEKNDVRYRFVVDVAG  352 (357)
Q Consensus       326 ~~~~~~~a~~~~~~~~~~Gkvvi~~~~  352 (357)
                      +|+|+++||+.+++++..||+++++..
T Consensus       329 ~l~~~~~A~~~~~~~~~~gkvvi~~~~  355 (360)
T PLN02586        329 RMDEINTAMERLAKSDVRYRFVIDVAN  355 (360)
T ss_pred             eHHHHHHHHHHHHcCCCcEEEEEEccc
Confidence            999999999999999988999999843

>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=2.7e-56  Score=384.49  Aligned_cols=333  Identities=24%  Similarity=0.374  Sum_probs=294.0

Q ss_pred             hheeeehccCCCCCcceeeeecCCC-CCCcEEEEEeeeccccchHHHHhcCCCC---CCCCCccCccccEEEEEeCCCCC
Q 018382            8 RATIGWAAKDPSGILSPYTYTLRNT-GAEDVYIKVLYCGICHTDIHQIKNDLGM---SNYPMVPGHEVVGEVKEVGSEVS   83 (357)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~p~~-~~~evlV~v~~~~~~~~D~~~~~g~~~~---~~~p~~lG~e~~G~V~~vG~~v~   83 (357)
                      ..+.+.+++ ++++++++++|.|++ .|+||+|++++++||++|+|++......   -+.|+++|||.+|+|+++|+.|+
T Consensus         3 ~~~~A~vl~-g~~di~i~~~p~p~i~~p~eVlv~i~a~GICGSDvHy~~~G~ig~~v~k~PmvlGHEssGiV~evG~~Vk   81 (354)
T KOG0024|consen    3 ADNLALVLR-GKGDIRIEQRPIPTITDPDEVLVAIKAVGICGSDVHYYTHGRIGDFVVKKPMVLGHESSGIVEEVGDEVK   81 (354)
T ss_pred             cccceeEEE-ccCceeEeeCCCCCCCCCCEEEEEeeeEEecCccchhhccCCcCccccccccccccccccchhhhccccc
Confidence            456777777 688999999999998 9999999999999999999999876542   24799999999999999999999


Q ss_pred             CCCCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccc
Q 018382           84 NFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLC  163 (357)
Q Consensus        84 ~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~  163 (357)
                      ++++||||++.|.. +|+.|+.|+.|++|.|+...+...      .+.+|+|++|++.+++.++|||+++|++++|.+- 
T Consensus        82 ~LkVGDrVaiEpg~-~c~~cd~CK~GrYNlCp~m~f~at------pp~~G~la~y~~~~~dfc~KLPd~vs~eeGAl~e-  153 (354)
T KOG0024|consen   82 HLKVGDRVAIEPGL-PCRDCDFCKEGRYNLCPHMVFCAT------PPVDGTLAEYYVHPADFCYKLPDNVSFEEGALIE-  153 (354)
T ss_pred             ccccCCeEEecCCC-ccccchhhhCcccccCCccccccC------CCcCCceEEEEEechHheeeCCCCCchhhccccc-
Confidence            99999999776654 599999999999999998876644      3589999999999999999999999999998554 


Q ss_pred             hhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCcEEEcCCChh---HHH
Q 018382          164 AGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGADQYLVSSDAT---RMQ  239 (357)
Q Consensus       164 ~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~---~~~  239 (357)
                      +++++|+|.+..+. ++|++|||+|+|++|+++...||.+|+ +|++++..+.|++.+++ ||++.+.+....+   .+.
T Consensus       154 PLsV~~HAcr~~~v-k~Gs~vLV~GAGPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~-~Ga~~~~~~~~~~~~~~~~  231 (354)
T KOG0024|consen  154 PLSVGVHACRRAGV-KKGSKVLVLGAGPIGLLTGLVAKAMGASDVVITDLVANRLELAKK-FGATVTDPSSHKSSPQELA  231 (354)
T ss_pred             chhhhhhhhhhcCc-ccCCeEEEECCcHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHH-hCCeEEeeccccccHHHHH
Confidence            68999999987776 999999999999999999999999999 99999999999999999 9999988766532   222


Q ss_pred             Hh-hC-----CccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCcccchHHHhhccceEEEEeecCHHHHHHHHHHH
Q 018382          240 EA-AD-----SLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFC  313 (357)
Q Consensus       240 ~~-~~-----~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~  313 (357)
                      +. .+     .+|+.|||+|....++.++..++.+|++++.++.....+|++.....+++++.|++.+....|+.+++++
T Consensus       232 ~~v~~~~g~~~~d~~~dCsG~~~~~~aai~a~r~gGt~vlvg~g~~~~~fpi~~v~~kE~~~~g~fry~~~~y~~ai~li  311 (354)
T KOG0024|consen  232 ELVEKALGKKQPDVTFDCSGAEVTIRAAIKATRSGGTVVLVGMGAEEIQFPIIDVALKEVDLRGSFRYCNGDYPTAIELV  311 (354)
T ss_pred             HHHHhhccccCCCeEEEccCchHHHHHHHHHhccCCEEEEeccCCCccccChhhhhhheeeeeeeeeeccccHHHHHHHH
Confidence            22 11     4999999999987899999999999999999998888999999999999999999999888999999999


Q ss_pred             HhcCCCc--cE-EEeecccHHHHHHHHHcCCcc-EEEEEecC
Q 018382          314 REKGVTS--MI-EVIKMDYVNKAFERLEKNDVR-YRFVVDVA  351 (357)
Q Consensus       314 ~~~~l~~--~i-~~~~~~~~~~a~~~~~~~~~~-Gkvvi~~~  351 (357)
                      ++|++..  +| +.|+++++.+||+.+.+++.. -|+++..+
T Consensus       312 ~sGki~~k~lIT~r~~~~~~~eAf~~~~~~~~~~iKv~i~~~  353 (354)
T KOG0024|consen  312 SSGKIDVKPLITHRYKFDDADEAFETLQHGEEGVIKVIITGP  353 (354)
T ss_pred             HcCCcCchhheecccccchHHHHHHHHHhCcCCceEEEEeCC
Confidence            9998875  67 999999999999999887753 48888764

>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

Probab=100.00  E-value=3.9e-56  Score=386.90  Aligned_cols=337  Identities=24%  Similarity=0.366  Sum_probs=295.5

Q ss_pred             hheeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCC
Q 018382            8 RATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKV   87 (357)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~   87 (357)
                      |++++.+.+...++++++|+++++|+++|||||+.++|+||+|....+|..|.+ +|.+||||.+|+|++||+.|+.+++
T Consensus         1 mk~~aAV~~~~~~Pl~i~ei~l~~P~~gEVlVri~AtGVCHTD~~~~~G~~p~~-~P~vLGHEgAGiVe~VG~gVt~vkp   79 (366)
T COG1062           1 MKTRAAVAREAGKPLEIEEVDLDPPRAGEVLVRITATGVCHTDAHTLSGDDPEG-FPAVLGHEGAGIVEAVGEGVTSVKP   79 (366)
T ss_pred             CCceEeeeecCCCCeEEEEEecCCCCCCeEEEEEEEeeccccchhhhcCCCCCC-CceecccccccEEEEecCCccccCC
Confidence            356666767788999999999999999999999999999999999999999987 9999999999999999999999999


Q ss_pred             CCEEEEccccCCCCCCcccccCccccccccc-ccCccccCCCCC-----------C--CCccceEEEeeCcceEECCCCC
Q 018382           88 GDKVGVGVLVGCCRNCRPCEADVEQYCNKKI-WSYNDVYTDGKP-----------T--QGGFAESMVVDQKFVVKIPDGM  153 (357)
Q Consensus        88 Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-----------~--~G~~~~~~~v~~~~~~~lP~~l  153 (357)
                      ||+| +..+.+.||.|..|..|.+|.|.... -...+.+.+|..           .  .++|++|.++++..++|++++.
T Consensus        80 GDhV-I~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m~dGttrls~~~~~~~h~lG~stFa~y~vv~~~s~vki~~~~  158 (366)
T COG1062          80 GDHV-ILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVKIDPDA  158 (366)
T ss_pred             CCEE-EEcccCCCCCCchhhCCCcccccchhhhcccccccCCceeeecCCcceeeeeccccchhheeecccceEECCCCC
Confidence            9999 67788889999999999999998654 223333444411           1  3599999999999999999999


Q ss_pred             CccccccccchhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCcEEEcC
Q 018382          154 ALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGADQYLVS  232 (357)
Q Consensus       154 ~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~~vv~~  232 (357)
                      +++.++.+.|...|.+.++.+..++++|++|.|.|.|++|+++||-|+..|+ ++++++.+++|.+++++ ||+++++|.
T Consensus       159 p~~~a~llGCgV~TG~Gav~nta~v~~G~tvaV~GlGgVGlaaI~gA~~agA~~IiAvD~~~~Kl~~A~~-fGAT~~vn~  237 (366)
T COG1062         159 PLEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGLGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKK-FGATHFVNP  237 (366)
T ss_pred             CccceEEEeeeeccChHHhhhcccCCCCCeEEEEeccHhHHHHHHHHHHcCCceEEEEeCCHHHHHHHHh-cCCceeecc
Confidence            9999999999999999999999999999999999999999999999999999 99999999999999999 999999998


Q ss_pred             CCh-hH---HHHhhC-CccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCcc--cchHHHhhccceEEEEeec---C
Q 018382          233 SDA-TR---MQEAAD-SLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQ--FLTPMVMLGRKAITGSFIG---S  302 (357)
Q Consensus       233 ~~~-~~---~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~--~~~~~~~~~~~~i~g~~~~---~  302 (357)
                      ++. +.   +.+++. ++|++|||+|....++.+++++.++|+.+.+|.......  .+...++.. .++.|++.+   .
T Consensus       238 ~~~~~vv~~i~~~T~gG~d~~~e~~G~~~~~~~al~~~~~~G~~v~iGv~~~~~~i~~~~~~lv~g-r~~~Gs~~G~~~p  316 (366)
T COG1062         238 KEVDDVVEAIVELTDGGADYAFECVGNVEVMRQALEATHRGGTSVIIGVAGAGQEISTRPFQLVTG-RVWKGSAFGGARP  316 (366)
T ss_pred             hhhhhHHHHHHHhcCCCCCEEEEccCCHHHHHHHHHHHhcCCeEEEEecCCCCceeecChHHeecc-ceEEEEeecCCcc
Confidence            875 23   445555 899999999998889999999999999999998764433  445555555 899999987   3


Q ss_pred             HHHHHHHHHHHHhcCCCc--cE-EEeecccHHHHHHHHHcCCccEEEEEe
Q 018382          303 MKETKEMLEFCREKGVTS--MI-EVIKMDYVNKAFERLEKNDVRYRFVVD  349 (357)
Q Consensus       303 ~~~~~~~~~~~~~~~l~~--~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~  349 (357)
                      ..++..++++..+|+|..  .| +.++|+||+|||+.|++++.. |-||.
T Consensus       317 ~~diP~lv~~y~~Gkl~~d~lvt~~~~Le~INeaf~~m~~G~~I-R~Vi~  365 (366)
T COG1062         317 RSDIPRLVDLYMAGKLPLDRLVTHTIPLEDINEAFDLMHEGKSI-RSVIR  365 (366)
T ss_pred             ccchhHHHHHHHcCCCchhHHhhccccHHHHHHHHHHHhCCcee-eEEec
Confidence            368999999999998875  67 899999999999999999986 55554

>PLN02514 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=3.2e-54  Score=401.11  Aligned_cols=357  Identities=86%  Similarity=1.376  Sum_probs=311.2

Q ss_pred             CCCchhhhheeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCC
Q 018382            1 MGSLDTERATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGS   80 (357)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~   80 (357)
                      |.+..-.+++++|....+.+.+.+++++.|+|+++||+||+.++++|++|++.+.|.++...+|.++|||++|+|+++|+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVrv~a~gi~~~D~~~~~g~~~~~~~p~i~G~E~~G~Vv~vG~   80 (357)
T PLN02514          1 MGSLEAEKKTTGWAARDPSGHLSPYTYTLRKTGPEDVVIKVIYCGICHTDLHQIKNDLGMSNYPMVPGHEVVGEVVEVGS   80 (357)
T ss_pred             CCccCCCceEEEEEEecCCCCceEEeecCCCCCCCcEEEEEEEeccChHHHHhhcCCcCcCCCCccCCceeeEEEEEECC
Confidence            55555567789999887778899999999999999999999999999999999988765445688999999999999999


Q ss_pred             CCCCCCCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCcccccc
Q 018382           81 EVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAP  160 (357)
Q Consensus        81 ~v~~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~  160 (357)
                      ++++|++||+|++.+...+||.|..|.+|.++.|....+...+.+..|....|+|+||++++.+.++++|+++++++++.
T Consensus        81 ~v~~~~~Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~  160 (357)
T PLN02514         81 DVSKFTVGDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVYTDGKPTQGGFASAMVVDQKFVVKIPEGMAPEQAAP  160 (357)
T ss_pred             CcccccCCCEEEEcCccccCCCChhHhCCCcccCCCccccccccccCCccCCCccccEEEEchHHeEECCCCCCHHHhhh
Confidence            99999999999877777789999999999999998764433322333444679999999999999999999999999999


Q ss_pred             ccchhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHH
Q 018382          161 LLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQE  240 (357)
Q Consensus       161 ~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~  240 (357)
                      +++.+.|||.++......++|++|+|+|+|++|++++|+|+..|++|++++++++++..+.+++|++++++..+.+.+.+
T Consensus       161 l~~~~~ta~~al~~~~~~~~g~~vlV~G~G~vG~~av~~Ak~~G~~vi~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~  240 (357)
T PLN02514        161 LLCAGVTVYSPLSHFGLKQSGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKREEALEHLGADDYLVSSDAAEMQE  240 (357)
T ss_pred             hhhhHHHHHHHHHHcccCCCCCeEEEEcccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhcCCcEEecCCChHHHHH
Confidence            99999999999988777689999999999999999999999999999999988888777766699998887665544555


Q ss_pred             hhCCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCcccchHHHhhccceEEEEeecCHHHHHHHHHHHHhcCCCc
Q 018382          241 AADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTS  320 (357)
Q Consensus       241 ~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~  320 (357)
                      ...++|++||++|....+..++++++++|+++.+|.......+....++.++.++.|++....++++++++++.++.+++
T Consensus       241 ~~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~g~l~~  320 (357)
T PLN02514        241 AADSLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVINTPLQFVTPMLMLGRKVITGSFIGSMKETEEMLEFCKEKGLTS  320 (357)
T ss_pred             hcCCCcEEEECCCchHHHHHHHHHhccCCEEEEECCCCCCCcccHHHHhhCCcEEEEEecCCHHHHHHHHHHHHhCCCcC
Confidence            55689999999997557889999999999999999875555666777788999999999988889999999999999987


Q ss_pred             cEEEeecccHHHHHHHHHcCCccEEEEEecCCCcCCC
Q 018382          321 MIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGSKLDP  357 (357)
Q Consensus       321 ~i~~~~~~~~~~a~~~~~~~~~~Gkvvi~~~~~~~~~  357 (357)
                      .+++|+++|+.+||+.+++++..||+++.++.+.+|.
T Consensus       321 ~i~~~~l~~~~~A~~~~~~~~~~gk~v~~~~~~~~~~  357 (357)
T PLN02514        321 MIEVVKMDYVNTAFERLEKNDVRYRFVVDVAGSNLDA  357 (357)
T ss_pred             cEEEEcHHHHHHHHHHHHcCCCceeEEEEccccccCC
Confidence            7788999999999999999999999999998887763

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=5.6e-54  Score=400.87  Aligned_cols=345  Identities=51%  Similarity=0.971  Sum_probs=295.1

Q ss_pred             hhheeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCC
Q 018382            7 ERATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFK   86 (357)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~   86 (357)
                      +.++.++...++++.+...+++.|+|+++||+||+.++++|++|++++.|.++...+|.++|||++|+|+++|+++++|+
T Consensus         4 ~~~a~~~~~~~~~~~l~~~~~~~p~~~~~eVlVkV~a~gic~sD~~~~~G~~~~~~~p~i~GhE~aG~Vv~vG~~v~~~~   83 (375)
T PLN02178          4 QNKAFGWAANDESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGFSRYPIIPGHEIVGIATKVGKNVTKFK   83 (375)
T ss_pred             cceeEEEEEccCCCCceEEeecCCCCCCCeEEEEEEEEcCchHHHHHhcCCCCCCCCCcccCceeeEEEEEECCCCCccC
Confidence            45567777777778898899999999999999999999999999999988764445688999999999999999999999


Q ss_pred             CCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhh
Q 018382           87 VGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGV  166 (357)
Q Consensus        87 ~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~  166 (357)
                      +||||++.+....||.|..|+.|.++.|+...+........|...+|+|+||++++++.++++|+++++++++++++.+.
T Consensus        84 vGdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~~~  163 (375)
T PLN02178         84 EGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGI  163 (375)
T ss_pred             CCCEEEEcCccCCCCCChhHhCcchhcCCCccccccccccCCCcCCCccccEEEEchHHeEECCCCCCHHHcchhhccch
Confidence            99999766666679999999999999999865432211112333479999999999999999999999999999999999


Q ss_pred             hhhhhhhccCC-CCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHH-HHHHHHhcCCcEEEcCCChhHHHHhhCC
Q 018382          167 TVFSPLSHFGL-KQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKK-RVEAMEHLGADQYLVSSDATRMQEAADS  244 (357)
Q Consensus       167 ta~~~l~~~~~-~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~-~~~~~~~~g~~~vv~~~~~~~~~~~~~~  244 (357)
                      |+|+++..... .++|++|+|.|+|++|++++|+|+..|++|+++++++++ .+.+++ +|++++++..+.+.+.+...+
T Consensus       164 ta~~al~~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~~-lGa~~~i~~~~~~~v~~~~~~  242 (375)
T PLN02178        164 TVYSPMKYYGMTKESGKRLGVNGLGGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDR-LGADSFLVTTDSQKMKEAVGT  242 (375)
T ss_pred             HHHHHHHHhCCCCCCCCEEEEEcccHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHHh-CCCcEEEcCcCHHHHHHhhCC
Confidence            99999876654 268999999999999999999999999999998877665 445544 999999987665445555557


Q ss_pred             ccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCcccchHHHhhccceEEEEeecCHHHHHHHHHHHHhcCCCccEEE
Q 018382          245 LDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEV  324 (357)
Q Consensus       245 ~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~~i~~  324 (357)
                      +|+|||++|....+..++++++++|+++.+|.......++...++.+++++.|++.+..++++++++++.+|++++.+++
T Consensus       243 ~D~vid~~G~~~~~~~~~~~l~~~G~iv~vG~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~i~~~i~~  322 (375)
T PLN02178        243 MDFIIDTVSAEHALLPLFSLLKVSGKLVALGLPEKPLDLPIFPLVLGRKMVGGSQIGGMKETQEMLEFCAKHKIVSDIEL  322 (375)
T ss_pred             CcEEEECCCcHHHHHHHHHhhcCCCEEEEEccCCCCCccCHHHHHhCCeEEEEeCccCHHHHHHHHHHHHhCCCcccEEE
Confidence            99999999987567899999999999999987655555677777889999999998888899999999999999988888


Q ss_pred             eecccHHHHHHHHHcCCccEEEEEecCC
Q 018382          325 IKMDYVNKAFERLEKNDVRYRFVVDVAG  352 (357)
Q Consensus       325 ~~~~~~~~a~~~~~~~~~~Gkvvi~~~~  352 (357)
                      |+|+|+++||+.+++++..||+++++.+
T Consensus       323 ~~l~~~~~A~~~~~~~~~~gkvvi~~~~  350 (375)
T PLN02178        323 IKMSDINSAMDRLAKSDVRYRFVIDVAN  350 (375)
T ss_pred             EeHHHHHHHHHHHHcCCCceEEEEEecc
Confidence            9999999999999999999999999843

>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=4.4e-52  Score=355.72  Aligned_cols=341  Identities=24%  Similarity=0.348  Sum_probs=297.8

Q ss_pred             hhhheeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCC
Q 018382            6 TERATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNF   85 (357)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~   85 (357)
                      .+.+++|-+.+++.++|.++|+.+++|+.+||+||+.++++||+|...+.|..+...+|.+||||.+|+|+.+|+.|+++
T Consensus         4 kvI~CKAAV~w~a~~PL~IEei~V~pPka~EVRIKI~~t~vCHTD~~~~~g~~~~~~fP~IlGHEaaGIVESvGegV~~v   83 (375)
T KOG0022|consen    4 KVITCKAAVAWEAGKPLVIEEIEVAPPKAHEVRIKILATGVCHTDAYVWSGKDPEGLFPVILGHEAAGIVESVGEGVTTV   83 (375)
T ss_pred             CceEEeEeeeccCCCCeeEEEEEeCCCCCceEEEEEEEEeeccccceeecCCCccccCceEecccceeEEEEecCCcccc
Confidence            36778888888889999999999999999999999999999999999999998888999999999999999999999999


Q ss_pred             CCCCEEEEccccCCCCCCcccccCcccccccccccC--ccccCCCCCC-------------CCccceEEEeeCcceEECC
Q 018382           86 KVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSY--NDVYTDGKPT-------------QGGFAESMVVDQKFVVKIP  150 (357)
Q Consensus        86 ~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-------------~G~~~~~~~v~~~~~~~lP  150 (357)
                      ++||+| +..+.++||.|..|+.+..|.|.+.....  ..+.+||..+             ..+|+||.+++...+++++
T Consensus        84 k~GD~V-iplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~~~gk~iyHfmg~StFsEYTVv~~~~v~kId  162 (375)
T KOG0022|consen   84 KPGDHV-IPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFTCKGKPIYHFMGTSTFSEYTVVDDISVAKID  162 (375)
T ss_pred             CCCCEE-eeccccCCCCcccccCCCCChhhhhcccccccccccCCceeeeeCCCceEEecccccceeEEEeecceeEecC
Confidence            999999 77889999999999999999999887554  2333344222             2499999999999999999


Q ss_pred             CCCCccccccccchhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCcEE
Q 018382          151 DGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGADQY  229 (357)
Q Consensus       151 ~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~~v  229 (357)
                      +..+++.++.+.|..+|.|.|..+.+.++||+++.|.|.|++|+++++-|+..|+ +++.++-+++|.+.+++ ||+++.
T Consensus       163 ~~aPl~kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfGLG~VGLav~~Gaka~GAsrIIgvDiN~~Kf~~ak~-fGaTe~  241 (375)
T KOG0022|consen  163 PSAPLEKVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFGLGGVGLAVAMGAKAAGASRIIGVDINPDKFEKAKE-FGATEF  241 (375)
T ss_pred             CCCChhheeEeeccccccchhhhhhcccCCCCEEEEEecchHHHHHHHhHHhcCcccEEEEecCHHHHHHHHh-cCccee
Confidence            9999999999999999999999999999999999999999999999999999999 99999999999999999 999999


Q ss_pred             EcCCCh-----hHHHHhhC-CccEEEEcCCCCCChHHHHhccccC-CeEEEEccCCCCccc--chHHHhhccceEEEEee
Q 018382          230 LVSSDA-----TRMQEAAD-SLDYIIDTVPANHPLEPYLSLLKLD-GKLILTGVINTPMQF--LTPMVMLGRKAITGSFI  300 (357)
Q Consensus       230 v~~~~~-----~~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~--~~~~~~~~~~~i~g~~~  300 (357)
                      +|..+.     +.+.++++ |+|+-|||+|....+++++.+...+ |+-|.+|.......+  ..+.+ ....++.|+..
T Consensus       242 iNp~d~~~~i~evi~EmTdgGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~~~~i~~~p~~l-~~GR~~~Gs~F  320 (375)
T KOG0022|consen  242 INPKDLKKPIQEVIIEMTDGGVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAAGQEISTRPFQL-VTGRTWKGSAF  320 (375)
T ss_pred             cChhhccccHHHHHHHHhcCCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCCCcccccchhhh-ccccEEEEEec
Confidence            998752     34555655 8999999999998899999999998 999999987655443  33333 45778888887


Q ss_pred             cC---HHHHHHHHHHHHhcCCC--ccE-EEeecccHHHHHHHHHcCCccEEEEEec
Q 018382          301 GS---MKETKEMLEFCREKGVT--SMI-EVIKMDYVNKAFERLEKNDVRYRFVVDV  350 (357)
Q Consensus       301 ~~---~~~~~~~~~~~~~~~l~--~~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~  350 (357)
                      +.   +.+++.+.+...++.+.  ..| |+++|++|++||++|.+++.. |.|+.+
T Consensus       321 GG~K~~~~iP~lV~~y~~~~l~ld~~ITh~l~f~~In~AF~ll~~Gksi-R~vl~~  375 (375)
T KOG0022|consen  321 GGFKSKSDIPKLVKDYMKKKLNLDEFITHELPFEEINKAFDLLHEGKSI-RCVLWM  375 (375)
T ss_pred             ccccchhhhhHHHHHHHhCccchhhhhhcccCHHHHHHHHHHHhCCceE-EEEEeC
Confidence            64   46677777777778665  467 999999999999999999987 877753

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=100.00  E-value=8.9e-51  Score=376.39  Aligned_cols=333  Identities=18%  Similarity=0.275  Sum_probs=278.3

Q ss_pred             hhheeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHh-cCCC--CCCCCCccCccccEEEEEeCCCCC
Q 018382            7 ERATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIK-NDLG--MSNYPMVPGHEVVGEVKEVGSEVS   83 (357)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~-g~~~--~~~~p~~lG~e~~G~V~~vG~~v~   83 (357)
                      ..++++.++. +++.+++++++.| +.++|||||+.++++|++|++++. |..+  ...+|.++|||++|+|+++  +++
T Consensus         2 ~~~~~~~~~~-~~~~~~~~~~~~p-~~~~evlVkv~a~gic~sD~~~~~~g~~~~~~~~~p~v~GhE~~G~V~~v--~v~   77 (343)
T PRK09880          2 QVKTQSCVVA-GKKDVAVTEQEIE-WNNNGTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVHS--DSS   77 (343)
T ss_pred             cccceEEEEe-cCCceEEEecCCC-CCCCeEEEEEEEEEECccccHhhccCCcccccccCCcccCcccEEEEEEe--cCc
Confidence            4567777776 6788999999997 689999999999999999999875 4332  2357899999999999999  788


Q ss_pred             CCCCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccc
Q 018382           84 NFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLC  163 (357)
Q Consensus        84 ~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~  163 (357)
                      +|++||||++.+. .+||.|.+|+.|.++.|+...+.+...+  ....+|+|+||++++++.++++|+++++++++ +..
T Consensus        78 ~~~vGdrV~~~~~-~~cg~c~~c~~g~~~~c~~~~~~g~~~~--~~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa-~~~  153 (343)
T PRK09880         78 GLKEGQTVAINPS-KPCGHCKYCLSHNENQCTTMRFFGSAMY--FPHVDGGFTRYKVVDTAQCIPYPEKADEKVMA-FAE  153 (343)
T ss_pred             cCCCCCEEEECCC-CCCcCChhhcCCChhhCCCcceeecccc--cCCCCCceeeeEEechHHeEECCCCCCHHHHH-hhc
Confidence            9999999977654 5699999999999999987654211111  11247999999999999999999999997655 556


Q ss_pred             hhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHh-
Q 018382          164 AGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEA-  241 (357)
Q Consensus       164 ~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~-  241 (357)
                      ++.+||+++.+... .++++|+|+|+|++|++++|+|+..|+ +|+++++++++.+.+++ +|+++++++++.+..+.. 
T Consensus       154 ~~~~a~~al~~~~~-~~g~~VlV~G~G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~-lGa~~vi~~~~~~~~~~~~  231 (343)
T PRK09880        154 PLAVAIHAAHQAGD-LQGKRVFVSGVGPIGCLIVAAVKTLGAAEIVCADVSPRSLSLARE-MGADKLVNPQNDDLDHYKA  231 (343)
T ss_pred             HHHHHHHHHHhcCC-CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHH-cCCcEEecCCcccHHHHhc
Confidence            77899999988766 689999999999999999999999999 68999999999988887 999999988764432211 


Q ss_pred             -hCCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCcccchHHHhhccceEEEEeecCHHHHHHHHHHHHhcCCCc
Q 018382          242 -ADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTS  320 (357)
Q Consensus       242 -~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~  320 (357)
                       .+++|+|||++|....+..++++++++|+++.+|.......++...++.+++++.++..+ .+++++++++++++.+++
T Consensus       232 ~~g~~D~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~g~~~~-~~~~~~~~~l~~~g~i~~  310 (343)
T PRK09880        232 EKGYFDVSFEVSGHPSSINTCLEVTRAKGVMVQVGMGGAPPEFPMMTLIVKEISLKGSFRF-TEEFNTAVSWLANGVINP  310 (343)
T ss_pred             cCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCCccCHHHHHhCCcEEEEEeec-cccHHHHHHHHHcCCCCc
Confidence             236999999999865788999999999999999976555566777788899999998765 467899999999999986


Q ss_pred             --cE-EEeecccHHHHHHHHHcCCccEEEEEec
Q 018382          321 --MI-EVIKMDYVNKAFERLEKNDVRYRFVVDV  350 (357)
Q Consensus       321 --~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~  350 (357)
                        .+ ++|+++|+++|++.+++++..||+++.+
T Consensus       311 ~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  343 (343)
T PRK09880        311 LPLLSAEYPFTDLEEALIFAGDKTQAAKVQLVF  343 (343)
T ss_pred             hhheEEEEEHHHHHHHHHHHhcCCCceEEEEeC
Confidence              56 8999999999999999988889999864

>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein

Probab=100.00  E-value=2e-50  Score=371.39  Aligned_cols=315  Identities=29%  Similarity=0.480  Sum_probs=276.4

Q ss_pred             CCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCCCCEEEEccccCC
Q 018382           20 GILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVGVLVGC   99 (357)
Q Consensus        20 ~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~   99 (357)
                      ..++++++|.|.|+++||+||+.++++|++|++++.|.++...+|.++|||++|+|+++|+++++|++||+|++.+....
T Consensus        13 ~~l~~~~~p~P~~~~~evlVkv~~~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~   92 (329)
T TIGR02822        13 GPLRFVERPVPRPGPGELLVRVRACGVCRTDLHVSEGDLPVHRPRVTPGHEVVGEVAGRGADAGGFAVGDRVGIAWLRRT   92 (329)
T ss_pred             CCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCCCCCCCccCCcceEEEEEEECCCCcccCCCCEEEEcCccCc
Confidence            46889999999999999999999999999999999987654445789999999999999999999999999988777778


Q ss_pred             CCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhhhhhhhhccCCCC
Q 018382          100 CRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQ  179 (357)
Q Consensus       100 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~  179 (357)
                      |+.|..|..|.++.|+...+.       |...+|+|+||+.++++.++++|+++++++++.+++.+.|||+++.. ..++
T Consensus        93 c~~c~~c~~g~~~~c~~~~~~-------g~~~~G~~aey~~v~~~~~~~lP~~~~~~~aa~l~~~~~ta~~~~~~-~~~~  164 (329)
T TIGR02822        93 CGVCRYCRRGAENLCPASRYT-------GWDTDGGYAEYTTVPAAFAYRLPTGYDDVELAPLLCAGIIGYRALLR-ASLP  164 (329)
T ss_pred             CCCChHHhCcCcccCCCcccC-------CcccCCcceeEEEeccccEEECCCCCCHHHhHHHhccchHHHHHHHh-cCCC
Confidence            999999999999999876532       33457999999999999999999999999999999999999999976 4559


Q ss_pred             CCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCCChH
Q 018382          180 SGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLE  259 (357)
Q Consensus       180 ~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~~~  259 (357)
                      +|++|||+|+|++|++++|+|+..|++|+++++++++.+.+++ +|++++++..+..     .+++|+++++.+....+.
T Consensus       165 ~g~~VlV~G~g~iG~~a~~~a~~~G~~vi~~~~~~~~~~~a~~-~Ga~~vi~~~~~~-----~~~~d~~i~~~~~~~~~~  238 (329)
T TIGR02822       165 PGGRLGLYGFGGSAHLTAQVALAQGATVHVMTRGAAARRLALA-LGAASAGGAYDTP-----PEPLDAAILFAPAGGLVP  238 (329)
T ss_pred             CCCEEEEEcCCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHH-hCCceeccccccC-----cccceEEEECCCcHHHHH
Confidence            9999999999999999999999999999999999999888877 9999998754321     247899998887766788


Q ss_pred             HHHhccccCCeEEEEccCCC-CcccchHHHhhccceEEEEeecCHHHHHHHHHHHHhcCCCccEEEeecccHHHHHHHHH
Q 018382          260 PYLSLLKLDGKLILTGVINT-PMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLE  338 (357)
Q Consensus       260 ~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~a~~~~~  338 (357)
                      .++++++++|+++.+|.... ...++...++.+++++.++.....+++.++++++.+++++...++|+|+|+++||+.++
T Consensus       239 ~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~i~~i~~~~~l~~~~~A~~~~~  318 (329)
T TIGR02822       239 PALEALDRGGVLAVAGIHLTDTPPLNYQRHLFYERQIRSVTSNTRADAREFLELAAQHGVRVTTHTYPLSEADRALRDLK  318 (329)
T ss_pred             HHHHhhCCCcEEEEEeccCccCCCCCHHHHhhCCcEEEEeecCCHHHHHHHHHHHHhCCCeeEEEEEeHHHHHHHHHHHH
Confidence            99999999999999997533 23455666778899999998877788999999999999974338999999999999999


Q ss_pred             cCCccEEEEE
Q 018382          339 KNDVRYRFVV  348 (357)
Q Consensus       339 ~~~~~Gkvvi  348 (357)
                      +++..||+|+
T Consensus       319 ~~~~~Gkvvl  328 (329)
T TIGR02822       319 AGRFDGAAVL  328 (329)
T ss_pred             cCCCceEEEe
Confidence            9999999987

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=100.00  E-value=8.9e-51  Score=370.06  Aligned_cols=308  Identities=26%  Similarity=0.385  Sum_probs=263.7

Q ss_pred             heeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcC-CCCCCCCCccCccccEEEEEeCCCCCCCCC
Q 018382            9 ATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKND-LGMSNYPMVPGHEVVGEVKEVGSEVSNFKV   87 (357)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~-~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~   87 (357)
                      +...+...+++..++++|+|.|.|++|||||||+++++||.|+.+++|. .+..++|.++|.|++|+|+++|++|++|++
T Consensus         2 ka~~~~~~g~~~~l~~~e~~~P~p~~geVlVrV~a~gvN~~D~~~r~G~~~~~~~~P~i~G~d~aG~V~avG~~V~~~~~   81 (326)
T COG0604           2 KAVVVEEFGGPEVLKVVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLAPPVRPLPFIPGSEAAGVVVAVGSGVTGFKV   81 (326)
T ss_pred             eEEEEeccCCCceeEEEecCCCCCCCCeEEEEEEEeecChHHHHhccCCCCCCCCCCCcccceeEEEEEEeCCCCCCcCC
Confidence            3445555566666889999999999999999999999999999999997 345568999999999999999999999999


Q ss_pred             CCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhh
Q 018382           88 GDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVT  167 (357)
Q Consensus        88 Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~t  167 (357)
                      ||||+...  .                              ....|+|+||++++++.++++|+++|+++||++++.++|
T Consensus        82 GdrV~~~~--~------------------------------~~~~G~~AEy~~v~a~~~~~~P~~ls~~eAAal~~~~~T  129 (326)
T COG0604          82 GDRVAALG--G------------------------------VGRDGGYAEYVVVPADWLVPLPDGLSFEEAAALPLAGLT  129 (326)
T ss_pred             CCEEEEcc--C------------------------------CCCCCcceeEEEecHHHceeCCCCCCHHHHHHHHHHHHH
Confidence            99997541  0                              015799999999999999999999999999999999999


Q ss_pred             hhhhhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHh---hC
Q 018382          168 VFSPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEA---AD  243 (357)
Q Consensus       168 a~~~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~---~~  243 (357)
                      ||++|.....+++|++|||+|+ |++|.+++|+||.+|++++++++++++.+.+++ +|+++++++++.++.+++   ++
T Consensus       130 A~~~l~~~~~l~~g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~~~~~-lGAd~vi~y~~~~~~~~v~~~t~  208 (326)
T COG0604         130 AWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLELLKE-LGADHVINYREEDFVEQVRELTG  208 (326)
T ss_pred             HHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHh-cCCCEEEcCCcccHHHHHHHHcC
Confidence            9999999888899999999985 999999999999999988888888888886666 999999998886654444   43


Q ss_pred             --CccEEEEcCCCCCChHHHHhccccCCeEEEEccCCC--CcccchHHHhhccceEEEEeecCH------HHHHHHHHHH
Q 018382          244 --SLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINT--PMQFLTPMVMLGRKAITGSFIGSM------KETKEMLEFC  313 (357)
Q Consensus       244 --~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~~~i~g~~~~~~------~~~~~~~~~~  313 (357)
                        ++|+|||++|+. .+..++++|+++|+++.+|...+  ...++...++.+.++..+......      +.++++++++
T Consensus       209 g~gvDvv~D~vG~~-~~~~~l~~l~~~G~lv~ig~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~  287 (326)
T COG0604         209 GKGVDVVLDTVGGD-TFAASLAALAPGGRLVSIGALSGGPPVPLNLLPLLGKRLTLRGVTLGSRDPEALAEALAELFDLL  287 (326)
T ss_pred             CCCceEEEECCCHH-HHHHHHHHhccCCEEEEEecCCCCCccccCHHHHhhccEEEEEecceecchHHHHHHHHHHHHHH
Confidence              699999999998 88899999999999999998773  234556667778888888887644      5667899999


Q ss_pred             HhcCCCccE-EEeecccHHHHHHHHHc-CCccEEEEEec
Q 018382          314 REKGVTSMI-EVIKMDYVNKAFERLEK-NDVRYRFVVDV  350 (357)
Q Consensus       314 ~~~~l~~~i-~~~~~~~~~~a~~~~~~-~~~~Gkvvi~~  350 (357)
                      .+|.+++.+ ++|+++|..++..+... ++..||+|+++
T Consensus       288 ~~g~l~~~i~~~~~l~e~~~a~a~~~~~~~~~GKvvl~~  326 (326)
T COG0604         288 ASGKLKPVIDRVYPLAEAPAAAAHLLLERRTTGKVVLKV  326 (326)
T ss_pred             HcCCCcceeccEechhhhHHHHHHHHcccCCcceEEEeC
Confidence            999999999 89999996655554443 58889999974

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=100.00  E-value=4.8e-50  Score=371.19  Aligned_cols=329  Identities=24%  Similarity=0.372  Sum_probs=280.7

Q ss_pred             eeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCC-CCCCCccCccccEEEEEeCCCCCCCCCC
Q 018382           10 TIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGM-SNYPMVPGHEVVGEVKEVGSEVSNFKVG   88 (357)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~-~~~p~~lG~e~~G~V~~vG~~v~~~~~G   88 (357)
                      |+++++. +++.+++++++.|+|+++||+||+.++++|++|++.+.+.... ..+|.++|||++|+|+++|+++++|++|
T Consensus         1 mka~~~~-~~~~l~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G   79 (339)
T cd08239           1 MRGAVFP-GDRTVELREFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRAPAYQGVIPGHEPAGVVVAVGPGVTHFRVG   79 (339)
T ss_pred             CeEEEEe-cCCceEEEecCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCccCCCCceeccCceEEEEEECCCCccCCCC
Confidence            4667765 5678999999999999999999999999999999998776432 2357899999999999999999999999


Q ss_pred             CEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhhh
Q 018382           89 DKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTV  168 (357)
Q Consensus        89 d~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta  168 (357)
                      |+|++.+. ..||.|..|+.|.++.|.....      ..|...+|+|+||+.++.+.++++|+++++++|+++++++.||
T Consensus        80 d~V~~~~~-~~c~~c~~c~~g~~~~c~~~~~------~~g~~~~G~~ae~~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta  152 (339)
T cd08239          80 DRVMVYHY-VGCGACRNCRRGWMQLCTSKRA------AYGWNRDGGHAEYMLVPEKTLIPLPDDLSFADGALLLCGIGTA  152 (339)
T ss_pred             CEEEECCC-CCCCCChhhhCcCcccCcCccc------ccccCCCCcceeEEEechHHeEECCCCCCHHHhhhhcchHHHH
Confidence            99976544 4699999999999999986543      1233468999999999999999999999999999999999999


Q ss_pred             hhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCe-EEEEeCCcHHHHHHHHhcCCcEEEcCCChh--HHHHhhC--
Q 018382          169 FSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHH-VTVISSSDKKRVEAMEHLGADQYLVSSDAT--RMQEAAD--  243 (357)
Q Consensus       169 ~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~-V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~--~~~~~~~--  243 (357)
                      |+++..+.. ++|++|||+|+|++|++++|+|+..|++ |+++++++++.+.+++ +|+++++++++.+  .+.++..  
T Consensus       153 ~~~l~~~~~-~~g~~vlV~G~G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~-~ga~~~i~~~~~~~~~~~~~~~~~  230 (339)
T cd08239         153 YHALRRVGV-SGRDTVLVVGAGPVGLGALMLARALGAEDVIGVDPSPERLELAKA-LGADFVINSGQDDVQEIRELTSGA  230 (339)
T ss_pred             HHHHHhcCC-CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-hCCCEEEcCCcchHHHHHHHhCCC
Confidence            999977654 8899999999999999999999999998 9999999999888877 9999999887643  2223332  


Q ss_pred             CccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCcccc-hHHHhhccceEEEEeecCHHHHHHHHHHHHhcCCCc--
Q 018382          244 SLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFL-TPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTS--  320 (357)
Q Consensus       244 ~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~-~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~--  320 (357)
                      ++|++||++|+...+..++++++++|+++.+|..... .+. ...++.+++++.+++....++++++++++.++.+++  
T Consensus       231 ~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~g~i~~~~  309 (339)
T cd08239         231 GADVAIECSGNTAARRLALEAVRPWGRLVLVGEGGEL-TIEVSNDLIRKQRTLIGSWYFSVPDMEECAEFLARHKLEVDR  309 (339)
T ss_pred             CCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcCCCCc-ccCcHHHHHhCCCEEEEEecCCHHHHHHHHHHHHcCCCChhH
Confidence            7999999999875567889999999999999875442 333 245678999999999888889999999999999875  


Q ss_pred             cE-EEeecccHHHHHHHHHcCCccEEEEEec
Q 018382          321 MI-EVIKMDYVNKAFERLEKNDVRYRFVVDV  350 (357)
Q Consensus       321 ~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~  350 (357)
                      .+ ++|+++++++||+.++++. .||+++++
T Consensus       310 ~i~~~~~l~~~~~a~~~~~~~~-~gKvvi~~  339 (339)
T cd08239         310 LVTHRFGLDQAPEAYALFAQGE-SGKVVFVF  339 (339)
T ss_pred             eEEEEecHHHHHHHHHHHHcCC-ceEEEEeC
Confidence            56 8999999999999998876 69999864

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=100.00  E-value=5.9e-50  Score=374.68  Aligned_cols=327  Identities=26%  Similarity=0.437  Sum_probs=277.3

Q ss_pred             CCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCCCCEEEEccccC
Q 018382           19 SGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVGVLVG   98 (357)
Q Consensus        19 ~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~   98 (357)
                      ++.+++++++.|+|+++||+||+.++++|++|++++.|..+ ..+|.++|||++|+|+++|+++++|++||||++.+ ..
T Consensus        18 ~~~l~~~~~~~P~~~~~evlV~v~~~gi~~~D~~~~~g~~~-~~~p~i~GhE~~G~V~~vG~~v~~~~~GdrV~~~~-~~   95 (371)
T cd08281          18 SRPLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVINGDRP-RPLPMALGHEAAGVVVEVGEGVTDLEVGDHVVLVF-VP   95 (371)
T ss_pred             CCCceEEEeecCCCCCCeEEEEEEEEeeCccchHhhcCCCC-CCCCccCCccceeEEEEeCCCCCcCCCCCEEEEcc-CC
Confidence            46788999999999999999999999999999999998764 34688999999999999999999999999997644 34


Q ss_pred             CCCCCcccccCcccccccccccC-ccccCCC-------------CCCCCccceEEEeeCcceEECCCCCCccccccccch
Q 018382           99 CCRNCRPCEADVEQYCNKKIWSY-NDVYTDG-------------KPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCA  164 (357)
Q Consensus        99 ~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~-------------~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~  164 (357)
                      .||.|..|+.|.++.|....... .+....|             ....|+|+||+.++++.++++|+++++++|+.++++
T Consensus        96 ~cg~c~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~g~G~~aey~~v~~~~~~~lP~~l~~~~aa~~~~~  175 (371)
T cd08281          96 SCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLRLRGGEINHHLGVSAFAEYAVVSRRSVVKIDKDVPLEIAALFGCA  175 (371)
T ss_pred             CCCCCccccCCCcccccCccccccccccccCcccccccCcccccccCcccceeeEEecccceEECCCCCChHHhhhhcch
Confidence            69999999999999998754221 1110000             112489999999999999999999999999999999


Q ss_pred             hhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHh--
Q 018382          165 GVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEA--  241 (357)
Q Consensus       165 ~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~--  241 (357)
                      +.|||.++.....+++|++|||+|+|++|++++|+|+..|+ +|+++++++++.+.+++ +|+++++++.+.+..+++  
T Consensus       176 ~~ta~~~~~~~~~i~~g~~VlV~G~G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~~-~Ga~~~i~~~~~~~~~~i~~  254 (371)
T cd08281         176 VLTGVGAVVNTAGVRPGQSVAVVGLGGVGLSALLGAVAAGASQVVAVDLNEDKLALARE-LGATATVNAGDPNAVEQVRE  254 (371)
T ss_pred             HHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHH-cCCceEeCCCchhHHHHHHH
Confidence            99999998776677999999999999999999999999999 69999999999888877 999999988765544433  


Q ss_pred             -h-CCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCC--CcccchHHHhhccceEEEEeecC---HHHHHHHHHHHH
Q 018382          242 -A-DSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINT--PMQFLTPMVMLGRKAITGSFIGS---MKETKEMLEFCR  314 (357)
Q Consensus       242 -~-~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~~~~  314 (357)
                       . +++|++|||+|....+..++++++++|+++.+|....  ...++...++.+++++.|++.+.   .++++.+++++.
T Consensus       255 ~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~l~~  334 (371)
T cd08281         255 LTGGGVDYAFEMAGSVPALETAYEITRRGGTTVTAGLPDPEARLSVPALSLVAEERTLKGSYMGSCVPRRDIPRYLALYL  334 (371)
T ss_pred             HhCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEEccCCCCceeeecHHHHhhcCCEEEEEecCCCChHHHHHHHHHHHH
Confidence             2 3799999999976578899999999999999987643  24566667888999999988753   467899999999


Q ss_pred             hcCCCc--cE-EEeecccHHHHHHHHHcCCccEEEEE
Q 018382          315 EKGVTS--MI-EVIKMDYVNKAFERLEKNDVRYRFVV  348 (357)
Q Consensus       315 ~~~l~~--~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi  348 (357)
                      +++++.  .+ ++|+++|+++||+.+++++..||+++
T Consensus       335 ~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~vi~  371 (371)
T cd08281         335 SGRLPVDKLLTHRLPLDEINEGFDRLAAGEAVRQVIL  371 (371)
T ss_pred             cCCCCchhheeeeecHHHHHHHHHHHhCCCceeeeeC
Confidence            999975  46 89999999999999999998888763

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>PLN02740 Alcohol dehydrogenase-like

Probab=100.00  E-value=1.8e-49  Score=372.37  Aligned_cols=342  Identities=25%  Similarity=0.363  Sum_probs=282.4

Q ss_pred             hhhhheeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCC-CCCCCCccCccccEEEEEeCCCCC
Q 018382            5 DTERATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLG-MSNYPMVPGHEVVGEVKEVGSEVS   83 (357)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~-~~~~p~~lG~e~~G~V~~vG~~v~   83 (357)
                      +.|++|+++++.++++++.+++++.|+|+++||+||+.++++|++|++.+.|..+ ...+|.++|||++|+|+++|++++
T Consensus         6 ~~~~~mka~~~~~~~~~~~~~e~~~P~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v~   85 (381)
T PLN02740          6 GKVITCKAAVAWGPGEPLVMEEIRVDPPQKMEVRIKILYTSICHTDLSAWKGENEAQRAYPRILGHEAAGIVESVGEGVE   85 (381)
T ss_pred             ccceeeEEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEecChhhHHHhCCCCcccCCCCccccccceEEEEEeCCCCC
Confidence            3467899998876555688899999999999999999999999999999988754 335688999999999999999999


Q ss_pred             CCCCCCEEEEccccCCCCCCcccccCcccccccccccCccc--cCCC---------------CCCCCccceEEEeeCcce
Q 018382           84 NFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDV--YTDG---------------KPTQGGFAESMVVDQKFV  146 (357)
Q Consensus        84 ~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~---------------~~~~G~~~~~~~v~~~~~  146 (357)
                      +|++||||++.+ ..+||.|.+|..+.++.|+.........  ...|               ....|+|+||++++.+.+
T Consensus        86 ~~~vGdrV~~~~-~~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~  164 (381)
T PLN02740         86 DLKAGDHVIPIF-NGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDSACV  164 (381)
T ss_pred             cCCCCCEEEecC-CCCCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCcccccccCccceeEEEEehHHe
Confidence            999999997654 4579999999999999998864221100  0000               012699999999999999


Q ss_pred             EECCCCCCccccccccchhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcC
Q 018382          147 VKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLG  225 (357)
Q Consensus       147 ~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g  225 (357)
                      +++|+++++++++.+++++.|||+++.....+++|++|||+|+|++|++++|+|+..|+ +|+++++++++.+.+++ +|
T Consensus       165 ~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~~-~G  243 (381)
T PLN02740        165 VKIDPNAPLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFGLGAVGLAVAEGARARGASKIIGVDINPEKFEKGKE-MG  243 (381)
T ss_pred             EECCCCCCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHHH-cC
Confidence            99999999999999999999999988776677999999999999999999999999999 69999999999998877 99


Q ss_pred             CcEEEcCCCh--hH---HHHhhC-CccEEEEcCCCCCChHHHHhccccC-CeEEEEccCCCCc--ccchHHHhhccceEE
Q 018382          226 ADQYLVSSDA--TR---MQEAAD-SLDYIIDTVPANHPLEPYLSLLKLD-GKLILTGVINTPM--QFLTPMVMLGRKAIT  296 (357)
Q Consensus       226 ~~~vv~~~~~--~~---~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~--~~~~~~~~~~~~~i~  296 (357)
                      ++++++.++.  +.   +.++.. ++|++||++|....+..++++++++ |+++.+|......  .+.... +.++.++.
T Consensus       244 a~~~i~~~~~~~~~~~~v~~~~~~g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~~~~~~~~~~-~~~~~~i~  322 (381)
T PLN02740        244 ITDFINPKDSDKPVHERIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTPKMLPLHPME-LFDGRSIT  322 (381)
T ss_pred             CcEEEecccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCCceecccHHH-HhcCCeEE
Confidence            9999987652  22   333333 7999999999865788999999996 9999999765432  233222 34678999


Q ss_pred             EEeecC---HHHHHHHHHHHHhcCCCc--cE-EEeecccHHHHHHHHHcCCccEEEEEec
Q 018382          297 GSFIGS---MKETKEMLEFCREKGVTS--MI-EVIKMDYVNKAFERLEKNDVRYRFVVDV  350 (357)
Q Consensus       297 g~~~~~---~~~~~~~~~~~~~~~l~~--~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~  350 (357)
                      |+..+.   ..+++++++++.++.++.  .+ ++|+|+|+++|++.+.+++. .|++|++
T Consensus       323 g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~e~~~A~~~~~~~~~-~k~~~~~  381 (381)
T PLN02740        323 GSVFGDFKGKSQLPNLAKQCMQGVVNLDGFITHELPFEKINEAFQLLEDGKA-LRCLLHL  381 (381)
T ss_pred             EEecCCCCcHHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHHCCCc-eeEEEeC
Confidence            887654   357889999999998865  56 89999999999999988876 5998864

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=100.00  E-value=2.3e-49  Score=369.08  Aligned_cols=337  Identities=25%  Similarity=0.402  Sum_probs=280.9

Q ss_pred             heeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCCC
Q 018382            9 ATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVG   88 (357)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~G   88 (357)
                      +|+++++...++++++++++.|+|+++||+||+.++++|++|++++.|..+ ..+|.++|||++|+|+++|+++++|++|
T Consensus         1 ~mka~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~g~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~~G   79 (358)
T TIGR03451         1 TVRGVIARSKGAPVELETIVVPDPGPGEVIVDIQACGVCHTDLHYREGGIN-DEFPFLLGHEAAGVVEAVGEGVTDVAPG   79 (358)
T ss_pred             CcEEEEEccCCCCCEEEEEECCCCCCCeEEEEEEEEeecHHHHHHhcCCcc-ccCCcccccceEEEEEEeCCCCcccCCC
Confidence            467777765556789999999999999999999999999999999988754 2468899999999999999999999999


Q ss_pred             CEEEEccccCCCCCCcccccCcccccccccccCccc-cCCCC-----CCCCccceEEEeeCcceEECCCCCCcccccccc
Q 018382           89 DKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDV-YTDGK-----PTQGGFAESMVVDQKFVVKIPDGMALEQAAPLL  162 (357)
Q Consensus        89 d~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-----~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~  162 (357)
                      |||++.+. ..||.|..|..|.+++|.......... ..+|.     ...|+|+||+.++++.++++|+++++++|+.++
T Consensus        80 drV~~~~~-~~cg~c~~c~~g~~~~c~~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~aa~l~  158 (358)
T TIGR03451        80 DYVVLNWR-AVCGQCRACKRGRPWYCFDTHNATQKMTLTDGTELSPALGIGAFAEKTLVHAGQCTKVDPAADPAAAGLLG  158 (358)
T ss_pred             CEEEEccC-CCCCCChHHhCcCcccCcCccccccccccccCcccccccccccccceEEEehhheEECCCCCChhHhhhhc
Confidence            99977654 469999999999999997532111000 00111     136999999999999999999999999999999


Q ss_pred             chhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHH--
Q 018382          163 CAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQ--  239 (357)
Q Consensus       163 ~~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~--  239 (357)
                      +.+.++|.++.....+++|++|||+|+|++|++++|+|+..|+ +|+++++++++.+.+++ +|+++++++++.+..+  
T Consensus       159 ~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~~-~Ga~~~i~~~~~~~~~~i  237 (358)
T TIGR03451       159 CGVMAGLGAAVNTGGVKRGDSVAVIGCGGVGDAAIAGAALAGASKIIAVDIDDRKLEWARE-FGATHTVNSSGTDPVEAI  237 (358)
T ss_pred             ccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH-cCCceEEcCCCcCHHHHH
Confidence            9999999888777777999999999999999999999999999 59999999999888877 9999999887654433  


Q ss_pred             -HhhC--CccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCC--cccchHHHhhccceEEEEeec---CHHHHHHHHH
Q 018382          240 -EAAD--SLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTP--MQFLTPMVMLGRKAITGSFIG---SMKETKEMLE  311 (357)
Q Consensus       240 -~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~~~~~~~~~~~~~~i~g~~~~---~~~~~~~~~~  311 (357)
                       +...  ++|++|||+|....+..++++++++|+++.+|.....  ..++...++.++.++.+++..   ..++++++++
T Consensus       238 ~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  317 (358)
T TIGR03451       238 RALTGGFGADVVIDAVGRPETYKQAFYARDLAGTVVLVGVPTPDMTLELPLLDVFGRGGALKSSWYGDCLPERDFPMLVD  317 (358)
T ss_pred             HHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCceeeccHHHHhhcCCEEEEeecCCCCcHHHHHHHHH
Confidence             3333  6999999999865788999999999999999976542  345566677889999988653   3578899999


Q ss_pred             HHHhcCCCc--cE-EEeecccHHHHHHHHHcCCccEEEEEe
Q 018382          312 FCREKGVTS--MI-EVIKMDYVNKAFERLEKNDVRYRFVVD  349 (357)
Q Consensus       312 ~~~~~~l~~--~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~  349 (357)
                      +++++.+++  .+ ++|+++|+++||+.+++++.. |+++.
T Consensus       318 l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-k~~~~  357 (358)
T TIGR03451       318 LYLQGRLPLDAFVTERIGLDDVEEAFDKMHAGDVL-RSVVE  357 (358)
T ss_pred             HHHcCCCCchheEEEEecHHHHHHHHHHHhCCCcc-eeEEe
Confidence            999999975  46 899999999999999988775 77764

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>PLN02827 Alcohol dehydrogenase-like

Probab=100.00  E-value=2.5e-49  Score=370.55  Aligned_cols=340  Identities=21%  Similarity=0.299  Sum_probs=281.7

Q ss_pred             hhhheeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCC
Q 018382            6 TERATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNF   85 (357)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~   85 (357)
                      ...+|+++++.+++..++++++++|+|+++||+||+.++++|++|++.+.+..   .+|.++|||++|+|+++|+++++|
T Consensus         9 ~~~~mka~~~~~~~~~~~~~e~~~P~~~~~eVlVkv~~~gic~sD~~~~~g~~---~~p~i~GhE~~G~V~~vG~~v~~~   85 (378)
T PLN02827          9 NVITCRAAVAWGAGEALVMEEVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQA---LFPRIFGHEASGIVESIGEGVTEF   85 (378)
T ss_pred             ccceeEEEEEecCCCCceEEEeecCCCCCCEEEEEEEEEecChhHHHHhcCCC---CCCeeecccceEEEEEcCCCCccc
Confidence            34578888888666678999999999999999999999999999999887642   457899999999999999999999


Q ss_pred             CCCCEEEEccccCCCCCCcccccCcccccccccccCcccc---------CCCC-----CCCCccceEEEeeCcceEECCC
Q 018382           86 KVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVY---------TDGK-----PTQGGFAESMVVDQKFVVKIPD  151 (357)
Q Consensus        86 ~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~-----~~~G~~~~~~~v~~~~~~~lP~  151 (357)
                      ++||||++.+. ..||+|.+|..|.++.|+.......+..         ..|.     ...|+|+||+.+++..++++|+
T Consensus        86 ~~GdrV~~~~~-~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~G~~aeyv~v~~~~~~~iP~  164 (378)
T PLN02827         86 EKGDHVLTVFT-GECGSCRHCISGKSNMCQVLGLERKGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVDP  164 (378)
T ss_pred             CCCCEEEEecC-CCCCCChhhhCcCcccccCccccccccccCCCcccccccCcccccccccccceeeEEechhheEECCC
Confidence            99999976644 4799999999999999987532111110         0110     1358999999999999999999


Q ss_pred             CCCccccccccchhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCcEEE
Q 018382          152 GMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGADQYL  230 (357)
Q Consensus       152 ~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~~vv  230 (357)
                      ++++++++.+++++.++|.++.....+++|++|||+|+|++|++++|+|+..|+ .|+++++++++.+.+++ +|+++++
T Consensus       165 ~l~~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a~~-lGa~~~i  243 (378)
T PLN02827        165 LAPLHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFGLGTVGLSVAQGAKLRGASQIIGVDINPEKAEKAKT-FGVTDFI  243 (378)
T ss_pred             CCCHHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHH-cCCcEEE
Confidence            999999999999989999877666667999999999999999999999999999 57777778888888877 9999999


Q ss_pred             cCCCh--hH---HHHhhC-CccEEEEcCCCCCChHHHHhccccC-CeEEEEccCCCCcccch-HHHhhccceEEEEeecC
Q 018382          231 VSSDA--TR---MQEAAD-SLDYIIDTVPANHPLEPYLSLLKLD-GKLILTGVINTPMQFLT-PMVMLGRKAITGSFIGS  302 (357)
Q Consensus       231 ~~~~~--~~---~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~-~~~~~~~~~i~g~~~~~  302 (357)
                      ++++.  +.   +.++.. ++|+|||++|....+..+++.++++ |+++.+|.......+.. ..++.+++++.|+....
T Consensus       244 ~~~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~  323 (378)
T PLN02827        244 NPNDLSEPIQQVIKRMTGGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAKPEVSAHYGLFLSGRTLKGSLFGG  323 (378)
T ss_pred             cccccchHHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCCCccccccHHHHhcCceEEeeecCC
Confidence            87652  22   333333 7999999999865688999999998 99999998654433333 34677899999987653


Q ss_pred             ---HHHHHHHHHHHHhcCCCc--cE-EEeecccHHHHHHHHHcCCccEEEEEecC
Q 018382          303 ---MKETKEMLEFCREKGVTS--MI-EVIKMDYVNKAFERLEKNDVRYRFVVDVA  351 (357)
Q Consensus       303 ---~~~~~~~~~~~~~~~l~~--~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~~  351 (357)
                         .++++.+++++.++++++  .+ ++|+|+++++||+.+++++. +|+||.+.
T Consensus       324 ~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~le~~~~A~~~~~~~~~-~k~vi~~~  377 (378)
T PLN02827        324 WKPKSDLPSLVDKYMNKEIMIDEFITHNLSFDEINKAFELMREGKC-LRCVIHMP  377 (378)
T ss_pred             CchhhhHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHCCCc-eEEEEEec
Confidence               357889999999999997  67 89999999999999999887 69999764

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=100.00  E-value=1.2e-48  Score=365.07  Aligned_cols=337  Identities=21%  Similarity=0.302  Sum_probs=275.1

Q ss_pred             eeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCCCC
Q 018382           10 TIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGD   89 (357)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd   89 (357)
                      |+++.....++.++++++|.|+|.++||+||+.++++|++|++++.|..+...+|.++|||++|+|+++|+++++|++||
T Consensus         2 ~~a~~~~~~~~~l~~~~~~~P~~~~~eVlI~v~a~gi~~sD~~~~~g~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd   81 (368)
T TIGR02818         2 SRAAVAWAAGQPLKIEEVDVEMPQKGEVLVRIVATGVCHTDAFTLSGADPEGVFPVILGHEGAGIVEAVGEGVTSVKVGD   81 (368)
T ss_pred             ceEEEEecCCCCeEEEEecCCCCCCCeEEEEEEEecccHHHHHHhcCCCCCCCCCeeeccccEEEEEEECCCCccCCCCC
Confidence            56777666667899999999999999999999999999999999998776556789999999999999999999999999


Q ss_pred             EEEEccccCCCCCCcccccCccccccccccc-CccccC--------CC-----CCCCCccceEEEeeCcceEECCCCCCc
Q 018382           90 KVGVGVLVGCCRNCRPCEADVEQYCNKKIWS-YNDVYT--------DG-----KPTQGGFAESMVVDQKFVVKIPDGMAL  155 (357)
Q Consensus        90 ~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~--------~~-----~~~~G~~~~~~~v~~~~~~~lP~~l~~  155 (357)
                      ||++.+ ...||+|.+|..|.++.|+..... +.+...        +|     ....|+|+||++++++.++++|+++++
T Consensus        82 rV~~~~-~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~lP~~l~~  160 (368)
T TIGR02818        82 HVIPLY-TAECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKINPAAPL  160 (368)
T ss_pred             EEEEcC-CCCCCCChhhhCCCcccccCcccccccccccCCccccccCCCcccccccCccceeeEEechhheEECCCCCCH
Confidence            997654 457999999999999999874311 011110        11     012479999999999999999999999


Q ss_pred             cccccccchhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCcEEEcCCC
Q 018382          156 EQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGADQYLVSSD  234 (357)
Q Consensus       156 ~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~~vv~~~~  234 (357)
                      ++++++++++.|||+++.....+++|++|||+|+|++|++++|+|+.+|+ +|+++++++++.+.+++ +|++++++.++
T Consensus       161 ~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~~-~Ga~~~i~~~~  239 (368)
T TIGR02818       161 EEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGLGGIGLSVIQGARMAKASRIIAIDINPAKFELAKK-LGATDCVNPND  239 (368)
T ss_pred             HHhhhhcchhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH-hCCCeEEcccc
Confidence            99999999999999998776677999999999999999999999999999 79999999999888877 99999998763


Q ss_pred             --h---hHHHHhhC-CccEEEEcCCCCCChHHHHhccccC-CeEEEEccCCCC--cccchHHHhhccceEEEEeec---C
Q 018382          235 --A---TRMQEAAD-SLDYIIDTVPANHPLEPYLSLLKLD-GKLILTGVINTP--MQFLTPMVMLGRKAITGSFIG---S  302 (357)
Q Consensus       235 --~---~~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~~~~~~~~~~~~~~i~g~~~~---~  302 (357)
                        .   +.+.+++. ++|++||++|....+..++++++++ |+++.+|.....  ..+....++. ...+.++..+   .
T Consensus       240 ~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~  318 (368)
T TIGR02818       240 YDKPIQEVIVEITDGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQEISTRPFQLVT-GRVWRGSAFGGVKG  318 (368)
T ss_pred             cchhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCCCcccccHHHHhc-cceEEEeeccCCCc
Confidence              2   22333333 7999999999865788899999886 999999875422  2333333333 3456776543   2


Q ss_pred             HHHHHHHHHHHHhcCCCc--cE-EEeecccHHHHHHHHHcCCccEEEEEec
Q 018382          303 MKETKEMLEFCREKGVTS--MI-EVIKMDYVNKAFERLEKNDVRYRFVVDV  350 (357)
Q Consensus       303 ~~~~~~~~~~~~~~~l~~--~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~  350 (357)
                      ..+++++++++.++.++.  .+ ++|+|+|+++||+.+++++. +|++|++
T Consensus       319 ~~~~~~~~~~~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~-~k~~v~~  368 (368)
T TIGR02818       319 RTELPGIVEQYMKGEIALDDFVTHTMPLEDINEAFDLMHEGKS-IRTVIHY  368 (368)
T ss_pred             HHHHHHHHHHHHCCCCCchhheeEEecHHHHHHHHHHHhCCCc-eeEEeeC
Confidence            457899999999998864  46 99999999999999988765 6999874

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=100.00  E-value=2.7e-48  Score=363.37  Aligned_cols=336  Identities=23%  Similarity=0.333  Sum_probs=278.4

Q ss_pred             heeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCCC
Q 018382            9 ATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVG   88 (357)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~G   88 (357)
                      +|+++++...+++++++++++|+|+++||+||+.++++|++|++.+.|..+...+|.++|||++|+|+++|+++++|++|
T Consensus         2 ~~ka~~~~~~~~~~~l~~~~~p~~~~~evlIkv~a~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G   81 (369)
T cd08301           2 TCKAAVAWEAGKPLVIEEVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKGQTPLFPRILGHEAAGIVESVGEGVTDLKPG   81 (369)
T ss_pred             ccEEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEeeCchhHHHhcCCCCCCCCCcccccccceEEEEeCCCCCccccC
Confidence            56777776666779999999999999999999999999999999999877655678999999999999999999999999


Q ss_pred             CEEEEccccCCCCCCcccccCcccccccccccC-ccccC---------CC-----CCCCCccceEEEeeCcceEECCCCC
Q 018382           89 DKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSY-NDVYT---------DG-----KPTQGGFAESMVVDQKFVVKIPDGM  153 (357)
Q Consensus        89 d~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~---------~~-----~~~~G~~~~~~~v~~~~~~~lP~~l  153 (357)
                      |||++. ...+||.|..|..+.++.|....... .+...         .|     ....|+|+||+++++..++++|+++
T Consensus        82 drV~~~-~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~~  160 (369)
T cd08301          82 DHVLPV-FTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPEA  160 (369)
T ss_pred             CEEEEc-cCCCCCCCchhcCCCcccCcCcccccccccccCCCccccccCCcceeeeeccccceeEEEEecccEEECCCCC
Confidence            999765 45579999999999999998754221 01000         01     0135899999999999999999999


Q ss_pred             CccccccccchhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCcEEEcC
Q 018382          154 ALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGADQYLVS  232 (357)
Q Consensus       154 ~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~~vv~~  232 (357)
                      ++++++++++.+.|||.++.....+++|++|||+|+|++|++++|+|+..|+ +|+++++++++.+.+++ +|++.+++.
T Consensus       161 ~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~~~-~Ga~~~i~~  239 (369)
T cd08301         161 PLDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGLGAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKK-FGVTEFVNP  239 (369)
T ss_pred             CHHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH-cCCceEEcc
Confidence            9999999999999999988776777999999999999999999999999999 89999999999988877 999999887


Q ss_pred             CC--hhH---HHHhhC-CccEEEEcCCCCCChHHHHhccccC-CeEEEEccCCCC--cccchHHHhhccceEEEEeecC-
Q 018382          233 SD--ATR---MQEAAD-SLDYIIDTVPANHPLEPYLSLLKLD-GKLILTGVINTP--MQFLTPMVMLGRKAITGSFIGS-  302 (357)
Q Consensus       233 ~~--~~~---~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~~~~~~~~~~~~~~i~g~~~~~-  302 (357)
                      .+  .+.   +.++.. ++|++||++|....+..++++++++ |+++.+|.....  ..+....+ .+++++.|++... 
T Consensus       240 ~~~~~~~~~~v~~~~~~~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~  318 (369)
T cd08301         240 KDHDKPVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDAVFSTHPMNL-LNGRTLKGTLFGGY  318 (369)
T ss_pred             cccchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCCCcccccCHHHH-hcCCeEEEEecCCC
Confidence            64  222   333333 7999999999865678899999996 999999986543  23333333 3688999987643 


Q ss_pred             --HHHHHHHHHHHHhcCCCc--cE-EEeecccHHHHHHHHHcCCccEEEEE
Q 018382          303 --MKETKEMLEFCREKGVTS--MI-EVIKMDYVNKAFERLEKNDVRYRFVV  348 (357)
Q Consensus       303 --~~~~~~~~~~~~~~~l~~--~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi  348 (357)
                        .++++++++++.++.++.  .+ ++|+++|+++||+.+++++.. |+++
T Consensus       319 ~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-k~~~  368 (369)
T cd08301         319 KPKTDLPNLVEKYMKKELELEKFITHELPFSEINKAFDLLLKGECL-RCIL  368 (369)
T ss_pred             ChHHHHHHHHHHHHcCCCCcHHheeeeecHHHHHHHHHHHHCCCce-eEEe
Confidence              357889999999998764  46 899999999999999998874 8876

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase

Probab=100.00  E-value=4.5e-48  Score=361.17  Aligned_cols=337  Identities=25%  Similarity=0.394  Sum_probs=279.4

Q ss_pred             hheeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCC
Q 018382            8 RATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKV   87 (357)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~   87 (357)
                      ++++++++...+++++++++|.|.|.++||+||+.++++|++|++.+.|..+ ..+|.++|||++|+|+++|+++++|++
T Consensus         1 ~~~ka~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~gi~~sD~~~~~g~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~~   79 (365)
T cd08277           1 IKCKAAVAWEAGKPLVIEEIEVAPPKANEVRIKMLATSVCHTDILAIEGFKA-TLFPVILGHEGAGIVESVGEGVTNLKP   79 (365)
T ss_pred             CccEEEEEccCCCCcEEEEEECCCCCCCEEEEEEEEEeechhhHHHhcCCCC-CCCCeecccceeEEEEeeCCCCccCCC
Confidence            4677887776667799999999999999999999999999999999988765 456889999999999999999999999


Q ss_pred             CCEEEEccccCCCCCCcccccCcccccccccccCccccCCC-------------CCCCCccceEEEeeCcceEECCCCCC
Q 018382           88 GDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDG-------------KPTQGGFAESMVVDQKFVVKIPDGMA  154 (357)
Q Consensus        88 Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~G~~~~~~~v~~~~~~~lP~~l~  154 (357)
                      ||+|++. ...+|+.|..|..|.++.|++..+...+...++             ....|+|+||++++.+.++++|++++
T Consensus        80 GdrV~~~-~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~ae~~~v~~~~~~~lP~~l~  158 (365)
T cd08277          80 GDKVIPL-FIGQCGECSNCRSGKTNLCQKYRANESGLMPDGTSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDPAAP  158 (365)
T ss_pred             CCEEEEC-CCCCCCCCchhcCcCcccCcCccccccccccCCccccccCCcccccccccccceeeEEEchhheEECCCCCC
Confidence            9999654 556899999999999999998654433322221             11358999999999999999999999


Q ss_pred             ccccccccchhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCcEEEcCC
Q 018382          155 LEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGADQYLVSS  233 (357)
Q Consensus       155 ~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~~vv~~~  233 (357)
                      +++++++++++.|||+++.....+++|++|||+|+|++|++++|+|+..|+ +|+++++++++.+.+++ +|++++++..
T Consensus       159 ~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~~~-~ga~~~i~~~  237 (365)
T cd08277         159 LEHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGLGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKE-FGATDFINPK  237 (365)
T ss_pred             HHHhhHhcchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH-cCCCcEeccc
Confidence            999999999999999988666677999999999999999999999999999 79999999999888877 9999998876


Q ss_pred             Ch-----hHHHHhh-CCccEEEEcCCCCCChHHHHhccccC-CeEEEEccCCC-CcccchHHHhhccceEEEEeecC---
Q 018382          234 DA-----TRMQEAA-DSLDYIIDTVPANHPLEPYLSLLKLD-GKLILTGVINT-PMQFLTPMVMLGRKAITGSFIGS---  302 (357)
Q Consensus       234 ~~-----~~~~~~~-~~~d~v~d~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~---  302 (357)
                      +.     +.+.+.. .++|+|||++|....+..++++++++ |+++.+|...+ ...++...++. +.++.+++.+.   
T Consensus       238 ~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~i~g~~~~~~~~  316 (365)
T cd08277         238 DSDKPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPGAELSIRPFQLIL-GRTWKGSFFGGFKS  316 (365)
T ss_pred             cccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCccccccCHhHHhh-CCEEEeeecCCCCh
Confidence            42     2233333 37999999999765778899999885 99999987653 23444444443 78888887754   


Q ss_pred             HHHHHHHHHHHHhcCCC--ccE-EEeecccHHHHHHHHHcCCccEEEEEe
Q 018382          303 MKETKEMLEFCREKGVT--SMI-EVIKMDYVNKAFERLEKNDVRYRFVVD  349 (357)
Q Consensus       303 ~~~~~~~~~~~~~~~l~--~~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~  349 (357)
                      ..++.++++++.++.+.  +.+ ++|+++|+++|++.+++++. .|+++.
T Consensus       317 ~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-~k~~i~  365 (365)
T cd08277         317 RSDVPKLVSKYMNKKFDLDELITHVLPFEEINKGFDLMKSGEC-IRTVIT  365 (365)
T ss_pred             HHHHHHHHHHHHCCCcChhHheeeEEchhhHHHHHHHHHCCCC-ceEeeC
Confidence            35788999999998765  456 89999999999999988874 688863

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=100.00  E-value=9.6e-48  Score=359.36  Aligned_cols=337  Identities=24%  Similarity=0.323  Sum_probs=275.1

Q ss_pred             heeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCCC
Q 018382            9 ATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVG   88 (357)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~G   88 (357)
                      +|+++.....+++++++++|.|+|+++||+||+.++++|++|++++.|..+...+|.++|||++|+|+++|+++++|++|
T Consensus         2 ~~~a~~~~~~~~~~~~~~~~~P~~~~~eVlIrv~a~gi~~~D~~~~~g~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~vG   81 (368)
T cd08300           2 TCKAAVAWEAGKPLSIEEVEVAPPKAGEVRIKILATGVCHTDAYTLSGADPEGLFPVILGHEGAGIVESVGEGVTSVKPG   81 (368)
T ss_pred             cceEEEEecCCCCcEEEEeecCCCCCCEEEEEEEEEEechhhHHHhcCCCccCCCCceeccceeEEEEEeCCCCccCCCC
Confidence            46677666666789999999999999999999999999999999999877655788999999999999999999999999


Q ss_pred             CEEEEccccCCCCCCcccccCccccccccccc-CccccCCC-------------CCCCCccceEEEeeCcceEECCCCCC
Q 018382           89 DKVGVGVLVGCCRNCRPCEADVEQYCNKKIWS-YNDVYTDG-------------KPTQGGFAESMVVDQKFVVKIPDGMA  154 (357)
Q Consensus        89 d~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~-------------~~~~G~~~~~~~v~~~~~~~lP~~l~  154 (357)
                      |||++. ....||.|.+|..+.++.|.+.... +.+...+|             ....|+|+||+.++++.++++|++++
T Consensus        82 drV~~~-~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l~  160 (368)
T cd08300          82 DHVIPL-YTPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFSCKGKPIYHFMGTSTFSEYTVVAEISVAKINPEAP  160 (368)
T ss_pred             CEEEEc-CCCCCCCChhhcCCCcCcCCCccccccccccCCCccccccCCcccccccccccceeEEEEchhceEeCCCCCC
Confidence            999765 4467999999999999999865311 11111111             11357999999999999999999999


Q ss_pred             ccccccccchhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCcEEEcCC
Q 018382          155 LEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGADQYLVSS  233 (357)
Q Consensus       155 ~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~~vv~~~  233 (357)
                      +++++.+++++.|||+++.....+++|++|||+|+|++|++++|+|+..|+ +|+++++++++.+.+++ +|++++++++
T Consensus       161 ~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~~~-lGa~~~i~~~  239 (368)
T cd08300         161 LDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGLGAVGLAVIQGAKAAGASRIIGIDINPDKFELAKK-FGATDCVNPK  239 (368)
T ss_pred             hhhhhhhccchhhhHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH-cCCCEEEccc
Confidence            999999999999999998776677999999999999999999999999999 79999999999988876 9999999876


Q ss_pred             Ch--hH---HHHhhC-CccEEEEcCCCCCChHHHHhccccC-CeEEEEccCCCC--cccchHHHhhccceEEEEeec---
Q 018382          234 DA--TR---MQEAAD-SLDYIIDTVPANHPLEPYLSLLKLD-GKLILTGVINTP--MQFLTPMVMLGRKAITGSFIG---  301 (357)
Q Consensus       234 ~~--~~---~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~~~~~~~~~~~~~~i~g~~~~---  301 (357)
                      +.  +.   +.+++. ++|+|||++|....+..++++++++ |+++.+|.....  .......++ ...++.++..+   
T Consensus       240 ~~~~~~~~~v~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~  318 (368)
T cd08300         240 DHDKPIQQVLVEMTDGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQEISTRPFQLV-TGRVWKGTAFGGWK  318 (368)
T ss_pred             ccchHHHHHHHHHhCCCCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCCCccccCHHHHh-hcCeEEEEEecccC
Confidence            53  22   333333 7999999999865788899999886 999999876422  222333333 23456665543   


Q ss_pred             CHHHHHHHHHHHHhcCCCc--cE-EEeecccHHHHHHHHHcCCccEEEEEe
Q 018382          302 SMKETKEMLEFCREKGVTS--MI-EVIKMDYVNKAFERLEKNDVRYRFVVD  349 (357)
Q Consensus       302 ~~~~~~~~~~~~~~~~l~~--~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~  349 (357)
                      ..++++++++++.++.+++  .+ ++|+|+|+++||+.+.+++. .|++++
T Consensus       319 ~~~~~~~~~~~~~~g~l~~~~~i~~~~~le~~~~A~~~~~~~~~-~k~~~~  368 (368)
T cd08300         319 SRSQVPKLVEDYMKGKIKVDEFITHTMPLDEINEAFDLMHAGKS-IRTVVK  368 (368)
T ss_pred             cHHHHHHHHHHHHcCCCChhhceeeeEcHHHHHHHHHHHhCCCC-ceeeeC
Confidence            3467899999999999985  46 89999999999999988775 588874

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=100.00  E-value=6.9e-48  Score=357.88  Aligned_cols=321  Identities=24%  Similarity=0.357  Sum_probs=273.9

Q ss_pred             CCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcC-CCCCCCCCccCccccEEEEEeCCCCCCCCCCCEEEEcccc
Q 018382           19 SGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKND-LGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVGVLV   97 (357)
Q Consensus        19 ~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~-~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~   97 (357)
                      +.+++++++|.|+|+++||+||+.++++|++|++.+.+. .+...+|.++|||++|+|+++|++++.+ +||+|++.+..
T Consensus         8 g~~~~~~~~p~P~~~~~evlVrv~~~gic~sD~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~-~GdrV~~~~~~   86 (349)
T TIGR03201         8 GKPMVKTRVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVRTNHALPLALGHEISGRVIQAGAGAASW-IGKAVIVPAVI   86 (349)
T ss_pred             CCCceEEeccCCCCCCCeEEEEEEEEeecccchHHHcCCCCccCCCCeeccccceEEEEEeCCCcCCC-CCCEEEECCCC
Confidence            345888999999999999999999999999999987443 2234568899999999999999999887 99999766544


Q ss_pred             CCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCC------CCCccccccccchhhhhhhh
Q 018382           98 GCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPD------GMALEQAAPLLCAGVTVFSP  171 (357)
Q Consensus        98 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~------~l~~~~aa~~~~~~~ta~~~  171 (357)
                       +||.|..|..|.++.|....+.       |...+|+|+||+.++++.++++|+      ++++++++++++.+.++|++
T Consensus        87 -~cg~c~~c~~g~~~~c~~~~~~-------g~~~~G~~ae~~~v~~~~~~~ip~~~~~~~~~~~~~~a~~~~~~~ta~~a  158 (349)
T TIGR03201        87 -PCGECELCKTGRGTICRAQKMP-------GNDMQGGFASHIVVPAKGLCVVDEARLAAAGLPLEHVSVVADAVTTPYQA  158 (349)
T ss_pred             -CCCCChhhhCcCcccCCCCCcc-------CcCCCCcccceEEechHHeEECCcccccccCCCHHHhhhhcchHHHHHHH
Confidence             7999999999999999865432       233579999999999999999999      89999999999999999999


Q ss_pred             hhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCCh---hHH---HHhhC--
Q 018382          172 LSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDA---TRM---QEAAD--  243 (357)
Q Consensus       172 l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~---~~~---~~~~~--  243 (357)
                      +... .+++|++|+|+|+|++|++++|+|+..|++|+++++++++.+.+++ +|++++++..+.   +..   ++++.  
T Consensus       159 ~~~~-~~~~g~~VlV~G~G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~~~-~Ga~~~i~~~~~~~~~~~~~~~~~t~~~  236 (349)
T TIGR03201       159 AVQA-GLKKGDLVIVIGAGGVGGYMVQTAKAMGAAVVAIDIDPEKLEMMKG-FGADLTLNPKDKSAREVKKLIKAFAKAR  236 (349)
T ss_pred             HHhc-CCCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHH-hCCceEecCccccHHHHHHHHHhhcccC
Confidence            8764 4589999999999999999999999999999999999999988877 999999887653   222   23332  


Q ss_pred             Ccc----EEEEcCCCCCChHHHHhccccCCeEEEEccCCCCcccchHHHhhccceEEEEeecCHHHHHHHHHHHHhcCCC
Q 018382          244 SLD----YIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVT  319 (357)
Q Consensus       244 ~~d----~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~  319 (357)
                      ++|    +||||+|....+..++++++++|+++.+|.......++...++.++.++.+++....++++.++++++++.++
T Consensus       237 g~d~~~d~v~d~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~g~i~  316 (349)
T TIGR03201       237 GLRSTGWKIFECSGSKPGQESALSLLSHGGTLVVVGYTMAKTEYRLSNLMAFHARALGNWGCPPDRYPAALDLVLDGKIQ  316 (349)
T ss_pred             CCCCCcCEEEECCCChHHHHHHHHHHhcCCeEEEECcCCCCcccCHHHHhhcccEEEEEecCCHHHHHHHHHHHHcCCCC
Confidence            565    8999999875677889999999999999987655556666777788899999887778899999999999987


Q ss_pred             c--cEEEeecccHHHHHHHHHcCCccEEEEEec
Q 018382          320 S--MIEVIKMDYVNKAFERLEKNDVRYRFVVDV  350 (357)
Q Consensus       320 ~--~i~~~~~~~~~~a~~~~~~~~~~Gkvvi~~  350 (357)
                      +  .+++|+|+++++||+.+++++..||+++++
T Consensus       317 ~~~~i~~~~l~~~~~A~~~~~~~~~~~k~~~~~  349 (349)
T TIGR03201       317 LGPFVERRPLDQIEHVFAAAHHHKLKRRAILTP  349 (349)
T ss_pred             cccceEEecHHHHHHHHHHHHcCCccceEEecC
Confidence            5  458899999999999999999889998853

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

Probab=100.00  E-value=5.5e-48  Score=356.25  Aligned_cols=334  Identities=26%  Similarity=0.355  Sum_probs=269.5

Q ss_pred             eehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCC-ccCccccEEEEEeCCCCCCCCCCCE
Q 018382           12 GWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPM-VPGHEVVGEVKEVGSEVSNFKVGDK   90 (357)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~-~lG~e~~G~V~~vG~~v~~~~~Gd~   90 (357)
                      +...+.+.+...+++.+.|.+.++||+|||.++++|++|+++++|..+....+. ++|||++|+|+++| .++.|++|||
T Consensus         3 a~~~~~~~~~~~~~~~~~p~~~p~~vlVkv~~~gICGSDlh~~~g~~~~~~~~~~i~GHE~~G~V~evG-~~~~~~~Gdr   81 (350)
T COG1063           3 AAVVYVGGGDVRLEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPFVPPGDIILGHEFVGEVVEVG-VVRGFKVGDR   81 (350)
T ss_pred             eeEEEecCCccccccCCCCCCCCCeEEEEEEEEeEchhhhhhccCCCCCCCCCCcccCccceEEEEEec-cccCCCCCCE
Confidence            344443444444677777778999999999999999999999999877666666 99999999999999 7788999999


Q ss_pred             EEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEE-CCCCCCccccccccchhhhhh
Q 018382           91 VGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVK-IPDGMALEQAAPLLCAGVTVF  169 (357)
Q Consensus        91 V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~-lP~~l~~~~aa~~~~~~~ta~  169 (357)
                      |++.+. .+||.|.+|+.|.++.|++..+.+....  +...+|+|+||+.+|.+.+++ +|+++ ..+++++...+.+++
T Consensus        82 Vvv~~~-~~Cg~C~~C~~G~~~~C~~~~~~g~~~~--~~~~~G~~aEyv~vp~~~~~~~~pd~~-~~~~aal~epla~~~  157 (350)
T COG1063          82 VVVEPN-IPCGHCRYCRAGEYNLCENPGFYGYAGL--GGGIDGGFAEYVRVPADFNLAKLPDGI-DEEAAALTEPLATAY  157 (350)
T ss_pred             EEECCC-cCCCCChhHhCcCcccCCCccccccccc--cCCCCCceEEEEEeccccCeecCCCCC-ChhhhhhcChhhhhh
Confidence            977655 4599999999999999995542222211  122689999999999765555 58888 667777888999997


Q ss_pred             hhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCcEEEcCCChh---HHHHhhC--
Q 018382          170 SPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGADQYLVSSDAT---RMQEAAD--  243 (357)
Q Consensus       170 ~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~---~~~~~~~--  243 (357)
                      ++........++.+|+|+|+|++|++++++++..|+ +|++++.+++|++.+++.+|++.+++.....   .+.++++  
T Consensus       158 ~~~a~~~~~~~~~~V~V~GaGpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~~~~~~~~~~~~~~t~g~  237 (350)
T COG1063         158 HGHAERAAVRPGGTVVVVGAGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNPSEDDAGAEILELTGGR  237 (350)
T ss_pred             hhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCeEeecCccccHHHHHHHHhCCC
Confidence            773333332566699999999999999999999998 8888899999999998866777777665422   2334444  


Q ss_pred             CccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCc-ccchHHHhhccceEEEEee-cCHHHHHHHHHHHHhcCCCc-
Q 018382          244 SLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPM-QFLTPMVMLGRKAITGSFI-GSMKETKEMLEFCREKGVTS-  320 (357)
Q Consensus       244 ~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~i~g~~~-~~~~~~~~~~~~~~~~~l~~-  320 (357)
                      ++|++|||+|....+..+++.++++|+++.+|...... .++...++.+++++.|+.. ....+|+.+++++.+|++.+ 
T Consensus       238 g~D~vie~~G~~~~~~~ai~~~r~gG~v~~vGv~~~~~~~~~~~~~~~kel~l~gs~~~~~~~~~~~~~~ll~~g~i~~~  317 (350)
T COG1063         238 GADVVIEAVGSPPALDQALEALRPGGTVVVVGVYGGEDIPLPAGLVVSKELTLRGSLRPSGREDFERALDLLASGKIDPE  317 (350)
T ss_pred             CCCEEEECCCCHHHHHHHHHHhcCCCEEEEEeccCCccCccCHHHHHhcccEEEeccCCCCcccHHHHHHHHHcCCCChh
Confidence            69999999998767899999999999999999987665 5778889999999999965 55678999999999999987 


Q ss_pred             -cE-EEeecccHHHHHHHHHcCCc-cEEEEEec
Q 018382          321 -MI-EVIKMDYVNKAFERLEKNDV-RYRFVVDV  350 (357)
Q Consensus       321 -~i-~~~~~~~~~~a~~~~~~~~~-~Gkvvi~~  350 (357)
                       .+ +.++++++++||+.+.+++. ..|+++.+
T Consensus       318 ~lit~~~~~~~~~~a~~~~~~~~~~~~Kv~i~~  350 (350)
T COG1063         318 KLITHRLPLDDAAEAYELFADRKEEAIKVVLKP  350 (350)
T ss_pred             HceEeeccHHHHHHHHHHHHhcCCCeEEEEecC
Confidence             45 89999999999999988655 45888753

>cd08230 glucose_DH Glucose dehydrogenase

Probab=100.00  E-value=6.5e-48  Score=358.98  Aligned_cols=328  Identities=23%  Similarity=0.307  Sum_probs=259.8

Q ss_pred             eeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCC---CCCCCccCccccEEEEEeCCCCCCCCC
Q 018382           11 IGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGM---SNYPMVPGHEVVGEVKEVGSEVSNFKV   87 (357)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~---~~~p~~lG~e~~G~V~~vG~~v~~~~~   87 (357)
                      +++++..+..+++++++|.|+|+++|||||++++++|++|++.++|.++.   ..+|.++|||++|+|+++|++ ++|++
T Consensus         2 ka~~~~~~~~~l~~~~~p~p~~~~~evlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~i~G~e~~G~V~~vG~~-~~~~v   80 (355)
T cd08230           2 KAIAVKPGKPGVRVVDIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDFLVLGHEALGVVEEVGDG-SGLSP   80 (355)
T ss_pred             ceeEecCCCCCCeEEeCCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCCCCCCCCCeeeccccceEEEEecCC-CCCCC
Confidence            45555433334889999999999999999999999999999999987542   245789999999999999999 99999


Q ss_pred             CCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhh
Q 018382           88 GDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVT  167 (357)
Q Consensus        88 Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~t  167 (357)
                      ||||++.+ ...||+|..|+.|.++.|....+...+.    ...+|+|+||++++++.++++|++++ + ++++..++.+
T Consensus        81 GdrV~~~~-~~~cg~C~~c~~g~~~~c~~~~~~~~g~----~~~~G~~aey~~~~~~~~~~~P~~~~-~-~a~~~~p~~~  153 (355)
T cd08230          81 GDLVVPTV-RRPPGKCLNCRIGRPDFCETGEYTERGI----KGLHGFMREYFVDDPEYLVKVPPSLA-D-VGVLLEPLSV  153 (355)
T ss_pred             CCEEEecc-ccCCCcChhhhCcCcccCCCcceeccCc----CCCCccceeEEEeccccEEECCCCCC-c-ceeecchHHH
Confidence            99997654 4469999999999999998754322211    12479999999999999999999999 4 4445555555


Q ss_pred             hhhhhhcc------CCCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeC---CcHHHHHHHHhcCCcEEEcCCChhHH
Q 018382          168 VFSPLSHF------GLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISS---SDKKRVEAMEHLGADQYLVSSDATRM  238 (357)
Q Consensus       168 a~~~l~~~------~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~---~~~~~~~~~~~~g~~~vv~~~~~~~~  238 (357)
                      ++.++...      ...++|++|+|+|+|++|++++|+|+..|++|+++++   ++++.+.+++ +|+++ +++.+.+..
T Consensus       154 ~~~a~~~~~~~~~~~~~~~g~~vlI~G~G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~~~~~-~Ga~~-v~~~~~~~~  231 (355)
T cd08230         154 VEKAIEQAEAVQKRLPTWNPRRALVLGAGPIGLLAALLLRLRGFEVYVLNRRDPPDPKADIVEE-LGATY-VNSSKTPVA  231 (355)
T ss_pred             HHHHHHHHhhhhhhcccCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHH-cCCEE-ecCCccchh
Confidence            44443221      1236899999999999999999999999999999987   5677777776 99987 455543322


Q ss_pred             H-HhhCCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCC--Ccccc----hHHHhhccceEEEEeecCHHHHHHHHH
Q 018382          239 Q-EAADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINT--PMQFL----TPMVMLGRKAITGSFIGSMKETKEMLE  311 (357)
Q Consensus       239 ~-~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~----~~~~~~~~~~i~g~~~~~~~~~~~~~~  311 (357)
                      + ....++|+|||++|....+..++++++++|+++.+|...+  ...++    ...++.+++++.|+...+.++++++++
T Consensus       232 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~  311 (355)
T cd08230         232 EVKLVGEFDLIIEATGVPPLAFEALPALAPNGVVILFGVPGGGREFEVDGGELNRDLVLGNKALVGSVNANKRHFEQAVE  311 (355)
T ss_pred             hhhhcCCCCEEEECcCCHHHHHHHHHHccCCcEEEEEecCCCCCccccChhhhhhhHhhcCcEEEEecCCchhhHHHHHH
Confidence            1 1234799999999986578899999999999999998665  23343    345678999999998888888999999


Q ss_pred             HHHhcC------CCccE-EEeecccHHHHHHHHHcCCccEEEEEec
Q 018382          312 FCREKG------VTSMI-EVIKMDYVNKAFERLEKNDVRYRFVVDV  350 (357)
Q Consensus       312 ~~~~~~------l~~~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~  350 (357)
                      ++.++.      +++.+ ++|+++|+.+||+.++++.  +|+++++
T Consensus       312 ~l~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~--~K~v~~~  355 (355)
T cd08230         312 DLAQWKYRWPGVLERLITRRVPLEEFAEALTEKPDGE--IKVVIEW  355 (355)
T ss_pred             HHHhcccccccchHHheeeeecHHHHHHHHHhcccCC--eEEEeeC
Confidence            999876      45567 8999999999999887654  5999864

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=5.6e-47  Score=349.80  Aligned_cols=331  Identities=32%  Similarity=0.568  Sum_probs=290.0

Q ss_pred             eeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCCCC
Q 018382           10 TIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGD   89 (357)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd   89 (357)
                      |+++++..+++++++++++.|++.++||+||+.++++|++|++.+.|..+...+|.++|||++|+|+++|+++++|++||
T Consensus         1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd   80 (333)
T cd08296           1 YKAVQVTEPGGPLELVERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAMPGLSYPRVPGHEVVGRIDAVGEGVSRWKVGD   80 (333)
T ss_pred             CeEEEEccCCCCceEEeccCCCCCCCEEEEEEEEEecchHHHHHHhCCCCCCCCCcccCcceeEEEEEECCCCccCCCCC
Confidence            46777765546899999999999999999999999999999999988765445688999999999999999999999999


Q ss_pred             EEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhhhh
Q 018382           90 KVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVF  169 (357)
Q Consensus        90 ~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~  169 (357)
                      +|++.+...+||+|..|..|.++.|..+...       +....|++++|+.++...++++|+++++++++.+++.+.+||
T Consensus        81 ~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~~-------~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~  153 (333)
T cd08296          81 RVGVGWHGGHCGTCDACRRGDFVHCENGKVT-------GVTRDGGYAEYMLAPAEALARIPDDLDAAEAAPLLCAGVTTF  153 (333)
T ss_pred             EEEeccccCCCCCChhhhCcCcccCCCCCcc-------CcccCCcceeEEEEchhheEeCCCCCCHHHhhhhhhhhHHHH
Confidence            9988777788999999999999999876432       223469999999999999999999999999999999999999


Q ss_pred             hhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhh--CCccE
Q 018382          170 SPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAA--DSLDY  247 (357)
Q Consensus       170 ~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~--~~~d~  247 (357)
                      .++... .++++++|||+|+|++|++++++|+.+|++|+++++++++.+.+++ +|+++++++...+....+.  .++|+
T Consensus       154 ~~~~~~-~~~~~~~vlV~g~g~iG~~~~~~a~~~G~~vi~~~~~~~~~~~~~~-~g~~~~i~~~~~~~~~~~~~~~~~d~  231 (333)
T cd08296         154 NALRNS-GAKPGDLVAVQGIGGLGHLAVQYAAKMGFRTVAISRGSDKADLARK-LGAHHYIDTSKEDVAEALQELGGAKL  231 (333)
T ss_pred             HHHHhc-CCCCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHH-cCCcEEecCCCccHHHHHHhcCCCCE
Confidence            999777 6699999999999999999999999999999999999999888876 9999999887654433332  47999


Q ss_pred             EEEcCCCCCChHHHHhccccCCeEEEEccCCCCcccchHHHhhccceEEEEeecCHHHHHHHHHHHHhcCCCccEEEeec
Q 018382          248 IIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEVIKM  327 (357)
Q Consensus       248 v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~  327 (357)
                      ++|+.|....+..++++++++|+++.+|.......++...++.++.++.++..+..+++..+++++.++.+++.+++|++
T Consensus       232 vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~  311 (333)
T cd08296         232 ILATAPNAKAISALVGGLAPRGKLLILGAAGEPVAVSPLQLIMGRKSIHGWPSGTALDSEDTLKFSALHGVRPMVETFPL  311 (333)
T ss_pred             EEECCCchHHHHHHHHHcccCCEEEEEecCCCCCCcCHHHHhhcccEEEEeCcCCHHHHHHHHHHHHhCCCCceEEEEEH
Confidence            99998755478899999999999999988765555666667789999999988777889999999999999877788999


Q ss_pred             ccHHHHHHHHHcCCccEEEEEe
Q 018382          328 DYVNKAFERLEKNDVRYRFVVD  349 (357)
Q Consensus       328 ~~~~~a~~~~~~~~~~Gkvvi~  349 (357)
                      +++.+|++.+++++.+||+|++
T Consensus       312 ~~~~~a~~~~~~~~~~gk~v~~  333 (333)
T cd08296         312 EKANEAYDRMMSGKARFRVVLT  333 (333)
T ss_pred             HHHHHHHHHHHCCCCceeEEeC
Confidence            9999999999999999999874

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal

>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]

Probab=100.00  E-value=5.7e-48  Score=320.82  Aligned_cols=314  Identities=22%  Similarity=0.258  Sum_probs=272.1

Q ss_pred             hhhhheeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCC
Q 018382            5 DTERATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSN   84 (357)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~   84 (357)
                      ++..+...+.-.++...+++++.|.|+|.++|++||..|+|+|..|..+++|.+...+.|.++|.|.+|+|+++|+.+++
T Consensus         6 p~~~k~i~v~e~Ggydvlk~ed~pv~~papgel~iknka~GlNfid~y~RkGlY~~~plPytpGmEaaGvVvAvG~gvtd   85 (336)
T KOG1197|consen    6 PPLLKCIVVTEFGGYDVLKLEDRPVPPPAPGELTIKNKACGLNFIDLYFRKGLYDPAPLPYTPGMEAAGVVVAVGEGVTD   85 (336)
T ss_pred             CchheEEEEeccCCcceEEEeeecCCCCCCCceEEeehhcCccHHHHHHhccccCCCCCCcCCCcccceEEEEecCCccc
Confidence            34445556666777788999999999999999999999999999999999999977789999999999999999999999


Q ss_pred             CCCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccch
Q 018382           85 FKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCA  164 (357)
Q Consensus        85 ~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~  164 (357)
                      +++||||+..                                   +..|.|+|+..+|...++++|+.+++.+||++...
T Consensus        86 rkvGDrVayl-----------------------------------~~~g~yaee~~vP~~kv~~vpe~i~~k~aaa~llq  130 (336)
T KOG1197|consen   86 RKVGDRVAYL-----------------------------------NPFGAYAEEVTVPSVKVFKVPEAITLKEAAALLLQ  130 (336)
T ss_pred             cccccEEEEe-----------------------------------ccchhhheeccccceeeccCCcccCHHHHHHHHHH
Confidence            9999999754                                   36899999999999999999999999999999999


Q ss_pred             hhhhhhhhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhC
Q 018382          165 GVTVFSPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAAD  243 (357)
Q Consensus       165 ~~ta~~~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~  243 (357)
                      ++|||.-++++..+++|++||++.+ |++|+++.|+++..|+.++.+++++++.+.+++ .|++|.++++.+++++++..
T Consensus       131 ~lTAy~ll~e~y~vkpGhtVlvhaAAGGVGlll~Ql~ra~~a~tI~~asTaeK~~~ake-nG~~h~I~y~~eD~v~~V~k  209 (336)
T KOG1197|consen  131 GLTAYMLLFEAYNVKPGHTVLVHAAAGGVGLLLCQLLRAVGAHTIATASTAEKHEIAKE-NGAEHPIDYSTEDYVDEVKK  209 (336)
T ss_pred             HHHHHHHHHHhcCCCCCCEEEEEeccccHHHHHHHHHHhcCcEEEEEeccHHHHHHHHh-cCCcceeeccchhHHHHHHh
Confidence            9999999999999999999999965 999999999999999999999999999999988 99999999999888776642


Q ss_pred             -----CccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCcc-cchHHHhhccce-----EEEEeecCHHH---HHHH
Q 018382          244 -----SLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQ-FLTPMVMLGRKA-----ITGSFIGSMKE---TKEM  309 (357)
Q Consensus       244 -----~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~-~~~~~~~~~~~~-----i~g~~~~~~~~---~~~~  309 (357)
                           |+|+++|++|.. .+...+.+|++.|.+|.+|+.++..+ +++..+--+.++     +.|..-+..+.   ..++
T Consensus       210 iTngKGVd~vyDsvG~d-t~~~sl~~Lk~~G~mVSfG~asgl~~p~~l~~ls~k~l~lvrpsl~gYi~g~~el~~~v~rl  288 (336)
T KOG1197|consen  210 ITNGKGVDAVYDSVGKD-TFAKSLAALKPMGKMVSFGNASGLIDPIPLNQLSPKALQLVRPSLLGYIDGEVELVSYVARL  288 (336)
T ss_pred             ccCCCCceeeeccccch-hhHHHHHHhccCceEEEeccccCCCCCeehhhcChhhhhhccHhhhcccCCHHHHHHHHHHH
Confidence                 899999999998 89999999999999999999876533 333333233333     22222222121   2567


Q ss_pred             HHHHHhcCCCccE-EEeecccHHHHHHHHHcCCccEEEEEecCCCcC
Q 018382          310 LEFCREKGVTSMI-EVIKMDYVNKAFERLEKNDVRYRFVVDVAGSKL  355 (357)
Q Consensus       310 ~~~~~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~~~~~~  355 (357)
                      +.++.++.|+..| ++|||+++.+|+..+++++..||+++...++..
T Consensus       289 ~alvnsg~lk~~I~~~ypls~vadA~~diesrktvGkvlLlp~~~~~  335 (336)
T KOG1197|consen  289 FALVNSGHLKIHIDHVYPLSKVADAHADIESRKTVGKVLLLPGPEKE  335 (336)
T ss_pred             HHHhhcCccceeeeeecchHHHHHHHHHHHhhhccceEEEeCCcccc
Confidence            7788899999999 999999999999999999999999999877643

>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent

Probab=100.00  E-value=1.9e-46  Score=351.73  Aligned_cols=335  Identities=20%  Similarity=0.260  Sum_probs=259.3

Q ss_pred             eeeehccCCCCCcceeeeecCCCC-------CCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCC
Q 018382           10 TIGWAAKDPSGILSPYTYTLRNTG-------AEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEV   82 (357)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~p~~~-------~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v   82 (357)
                      |+++++. +++.++++++|.|+|+       ++|||||+.++++|++|++++.|..+ ..+|.++|||++|+|+++|++|
T Consensus         3 mka~v~~-~~~~~~~~e~~~P~~~~~~~~~~~~eVlVkv~a~gIcgsD~~~~~g~~~-~~~p~i~GhE~~G~V~~vG~~V   80 (393)
T TIGR02819         3 NRGVVYL-GPGKVEVQDIDYPKLELPDGRKCEHGVILKVVTTNICGSDQHMVRGRTT-APTGLVLGHEITGEVIEKGRDV   80 (393)
T ss_pred             ceEEEEe-cCCceeEEeccCCcccCCCccCCCCeEEEEEEEeeecHHHHHHHCCCCC-CCCCccccceeEEEEEEEcCcc
Confidence            5666665 4667999999999874       68999999999999999999988654 3568999999999999999999


Q ss_pred             CCCCCCCEEEEccccCCCCCCcccccCccccccccccc----CccccCCCCCCCCccceEEEeeCc--ceEECCCCCCc-
Q 018382           83 SNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWS----YNDVYTDGKPTQGGFAESMVVDQK--FVVKIPDGMAL-  155 (357)
Q Consensus        83 ~~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~G~~~~~~~v~~~--~~~~lP~~l~~-  155 (357)
                      ++|++||||++.+. ..||.|..|+.|.++.|+.....    +.+....+ ..+|+|+||++++..  .++++|++++. 
T Consensus        81 ~~~~vGdrV~~~~~-~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~-~~~G~~aey~~v~~~~~~l~~vP~~~~~~  158 (393)
T TIGR02819        81 EFIKIGDIVSVPFN-IACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDMG-GWVGGQSEYVMVPYADFNLLKFPDRDQAL  158 (393)
T ss_pred             ccccCCCEEEEecc-cCCCCChHHHCcCcccCcCCCCCCccceecccccC-CCCCceEEEEEechhhCceEECCCccccc
Confidence            99999999977655 45999999999999999964311    01110011 146999999999964  79999998754 


Q ss_pred             ---cccccccchhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCeEEE-EeCCcHHHHHHHHhcCCcEEEc
Q 018382          156 ---EQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTV-ISSSDKKRVEAMEHLGADQYLV  231 (357)
Q Consensus       156 ---~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~-~~~~~~~~~~~~~~~g~~~vv~  231 (357)
                         ++++++.+.+.++|+++.. ..++++++|||.|+|++|++++|+|+..|+++++ +++++++.+.+++ +|++.+.+
T Consensus       159 ~~~~~~a~l~~~~~ta~~a~~~-~~~~~g~~VlV~G~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~~a~~-~Ga~~v~~  236 (393)
T TIGR02819       159 EKIRDLTMLSDIFPTGYHGAVT-AGVGPGSTVYIAGAGPVGLAAAASAQLLGAAVVIVGDLNPARLAQARS-FGCETVDL  236 (393)
T ss_pred             ccccceeeeccHHHHHHHHHHh-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHH-cCCeEEec
Confidence               4567888889999999876 4558999999988899999999999999997554 4566778888877 99975433


Q ss_pred             CCCh---hHHHHhhC--CccEEEEcCCCCC--------------ChHHHHhccccCCeEEEEccCC-CCc----------
Q 018382          232 SSDA---TRMQEAAD--SLDYIIDTVPANH--------------PLEPYLSLLKLDGKLILTGVIN-TPM----------  281 (357)
Q Consensus       232 ~~~~---~~~~~~~~--~~d~v~d~~g~~~--------------~~~~~~~~l~~~G~~v~~g~~~-~~~----------  281 (357)
                      ..+.   +.+.++..  ++|++||++|...              .++.++++++++|+++.+|... +..          
T Consensus       237 ~~~~~~~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~G~~~~~~~~~~~~~~~~~  316 (393)
T TIGR02819       237 SKDATLPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVGGAIGIPGLYVTEDPGAVDAAAKTG  316 (393)
T ss_pred             CCcccHHHHHHHHcCCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCCCEEEEeeecCCccccccccccccc
Confidence            3322   23344443  7999999999852              6889999999999999999853 111          


Q ss_pred             --ccchHHHhhccceEEEEeecCHHHHHHHHHHHHhcCCCc--cE--EEeecccHHHHHHHHHcCCccEEEEEecC
Q 018382          282 --QFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTS--MI--EVIKMDYVNKAFERLEKNDVRYRFVVDVA  351 (357)
Q Consensus       282 --~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~--~i--~~~~~~~~~~a~~~~~~~~~~Gkvvi~~~  351 (357)
                        ++.....+.++.++.+......+.+.++++++.+++++.  .+  ++|+|+|+++||+.+.+++. +|+++++.
T Consensus       317 ~~~i~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~~l~~~~~a~~~~~~~~~-~Kvvi~~~  391 (393)
T TIGR02819       317 SLSIRFGLGWAKSHSFHTGQTPVMKYNRNLMQAILHDRVQIAKAVNVTVISLDDAPEGYAEFDAGAA-KKFVIDPH  391 (393)
T ss_pred             ccccchHHhhccCceEEeccCChhhhHHHHHHHHHcCCCCHHHceecceecHHHHHHHHHHHhhCCc-eEEEEeCC
Confidence              122334455666777644332233478999999999875  34  68999999999999988754 89999874

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.

>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-46  Score=348.29  Aligned_cols=328  Identities=23%  Similarity=0.354  Sum_probs=267.9

Q ss_pred             eeeehccCCCCCcceeeeecCCC-CCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCCC
Q 018382           10 TIGWAAKDPSGILSPYTYTLRNT-GAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVG   88 (357)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~p~~-~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~G   88 (357)
                      |+++++.+ ++.+++.++|.|+| .++||+||+.++++|++|++.+.+... ..+|.++|||++|+|+++|+++++|++|
T Consensus         1 Mka~~~~~-~~~~~~~~~~~P~~~~~~evlV~v~~~gi~~~D~~~~~~~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~vG   78 (347)
T PRK10309          1 MKSVVNDT-DGIVRVAESPIPEIKHQDDVLVKVASSGLCGSDIPRIFKNGA-HYYPITLGHEFSGYVEAVGSGVDDLHPG   78 (347)
T ss_pred             CceEEEeC-CCceEEEECCCCCCCCCCEEEEEEEEEEEchhcHHHHhCCCC-CCCCcccccceEEEEEEeCCCCCCCCCC
Confidence            35666553 55788999999998 699999999999999999975432211 2357899999999999999999999999


Q ss_pred             CEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhhh
Q 018382           89 DKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTV  168 (357)
Q Consensus        89 d~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta  168 (357)
                      |+|++.+.. .|+.|..|..|.++.|....+.       |....|+|+||+.++++.++++|+++++++++.+. .+.++
T Consensus        79 d~V~~~~~~-~c~~c~~c~~g~~~~c~~~~~~-------g~~~~G~~aey~~v~~~~~~~lP~~~s~~~aa~~~-~~~~~  149 (347)
T PRK10309         79 DAVACVPLL-PCFTCPECLRGFYSLCAKYDFI-------GSRRDGGNAEYIVVKRKNLFALPTDMPIEDGAFIE-PITVG  149 (347)
T ss_pred             CEEEECCCc-CCCCCcchhCcCcccCCCccee-------ccCCCCccceeEEeehHHeEECcCCCCHHHhhhhh-HHHHH
Confidence            999877665 5999999999999999864332       33468999999999999999999999999998763 34557


Q ss_pred             hhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCe-EEEEeCCcHHHHHHHHhcCCcEEEcCCChh--HHHHhh--C
Q 018382          169 FSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHH-VTVISSSDKKRVEAMEHLGADQYLVSSDAT--RMQEAA--D  243 (357)
Q Consensus       169 ~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~-V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~--~~~~~~--~  243 (357)
                      |.++.. ..++++++|||+|+|++|++++|+|+..|++ |+++++++++.+.+++ +|++++++.++..  .+.+..  .
T Consensus       150 ~~~~~~-~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~-~Ga~~~i~~~~~~~~~~~~~~~~~  227 (347)
T PRK10309        150 LHAFHL-AQGCEGKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDINSEKLALAKS-LGAMQTFNSREMSAPQIQSVLREL  227 (347)
T ss_pred             HHHHHh-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHH-cCCceEecCcccCHHHHHHHhcCC
Confidence            777644 4458999999999999999999999999996 7888888889888766 9999999876532  223332  2


Q ss_pred             Ccc-EEEEcCCCCCChHHHHhccccCCeEEEEccCCCCcccc---hHHHhhccceEEEEeecC-----HHHHHHHHHHHH
Q 018382          244 SLD-YIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFL---TPMVMLGRKAITGSFIGS-----MKETKEMLEFCR  314 (357)
Q Consensus       244 ~~d-~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~---~~~~~~~~~~i~g~~~~~-----~~~~~~~~~~~~  314 (357)
                      ++| ++|||+|....+..++++++++|+++.+|.......++   ...++.+++++.|++.+.     .++++++++++.
T Consensus       228 ~~d~~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~  307 (347)
T PRK10309        228 RFDQLILETAGVPQTVELAIEIAGPRAQLALVGTLHHDLHLTSATFGKILRKELTVIGSWMNYSSPWPGQEWETASRLLT  307 (347)
T ss_pred             CCCeEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCcccChhhhhHHhhcCcEEEEEeccccCCcchhHHHHHHHHHH
Confidence            688 99999998657889999999999999999765433322   235677899999987642     367899999999


Q ss_pred             hcCCC--ccE-EEeecccHHHHHHHHHcCCccEEEEEec
Q 018382          315 EKGVT--SMI-EVIKMDYVNKAFERLEKNDVRYRFVVDV  350 (357)
Q Consensus       315 ~~~l~--~~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~  350 (357)
                      ++.++  +.+ ++|+|+|+++|++.+.+++..||+++++
T Consensus       308 ~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  346 (347)
T PRK10309        308 ERKLSLEPLIAHRGSFESFAQAVRDLAGNPMPGKVLLQI  346 (347)
T ss_pred             cCCCCchhheEEEeeHHHHHHHHHHHhcCCcceEEEEeC
Confidence            99985  457 8999999999999999998889999976

>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=7.3e-46  Score=342.90  Aligned_cols=336  Identities=52%  Similarity=0.949  Sum_probs=296.6

Q ss_pred             eehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCCCCEE
Q 018382           12 GWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKV   91 (357)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V   91 (357)
                      +|........+++.++++|+|.++||+||+.++++|++|++.+.|......+|.++|||++|+|+++|+++++|++||+|
T Consensus         2 ~~~~~~~~~~~~~~~~~~p~~~~~evlirv~a~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~~Gd~V   81 (337)
T cd05283           2 GYAARDASGKLEPFTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWGPTKYPLVPGHEIVGIVVAVGSKVTKFKVGDRV   81 (337)
T ss_pred             ceEEecCCCCceEEeccCCCCCCCeEEEEEEEecccchHHHHhcCCcCCCCCCcccCcceeeEEEEECCCCcccCCCCEE
Confidence            45555556789999999999999999999999999999999998876555668899999999999999999999999999


Q ss_pred             EEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhhhhhh
Q 018382           92 GVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSP  171 (357)
Q Consensus        92 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~  171 (357)
                      ++.+..+.|++|..|..+..++|+...+.+.+.+.++....|+|++|+.++.+.++++|+++++++++.+++.+.+||.+
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~  161 (337)
T cd05283          82 GVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKYPDGTITQGGYADHIVVDERFVFKIPEGLDSAAAAPLLCAGITVYSP  161 (337)
T ss_pred             EEecCCCCCCCCccccCCchhcCcchhhcccccccCCCcCCCcceeEEEechhheEECCCCCCHHHhhhhhhHHHHHHHH
Confidence            76777889999999999999999988766666555565668999999999999999999999999999999999999999


Q ss_pred             hhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEc
Q 018382          172 LSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDT  251 (357)
Q Consensus       172 l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~  251 (357)
                      +.... ++++++|+|.|+|.+|++++++++..|++|+++++++++.+.+.+ +|++++++.+..+..+...+++|++|||
T Consensus       162 ~~~~~-~~~g~~vlV~g~g~vG~~~~~~a~~~G~~v~~~~~~~~~~~~~~~-~g~~~vi~~~~~~~~~~~~~~~d~v~~~  239 (337)
T cd05283         162 LKRNG-VGPGKRVGVVGIGGLGHLAVKFAKALGAEVTAFSRSPSKKEDALK-LGADEFIATKDPEAMKKAAGSLDLIIDT  239 (337)
T ss_pred             HHhcC-CCCCCEEEEECCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHH-cCCcEEecCcchhhhhhccCCceEEEEC
Confidence            98776 599999999888999999999999999999999999888888866 9999998877655444455689999999


Q ss_pred             CCCCCChHHHHhccccCCeEEEEccCCCCcccchHHHhhccceEEEEeecCHHHHHHHHHHHHhcCCCccEEEeecccHH
Q 018382          252 VPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEVIKMDYVN  331 (357)
Q Consensus       252 ~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~  331 (357)
                      ++.......++++++++|+++.+|.......++...++.++.++.++.....++++.+++++.++.+++.+++|++++++
T Consensus       240 ~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  319 (337)
T cd05283         240 VSASHDLDPYLSLLKPGGTLVLVGAPEEPLPVPPFPLIFGRKSVAGSLIGGRKETQEMLDFAAEHGIKPWVEVIPMDGIN  319 (337)
T ss_pred             CCCcchHHHHHHHhcCCCEEEEEeccCCCCccCHHHHhcCceEEEEecccCHHHHHHHHHHHHhCCCccceEEEEHHHHH
Confidence            99874588999999999999999876554455666667899999999988889999999999999998777899999999


Q ss_pred             HHHHHHHcCCccEEEEEe
Q 018382          332 KAFERLEKNDVRYRFVVD  349 (357)
Q Consensus       332 ~a~~~~~~~~~~Gkvvi~  349 (357)
                      +||+.+++++..||+|++
T Consensus       320 ~a~~~~~~~~~~~k~v~~  337 (337)
T cd05283         320 EALERLEKGDVRYRFVLD  337 (337)
T ss_pred             HHHHHHHcCCCcceEeeC
Confidence            999999999999999874

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic

>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase

Probab=100.00  E-value=1.6e-46  Score=347.29  Aligned_cols=319  Identities=18%  Similarity=0.191  Sum_probs=252.4

Q ss_pred             heeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCC----CCCCCccCccccEEEEEeCCCCCC
Q 018382            9 ATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGM----SNYPMVPGHEVVGEVKEVGSEVSN   84 (357)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~----~~~p~~lG~e~~G~V~~vG~~v~~   84 (357)
                      +.+++++. +++.+++++++.|+ +++||||||+++|+|++|+++++|..+.    ..+|.++|||++|+|+++|.+  +
T Consensus         2 ~~~~~~~~-~~~~~~~~~~~~P~-~~~eVlVkv~a~gIc~sD~~~~~G~~~~~~~~~~~P~i~GhE~~G~V~~~g~~--~   77 (341)
T cd08237           2 INQVYRLV-RPKFFEVTYEEENL-REDWVIVRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHEGIGVVVSDPTG--T   77 (341)
T ss_pred             cccceEEe-ccceEEEeecCCCC-CCCeEEEEEEEEEEcCccHHHHcCCCCcccccCCCCeeccceeEEEEEeeCCC--c
Confidence            45666665 57789999999995 9999999999999999999999987532    357999999999999998875  7


Q ss_pred             CCCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccch
Q 018382           85 FKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCA  164 (357)
Q Consensus        85 ~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~  164 (357)
                      |++||||++.+... |+ |+.|  +..+.|+...+.       |...+|+|+||++++++.++++|+++++++|| +...
T Consensus        78 ~~vGdrV~~~~~~~-~~-~~~~--~~~~~c~~~~~~-------g~~~~G~~aey~~v~~~~~~~vP~~l~~~~aa-~~~~  145 (341)
T cd08237          78 YKVGTKVVMVPNTP-VE-KDEI--IPENYLPSSRFR-------SSGYDGFMQDYVFLPPDRLVKLPDNVDPEVAA-FTEL  145 (341)
T ss_pred             cCCCCEEEECCCCC-ch-hccc--chhccCCCccee-------EecCCCceEEEEEEchHHeEECCCCCChHHhh-hhch
Confidence            99999998776554 76 4455  456788764432       22357999999999999999999999999877 4457


Q ss_pred             hhhhhhhhhccC--CCCCCCeEEEEecChHHHHHHHHHHH-cC-CeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHH
Q 018382          165 GVTVFSPLSHFG--LKQSGLRGGILGLGGVGHMGVLIAKA-MG-HHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQE  240 (357)
Q Consensus       165 ~~ta~~~l~~~~--~~~~~~~VlI~G~g~~G~~ai~la~~-~g-~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~  240 (357)
                      +.++|+++....  .+++|++|||+|+|++|++++|+++. .| .+|++++++++|++.+++ .++++.++    +..++
T Consensus       146 ~~~a~~a~~~~~~~~~~~g~~VlV~G~G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~~-~~~~~~~~----~~~~~  220 (341)
T cd08237         146 VSVGVHAISRFEQIAHKDRNVIGVWGDGNLGYITALLLKQIYPESKLVVFGKHQEKLDLFSF-ADETYLID----DIPED  220 (341)
T ss_pred             HHHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHhh-cCceeehh----hhhhc
Confidence            788888885432  34789999999999999999999986 55 489999999888888876 77654332    11111


Q ss_pred             hhCCccEEEEcCCC---CCChHHHHhccccCCeEEEEccCCCCcccchHHHhhccceEEEEeecCHHHHHHHHHHHHhc-
Q 018382          241 AADSLDYIIDTVPA---NHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREK-  316 (357)
Q Consensus       241 ~~~~~d~v~d~~g~---~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~-  316 (357)
                        .++|+|||++|+   ...+..++++++++|+++.+|.......++...++.+++++.|+..++.++++++++++.++ 
T Consensus       221 --~g~d~viD~~G~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~~~~~~  298 (341)
T cd08237         221 --LAVDHAFECVGGRGSQSAINQIIDYIRPQGTIGLMGVSEYPVPINTRMVLEKGLTLVGSSRSTREDFERAVELLSRNP  298 (341)
T ss_pred             --cCCcEEEECCCCCccHHHHHHHHHhCcCCcEEEEEeecCCCcccCHHHHhhCceEEEEecccCHHHHHHHHHHHHhCC
Confidence              269999999995   33578899999999999999976544556666778899999999887778899999999998 


Q ss_pred             ----CCCccE-EEeeccc---HHHHHHHHHcCCccEEEEEecC
Q 018382          317 ----GVTSMI-EVIKMDY---VNKAFERLEKNDVRYRFVVDVA  351 (357)
Q Consensus       317 ----~l~~~i-~~~~~~~---~~~a~~~~~~~~~~Gkvvi~~~  351 (357)
                          .+++.| ++|++++   +.+||+.+.++ ..||+||+++
T Consensus       299 ~~~~~l~~~i~~~~~l~~l~~~~~a~~~~~~~-~~gKvvi~~~  340 (341)
T cd08237         299 EVAEYLRKLVGGVFPVRSINDIHRAFESDLTN-SWGKTVMEWE  340 (341)
T ss_pred             cccCChHHHhccccccccHHHHHHHHHHHhhc-CcceEEEEee
Confidence                466677 8999864   55555555444 6799999764

NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=100.00  E-value=2.6e-45  Score=342.42  Aligned_cols=337  Identities=23%  Similarity=0.353  Sum_probs=280.1

Q ss_pred             eeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCC------
Q 018382           11 IGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSN------   84 (357)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~------   84 (357)
                      +++++....+.+++++++.|.|+++||+||+.++++|++|++...|..+...+|.++|||++|+|+++|+++++      
T Consensus         2 ka~~~~~~~~~l~~~~~~~p~~~~~evlV~v~a~~l~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~~~~   81 (361)
T cd08231           2 RAAVLTGPGKPLEIREVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRRPRVPLPIILGHEGVGRVVALGGGVTTDVAGEP   81 (361)
T ss_pred             eEEEEcCCCCCCEEEeccCCCCCCCeEEEEEEEEeecCccHHHhcCCCCCCCCCcccccCCceEEEEeCCCccccccCCc
Confidence            45555544458999999999999999999999999999999999887653467889999999999999999986      


Q ss_pred             CCCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCc-ceEECCCCCCccccccccc
Q 018382           85 FKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQK-FVVKIPDGMALEQAAPLLC  163 (357)
Q Consensus        85 ~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~-~~~~lP~~l~~~~aa~~~~  163 (357)
                      |++||+|++. ...+|+.|..|+.+.++.|++..+.+.+....+....|+|++|+.++++ .++++|++++.++++++++
T Consensus        82 ~~~Gd~V~~~-~~~~~~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~lP~~~~~~~aa~~~~  160 (361)
T cd08231          82 LKVGDRVTWS-VGAPCGRCYRCLVGDPTKCENRKKYGHEASCDDPHLSGGYAEHIYLPPGTAIVRVPDNVPDEVAAPANC  160 (361)
T ss_pred             cCCCCEEEEc-ccCCCCCChhHhCcCccccccchhccccccccCCCCCcccceEEEecCCCceEECCCCCCHHHHHHhcC
Confidence            9999999765 4447999999999999999987644322111112246999999999986 7999999999999999999


Q ss_pred             hhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCcEEEcCCChh------
Q 018382          164 AGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGADQYLVSSDAT------  236 (357)
Q Consensus       164 ~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~------  236 (357)
                      +++|||+++.....++++++|||+|+|++|++++|+|+..|+ +|+++++++++...+++ +|++++++.++..      
T Consensus       161 ~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~-~g~~~vi~~~~~~~~~~~~  239 (361)
T cd08231         161 ALATVLAALDRAGPVGAGDTVVVQGAGPLGLYAVAAAKLAGARRVIVIDGSPERLELARE-FGADATIDIDELPDPQRRA  239 (361)
T ss_pred             HHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH-cCCCeEEcCcccccHHHHH
Confidence            999999999988886799999999999999999999999999 99999999888888876 9999988776432      


Q ss_pred             HHHHhhC--CccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCC--cccchHHHhhccceEEEEeecCHHHHHHHHHH
Q 018382          237 RMQEAAD--SLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTP--MQFLTPMVMLGRKAITGSFIGSMKETKEMLEF  312 (357)
Q Consensus       237 ~~~~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~  312 (357)
                      .+.+...  ++|++||++|....+..++++++++|+++.+|.....  ..+....++.++.++.++...+.+++++++++
T Consensus       240 ~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  319 (361)
T cd08231         240 IVRDITGGRGADVVIEASGHPAAVPEGLELLRRGGTYVLVGSVAPAGTVPLDPERIVRKNLTIIGVHNYDPSHLYRAVRF  319 (361)
T ss_pred             HHHHHhCCCCCcEEEECCCChHHHHHHHHHhccCCEEEEEcCCCCCCccccCHHHHhhcccEEEEcccCCchhHHHHHHH
Confidence            2333333  7999999998754688899999999999999876432  33444456788999999988777889999999


Q ss_pred             HHhc--CC--CccE-EEeecccHHHHHHHHHcCCccEEEEEec
Q 018382          313 CREK--GV--TSMI-EVIKMDYVNKAFERLEKNDVRYRFVVDV  350 (357)
Q Consensus       313 ~~~~--~l--~~~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~  350 (357)
                      +.++  .+  .+.+ ++|+++++++||+.+++++. +|++|++
T Consensus       320 ~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~~-~k~vi~~  361 (361)
T cd08231         320 LERTQDRFPFAELVTHRYPLEDINEALELAESGTA-LKVVIDP  361 (361)
T ss_pred             HHhccCcCCchhheeeeeeHHHHHHHHHHHHcCCc-eEEEeCC
Confidence            9887  43  3456 89999999999999988774 8999863

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=100.00  E-value=4.6e-45  Score=339.45  Aligned_cols=327  Identities=27%  Similarity=0.404  Sum_probs=275.6

Q ss_pred             eeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCC---C--------CCCCCCccCccccEEEEEe
Q 018382           10 TIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDL---G--------MSNYPMVPGHEVVGEVKEV   78 (357)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~---~--------~~~~p~~lG~e~~G~V~~v   78 (357)
                      |++|++. +++.+++++++.|+|.++||+||+.++++|++|++.+.+..   +        ...+|.++|||++|+|+++
T Consensus         1 mka~~~~-~~~~l~~~~~~~p~~~~~evlV~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~v   79 (351)
T cd08233           1 MKAARYH-GRKDIRVEEVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFSGVVVEV   79 (351)
T ss_pred             CceEEEe-cCCceEEEeccCCCCCCCeEEEEEEEEEECccchHhhcCCCccccccccccccccCCCceecccceEEEEEe
Confidence            3566665 35679999999999999999999999999999998765421   1        1136789999999999999


Q ss_pred             CCCCCCCCCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCC-CCCCccceEEEeeCcceEECCCCCCccc
Q 018382           79 GSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGK-PTQGGFAESMVVDQKFVVKIPDGMALEQ  157 (357)
Q Consensus        79 G~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~G~~~~~~~v~~~~~~~lP~~l~~~~  157 (357)
                      |+++++|++||+|++. ....|+.|..|.++.++.|....+.       +. ..+|+|++|+.++.+.++++|+++++++
T Consensus        80 G~~v~~~~~Gd~V~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~g~~a~~~~~~~~~~~~lP~~~~~~~  151 (351)
T cd08233          80 GSGVTGFKVGDRVVVE-PTIKCGTCGACKRGLYNLCDSLGFI-------GLGGGGGGFAEYVVVPAYHVHKLPDNVPLEE  151 (351)
T ss_pred             CCCCCCCCCCCEEEEC-CCCCCCCChHHhCcCcccCCCCcee-------ccCCCCCceeeEEEechHHeEECcCCCCHHH
Confidence            9999999999999775 4447999999999999999865422       11 1379999999999999999999999999


Q ss_pred             cccccchhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCcEEEcCCChh
Q 018382          158 AAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGADQYLVSSDAT  236 (357)
Q Consensus       158 aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~  236 (357)
                      ++.+ ..+.+||.++ ....++++++|+|+|+|.+|++++|+|+..|+ +|+++++++++.+.+.+ +|++.++++++.+
T Consensus       152 aa~~-~~~~ta~~~l-~~~~~~~g~~vlI~g~g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~~-~ga~~~i~~~~~~  228 (351)
T cd08233         152 AALV-EPLAVAWHAV-RRSGFKPGDTALVLGAGPIGLLTILALKAAGASKIIVSEPSEARRELAEE-LGATIVLDPTEVD  228 (351)
T ss_pred             hhhc-cHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-hCCCEEECCCccC
Confidence            8866 6778999998 44556899999999999999999999999999 89999989888888876 9999999987755


Q ss_pred             HHHHh---hC--CccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCcccchHHHhhccceEEEEeecCHHHHHHHHH
Q 018382          237 RMQEA---AD--SLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLE  311 (357)
Q Consensus       237 ~~~~~---~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~  311 (357)
                      ..+++   ..  ++|++||++|....+..++++++++|+++.+|.......++...++.+++++.+...+..++++++++
T Consensus       229 ~~~~l~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~  308 (351)
T cd08233         229 VVAEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPRGTAVNVAIWEKPISFNPNDLVLKEKTLTGSICYTREDFEEVID  308 (351)
T ss_pred             HHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCCCEEEEEccCCCCCccCHHHHHhhCcEEEEEeccCcchHHHHHH
Confidence            44333   22  59999999987547889999999999999999876555667777788999999998777788999999


Q ss_pred             HHHhcCCCc--cE-EEeecccH-HHHHHHHHcCCcc-EEEEE
Q 018382          312 FCREKGVTS--MI-EVIKMDYV-NKAFERLEKNDVR-YRFVV  348 (357)
Q Consensus       312 ~~~~~~l~~--~i-~~~~~~~~-~~a~~~~~~~~~~-Gkvvi  348 (357)
                      +++++.+++  .+ ++|+++|+ ++|++.+.+++.. ||++|
T Consensus       309 ~~~~g~l~~~~~i~~~~~l~e~~~~a~~~~~~~~~~~~k~v~  350 (351)
T cd08233         309 LLASGKIDAEPLITSRIPLEDIVEKGFEELINDKEQHVKILV  350 (351)
T ss_pred             HHHcCCCChHHheEEEecHHHHHHHHHHHHHhCCCCceEEEe
Confidence            999999964  46 89999996 7999999998875 99987

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>cd05284 arabinose_DH_like D-arabinose dehydrogenase

Probab=100.00  E-value=2.7e-43  Score=326.21  Aligned_cols=330  Identities=29%  Similarity=0.436  Sum_probs=281.2

Q ss_pred             eeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCC---CCCCCCccCccccEEEEEeCCCCCCCC
Q 018382           10 TIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLG---MSNYPMVPGHEVVGEVKEVGSEVSNFK   86 (357)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~---~~~~p~~lG~e~~G~V~~vG~~v~~~~   86 (357)
                      |+++++...++++.+.+++.|++.++||+||+.++++|++|+....|.++   ...+|.++|+|++|+|+++|+++.+|+
T Consensus         1 ~ka~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~   80 (340)
T cd05284           1 MKAARLYEYGKPLRLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAGWVEEVGSGVDGLK   80 (340)
T ss_pred             CeeeEeccCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCcccccCCCCeecccceeEEEEEeCCCCCcCc
Confidence            35666654446788889999999999999999999999999999888664   345578899999999999999999999


Q ss_pred             CCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhh
Q 018382           87 VGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGV  166 (357)
Q Consensus        87 ~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~  166 (357)
                      +||+|++.+.. .|+.|..|..|..++|+...+.       |.+.+|+|++|+.++.++++++|++++++++++++..+.
T Consensus        81 ~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~v~~~~~~~~P~~ls~~~aa~l~~~~~  152 (340)
T cd05284          81 EGDPVVVHPPW-GCGTCRYCRRGEENYCENARFP-------GIGTDGGFAEYLLVPSRRLVKLPRGLDPVEAAPLADAGL  152 (340)
T ss_pred             CCCEEEEcCCC-CCCCChHHhCcCcccCCCCccc-------CccCCCcceeeEEecHHHeEECCCCCCHHHhhhhcchHH
Confidence            99999776554 6999999999999999977654       334689999999999999999999999999999999999


Q ss_pred             hhhhhhhcc-CCCCCCCeEEEEecChHHHHHHHHHHHcC-CeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHH---h
Q 018382          167 TVFSPLSHF-GLKQSGLRGGILGLGGVGHMGVLIAKAMG-HHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQE---A  241 (357)
Q Consensus       167 ta~~~l~~~-~~~~~~~~VlI~G~g~~G~~ai~la~~~g-~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~---~  241 (357)
                      |||.++... ..+.++++|||+|+|.+|++++|+|+..| .+|+++++++++.+.+++ +|++++++++.. ...+   .
T Consensus       153 ta~~~l~~~~~~~~~~~~vlI~g~~~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~-~~~~i~~~  230 (340)
T cd05284         153 TAYHAVKKALPYLDPGSTVVVIGVGGLGHIAVQILRALTPATVIAVDRSEEALKLAER-LGADHVLNASDD-VVEEVREL  230 (340)
T ss_pred             HHHHHHHHhcccCCCCCEEEEEcCcHHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHH-hCCcEEEcCCcc-HHHHHHHH
Confidence            999999876 45688999999999889999999999999 799999999888888866 999999987764 3333   3


Q ss_pred             hC--CccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCcccchHHHhhccceEEEEeecCHHHHHHHHHHHHhcCCC
Q 018382          242 AD--SLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVT  319 (357)
Q Consensus       242 ~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~  319 (357)
                      ..  ++|+++|++|+......++++++++|+++.+|.... ..++....+.++.++.++.....+.++.+++++.++.++
T Consensus       231 ~~~~~~dvvld~~g~~~~~~~~~~~l~~~g~~i~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~  309 (340)
T cd05284         231 TGGRGADAVIDFVGSDETLALAAKLLAKGGRYVIVGYGGH-GRLPTSDLVPTEISVIGSLWGTRAELVEVVALAESGKVK  309 (340)
T ss_pred             hCCCCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEEcCCCC-CccCHHHhhhcceEEEEEecccHHHHHHHHHHHHhCCCC
Confidence            32  699999999975478899999999999999986543 333344445788888888776678899999999999998


Q ss_pred             ccEEEeecccHHHHHHHHHcCCccEEEEEec
Q 018382          320 SMIEVIKMDYVNKAFERLEKNDVRYRFVVDV  350 (357)
Q Consensus       320 ~~i~~~~~~~~~~a~~~~~~~~~~Gkvvi~~  350 (357)
                      +.++.|+++++++|++.+++++..||+++.+
T Consensus       310 ~~~~~~~~~~~~~a~~~~~~~~~~gkvv~~~  340 (340)
T cd05284         310 VEITKFPLEDANEALDRLREGRVTGRAVLVP  340 (340)
T ss_pred             cceEEEeHHHHHHHHHHHHcCCccceEEecC
Confidence            7668899999999999999999999999763

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d

>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase

Probab=100.00  E-value=5.7e-44  Score=325.71  Aligned_cols=300  Identities=19%  Similarity=0.237  Sum_probs=241.7

Q ss_pred             heeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccc-cchHHHHhcCCCC---CCCCCccCccccEEEEEeCCCCCC
Q 018382            9 ATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGIC-HTDIHQIKNDLGM---SNYPMVPGHEVVGEVKEVGSEVSN   84 (357)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~-~~D~~~~~g~~~~---~~~p~~lG~e~~G~V~~vG~~v~~   84 (357)
                      +++++++. +++.+++++++.|+|+++|||||+.++++| ++|++++.|..+.   ..+|.++|||++|+|+++|+++ +
T Consensus         1 ~~ka~~~~-~~~~l~~~e~~~p~~~~~evlVkv~~~gi~~~~D~~~~~G~~~~~~~~~~P~i~GhE~~G~V~~vG~~v-~   78 (308)
T TIGR01202         1 KTQAIVLS-GPNQIELREVTLTPPSPGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYESVGRVVEAGPDT-G   78 (308)
T ss_pred             CceEEEEe-CCCeEEEEEecCCCCCCCeEEEEEEEEeeccCchhHHhcCCCCCCCCCCCCccCcceeEEEEEEecCCC-C
Confidence            45677765 567899999999999999999999999996 6999999887653   3579999999999999999998 6


Q ss_pred             CCCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccch
Q 018382           85 FKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCA  164 (357)
Q Consensus        85 ~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~  164 (357)
                      |++||||++.     |..|..|..                     ...|+|+||++++++.++++|++++++. +++. .
T Consensus        79 ~~vGdrV~~~-----~~~c~~~~~---------------------~~~G~~aey~~v~~~~~~~ip~~~~~~~-a~~~-~  130 (308)
T TIGR01202        79 FRPGDRVFVP-----GSNCYEDVR---------------------GLFGGASKRLVTPASRVCRLDPALGPQG-ALLA-L  130 (308)
T ss_pred             CCCCCEEEEe-----Ccccccccc---------------------ccCCcccceEEcCHHHceeCCCCCCHHH-Hhhh-H
Confidence            9999999752     333433221                     1369999999999999999999999864 5444 4


Q ss_pred             hhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCe-EEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhC
Q 018382          165 GVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHH-VTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAAD  243 (357)
Q Consensus       165 ~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~-V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~  243 (357)
                      ..|||+++....  .++++|+|+|+|++|++++|+|+..|++ |+++..++++++.+.+    .+++|..+.     ...
T Consensus       131 ~~~a~~~~~~~~--~~~~~vlV~G~G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~~----~~~i~~~~~-----~~~  199 (308)
T TIGR01202       131 AATARHAVAGAE--VKVLPDLIVGHGTLGRLLARLTKAAGGSPPAVWETNPRRRDGATG----YEVLDPEKD-----PRR  199 (308)
T ss_pred             HHHHHHHHHhcc--cCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhhh----ccccChhhc-----cCC
Confidence            689999987642  4688999999999999999999999997 4455555555544433    344544321     234


Q ss_pred             CccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCcccchHHHhhccceEEEEeecCHHHHHHHHHHHHhcCCCc--c
Q 018382          244 SLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTS--M  321 (357)
Q Consensus       244 ~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~--~  321 (357)
                      ++|+||||+|....++.++++++++|+++.+|.......++...++.+++++.++..+..++++++++++.++.+++  .
T Consensus       200 g~Dvvid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~g~i~~~~~  279 (308)
T TIGR01202       200 DYRAIYDASGDPSLIDTLVRRLAKGGEIVLAGFYTEPVNFDFVPAFMKEARLRIAAEWQPGDLHAVRELIESGALSLDGL  279 (308)
T ss_pred             CCCEEEECCCCHHHHHHHHHhhhcCcEEEEEeecCCCcccccchhhhcceEEEEecccchhHHHHHHHHHHcCCCChhhc
Confidence            79999999998756889999999999999999865555566666778889999988887888999999999999986  4


Q ss_pred             E-EEeecccHHHHHHHHHcCCccEEEEEe
Q 018382          322 I-EVIKMDYVNKAFERLEKNDVRYRFVVD  349 (357)
Q Consensus       322 i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~  349 (357)
                      + ++|+|+|+++||+.+.++...+|++++
T Consensus       280 it~~~~l~~~~~A~~~~~~~~~~~Kv~~~  308 (308)
T TIGR01202       280 ITHQRPASDAAEAYMTAFSDPDCLKMILD  308 (308)
T ss_pred             cceeecHHHHHHHHHHHhcCcCceEEEeC
Confidence            6 899999999999988777777999874

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=100.00  E-value=3.7e-43  Score=332.50  Aligned_cols=323  Identities=17%  Similarity=0.243  Sum_probs=256.5

Q ss_pred             hheeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHH-hcCC-CC-----CCCCCccCccccEEEEEeCC
Q 018382            8 RATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQI-KNDL-GM-----SNYPMVPGHEVVGEVKEVGS   80 (357)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~-~g~~-~~-----~~~p~~lG~e~~G~V~~vG~   80 (357)
                      |+|+++...+ ++.++++++|.|+|+++||+||+.++++|++|++.+ .|.. +.     ..+|.++|||++|+|+++|+
T Consensus         1 m~~~a~~~~~-~~~l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~g~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~   79 (410)
T cd08238           1 MKTKAWRMYG-KGDLRLEKFELPEIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHEFAGTILKVGK   79 (410)
T ss_pred             CCcEEEEEEc-CCceEEEecCCCCCCCCeEEEEEEEeccCCCCHHHHhcCCccccCcccccCCCceeccccEEEEEEeCC
Confidence            4678888774 557999999999999999999999999999999976 4532 11     24688999999999999999


Q ss_pred             CCC-CCCCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCc----ceEECCCCCCc
Q 018382           81 EVS-NFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQK----FVVKIPDGMAL  155 (357)
Q Consensus        81 ~v~-~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~----~~~~lP~~l~~  155 (357)
                      +++ +|++||||++.+.. .|+.|..|..        .          |...+|+|+||++++++    .++++|+++++
T Consensus        80 ~v~~~~~vGdrV~~~~~~-~c~~~~~c~~--------~----------g~~~~G~~aey~~v~~~~~~~~~~~lP~~l~~  140 (410)
T cd08238          80 KWQGKYKPGQRFVIQPAL-ILPDGPSCPG--------Y----------SYTYPGGLATYHIIPNEVMEQDCLLIYEGDGY  140 (410)
T ss_pred             CccCCCCCCCEEEEcCCc-CCCCCCCCCC--------c----------cccCCCcceEEEEecHHhccCCeEECCCCCCH
Confidence            998 69999999766443 4888876621        0          22357999999999987    68999999999


Q ss_pred             cccccc-c--chhhhhhhhh--------hccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCC---eEEEEeCCcHHHHHH
Q 018382          156 EQAAPL-L--CAGVTVFSPL--------SHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGH---HVTVISSSDKKRVEA  220 (357)
Q Consensus       156 ~~aa~~-~--~~~~ta~~~l--------~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~---~V~~~~~~~~~~~~~  220 (357)
                      ++++.+ +  +. .+++.++        .....+++|++|+|+|+ |++|++++|+|+..|+   +|+++++++++.+.+
T Consensus       141 ~~aal~epl~~~-~~~~~a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a  219 (410)
T cd08238         141 AEASLVEPLSCV-IGAYTANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARA  219 (410)
T ss_pred             HHHhhcchHHHH-HHHhhhcccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHH
Confidence            998854 3  22 2233332        23455689999999985 9999999999999754   799999999999888


Q ss_pred             HHhc--------CCc-EEEcCCC-hhH---HHHhhC--CccEEEEcCCCCCChHHHHhccccCCeEEEEccC-CC--Ccc
Q 018382          221 MEHL--------GAD-QYLVSSD-ATR---MQEAAD--SLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVI-NT--PMQ  282 (357)
Q Consensus       221 ~~~~--------g~~-~vv~~~~-~~~---~~~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~-~~--~~~  282 (357)
                      ++ +        |++ ++++.++ .+.   +.+++.  ++|++||++|....+..++++++++|+++.++.. ..  ...
T Consensus       220 ~~-~~~~~~~~~Ga~~~~i~~~~~~~~~~~v~~~t~g~g~D~vid~~g~~~~~~~a~~~l~~~G~~v~~~g~~~~~~~~~  298 (410)
T cd08238         220 QR-LFPPEAASRGIELLYVNPATIDDLHATLMELTGGQGFDDVFVFVPVPELVEEADTLLAPDGCLNFFAGPVDKNFSAP  298 (410)
T ss_pred             HH-hccccccccCceEEEECCCccccHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhccCCeEEEEEccCCCCcccc
Confidence            88 5        666 5677643 222   333333  7999999998765788999999999988776543 22  234


Q ss_pred             cchHHHhhccceEEEEeecCHHHHHHHHHHHHhcCCCc--cE-EEeecccHHHHHHHHHcCCccEEEEEecCCC
Q 018382          283 FLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTS--MI-EVIKMDYVNKAFERLEKNDVRYRFVVDVAGS  353 (357)
Q Consensus       283 ~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~--~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~~~~  353 (357)
                      ++...++.+++++.|+..+..++++++++++.+|++++  .+ ++|+|+++++||+.+. ++..||+++.++..
T Consensus       299 ~~~~~~~~~~~~i~g~~~~~~~~~~~~~~li~~g~i~~~~~it~~~~l~~~~~A~~~~~-~~~~gKvvl~~~~~  371 (410)
T cd08238         299 LNFYNVHYNNTHYVGTSGGNTDDMKEAIDLMAAGKLNPARMVTHIGGLNAAAETTLNLP-GIPGGKKLIYTQKP  371 (410)
T ss_pred             ccHHHhhhcCcEEEEeCCCCHHHHHHHHHHHHcCCCchhhcEEEEecHHHHHHHHHHhh-ccCCceEEEECCCC
Confidence            66667888999999999888889999999999999987  56 8999999999999999 77789999988543

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>PRK10083 putative oxidoreductase; Provisional

Probab=100.00  E-value=8.4e-43  Score=322.79  Aligned_cols=330  Identities=22%  Similarity=0.315  Sum_probs=269.7

Q ss_pred             eeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCCCC
Q 018382           10 TIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGD   89 (357)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd   89 (357)
                      |++++.. +++.+.+.+++.|+|.++|++||+.++++|++|++.+.|..+...+|.++|||++|+|+++|++++.|++||
T Consensus         1 m~a~~~~-~~~~~~~~~~~~p~~~~~~vlV~v~~~gi~~~d~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd   79 (339)
T PRK10083          1 MKSIVIE-KPNSLAIEERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHNPFAKYPRVIGHEFFGVIDAVGEGVDAARIGE   79 (339)
T ss_pred             CeEEEEe-cCCeeEEEeccCCCCCCCeEEEEEEEEEEcccchHHHcCCCCcCCCCcccccceEEEEEEECCCCccCCCCC
Confidence            3566655 466888999999999999999999999999999999988766546788999999999999999999999999


Q ss_pred             EEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhhhh
Q 018382           90 KVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVF  169 (357)
Q Consensus        90 ~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~  169 (357)
                      +|++.+..+ |+.|..|..+.++.|.+..+.       +...+|+|+||+.++.+.++++|+++++++++ +...+.++|
T Consensus        80 ~V~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~a~-~~~~~~~a~  150 (339)
T PRK10083         80 RVAVDPVIS-CGHCYPCSIGKPNVCTSLVVL-------GVHRDGGFSEYAVVPAKNAHRIPDAIADQYAV-MVEPFTIAA  150 (339)
T ss_pred             EEEEccccC-CCCCccccCcCcccCCCCceE-------EEccCCcceeeEEechHHeEECcCCCCHHHHh-hhchHHHHH
Confidence            998776664 999999999999999765432       22247999999999999999999999998876 556778888


Q ss_pred             hhhhccCCCCCCCeEEEEecChHHHHHHHHHHH-cCCe-EEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhC---C
Q 018382          170 SPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKA-MGHH-VTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAAD---S  244 (357)
Q Consensus       170 ~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~-~g~~-V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~---~  244 (357)
                      .++ ....+++|++|+|+|+|++|++++|+|+. +|++ ++++++++++.+.+++ +|++++++.++.+..+.+..   +
T Consensus       151 ~~~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~~-~Ga~~~i~~~~~~~~~~~~~~g~~  228 (339)
T PRK10083        151 NVT-GRTGPTEQDVALIYGAGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKE-SGADWVINNAQEPLGEALEEKGIK  228 (339)
T ss_pred             HHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHH-hCCcEEecCccccHHHHHhcCCCC
Confidence            654 44556999999999999999999999996 5995 6667777788877777 99999998876544444432   4


Q ss_pred             ccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCcccchHHHhhccceEEEEeecCHHHHHHHHHHHHhcCCCc--cE
Q 018382          245 LDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTS--MI  322 (357)
Q Consensus       245 ~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~--~i  322 (357)
                      +|++||++|....+..++++++++|+++.+|.......+....+..+++++.+... ..+.++.++++++++.+.+  .+
T Consensus       229 ~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~l~~~~~~  307 (339)
T PRK10083        229 PTLIIDAACHPSILEEAVTLASPAARIVLMGFSSEPSEIVQQGITGKELSIFSSRL-NANKFPVVIDWLSKGLIDPEKLI  307 (339)
T ss_pred             CCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCceecHHHHhhcceEEEEEec-ChhhHHHHHHHHHcCCCChHHhe
Confidence            67999999975578899999999999999987654333344444567778777764 3467899999999999987  35


Q ss_pred             -EEeecccHHHHHHHHHcCC-ccEEEEEecCC
Q 018382          323 -EVIKMDYVNKAFERLEKND-VRYRFVVDVAG  352 (357)
Q Consensus       323 -~~~~~~~~~~a~~~~~~~~-~~Gkvvi~~~~  352 (357)
                       ++|+++++++|++.+++++ ..+|+++++.+
T Consensus       308 ~~~~~l~~~~~a~~~~~~~~~~~~kvvv~~~~  339 (339)
T PRK10083        308 THTFDFQHVADAIELFEKDQRHCCKVLLTFAE  339 (339)
T ss_pred             eeeecHHHHHHHHHHHhcCCCceEEEEEecCC
Confidence             8999999999999998654 56999998753

>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases

Probab=100.00  E-value=1.1e-42  Score=325.33  Aligned_cols=338  Identities=24%  Similarity=0.366  Sum_probs=271.0

Q ss_pred             hheeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCC
Q 018382            8 RATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKV   87 (357)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~   87 (357)
                      .++++.++..+++.++++++|.|+|.++||+||+.++++|++|++.+.|..+ ..+|.++|||++|+|+++|++++.|++
T Consensus         6 ~~~~a~~~~~~~~~~~l~~~p~p~~~~~~vlvkv~~~gi~~~D~~~~~g~~~-~~~p~v~G~e~~G~V~~vG~~v~~~~~   84 (373)
T cd08299           6 IKCKAAVLWEPKKPFSIEEIEVAPPKAHEVRIKIVATGICRSDDHVVSGKLV-TPFPVILGHEAAGIVESVGEGVTTVKP   84 (373)
T ss_pred             ceeEEEEEecCCCCcEEEEeecCCCCCCEEEEEEEEEEcCcccHHHhcCCCC-CCCCccccccceEEEEEeCCCCccCCC
Confidence            3466777766777899999999999999999999999999999999988763 356889999999999999999999999


Q ss_pred             CCEEEEccccCCCCCCcccccCcccccccccccC-ccccC--------CCC-----CCCCccceEEEeeCcceEECCCCC
Q 018382           88 GDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSY-NDVYT--------DGK-----PTQGGFAESMVVDQKFVVKIPDGM  153 (357)
Q Consensus        88 Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~--------~~~-----~~~G~~~~~~~v~~~~~~~lP~~l  153 (357)
                      ||+|++.+ ..+||.|.+|..+.++.|+...... .+...        .|.     ...|+|+||++++.+.++++|+++
T Consensus        85 Gd~V~~~~-~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~e~~~v~~~~~~~lP~~l  163 (373)
T cd08299          85 GDKVIPLF-VPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFTCKGKPIHHFLGTSTFSEYTVVDEIAVAKIDAAA  163 (373)
T ss_pred             CCEEEECC-CCCCCCChhhhCCCcccCcCcccccccccccCCccccccCCcccccccCCCcccceEEecccceeeCCCCC
Confidence            99997654 6689999999999999998765321 11111        111     136899999999999999999999


Q ss_pred             CccccccccchhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCcEEEcC
Q 018382          154 ALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGADQYLVS  232 (357)
Q Consensus       154 ~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~~vv~~  232 (357)
                      ++++++++++++.+||.++.....++++++|||+|+|++|++++++|+..|+ +|+++++++++.+.+++ +|++++++.
T Consensus       164 ~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a~~-lGa~~~i~~  242 (373)
T cd08299         164 PLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSAIMGCKAAGASRIIAVDINKDKFAKAKE-LGATECINP  242 (373)
T ss_pred             ChHHhheeccchHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH-cCCceEecc
Confidence            9999999999999999987777777999999999989999999999999999 89999999999998877 999999886


Q ss_pred             CChh-----HHHHhh-CCccEEEEcCCCCCChHHHHhcc-ccCCeEEEEccCCCC--cccchHHHhhccceEEEEeecCH
Q 018382          233 SDAT-----RMQEAA-DSLDYIIDTVPANHPLEPYLSLL-KLDGKLILTGVINTP--MQFLTPMVMLGRKAITGSFIGSM  303 (357)
Q Consensus       233 ~~~~-----~~~~~~-~~~d~v~d~~g~~~~~~~~~~~l-~~~G~~v~~g~~~~~--~~~~~~~~~~~~~~i~g~~~~~~  303 (357)
                      .+.+     .+.++. +++|++||++|....+..++..+ +++|+++.+|.....  ..+... .+.++.++.+++....
T Consensus       243 ~~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~  321 (373)
T cd08299         243 QDYKKPIQEVLTEMTDGGVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPSSQNLSINPM-LLLTGRTWKGAVFGGW  321 (373)
T ss_pred             cccchhHHHHHHHHhCCCCeEEEECCCCcHHHHHHHHhhccCCCEEEEEccCCCCceeecCHH-HHhcCCeEEEEEecCC
Confidence            5422     222222 37999999999754667766654 679999999876432  223332 2346678888876533


Q ss_pred             ---HHHHHHHHHHHhcCCC--ccE-EEeecccHHHHHHHHHcCCccEEEEEec
Q 018382          304 ---KETKEMLEFCREKGVT--SMI-EVIKMDYVNKAFERLEKNDVRYRFVVDV  350 (357)
Q Consensus       304 ---~~~~~~~~~~~~~~l~--~~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~  350 (357)
                         +.+.++++.+.++.++  +.+ ++|+++++++|++.+++++. .|+++++
T Consensus       322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~~a~~~~~~~~~-~k~~~~~  373 (373)
T cd08299         322 KSKDSVPKLVADYMAKKFNLDPLITHTLPFEKINEGFDLLRSGKS-IRTVLTF  373 (373)
T ss_pred             ccHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCc-ceEEEeC
Confidence               4666777777777544  345 89999999999999987765 5877753

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically

>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional

Probab=100.00  E-value=2.3e-42  Score=319.75  Aligned_cols=330  Identities=27%  Similarity=0.494  Sum_probs=276.6

Q ss_pred             eeeehccCCCCCcc-eeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCCC
Q 018382           10 TIGWAAKDPSGILS-PYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVG   88 (357)
Q Consensus        10 ~~~~~~~~~~~~~~-~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~G   88 (357)
                      |+++.... ++... ++++|.|+|.++||+||+.++++|++|++.+.|..+. ..|.++|||++|+|+++|++++.|++|
T Consensus         1 mka~~~~~-~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~d~~~~~g~~~~-~~~~~~g~e~~G~V~~~G~~v~~~~~G   78 (338)
T PRK09422          1 MKAAVVNK-DHTGDVVVEKTLRPLKHGEALVKMEYCGVCHTDLHVANGDFGD-KTGRILGHEGIGIVKEVGPGVTSLKVG   78 (338)
T ss_pred             CeEEEecC-CCCCceEEEecCCCCCCCeEEEEEEEEeechhHHHHHcCCCCC-CCCccCCcccceEEEEECCCCccCCCC
Confidence            45566553 33444 8899999999999999999999999999998886543 236789999999999999999999999


Q ss_pred             CEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhhh
Q 018382           89 DKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTV  168 (357)
Q Consensus        89 d~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta  168 (357)
                      |+|++.++...||.|..|..+..+.|.....       .|....|+|+||+.++.++++++|++++++++++++..+.||
T Consensus        79 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~l~~~~~ta  151 (338)
T PRK09422         79 DRVSIAWFFEGCGHCEYCTTGRETLCRSVKN-------AGYTVDGGMAEQCIVTADYAVKVPEGLDPAQASSITCAGVTT  151 (338)
T ss_pred             CEEEEccCCCCCCCChhhcCCCcccCCCccc-------cCccccCcceeEEEEchHHeEeCCCCCCHHHeehhhcchhHH
Confidence            9998888888899999999999999986532       133457999999999999999999999999999999999999


Q ss_pred             hhhhhccCCCCCCCeEEEEecChHHHHHHHHHHH-cCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCC-hh---HHHHhhC
Q 018382          169 FSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKA-MGHHVTVISSSDKKRVEAMEHLGADQYLVSSD-AT---RMQEAAD  243 (357)
Q Consensus       169 ~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~-~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~-~~---~~~~~~~  243 (357)
                      |+++. ...++++++|||+|+|++|++++++|+. .|++|+++++++++.+.+++ +|++.+++.+. .+   .+.+..+
T Consensus       152 ~~~~~-~~~~~~g~~vlV~g~g~vG~~~~~la~~~~g~~v~~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~v~~~~~  229 (338)
T PRK09422        152 YKAIK-VSGIKPGQWIAIYGAGGLGNLALQYAKNVFNAKVIAVDINDDKLALAKE-VGADLTINSKRVEDVAKIIQEKTG  229 (338)
T ss_pred             HHHHH-hcCCCCCCEEEEECCcHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHH-cCCcEEecccccccHHHHHHHhcC
Confidence            99984 4456999999999999999999999998 49999999999999998866 99999988754 32   2333445


Q ss_pred             CccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCcccchHHHhhccceEEEEeecCHHHHHHHHHHHHhcCCCccEE
Q 018382          244 SLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIE  323 (357)
Q Consensus       244 ~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~~i~  323 (357)
                      ++|+++++.++...+..++++++++|+++.+|.......++...+..+..++.++.....+.++.+++++.++.+.+.++
T Consensus       230 ~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~v~  309 (338)
T PRK09422        230 GAHAAVVTAVAKAAFNQAVDAVRAGGRVVAVGLPPESMDLSIPRLVLDGIEVVGSLVGTRQDLEEAFQFGAEGKVVPKVQ  309 (338)
T ss_pred             CCcEEEEeCCCHHHHHHHHHhccCCCEEEEEeeCCCCceecHHHHhhcCcEEEEecCCCHHHHHHHHHHHHhCCCCccEE
Confidence            78855555445447899999999999999998765444455555666788888877666788999999999999977677


Q ss_pred             EeecccHHHHHHHHHcCCccEEEEEec
Q 018382          324 VIKMDYVNKAFERLEKNDVRYRFVVDV  350 (357)
Q Consensus       324 ~~~~~~~~~a~~~~~~~~~~Gkvvi~~  350 (357)
                      .++++++++|++.+.+++..||++++.
T Consensus       310 ~~~~~~~~~a~~~~~~~~~~gkvvv~~  336 (338)
T PRK09422        310 LRPLEDINDIFDEMEQGKIQGRMVIDF  336 (338)
T ss_pred             EEcHHHHHHHHHHHHcCCccceEEEec
Confidence            799999999999999999999999865

>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase

Probab=100.00  E-value=1.5e-42  Score=323.88  Aligned_cols=337  Identities=26%  Similarity=0.385  Sum_probs=276.1

Q ss_pred             hheeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCC
Q 018382            8 RATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKV   87 (357)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~   87 (357)
                      |+|+++++.+.++++++++++.|++.++||+||+.++++|++|+++..|.++ ..+|.++|+|++|+|+++|+++++|++
T Consensus         1 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~~v~Vkv~a~gi~~~d~~~~~g~~~-~~~p~v~G~e~~G~V~~vG~~v~~~~~   79 (365)
T cd08278           1 MKTTAAVVREPGGPFVLEDVELDDPRPDEVLVRIVATGICHTDLVVRDGGLP-TPLPAVLGHEGAGVVEAVGSAVTGLKP   79 (365)
T ss_pred             CccEEeeeccCCCcceEEEeecCCCCCCeEEEEEEEeecCcccHHHhcCCCC-CCCCcccccceeEEEEEeCCCcccCCC
Confidence            4678888776556788999999999999999999999999999999988765 346789999999999999999999999


Q ss_pred             CCEEEEccccCCCCCCcccccCccccccccccc-CccccCCC---------------CCCCCccceEEEeeCcceEECCC
Q 018382           88 GDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWS-YNDVYTDG---------------KPTQGGFAESMVVDQKFVVKIPD  151 (357)
Q Consensus        88 Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~---------------~~~~G~~~~~~~v~~~~~~~lP~  151 (357)
                      ||+|++.+  ..||.|..|..+..++|...... +.+...+|               ....|+|++|+.+++++++++|+
T Consensus        80 Gd~V~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~iP~  157 (365)
T cd08278          80 GDHVVLSF--ASCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKVDK  157 (365)
T ss_pred             CCEEEEcc--cCCCCChHHhCCCcccccCcccccccccccCCcccccccCCcccccccccccceeeEEEecchhEEECCC
Confidence            99998765  36999999999999999865422 11111110               11358999999999999999999


Q ss_pred             CCCccccccccchhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCcEEE
Q 018382          152 GMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGADQYL  230 (357)
Q Consensus       152 ~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~~vv  230 (357)
                      ++++++++.+++++.|||.++.....++++++|||+|+|++|++++|+|+..|+ .|+++++++++.+.+++ +|+++++
T Consensus       158 ~~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~vG~~~~~la~~~G~~~v~~~~~~~~k~~~~~~-~g~~~~i  236 (365)
T cd08278         158 DVPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFGAGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAKE-LGATHVI  236 (365)
T ss_pred             CCCHHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH-cCCcEEe
Confidence            999999999999999999998777777999999999889999999999999999 58888888888777766 9999999


Q ss_pred             cCCChhHH---HHh-hCCccEEEEcCCCCCChHHHHhccccCCeEEEEccCC--CCcccchHHHhhccceEEEEeecC--
Q 018382          231 VSSDATRM---QEA-ADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVIN--TPMQFLTPMVMLGRKAITGSFIGS--  302 (357)
Q Consensus       231 ~~~~~~~~---~~~-~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~--~~~~~~~~~~~~~~~~i~g~~~~~--  302 (357)
                      +.++.+..   .+. ..++|+++||+|....+..++++++++|+++.+|...  ....++...++.++.++.++....  
T Consensus       237 ~~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  316 (365)
T cd08278         237 NPKEEDLVAAIREITGGGVDYALDTTGVPAVIEQAVDALAPRGTLALVGAPPPGAEVTLDVNDLLVSGKTIRGVIEGDSV  316 (365)
T ss_pred             cCCCcCHHHHHHHHhCCCCcEEEECCCCcHHHHHHHHHhccCCEEEEeCcCCCCCccccCHHHHhhcCceEEEeecCCcC
Confidence            87764332   222 2479999999997657899999999999999998753  223455555557888888776432  


Q ss_pred             -HHHHHHHHHHHHhcCCCc-c-EEEeecccHHHHHHHHHcCCccEEEEEe
Q 018382          303 -MKETKEMLEFCREKGVTS-M-IEVIKMDYVNKAFERLEKNDVRYRFVVD  349 (357)
Q Consensus       303 -~~~~~~~~~~~~~~~l~~-~-i~~~~~~~~~~a~~~~~~~~~~Gkvvi~  349 (357)
                       .+.++++++++.++.+.. . ++.|+++++++|++.+++++.. |++|+
T Consensus       317 ~~~~~~~~~~~l~~g~l~~~~~~~~~~l~~~~~a~~~~~~~~~~-k~~~~  365 (365)
T cd08278         317 PQEFIPRLIELYRQGKFPFDKLVTFYPFEDINQAIADSESGKVI-KPVLR  365 (365)
T ss_pred             hHHHHHHHHHHHHcCCCChHHheEEecHHHHHHHHHHHHCCCce-EEEEC
Confidence             345688899999998864 3 4889999999999999987764 77764

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu

>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase

Probab=100.00  E-value=1.8e-42  Score=322.02  Aligned_cols=331  Identities=29%  Similarity=0.463  Sum_probs=281.0

Q ss_pred             eeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCC------------CCCCCCccCccccEEEEE
Q 018382           10 TIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLG------------MSNYPMVPGHEVVGEVKE   77 (357)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~------------~~~~p~~lG~e~~G~V~~   77 (357)
                      |+++.+...+.++++.++|.|+++++||+||+.++++|++|++.+.|.++            ...+|.++|+|++|+|++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~p~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~   80 (350)
T cd08240           1 MKAAAVVEPGKPLEEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGHEIVGEVVA   80 (350)
T ss_pred             CeeEEeccCCCCceEEecCCCCCCCCeEEEEEEEEecCchhHHHHcCCCCccccccccccccCCCCCcccccceeEEEEe
Confidence            45676655556688999999999999999999999999999999887653            223467899999999999


Q ss_pred             eCCCCCCCCCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccc
Q 018382           78 VGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQ  157 (357)
Q Consensus        78 vG~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~  157 (357)
                      +|++++++++||+|++.++. .|+.|..|.++..+.|..+...       |....|++++|+.++.+.++++|+++++++
T Consensus        81 vG~~v~~~~~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~~~~~~~~~~p~~~s~~~  152 (350)
T cd08240          81 VGPDAADVKVGDKVLVYPWI-GCGECPVCLAGDENLCAKGRAL-------GIFQDGGYAEYVIVPHSRYLVDPGGLDPAL  152 (350)
T ss_pred             eCCCCCCCCCCCEEEECCcC-CCCCChHHHCcCcccCCCCCce-------eeeccCcceeeEEecHHHeeeCCCCCCHHH
Confidence            99999999999999877666 6899999999999999765332       123579999999999999999999999999


Q ss_pred             cccccchhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCcEEEcCCChh
Q 018382          158 AAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGADQYLVSSDAT  236 (357)
Q Consensus       158 aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~  236 (357)
                      ++++++.+.|||.++.....++++++|||+|+|++|++++|+|+..|+ +|+++++++++.+.+.+ +|++.+++.++.+
T Consensus       153 aa~l~~~~~tA~~~~~~~~~~~~~~~vlI~g~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~  231 (350)
T cd08240         153 AATLACSGLTAYSAVKKLMPLVADEPVVIIGAGGLGLMALALLKALGPANIIVVDIDEAKLEAAKA-AGADVVVNGSDPD  231 (350)
T ss_pred             eehhhchhhhHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH-hCCcEEecCCCcc
Confidence            999999999999999888876789999999889999999999999999 78898888888888866 9998888876643


Q ss_pred             H---HHHhhC-CccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCcccchHHHhhccceEEEEeecCHHHHHHHHHH
Q 018382          237 R---MQEAAD-SLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEF  312 (357)
Q Consensus       237 ~---~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~  312 (357)
                      .   +.+... ++|++||++|....+..++++|+++|+++.++...............++.++.+......+++..++++
T Consensus       232 ~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l  311 (350)
T cd08240         232 AAKRIIKAAGGGVDAVIDFVNNSATASLAFDILAKGGKLVLVGLFGGEATLPLPLLPLRALTIQGSYVGSLEELRELVAL  311 (350)
T ss_pred             HHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhcCCeEEEECCCCCCCcccHHHHhhcCcEEEEcccCCHHHHHHHHHH
Confidence            3   222223 799999999865478999999999999999987654433444445568889999888777889999999


Q ss_pred             HHhcCCCccE-EEeecccHHHHHHHHHcCCccEEEEEe
Q 018382          313 CREKGVTSMI-EVIKMDYVNKAFERLEKNDVRYRFVVD  349 (357)
Q Consensus       313 ~~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~  349 (357)
                      ++++.+++.. +.|+++++++|++.+++++..||++++
T Consensus       312 l~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  349 (350)
T cd08240         312 AKAGKLKPIPLTERPLSDVNDALDDLKAGKVVGRAVLK  349 (350)
T ss_pred             HHcCCCccceeeEEcHHHHHHHHHHHHcCCccceEEec
Confidence            9999988755 899999999999999999989999875

6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=100.00  E-value=1.8e-42  Score=326.69  Aligned_cols=335  Identities=18%  Similarity=0.231  Sum_probs=277.7

Q ss_pred             hhhheeeehcc----CCC-CCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCC----------CCCCCCccCcc
Q 018382            6 TERATIGWAAK----DPS-GILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLG----------MSNYPMVPGHE   70 (357)
Q Consensus         6 ~~~~~~~~~~~----~~~-~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~----------~~~~p~~lG~e   70 (357)
                      +|.+|++++..    +++ ..+++++++.|.++++||+||+.++++|++|++...|...          ....+.++|||
T Consensus         9 ~~~~~~a~~~~~~~~g~~~~~~~~~~~~~p~l~~~evlI~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~G~e   88 (393)
T cd08246           9 VPEKMYAFAIRPERYGDPAQAIQLEDVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYHIGGSD   88 (393)
T ss_pred             CchhhhheeeecccCCCcccceEEeecCCCCCCCCEEEEEEEEEeeccchhhhhcCCCccccccccccCCCCCccccccc
Confidence            57778887763    222 2477889999999999999999999999999988766411          11123588999


Q ss_pred             ccEEEEEeCCCCCCCCCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECC
Q 018382           71 VVGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIP  150 (357)
Q Consensus        71 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP  150 (357)
                      ++|+|+++|++++.|++||+|++.+.. .|+.|..|..+.+++|+...+.+.      ....|+|++|++++...++++|
T Consensus        89 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~-~~~~~~~c~~~~~~~~~~~~~~g~------~~~~g~~a~y~~v~~~~l~~iP  161 (393)
T cd08246          89 ASGIVWAVGEGVKNWKVGDEVVVHCSV-WDGNDPERAGGDPMFDPSQRIWGY------ETNYGSFAQFALVQATQLMPKP  161 (393)
T ss_pred             eEEEEEEeCCCCCcCCCCCEEEEeccc-cccCcccccccccccccccccccc------cCCCCcceeEEEechHHeEECC
Confidence            999999999999999999999765544 488999999999999986543321      1257999999999999999999


Q ss_pred             CCCCccccccccchhhhhhhhhhcc--CCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCc
Q 018382          151 DGMALEQAAPLLCAGVTVFSPLSHF--GLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGAD  227 (357)
Q Consensus       151 ~~l~~~~aa~~~~~~~ta~~~l~~~--~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~  227 (357)
                      +++++++++.+++.+.|||+++...  ..++++++|+|+|+ |++|++++++|+..|++++++++++++.+.+++ +|++
T Consensus       162 ~~l~~~~aa~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~~~~~-~G~~  240 (393)
T cd08246         162 KHLSWEEAAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYCRA-LGAE  240 (393)
T ss_pred             CCCCHHHHhhhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHH-cCCC
Confidence            9999999999999999999998654  55689999999997 999999999999999999999999999988877 9999


Q ss_pred             EEEcCCCh-------------------------hHHHHhhC---CccEEEEcCCCCCChHHHHhccccCCeEEEEccCCC
Q 018382          228 QYLVSSDA-------------------------TRMQEAAD---SLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINT  279 (357)
Q Consensus       228 ~vv~~~~~-------------------------~~~~~~~~---~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~  279 (357)
                      ++++.++.                         ..+.++.+   ++|++||++|.. .+..++++++++|+++.+|....
T Consensus       241 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~  319 (393)
T cd08246         241 GVINRRDFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGRA-TFPTSVFVCDRGGMVVICAGTTG  319 (393)
T ss_pred             EEEcccccccccccccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCchH-hHHHHHHHhccCCEEEEEcccCC
Confidence            98886432                         11222332   699999999986 78899999999999999986543


Q ss_pred             C-cccchHHHhhccceEEEEeecCHHHHHHHHHHHHhcCCCccE-EEeecccHHHHHHHHHcC-CccEEEEEe
Q 018382          280 P-MQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMI-EVIKMDYVNKAFERLEKN-DVRYRFVVD  349 (357)
Q Consensus       280 ~-~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~~i-~~~~~~~~~~a~~~~~~~-~~~Gkvvi~  349 (357)
                      . ..++...++.++.++.+++.+..+.+..++++++++.+.+.+ ++|+++++++|++.+.++ +..||+++-
T Consensus       320 ~~~~~~~~~l~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~~gkvvv~  392 (393)
T cd08246         320 YNHTYDNRYLWMRQKRIQGSHFANDREAAEANRLVMKGRIDPCLSKVFSLDETPDAHQLMHRNQHHVGNMAVL  392 (393)
T ss_pred             CCCCCcHHHHhhheeEEEecccCcHHHHHHHHHHHHcCCceeeeeEEEeHHHHHHHHHHHHhCccccceEEEe
Confidence            2 334555667788889998888888899999999999998766 899999999999999998 788998874

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases

Probab=100.00  E-value=2.6e-42  Score=320.99  Aligned_cols=333  Identities=21%  Similarity=0.232  Sum_probs=269.2

Q ss_pred             eeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCCCC
Q 018382           10 TIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGD   89 (357)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd   89 (357)
                      |+++.+.+ ++.+.+++++.|.+.++||+||+.++++|++|++...+..+....|.++|||++|+|+++|+++++|++||
T Consensus         1 mka~~~~~-~~~~~l~~~~~p~~~~~evlIkv~a~~i~~~d~~~~~g~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd   79 (351)
T cd08285           1 MKAFAMLG-IGKVGWIEKPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGAPGERHGMILGHEAVGVVEEVGSEVKDFKPGD   79 (351)
T ss_pred             CceEEEcc-CCccEEEECCCCCCCCCeEEEEEEEEEechhhHHHhcCCCCCCCCCcccCcceEEEEEEecCCcCccCCCC
Confidence            45666653 45688889999999999999999999999999998887665446688999999999999999999999999


Q ss_pred             EEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCc--ceEECCCCCCccccccccchhhh
Q 018382           90 KVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQK--FVVKIPDGMALEQAAPLLCAGVT  167 (357)
Q Consensus        90 ~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~--~~~~lP~~l~~~~aa~~~~~~~t  167 (357)
                      +|++.+.. .|+.|..|..|.++.|.+..   .+.. .+....|+|+||+.++.+  .++++|+++++++++.++..+.|
T Consensus        80 ~V~~~~~~-~~~~c~~c~~g~~~~~~~~~---~~~~-~~~~~~g~~~~y~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~t  154 (351)
T cd08285          80 RVIVPAIT-PDWRSVAAQRGYPSQSGGML---GGWK-FSNFKDGVFAEYFHVNDADANLAPLPDGLTDEQAVMLPDMMST  154 (351)
T ss_pred             EEEEcCcC-CCCCCHHHHCcCcccCcCCC---CCcc-ccCCCCcceeEEEEcchhhCceEECCCCCCHHHhhhhccchhh
Confidence            99876554 69999999999999998742   0100 122357999999999974  89999999999999999999999


Q ss_pred             hhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHH---Hhh-
Q 018382          168 VFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQ---EAA-  242 (357)
Q Consensus       168 a~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~---~~~-  242 (357)
                      ||+++.. ..++++++|||+|+|++|++++|+|+..|+ .|+++++++++.+.+++ +|+++++++++.+..+   ... 
T Consensus       155 a~~~~~~-~~~~~g~~vlI~g~g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~-~g~~~~v~~~~~~~~~~i~~~~~  232 (351)
T cd08285         155 GFHGAEL-ANIKLGDTVAVFGIGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKE-YGATDIVDYKNGDVVEQILKLTG  232 (351)
T ss_pred             HHHHHHc-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH-cCCceEecCCCCCHHHHHHHHhC
Confidence            9999754 455999999999889999999999999999 58888888888777777 9999999877644333   333 


Q ss_pred             -CCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCc--ccch--HHHhhccceEEEEeec-CHHHHHHHHHHHHhc
Q 018382          243 -DSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPM--QFLT--PMVMLGRKAITGSFIG-SMKETKEMLEFCREK  316 (357)
Q Consensus       243 -~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~--~~~~--~~~~~~~~~i~g~~~~-~~~~~~~~~~~~~~~  316 (357)
                       .++|++||++|+...+..++++++++|+++.+|......  .++.  .....+..++.+.... +.+.++++++++.++
T Consensus       233 ~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g  312 (351)
T cd08285         233 GKGVDAVIIAGGGQDTFEQALKVLKPGGTISNVNYYGEDDYLPIPREEWGVGMGHKTINGGLCPGGRLRMERLASLIEYG  312 (351)
T ss_pred             CCCCcEEEECCCCHHHHHHHHHHhhcCCEEEEecccCCCceeecChhhhhhhccccEEEEeecCCccccHHHHHHHHHcC
Confidence             379999999998657889999999999999998765432  2221  1123455566665542 456789999999999


Q ss_pred             CCCc---cE-EEeecccHHHHHHHHHcCCc-cEEEEEec
Q 018382          317 GVTS---MI-EVIKMDYVNKAFERLEKNDV-RYRFVVDV  350 (357)
Q Consensus       317 ~l~~---~i-~~~~~~~~~~a~~~~~~~~~-~Gkvvi~~  350 (357)
                      ++++   .+ ++|+++++++|++.+++++. .+|++|++
T Consensus       313 ~i~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~~  351 (351)
T cd08285         313 RVDPSKLLTHHFFGFDDIEEALMLMKDKPDDLIKPVIIF  351 (351)
T ss_pred             CCChhhceeccccCHHHHHHHHHHHhcccCCeEEEEEeC
Confidence            9987   23 56999999999999998874 68999864

This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1

Probab=100.00  E-value=8.2e-42  Score=321.12  Aligned_cols=336  Identities=21%  Similarity=0.241  Sum_probs=275.2

Q ss_pred             eeeehccCCCCCcceeeeecCCC-CCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCCC
Q 018382           10 TIGWAAKDPSGILSPYTYTLRNT-GAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVG   88 (357)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~p~~-~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~G   88 (357)
                      |+++.+. +++.+++.+++.|.| .++||+||+.++++|++|+.++.|.++..++|.++|||++|+|+++|+++++|++|
T Consensus         1 m~a~~~~-~~~~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G   79 (386)
T cd08283           1 MKALVWH-GKGDVRVEEVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPGMKKGDILGHEFMGVVEEVGPEVRNLKVG   79 (386)
T ss_pred             CeeEEEe-cCCCceEEeCCCCCCCCCCeEEEEEEEEecchhhhhhhcCCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Confidence            4566666 467899999999998 49999999999999999999999987655678899999999999999999999999


Q ss_pred             CEEEEccccCCCCCCcccccCcccccccccccC--------ccccCCCC-----CCCCccceEEEeeCc--ceEECCCCC
Q 018382           89 DKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSY--------NDVYTDGK-----PTQGGFAESMVVDQK--FVVKIPDGM  153 (357)
Q Consensus        89 d~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~-----~~~G~~~~~~~v~~~--~~~~lP~~l  153 (357)
                      |+|++.+.. .||+|..|..+.++.|++.....        ......+.     ...|+|++|++++.+  .++++|+++
T Consensus        80 d~V~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~~~  158 (386)
T cd08283          80 DRVVVPFTI-ACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAGIFGYSHLTGGYAGGQAEYVRVPFADVGPFKIPDDL  158 (386)
T ss_pred             CEEEEcCcC-CCCCChhhcCCCcccCCCcccccccccccccccccccccccccCCCCCeeEEEEEcccccCeEEECCCCC
Confidence            999776555 49999999999999998754321        11111111     246999999999987  899999999


Q ss_pred             CccccccccchhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCcEEEcC
Q 018382          154 ALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGADQYLVS  232 (357)
Q Consensus       154 ~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~~vv~~  232 (357)
                      +++++++++..+++||+++ ....++++++|||+|+|.+|++++++|+..|+ +|+++++++++.+.+++ ++...++++
T Consensus       159 ~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~g~G~vG~~~~~la~~~g~~~vi~~~~~~~~~~~~~~-~~~~~vi~~  236 (386)
T cd08283         159 SDEKALFLSDILPTGYHAA-ELAEVKPGDTVAVWGCGPVGLFAARSAKLLGAERVIAIDRVPERLEMARS-HLGAETINF  236 (386)
T ss_pred             CHHHHhhhccchhhhHHHH-hhccCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH-cCCcEEEcC
Confidence            9999999999999999999 55667999999999889999999999999998 59999999999888888 633356766


Q ss_pred             CChh-HHHH---hhC--CccEEEEcCCCC---------------------CChHHHHhccccCCeEEEEccCCCC-cccc
Q 018382          233 SDAT-RMQE---AAD--SLDYIIDTVPAN---------------------HPLEPYLSLLKLDGKLILTGVINTP-MQFL  284 (357)
Q Consensus       233 ~~~~-~~~~---~~~--~~d~v~d~~g~~---------------------~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~  284 (357)
                      ...+ +...   ...  ++|++||++|+.                     ..++.++++++++|+++.++..... ..++
T Consensus       237 ~~~~~~~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~  316 (386)
T cd08283         237 EEVDDVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKGGTVSIIGVYGGTVNKFP  316 (386)
T ss_pred             CcchHHHHHHHHHcCCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccCCEEEEEcCCCCCcCccC
Confidence            5542 3333   222  799999999753                     2467889999999999999876442 3344


Q ss_pred             hHHHhhccceEEEEeecCHHHHHHHHHHHHhcCCCc--cE-EEeecccHHHHHHHHHcCC-ccEEEEEe
Q 018382          285 TPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTS--MI-EVIKMDYVNKAFERLEKND-VRYRFVVD  349 (357)
Q Consensus       285 ~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~--~i-~~~~~~~~~~a~~~~~~~~-~~Gkvvi~  349 (357)
                      ....+.++.++.+......+.++.++++++++.+.+  .+ +.|+++++++|++.+++++ ..+|++|+
T Consensus       317 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~  385 (386)
T cd08283         317 IGAAMNKGLTLRMGQTHVQRYLPRLLELIESGELDPSFIITHRLPLEDAPEAYKIFDKKEDGCIKVVLK  385 (386)
T ss_pred             HHHHHhCCcEEEeccCCchHHHHHHHHHHHcCCCChhHceEEEecHHHHHHHHHHHHhCCCCeEEEEec
Confidence            445678888988887666678999999999999986  35 8999999999999998877 45899985

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T

>PRK13771 putative alcohol dehydrogenase; Provisional

Probab=100.00  E-value=4.7e-42  Score=317.11  Aligned_cols=328  Identities=27%  Similarity=0.402  Sum_probs=277.9

Q ss_pred             eeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCCCC
Q 018382           10 TIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGD   89 (357)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd   89 (357)
                      |++++....+.++++++++.|.+.++|++||+.++++|++|++...|..+...+|.++|+|++|+|+++|++++.+++||
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~G~   80 (334)
T PRK13771          1 MKAVILPGFKQGYRIEEVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYPRMKYPVILGHEVVGTVEEVGENVKGFKPGD   80 (334)
T ss_pred             CeeEEEcCCCCCcEEEeCCCCCCCCCeEEEEEEEEeechhhHHHhcCCCCCCCCCeeccccceEEEEEeCCCCccCCCCC
Confidence            45666654445699999999999999999999999999999998888776556678899999999999999999999999


Q ss_pred             EEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhhhh
Q 018382           90 KVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVF  169 (357)
Q Consensus        90 ~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~  169 (357)
                      +|++.++ ..|+.|..|..+.++.|+...+.       |.+.+|++++|+.++.+.++++|+++++++++.+++.+.+||
T Consensus        81 ~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~l~~~~~~a~  152 (334)
T PRK13771         81 RVASLLY-APDGTCEYCRSGEEAYCKNRLGY-------GEELDGFFAEYAKVKVTSLVKVPPNVSDEGAVIVPCVTGMVY  152 (334)
T ss_pred             EEEECCC-CCCcCChhhcCCCcccCcccccc-------ccccCceeeeeeecchhceEECCCCCCHHHhhcccchHHHHH
Confidence            9977655 47999999999999999876432       234579999999999999999999999999999999999999


Q ss_pred             hhhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCCh-hHHHHhhCCccE
Q 018382          170 SPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDA-TRMQEAADSLDY  247 (357)
Q Consensus       170 ~~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~-~~~~~~~~~~d~  247 (357)
                      +++... .++++++|+|+|+ |.+|++++++++..|++|+++++++++.+.+++ + ++++++.++. +.+... .++|+
T Consensus       153 ~~~~~~-~~~~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~v~~~-~~~d~  228 (334)
T PRK13771        153 RGLRRA-GVKKGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAKIVSK-Y-ADYVIVGSKFSEEVKKI-GGADI  228 (334)
T ss_pred             HHHHhc-CCCCCCEEEEECCCccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-H-HHHhcCchhHHHHHHhc-CCCcE
Confidence            999887 6699999999987 999999999999999999999999998888866 7 7777665421 112222 37999


Q ss_pred             EEEcCCCCCChHHHHhccccCCeEEEEccCCCCcc--cchHHHhhccceEEEEeecCHHHHHHHHHHHHhcCCCccE-EE
Q 018382          248 IIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQ--FLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMI-EV  324 (357)
Q Consensus       248 v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~--~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~~i-~~  324 (357)
                      +||++|+. ....++++++++|+++.+|.......  ......+.++.++.+......+.++.++++++++.+++.+ ++
T Consensus       229 ~ld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  307 (334)
T PRK13771        229 VIETVGTP-TLEESLRSLNMGGKIIQIGNVDPSPTYSLRLGYIILKDIEIIGHISATKRDVEEALKLVAEGKIKPVIGAE  307 (334)
T ss_pred             EEEcCChH-HHHHHHHHHhcCCEEEEEeccCCCCCcccCHHHHHhcccEEEEecCCCHHHHHHHHHHHHcCCCcceEeee
Confidence            99999987 78899999999999999987543222  3333345678888887766778899999999999998766 89


Q ss_pred             eecccHHHHHHHHHcCCccEEEEEec
Q 018382          325 IKMDYVNKAFERLEKNDVRYRFVVDV  350 (357)
Q Consensus       325 ~~~~~~~~a~~~~~~~~~~Gkvvi~~  350 (357)
                      |+++++++|++.+++++..||+++++
T Consensus       308 ~~~~~~~~a~~~~~~~~~~~kvv~~~  333 (334)
T PRK13771        308 VSLSEIDKALEELKDKSRIGKILVKP  333 (334)
T ss_pred             EcHHHHHHHHHHHHcCCCcceEEEec
Confidence            99999999999999988889999865

>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.7e-41  Score=314.89  Aligned_cols=331  Identities=25%  Similarity=0.350  Sum_probs=282.4

Q ss_pred             eeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCCCC
Q 018382           10 TIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGD   89 (357)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd   89 (357)
                      |++|+....+.++++.+++.|.+.++||+||+.++++|++|+....|..+...+|.++|+|++|+|+++|++++.|++||
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~~G~~~~~~~~Gd   80 (345)
T cd08260           1 MRAAVYEEFGEPLEIREVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDPDVTLPHVPGHEFAGVVVEVGEDVSRWRVGD   80 (345)
T ss_pred             CeeEEEecCCCCcEEEEccCCCCCCCeEEEEEEEeeccHHHHHHhcCCCCCCCCCeeeccceeEEEEEECCCCccCCCCC
Confidence            46777755455688899999999999999999999999999999988766556688999999999999999999999999


Q ss_pred             EEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCc--ceEECCCCCCccccccccchhhh
Q 018382           90 KVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQK--FVVKIPDGMALEQAAPLLCAGVT  167 (357)
Q Consensus        90 ~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~--~~~~lP~~l~~~~aa~~~~~~~t  167 (357)
                      +|++ ++...||+|..|..|..+.|.++...       +....|++++|+++++.  .++++|+++++++++.++..+.+
T Consensus        81 ~V~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~v~~~~~~~~~iP~~~~~~~aa~l~~~~~t  152 (345)
T cd08260          81 RVTV-PFVLGCGTCPYCRAGDSNVCEHQVQP-------GFTHPGSFAEYVAVPRADVNLVRLPDDVDFVTAAGLGCRFAT  152 (345)
T ss_pred             EEEE-CCCCCCCCCccccCcCcccCCCCccc-------ccCCCCcceeEEEcccccCceEECCCCCCHHHhhhhccchHH
Confidence            9976 45567999999999999999986432       22247999999999975  99999999999999999999999


Q ss_pred             hhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCC-hhHHHH---hh-
Q 018382          168 VFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSD-ATRMQE---AA-  242 (357)
Q Consensus       168 a~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~-~~~~~~---~~-  242 (357)
                      ||+++.....+.++++|+|+|+|++|++++|+|+..|++|+++++++++.+.+++ +|++++++.+. .+....   .. 
T Consensus       153 a~~~l~~~~~~~~~~~vlV~g~g~vg~~~~~~a~~~G~~vi~~~~~~~~~~~~~~-~g~~~~i~~~~~~~~~~~~~~~~~  231 (345)
T cd08260         153 AFRALVHQARVKPGEWVAVHGCGGVGLSAVMIASALGARVIAVDIDDDKLELARE-LGAVATVNASEVEDVAAAVRDLTG  231 (345)
T ss_pred             HHHHHHHccCCCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHH-hCCCEEEccccchhHHHHHHHHhC
Confidence            9999877777789999999999999999999999999999999999999888877 99999998876 443322   22 


Q ss_pred             CCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCC---cccchHHHhhccceEEEEeecCHHHHHHHHHHHHhcCCC
Q 018382          243 DSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTP---MQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVT  319 (357)
Q Consensus       243 ~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~---~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~  319 (357)
                      +++|++||++|+.......+++++++|+++.+|.....   ..++...++.++.++.+......+.++.++++++++.+.
T Consensus       232 ~~~d~vi~~~g~~~~~~~~~~~l~~~g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~  311 (345)
T cd08260         232 GGAHVSVDALGIPETCRNSVASLRKRGRHVQVGLTLGEEAGVALPMDRVVARELEIVGSHGMPAHRYDAMLALIASGKLD  311 (345)
T ss_pred             CCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEeCCcCCCCCccccCHHHHhhcccEEEeCCcCCHHHHHHHHHHHHcCCCC
Confidence            27999999998644788899999999999999875432   234455566788899988777778899999999999887


Q ss_pred             cc--E-EEeecccHHHHHHHHHcCCccEEEEEe
Q 018382          320 SM--I-EVIKMDYVNKAFERLEKNDVRYRFVVD  349 (357)
Q Consensus       320 ~~--i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~  349 (357)
                      +.  + +.++++++++|++.+++++..||+|++
T Consensus       312 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~v~~  344 (345)
T cd08260         312 PEPLVGRTISLDEAPDALAAMDDYATAGITVIT  344 (345)
T ss_pred             hhhheeEEecHHHHHHHHHHHHcCCCCceEEec
Confidence            52  5 899999999999999999999998864

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=2.9e-41  Score=312.81  Aligned_cols=331  Identities=33%  Similarity=0.528  Sum_probs=282.3

Q ss_pred             eeehccCC-CCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCC-CCCCCCccCccccEEEEEeCCCCCCCCCC
Q 018382           11 IGWAAKDP-SGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLG-MSNYPMVPGHEVVGEVKEVGSEVSNFKVG   88 (357)
Q Consensus        11 ~~~~~~~~-~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~-~~~~p~~lG~e~~G~V~~vG~~v~~~~~G   88 (357)
                      +++++... +..+.+.+++.|.|.++|++||+.+.++|++|+.++.|.++ ....+.++|+|++|+|+++|++++.|++|
T Consensus         2 ~a~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~vG~~~~~~~~G   81 (341)
T cd08297           2 KAAVVEEFGEKPYEVKDVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWPVKPKLPLIGGHEGAGVVVAVGPGVSGLKVG   81 (341)
T ss_pred             ceEEeeccCCCCceEEEeeCCCCCCCeEEEEEEEeecchhHHHHHcCCCCcCCCCCccCCcccceEEEEeCCCCCCCCCC
Confidence            45554422 35788999999999999999999999999999999888664 23446678999999999999999999999


Q ss_pred             CEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhhh
Q 018382           89 DKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTV  168 (357)
Q Consensus        89 d~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta  168 (357)
                      |+|+..+...+||.|..|..++.+.|+.+...       |....|++++|+.++.+.++++|++++++++++++..+.||
T Consensus        82 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~s~~~~~~~~~~~lp~~~~~~~~a~l~~~~~ta  154 (341)
T cd08297          82 DRVGVKWLYDACGKCEYCRTGDETLCPNQKNS-------GYTVDGTFAEYAIADARYVTPIPDGLSFEQAAPLLCAGVTV  154 (341)
T ss_pred             CEEEEecCCCCCCCCccccCCCcccCCCcccc-------ccccCCcceeEEEeccccEEECCCCCCHHHHHHHHcchHHH
Confidence            99988877788999999999999999875433       23457899999999999999999999999999999999999


Q ss_pred             hhhhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHH---hh--
Q 018382          169 FSPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQE---AA--  242 (357)
Q Consensus       169 ~~~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~---~~--  242 (357)
                      |.++... .++++++|||+|+ +.+|++++++|+..|++|+++++++++.+.+.+ +|++++++.++.+...+   ..  
T Consensus       155 ~~~~~~~-~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~~~~~~  232 (341)
T cd08297         155 YKALKKA-GLKPGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELAKE-LGADAFVDFKKSDDVEAVKELTGG  232 (341)
T ss_pred             HHHHHhc-CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH-cCCcEEEcCCCccHHHHHHHHhcC
Confidence            9998776 5699999999987 679999999999999999999999999888866 99999998876544333   32  


Q ss_pred             CCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCC-cccchHHHhhccceEEEEeecCHHHHHHHHHHHHhcCCCcc
Q 018382          243 DSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTP-MQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSM  321 (357)
Q Consensus       243 ~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~~  321 (357)
                      +++|++||+.+....+..++++++++|+++.+|..... ..++...++.++.++.+......+.++.+++++.++.+.+.
T Consensus       233 ~~vd~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  312 (341)
T cd08297         233 GGAHAVVVTAVSAAAYEQALDYLRPGGTLVCVGLPPGGFIPLDPFDLVLRGITIVGSLVGTRQDLQEALEFAARGKVKPH  312 (341)
T ss_pred             CCCCEEEEcCCchHHHHHHHHHhhcCCEEEEecCCCCCCCCCCHHHHHhcccEEEEeccCCHHHHHHHHHHHHcCCCcce
Confidence            37999999777655788999999999999999865533 24555566688899988777667889999999999999876


Q ss_pred             EEEeecccHHHHHHHHHcCCccEEEEEec
Q 018382          322 IEVIKMDYVNKAFERLEKNDVRYRFVVDV  350 (357)
Q Consensus       322 i~~~~~~~~~~a~~~~~~~~~~Gkvvi~~  350 (357)
                      ++.|+++++++|++.+.+++..||+++++
T Consensus       313 ~~~~~~~~~~~a~~~~~~~~~~gkvvi~~  341 (341)
T cd08297         313 IQVVPLEDLNEVFEKMEEGKIAGRVVVDF  341 (341)
T ss_pred             eEEEcHHHHHHHHHHHHcCCccceEEEeC
Confidence            68899999999999999999999999875

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=100.00  E-value=6.7e-42  Score=314.78  Aligned_cols=291  Identities=21%  Similarity=0.251  Sum_probs=243.9

Q ss_pred             CCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCC-CCCCCCccCccccEEEEEeCCCCCC-CCCCCEEEEcccc
Q 018382           20 GILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLG-MSNYPMVPGHEVVGEVKEVGSEVSN-FKVGDKVGVGVLV   97 (357)
Q Consensus        20 ~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~-~~~~p~~lG~e~~G~V~~vG~~v~~-~~~Gd~V~~~~~~   97 (357)
                      ..+++.++|.|.|+++||+||+.++++|++|++.+.|.++ ...+|.++|||++|+|+++|+++++ |++||+|++..  
T Consensus        16 ~~~~~~~~~~p~~~~~evlv~v~~~gi~~~d~~~~~g~~~~~~~~p~v~G~e~~G~V~~vG~~v~~~~~vGd~V~~~~--   93 (324)
T cd08291          16 KELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGSTKALPVPPGFEGSGTVVAAGGGPLAQSLIGKRVAFLA--   93 (324)
T ss_pred             cEEEecccCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCcCCCcceEEEEEEECCCccccCCCCCEEEecC--
Confidence            3577889999999999999999999999999999988764 2356889999999999999999996 99999997531  


Q ss_pred             CCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhhhhhhhhccCC
Q 018382           98 GCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGL  177 (357)
Q Consensus        98 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~  177 (357)
                                                      ..+|+|+||++++++.++++|+++++++++++++.+.|||.++.. ..
T Consensus        94 --------------------------------~~~g~~a~~~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~-~~  140 (324)
T cd08291          94 --------------------------------GSYGTYAEYAVADAQQCLPLPDGVSFEQGASSFVNPLTALGMLET-AR  140 (324)
T ss_pred             --------------------------------CCCCcchheeeecHHHeEECCCCCCHHHHhhhcccHHHHHHHHHh-hc
Confidence                                            015999999999999999999999999999999999999865543 33


Q ss_pred             CCCCCeEEEE-e-cChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHH---hh--CCccEEEE
Q 018382          178 KQSGLRGGIL-G-LGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQE---AA--DSLDYIID  250 (357)
Q Consensus       178 ~~~~~~VlI~-G-~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~---~~--~~~d~v~d  250 (357)
                       .++++++|+ | +|++|++++|+|+..|++|+++++++++.+.+++ +|++++++++..+..++   ..  .++|++||
T Consensus       141 -~~~~~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~~~-~g~~~~i~~~~~~~~~~v~~~~~~~~~d~vid  218 (324)
T cd08291         141 -EEGAKAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLLKK-IGAEYVLNSSDPDFLEDLKELIAKLNATIFFD  218 (324)
T ss_pred             -cCCCcEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cCCcEEEECCCccHHHHHHHHhCCCCCcEEEE
Confidence             256667775 4 5999999999999999999999999999888887 99999998876544333   33  27999999


Q ss_pred             cCCCCCChHHHHhccccCCeEEEEccCCCC-c-ccchHHHhhccceEEEEeecC------HHHHHHHHHHHHhcCCCccE
Q 018382          251 TVPANHPLEPYLSLLKLDGKLILTGVINTP-M-QFLTPMVMLGRKAITGSFIGS------MKETKEMLEFCREKGVTSMI  322 (357)
Q Consensus       251 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~-~~~~~~~~~~~~~i~g~~~~~------~~~~~~~~~~~~~~~l~~~i  322 (357)
                      ++|+. .....+++++++|+++.+|..... . .++...++.++.++.+++...      .+.++.++++++ +.+++.+
T Consensus       219 ~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i  296 (324)
T cd08291         219 AVGGG-LTGQILLAMPYGSTLYVYGYLSGKLDEPIDPVDLIFKNKSIEGFWLTTWLQKLGPEVVKKLKKLVK-TELKTTF  296 (324)
T ss_pred             CCCcH-HHHHHHHhhCCCCEEEEEEecCCCCcccCCHHHHhhcCcEEEEEEHHHhhcccCHHHHHHHHHHHh-Cccccce
Confidence            99987 677889999999999999865432 2 244556677899998887643      346778888887 8999888


Q ss_pred             -EEeecccHHHHHHHHHcCCccEEEEEe
Q 018382          323 -EVIKMDYVNKAFERLEKNDVRYRFVVD  349 (357)
Q Consensus       323 -~~~~~~~~~~a~~~~~~~~~~Gkvvi~  349 (357)
                       ++|+++|+.+||+.+.+++..||+++.
T Consensus       297 ~~~~~l~~~~~a~~~~~~~~~~Gkvv~~  324 (324)
T cd08291         297 ASRYPLALTLEAIAFYSKNMSTGKKLLI  324 (324)
T ss_pred             eeEEcHHHHHHHHHHHHhCCCCCeEEeC
Confidence             899999999999999999999999873

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase

Probab=100.00  E-value=3.3e-41  Score=314.80  Aligned_cols=335  Identities=24%  Similarity=0.397  Sum_probs=275.4

Q ss_pred             eeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCCCC
Q 018382           10 TIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGD   89 (357)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd   89 (357)
                      |++|++...+.++++.++++|++.++||+|++.++++|+.|+.++.|.++ ..+|.++|+|++|+|+++|++++.|++||
T Consensus         1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~i~~~d~~~~~g~~~-~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd   79 (363)
T cd08279           1 MRAAVLHEVGKPLEIEEVELDDPGPGEVLVRIAAAGLCHSDLHVVTGDLP-APLPAVLGHEGAGVVEEVGPGVTGVKPGD   79 (363)
T ss_pred             CeEEEEecCCCCceEEEeeCCCCCCCeEEEEEEEeecCcHHHHHhcCCCC-CCCCccccccceEEEEEeCCCccccCCCC
Confidence            46777765556788999999999999999999999999999999988765 35677899999999999999999999999


Q ss_pred             EEEEccccCCCCCCcccccCcccccccccccCccccCC--------C-----CCCCCccceEEEeeCcceEECCCCCCcc
Q 018382           90 KVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTD--------G-----KPTQGGFAESMVVDQKFVVKIPDGMALE  156 (357)
Q Consensus        90 ~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--------~-----~~~~G~~~~~~~v~~~~~~~lP~~l~~~  156 (357)
                      +|+.. ....||+|..|.+++.+.|.+..+...+-.++        |     ....|+|++|+.++++.++++|++++++
T Consensus        80 ~V~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~  158 (363)
T cd08279          80 HVVLS-WIPACGTCRYCSRGQPNLCDLGAGILGGQLPDGTRRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIPLD  158 (363)
T ss_pred             EEEEC-CCCCCCCChhhcCCCcccCcccccccccccCCCcccccccCccccccccCccceeeEEeccccEEECCCCCChH
Confidence            99665 44579999999999999998653221111111        1     1246999999999999999999999999


Q ss_pred             ccccccchhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCe-EEEEeCCcHHHHHHHHhcCCcEEEcCCCh
Q 018382          157 QAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHH-VTVISSSDKKRVEAMEHLGADQYLVSSDA  235 (357)
Q Consensus       157 ~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~-V~~~~~~~~~~~~~~~~~g~~~vv~~~~~  235 (357)
                      +++.+++.+.+||.++.....++++++|||+|+|++|++++++|+..|++ |+++++++++.+.+.+ +|++++++.+..
T Consensus       159 ~aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g~g~vG~a~i~lak~~G~~~Vi~~~~~~~~~~~~~~-~g~~~vv~~~~~  237 (363)
T cd08279         159 RAALLGCGVTTGVGAVVNTARVRPGDTVAVIGCGGVGLNAIQGARIAGASRIIAVDPVPEKLELARR-FGATHTVNASED  237 (363)
T ss_pred             HeehhcchhHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHH-hCCeEEeCCCCc
Confidence            99999999999999988777789999999998899999999999999996 9999998888887766 999999987764


Q ss_pred             hHHH---Hhh--CCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCC--CcccchHHHhhccceEEEEeec---CHHH
Q 018382          236 TRMQ---EAA--DSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINT--PMQFLTPMVMLGRKAITGSFIG---SMKE  305 (357)
Q Consensus       236 ~~~~---~~~--~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~~~i~g~~~~---~~~~  305 (357)
                      ....   ...  .++|++||+++....+..++++++++|+++.++....  ...++...+..++.++.+++..   ..+.
T Consensus       238 ~~~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  317 (363)
T cd08279         238 DAVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKGGTAVVVGMGPPGETVSLPALELFLSEKRLQGSLYGSANPRRD  317 (363)
T ss_pred             cHHHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcCCeEEEEecCCCCcccccCHHHHhhcCcEEEEEEecCcCcHHH
Confidence            3333   332  3799999999965578899999999999999976542  3345555555567777776542   3467


Q ss_pred             HHHHHHHHHhcCCCc--cE-EEeecccHHHHHHHHHcCCccEEEE
Q 018382          306 TKEMLEFCREKGVTS--MI-EVIKMDYVNKAFERLEKNDVRYRFV  347 (357)
Q Consensus       306 ~~~~~~~~~~~~l~~--~i-~~~~~~~~~~a~~~~~~~~~~Gkvv  347 (357)
                      ++++++++.++.+++  .+ ++|+++++++|++.+++++..+.++
T Consensus       318 ~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~  362 (363)
T cd08279         318 IPRLLDLYRAGRLKLDELVTRRYSLDEINEAFADMLAGENARGVI  362 (363)
T ss_pred             HHHHHHHHHcCCCCcceeEEEEEcHHHHHHHHHHHhcCCceeEEe
Confidence            889999999999886  35 8999999999999999888765554

Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=100.00  E-value=2.2e-41  Score=319.53  Aligned_cols=339  Identities=18%  Similarity=0.246  Sum_probs=279.8

Q ss_pred             hhhheeeehccC----CC-CCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCC----------CCCCC-CccCc
Q 018382            6 TERATIGWAAKD----PS-GILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLG----------MSNYP-MVPGH   69 (357)
Q Consensus         6 ~~~~~~~~~~~~----~~-~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~----------~~~~p-~~lG~   69 (357)
                      +|.+|++|++..    ++ +.+.+.+++.|.|+++|++||+.++++|++|++...+...          ....| .++||
T Consensus         4 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~p~l~~~evlV~v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~G~   83 (398)
T TIGR01751         4 VPETMYAFAIREERDGDPRQAIQLEVVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGRDDLPFHIIGS   83 (398)
T ss_pred             cchhhhheEEecccCCCcccceEEeecCCCCCCCCeEEEEEEEEecCchhhhhhcCCccchhhhhcccCCCCCCceeccc
Confidence            466778888732    22 4688889999999999999999999999999887655321          01123 37999


Q ss_pred             cccEEEEEeCCCCCCCCCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEEC
Q 018382           70 EVVGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKI  149 (357)
Q Consensus        70 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~l  149 (357)
                      |++|+|+++|++++.|++||+|++. ....|++|..|..+.++.|....+.  +.    ....|+|+||+.++.+.++++
T Consensus        84 e~~G~V~~vG~~v~~~~~Gd~V~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--g~----~~~~g~~ae~~~v~~~~~~~v  156 (398)
T TIGR01751        84 DASGVVWRVGPGVTRWKVGDEVVAS-CLQVDLTAPDGRVGDPMLSSEQRIW--GY----ETNFGSFAEFALVKDYQLMPK  156 (398)
T ss_pred             ceEEEEEEeCCCCCCCCCCCEEEEc-cccccCCchhhccCccccccccccc--cc----cCCCccceEEEEechHHeEEC
Confidence            9999999999999999999999665 4456899999999999999764321  10    125789999999999999999


Q ss_pred             CCCCCccccccccchhhhhhhhhhc--cCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCC
Q 018382          150 PDGMALEQAAPLLCAGVTVFSPLSH--FGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGA  226 (357)
Q Consensus       150 P~~l~~~~aa~~~~~~~ta~~~l~~--~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~  226 (357)
                      |+++++++++.+.+.+.+||.++..  ...++++++|+|+|+ |++|++++++|+..|++++++++++++.+.+++ +|+
T Consensus       157 P~~l~~~~aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~~~~~~-~g~  235 (398)
T TIGR01751       157 PKHLTWEEAACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAEYCRE-LGA  235 (398)
T ss_pred             CCCCCHHHHhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHH-cCC
Confidence            9999999999999999999999865  455689999999997 999999999999999999998888888888887 999


Q ss_pred             cEEEcCCChh----------------------H---HHHhh--CCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCC
Q 018382          227 DQYLVSSDAT----------------------R---MQEAA--DSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINT  279 (357)
Q Consensus       227 ~~vv~~~~~~----------------------~---~~~~~--~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~  279 (357)
                      +.++|.++.+                      .   +.+..  +++|++|||+|.. .+..++++++++|+++.+|....
T Consensus       236 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~  314 (398)
T TIGR01751       236 EAVIDRNDFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGRA-TFPTSVFVCRRGGMVVICGGTTG  314 (398)
T ss_pred             CEEecCCCcchhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcHH-HHHHHHHhhccCCEEEEEccccC
Confidence            9999865321                      1   11222  3699999999976 78899999999999999987654


Q ss_pred             C-cccchHHHhhccceEEEEeecCHHHHHHHHHHHHhcCCCccE-EEeecccHHHHHHHHHcCCccEEEEEecCCC
Q 018382          280 P-MQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMI-EVIKMDYVNKAFERLEKNDVRYRFVVDVAGS  353 (357)
Q Consensus       280 ~-~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~~~~  353 (357)
                      . ..++...++.++.++.++.....++++++++++.++.+.+.+ +++++++++++++.+.+++..||+++++...
T Consensus       315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~~~~  390 (398)
T TIGR01751       315 YNHDYDNRYLWMRQKRIQGSHFANLREAWEANRLVAKGRIDPTLSKVYPLEEIGQAHQDVHRNHHQGNVAVLVLAP  390 (398)
T ss_pred             CCCCcCHHHHhhcccEEEccccCcHHHHHHHHHHHHCCCcccceeeEEcHHHHHHHHHHHHcCCCCceEEEEeCCC
Confidence            3 344555566778888888877778889999999999998777 8999999999999999999999999998654

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-41  Score=314.01  Aligned_cols=293  Identities=19%  Similarity=0.204  Sum_probs=240.8

Q ss_pred             Ccceee---eecC-CCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCc--cccEEEEEeCCCCCCCCCCCEEEEc
Q 018382           21 ILSPYT---YTLR-NTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGH--EVVGEVKEVGSEVSNFKVGDKVGVG   94 (357)
Q Consensus        21 ~~~~~~---~~~p-~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~--e~~G~V~~vG~~v~~~~~Gd~V~~~   94 (357)
                      .|++++   .+.| ++++||||||+.++++||.|+....+..+...+|.++|+  |++|+|..+|+++++|++||+|+. 
T Consensus        26 ~f~~~~~~~~~~~~~~~~gevlVkv~a~~inp~~~~~~~~~~~~~~~p~~~G~~~~~~G~v~~vg~~v~~~~~Gd~V~~-  104 (348)
T PLN03154         26 DMEVKLGNKIELKAPKGSGAFLVKNLYLSCDPYMRGRMRDFHDSYLPPFVPGQRIEGFGVSKVVDSDDPNFKPGDLISG-  104 (348)
T ss_pred             cEEEEeecccCCCCCCCCCeEEEEEEEEccCHHHHHhhhccCCCCCCCcCCCCeeEeeEEEEEEecCCCCCCCCCEEEe-
Confidence            466665   3555 458999999999999999998654432232345788998  889999999999999999999952 


Q ss_pred             cccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcc--eEE--CCCCCCcc-ccccccchhhhhh
Q 018382           95 VLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKF--VVK--IPDGMALE-QAAPLLCAGVTVF  169 (357)
Q Consensus        95 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~--~~~--lP~~l~~~-~aa~~~~~~~ta~  169 (357)
                                                           .|+|+||.+++...  +++  +|++++++ ++|+++++++|||
T Consensus       105 -------------------------------------~~~~aey~~v~~~~~~~~~~~~P~~~~~~~~aa~l~~~~~TA~  147 (348)
T PLN03154        105 -------------------------------------ITGWEEYSLIRSSDNQLRKIQLQDDIPLSYHLGLLGMAGFTAY  147 (348)
T ss_pred             -------------------------------------cCCcEEEEEEeccccceEEccCcCCCCHHHHHHHcccHHHHHH
Confidence                                                 36799999998753  544  59999986 6889999999999


Q ss_pred             hhhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCCh-hH---HHHhh-C
Q 018382          170 SPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDA-TR---MQEAA-D  243 (357)
Q Consensus       170 ~~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~-~~---~~~~~-~  243 (357)
                      .++.....+++|++|||+|+ |++|++++|+|+..|++|+++++++++.+.+++.+|+++++++++. +.   +.+.. +
T Consensus       148 ~al~~~~~~~~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~~  227 (348)
T PLN03154        148 AGFYEVCSPKKGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYKEEPDLDAALKRYFPE  227 (348)
T ss_pred             HHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhcCCCEEEECCCcccHHHHHHHHCCC
Confidence            99987777799999999987 9999999999999999999999998888888744999999988642 33   22332 3


Q ss_pred             CccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCc------ccchHHHhhccceEEEEeecC-----HHHHHHHHHH
Q 018382          244 SLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPM------QFLTPMVMLGRKAITGSFIGS-----MKETKEMLEF  312 (357)
Q Consensus       244 ~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~------~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~~  312 (357)
                      ++|++||++|+. .+..++++++++|+++.+|......      .++...++.+++++.|++...     .+.+++++++
T Consensus       228 gvD~v~d~vG~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~~~~~l  306 (348)
T PLN03154        228 GIDIYFDNVGGD-MLDAALLNMKIHGRIAVCGMVSLNSLSASQGIHNLYNLISKRIRMQGFLQSDYLHLFPQFLENVSRY  306 (348)
T ss_pred             CcEEEEECCCHH-HHHHHHHHhccCCEEEEECccccCCCCCCCCcccHHHHhhccceEEEEEHHHHHHHHHHHHHHHHHH
Confidence            799999999986 8899999999999999998754321      124455778899999987643     2457889999


Q ss_pred             HHhcCCCccE-EEeecccHHHHHHHHHcCCccEEEEEecCC
Q 018382          313 CREKGVTSMI-EVIKMDYVNKAFERLEKNDVRYRFVVDVAG  352 (357)
Q Consensus       313 ~~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~~~  352 (357)
                      +++|++++.+ ++|+|+++++|++.+++++..||+|+++..
T Consensus       307 ~~~G~l~~~~~~~~~L~~~~~A~~~l~~g~~~GKvVl~~~~  347 (348)
T PLN03154        307 YKQGKIVYIEDMSEGLESAPAALVGLFSGKNVGKQVIRVAK  347 (348)
T ss_pred             HHCCCccCceecccCHHHHHHHHHHHHcCCCCceEEEEecC
Confidence            9999999888 799999999999999999999999999854

>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases

Probab=100.00  E-value=4.8e-41  Score=313.80  Aligned_cols=333  Identities=25%  Similarity=0.381  Sum_probs=271.7

Q ss_pred             eeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCCCCE
Q 018382           11 IGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGDK   90 (357)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~   90 (357)
                      ++++...+++++.+++++.|.+.++||+||+.++++|++|++.+.|..+ ..+|.++|||++|+|+++|++++.+++||+
T Consensus         2 ~a~~~~~~~~~~~~~~~~~p~~~~~~vlv~v~~~~i~~~d~~~~~g~~~-~~~~~i~g~e~~G~V~~vG~~v~~~~~Gd~   80 (365)
T cd05279           2 KAAVLWEKGKPLSIEEIEVAPPKAGEVRIKVVATGVCHTDLHVIDGKLP-TPLPVILGHEGAGIVESIGPGVTTLKPGDK   80 (365)
T ss_pred             ceeEEecCCCCcEEEEeecCCCCCCeEEEEEEEeeecchhHHHhcCCCC-CCCCcccccceeEEEEEeCCCcccCCCCCE
Confidence            3555555666899999999999999999999999999999999988764 345789999999999999999999999999


Q ss_pred             EEEccccCCCCCCcccccCcccccccccccCc-cccCCC-------------CCCCCccceEEEeeCcceEECCCCCCcc
Q 018382           91 VGVGVLVGCCRNCRPCEADVEQYCNKKIWSYN-DVYTDG-------------KPTQGGFAESMVVDQKFVVKIPDGMALE  156 (357)
Q Consensus        91 V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~-------------~~~~G~~~~~~~v~~~~~~~lP~~l~~~  156 (357)
                      |++.+. .+|++|.+|..+.+++|....+.+. +...+|             ....|+|++|+.++++.++++|++++++
T Consensus        81 Vv~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~~~~~  159 (365)
T cd05279          81 VIPLFG-PQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKIDPDAPLE  159 (365)
T ss_pred             EEEcCC-CCCCCChhhcCCCcccCCCcccccccccccCCcceeeccCCccccccccccccceEEecCCceEECCCCCCHH
Confidence            977654 5799999999999999987664421 111111             1135799999999999999999999999


Q ss_pred             ccccccchhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCe-EEEEeCCcHHHHHHHHhcCCcEEEcCCCh
Q 018382          157 QAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHH-VTVISSSDKKRVEAMEHLGADQYLVSSDA  235 (357)
Q Consensus       157 ~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~-V~~~~~~~~~~~~~~~~~g~~~vv~~~~~  235 (357)
                      +++.+.+++.+||.++.....++++++|||+|+|++|++++++|+..|++ |+++++++++.+.+.+ +|++++++.++.
T Consensus       160 ~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~a~~~a~~~G~~~v~~~~~~~~~~~~~~~-~g~~~~v~~~~~  238 (365)
T cd05279         160 KVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQ-LGATECINPRDQ  238 (365)
T ss_pred             HhhHhccchhHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH-hCCCeecccccc
Confidence            99999999999999987777779999999998899999999999999995 6777778888888866 999999887654


Q ss_pred             --hHHH---Hh-hCCccEEEEcCCCCCChHHHHhccc-cCCeEEEEccCC--CCcccchHHHhhccceEEEEeec---CH
Q 018382          236 --TRMQ---EA-ADSLDYIIDTVPANHPLEPYLSLLK-LDGKLILTGVIN--TPMQFLTPMVMLGRKAITGSFIG---SM  303 (357)
Q Consensus       236 --~~~~---~~-~~~~d~v~d~~g~~~~~~~~~~~l~-~~G~~v~~g~~~--~~~~~~~~~~~~~~~~i~g~~~~---~~  303 (357)
                        +..+   +. .+++|++||++|....+..++++++ ++|+++.+|...  ....++...+ .+..++.|++..   ..
T Consensus       239 ~~~~~~~l~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~l~g~~~~~~~~~  317 (365)
T cd05279         239 DKPIVEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPPSGTEATLDPNDL-LTGRTIKGTVFGGWKSK  317 (365)
T ss_pred             cchHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhccCCCEEEEEecCCCCCceeeCHHHH-hcCCeEEEEeccCCchH
Confidence              3322   22 2479999999987547888999999 999999998754  2344555555 567778877543   34


Q ss_pred             HHHHHHHHHHHhcCCCc--cE-EEeecccHHHHHHHHHcCCccEEEEE
Q 018382          304 KETKEMLEFCREKGVTS--MI-EVIKMDYVNKAFERLEKNDVRYRFVV  348 (357)
Q Consensus       304 ~~~~~~~~~~~~~~l~~--~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi  348 (357)
                      +.+..+++++.++.+..  .+ ++|+++++++||+.+++++.. |+++
T Consensus       318 ~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~-~~~~  364 (365)
T cd05279         318 DSVPKLVALYRQKKFPLDELITHVLPFEEINDGFDLMRSGESI-RTIL  364 (365)
T ss_pred             hHHHHHHHHHHcCCcchhHheeeeecHHHHHHHHHHHhCCCce-eeee
Confidence            67888999999998875  34 899999999999999887654 6665

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall

>cd05278 FDH_like Formaldehyde dehydrogenases

Probab=100.00  E-value=4.5e-41  Score=312.18  Aligned_cols=331  Identities=24%  Similarity=0.363  Sum_probs=272.4

Q ss_pred             eeehccCCCCCcceeeeecCCC-CCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCCCC
Q 018382           11 IGWAAKDPSGILSPYTYTLRNT-GAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGD   89 (357)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~p~~-~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd   89 (357)
                      +++.+. +++.+.+.+++.|.| .++||+||+.++++|++|++++.|.++...+|.++|+|++|+|+++|+++++|++||
T Consensus         2 ka~~~~-~~~~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd   80 (347)
T cd05278           2 KALVYL-GPGKIGLEEVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGVPGAKHGMILGHEFVGEVVEVGSDVKRLKPGD   80 (347)
T ss_pred             ceEEEe-cCCceEEEEcCCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCCCCCCceeccceEEEEEEECCCccccCCCC
Confidence            466655 355688889999999 999999999999999999999998876566788999999999999999999999999


Q ss_pred             EEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCc--ceEECCCCCCccccccccchhhh
Q 018382           90 KVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQK--FVVKIPDGMALEQAAPLLCAGVT  167 (357)
Q Consensus        90 ~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~--~~~~lP~~l~~~~aa~~~~~~~t  167 (357)
                      +|++. ....||.|.+|..|..+.|++..+...    .+....|+|++|++++++  +++++|+++++++++.++..+.|
T Consensus        81 ~V~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~g~~~~~~~v~~~~~~~~~lP~~~~~~~aa~l~~~~~t  155 (347)
T cd05278          81 RVSVP-CITFCGRCRFCRRGYHAHCENGLWGWK----LGNRIDGGQAEYVRVPYADMNLAKIPDGLPDEDALMLSDILPT  155 (347)
T ss_pred             EEEec-CCCCCCCChhHhCcCcccCcCCCcccc----cccCCCCeeeEEEEecchhCeEEECCCCCCHHHHhhhcchhhh
Confidence            99765 445799999999999999987553321    223357999999999987  99999999999999999999999


Q ss_pred             hhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHH---hh-
Q 018382          168 VFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQE---AA-  242 (357)
Q Consensus       168 a~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~---~~-  242 (357)
                      ||+++ ....++++++|||.|+|.+|++++|+|+..|. +|+++.+++++.+.+++ +|++++++.+..+....   .. 
T Consensus       156 a~~~~-~~~~~~~~~~VlI~g~g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~~~-~g~~~vi~~~~~~~~~~i~~~~~  233 (347)
T cd05278         156 GFHGA-ELAGIKPGSTVAVIGAGPVGLCAVAGARLLGAARIIAVDSNPERLDLAKE-AGATDIINPKNGDIVEQILELTG  233 (347)
T ss_pred             eeehh-hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH-hCCcEEEcCCcchHHHHHHHHcC
Confidence            99998 55667999999998889999999999999997 88888887777776666 99999998876544332   22 


Q ss_pred             -CCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCccc-chHHHhhccceEEEEeecCHHHHHHHHHHHHhcCCCc
Q 018382          243 -DSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQF-LTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTS  320 (357)
Q Consensus       243 -~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~-~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~  320 (357)
                       +++|++||+++....+..++++++++|+++.+|........ .....+.++.++.++.....+.++++++++.++.+.+
T Consensus       234 ~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  313 (347)
T cd05278         234 GRGVDCVIEAVGFEETFEQAVKVVRPGGTIANVGVYGKPDPLPLLGEWFGKNLTFKTGLVPVRARMPELLDLIEEGKIDP  313 (347)
T ss_pred             CCCCcEEEEccCCHHHHHHHHHHhhcCCEEEEEcCCCCCcccCccchhhhceeEEEeeccCchhHHHHHHHHHHcCCCCh
Confidence             37999999998744788899999999999999865433211 1122345677777766555678899999999999886


Q ss_pred             c--E-EEeecccHHHHHHHHHcCCc-cEEEEEe
Q 018382          321 M--I-EVIKMDYVNKAFERLEKNDV-RYRFVVD  349 (357)
Q Consensus       321 ~--i-~~~~~~~~~~a~~~~~~~~~-~Gkvvi~  349 (357)
                      .  + +.|+++++++|++.+.+++. .+|++++
T Consensus       314 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~vv~  346 (347)
T cd05278         314 SKLITHRFPLDDILKAYRLFDNKPDGCIKVVIR  346 (347)
T ss_pred             hHcEEEEecHHHHHHHHHHHhcCCCCceEEEec
Confidence            2  4 88999999999999988877 7899876

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=7.9e-41  Score=308.44  Aligned_cols=327  Identities=29%  Similarity=0.442  Sum_probs=275.9

Q ss_pred             eeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCCCC
Q 018382           10 TIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGD   89 (357)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd   89 (357)
                      |++++...+++.+.+.++|.|.+.++||+|+++++++|++|++.+.|..+....|.++|+|++|+|+++|++++.|++||
T Consensus         1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd   80 (332)
T cd08259           1 MKAAILHKPNKPLQIEEVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFPRGKYPLILGHEIVGTVEEVGEGVERFKPGD   80 (332)
T ss_pred             CeEEEEecCCCceEEEEccCCCCCCCeEEEEEEEEecchhhhHHhcCCCCCCCCCeeccccceEEEEEECCCCccCCCCC
Confidence            35677654466888889999999999999999999999999999988776556678999999999999999999999999


Q ss_pred             EEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhhhh
Q 018382           90 KVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVF  169 (357)
Q Consensus        90 ~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~  169 (357)
                      +|++.... .|+.|..|..+.++.|++..  ..     |....|++++|++++...++++|+++++++++.+++.+.+||
T Consensus        81 ~V~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~-----~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~  152 (332)
T cd08259          81 RVILYYYI-PCGKCEYCLSGEENLCRNRA--EY-----GEEVDGGFAEYVKVPERSLVKLPDNVSDESAALAACVVGTAV  152 (332)
T ss_pred             EEEECCCC-CCcCChhhhCCCcccCCCcc--cc-----ccccCCeeeeEEEechhheEECCCCCCHHHHhhhccHHHHHH
Confidence            99776554 49999999999999998752  11     234679999999999999999999999999999999999999


Q ss_pred             hhhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhh--CCcc
Q 018382          170 SPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAA--DSLD  246 (357)
Q Consensus       170 ~~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~--~~~d  246 (357)
                      +++.. ..+.+++++||+|+ |.+|++++++++..|++|+++++++++.+.+.+ +|.+++++..+  ..+.+.  .++|
T Consensus       153 ~~l~~-~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~d  228 (332)
T cd08259         153 HALKR-AGVKKGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKILKE-LGADYVIDGSK--FSEDVKKLGGAD  228 (332)
T ss_pred             HHHHH-hCCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHH-cCCcEEEecHH--HHHHHHhccCCC
Confidence            99987 66689999999987 999999999999999999999998888887766 89888776544  222222  2799


Q ss_pred             EEEEcCCCCCChHHHHhccccCCeEEEEccCCCCcc-cchHHHhhccceEEEEeecCHHHHHHHHHHHHhcCCCccE-EE
Q 018382          247 YIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQ-FLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMI-EV  324 (357)
Q Consensus       247 ~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~-~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~~i-~~  324 (357)
                      ++|+++|.. ....++++++++|+++.++....... +.......++.++.++.....+.++.+++++.++.+++.+ ++
T Consensus       229 ~v~~~~g~~-~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  307 (332)
T cd08259         229 VVIELVGSP-TIEESLRSLNKGGRLVLIGNVTPDPAPLRPGLLILKEIRIIGSISATKADVEEALKLVKEGKIKPVIDRV  307 (332)
T ss_pred             EEEECCChH-HHHHHHHHhhcCCEEEEEcCCCCCCcCCCHHHHHhCCcEEEEecCCCHHHHHHHHHHHHcCCCccceeEE
Confidence            999999987 68889999999999999987543322 2333334567777777666678899999999999998767 89


Q ss_pred             eecccHHHHHHHHHcCCccEEEEEe
Q 018382          325 IKMDYVNKAFERLEKNDVRYRFVVD  349 (357)
Q Consensus       325 ~~~~~~~~a~~~~~~~~~~Gkvvi~  349 (357)
                      |+++++++||+.+.+++..||++++
T Consensus       308 ~~~~~~~~a~~~~~~~~~~~kvv~~  332 (332)
T cd08259         308 VSLEDINEALEDLKSGKVVGRIVLK  332 (332)
T ss_pred             EcHHHHHHHHHHHHcCCcccEEEeC
Confidence            9999999999999999988999874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=1.1e-40  Score=307.43  Aligned_cols=324  Identities=31%  Similarity=0.545  Sum_probs=272.8

Q ss_pred             eeeehccCCC----CCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCC
Q 018382           10 TIGWAAKDPS----GILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNF   85 (357)
Q Consensus        10 ~~~~~~~~~~----~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~   85 (357)
                      |++|++.+..    .++.+++.+.|.+.++||+||+.++++|++|++.+.|..+...+|.++|||++|+|+++|+++++|
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~irv~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~   80 (329)
T cd08298           1 MKAMVLEKPGPIEENPLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLPPPKLPLIPGHEIVGRVEAVGPGVTRF   80 (329)
T ss_pred             CeEEEEecCCCCCCCCceEEeccCCCCCCCEEEEEEEEEeccHHHHHHHhCCCCCCCCCccccccccEEEEEECCCCCCC
Confidence            3455554333    267788888888999999999999999999999998877655668899999999999999999999


Q ss_pred             CCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchh
Q 018382           86 KVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAG  165 (357)
Q Consensus        86 ~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~  165 (357)
                      ++||+|++.+...+|+.|..|..+.++.|+...+.       +...+|+|++|+.++.+.++++|+++++.+++.+++.+
T Consensus        81 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~  153 (329)
T cd08298          81 SVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFT-------GYTVDGGYAEYMVADERFAYPIPEDYDDEEAAPLLCAG  153 (329)
T ss_pred             cCCCEEEEeccCCCCCCChhHhCcChhhCCCcccc-------ccccCCceEEEEEecchhEEECCCCCCHHHhhHhhhhh
Confidence            99999987666667999999999999999876544       22357999999999999999999999999999999999


Q ss_pred             hhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCc
Q 018382          166 VTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSL  245 (357)
Q Consensus       166 ~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~  245 (357)
                      .|||+++ ....++++++|||+|+|++|++++++++..|++|+++++++++.+.+++ +|++++++.+..     ..+++
T Consensus       154 ~ta~~~~-~~~~~~~~~~vlV~g~g~vg~~~~~la~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~-----~~~~v  226 (329)
T cd08298         154 IIGYRAL-KLAGLKPGQRLGLYGFGASAHLALQIARYQGAEVFAFTRSGEHQELARE-LGADWAGDSDDL-----PPEPL  226 (329)
T ss_pred             HHHHHHH-HhhCCCCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEcCChHHHHHHHH-hCCcEEeccCcc-----CCCcc
Confidence            9999999 6667799999999999999999999999999999999999998888866 999888776542     12479


Q ss_pred             cEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCc-ccchHHHhhccceEEEEeecCHHHHHHHHHHHHhcCCCccEEE
Q 018382          246 DYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPM-QFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEV  324 (357)
Q Consensus       246 d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~~i~~  324 (357)
                      |+++++.+....+..++++++++|+++.++...... .++.. .+.++..+.++.....+.++.++++++++.+++.+++
T Consensus       227 D~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~l~~~~~~  305 (329)
T cd08298         227 DAAIIFAPVGALVPAALRAVKKGGRVVLAGIHMSDIPAFDYE-LLWGEKTIRSVANLTRQDGEEFLKLAAEIPIKPEVET  305 (329)
T ss_pred             cEEEEcCCcHHHHHHHHHHhhcCCEEEEEcCCCCCCCccchh-hhhCceEEEEecCCCHHHHHHHHHHHHcCCCCceEEE
Confidence            999998766557889999999999999887533221 12222 2456677877777777888999999999998875699


Q ss_pred             eecccHHHHHHHHHcCCccEEEEE
Q 018382          325 IKMDYVNKAFERLEKNDVRYRFVV  348 (357)
Q Consensus       325 ~~~~~~~~a~~~~~~~~~~Gkvvi  348 (357)
                      |+++++++|++.+++++..||+++
T Consensus       306 ~~~~~~~~a~~~~~~~~~~~~~v~  329 (329)
T cd08298         306 YPLEEANEALQDLKEGRIRGAAVL  329 (329)
T ss_pred             EeHHHHHHHHHHHHcCCCcceeeC
Confidence            999999999999999999999874

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

Probab=100.00  E-value=1.2e-40  Score=308.00  Aligned_cols=331  Identities=30%  Similarity=0.467  Sum_probs=282.1

Q ss_pred             eeehccCCCCC-cceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCC-CCCCCCccCccccEEEEEeCCCCCCCCCC
Q 018382           11 IGWAAKDPSGI-LSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLG-MSNYPMVPGHEVVGEVKEVGSEVSNFKVG   88 (357)
Q Consensus        11 ~~~~~~~~~~~-~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~-~~~~p~~lG~e~~G~V~~vG~~v~~~~~G   88 (357)
                      +++.+....++ +...+.+.|.++++||+|++.++++|+.|+....|.++ ...+|.++|+|++|+|+++|++++.|++|
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~g~~~~G~v~~~G~~v~~~~~G   81 (338)
T cd08254           2 KAWRFHKGSKGLLVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVPTLTKLPLTLGHEIAGTVVEVGAGVTNFKVG   81 (338)
T ss_pred             eeEEEecCCCCceEEeccCCCCCCCCeEEEEEEEEeeccHhHHHHcCCCcccCCCCEeccccccEEEEEECCCCccCCCC
Confidence            45555433444 67778899999999999999999999999999988765 34457789999999999999999999999


Q ss_pred             CEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhhh
Q 018382           89 DKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTV  168 (357)
Q Consensus        89 d~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta  168 (357)
                      |+|+..+. .+||+|..|..++.+.|..+.+.       |....|++++|+.++.+.++++|+++++++++.++..+.+|
T Consensus        82 d~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~ta  153 (338)
T cd08254          82 DRVAVPAV-IPCGACALCRRGRGNLCLNQGMP-------GLGIDGGFAEYIVVPARALVPVPDGVPFAQAAVATDAVLTP  153 (338)
T ss_pred             CEEEECCC-CCCCCChhhhCcCcccCCCCCcc-------ccccCCcceeeEEechHHeEECCCCCCHHHhhhhcchHHHH
Confidence            99977665 47999999999999999654432       33467999999999999999999999999999999999999


Q ss_pred             hhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHH---Hhh-CC
Q 018382          169 FSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQ---EAA-DS  244 (357)
Q Consensus       169 ~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~---~~~-~~  244 (357)
                      |.++.....++++++|||+|+|.+|++++++|+..|++|+++++++++.+.+++ +|.+++++..+.....   ... ++
T Consensus       154 ~~~l~~~~~~~~~~~vli~g~g~vG~~~~~la~~~G~~V~~~~~s~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~  232 (338)
T cd08254         154 YHAVVRAGEVKPGETVLVIGLGGLGLNAVQIAKAMGAAVIAVDIKEEKLELAKE-LGADEVLNSLDDSPKDKKAAGLGGG  232 (338)
T ss_pred             HHHHHhccCCCCCCEEEEECCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH-hCCCEEEcCCCcCHHHHHHHhcCCC
Confidence            999988888899999999888999999999999999999999999999888866 9998888776543322   122 37


Q ss_pred             ccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCcccchHHHhhccceEEEEeecCHHHHHHHHHHHHhcCCCccEEE
Q 018382          245 LDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEV  324 (357)
Q Consensus       245 ~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~~i~~  324 (357)
                      +|+++|+++....+..++++++++|+++.++.......++...++.++.++.+++....+.+..++++++++.+.+.+++
T Consensus       233 ~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~l~~~~~~  312 (338)
T cd08254         233 FDVIFDFVGTQPTFEDAQKAVKPGGRIVVVGLGRDKLTVDLSDLIARELRIIGSFGGTPEDLPEVLDLIAKGKLDPQVET  312 (338)
T ss_pred             ceEEEECCCCHHHHHHHHHHhhcCCEEEEECCCCCCCccCHHHHhhCccEEEEeccCCHHHHHHHHHHHHcCCCccccee
Confidence            99999999876578899999999999999987655455566667788889998887777889999999999998876789


Q ss_pred             eecccHHHHHHHHHcCCccEEEEEec
Q 018382          325 IKMDYVNKAFERLEKNDVRYRFVVDV  350 (357)
Q Consensus       325 ~~~~~~~~a~~~~~~~~~~Gkvvi~~  350 (357)
                      +++++++++++.+++++..||+++++
T Consensus       313 ~~~~~~~~a~~~~~~~~~~~kvv~~~  338 (338)
T cd08254         313 RPLDEIPEVLERLHKGKVKGRVVLVP  338 (338)
T ss_pred             EcHHHHHHHHHHHHcCCccceEEEeC
Confidence            99999999999999999999999864

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio

>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.6e-40  Score=307.31  Aligned_cols=328  Identities=27%  Similarity=0.403  Sum_probs=271.0

Q ss_pred             eeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCCCC
Q 018382           10 TIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGD   89 (357)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd   89 (357)
                      |++|... .++.+++.++++|++.++|++||+.++++|+.|+.+..+..+...+|.++|+|++|+|+++|++++.|++||
T Consensus         1 ~~a~~~~-~~~~~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~Gd   79 (337)
T cd08261           1 MKALVCE-KPGRLEVVDIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRNPFASYPRILGHELSGEVVEVGEGVAGLKVGD   79 (337)
T ss_pred             CeEEEEe-CCCceEEEECCCCCCCCCeEEEEEEEEeEcccChHHHcCCCCcCCCCcccccccEEEEEEeCCCCCCCCCCC
Confidence            3555554 346788899999999999999999999999999999988766545677899999999999999999999999


Q ss_pred             EEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhhhh
Q 018382           90 KVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVF  169 (357)
Q Consensus        90 ~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~  169 (357)
                      +|+.. ..+.||.|..|+.+.+|.|......       +....|+|++|+.++++ ++++|+++++++++++ ..+.+++
T Consensus        80 ~V~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~v~v~~~-~~~~p~~~~~~~aa~~-~~~~~a~  149 (337)
T cd08261          80 RVVVD-PYISCGECYACRKGRPNCCENLQVL-------GVHRDGGFAEYIVVPAD-ALLVPEGLSLDQAALV-EPLAIGA  149 (337)
T ss_pred             EEEEC-CCCCCCCChhhhCcCcccCCCCCee-------eecCCCcceeEEEechh-eEECCCCCCHHHhhhh-chHHHHH
Confidence            99664 4457999999999999999532211       11247899999999999 9999999999999877 5677888


Q ss_pred             hhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHH---HhhC--C
Q 018382          170 SPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQ---EAAD--S  244 (357)
Q Consensus       170 ~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~---~~~~--~  244 (357)
                      .++ ....++++++|||+|+|.+|.+++|+|+..|++|+++++++++.+.+++ +|+++++++++.+..+   ....  +
T Consensus       150 ~~~-~~~~l~~g~~vLI~g~g~vG~~a~~lA~~~g~~v~~~~~s~~~~~~~~~-~g~~~v~~~~~~~~~~~l~~~~~~~~  227 (337)
T cd08261         150 HAV-RRAGVTAGDTVLVVGAGPIGLGVIQVAKARGARVIVVDIDDERLEFARE-LGADDTINVGDEDVAARLRELTDGEG  227 (337)
T ss_pred             HHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEECCCHHHHHHHHH-hCCCEEecCcccCHHHHHHHHhCCCC
Confidence            887 5566799999999988999999999999999999999999888888866 9999999887654323   3322  6


Q ss_pred             ccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCcccchHHHhhccceEEEEeecCHHHHHHHHHHHHhcCCCc--cE
Q 018382          245 LDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTS--MI  322 (357)
Q Consensus       245 ~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~--~i  322 (357)
                      +|++||+.|+...+..++++++++|+++.++.......+....+..+++++.+......+.++.++++++++.+++  .+
T Consensus       228 vd~vld~~g~~~~~~~~~~~l~~~G~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~~~~~~  307 (337)
T cd08261         228 ADVVIDATGNPASMEEAVELVAHGGRVVLVGLSKGPVTFPDPEFHKKELTILGSRNATREDFPDVIDLLESGKVDPEALI  307 (337)
T ss_pred             CCEEEECCCCHHHHHHHHHHHhcCCEEEEEcCCCCCCccCHHHHHhCCCEEEEeccCChhhHHHHHHHHHcCCCChhhhe
Confidence            9999999987547888999999999999988665433444445566777887776555568899999999999987  55


Q ss_pred             -EEeecccHHHHHHHHHcC-CccEEEEEec
Q 018382          323 -EVIKMDYVNKAFERLEKN-DVRYRFVVDV  350 (357)
Q Consensus       323 -~~~~~~~~~~a~~~~~~~-~~~Gkvvi~~  350 (357)
                       .+|+++++++|++.++++ ...+|+|+++
T Consensus       308 ~~~~~~~~~~~a~~~~~~~~~~~~k~v~~~  337 (337)
T cd08261         308 THRFPFEDVPEAFDLWEAPPGGVIKVLIEF  337 (337)
T ss_pred             EEEeeHHHHHHHHHHHhcCCCceEEEEEeC
Confidence             899999999999999988 4779999864

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,

>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins

Probab=100.00  E-value=1.7e-40  Score=306.22  Aligned_cols=328  Identities=43%  Similarity=0.717  Sum_probs=279.3

Q ss_pred             eehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCCCCEE
Q 018382           12 GWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKV   91 (357)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V   91 (357)
                      ++...+.++.+.+.+++.|.+.++|++|++.++++|++|+..+.|..+...+|.++|+|++|+|+++|+++.+|++||+|
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~v~~~g~~~~~~~~Gd~V   81 (330)
T cd08245           2 AAVVHAAGGPLEPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWGGSKYPLVPGHEIVGEVVEVGAGVEGRKVGDRV   81 (330)
T ss_pred             eEEEecCCCCceEEeccCCCCCCCeEEEEEEEEeccHHHHHHHcCCCCCCCCCcccCccceEEEEEECCCCcccccCCEE
Confidence            45555555689999999999999999999999999999999998876544567889999999999999999999999999


Q ss_pred             EEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhhhhhh
Q 018382           92 GVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSP  171 (357)
Q Consensus        92 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~  171 (357)
                      ++.+....||.|..|.++..+.|++..+.       +....|++++|+.++.++++++|+++++++++.+++.+.+||.+
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~l~~~~~ta~~~  154 (330)
T cd08245          82 GVGWLVGSCGRCEYCRRGLENLCQKAVNT-------GYTTQGGYAEYMVADAEYTVLLPDGLPLAQAAPLLCAGITVYSA  154 (330)
T ss_pred             EEccccCCCCCChhhhCcCcccCcCcccc-------CcccCCccccEEEEcHHHeEECCCCCCHHHhhhhhhhHHHHHHH
Confidence            87666567999999999999999985432       22247899999999999999999999999999999999999999


Q ss_pred             hhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEc
Q 018382          172 LSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDT  251 (357)
Q Consensus       172 l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~  251 (357)
                      +.. ..++++++|||+|+|.+|++++++|+..|++|+++++++++.+.+.+ +|++.+++...........+++|++|++
T Consensus       155 l~~-~~~~~~~~vlI~g~g~iG~~~~~~a~~~G~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~d~vi~~  232 (330)
T cd08245         155 LRD-AGPRPGERVAVLGIGGLGHLAVQYARAMGFETVAITRSPDKRELARK-LGADEVVDSGAELDEQAAAGGADVILVT  232 (330)
T ss_pred             HHh-hCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-hCCcEEeccCCcchHHhccCCCCEEEEC
Confidence            877 45699999999988889999999999999999999999999888866 9998888766544333333579999999


Q ss_pred             CCCCCChHHHHhccccCCeEEEEccCCCC-cccchHHHhhccceEEEEeecCHHHHHHHHHHHHhcCCCccEEEeecccH
Q 018382          252 VPANHPLEPYLSLLKLDGKLILTGVINTP-MQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEVIKMDYV  330 (357)
Q Consensus       252 ~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~  330 (357)
                      ++.......++++++++|+++.++..... ..+....++.++.++.++.....+.++.+++++.++.+.+.++.|+++++
T Consensus       233 ~~~~~~~~~~~~~l~~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~l~~~~~~~~~~~~  312 (330)
T cd08245         233 VVSGAAAEAALGGLRRGGRIVLVGLPESPPFSPDIFPLIMKRQSIAGSTHGGRADLQEALDFAAEGKVKPMIETFPLDQA  312 (330)
T ss_pred             CCcHHHHHHHHHhcccCCEEEEECCCCCCccccchHHHHhCCCEEEEeccCCHHHHHHHHHHHHcCCCcceEEEEcHHHH
Confidence            88655788999999999999999865433 22224456678888988888777889999999999999876689999999


Q ss_pred             HHHHHHHHcCCccEEEEE
Q 018382          331 NKAFERLEKNDVRYRFVV  348 (357)
Q Consensus       331 ~~a~~~~~~~~~~Gkvvi  348 (357)
                      ++|++.+++++..||+++
T Consensus       313 ~~a~~~~~~~~~~~~~v~  330 (330)
T cd08245         313 NEAYERMEKGDVRFRFVL  330 (330)
T ss_pred             HHHHHHHHcCCCCcceeC
Confidence            999999999999999875

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an

>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.3e-40  Score=311.31  Aligned_cols=337  Identities=26%  Similarity=0.460  Sum_probs=277.6

Q ss_pred             eeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCC---CC
Q 018382           10 TIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSN---FK   86 (357)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~---~~   86 (357)
                      |++|++...+.++++.++++|.+.++||+||+.++++|++|+++..+.++. .+|.++|||++|+|+.+|+++++   |+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~-~~p~~~g~e~~G~v~~vG~~~~~~~~~~   79 (367)
T cd08263           1 MKAAVLKGPNPPLTIEEIPVPRPKEGEILIRVAACGVCHSDLHVLKGELPF-PPPFVLGHEISGEVVEVGPNVENPYGLS   79 (367)
T ss_pred             CeeEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEeeeCcchHHHhcCCCCC-CCCcccccccceEEEEeCCCCCCCCcCC
Confidence            457777655566888999999999999999999999999999998887653 56789999999999999999988   99


Q ss_pred             CCCEEEEccccCCCCCCcccccCcccccccccccCc-c-ccCCC-------------CCCCCccceEEEeeCcceEECCC
Q 018382           87 VGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYN-D-VYTDG-------------KPTQGGFAESMVVDQKFVVKIPD  151 (357)
Q Consensus        87 ~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~-~~~~~-------------~~~~G~~~~~~~v~~~~~~~lP~  151 (357)
                      +||+|++.+.. .||.|..|..+.+++|+++.++.. + ..+.|             ....|++++|+.++.+.++++|+
T Consensus        80 ~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~  158 (367)
T cd08263          80 VGDRVVGSFIM-PCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVYMYSMGGLAEYAVVPATALAPLPE  158 (367)
T ss_pred             CCCEEEEcCCC-CCCCChHHhCcCcccCcCccccccccccccCCcccccccCCCccccccCCcceeEEEechhhEEECCC
Confidence            99999765444 699999999999999997642100 0 00000             12468999999999999999999


Q ss_pred             CCCccccccccchhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCe-EEEEeCCcHHHHHHHHhcCCcEEE
Q 018382          152 GMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHH-VTVISSSDKKRVEAMEHLGADQYL  230 (357)
Q Consensus       152 ~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~-V~~~~~~~~~~~~~~~~~g~~~vv  230 (357)
                      ++++++++.++..+.|||.++.+...+.++++|||+|+|++|++++++|+..|++ |+++++++++.+.+++ +|+++++
T Consensus       159 ~is~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g~g~vG~~~~~lak~~G~~~vi~~~~s~~~~~~~~~-~g~~~v~  237 (367)
T cd08263         159 SLDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIGVGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAKE-LGATHTV  237 (367)
T ss_pred             CCCHHHHhHhcchHHHHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH-hCCceEe
Confidence            9999999999999999999998888878999999998899999999999999997 8888888888887766 9999999


Q ss_pred             cCCChhHHHH---hh--CCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCC--CcccchHHHhhccceEEEEeecC-
Q 018382          231 VSSDATRMQE---AA--DSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINT--PMQFLTPMVMLGRKAITGSFIGS-  302 (357)
Q Consensus       231 ~~~~~~~~~~---~~--~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~~~i~g~~~~~-  302 (357)
                      +.+..+..++   ..  .++|++||++++......++++++++|+++.++....  ...+....++.++.++.++.... 
T Consensus       238 ~~~~~~~~~~l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  317 (367)
T cd08263         238 NAAKEDAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDGGRAVVVGLAPGGATAEIPITRLVRRGIKIIGSYGARP  317 (367)
T ss_pred             cCCcccHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcCCEEEEEccCCCCCccccCHHHHhhCCeEEEecCCCCc
Confidence            8876544332   22  3699999999985467889999999999999986543  23344455556888887765433 


Q ss_pred             HHHHHHHHHHHHhcCCCcc--E-EEeecccHHHHHHHHHcCCccEEEEEe
Q 018382          303 MKETKEMLEFCREKGVTSM--I-EVIKMDYVNKAFERLEKNDVRYRFVVD  349 (357)
Q Consensus       303 ~~~~~~~~~~~~~~~l~~~--i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~  349 (357)
                      .+.++.++++++++.+++.  + ++|+++++.+|++.+++++..||+|++
T Consensus       318 ~~~~~~~~~ll~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~~~~  367 (367)
T cd08263         318 RQDLPELVGLAASGKLDPEALVTHKYKLEEINEAYENLRKGLIHGRAIVE  367 (367)
T ss_pred             HHHHHHHHHHHHcCCCCcccceeEEecHHHHHHHHHHHhcCCccceeeeC
Confidence            3678899999999998863  5 889999999999999999988999874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu

>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH)

Probab=100.00  E-value=3.9e-40  Score=308.80  Aligned_cols=333  Identities=23%  Similarity=0.290  Sum_probs=268.1

Q ss_pred             eeehccCCCCCcceeeeecCCC-CCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCCCC
Q 018382           11 IGWAAKDPSGILSPYTYTLRNT-GAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGD   89 (357)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~p~~-~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd   89 (357)
                      ++|++. ++++++++++|+|++ .++||+||++++++|++|++.+.|..+ ..+|.++|||++|+|+++|++++.|++||
T Consensus         2 ~~~~~~-~~~~~~~~~~~~p~~~~~~evlv~v~a~~i~~~D~~~~~g~~~-~~~p~~~g~e~~G~V~~vG~~v~~~~~Gd   79 (375)
T cd08282           2 KAVVYG-GPGNVAVEDVPDPKIEHPTDAIVRITTTAICGSDLHMYRGRTG-AEPGLVLGHEAMGEVEEVGSAVESLKVGD   79 (375)
T ss_pred             ceEEEe-cCCceeEEeCCCCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCC-CCCCceeccccEEEEEEeCCCCCcCCCCC
Confidence            466654 466899999999996 899999999999999999999988765 34688999999999999999999999999


Q ss_pred             EEEEccccCCCCCCcccccCcccccccccccCccc---cCCCCCCCCccceEEEeeCc--ceEECCCCCCcc---ccccc
Q 018382           90 KVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDV---YTDGKPTQGGFAESMVVDQK--FVVKIPDGMALE---QAAPL  161 (357)
Q Consensus        90 ~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~G~~~~~~~v~~~--~~~~lP~~l~~~---~aa~~  161 (357)
                      +|++.+ ..+||.|..|..+..+.|.+..+.+.+.   +..+....|+|++|++++.+  .++++|++++++   +++++
T Consensus        80 ~V~~~~-~~~~g~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~~lP~~~~~~~~~~~a~~  158 (375)
T cd08282          80 RVVVPF-NVACGRCRNCKRGLTGVCLTVNPGRAGGAYGYVDMGPYGGGQAEYLRVPYADFNLLKLPDRDGAKEKDDYLML  158 (375)
T ss_pred             EEEEeC-CCCCCCCHHHHCcCcccCCCCCcccccccccccccCCCCCeeeeEEEeecccCcEEECCCCCChhhhhheeee
Confidence            996654 4459999999999999998743322111   11112346999999999976  899999999998   57888


Q ss_pred             cchhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHH
Q 018382          162 LCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQE  240 (357)
Q Consensus       162 ~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~  240 (357)
                      +..+.+||.++ ....+++|++|+|.|+|++|++++|+|+..|+ +|+++++++++.+.+++ +|++ .++.++.+..+.
T Consensus       159 ~~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vg~~~~~~a~~~G~~~vi~~~~~~~~~~~~~~-~g~~-~v~~~~~~~~~~  235 (375)
T cd08282         159 SDIFPTGWHGL-ELAGVQPGDTVAVFGAGPVGLMAAYSAILRGASRVYVVDHVPERLDLAES-IGAI-PIDFSDGDPVEQ  235 (375)
T ss_pred             cchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-cCCe-EeccCcccHHHH
Confidence            88999999998 55566899999998889999999999999998 79998888888877776 9984 566665443333


Q ss_pred             ---hh-CCccEEEEcCCCCC-----------ChHHHHhccccCCeEEEEccCCCC-------------cccchHHHhhcc
Q 018382          241 ---AA-DSLDYIIDTVPANH-----------PLEPYLSLLKLDGKLILTGVINTP-------------MQFLTPMVMLGR  292 (357)
Q Consensus       241 ---~~-~~~d~v~d~~g~~~-----------~~~~~~~~l~~~G~~v~~g~~~~~-------------~~~~~~~~~~~~  292 (357)
                         +. +++|++|||+|...           .+..++++++++|+++.+|.....             ..++...++.++
T Consensus       236 i~~~~~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (375)
T cd08282         236 ILGLEPGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPGGGIGIVGVYVAEDPGAGDAAAKQGELSFDFGLLWAKG  315 (375)
T ss_pred             HHHhhCCCCCEEEECCCCcccccccccchHHHHHHHHHHhhcCcEEEEEeccCCcccccccccccCccccccHHHHHhcC
Confidence               22 37999999999762           278899999999999887754311             223445566677


Q ss_pred             ceEEEEeecCHHHHHHHHHHHHhcCCCc--cE-EEeecccHHHHHHHHHcCCccEEEEEec
Q 018382          293 KAITGSFIGSMKETKEMLEFCREKGVTS--MI-EVIKMDYVNKAFERLEKNDVRYRFVVDV  350 (357)
Q Consensus       293 ~~i~g~~~~~~~~~~~~~~~~~~~~l~~--~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~  350 (357)
                      ..+.+......+.+..+++++.++.+++  .+ ++|+++++++|++.+.+++ .+|+++++
T Consensus       316 ~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~-~~kvvv~~  375 (375)
T cd08282         316 LSFGTGQAPVKKYNRQLRDLILAGRAKPSFVVSHVISLEDAPEAYARFDKRL-ETKVVIKP  375 (375)
T ss_pred             cEEEEecCCchhhHHHHHHHHHcCCCChHHcEEEEeeHHHHHHHHHHHhcCC-ceEEEeCC
Confidence            7777776656677889999999999986  25 9999999999999999988 89999853

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo

>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=2.5e-40  Score=307.57  Aligned_cols=328  Identities=21%  Similarity=0.306  Sum_probs=264.1

Q ss_pred             eeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCC---------CCCCCCccCccccEEEEEeCC
Q 018382           10 TIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLG---------MSNYPMVPGHEVVGEVKEVGS   80 (357)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~---------~~~~p~~lG~e~~G~V~~vG~   80 (357)
                      |++++.. +++.+++++++.|++.++||+||+.++++|+.|++.+.|...         ..++|.++|+|++|+|+++|+
T Consensus         1 mka~~~~-~~~~~~~~~~~~p~~~~~~v~V~v~a~~i~~~d~~~~~g~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~   79 (350)
T cd08256           1 MRAVVCH-GPQDYRLEEVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGRVVELGE   79 (350)
T ss_pred             CeeEEEe-cCCceEEEECCCCCCCCCeEEEEEEEEEEcccchhhhcCCCccccccccCccCCCCcccCcceeEEEEEeCC
Confidence            3566665 466799999999999999999999999999999998887531         114577899999999999999


Q ss_pred             CCC--CCCCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCc-ceEECCCCCCccc
Q 018382           81 EVS--NFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQK-FVVKIPDGMALEQ  157 (357)
Q Consensus        81 ~v~--~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~-~~~~lP~~l~~~~  157 (357)
                      +++  +|++||+|++. ....|+.|..|..|.++.|....+  .+..   ....|+|++|+.++++ .++++|+++++++
T Consensus        80 ~v~~~~~~~Gd~V~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~g~~---~~~~g~~~~~~~~~~~~~~~~lP~~~~~~~  153 (350)
T cd08256          80 GAEERGVKVGDRVISE-QIVPCWNCRFCNRGQYWMCQKHDL--YGFQ---NNVNGGMAEYMRFPKEAIVHKVPDDIPPED  153 (350)
T ss_pred             CcccCCCCCCCEEEEC-CcCCCCCChHHhCcCcccCcCccc--eeec---cCCCCcceeeEEcccccceEECCCCCCHHH
Confidence            999  89999999654 566799999999999999975432  1110   1257999999999988 6789999999999


Q ss_pred             cccccchhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCe-EEEEeCCcHHHHHHHHhcCCcEEEcCCChh
Q 018382          158 AAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHH-VTVISSSDKKRVEAMEHLGADQYLVSSDAT  236 (357)
Q Consensus       158 aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~-V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~  236 (357)
                      ++.+ ..+.++|.++ ....++++++|+|.|+|.+|++++++|+.+|++ ++++++++++.+.+.+ +|++++++.+..+
T Consensus       154 aa~~-~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~-~g~~~v~~~~~~~  230 (350)
T cd08256         154 AILI-EPLACALHAV-DRANIKFDDVVVLAGAGPLGLGMIGAARLKNPKKLIVLDLKDERLALARK-FGADVVLNPPEVD  230 (350)
T ss_pred             Hhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHHHH-cCCcEEecCCCcC
Confidence            9988 8889999998 555669999999977799999999999999985 6667777777766666 9999998876543


Q ss_pred             H---HHHhhC--CccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCcccchHHH-hhccceEEEEeecCHHHHHHHH
Q 018382          237 R---MQEAAD--SLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMV-MLGRKAITGSFIGSMKETKEML  310 (357)
Q Consensus       237 ~---~~~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~~~~~~~  310 (357)
                      .   +.....  ++|++||++|....+..++++++++|+++.+|.......+....+ ..++.++.++.... ..+.+++
T Consensus       231 ~~~~~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~  309 (350)
T cd08256         231 VVEKIKELTGGYGCDIYIEATGHPSAVEQGLNMIRKLGRFVEFSVFGDPVTVDWSIIGDRKELDVLGSHLGP-YCYPIAI  309 (350)
T ss_pred             HHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEccCCCCCccChhHhhcccccEEEEeccCc-hhHHHHH
Confidence            3   333333  699999999965467889999999999999986544333333332 35677787776543 4688899


Q ss_pred             HHHHhcCCCcc--E-EEeecccHHHHHHHHHcCCccEEEEE
Q 018382          311 EFCREKGVTSM--I-EVIKMDYVNKAFERLEKNDVRYRFVV  348 (357)
Q Consensus       311 ~~~~~~~l~~~--i-~~~~~~~~~~a~~~~~~~~~~Gkvvi  348 (357)
                      +++.++.+++.  + ++|+++++++|++.+++++..+|+++
T Consensus       310 ~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~kvv~  350 (350)
T cd08256         310 DLIASGRLPTDGIVTHQFPLEDFEEAFELMARGDDSIKVVL  350 (350)
T ss_pred             HHHHcCCCChhHheEEEeEHHHHHHHHHHHHhCCCceEEeC
Confidence            99999999872  5 89999999999999999988899874

This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,

>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like

Probab=100.00  E-value=4.6e-40  Score=305.22  Aligned_cols=331  Identities=24%  Similarity=0.362  Sum_probs=272.0

Q ss_pred             eeeehccCCCCCcceeeeecCCC-CCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCCC
Q 018382           10 TIGWAAKDPSGILSPYTYTLRNT-GAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVG   88 (357)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~p~~-~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~G   88 (357)
                      |+++++. +++.+++++++.|+| .++||+||++++++|++|+..+.|.++...+|.++|||++|+|+++|++++++++|
T Consensus         1 m~a~~~~-~~~~~~~~~~~~p~~~~~~ev~v~v~a~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~G   79 (345)
T cd08286           1 MKALVYH-GPGKISWEDRPKPTIQEPTDAIVKMLKTTICGTDLHILKGDVPTVTPGRILGHEGVGVVEEVGSAVTNFKVG   79 (345)
T ss_pred             CceEEEe-cCCceeEEecCCCCCCCCCeEEEEEEEeeecchhhHHHcCCCCCCCCCceecccceEEEEEeccCccccCCC
Confidence            3456655 355688999999996 89999999999999999999999876655557899999999999999999999999


Q ss_pred             CEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCc--ceEECCCCCCccccccccchhh
Q 018382           89 DKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQK--FVVKIPDGMALEQAAPLLCAGV  166 (357)
Q Consensus        89 d~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~--~~~~lP~~l~~~~aa~~~~~~~  166 (357)
                      |+|++.+.. +|+.|..|..+..+.|....+..      |...+|++++|+.++.+  .++++|++++.++++.++..++
T Consensus        80 d~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~~~~~~v~~~~~~~~~lp~~~~~~~aa~l~~~~~  152 (345)
T cd08286          80 DRVLISCIS-SCGTCGYCRKGLYSHCESGGWIL------GNLIDGTQAEYVRIPHADNSLYKLPEGVDEEAAVMLSDILP  152 (345)
T ss_pred             CEEEECCcC-CCCCChHHHCcCcccCCCccccc------ccccCCeeeeEEEcccccCceEECCCCCCHHHhhhccchhH
Confidence            999665444 69999999999999998765531      22357999999999987  8999999999999999999999


Q ss_pred             hhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcC-CeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHH---Hhh
Q 018382          167 TVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMG-HHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQ---EAA  242 (357)
Q Consensus       167 ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g-~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~---~~~  242 (357)
                      +||.++.....++++++|||.|+|++|.+++|+|+..| .+|+++.+++++...+++ +|++++++.+..+..+   ...
T Consensus       153 ta~~~~~~~~~~~~g~~vlI~g~g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~-~g~~~~v~~~~~~~~~~i~~~~  231 (345)
T cd08286         153 TGYECGVLNGKVKPGDTVAIVGAGPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKK-LGATHTVNSAKGDAIEQVLELT  231 (345)
T ss_pred             HHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH-hCCCceeccccccHHHHHHHHh
Confidence            99998766667799999999988999999999999999 689998887777776666 9999999877543322   222


Q ss_pred             --CCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCcccchHHHhhccceEEEEeecCHHHHHHHHHHHHhcCCCc
Q 018382          243 --DSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTS  320 (357)
Q Consensus       243 --~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~  320 (357)
                        .++|++||+++....+..+++.++++|+++.+|.......++...++.++.++.+.... .+.++.++++++++.+++
T Consensus       232 ~~~~~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~  310 (345)
T cd08286         232 DGRGVDVVIEAVGIPATFELCQELVAPGGHIANVGVHGKPVDLHLEKLWIKNITITTGLVD-TNTTPMLLKLVSSGKLDP  310 (345)
T ss_pred             CCCCCCEEEECCCCHHHHHHHHHhccCCcEEEEecccCCCCCcCHHHHhhcCcEEEeecCc-hhhHHHHHHHHHcCCCCh
Confidence              27999999998754678888999999999999875444445555667788888876543 356888999999998875


Q ss_pred             --cE-EEeecccHHHHHHHHHcCCc--cEEEEEec
Q 018382          321 --MI-EVIKMDYVNKAFERLEKNDV--RYRFVVDV  350 (357)
Q Consensus       321 --~i-~~~~~~~~~~a~~~~~~~~~--~Gkvvi~~  350 (357)
                        .+ ++|+++++++|++.+++...  ..|++|++
T Consensus       311 ~~~~~~~~~l~~~~~a~~~~~~~~~~~~~k~~~~~  345 (345)
T cd08286         311 SKLVTHRFKLSEIEKAYDTFSAAAKHKALKVIIDF  345 (345)
T ss_pred             HHcEEeEeeHHHHHHHHHHHhccCCCCeeEEEEeC
Confidence              25 89999999999999987643  35888864

This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (

>PRK05396 tdh L-threonine 3-dehydrogenase; Validated

Probab=100.00  E-value=2.9e-40  Score=306.05  Aligned_cols=329  Identities=26%  Similarity=0.344  Sum_probs=263.3

Q ss_pred             eeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCC---CCCCCCCccCccccEEEEEeCCCCCCCC
Q 018382           10 TIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDL---GMSNYPMVPGHEVVGEVKEVGSEVSNFK   86 (357)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~---~~~~~p~~lG~e~~G~V~~vG~~v~~~~   86 (357)
                      |++|.+.++++.+++.++|.|+|+++||+||++++++|++|++++.+..   +...+|.++|||++|+|+++|++++.|+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~v~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~   80 (341)
T PRK05396          1 MKALVKLKAEPGLWLTDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEVTGFK   80 (341)
T ss_pred             CceEEEecCCCceEEEECCCCCCCCCeEEEEEEEEEEcccchHhhcCCCcccccCCCCcccceeeEEEEEEeCCCCCcCC
Confidence            3567666566779999999999999999999999999999999876632   2234677899999999999999999999


Q ss_pred             CCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhh
Q 018382           87 VGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGV  166 (357)
Q Consensus        87 ~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~  166 (357)
                      +||+|+..+.. .|+.|..|..+++++|+....  .     +...+|+|++|+.++.+.++++|+++++++++.+ ..+.
T Consensus        81 ~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~-----~~~~~g~~~~~~~v~~~~~~~iP~~l~~~~~~~~-~~~~  151 (341)
T PRK05396         81 VGDRVSGEGHI-VCGHCRNCRAGRRHLCRNTKG--V-----GVNRPGAFAEYLVIPAFNVWKIPDDIPDDLAAIF-DPFG  151 (341)
T ss_pred             CCCEEEECCCC-CCCCChhhhCcChhhCCCcce--e-----eecCCCcceeeEEechHHeEECcCCCCHHHhHhh-hHHH
Confidence            99999776555 689999999999999986421  1     2336799999999999999999999999988744 4555


Q ss_pred             hhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCcEEEcCCChhH---HHHhh
Q 018382          167 TVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGADQYLVSSDATR---MQEAA  242 (357)
Q Consensus       167 ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~---~~~~~  242 (357)
                      +++.++.. . ..+|++|+|.|+|++|++++|+|+..|+ +|+++.+++++.+.+.+ +|+++++++++.+.   +..+.
T Consensus       152 ~~~~~~~~-~-~~~g~~vlV~~~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~-lg~~~~~~~~~~~~~~~~~~~~  228 (341)
T PRK05396        152 NAVHTALS-F-DLVGEDVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYRLELARK-MGATRAVNVAKEDLRDVMAELG  228 (341)
T ss_pred             HHHHHHHc-C-CCCCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH-hCCcEEecCccccHHHHHHHhc
Confidence            55555433 2 2689999999889999999999999999 68888878888777776 99999998876443   33333


Q ss_pred             --CCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCcccchHHHhhccceEEEEeecC-HHHHHHHHHHHHhc-CC
Q 018382          243 --DSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGS-MKETKEMLEFCREK-GV  318 (357)
Q Consensus       243 --~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~-~~~~~~~~~~~~~~-~l  318 (357)
                        +++|++|||.|....+..++++++++|+++.+|.......+....++.++.++.++.... .+.+..+++++.++ .+
T Consensus       229 ~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  308 (341)
T PRK05396        229 MTEGFDVGLEMSGAPSAFRQMLDNMNHGGRIAMLGIPPGDMAIDWNKVIFKGLTIKGIYGREMFETWYKMSALLQSGLDL  308 (341)
T ss_pred             CCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCCcccHHHHhhcceEEEEEEccCccchHHHHHHHHHcCCCh
Confidence              379999999987657888999999999999998765444444556677888888765322 23456778888888 45


Q ss_pred             CccE-EEeecccHHHHHHHHHcCCccEEEEEecC
Q 018382          319 TSMI-EVIKMDYVNKAFERLEKNDVRYRFVVDVA  351 (357)
Q Consensus       319 ~~~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~~  351 (357)
                      .+.+ ++|+++++++|++.+++++ .||++++.+
T Consensus       309 ~~~~~~~~~l~~~~~a~~~~~~~~-~gk~vv~~~  341 (341)
T PRK05396        309 SPIITHRFPIDDFQKGFEAMRSGQ-SGKVILDWD  341 (341)
T ss_pred             hHheEEEEeHHHHHHHHHHHhcCC-CceEEEecC
Confidence            4555 8999999999999999887 799998753

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=100.00  E-value=2.6e-40  Score=305.93  Aligned_cols=302  Identities=23%  Similarity=0.222  Sum_probs=246.0

Q ss_pred             eeeehccCCC-CCcceeeeec----CCCCCCcEEEEEeeeccccchHHHHhcCCCC-CCCCCccCccc--cEEEEEeCCC
Q 018382           10 TIGWAAKDPS-GILSPYTYTL----RNTGAEDVYIKVLYCGICHTDIHQIKNDLGM-SNYPMVPGHEV--VGEVKEVGSE   81 (357)
Q Consensus        10 ~~~~~~~~~~-~~~~~~~~~~----p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~-~~~p~~lG~e~--~G~V~~vG~~   81 (357)
                      .++|...+++ ..|++++.++    |+|+++||||||+++++||.|++...|..+. ..+|.++|+++  .|++..+|+.
T Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~vlv~v~~~~inp~d~~~~~g~~~~~~~~p~~~g~~~~g~~~~~~v~~~   87 (338)
T cd08295           8 LKAYVTGFPKESDLELRTTKLTLKVPPGGSGDVLVKNLYLSCDPYMRGRMKGHDDSLYLPPFKPGEVITGYGVAKVVDSG   87 (338)
T ss_pred             EecCCCCCCCccceEEEEecCCcCCCCCCCCeEEEEEEEEeeCHHHHHhhccCCccccCCCcCCCCeEeccEEEEEEecC
Confidence            4566653333 4688888877    8899999999999999999999998885432 35577888754  5666668899


Q ss_pred             CCCCCCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeC-cceEECC-CCCCcc-cc
Q 018382           82 VSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQ-KFVVKIP-DGMALE-QA  158 (357)
Q Consensus        82 v~~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~-~~~~~lP-~~l~~~-~a  158 (357)
                      +++|++||+|+.                                      .|+|+||+++++ ..++++| ++++++ ++
T Consensus        88 v~~~~vGd~V~~--------------------------------------~g~~aey~~v~~~~~~~~lp~~~~~~~~~a  129 (338)
T cd08295          88 NPDFKVGDLVWG--------------------------------------FTGWEEYSLIPRGQDLRKIDHTDVPLSYYL  129 (338)
T ss_pred             CCCCCCCCEEEe--------------------------------------cCCceeEEEecchhceeecCCCCCCHHHHH
Confidence            999999999952                                      368999999999 8999995 678887 79


Q ss_pred             ccccchhhhhhhhhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCCh-h
Q 018382          159 APLLCAGVTVFSPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDA-T  236 (357)
Q Consensus       159 a~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~-~  236 (357)
                      +++++++.|||+++.....+++|++|||+|+ |++|++++|+|+..|++|+++++++++.+.+++.+|+++++++++. +
T Consensus       130 a~l~~~~~tA~~~l~~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~  209 (338)
T cd08295         130 GLLGMPGLTAYAGFYEVCKPKKGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLGFDDAFNYKEEPD  209 (338)
T ss_pred             HhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCceeEEcCCccc
Confidence            9999999999999988777799999999987 9999999999999999999999998888888766999999986542 3


Q ss_pred             H---HHHhh-CCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCc------ccchHHHhhccceEEEEeecCH---
Q 018382          237 R---MQEAA-DSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPM------QFLTPMVMLGRKAITGSFIGSM---  303 (357)
Q Consensus       237 ~---~~~~~-~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~------~~~~~~~~~~~~~i~g~~~~~~---  303 (357)
                      .   +.+.. +++|++||++|+. .+..++++++++|+++.+|......      ..+...++.++.++.++.....   
T Consensus       210 ~~~~i~~~~~~gvd~v~d~~g~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~  288 (338)
T cd08295         210 LDAALKRYFPNGIDIYFDNVGGK-MLDAVLLNMNLHGRIAACGMISQYNLEWPEGVRNLLNIIYKRVKIQGFLVGDYLHR  288 (338)
T ss_pred             HHHHHHHhCCCCcEEEEECCCHH-HHHHHHHHhccCcEEEEecccccCCCCCCCCccCHHHHhhccceeeEEEehhhHHH
Confidence            3   22322 3899999999986 8899999999999999998654321      1233456677788888655332   


Q ss_pred             --HHHHHHHHHHHhcCCCccE-EEeecccHHHHHHHHHcCCccEEEEEec
Q 018382          304 --KETKEMLEFCREKGVTSMI-EVIKMDYVNKAFERLEKNDVRYRFVVDV  350 (357)
Q Consensus       304 --~~~~~~~~~~~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~  350 (357)
                        +.++++++++.++.+++.+ ..|+++++++|++.+++++..||+++++
T Consensus       289 ~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~GkvVl~~  338 (338)
T cd08295         289 YPEFLEEMSGYIKEGKLKYVEDIADGLESAPEAFVGLFTGSNIGKQVVKV  338 (338)
T ss_pred             HHHHHHHHHHHHHCCCeEceeecccCHHHHHHHHHHHhcCCCCceEEEEC
Confidence              3467889999999998866 7899999999999999999999999874

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase

Probab=100.00  E-value=9.6e-40  Score=302.83  Aligned_cols=326  Identities=25%  Similarity=0.380  Sum_probs=272.9

Q ss_pred             eeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCCCCE
Q 018382           11 IGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGDK   90 (357)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~   90 (357)
                      ++|.+. ..+.+.+++.++|++.+++|+||++++++|+.|+.++.|.++....|.++|+|++|+|+++|++++.|++||+
T Consensus         2 ~~~~~~-~~~~~~~~~~~~~~l~~~~v~i~v~~~~l~~~d~~~~~g~~~~~~~~~~~g~~~~G~V~~~G~~v~~~~~Gd~   80 (343)
T cd08235           2 KAAVLH-GPNDVRLEEVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHTDLKPPRILGHEIAGEIVEVGDGVTGFKVGDR   80 (343)
T ss_pred             eEEEEe-cCCceEEEEccCCCCCCCeEEEEEEEeeeccccHHHHcCCCccCCCCcccccceEEEEEeeCCCCCCCCCCCE
Confidence            566654 4567888999999999999999999999999999998886643345778999999999999999999999999


Q ss_pred             EEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcc-----eEECCCCCCccccccccchh
Q 018382           91 VGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKF-----VVKIPDGMALEQAAPLLCAG  165 (357)
Q Consensus        91 V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~-----~~~lP~~l~~~~aa~~~~~~  165 (357)
                      |++.+ ...|+.|..|..+..+.|+...+.       |....|+|++|+.++.+.     ++++|+++++++++.+ ..+
T Consensus        81 V~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~v~v~~~~~~~~~~~~lP~~~~~~~aa~~-~~~  151 (343)
T cd08235          81 VFVAP-HVPCGECHYCLRGNENMCPNYKKF-------GNLYDGGFAEYVRVPAWAVKRGGVLKLPDNVSFEEAALV-EPL  151 (343)
T ss_pred             EEEcc-CCCCCCChHHHCcCcccCCCccee-------ccCCCCcceeeEEecccccccccEEECCCCCCHHHHHhh-hHH
Confidence            97764 445889999999999999876433       234679999999999998     9999999999999866 788


Q ss_pred             hhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCe-EEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHH---h
Q 018382          166 VTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHH-VTVISSSDKKRVEAMEHLGADQYLVSSDATRMQE---A  241 (357)
Q Consensus       166 ~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~-V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~---~  241 (357)
                      .+||+++... .++++++|||+|+|.+|++++|+|+..|++ |+++++++++.+.+.+ +|.++++++++.+....   .
T Consensus       152 ~~a~~~l~~~-~~~~g~~VlV~g~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~~-~g~~~~~~~~~~~~~~~i~~~  229 (343)
T cd08235         152 ACCINAQRKA-GIKPGDTVLVIGAGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKK-LGADYTIDAAEEDLVEKVREL  229 (343)
T ss_pred             HHHHHHHHhc-CCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHH-hCCcEEecCCccCHHHHHHHH
Confidence            9999998766 679999999998899999999999999998 8888888888888866 99999998877554333   3


Q ss_pred             hC--CccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCC--cccchHHHhhccceEEEEeecCHHHHHHHHHHHHhcC
Q 018382          242 AD--SLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTP--MQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKG  317 (357)
Q Consensus       242 ~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~  317 (357)
                      ..  ++|++||+++....+..++++++++|+++.++.....  ..+....+..++.++.++.....+.++.+++++.++.
T Consensus       230 ~~~~~vd~vld~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~  309 (343)
T cd08235         230 TDGRGADVVIVATGSPEAQAQALELVRKGGRILFFGGLPKGSTVNIDPNLIHYREITITGSYAASPEDYKEALELIASGK  309 (343)
T ss_pred             hCCcCCCEEEECCCChHHHHHHHHHhhcCCEEEEEeccCCCCCcccCHHHHhhCceEEEEEecCChhhHHHHHHHHHcCC
Confidence            32  6999999999754778899999999999998865432  2334455667888888887777788899999999999


Q ss_pred             CCc--cE-EEeecccHHHHHHHHHcCCccEEEEEe
Q 018382          318 VTS--MI-EVIKMDYVNKAFERLEKNDVRYRFVVD  349 (357)
Q Consensus       318 l~~--~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~  349 (357)
                      +.+  .+ .+|+++++++|++.+.+++ .||+|+.
T Consensus       310 l~~~~~~~~~~~~~~~~~a~~~~~~~~-~~k~vi~  343 (343)
T cd08235         310 IDVKDLITHRFPLEDIEEAFELAADGK-SLKIVIT  343 (343)
T ss_pred             CChHHheeeEeeHHHHHHHHHHHhCCC-cEEEEeC
Confidence            873  34 8899999999999999999 8999874

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i

>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=5.5e-40  Score=302.20  Aligned_cols=318  Identities=26%  Similarity=0.357  Sum_probs=262.6

Q ss_pred             eeehccCC-CCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCCCC
Q 018382           11 IGWAAKDP-SGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGD   89 (357)
Q Consensus        11 ~~~~~~~~-~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd   89 (357)
                      ++++...+ ...+++++.+.|+++++||+||+.++++|++|++.+.+. +...+|.++|||++|+|+++|++++.|++||
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~ev~v~v~~~~i~~~d~~~~~~~-~~~~~~~~~g~e~~G~v~~vG~~v~~~~~Gd   80 (325)
T cd08264           2 KALVFEKSGIENLKVEDVKDPKPGPGEVLIRVKMAGVNPVDYNVINAV-KVKPMPHIPGAEFAGVVEEVGDHVKGVKKGD   80 (325)
T ss_pred             eeEEeccCCCCceEEEeccCCCCCCCeEEEEEEEEEechHHHHHHhCC-CCCCCCeecccceeEEEEEECCCCCCCCCCC
Confidence            45555322 356778888888899999999999999999999987642 2223467899999999999999999999999


Q ss_pred             EEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhhhh
Q 018382           90 KVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVF  169 (357)
Q Consensus        90 ~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~  169 (357)
                      +|++.+.. +|+.|..|..|..+.|.++.+.       +....|+|++|+.++++.++++|+++++++++.+++.+.+||
T Consensus        81 ~V~~~~~~-~~~~c~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~  152 (325)
T cd08264          81 RVVVYNRV-FDGTCDMCLSGNEMLCRNGGII-------GVVSNGGYAEYIVVPEKNLFKIPDSISDELAASLPVAALTAY  152 (325)
T ss_pred             EEEECCCc-CCCCChhhcCCCccccCcccee-------eccCCCceeeEEEcCHHHceeCCCCCCHHHhhhhhhhhHHHH
Confidence            99877655 7999999999999999976532       233579999999999999999999999999999999999999


Q ss_pred             hhhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCCh-hHHHHhhCCccE
Q 018382          170 SPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDA-TRMQEAADSLDY  247 (357)
Q Consensus       170 ~~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~-~~~~~~~~~~d~  247 (357)
                      +++.. ..++++++|+|+|+ |++|++++++|+..|++|+++++    .+.+++ +|++++++.++. +.+..+.+++|+
T Consensus       153 ~~l~~-~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~~v~~~~~----~~~~~~-~g~~~~~~~~~~~~~l~~~~~~~d~  226 (325)
T cd08264         153 HALKT-AGLGPGETVVVFGASGNTGIFAVQLAKMMGAEVIAVSR----KDWLKE-FGADEVVDYDEVEEKVKEITKMADV  226 (325)
T ss_pred             HHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeH----HHHHHH-hCCCeeecchHHHHHHHHHhCCCCE
Confidence            99876 56699999999997 99999999999999999988863    355655 999888876542 223333378999


Q ss_pred             EEEcCCCCCChHHHHhccccCCeEEEEccCCC-CcccchHHHhhccceEEEEeecCHHHHHHHHHHHHhcCCCccE-EEe
Q 018382          248 IIDTVPANHPLEPYLSLLKLDGKLILTGVINT-PMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMI-EVI  325 (357)
Q Consensus       248 v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~~i-~~~  325 (357)
                      +++++|.. .+..++++++++|+++.+|.... ...++...++.++.++.++..+..+.++.+++++...  +..+ ++|
T Consensus       227 vl~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~  303 (325)
T cd08264         227 VINSLGSS-FWDLSLSVLGRGGRLVTFGTLTGGEVKLDLSDLYSKQISIIGSTGGTRKELLELVKIAKDL--KVKVWKTF  303 (325)
T ss_pred             EEECCCHH-HHHHHHHhhccCCEEEEEecCCCCCCccCHHHHhhcCcEEEEccCCCHHHHHHHHHHHHcC--CceeEEEE
Confidence            99999986 88999999999999999986422 2445556667788889998888888899999999543  3445 899


Q ss_pred             ecccHHHHHHHHHcCCccEEE
Q 018382          326 KMDYVNKAFERLEKNDVRYRF  346 (357)
Q Consensus       326 ~~~~~~~a~~~~~~~~~~Gkv  346 (357)
                      +++++++|++.+.+++..||+
T Consensus       304 ~~~~~~~a~~~~~~~~~~~kv  324 (325)
T cd08264         304 KLEEAKEALKELFSKERDGRI  324 (325)
T ss_pred             cHHHHHHHHHHHHcCCCcccc
Confidence            999999999999988877775

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo

>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

Probab=100.00  E-value=9.4e-40  Score=303.00  Aligned_cols=330  Identities=24%  Similarity=0.302  Sum_probs=269.0

Q ss_pred             eeeehccCCCCCcceeeeecCCCC-CCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCCC
Q 018382           10 TIGWAAKDPSGILSPYTYTLRNTG-AEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVG   88 (357)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~p~~~-~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~G   88 (357)
                      |++|+.. +++.++++++++|+|. ++||+|++.++++|+.|+.+..|.++ ..+|.++|+|++|+|+++|++++++++|
T Consensus         1 ~~a~~~~-~~~~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~-~~~~~~~g~e~~G~V~~vG~~v~~~~~G   78 (344)
T cd08284           1 MKAVVFK-GPGDVRVEEVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIP-STPGFVLGHEFVGEVVEVGPEVRTLKVG   78 (344)
T ss_pred             CeeEEEe-cCCCceEEeccCCCCCCCCeEEEEEEEeeccccchhhhcCCCC-CCCCcccccceEEEEEeeCCCccccCCC
Confidence            3566665 4568999999999985 99999999999999999999888665 3457789999999999999999999999


Q ss_pred             CEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCc--ceEECCCCCCccccccccchhh
Q 018382           89 DKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQK--FVVKIPDGMALEQAAPLLCAGV  166 (357)
Q Consensus        89 d~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~--~~~~lP~~l~~~~aa~~~~~~~  166 (357)
                      |+|++.+.. +|++|..|..+.++.|++....+..   .....+|++++|+.++++  .++++|++++++++++++..+.
T Consensus        79 d~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g~~~~~~~v~~~~~~~~~~p~~l~~~~a~~l~~~~~  154 (344)
T cd08284          79 DRVVSPFTI-ACGECFYCRRGQSGRCAKGGLFGYA---GSPNLDGAQAEYVRVPFADGTLLKLPDGLSDEAALLLGDILP  154 (344)
T ss_pred             CEEEEcccC-CCCCChHHhCcCcccCCCCcccccc---ccCCCCCceeEEEEcccccCceEECCCCCCHHHhhhhcCchH
Confidence            999876554 5999999999999999875432110   011247999999999975  9999999999999999999999


Q ss_pred             hhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCcEEEcCCChhH---HHHhh
Q 018382          167 TVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGADQYLVSSDATR---MQEAA  242 (357)
Q Consensus       167 ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~---~~~~~  242 (357)
                      |||+++.. ..+.++++|||+|+|.+|++++|+|+..|+ +|+++++++++...+.+ +|+. .++.+..++   +.++.
T Consensus       155 ta~~~~~~-~~~~~~~~vlI~g~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~-~g~~-~~~~~~~~~~~~l~~~~  231 (344)
T cd08284         155 TGYFGAKR-AQVRPGDTVAVIGCGPVGLCAVLSAQVLGAARVFAVDPVPERLERAAA-LGAE-PINFEDAEPVERVREAT  231 (344)
T ss_pred             HHHhhhHh-cCCccCCEEEEECCcHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHH-hCCe-EEecCCcCHHHHHHHHh
Confidence            99999976 455899999999889999999999999997 89999878777777666 9975 355544322   33333


Q ss_pred             --CCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCC-cccchHHHhhccceEEEEeecCHHHHHHHHHHHHhcCCC
Q 018382          243 --DSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTP-MQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVT  319 (357)
Q Consensus       243 --~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~  319 (357)
                        +++|++||+++....+..++++++++|+++.+|..... ........+.++.++.+......+.++.+++++.++.++
T Consensus       232 ~~~~~dvvid~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  311 (344)
T cd08284         232 EGRGADVVLEAVGGAAALDLAFDLVRPGGVISSVGVHTAEEFPFPGLDAYNKNLTLRFGRCPVRSLFPELLPLLESGRLD  311 (344)
T ss_pred             CCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEECcCCCCCccccHHHHhhcCcEEEEecCCcchhHHHHHHHHHcCCCC
Confidence              37999999999754788999999999999999876532 233444556777887765555567899999999999988


Q ss_pred             c--cE-EEeecccHHHHHHHHHcCCccEEEEEe
Q 018382          320 S--MI-EVIKMDYVNKAFERLEKNDVRYRFVVD  349 (357)
Q Consensus       320 ~--~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~  349 (357)
                      +  .+ ++|+++++++|++.+++++. ||+|++
T Consensus       312 ~~~~~~~~~~~~~~~~a~~~~~~~~~-~k~Vi~  343 (344)
T cd08284         312 LEFLIDHRMPLEEAPEAYRLFDKRKV-LKVVLD  343 (344)
T ss_pred             hHHhEeeeecHHHHHHHHHHHhcCCc-eEEEec
Confidence            5  35 89999999999999998887 999975

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical

>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like

Probab=100.00  E-value=1.8e-39  Score=301.17  Aligned_cols=327  Identities=19%  Similarity=0.259  Sum_probs=266.8

Q ss_pred             eeeehccCCCCCcceeeeecCCC-CCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCCC
Q 018382           10 TIGWAAKDPSGILSPYTYTLRNT-GAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVG   88 (357)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~p~~-~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~G   88 (357)
                      |++|.+. +++.+.+.+.|+|+| +++||+||+.++++|++|++.+.|.++. ..|.++|||++|+|+++|++++.|++|
T Consensus         1 m~~~~~~-~~~~~~~~~~~~p~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~-~~~~~~g~e~~G~V~~vG~~v~~~~~G   78 (345)
T cd08287           1 MRATVIH-GPGDIRVEEVPDPVIEEPTDAVIRVVATCVCGSDLWPYRGVSPT-RAPAPIGHEFVGVVEEVGSEVTSVKPG   78 (345)
T ss_pred             CceeEEe-cCCceeEEeCCCCCCCCCCeEEEEEeeeeecccchhhhcCCCCC-CCCcccccceEEEEEEeCCCCCccCCC
Confidence            3566665 466799999999996 9999999999999999999998887652 457899999999999999999999999


Q ss_pred             CEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCc--ceEECCCCCCccccc-----cc
Q 018382           89 DKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQK--FVVKIPDGMALEQAA-----PL  161 (357)
Q Consensus        89 d~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~--~~~~lP~~l~~~~aa-----~~  161 (357)
                      |+|++. ....||.|..|..+..+.|....+.       +...+|+|++|+.++.+  .++++|++++++.+.     ++
T Consensus        79 d~V~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~v~~~~~~~~~lP~~l~~~~~~~~~~~~l  150 (345)
T cd08287          79 DFVIAP-FAISDGTCPFCRAGFTTSCVHGGFW-------GAFVDGGQGEYVRVPLADGTLVKVPGSPSDDEDLLPSLLAL  150 (345)
T ss_pred             CEEEec-cccCCCCChhhhCcCcccCCCCCcc-------cCCCCCceEEEEEcchhhCceEECCCCCChhhhhhhhhHhh
Confidence            999663 3445999999999999999875543       23478999999999975  999999999983221     23


Q ss_pred             cchhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCe-EEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHH
Q 018382          162 LCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHH-VTVISSSDKKRVEAMEHLGADQYLVSSDATRMQE  240 (357)
Q Consensus       162 ~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~-V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~  240 (357)
                      ...+.+||.++.. ..++++++|+|.|+|++|++++|+|+..|++ ++++++++++.+.+++ +|++++++++..+..++
T Consensus       151 ~~~~~~a~~~~~~-~~~~~g~~vlI~g~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~~~-~ga~~v~~~~~~~~~~~  228 (345)
T cd08287         151 SDVMGTGHHAAVS-AGVRPGSTVVVVGDGAVGLCAVLAAKRLGAERIIAMSRHEDRQALARE-FGATDIVAERGEEAVAR  228 (345)
T ss_pred             hcHHHHHHHHHHh-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-cCCceEecCCcccHHHH
Confidence            3567889988864 4558999999988899999999999999995 7777777777766666 99999998876544343


Q ss_pred             h---hC--CccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCcccchHHHhhccceEEEEeecCHHHHHHHHHHHHh
Q 018382          241 A---AD--SLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCRE  315 (357)
Q Consensus       241 ~---~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~  315 (357)
                      +   ..  ++|++||++|+...+..++++++++|+++.++.......++....+.++.++.+......+.++++++++.+
T Consensus       229 i~~~~~~~~~d~il~~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  308 (345)
T cd08287         229 VRELTGGVGADAVLECVGTQESMEQAIAIARPGGRVGYVGVPHGGVELDVRELFFRNVGLAGGPAPVRRYLPELLDDVLA  308 (345)
T ss_pred             HHHhcCCCCCCEEEECCCCHHHHHHHHHhhccCCEEEEecccCCCCccCHHHHHhcceEEEEecCCcHHHHHHHHHHHHc
Confidence            3   22  699999999876578899999999999999987654444555455678899988776667789999999999


Q ss_pred             cCCCc--cE-EEeecccHHHHHHHHHcCCccEEEEEe
Q 018382          316 KGVTS--MI-EVIKMDYVNKAFERLEKNDVRYRFVVD  349 (357)
Q Consensus       316 ~~l~~--~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~  349 (357)
                      +.+++  .+ +.|+++++++|++.+++++.. |++|+
T Consensus       309 ~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~-k~~~~  344 (345)
T cd08287         309 GRINPGRVFDLTLPLDEVAEGYRAMDERRAI-KVLLR  344 (345)
T ss_pred             CCCCHHHhEEeeecHHHHHHHHHHHhCCCce-EEEeC
Confidence            99986  34 899999999999998877664 99885

This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=1.4e-39  Score=298.72  Aligned_cols=316  Identities=22%  Similarity=0.299  Sum_probs=259.9

Q ss_pred             eeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCCCC
Q 018382           10 TIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGD   89 (357)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd   89 (357)
                      |+++++.+ ++++.+.+++.|+++++||+||++++++|++|+....|..+   .|.++|+|++|+|+++|++   +++||
T Consensus         1 ~~a~~~~~-~~~~~~~~~~~p~~~~~~vlV~v~a~~i~~~d~~~~~g~~~---~~~~~G~e~~G~Vv~~G~~---~~~G~   73 (319)
T cd08242           1 MKALVLDG-GLDLRVEDLPKPEPPPGEALVRVLLAGICNTDLEIYKGYYP---FPGVPGHEFVGIVEEGPEA---ELVGK   73 (319)
T ss_pred             CeeEEEeC-CCcEEEEECCCCCCCCCeEEEEEEEEEEccccHHHHcCCCC---CCCccCceEEEEEEEeCCC---CCCCC
Confidence            35677654 56889999999999999999999999999999999888653   5778999999999999998   67999


Q ss_pred             EEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhhhh
Q 018382           90 KVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVF  169 (357)
Q Consensus        90 ~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~  169 (357)
                      +|...+.. .|+.|..|..|.++.|.+......      ...+|++++|++++.+.++++|++++.++++.+ ....++|
T Consensus        74 ~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~------~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~~~  145 (319)
T cd08242          74 RVVGEINI-ACGRCEYCRRGLYTHCPNRTVLGI------VDRDGAFAEYLTLPLENLHVVPDLVPDEQAVFA-EPLAAAL  145 (319)
T ss_pred             eEEECCCc-CCCCChhhhCcCcccCCCCcccCc------cCCCCceEEEEEechHHeEECcCCCCHHHhhhh-hHHHHHH
Confidence            99665554 599999999999999886542211      124799999999999999999999999988864 4445666


Q ss_pred             hhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEE
Q 018382          170 SPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYII  249 (357)
Q Consensus       170 ~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~  249 (357)
                      .++ ....++++++|||+|+|.+|++++|+|+..|++|+++++++++.+.+++ +|++.+++.++.    .-.+++|++|
T Consensus       146 ~~~-~~~~~~~g~~vlV~g~g~vg~~~~q~a~~~G~~vi~~~~~~~~~~~~~~-~g~~~~~~~~~~----~~~~~~d~vi  219 (319)
T cd08242         146 EIL-EQVPITPGDKVAVLGDGKLGLLIAQVLALTGPDVVLVGRHSEKLALARR-LGVETVLPDEAE----SEGGGFDVVV  219 (319)
T ss_pred             HHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHH-cCCcEEeCcccc----ccCCCCCEEE
Confidence            655 4455689999999998999999999999999999999999999988888 999888776542    1224799999


Q ss_pred             EcCCCCCChHHHHhccccCCeEEEEccCCCCcccchHHHhhccceEEEEeecCHHHHHHHHHHHHhcCCC--ccE-EEee
Q 018382          250 DTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVT--SMI-EVIK  326 (357)
Q Consensus       250 d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~--~~i-~~~~  326 (357)
                      |++|....+..++++++++|+++..+.......++...+..++.++.+...+.   ++++++++.++.++  +.+ ++|+
T Consensus       220 d~~g~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~---~~~~~~~~~~~~l~~~~~~~~~~~  296 (319)
T cd08242         220 EATGSPSGLELALRLVRPRGTVVLKSTYAGPASFDLTKAVVNEITLVGSRCGP---FAPALRLLRKGLVDVDPLITAVYP  296 (319)
T ss_pred             ECCCChHHHHHHHHHhhcCCEEEEEcccCCCCccCHHHheecceEEEEEeccc---HHHHHHHHHcCCCChhhceEEEEe
Confidence            99988657888999999999999876654444455556677888888876543   77888999999984  456 9999


Q ss_pred             cccHHHHHHHHHcCCccEEEEEec
Q 018382          327 MDYVNKAFERLEKNDVRYRFVVDV  350 (357)
Q Consensus       327 ~~~~~~a~~~~~~~~~~Gkvvi~~  350 (357)
                      ++++++||+.++++. .+|++|+.
T Consensus       297 l~~~~~a~~~~~~~~-~~k~vi~~  319 (319)
T cd08242         297 LEEALEAFERAAEPG-ALKVLLRP  319 (319)
T ss_pred             HHHHHHHHHHHhcCC-ceEEEeCC
Confidence            999999999998776 48998863

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta

>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=3.2e-39  Score=299.10  Aligned_cols=317  Identities=23%  Similarity=0.324  Sum_probs=254.1

Q ss_pred             eeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCC-----------CCCCCCccCccccEEEEEe
Q 018382           10 TIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLG-----------MSNYPMVPGHEVVGEVKEV   78 (357)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~-----------~~~~p~~lG~e~~G~V~~v   78 (357)
                      |+++++..+  .+++++++.|+++++||+||+.++++|+.|++...|...           ....|.++|+|++|+|+++
T Consensus         1 m~a~~~~~~--~~~~~~~~~p~~~~~~v~V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~v   78 (341)
T cd08262           1 MRAAVFRDG--PLVVRDVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGEVVDY   78 (341)
T ss_pred             CceEEEeCC--ceEEEecCCCCCCCCeEEEEEEEEEEcccchHHHcCCCcccccccccccccCCCCcccccceeEEEEEe
Confidence            356666533  788899999999999999999999999999999887321           2234778999999999999


Q ss_pred             CCCCCC-CCCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccc
Q 018382           79 GSEVSN-FKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQ  157 (357)
Q Consensus        79 G~~v~~-~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~  157 (357)
                      |+++++ |++||+|+..++ ..|+.|..|..|..                 ....|+|+||++++.+.++++|+++++++
T Consensus        79 G~~v~~~~~~Gd~V~~~~~-~~~~~~~~~~~~~~-----------------~~~~g~~~~~~~v~~~~~~~lP~~~s~~~  140 (341)
T cd08262          79 GPGTERKLKVGTRVTSLPL-LLCGQGASCGIGLS-----------------PEAPGGYAEYMLLSEALLLRVPDGLSMED  140 (341)
T ss_pred             CCCCcCCCCCCCEEEecCC-cCCCCChhhhCCCC-----------------cCCCCceeeeEEechHHeEECCCCCCHHH
Confidence            999997 999999977755 45899999843210                 12579999999999999999999999998


Q ss_pred             cccccchhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCe-EEEEeCCcHHHHHHHHhcCCcEEEcCCChh
Q 018382          158 AAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHH-VTVISSSDKKRVEAMEHLGADQYLVSSDAT  236 (357)
Q Consensus       158 aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~-V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~  236 (357)
                      ++ ++..+++||+++ ....++++++|||+|+|++|.+++|+|+..|++ ++++++++++.+.+.+ +|++++++.+..+
T Consensus       141 a~-~~~~~~~a~~~~-~~~~~~~g~~VlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~-~g~~~~i~~~~~~  217 (341)
T cd08262         141 AA-LTEPLAVGLHAV-RRARLTPGEVALVIGCGPIGLAVIAALKARGVGPIVASDFSPERRALALA-MGADIVVDPAADS  217 (341)
T ss_pred             hh-hhhhHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHH-cCCcEEEcCCCcC
Confidence            77 677888999986 555669999999998899999999999999996 5566666777766665 9999999876542


Q ss_pred             H------HHHhh--CCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCcccchHHHhhccceEEEEeecCHHHHHH
Q 018382          237 R------MQEAA--DSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKE  308 (357)
Q Consensus       237 ~------~~~~~--~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~  308 (357)
                      .      +....  +++|++||++|+...+..++++++++|+++.+|...............++.++.++...+.+.+++
T Consensus       218 ~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (341)
T cd08262         218 PFAAWAAELARAGGPKPAVIFECVGAPGLIQQIIEGAPPGGRIVVVGVCMESDNIEPALAIRKELTLQFSLGYTPEEFAD  297 (341)
T ss_pred             HHHHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCCccCHHHHhhcceEEEEEecccHHHHHH
Confidence            1      11122  369999999987436788999999999999998764332222222345777777776667778899


Q ss_pred             HHHHHHhcCCCc--cE-EEeecccHHHHHHHHHcCCccEEEEEe
Q 018382          309 MLEFCREKGVTS--MI-EVIKMDYVNKAFERLEKNDVRYRFVVD  349 (357)
Q Consensus       309 ~~~~~~~~~l~~--~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~  349 (357)
                      +++++.++.+.+  .+ ++|+++++++|++.+++++..||++++
T Consensus       298 ~~~l~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~~~~kvvv~  341 (341)
T cd08262         298 ALDALAEGKVDVAPMVTGTVGLDGVPDAFEALRDPEHHCKILVD  341 (341)
T ss_pred             HHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcCCCceEEEeC
Confidence            999999999975  34 899999999999999999999999874

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]

Probab=100.00  E-value=1.3e-39  Score=275.69  Aligned_cols=308  Identities=20%  Similarity=0.262  Sum_probs=255.7

Q ss_pred             hheeeehccCCC-CCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCC-CCCCCCccCccccEEEEEeCCCCCCC
Q 018382            8 RATIGWAAKDPS-GILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLG-MSNYPMVPGHEVVGEVKEVGSEVSNF   85 (357)
Q Consensus         8 ~~~~~~~~~~~~-~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~-~~~~p~~lG~e~~G~V~~vG~~v~~~   85 (357)
                      .+..++..++.| +.++++++++|.....+|+||..|+.|||+|+..++|.+| .+.+|.+-|.|++|+|+.+|+++.+|
T Consensus        20 ~kalvY~~hgdP~kVlql~~~~~p~~~~s~v~Vk~LAaPINPsDIN~IQGvYpvrP~~PAVgGnEGv~eVv~vGs~vkgf   99 (354)
T KOG0025|consen   20 SKALVYSEHGDPAKVLQLKNLELPAVPGSDVLVKMLAAPINPSDINQIQGVYPVRPELPAVGGNEGVGEVVAVGSNVKGF   99 (354)
T ss_pred             cceeeecccCCchhhheeecccCCCCCCCceeeeeeecCCChHHhhhhccccCCCCCCCcccCCcceEEEEEecCCcCcc
Confidence            333444444433 4578889999999888899999999999999999999999 67889999999999999999999999


Q ss_pred             CCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchh
Q 018382           86 KVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAG  165 (357)
Q Consensus        86 ~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~  165 (357)
                      ++||+|...                                  ....|+|++|.+.+++.++++++.++++.||++....
T Consensus       100 k~Gd~VIp~----------------------------------~a~lGtW~t~~v~~e~~Li~vd~~~pl~~AAT~~VNP  145 (354)
T KOG0025|consen  100 KPGDWVIPL----------------------------------SANLGTWRTEAVFSESDLIKVDKDIPLASAATLSVNP  145 (354)
T ss_pred             CCCCeEeec----------------------------------CCCCccceeeEeecccceEEcCCcCChhhhheeccCc
Confidence            999999543                                  3468999999999999999999999999999999999


Q ss_pred             hhhhhhhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHH---HhcCCcEEEcCCC---hhHH
Q 018382          166 VTVFSPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAM---EHLGADQYLVSSD---ATRM  238 (357)
Q Consensus       166 ~ta~~~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~---~~~g~~~vv~~~~---~~~~  238 (357)
                      +|||.+|.+.-.+++|++|+-.|+ +++|++.||+|+++|++-+.++|++...++++   +.+||++++...+   .+..
T Consensus       146 ~TAyrmL~dfv~L~~GD~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~~~~~~  225 (354)
T KOG0025|consen  146 CTAYRMLKDFVQLNKGDSVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEELRDRKMK  225 (354)
T ss_pred             hHHHHHHHHHHhcCCCCeeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHHHhcchhhh
Confidence            999999999999999998888888 99999999999999999999998876554443   2489999985332   1222


Q ss_pred             HHh--hCCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCC-CcccchHHHhhccceEEEEeecCH-----------H
Q 018382          239 QEA--ADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINT-PMQFLTPMVMLGRKAITGSFIGSM-----------K  304 (357)
Q Consensus       239 ~~~--~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~~-----------~  304 (357)
                      +..  ...+...|||+|+. ......+.|..+|.++.+|..+. +..++...++++++.+.|+++..+           +
T Consensus       226 k~~~~~~~prLalNcVGGk-sa~~iar~L~~GgtmvTYGGMSkqPv~~~ts~lIFKdl~~rGfWvt~W~~~~~~pe~~~~  304 (354)
T KOG0025|consen  226 KFKGDNPRPRLALNCVGGK-SATEIARYLERGGTMVTYGGMSKQPVTVPTSLLIFKDLKLRGFWVTRWKKEHKSPEERKE  304 (354)
T ss_pred             hhhccCCCceEEEeccCch-hHHHHHHHHhcCceEEEecCccCCCcccccchheeccceeeeeeeeehhhccCCcHHHHH
Confidence            221  22799999999999 77888899999999999998764 467888889999999999998644           4


Q ss_pred             HHHHHHHHHHhcCCCccE-EEeecccHHHHHHHHH-cCCccEEEEEec
Q 018382          305 ETKEMLEFCREKGVTSMI-EVIKMDYVNKAFERLE-KNDVRYRFVVDV  350 (357)
Q Consensus       305 ~~~~~~~~~~~~~l~~~i-~~~~~~~~~~a~~~~~-~~~~~Gkvvi~~  350 (357)
                      .+.++.++++.|+|+.+- ...+|++...|++... .-...||-+|.+
T Consensus       305 ~i~~~~~l~~~G~i~~~~~e~v~L~~~~tald~~L~~~~~~~Kq~i~~  352 (354)
T KOG0025|consen  305 MIDELCDLYRRGKLKAPNCEKVPLADHKTALDAALSKFGKSGKQIIVL  352 (354)
T ss_pred             HHHHHHHHHHcCeeccccceeeechhhhHHHHHHHHHhccCCceEEEe
Confidence            467888999999999876 8889999989888443 333336666654

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=100.00  E-value=3.2e-39  Score=296.84  Aligned_cols=301  Identities=23%  Similarity=0.307  Sum_probs=252.7

Q ss_pred             eeehccCCC---CCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCC-CCCCCCccCccccEEEEEeCCCCCCCC
Q 018382           11 IGWAAKDPS---GILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLG-MSNYPMVPGHEVVGEVKEVGSEVSNFK   86 (357)
Q Consensus        11 ~~~~~~~~~---~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~-~~~~p~~lG~e~~G~V~~vG~~v~~~~   86 (357)
                      +++++...+   +.+++.+++.|.+.++||+||+.++++|++|++.+.|.++ ....|.++|||++|+|+++|+++++|+
T Consensus         2 ~a~~~~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~   81 (324)
T cd08292           2 RAAVHTQFGDPADVLEIGEVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYGYKPELPAIGGSEAVGVVDAVGEGVKGLQ   81 (324)
T ss_pred             eeEEEccCCChhHeEEEeecCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCCCCCcceEEEEEEeCCCCCCCC
Confidence            455554322   2377889999999999999999999999999999988765 334578899999999999999999999


Q ss_pred             CCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhh
Q 018382           87 VGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGV  166 (357)
Q Consensus        87 ~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~  166 (357)
                      +||+|++.                                   ...|+|++|+.++...++++|+++++++++.+++.+.
T Consensus        82 ~Gd~V~~~-----------------------------------~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~  126 (324)
T cd08292          82 VGQRVAVA-----------------------------------PVHGTWAEYFVAPADGLVPLPDGISDEVAAQLIAMPL  126 (324)
T ss_pred             CCCEEEec-----------------------------------cCCCcceeEEEEchHHeEECCCCCCHHHhhhccccHH
Confidence            99999753                                   1368999999999999999999999999999999999


Q ss_pred             hhhhhhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHH---Hhh
Q 018382          167 TVFSPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQ---EAA  242 (357)
Q Consensus       167 ta~~~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~---~~~  242 (357)
                      +||+++.. ..+++|++|||+|+ |.+|++++|+|+.+|++|+++++++++.+.+++ +|++++++.++.+..+   ...
T Consensus       127 ta~~~~~~-~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~i~~~~  204 (324)
T cd08292         127 SALMLLDF-LGVKPGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELRA-LGIGPVVSTEQPGWQDKVREAA  204 (324)
T ss_pred             HHHHHHHh-hCCCCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHHh-cCCCEEEcCCCchHHHHHHHHh
Confidence            99998865 56699999999986 999999999999999999999999998888887 8999998887654433   333


Q ss_pred             C--CccEEEEcCCCCCChHHHHhccccCCeEEEEccCCC-CcccchHHHhhccceEEEEeecC----------HHHHHHH
Q 018382          243 D--SLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINT-PMQFLTPMVMLGRKAITGSFIGS----------MKETKEM  309 (357)
Q Consensus       243 ~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~----------~~~~~~~  309 (357)
                      .  ++|++||++|+. ....++++++++|+++.+|.... ...+.....+.++.++.++....          .+.++++
T Consensus       205 ~~~~~d~v~d~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (324)
T cd08292         205 GGAPISVALDSVGGK-LAGELLSLLGEGGTLVSFGSMSGEPMQISSGDLIFKQATVRGFWGGRWSQEMSVEYRKRMIAEL  283 (324)
T ss_pred             CCCCCcEEEECCCCh-hHHHHHHhhcCCcEEEEEecCCCCCCcCCHHHHhhCCCEEEEEEcHHhhhhcCHHHHHHHHHHH
Confidence            3  799999999987 78899999999999999986532 23344444567888988887642          2457889


Q ss_pred             HHHHHhcCCCccE-EEeecccHHHHHHHHHcCCccEEEEEe
Q 018382          310 LEFCREKGVTSMI-EVIKMDYVNKAFERLEKNDVRYRFVVD  349 (357)
Q Consensus       310 ~~~~~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~  349 (357)
                      ++++.++.+.+.+ ++|+++++.+|++.+.++...||++++
T Consensus       284 ~~l~~~g~i~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvv~  324 (324)
T cd08292         284 LTLALKGQLLLPVEAVFDLGDAAKAAAASMRPGRAGKVLLR  324 (324)
T ss_pred             HHHHHCCCccCccccEecHHHHHHHHHHHHcCCCCceEEeC
Confidence            9999999998666 899999999999999988888999874

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>cd05285 sorbitol_DH Sorbitol dehydrogenase

Probab=100.00  E-value=4.9e-39  Score=298.06  Aligned_cols=320  Identities=24%  Similarity=0.359  Sum_probs=261.4

Q ss_pred             CCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcC-CC--CCCCCCccCccccEEEEEeCCCCCCCCCCCEEEEc
Q 018382           18 PSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKND-LG--MSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVG   94 (357)
Q Consensus        18 ~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~-~~--~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~   94 (357)
                      ++..+.+++++.|.|.++||+||+.++++|+.|++.+.+. .+  ....|.++|+|++|+|+++|+++++|++||+|++.
T Consensus         6 ~~~~~~~~~~~~~~l~~~~vlV~v~~~~l~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~   85 (343)
T cd05285           6 GPGDLRLEERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHESAGTVVAVGSGVTHLKVGDRVAIE   85 (343)
T ss_pred             cCCceeEEECCCCCCCCCeEEEEEEEeeEccccHHHHccCCCcccCCCCCcccCcceeEEEEeeCCCCCCCCCCCEEEEc
Confidence            3467888999999999999999999999999999876432 11  11356689999999999999999999999999766


Q ss_pred             cccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhhhhhhhhc
Q 018382           95 VLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSH  174 (357)
Q Consensus        95 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~  174 (357)
                      +.. +|++|..|+.|..+.|++..+..      .....|+|++|++++.+.++++|+++++++++.+ ..+.+||+++ .
T Consensus        86 ~~~-~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~~-~  156 (343)
T cd05285          86 PGV-PCRTCEFCKSGRYNLCPDMRFAA------TPPVDGTLCRYVNHPADFCHKLPDNVSLEEGALV-EPLSVGVHAC-R  156 (343)
T ss_pred             ccc-CCCCChhHhCcCcccCcCccccc------cccCCCceeeeEEecHHHcEECcCCCCHHHhhhh-hHHHHHHHHH-H
Confidence            444 79999999999999998643311      1124799999999999999999999999999876 5778899887 5


Q ss_pred             cCCCCCCCeEEEEecChHHHHHHHHHHHcCCe-EEEEeCCcHHHHHHHHhcCCcEEEcCCChhH------HHHhhC--Cc
Q 018382          175 FGLKQSGLRGGILGLGGVGHMGVLIAKAMGHH-VTVISSSDKKRVEAMEHLGADQYLVSSDATR------MQEAAD--SL  245 (357)
Q Consensus       175 ~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~-V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~------~~~~~~--~~  245 (357)
                      ...++++++|||+|+|.+|++++|+|+..|++ |+++++++++.+.+++ +|++++++.++.+.      +.+...  ++
T Consensus       157 ~~~~~~g~~vlI~g~g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~~~-~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~  235 (343)
T cd05285         157 RAGVRPGDTVLVFGAGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAKE-LGATHTVNVRTEDTPESAEKIAELLGGKGP  235 (343)
T ss_pred             hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHH-cCCcEEeccccccchhHHHHHHHHhCCCCC
Confidence            56669999999998899999999999999997 8888888888888866 99999998776432      333332  59


Q ss_pred             cEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCcccchHHHhhccceEEEEeecCHHHHHHHHHHHHhcCCC--ccE-
Q 018382          246 DYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVT--SMI-  322 (357)
Q Consensus       246 d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~--~~i-  322 (357)
                      |++|||.|....+...+++++++|+++.++.......++...+..+..++.++.... +.++.+++++.++.+.  +.+ 
T Consensus       236 d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~l~~~~~~~  314 (343)
T cd05285         236 DVVIECTGAESCIQTAIYATRPGGTVVLVGMGKPEVTLPLSAASLREIDIRGVFRYA-NTYPTAIELLASGKVDVKPLIT  314 (343)
T ss_pred             CEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCCccCHHHHhhCCcEEEEeccCh-HHHHHHHHHHHcCCCCchHhEE
Confidence            999999997546788999999999999998654433444445667788888776544 6788899999999875  344 


Q ss_pred             EEeecccHHHHHHHHHcCC-ccEEEEE
Q 018382          323 EVIKMDYVNKAFERLEKND-VRYRFVV  348 (357)
Q Consensus       323 ~~~~~~~~~~a~~~~~~~~-~~Gkvvi  348 (357)
                      ++|+++++.+|++.+.+++ ..+|++|
T Consensus       315 ~~~~l~~~~~a~~~~~~~~~~~~k~~~  341 (343)
T cd05285         315 HRFPLEDAVEAFETAAKGKKGVIKVVI  341 (343)
T ss_pred             EEEeHHHHHHHHHHHHcCCCCeeEEEE
Confidence            8999999999999999885 4589988

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>PLN02702 L-idonate 5-dehydrogenase

Probab=100.00  E-value=8.4e-39  Score=298.78  Aligned_cols=321  Identities=24%  Similarity=0.367  Sum_probs=256.1

Q ss_pred             CCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCC---CCCCCCccCccccEEEEEeCCCCCCCCCCCEEEEc
Q 018382           18 PSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLG---MSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVG   94 (357)
Q Consensus        18 ~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~---~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~   94 (357)
                      ++..+++++++.|+|.++||+||+.++++|++|++++.+...   ....|.++|||++|+|+++|+++++|++||+|++.
T Consensus        25 ~~~~l~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~  104 (364)
T PLN02702         25 GVNTLKIQPFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIEEVGSEVKHLVVGDRVALE  104 (364)
T ss_pred             cCCceEEEeccCCCCCCCeEEEEEEEEEEchhhhHHHcCCCCccccCCCCcccccceeEEEEEECCCCCCCCCCCEEEEc
Confidence            356788889999999999999999999999999998876321   12357789999999999999999999999999776


Q ss_pred             cccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhhhhhhhhc
Q 018382           95 VLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSH  174 (357)
Q Consensus        95 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~  174 (357)
                      +.. +|+.|..|..|..+.|+...+..      ....+|+|++|++++.+.++++|++++++++++. ..+.++|.++ .
T Consensus       105 ~~~-~~~~c~~c~~g~~~~c~~~~~~~------~~~~~g~~~~y~~v~~~~~~~~P~~l~~~~aa~~-~~~~~a~~~~-~  175 (364)
T PLN02702        105 PGI-SCWRCNLCKEGRYNLCPEMKFFA------TPPVHGSLANQVVHPADLCFKLPENVSLEEGAMC-EPLSVGVHAC-R  175 (364)
T ss_pred             CCC-CCCCCcchhCcCcccCCCccccC------CCCCCCcccceEEcchHHeEECCCCCCHHHHhhh-hHHHHHHHHH-H
Confidence            654 69999999999999998643221      1124799999999999999999999999998752 2344577777 4


Q ss_pred             cCCCCCCCeEEEEecChHHHHHHHHHHHcCCe-EEEEeCCcHHHHHHHHhcCCcEEEcCC--ChhH---HHHh----hCC
Q 018382          175 FGLKQSGLRGGILGLGGVGHMGVLIAKAMGHH-VTVISSSDKKRVEAMEHLGADQYLVSS--DATR---MQEA----ADS  244 (357)
Q Consensus       175 ~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~-V~~~~~~~~~~~~~~~~~g~~~vv~~~--~~~~---~~~~----~~~  244 (357)
                      ...+.++++|+|+|+|++|++++|+|+..|++ |+++++++++.+.+++ +|++++++..  ..+.   +..+    .++
T Consensus       176 ~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (364)
T PLN02702        176 RANIGPETNVLVMGAGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQ-LGADEIVLVSTNIEDVESEVEEIQKAMGGG  254 (364)
T ss_pred             hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-hCCCEEEecCcccccHHHHHHHHhhhcCCC
Confidence            45558999999999899999999999999995 6667777777776666 9998877643  2222   2222    137


Q ss_pred             ccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCcccchHHHhhccceEEEEeecCHHHHHHHHHHHHhcCCC--ccE
Q 018382          245 LDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVT--SMI  322 (357)
Q Consensus       245 ~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~--~~i  322 (357)
                      +|++||++|....+..++++++++|+++.+|.......+.......+++++.+++.. ...++.++++++++.+.  +.+
T Consensus       255 ~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~l~~~~~~  333 (364)
T PLN02702        255 IDVSFDCVGFNKTMSTALEATRAGGKVCLVGMGHNEMTVPLTPAAAREVDVVGVFRY-RNTWPLCLEFLRSGKIDVKPLI  333 (364)
T ss_pred             CCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCCCCcccHHHHHhCccEEEEeccC-hHHHHHHHHHHHcCCCCchHhe
Confidence            999999999654789999999999999999865443334455667788899887754 35788899999999886  345


Q ss_pred             -EEeec--ccHHHHHHHHHcCCccEEEEEe
Q 018382          323 -EVIKM--DYVNKAFERLEKNDVRYRFVVD  349 (357)
Q Consensus       323 -~~~~~--~~~~~a~~~~~~~~~~Gkvvi~  349 (357)
                       ++|++  +++++|++.+++++..+|+++.
T Consensus       334 ~~~~~l~~~~~~~a~~~~~~~~~~~kvv~~  363 (364)
T PLN02702        334 THRFGFSQKEVEEAFETSARGGNAIKVMFN  363 (364)
T ss_pred             EEEeccChHHHHHHHHHHhcCCCceEEEEe
Confidence             78665  7999999999998888999985

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=7.8e-39  Score=295.93  Aligned_cols=330  Identities=25%  Similarity=0.333  Sum_probs=276.6

Q ss_pred             eeehcc--CCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCC-CCCCCCccCccccEEEEEeCCCCCCCCC
Q 018382           11 IGWAAK--DPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLG-MSNYPMVPGHEVVGEVKEVGSEVSNFKV   87 (357)
Q Consensus        11 ~~~~~~--~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~-~~~~p~~lG~e~~G~V~~vG~~v~~~~~   87 (357)
                      +++...  +.+..+.+.+.+.|.+.+++|+|++.++++|++|++++.|..+ ...+|.++|||++|+|+.+|++++.|++
T Consensus         2 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~~   81 (342)
T cd08266           2 KAVVIRGHGGPEVLEYGDLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGIKLPLPHILGSDGAGVVEAVGPGVTNVKP   81 (342)
T ss_pred             eEEEEecCCCccceeEeecCCCCCCCCeEEEEEEeeecCHHHHHHhcCCCCCCCCCCeecccceEEEEEEeCCCCCCCCC
Confidence            455443  2345677778888889999999999999999999999887653 2345778999999999999999999999


Q ss_pred             CCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhh
Q 018382           88 GDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVT  167 (357)
Q Consensus        88 Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~t  167 (357)
                      ||+|++.+.. .||.|.+|..+.++.|++..+       .|....|++++|+.++.+.++++|+++++++++++++.+.+
T Consensus        82 Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~-------~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~~  153 (342)
T cd08266          82 GQRVVIYPGI-SCGRCEYCLAGRENLCAQYGI-------LGEHVDGGYAEYVAVPARNLLPIPDNLSFEEAAAAPLTFLT  153 (342)
T ss_pred             CCEEEEcccc-ccccchhhccccccccccccc-------cccccCcceeEEEEechHHceeCCCCCCHHHHHhhhhHHHH
Confidence            9999766444 599999999999999997533       23346799999999999999999999999999999999999


Q ss_pred             hhhhhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHh---h-
Q 018382          168 VFSPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEA---A-  242 (357)
Q Consensus       168 a~~~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~---~-  242 (357)
                      ||.++.....+.++++++|+|+ +.+|++++++++..|++|+++++++++.+.+.+ ++.+.+++..+.+....+   . 
T Consensus       154 a~~~l~~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  232 (342)
T cd08266         154 AWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAKE-LGADYVIDYRKEDFVREVRELTG  232 (342)
T ss_pred             HHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cCCCeEEecCChHHHHHHHHHhC
Confidence            9999877777789999999987 799999999999999999999999888888866 888888876654433332   2 


Q ss_pred             -CCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCC-cccchHHHhhccceEEEEeecCHHHHHHHHHHHHhcCCCc
Q 018382          243 -DSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTP-MQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTS  320 (357)
Q Consensus       243 -~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~  320 (357)
                       .++|++++++|.. .+...+++++++|+++.++..... ..+.....+.++.++.+........+..+++++.++.+.+
T Consensus       233 ~~~~d~~i~~~g~~-~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~  311 (342)
T cd08266         233 KRGVDVVVEHVGAA-TWEKSLKSLARGGRLVTCGATTGYEAPIDLRHVFWRQLSILGSTMGTKAELDEALRLVFRGKLKP  311 (342)
T ss_pred             CCCCcEEEECCcHH-HHHHHHHHhhcCCEEEEEecCCCCCCCcCHHHHhhcceEEEEEecCCHHHHHHHHHHHHcCCccc
Confidence             2799999999987 788999999999999999866442 2334434567888999988877888999999999999887


Q ss_pred             cE-EEeecccHHHHHHHHHcCCccEEEEEec
Q 018382          321 MI-EVIKMDYVNKAFERLEKNDVRYRFVVDV  350 (357)
Q Consensus       321 ~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~  350 (357)
                      .+ +.|+++++++|++.+.+++..||+++++
T Consensus       312 ~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~  342 (342)
T cd08266         312 VIDSVFPLEEAAEAHRRLESREQFGKIVLTP  342 (342)
T ss_pred             ceeeeEcHHHHHHHHHHHHhCCCCceEEEeC
Confidence            66 8999999999999999888889999863

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>cd08232 idonate-5-DH L-idonate 5-dehydrogenase

Probab=100.00  E-value=7.8e-39  Score=296.28  Aligned_cols=325  Identities=24%  Similarity=0.363  Sum_probs=263.8

Q ss_pred             CCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHh-cCCC--CCCCCCccCccccEEEEEeCCCCCCCCCCCEEEEc
Q 018382           18 PSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIK-NDLG--MSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVG   94 (357)
Q Consensus        18 ~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~-g~~~--~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~   94 (357)
                      +.+.+.+++.++|+++++||+||+.++++|++|+..+. +..+  ...+|.++|+|++|+|+++|+++++|++||+|++.
T Consensus         5 ~~~~~~~~~~~~p~l~~~~v~I~v~~~~i~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~   84 (339)
T cd08232           5 AAGDLRVEERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEAVGPGVTGLAPGQRVAVN   84 (339)
T ss_pred             cCCceEEEEcCCCCCCCCEEEEEEEEEEECcccHHHHcCCCCCcccccCCeecCccceEEEEeeCCCCCcCCCCCEEEEc
Confidence            46788999999999999999999999999999998774 3221  12356789999999999999999999999999665


Q ss_pred             cccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhhhhhhhhc
Q 018382           95 VLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSH  174 (357)
Q Consensus        95 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~  174 (357)
                       ..+.|+.|.+|..|+.+.|....+.....+ + ...+|+|++|++++.+.++++|+++++++|+. ..++++||+++..
T Consensus        85 -~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~-~~~~g~~~~~v~v~~~~~~~iP~~~~~~~aa~-~~~~~~a~~~l~~  160 (339)
T cd08232          85 -PSRPCGTCDYCRAGRPNLCLNMRFLGSAMR-F-PHVQGGFREYLVVDASQCVPLPDGLSLRRAAL-AEPLAVALHAVNR  160 (339)
T ss_pred             -cCCcCCCChHHhCcCcccCccccceeeccc-c-CCCCCceeeEEEechHHeEECcCCCCHHHhhh-cchHHHHHHHHHh
Confidence             444699999999999999997543211000 0 12479999999999999999999999999875 5788899999988


Q ss_pred             cCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhh---CCccEEEE
Q 018382          175 FGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAA---DSLDYIID  250 (357)
Q Consensus       175 ~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~---~~~d~v~d  250 (357)
                      ...+ ++++|||.|+|.+|++++|+|+..|+ +|+++++++++.+.+++ +|++++++.++.. +....   .++|++||
T Consensus       161 ~~~~-~~~~VLI~g~g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~~~-~g~~~vi~~~~~~-~~~~~~~~~~vd~vld  237 (339)
T cd08232         161 AGDL-AGKRVLVTGAGPIGALVVAAARRAGAAEIVATDLADAPLAVARA-MGADETVNLARDP-LAAYAADKGDFDVVFE  237 (339)
T ss_pred             cCCC-CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHH-cCCCEEEcCCchh-hhhhhccCCCccEEEE
Confidence            8885 99999999889999999999999999 89999888888776666 9999999877644 22222   36999999


Q ss_pred             cCCCCCChHHHHhccccCCeEEEEccCCCCcccchHHHhhccceEEEEeecCHHHHHHHHHHHHhcCCCc--cE-EEeec
Q 018382          251 TVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTS--MI-EVIKM  327 (357)
Q Consensus       251 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~--~i-~~~~~  327 (357)
                      +.+....+...+++|+++|+++.++............++.++.++.+.... .+.++.++++++++.+++  .+ ++|++
T Consensus       238 ~~g~~~~~~~~~~~L~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~  316 (339)
T cd08232         238 ASGAPAALASALRVVRPGGTVVQVGMLGGPVPLPLNALVAKELDLRGSFRF-DDEFAEAVRLLAAGRIDVRPLITAVFPL  316 (339)
T ss_pred             CCCCHHHHHHHHHHHhcCCEEEEEecCCCCccCcHHHHhhcceEEEEEecC-HHHHHHHHHHHHcCCCCchhheeEEecH
Confidence            998644688899999999999999865433333444455677788777643 456888999999998864  35 89999


Q ss_pred             ccHHHHHHHHHcCCccEEEEEec
Q 018382          328 DYVNKAFERLEKNDVRYRFVVDV  350 (357)
Q Consensus       328 ~~~~~a~~~~~~~~~~Gkvvi~~  350 (357)
                      +++++|++.+.+++..||+++++
T Consensus       317 ~~~~~a~~~~~~~~~~gkvvv~~  339 (339)
T cd08232         317 EEAAEAFALAADRTRSVKVQLSF  339 (339)
T ss_pred             HHHHHHHHHHHhCCCceeEEEeC
Confidence            99999999999888889999863

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=100.00  E-value=2e-39  Score=298.45  Aligned_cols=288  Identities=20%  Similarity=0.215  Sum_probs=237.4

Q ss_pred             cCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCCCCEEEEcc
Q 018382           16 KDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVGV   95 (357)
Q Consensus        16 ~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~~   95 (357)
                      ..++..+++.+++.|+|++|||||||.++++|+.+.   .|..+....|.++|.|++|+|+++|+   .|++||||+.. 
T Consensus        13 ~~~~~~l~~~~~~~p~~~~~evlv~v~a~~~n~~~~---~g~~~~~~~~~i~G~~~~g~v~~~~~---~~~~GdrV~~~-   85 (325)
T TIGR02825        13 YPTDSDFELKTVELPPLNNGEVLLEALFLSVDPYMR---VAAKRLKEGDTMMGQQVARVVESKNV---ALPKGTIVLAS-   85 (325)
T ss_pred             CCCCCceEEEeccCCCCCCCcEEEEEEEEecCHHHh---cccCcCCCCCcEecceEEEEEEeCCC---CCCCCCEEEEe-
Confidence            334567888899999999999999999999999654   34333334567999999999999874   59999999632 


Q ss_pred             ccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEEC----CCCCCcccc-ccccchhhhhhh
Q 018382           96 LVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKI----PDGMALEQA-APLLCAGVTVFS  170 (357)
Q Consensus        96 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~l----P~~l~~~~a-a~~~~~~~ta~~  170 (357)
                                                           ++|++|++++.+.+.++    |++++++++ +++++++.|||+
T Consensus        86 -------------------------------------~~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~~~~~TA~~  128 (325)
T TIGR02825        86 -------------------------------------PGWTSHSISDGKDLEKLLTEWPDTLPLSLALGTVGMPGLTAYF  128 (325)
T ss_pred             -------------------------------------cCceeeEEechhheEEccccccCCCCHHHHHHhcccHHHHHHH
Confidence                                                 36899999999988887    999999997 689999999999


Q ss_pred             hhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCCh-hH---HHHhh-CC
Q 018382          171 PLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDA-TR---MQEAA-DS  244 (357)
Q Consensus       171 ~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~-~~---~~~~~-~~  244 (357)
                      ++.....+++|++|||+|+ |++|++++|+|+..|++|+++++++++.+.+++ +|+++++++++. ..   ++... ++
T Consensus       129 ~l~~~~~~~~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~~~-lGa~~vi~~~~~~~~~~~~~~~~~~g  207 (325)
T TIGR02825       129 GLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYLKK-LGFDVAFNYKTVKSLEETLKKASPDG  207 (325)
T ss_pred             HHHHHhCCCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cCCCEEEeccccccHHHHHHHhCCCC
Confidence            9877777799999999986 999999999999999999999999999988877 999999988763 22   22333 37


Q ss_pred             ccEEEEcCCCCCChHHHHhccccCCeEEEEccCCC-----Ccc--cchHHHhhccceEEEEeecC------HHHHHHHHH
Q 018382          245 LDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINT-----PMQ--FLTPMVMLGRKAITGSFIGS------MKETKEMLE  311 (357)
Q Consensus       245 ~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-----~~~--~~~~~~~~~~~~i~g~~~~~------~~~~~~~~~  311 (357)
                      +|++||++|+. .+..++++++++|+++.+|....     ...  .....++.+.+++.++....      .+.++++++
T Consensus       208 vdvv~d~~G~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  286 (325)
T TIGR02825       208 YDCYFDNVGGE-FSNTVIGQMKKFGRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEGFIVNRWQGEVRQKALKELLK  286 (325)
T ss_pred             eEEEEECCCHH-HHHHHHHHhCcCcEEEEecchhhcccCCCCCCCcchHHHhhhcceEeEEEehhhhhhhhHHHHHHHHH
Confidence            99999999987 78999999999999999986432     111  12334566788888876432      246788999


Q ss_pred             HHHhcCCCccE-EEeecccHHHHHHHHHcCCccEEEEEe
Q 018382          312 FCREKGVTSMI-EVIKMDYVNKAFERLEKNDVRYRFVVD  349 (357)
Q Consensus       312 ~~~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~  349 (357)
                      ++.++.+++.+ .+|+++++.+|++.+++++..||+|+.
T Consensus       287 l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~gkvVv~  325 (325)
T TIGR02825       287 WVLEGKIQYKEYVIEGFENMPAAFMGMLKGENLGKTIVK  325 (325)
T ss_pred             HHHCCCcccceeccccHHHHHHHHHHHhcCCCCCeEEeC
Confidence            99999999876 889999999999999999999999873

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>cd08293 PTGR2 Prostaglandin reductase

Probab=100.00  E-value=4.7e-39  Score=298.44  Aligned_cols=293  Identities=16%  Similarity=0.160  Sum_probs=229.0

Q ss_pred             CCcceeeeecCCCC-CCcEEEEEeeeccccchHHHHhcCC---CCCCCCCccCccccEEEEEeCCCCCCCCCCCEEEEcc
Q 018382           20 GILSPYTYTLRNTG-AEDVYIKVLYCGICHTDIHQIKNDL---GMSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVGV   95 (357)
Q Consensus        20 ~~~~~~~~~~p~~~-~~evlV~v~~~~~~~~D~~~~~g~~---~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~~   95 (357)
                      +.+++.+++.|+|. ++||||||+++++||.|+.......   ....+|.++|+|++|+|+++|+++++|++||+|+.. 
T Consensus        21 ~~~~~~~~~~p~~~~~~evlV~v~a~gin~~d~~~~~~~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~-   99 (345)
T cd08293          21 ENFRVEECTLPDELNEGQVLVRTLYLSVDPYMRCRMNEDTGTDYLAPWQLSQVLDGGGVGVVEESKHQKFAVGDIVTSF-   99 (345)
T ss_pred             cceEEEeccCCCCCCCCeEEEEEEEEecCHHHHhhcccccccccCCCccCCCceEeeEEEEEeccCCCCCCCCCEEEec-
Confidence            45778899999874 9999999999999999964332111   113467789999999999999999999999999632 


Q ss_pred             ccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccc----cccccchhhhhhhh
Q 018382           96 LVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQ----AAPLLCAGVTVFSP  171 (357)
Q Consensus        96 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~----aa~~~~~~~ta~~~  171 (357)
                                                          .++|+||++++++.++++|+++++++    +++++.++.|||++
T Consensus       100 ------------------------------------~~~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a~~~~~~~ta~~a  143 (345)
T cd08293         100 ------------------------------------NWPWQTYAVLDGSSLEKVDPQLVDGHLSYFLGAVGLPGLTALIG  143 (345)
T ss_pred             ------------------------------------CCCceeEEEecHHHeEEcCccccccchhHHhhhcCcHHHHHHHH
Confidence                                                15699999999999999999865433    45678889999999


Q ss_pred             hhccCCCCCC--CeEEEEec-ChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHH---Hhh-C
Q 018382          172 LSHFGLKQSG--LRGGILGL-GGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQ---EAA-D  243 (357)
Q Consensus       172 l~~~~~~~~~--~~VlI~G~-g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~---~~~-~  243 (357)
                      +.....++++  ++|||+|+ |++|++++|+|+..|+ +|+++++++++.+.+++++|+++++++++.+..+   ++. +
T Consensus       144 l~~~~~~~~g~~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~~~~  223 (345)
T cd08293         144 IQEKGHITPGANQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKTDNVAERLRELCPE  223 (345)
T ss_pred             HHHhccCCCCCCCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHCCC
Confidence            9777766776  99999987 9999999999999999 8999999999888887779999999887654433   333 3


Q ss_pred             CccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCC---cc----cch--HHH-hhccceEEEEeecC-----HHHHHH
Q 018382          244 SLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTP---MQ----FLT--PMV-MLGRKAITGSFIGS-----MKETKE  308 (357)
Q Consensus       244 ~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~---~~----~~~--~~~-~~~~~~i~g~~~~~-----~~~~~~  308 (357)
                      ++|++||++|+. .+..++++++++|+++.+|.....   ..    +..  ..+ ..+..+........     .+.+++
T Consensus       224 gvd~vid~~g~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  302 (345)
T cd08293         224 GVDVYFDNVGGE-ISDTVISQMNENSHIILCGQISQYNKDVPYPPPLPEATEAILKERNITRERFLVLNYKDKFEEAIAQ  302 (345)
T ss_pred             CceEEEECCCcH-HHHHHHHHhccCCEEEEEeeeecccCccCccccccchhHHHhhhcceEEEEEEeeccHhHHHHHHHH
Confidence            799999999987 688999999999999999853211   11    110  111 12333332222111     134677


Q ss_pred             HHHHHHhcCCCccE-EEeecccHHHHHHHHHcCCccEEEEEec
Q 018382          309 MLEFCREKGVTSMI-EVIKMDYVNKAFERLEKNDVRYRFVVDV  350 (357)
Q Consensus       309 ~~~~~~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~  350 (357)
                      ++++++++.+++.+ ..++++++++|++.+++++..||+++++
T Consensus       303 ~~~l~~~g~i~~~~~~~~~l~~~~~A~~~~~~~~~~gkvvl~~  345 (345)
T cd08293         303 LSQWVKEGKLKVKETVYEGLENAGEAFQSMMNGGNIGKQIVKV  345 (345)
T ss_pred             HHHHHHCCCccceeEEeecHHHHHHHHHHHhcCCCCCeEEEEC
Confidence            88899999998766 6679999999999999999899999874

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=6.2e-39  Score=298.19  Aligned_cols=311  Identities=21%  Similarity=0.297  Sum_probs=253.5

Q ss_pred             CCcceee-eecCCCCCCcEEEEEeeeccccchHHHHhcCCC--------------------CCCCCCccCccccEEEEEe
Q 018382           20 GILSPYT-YTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLG--------------------MSNYPMVPGHEVVGEVKEV   78 (357)
Q Consensus        20 ~~~~~~~-~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~--------------------~~~~p~~lG~e~~G~V~~v   78 (357)
                      ..+.+.+ .+.|+|.+++|+||+.++++|++|++++.|.++                    ...+|.++|||++|+|+++
T Consensus        13 ~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e~~G~V~~v   92 (350)
T cd08274          13 DKLVYRDDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPRIQGADIVGRVVAV   92 (350)
T ss_pred             cceeecccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCccccccccccccccccccCCCCCCcccCCcceEEEEEe
Confidence            3455543 577888999999999999999999998877543                    2346789999999999999


Q ss_pred             CCCCCCCCCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCcccc
Q 018382           79 GSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQA  158 (357)
Q Consensus        79 G~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~a  158 (357)
                      |+++++|++||+|++.+.. .|+.|..|..     |..          .|...+|++++|+.++...++++|++++++++
T Consensus        93 G~~v~~~~~Gd~V~~~~~~-~~~~~~~~~~-----~~~----------~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~  156 (350)
T cd08274          93 GEGVDTARIGERVLVDPSI-RDPPEDDPAD-----IDY----------IGSERDGGFAEYTVVPAENAYPVNSPLSDVEL  156 (350)
T ss_pred             CCCCCCCCCCCEEEEecCc-CCCCcccccc-----ccc----------cCCCCCccceEEEEecHHHceeCCCCCCHHHH
Confidence            9999999999999765433 4666655421     110          12224699999999999999999999999999


Q ss_pred             ccccchhhhhhhhhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhH
Q 018382          159 APLLCAGVTVFSPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATR  237 (357)
Q Consensus       159 a~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~  237 (357)
                      +++++.+.|||.++. ...++++++|||+|+ |++|++++++|+..|++|+++++++ +.+.+++ +|++.+++......
T Consensus       157 a~l~~~~~ta~~~~~-~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~vi~~~~~~-~~~~~~~-~g~~~~~~~~~~~~  233 (350)
T cd08274         157 ATFPCSYSTAENMLE-RAGVGAGETVLVTGASGGVGSALVQLAKRRGAIVIAVAGAA-KEEAVRA-LGADTVILRDAPLL  233 (350)
T ss_pred             HhcccHHHHHHHHHh-hcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCch-hhHHHHh-cCCeEEEeCCCccH
Confidence            999999999999984 455699999999997 9999999999999999999988765 7777765 99876665543322


Q ss_pred             HH-Hhh--CCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCC-cccchHHHhhccceEEEEeecCHHHHHHHHHHH
Q 018382          238 MQ-EAA--DSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTP-MQFLTPMVMLGRKAITGSFIGSMKETKEMLEFC  313 (357)
Q Consensus       238 ~~-~~~--~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~  313 (357)
                      .+ ...  .++|++||++++. .+..++++++++|+++.+|..... ..++...++.++.++.++.....+.+.++++++
T Consensus       234 ~~~~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  312 (350)
T cd08274         234 ADAKALGGEPVDVVADVVGGP-LFPDLLRLLRPGGRYVTAGAIAGPVVELDLRTLYLKDLTLFGSTLGTREVFRRLVRYI  312 (350)
T ss_pred             HHHHhhCCCCCcEEEecCCHH-HHHHHHHHhccCCEEEEecccCCccccCCHHHhhhcceEEEEeecCCHHHHHHHHHHH
Confidence            11 122  3799999999987 889999999999999999865443 345666667889999999888788899999999


Q ss_pred             HhcCCCccE-EEeecccHHHHHHHHHcCCccEEEEEec
Q 018382          314 REKGVTSMI-EVIKMDYVNKAFERLEKNDVRYRFVVDV  350 (357)
Q Consensus       314 ~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~  350 (357)
                      .++.+++.+ ++|+++++++|++.+.+++..||+++++
T Consensus       313 ~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvi~~  350 (350)
T cd08274         313 EEGEIRPVVAKTFPLSEIREAQAEFLEKRHVGKLVLVP  350 (350)
T ss_pred             HCCCcccccccccCHHHHHHHHHHHhcCCCceEEEEeC
Confidence            999998766 8999999999999999988889999863

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=6.3e-39  Score=301.43  Aligned_cols=317  Identities=23%  Similarity=0.375  Sum_probs=256.7

Q ss_pred             CcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCC------C-CCCCCCccCccccEEEEEeCCCCCCCCCCCEEEE
Q 018382           21 ILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDL------G-MSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGV   93 (357)
Q Consensus        21 ~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~------~-~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~   93 (357)
                      .+++++++.|+++++||+||+.++++|++|++.+.+..      + ...+|.++|||++|+|+++|++++.|++||+|++
T Consensus        38 ~~~~~~~~~p~~~~~ev~V~v~a~gi~~~D~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~  117 (384)
T cd08265          38 ELRVEDVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGVVEKTGKNVKNFEKGDPVTA  117 (384)
T ss_pred             CEEEEECCCCCCCCCEEEEEEEEEEEcHhHHHHHcCCCCcccccCcccCCCcccccceEEEEEEECCCCCCCCCCCEEEE
Confidence            58889999999999999999999999999999886321      1 1345789999999999999999999999999977


Q ss_pred             ccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCC-------Cccccccccchhh
Q 018382           94 GVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGM-------ALEQAAPLLCAGV  166 (357)
Q Consensus        94 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l-------~~~~aa~~~~~~~  166 (357)
                      .+.. .|+.|..|..+.++.|..+...       |...+|+|++|+.++++.++++|+++       +.+ +++++.+++
T Consensus       118 ~~~~-~~~~~~~c~~~~~~~~~~~~~~-------g~~~~g~~~~~v~v~~~~~~~lP~~~~~~~~~~~~~-~a~~~~~~~  188 (384)
T cd08265         118 EEMM-WCGMCRACRSGSPNHCKNLKEL-------GFSADGAFAEYIAVNARYAWEINELREIYSEDKAFE-AGALVEPTS  188 (384)
T ss_pred             CCCC-CCCCChhhhCcCcccCCCccee-------eecCCCcceeeEEechHHeEECCccccccccCCCHH-HhhhhhHHH
Confidence            6654 6999999999999999864422       22347999999999999999999864       444 666778889


Q ss_pred             hhhhhhhcc-CCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCcEEEcCCCh---hH---H
Q 018382          167 TVFSPLSHF-GLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGADQYLVSSDA---TR---M  238 (357)
Q Consensus       167 ta~~~l~~~-~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~---~~---~  238 (357)
                      +||+++... ..+++|++|||+|+|++|++++|+|+..|+ +|+++++++++.+.+++ +|++++++.++.   ++   +
T Consensus       189 ta~~al~~~~~~~~~g~~VlV~g~g~vG~~ai~lA~~~G~~~vi~~~~~~~~~~~~~~-~g~~~~v~~~~~~~~~~~~~v  267 (384)
T cd08265         189 VAYNGLFIRGGGFRPGAYVVVYGAGPIGLAAIALAKAAGASKVIAFEISEERRNLAKE-MGADYVFNPTKMRDCLSGEKV  267 (384)
T ss_pred             HHHHHHHhhcCCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH-cCCCEEEcccccccccHHHHH
Confidence            999998654 567999999999889999999999999999 79999888887766666 999999887632   22   2


Q ss_pred             HHhhC--CccEEEEcCCCC-CChHHHHhccccCCeEEEEccCCCCcccchHHHhhccceEEEEeec-CHHHHHHHHHHHH
Q 018382          239 QEAAD--SLDYIIDTVPAN-HPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIG-SMKETKEMLEFCR  314 (357)
Q Consensus       239 ~~~~~--~~d~v~d~~g~~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~-~~~~~~~~~~~~~  314 (357)
                      .++..  ++|+|+|+.|.. ..+..++++++++|+++.+|.......+....+..+..++.+.... ....+.++++++.
T Consensus       268 ~~~~~g~gvDvvld~~g~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ll~  347 (384)
T cd08265         268 MEVTKGWGADIQVEAAGAPPATIPQMEKSIAINGKIVYIGRAATTVPLHLEVLQVRRAQIVGAQGHSGHGIFPSVIKLMA  347 (384)
T ss_pred             HHhcCCCCCCEEEECCCCcHHHHHHHHHHHHcCCEEEEECCCCCCCcccHHHHhhCceEEEEeeccCCcchHHHHHHHHH
Confidence            33332  799999999863 2567889999999999999865444444445566677788887643 2346889999999


Q ss_pred             hcCCCcc--E-EEeecccHHHHHHHHHcCCccEEEEE
Q 018382          315 EKGVTSM--I-EVIKMDYVNKAFERLEKNDVRYRFVV  348 (357)
Q Consensus       315 ~~~l~~~--i-~~~~~~~~~~a~~~~~~~~~~Gkvvi  348 (357)
                      ++.+++.  + ++|+++++++|++.++++ ..||+++
T Consensus       348 ~g~l~~~~~~~~~~~~~~~~~a~~~~~~~-~~~kvvv  383 (384)
T cd08265         348 SGKIDMTKIITARFPLEGIMEAIKAASER-TDGKITI  383 (384)
T ss_pred             cCCCChHHheEEEeeHHHHHHHHHHHhcC-CCceEEe
Confidence            9999862  4 899999999999997665 5688875

This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi

>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases

Probab=100.00  E-value=8.8e-39  Score=296.39  Aligned_cols=325  Identities=25%  Similarity=0.408  Sum_probs=267.8

Q ss_pred             eeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCCCC
Q 018382           10 TIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGD   89 (357)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd   89 (357)
                      |++++... .+.+.+++.++|+++++||+||+.++++|++|+..+.+.+. ...|.++|+|++|+|+.+|++++.|++||
T Consensus         1 ~~a~~~~~-~~~l~~~~~~~~~l~~~~v~v~v~~~~~n~~d~~~~~~~~~-~~~~~~~g~~~~G~V~~~g~~v~~~~~Gd   78 (343)
T cd08236           1 MKALVLTG-PGDLRYEDIPKPEPGPGEVLVKVKACGICGSDIPRYLGTGA-YHPPLVLGHEFSGTVEEVGSGVDDLAVGD   78 (343)
T ss_pred             CeeEEEec-CCceeEEecCCCCCCCCeEEEEEEEEEECccchHhhcCCCC-CCCCcccCcceEEEEEEECCCCCcCCCCC
Confidence            35666653 35688899999999999999999999999999998877652 34567899999999999999999999999


Q ss_pred             EEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhhhh
Q 018382           90 KVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVF  169 (357)
Q Consensus        90 ~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~  169 (357)
                      +|+..+.. .|+.|..|..++++.|+...+.       |....|+|++|+.++.+.++++|+++++++++++ ..+++||
T Consensus        79 ~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~ta~  149 (343)
T cd08236          79 RVAVNPLL-PCGKCEYCKKGEYSLCSNYDYI-------GSRRDGAFAEYVSVPARNLIKIPDHVDYEEAAMI-EPAAVAL  149 (343)
T ss_pred             EEEEcCCC-CCCCChhHHCcChhhCCCcceE-------ecccCCcccceEEechHHeEECcCCCCHHHHHhc-chHHHHH
Confidence            99776555 5899999999999999875432       3346799999999999999999999999999887 5778999


Q ss_pred             hhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCe-EEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHH---hhC--
Q 018382          170 SPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHH-VTVISSSDKKRVEAMEHLGADQYLVSSDATRMQE---AAD--  243 (357)
Q Consensus       170 ~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~-V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~---~~~--  243 (357)
                      .++. ...++++++|+|+|+|.+|.+++|+|+..|++ |+++++++++.+.+.+ +|++++++.++.. .++   ...  
T Consensus       150 ~~l~-~~~~~~~~~vlI~g~g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l~~-~g~~~~~~~~~~~-~~~~~~~~~~~  226 (343)
T cd08236         150 HAVR-LAGITLGDTVVVIGAGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVARE-LGADDTINPKEED-VEKVRELTEGR  226 (343)
T ss_pred             HHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH-cCCCEEecCcccc-HHHHHHHhCCC
Confidence            9987 44568999999998899999999999999997 9999988888887766 9999998877644 333   222  


Q ss_pred             CccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCcc---cchHHHhhccceEEEEeecC-----HHHHHHHHHHHHh
Q 018382          244 SLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQ---FLTPMVMLGRKAITGSFIGS-----MKETKEMLEFCRE  315 (357)
Q Consensus       244 ~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~---~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~~~~~  315 (357)
                      ++|++|||.|....+..++++|+++|+++.+|.......   .....++.++.++.++....     .+.++++.+++.+
T Consensus       227 ~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  306 (343)
T cd08236         227 GADLVIEAAGSPATIEQALALARPGGKVVLVGIPYGDVTLSEEAFEKILRKELTIQGSWNSYSAPFPGDEWRTALDLLAS  306 (343)
T ss_pred             CCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcccCCCcccccCCHHHHHhcCcEEEEEeeccccccchhhHHHHHHHHHc
Confidence            599999999875577889999999999999986544321   23334557788888877644     4678889999999


Q ss_pred             cCCC--ccE-EEeecccHHHHHHHHHc-CCccEEEEE
Q 018382          316 KGVT--SMI-EVIKMDYVNKAFERLEK-NDVRYRFVV  348 (357)
Q Consensus       316 ~~l~--~~i-~~~~~~~~~~a~~~~~~-~~~~Gkvvi  348 (357)
                      +.+.  +.+ +++++++++++++.+++ +...||+|+
T Consensus       307 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~v~  343 (343)
T cd08236         307 GKIKVEPLITHRLPLEDGPAAFERLADREEFSGKVLL  343 (343)
T ss_pred             CCCChHHheeeeecHHHHHHHHHHHHcCCCCeeEEeC
Confidence            9886  345 89999999999999998 667788874

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=100.00  E-value=4e-39  Score=296.90  Aligned_cols=296  Identities=21%  Similarity=0.223  Sum_probs=240.0

Q ss_pred             heeeehccC----CC--CCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCC
Q 018382            9 ATIGWAAKD----PS--GILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEV   82 (357)
Q Consensus         9 ~~~~~~~~~----~~--~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v   82 (357)
                      +|++|....    ++  ..+++++++.|+|+++|||||++++++||.|.+...+   ...+|.++|+|++|+|++   .+
T Consensus         2 ~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~a~~in~~~~~~~~~---~~~~p~v~G~e~~G~V~~---~~   75 (329)
T cd08294           2 KAKTWVLKKHFDGKPKESDFELVEEELPPLKDGEVLCEALFLSVDPYMRPYSKR---LNEGDTMIGTQVAKVIES---KN   75 (329)
T ss_pred             CceEEEEecCCCCCCCccceEEEecCCCCCCCCcEEEEEEEEecCHHHhccccc---CCCCCcEecceEEEEEec---CC
Confidence            567777654    22  4578889999999999999999999999987653221   124678999999999985   45


Q ss_pred             CCCCCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCc---ceEECCCCCC--c--
Q 018382           83 SNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQK---FVVKIPDGMA--L--  155 (357)
Q Consensus        83 ~~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~---~~~~lP~~l~--~--  155 (357)
                      ++|++||||+.                                      .+++++|++++.+   .++++|++++  +  
T Consensus        76 ~~~~~Gd~V~~--------------------------------------~~~~~~~~~~~~~~~~~~~~iP~~~~~~~~~  117 (329)
T cd08294          76 SKFPVGTIVVA--------------------------------------SFGWRTHTVSDGKDQPDLYKLPADLPDDLPP  117 (329)
T ss_pred             CCCCCCCEEEe--------------------------------------eCCeeeEEEECCccccceEECCccccccCCh
Confidence            67999999963                                      2468899999999   9999999998  2  


Q ss_pred             -cccccccchhhhhhhhhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCC
Q 018382          156 -EQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSS  233 (357)
Q Consensus       156 -~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~  233 (357)
                       ..++++++.++|||+++.....+++|++|||+|+ |++|++++|+|+..|++|+++++++++.+.+++ +|++++++++
T Consensus       118 ~~~~a~~~~~~~ta~~al~~~~~~~~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~-~Ga~~vi~~~  196 (329)
T cd08294         118 SLALGVLGMPGLTAYFGLLEICKPKAGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKE-LGFDAVFNYK  196 (329)
T ss_pred             HHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cCCCEEEeCC
Confidence             2334688899999999987777799999999985 999999999999999999999999999988888 9999999988


Q ss_pred             ChhHHHHh---h-CCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCC--c-----ccchHHHhhccceEEEEeecC
Q 018382          234 DATRMQEA---A-DSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTP--M-----QFLTPMVMLGRKAITGSFIGS  302 (357)
Q Consensus       234 ~~~~~~~~---~-~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~-----~~~~~~~~~~~~~i~g~~~~~  302 (357)
                      +.+..+++   . +++|++||++|+. .+..++++++++|+++.+|.....  .     ......++.++.++.++....
T Consensus       197 ~~~~~~~v~~~~~~gvd~vld~~g~~-~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  275 (329)
T cd08294         197 TVSLEEALKEAAPDGIDCYFDNVGGE-FSSTVLSHMNDFGRVAVCGSISTYNDKEPKKGPYVQETIIFKQLKMEGFIVYR  275 (329)
T ss_pred             CccHHHHHHHHCCCCcEEEEECCCHH-HHHHHHHhhccCCEEEEEcchhccCCCCCCcCcccHHHHhhhcceEEEEEhhh
Confidence            75544333   2 3799999999986 889999999999999998753211  0     112334567788888876543


Q ss_pred             H-----HHHHHHHHHHHhcCCCccE-EEeecccHHHHHHHHHcCCccEEEEEec
Q 018382          303 M-----KETKEMLEFCREKGVTSMI-EVIKMDYVNKAFERLEKNDVRYRFVVDV  350 (357)
Q Consensus       303 ~-----~~~~~~~~~~~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~  350 (357)
                      .     +.+++++++++++.+++.. .+|+++++++|++.+++++..||+++++
T Consensus       276 ~~~~~~~~~~~~~~l~~~g~i~~~~~~~~~l~~~~~A~~~~~~~~~~gkvvv~~  329 (329)
T cd08294         276 WQDRWPEALKQLLKWIKEGKLKYREHVTEGFENMPQAFIGMLKGENTGKAIVKV  329 (329)
T ss_pred             hHHHHHHHHHHHHHHHHCCCCcCCcccccCHHHHHHHHHHHHcCCCCCeEEEeC
Confidence            2     3367788999999998865 7899999999999999999999999874

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=100.00  E-value=2.6e-39  Score=291.29  Aligned_cols=262  Identities=24%  Similarity=0.350  Sum_probs=217.2

Q ss_pred             ccCccccEEEEEeCCCCC------CCCCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEE
Q 018382           66 VPGHEVVGEVKEVGSEVS------NFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESM  139 (357)
Q Consensus        66 ~lG~e~~G~V~~vG~~v~------~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~  139 (357)
                      ++|||++|+|+++|++|+      +|++||||++.+.. .||.|..|+.|.++.|+...+.+......+...+|+|+||+
T Consensus         1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~-~cg~C~~C~~g~~~~C~~~~~~g~~~~~~~~~~~G~~aey~   79 (280)
T TIGR03366         1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTV-PCGRCFRCRRGLPQKCDSLRKYGHEALDSGWPLSGGYAEHC   79 (280)
T ss_pred             CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCCC-CCCCChhhhCcCcccCCChhhcCcccccCCccccccceeeE
Confidence            589999999999999999      89999999776544 59999999999999998755432111111223579999999


Q ss_pred             EeeCc-ceEECCCCCCccccccccchhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCe-EEEEeCCcHHH
Q 018382          140 VVDQK-FVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHH-VTVISSSDKKR  217 (357)
Q Consensus       140 ~v~~~-~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~-V~~~~~~~~~~  217 (357)
                      +++++ .++++|+++++++++.+++.+.|||+++..... .++++|||+|+|++|++++|+|+..|++ |+++++++++.
T Consensus        80 ~v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al~~~~~-~~g~~VlV~G~G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~  158 (280)
T TIGR03366        80 HLPAGTAIVPVPDDLPDAVAAPAGCATATVMAALEAAGD-LKGRRVLVVGAGMLGLTAAAAAAAAGAARVVAADPSPDRR  158 (280)
T ss_pred             EecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHHHhccC-CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHH
Confidence            99997 799999999999999999999999999987766 6999999999999999999999999996 88888888888


Q ss_pred             HHHHHhcCCcEEEcCCCh-hHHHHhh--CCccEEEEcCCCCCChHHHHhccccCCeEEEEccCC--CCcccchHHHhhcc
Q 018382          218 VEAMEHLGADQYLVSSDA-TRMQEAA--DSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVIN--TPMQFLTPMVMLGR  292 (357)
Q Consensus       218 ~~~~~~~g~~~vv~~~~~-~~~~~~~--~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~--~~~~~~~~~~~~~~  292 (357)
                      +.+++ +|++++++..+. +.+.++.  .++|++||++|....+..++++++++|+++.+|...  ....++...++.++
T Consensus       159 ~~a~~-~Ga~~~i~~~~~~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~i~~~~~~~~~  237 (280)
T TIGR03366       159 ELALS-FGATALAEPEVLAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVGGTAVLAGSVFPGGPVALDPEQVVRRW  237 (280)
T ss_pred             HHHHH-cCCcEecCchhhHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEeccCCCCCceeeCHHHHHhCC
Confidence            88777 999998886543 2233333  279999999998767889999999999999999753  23456777888999


Q ss_pred             ceEEEEeecCHHHHHHHHHHHHhc--CCC--ccE-EEeecccH
Q 018382          293 KAITGSFIGSMKETKEMLEFCREK--GVT--SMI-EVIKMDYV  330 (357)
Q Consensus       293 ~~i~g~~~~~~~~~~~~~~~~~~~--~l~--~~i-~~~~~~~~  330 (357)
                      +++.|+..++.++++++++++.++  .+.  +.+ ++|+++|+
T Consensus       238 ~~i~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~it~~~~l~~~  280 (280)
T TIGR03366       238 LTIRGVHNYEPRHLDQAVRFLAANGQRFPFEELVGKPFPLADV  280 (280)
T ss_pred             cEEEecCCCCHHHHHHHHHHHHhhCCCCCHHHHhhcccccccC
Confidence            999999988888999999999985  443  356 88999873

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>cd05281 TDH Threonine dehydrogenase

Probab=100.00  E-value=4.3e-38  Score=291.54  Aligned_cols=328  Identities=22%  Similarity=0.295  Sum_probs=259.9

Q ss_pred             eeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCC---CCCCCCCccCccccEEEEEeCCCCCCCC
Q 018382           10 TIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDL---GMSNYPMVPGHEVVGEVKEVGSEVSNFK   86 (357)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~---~~~~~p~~lG~e~~G~V~~vG~~v~~~~   86 (357)
                      |++|+....++.+++.+.+.|.|.++|++||+.++++|+.|+.++.+..   +....|.++|+|++|+|+.+|+++..|+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~   80 (341)
T cd05281           1 MKAIVKTKAGPGAELVEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEVGEGVTRVK   80 (341)
T ss_pred             CcceEEecCCCceEEEeCCCCCCCCCeEEEEEEEEEEcccchHHHcCCCCccccCCCCcccccceEEEEEEECCCCCCCC
Confidence            3566665445578899999999999999999999999999998865431   1233566899999999999999999999


Q ss_pred             CCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhh
Q 018382           87 VGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGV  166 (357)
Q Consensus        87 ~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~  166 (357)
                      +||+|+..+.. .||.|..|..+.++.|+..  ++++     ....|+|++|++++.+.++++|++++.+. ++++..+.
T Consensus        81 ~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~-----~~~~g~~~~~v~v~~~~~~~lP~~~~~~~-a~~~~~~~  151 (341)
T cd05281          81 VGDYVSAETHI-VCGKCYQCRTGNYHVCQNT--KILG-----VDTDGCFAEYVVVPEENLWKNDKDIPPEI-ASIQEPLG  151 (341)
T ss_pred             CCCEEEECCcc-CCCCChHHHCcCcccCccc--ceEe-----ccCCCcceEEEEechHHcEECcCCCCHHH-hhhhhHHH
Confidence            99999776544 6999999999999999742  3332     23579999999999999999999999854 46777778


Q ss_pred             hhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCcEEEcCCChhH--HHHhh-
Q 018382          167 TVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGADQYLVSSDATR--MQEAA-  242 (357)
Q Consensus       167 ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~--~~~~~-  242 (357)
                      ++++++. . ..+++++|||.|+|.+|++++|+|+..|+ +|+++++++++.+.+++ +|++++++.+..+.  +.+.. 
T Consensus       152 ~a~~~~~-~-~~~~g~~vlV~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~  228 (341)
T cd05281         152 NAVHTVL-A-GDVSGKSVLITGCGPIGLMAIAVAKAAGASLVIASDPNPYRLELAKK-MGADVVINPREEDVVEVKSVTD  228 (341)
T ss_pred             HHHHHHH-h-cCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHH-hCcceeeCcccccHHHHHHHcC
Confidence            8888765 2 33789999998889999999999999999 78888777777776666 99998887665433  22222 


Q ss_pred             -CCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCcccchH-HHhhccceEEEEeecC-HHHHHHHHHHHHhcCCC
Q 018382          243 -DSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTP-MVMLGRKAITGSFIGS-MKETKEMLEFCREKGVT  319 (357)
Q Consensus       243 -~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~~~~~i~g~~~~~-~~~~~~~~~~~~~~~l~  319 (357)
                       +++|++||++|.......++++++++|+++.++.......+... ....++.++.+..... .+.+..+++++.++.+.
T Consensus       229 ~~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~  308 (341)
T cd05281         229 GTGVDVVLEMSGNPKAIEQGLKALTPGGRVSILGLPPGPVDIDLNNLVIFKGLTVQGITGRKMFETWYQVSALLKSGKVD  308 (341)
T ss_pred             CCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEccCCCCcccccchhhhccceEEEEEecCCcchhHHHHHHHHHcCCCC
Confidence             27999999998765778899999999999999865443333322 3556777777665322 35678899999999886


Q ss_pred             c--cE-EEeecccHHHHHHHHHcCCccEEEEEec
Q 018382          320 S--MI-EVIKMDYVNKAFERLEKNDVRYRFVVDV  350 (357)
Q Consensus       320 ~--~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~  350 (357)
                      +  .+ +.++++++++||+.+++++ .||++++.
T Consensus       309 ~~~~~~~~~~~~~~~~a~~~~~~~~-~gk~vv~~  341 (341)
T cd05281         309 LSPVITHKLPLEDFEEAFELMRSGK-CGKVVLYP  341 (341)
T ss_pred             hhHheEEEecHHHHHHHHHHHhcCC-CceEEecC
Confidence            3  45 8899999999999999998 89999763

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>cd08234 threonine_DH_like L-threonine dehydrogenase

Probab=100.00  E-value=3.1e-37  Score=284.93  Aligned_cols=324  Identities=27%  Similarity=0.399  Sum_probs=266.4

Q ss_pred             eeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCCCC
Q 018382           10 TIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGD   89 (357)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd   89 (357)
                      |+++++. +++.+.+.+++.|+++++||+||++++++|+.|+....|..+. .+|.++|+|++|+|+++|+++++|++||
T Consensus         1 ~~a~~~~-~~~~~~~~~~~~~~l~~~~v~v~v~~~~l~~~d~~~~~g~~~~-~~p~~~g~~~~G~v~~vG~~v~~~~~Gd   78 (334)
T cd08234           1 MKALVYE-GPGELEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYEGEFGA-APPLVPGHEFAGVVVAVGSKVTGFKVGD   78 (334)
T ss_pred             CeeEEec-CCCceEEEeccCCCCCCCeEEEEEEEEeEchhhhHHhcCCCCC-CCCcccccceEEEEEEeCCCCCCCCCCC
Confidence            4566665 3457888999999999999999999999999999998887653 3678999999999999999999999999


Q ss_pred             EEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhhhh
Q 018382           90 KVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVF  169 (357)
Q Consensus        90 ~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~  169 (357)
                      +|++.+... |++|..|..++++.|......       |....|++++|+.++.+.++++|+++++.+++.+ ..+.+++
T Consensus        79 ~V~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~  149 (334)
T cd08234          79 RVAVDPNIY-CGECFYCRRGRPNLCENLTAV-------GVTRNGGFAEYVVVPAKQVYKIPDNLSFEEAALA-EPLSCAV  149 (334)
T ss_pred             EEEEcCCcC-CCCCccccCcChhhCCCccee-------ccCCCCcceeEEEecHHHcEECcCCCCHHHHhhh-hHHHHHH
Confidence            997755544 999999999999998865421       2235799999999999999999999999998766 7778899


Q ss_pred             hhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCe-EEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHH--Hhh-CCc
Q 018382          170 SPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHH-VTVISSSDKKRVEAMEHLGADQYLVSSDATRMQ--EAA-DSL  245 (357)
Q Consensus       170 ~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~-V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~--~~~-~~~  245 (357)
                      +++ ....++++++|||+|+|.+|.+++++|+..|++ |+++++++++.+.+++ +|++++++....+...  ... +++
T Consensus       150 ~~l-~~~~~~~g~~vlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~v  227 (334)
T cd08234         150 HGL-DLLGIKPGDSVLVFGAGPIGLLLAQLLKLNGASRVTVAEPNEEKLELAKK-LGATETVDPSREDPEAQKEDNPYGF  227 (334)
T ss_pred             HHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHH-hCCeEEecCCCCCHHHHHHhcCCCC
Confidence            888 555669999999998899999999999999997 8888888888888866 8988888776543322  112 379


Q ss_pred             cEEEEcCCCCCChHHHHhccccCCeEEEEccCCC--CcccchHHHhhccceEEEEeecCHHHHHHHHHHHHhcCCCc-c-
Q 018382          246 DYIIDTVPANHPLEPYLSLLKLDGKLILTGVINT--PMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTS-M-  321 (357)
Q Consensus       246 d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~-~-  321 (357)
                      |++||+++........+++++++|+++.+|....  ...+....++.++.++.+... ..+.++.+++++.++.+.+ . 
T Consensus       228 d~v~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~  306 (334)
T cd08234         228 DVVIEATGVPKTLEQAIEYARRGGTVLVFGVYAPDARVSISPFEIFQKELTIIGSFI-NPYTFPRAIALLESGKIDVKGL  306 (334)
T ss_pred             cEEEECCCChHHHHHHHHHHhcCCEEEEEecCCCCCCcccCHHHHHhCCcEEEEecc-CHHHHHHHHHHHHcCCCChhhh
Confidence            9999999865477889999999999999986543  233444445557788887765 3467888999999999875 2 


Q ss_pred             E-EEeecccHHHHHHHHHcCCccEEEEE
Q 018382          322 I-EVIKMDYVNKAFERLEKNDVRYRFVV  348 (357)
Q Consensus       322 i-~~~~~~~~~~a~~~~~~~~~~Gkvvi  348 (357)
                      + ++|+++++++|++.+++ +..||+++
T Consensus       307 ~~~~~~~~~~~~a~~~~~~-~~~~k~vi  333 (334)
T cd08234         307 VSHRLPLEEVPEALEGMRS-GGALKVVV  333 (334)
T ss_pred             EEEEecHHHHHHHHHHHhc-CCceEEEe
Confidence            4 88999999999999998 77899886

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein

Probab=100.00  E-value=9.7e-38  Score=288.53  Aligned_cols=297  Identities=19%  Similarity=0.254  Sum_probs=240.6

Q ss_pred             CCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCCCCEEEEccc
Q 018382           17 DPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVGVL   96 (357)
Q Consensus        17 ~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~~~   96 (357)
                      ++++.++..++|.|+|+++||+||++++++|++|+.++.|..+...+|.++|+|++|+|+++|+++++|++||+|+... 
T Consensus        12 ~~~~~~~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~-   90 (336)
T TIGR02817        12 TDPDALVDIDLPKPKPGGRDLLVEVKAISVNPVDTKVRARMAPEAGQPKILGWDAAGVVVAVGDEVTLFKPGDEVWYAG-   90 (336)
T ss_pred             CCcccceecccCCCCCCCCEEEEEEEEEEcChHHHHHHcCCCCCCCCCcccceeeEEEEEEeCCCCCCCCCCCEEEEcC-
Confidence            3456788889999999999999999999999999999888765555678999999999999999999999999996431 


Q ss_pred             cCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhhhhhhhhccC
Q 018382           97 VGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFG  176 (357)
Q Consensus        97 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~  176 (357)
                                                     +....|+|++|++++++.++++|+++++++++.+++.+.|||+++....
T Consensus        91 -------------------------------~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~  139 (336)
T TIGR02817        91 -------------------------------DIDRPGSNAEFHLVDERIVGHKPKSLSFAEAAALPLTSITAWELLFDRL  139 (336)
T ss_pred             -------------------------------CCCCCCcccceEEEcHHHcccCCCCCCHHHHhhhhHHHHHHHHHHHHhc
Confidence                                           0124699999999999999999999999999999999999999987766


Q ss_pred             CCCC-----CCeEEEEec-ChHHHHHHHHHHHc-CCeEEEEeCCcHHHHHHHHhcCCcEEEcCCCh--hHHHHhh-CCcc
Q 018382          177 LKQS-----GLRGGILGL-GGVGHMGVLIAKAM-GHHVTVISSSDKKRVEAMEHLGADQYLVSSDA--TRMQEAA-DSLD  246 (357)
Q Consensus       177 ~~~~-----~~~VlI~G~-g~~G~~ai~la~~~-g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~--~~~~~~~-~~~d  246 (357)
                      .+++     +++|||+|+ |++|++++|+|+.. |++|+++++++++.+.+++ +|+++++++...  ..+.+.. +++|
T Consensus       140 ~~~~~~~~~g~~vlV~ga~g~vg~~~~~~ak~~~G~~vi~~~~~~~~~~~l~~-~g~~~~~~~~~~~~~~i~~~~~~~vd  218 (336)
T TIGR02817       140 GINDPVAGDKRALLIIGGAGGVGSILIQLARQLTGLTVIATASRPESQEWVLE-LGAHHVIDHSKPLKAQLEKLGLEAVS  218 (336)
T ss_pred             CCCCCCCCCCCEEEEEcCCcHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHHHH-cCCCEEEECCCCHHHHHHHhcCCCCC
Confidence            6666     999999986 99999999999998 9999999999988888876 999999875441  2233333 3799


Q ss_pred             EEEEcCCCCCChHHHHhccccCCeEEEEccCCCCcccchHHHhhccceEEEEeec------C------HHHHHHHHHHHH
Q 018382          247 YIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIG------S------MKETKEMLEFCR  314 (357)
Q Consensus       247 ~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~------~------~~~~~~~~~~~~  314 (357)
                      +++|++++.......+++++++|+++.++..   ..++...+..++.++.+....      .      ...++++++++.
T Consensus       219 ~vl~~~~~~~~~~~~~~~l~~~G~~v~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  295 (336)
T TIGR02817       219 YVFSLTHTDQHFKEIVELLAPQGRFALIDDP---AELDISPFKRKSISLHWEFMFTRSMFQTADMIEQHHLLNRVARLVD  295 (336)
T ss_pred             EEEEcCCcHHHHHHHHHHhccCCEEEEEccc---ccccchhhhhcceEEEEEEeecccccchhhhhhhHHHHHHHHHHHH
Confidence            9999986644788999999999999987432   223333334444555543221      0      134688899999


Q ss_pred             hcCCCccE-EEee---cccHHHHHHHHHcCCccEEEEEe
Q 018382          315 EKGVTSMI-EVIK---MDYVNKAFERLEKNDVRYRFVVD  349 (357)
Q Consensus       315 ~~~l~~~i-~~~~---~~~~~~a~~~~~~~~~~Gkvvi~  349 (357)
                      ++.+++.+ +.|+   ++++++|++.+++++..||+++.
T Consensus       296 ~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  334 (336)
T TIGR02817       296 AGKIRTTLAETFGTINAANLKRAHALIESGKARGKIVLE  334 (336)
T ss_pred             CCCeeccchhccCCCCHHHHHHHHHHHHcCCccceEEEe
Confidence            99998765 5554   68999999999999999998874

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.

>TIGR00692 tdh L-threonine 3-dehydrogenase

Probab=100.00  E-value=3.2e-37  Score=285.56  Aligned_cols=320  Identities=24%  Similarity=0.308  Sum_probs=255.7

Q ss_pred             CCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCC---CCCCCCCccCccccEEEEEeCCCCCCCCCCCEEEEc
Q 018382           18 PSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDL---GMSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVG   94 (357)
Q Consensus        18 ~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~---~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~   94 (357)
                      ++..++++++|.|.|.++||+||+.++++|++|+.++.+..   +...+|.++|+|++|+|+++|+++++|++||+|+..
T Consensus         7 ~~~~~~l~~~~~p~~~~~ev~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~   86 (340)
T TIGR00692         7 PGYGAELTEVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKVGDYVSVE   86 (340)
T ss_pred             CCCCcEEEECCCCCCCCCeEEEEEEEEEEcccCHHHHcCCCCCCCCCCCCcccccceEEEEEEECCCCCcCCCCCEEEEC
Confidence            44568889999999999999999999999999998875531   122346689999999999999999999999999665


Q ss_pred             cccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhhhhhhhhc
Q 018382           95 VLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSH  174 (357)
Q Consensus        95 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~  174 (357)
                      ++ ..|++|..|..+....|++..+.       +....|++++|++++++.++++|++++++.+ +++..+.+|++++. 
T Consensus        87 ~~-~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a-~~~~~~~~a~~~~~-  156 (340)
T TIGR00692        87 TH-IVCGKCYACRRGQYHVCQNTKIF-------GVDTDGCFAEYAVVPAQNIWKNPKSIPPEYA-TIQEPLGNAVHTVL-  156 (340)
T ss_pred             Cc-CCCCCChhhhCcChhhCcCcceE-------eecCCCcceeEEEeehHHcEECcCCCChHhh-hhcchHHHHHHHHH-
Confidence            44 46999999999999999986432       2235799999999999999999999998654 57788888888762 


Q ss_pred             cCCCCCCCeEEEEecChHHHHHHHHHHHcCCe-EEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHH---Hhh--CCccEE
Q 018382          175 FGLKQSGLRGGILGLGGVGHMGVLIAKAMGHH-VTVISSSDKKRVEAMEHLGADQYLVSSDATRMQ---EAA--DSLDYI  248 (357)
Q Consensus       175 ~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~-V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~---~~~--~~~d~v  248 (357)
                       ...+++++|+|.|+|++|.+++|+++..|++ |+++.+++.+.+.+++ +|++++++....+..+   ++.  +++|++
T Consensus       157 -~~~~~g~~vlI~~~g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~~~-~g~~~~v~~~~~~~~~~l~~~~~~~~~d~v  234 (340)
T TIGR00692       157 -AGPISGKSVLVTGAGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAKK-MGATYVVNPFKEDVVKEVADLTDGEGVDVF  234 (340)
T ss_pred             -ccCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHH-hCCcEEEcccccCHHHHHHHhcCCCCCCEE
Confidence             3347899999988899999999999999996 8888677667666666 9998888876544333   332  379999


Q ss_pred             EEcCCCCCChHHHHhccccCCeEEEEccCCCCcccchH-HHhhccceEEEEeec-CHHHHHHHHHHHHhcCCC--ccE-E
Q 018382          249 IDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTP-MVMLGRKAITGSFIG-SMKETKEMLEFCREKGVT--SMI-E  323 (357)
Q Consensus       249 ~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~~~~~i~g~~~~-~~~~~~~~~~~~~~~~l~--~~i-~  323 (357)
                      ||+.+....+...+++++++|+++.+|.......++.. .++.++.++.+.... ..+.+.++++++.++.++  +.+ +
T Consensus       235 ld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~  314 (340)
T TIGR00692       235 LEMSGAPKALEQGLQAVTPGGRVSLLGLPPGKVTIDFTNKVIFKGLTIYGITGRHMFETWYTVSRLIQSGKLDLDPIITH  314 (340)
T ss_pred             EECCCCHHHHHHHHHhhcCCCEEEEEccCCCCcccchhhhhhhcceEEEEEecCCchhhHHHHHHHHHcCCCChHHheee
Confidence            99988755788899999999999999875433333333 456677777765532 235578889999999987  445 8


Q ss_pred             EeecccHHHHHHHHHcCCccEEEEEec
Q 018382          324 VIKMDYVNKAFERLEKNDVRYRFVVDV  350 (357)
Q Consensus       324 ~~~~~~~~~a~~~~~~~~~~Gkvvi~~  350 (357)
                      .+++++++++++.+++++. ||+++++
T Consensus       315 ~~~l~~~~~a~~~~~~~~~-gkvvv~~  340 (340)
T TIGR00692       315 KFKFDKFEKGFELMRSGQT-GKVILSL  340 (340)
T ss_pred             eeeHHHHHHHHHHHhcCCC-ceEEEeC
Confidence            9999999999999998875 9999864

E. coli His-90 modulates substrate specificity and is believed part of the active site.

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=100.00  E-value=1e-37  Score=284.34  Aligned_cols=293  Identities=26%  Similarity=0.341  Sum_probs=230.8

Q ss_pred             cceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCC----CCCCccCccccEE---EEEeC-CCCCCCCCCCEEEE
Q 018382           22 LSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMS----NYPMVPGHEVVGE---VKEVG-SEVSNFKVGDKVGV   93 (357)
Q Consensus        22 ~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~----~~p~~lG~e~~G~---V~~vG-~~v~~~~~Gd~V~~   93 (357)
                      ...++.++|.|+++|++|++.++++||.|+.+..|.++..    .+|.+++.++.|+   +...| ..+..+..||.+..
T Consensus        20 ~~~~~~~iP~~~~~~~~i~~~a~a~NpiD~~~~~g~~~~~~~~~~~p~ii~~~g~~~~~~~~~~g~~~~~~~~~g~~~~~   99 (347)
T KOG1198|consen   20 LFSEEVPIPEPEDGEVLIKVVAVALNPIDLKIRNGYYSPIPLGREFPGIIGRDGSGVVGAVESVGDDVVGGWVHGDAVVA   99 (347)
T ss_pred             EEeecccCCCCCCCceEEEEEEeccChHHHHHHccCcCCCCCccCCCCccccccCCceeEEeccccccccceEeeeEEee
Confidence            4456899999999999999999999999999999988733    3564444444444   34444 22334555665532


Q ss_pred             ccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhhhhhhhh
Q 018382           94 GVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLS  173 (357)
Q Consensus        94 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~  173 (357)
                                                         ....|+|+||++++...++++|+++++++||++|.++.|||.+|.
T Consensus       100 -----------------------------------~~~~g~~aey~v~p~~~~~~~P~~l~~~~aa~~p~~~~tA~~al~  144 (347)
T KOG1198|consen  100 -----------------------------------FLSSGGLAEYVVVPEKLLVKIPESLSFEEAAALPLAALTALSALF  144 (347)
T ss_pred             -----------------------------------ccCCCceeeEEEcchhhccCCCCccChhhhhcCchHHHHHHHHHH
Confidence                                               347899999999999999999999999999999999999999999


Q ss_pred             ccC------CCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhC---
Q 018382          174 HFG------LKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAAD---  243 (357)
Q Consensus       174 ~~~------~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~---  243 (357)
                      ...      .+++|++|||+|+ |++|++++|+|++.++..+++++++++.+++++ +|+++++|+++++.++++..   
T Consensus       145 ~~~~~~~~~~~~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l~k~-lGAd~vvdy~~~~~~e~~kk~~~  223 (347)
T KOG1198|consen  145 QLAPGKRSKKLSKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLELVKK-LGADEVVDYKDENVVELIKKYTG  223 (347)
T ss_pred             hccccccccccCCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHHHHHH-cCCcEeecCCCHHHHHHHHhhcC
Confidence            999      8899999999976 999999999999999767777778888888888 99999999999888777765   


Q ss_pred             -CccEEEEcCCCCCChHHHHhccccCCeEEEEccCCC---Ccccc-----hH-----HH-hhccceEEEEeecCHHHHHH
Q 018382          244 -SLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINT---PMQFL-----TP-----MV-MLGRKAITGSFIGSMKETKE  308 (357)
Q Consensus       244 -~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~---~~~~~-----~~-----~~-~~~~~~i~g~~~~~~~~~~~  308 (357)
                       +||+||||+|+. .......++...|+...++...+   .....     ..     .. ..+.....+......+.++.
T Consensus       224 ~~~DvVlD~vg~~-~~~~~~~~l~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  302 (347)
T KOG1198|consen  224 KGVDVVLDCVGGS-TLTKSLSCLLKGGGGAYIGLVGDELANYKLDDLWQSANGIKLYSLGLKGVNYRWLYFVPSAEYLKA  302 (347)
T ss_pred             CCccEEEECCCCC-ccccchhhhccCCceEEEEeccccccccccccchhhhhhhhheeeeeeccceeeeeecCCHHHHHH
Confidence             799999999997 67777788888776444433221   11111     00     00 11111123333345578899


Q ss_pred             HHHHHHhcCCCccE-EEeecccHHHHHHHHHcCCccEEEEEecC
Q 018382          309 MLEFCREKGVTSMI-EVIKMDYVNKAFERLEKNDVRYRFVVDVA  351 (357)
Q Consensus       309 ~~~~~~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~~  351 (357)
                      +.++++++++++.+ +.||++++.+|++.+.++...||+++.+.
T Consensus       303 l~~~ie~gkikp~i~~~~p~~~~~ea~~~~~~~~~~GK~vl~~~  346 (347)
T KOG1198|consen  303 LVELIEKGKIKPVIDSVYPFSQAKEAFEKLEKSHATGKVVLEKD  346 (347)
T ss_pred             HHHHHHcCcccCCcceeeeHHHHHHHHHHHhhcCCcceEEEEec
Confidence            99999999999998 99999999999999999999999999874

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=100.00  E-value=1.8e-37  Score=287.29  Aligned_cols=305  Identities=23%  Similarity=0.284  Sum_probs=251.6

Q ss_pred             eeeehccCCCCC---cceeeeecCCCCC-CcEEEEEeeeccccchHHHHhcCCCCC-C----CCCccCccccEEEEEeCC
Q 018382           10 TIGWAAKDPSGI---LSPYTYTLRNTGA-EDVYIKVLYCGICHTDIHQIKNDLGMS-N----YPMVPGHEVVGEVKEVGS   80 (357)
Q Consensus        10 ~~~~~~~~~~~~---~~~~~~~~p~~~~-~evlV~v~~~~~~~~D~~~~~g~~~~~-~----~p~~lG~e~~G~V~~vG~   80 (357)
                      |++|.+...+.+   +.++++|.|+|.+ +||+||+.++++|++|+..+.|..+.. .    .|.++|||++|+|+++|+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~v~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~g~e~~G~V~~vG~   80 (341)
T cd08290           1 AKALVYTEHGEPKEVLQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGNEGVGEVVKVGS   80 (341)
T ss_pred             CceEEEccCCCchhheEEeecCCCCCCCCCEEEEEEEecCCCHHHHHHhcCcCCCCCcccCCCCCCCCcceEEEEEEeCC
Confidence            456666544333   7888999999988 999999999999999999988876421 2    567899999999999999


Q ss_pred             CCCCCCCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCcccccc
Q 018382           81 EVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAP  160 (357)
Q Consensus        81 ~v~~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~  160 (357)
                      ++..|++||+|++..                                  ...|+|++|+.++.+.++++|++++++++++
T Consensus        81 ~v~~~~~Gd~V~~~~----------------------------------~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~  126 (341)
T cd08290          81 GVKSLKPGDWVIPLR----------------------------------PGLGTWRTHAVVPADDLIKVPNDVDPEQAAT  126 (341)
T ss_pred             CCCCCCCCCEEEecC----------------------------------CCCccchheEeccHHHeEeCCCCCCHHHHHH
Confidence            999999999996531                                  1359999999999999999999999999999


Q ss_pred             ccchhhhhhhhhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCc----HHHHHHHHhcCCcEEEcCCCh
Q 018382          161 LLCAGVTVFSPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSD----KKRVEAMEHLGADQYLVSSDA  235 (357)
Q Consensus       161 ~~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~----~~~~~~~~~~g~~~vv~~~~~  235 (357)
                      +++.+.|||+++.....++++++|||+|+ |++|++++|+|+..|++|+++++++    ++.+.+.+ +|++++++.+..
T Consensus       127 ~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~  205 (341)
T cd08290         127 LSVNPCTAYRLLEDFVKLQPGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDRPDLEELKERLKA-LGADHVLTEEEL  205 (341)
T ss_pred             hhccHHHHHHHHHhhcccCCCCEEEEccchhHHHHHHHHHHHHcCCeEEEEEcCCCcchhHHHHHHh-cCCCEEEeCccc
Confidence            99999999999987777799999999986 9999999999999999999998876    56777766 999999887653


Q ss_pred             ---hHHHH---hhC-CccEEEEcCCCCCChHHHHhccccCCeEEEEccCCC-CcccchHHHhhccceEEEEeecCH----
Q 018382          236 ---TRMQE---AAD-SLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINT-PMQFLTPMVMLGRKAITGSFIGSM----  303 (357)
Q Consensus       236 ---~~~~~---~~~-~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~~----  303 (357)
                         +....   ... ++|++|||+|+. .....+++++++|+++.++.... ...++....+.++.++.+......    
T Consensus       206 ~~~~~~~~i~~~~~~~~d~vld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (341)
T cd08290         206 RSLLATELLKSAPGGRPKLALNCVGGK-SATELARLLSPGGTMVTYGGMSGQPVTVPTSLLIFKDITLRGFWLTRWLKRA  284 (341)
T ss_pred             ccccHHHHHHHHcCCCceEEEECcCcH-hHHHHHHHhCCCCEEEEEeccCCCCcccCHHHHhhCCceEEEEecHHHHhhc
Confidence               33232   222 699999999987 67788999999999999985432 233444455678889888876432    


Q ss_pred             ------HHHHHHHHHHHhcCCCccE-EEe---ecccHHHHHHHHHcCCccEEEEEec
Q 018382          304 ------KETKEMLEFCREKGVTSMI-EVI---KMDYVNKAFERLEKNDVRYRFVVDV  350 (357)
Q Consensus       304 ------~~~~~~~~~~~~~~l~~~i-~~~---~~~~~~~a~~~~~~~~~~Gkvvi~~  350 (357)
                            ..+..+++++.++.+.+.. ++|   +++++++|++.+++++..||+++.+
T Consensus       285 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~v~~~  341 (341)
T cd08290         285 NPEEKEDMLEELAELIREGKLKAPPVEKVTDDPLEEFKDALANALKGGGGGKQVLVM  341 (341)
T ss_pred             CHHHHHHHHHHHHHHHHcCCccCCcccccccCCHHHHHHHHHHHhhcCCCCeEEEeC
Confidence                  2477888899999998755 778   9999999999999999999999864

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=3.1e-37  Score=281.40  Aligned_cols=296  Identities=25%  Similarity=0.389  Sum_probs=245.9

Q ss_pred             eeehccCCC-CCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCCCC
Q 018382           11 IGWAAKDPS-GILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGD   89 (357)
Q Consensus        11 ~~~~~~~~~-~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd   89 (357)
                      ++|+..+++ ..+++++++.|++.++||+||+.++++|++|++...|.......|.++|+|++|+|+++|++++.|++||
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~p~~~~~~v~V~v~~~~l~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd   81 (306)
T cd08258           2 KALVKTGPGPGNVELREVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYDPVETPVVLGHEFSGTIVEVGPDVEGWKVGD   81 (306)
T ss_pred             eeEEEecCCCCceEEeecCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCcCCCCeeeccceEEEEEEECCCcCcCCCCC
Confidence            466655433 5688999999999999999999999999999998888754334577899999999999999999999999


Q ss_pred             EEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhhhh
Q 018382           90 KVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVF  169 (357)
Q Consensus        90 ~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~  169 (357)
                      +|++......||.|..|..+..+.|+...  +.     |....|+|++|++++.+.++++|+++++++++ ++..+.+||
T Consensus        82 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-----~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa-~~~~~~~a~  153 (306)
T cd08258          82 RVVSETTFSTCGRCPYCRRGDYNLCPHRK--GI-----GTQADGGFAEYVLVPEESLHELPENLSLEAAA-LTEPLAVAV  153 (306)
T ss_pred             EEEEccCcCCCCCCcchhCcCcccCCCCc--ee-----eecCCCceEEEEEcchHHeEECcCCCCHHHHH-hhchHHHHH
Confidence            99888777889999999999999998631  11     23467999999999999999999999999887 777889999


Q ss_pred             hhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEe-C-CcHHHHHHHHhcCCcEEEcCCChhHHHHh---h--
Q 018382          170 SPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVIS-S-SDKKRVEAMEHLGADQYLVSSDATRMQEA---A--  242 (357)
Q Consensus       170 ~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~-~-~~~~~~~~~~~~g~~~vv~~~~~~~~~~~---~--  242 (357)
                      +++.....++++++|||.|+|.+|.+++|+|+..|++|+++. . ++++.+.+.+ +|++++ +.+..+....+   .  
T Consensus       154 ~~l~~~~~~~~g~~vlI~g~g~~g~~~~~la~~~G~~v~~~~~~~~~~~~~~~~~-~g~~~~-~~~~~~~~~~l~~~~~~  231 (306)
T cd08258         154 HAVAERSGIRPGDTVVVFGPGPIGLLAAQVAKLQGATVVVVGTEKDEVRLDVAKE-LGADAV-NGGEEDLAELVNEITDG  231 (306)
T ss_pred             HHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHH-hCCccc-CCCcCCHHHHHHHHcCC
Confidence            998887788999999998889999999999999999988773 2 3335555555 999888 76654443332   2  


Q ss_pred             CCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCC-CcccchHHHhhccceEEEEeecCHHHHHHHHHHHHhc
Q 018382          243 DSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINT-PMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREK  316 (357)
Q Consensus       243 ~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~  316 (357)
                      .++|++||+.|....+...+++++++|+++.+|.... ...++...++.+++++.|+++++.++++++++++++|
T Consensus       232 ~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~  306 (306)
T cd08258         232 DGADVVIECSGAVPALEQALELLRKGGRIVQVGIFGPLAASIDVERIIQKELSVIGSRSSTPASWETALRLLASG  306 (306)
T ss_pred             CCCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccCCCCcccCHHHHhhcCcEEEEEecCchHhHHHHHHHHhcC
Confidence            3799999999865578889999999999999988652 3445666677899999999999999999999999875

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=100.00  E-value=2e-36  Score=278.28  Aligned_cols=304  Identities=21%  Similarity=0.228  Sum_probs=248.8

Q ss_pred             eeehcc--CCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCC---CCCCCCccCccccEEEEEeCCCCCCC
Q 018382           11 IGWAAK--DPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLG---MSNYPMVPGHEVVGEVKEVGSEVSNF   85 (357)
Q Consensus        11 ~~~~~~--~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~---~~~~p~~lG~e~~G~V~~vG~~v~~~   85 (357)
                      +++.+.  +.+..+.+.+.+.|.+.++||+|++.++++|++|++...|..+   ...+|.++|+|++|+|+++|++++.+
T Consensus         2 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~g~e~~G~v~~~G~~v~~~   81 (324)
T cd08244           2 RAIRLHEFGPPEVLVPEDVPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELPYVPGGEVAGVVDAVGPGVDPA   81 (324)
T ss_pred             eEEEEcCCCCccceEEeccCCCCCCCCEEEEEEEEEeCCHHHHHHhCCCCCCCCCCCCCcCCccceEEEEEEeCCCCCCC
Confidence            444443  2334566667777788999999999999999999998887643   23456789999999999999999999


Q ss_pred             CCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchh
Q 018382           86 KVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAG  165 (357)
Q Consensus        86 ~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~  165 (357)
                      ++||+|++...                                 ...|+|++|+.++.++++++|+++++++++.+++.+
T Consensus        82 ~~Gd~V~~~~~---------------------------------~~~g~~~~~~~v~~~~~~~lp~~~~~~~a~~~~~~~  128 (324)
T cd08244          82 WLGRRVVAHTG---------------------------------RAGGGYAELAVADVDSLHPVPDGLDLEAAVAVVHDG  128 (324)
T ss_pred             CCCCEEEEccC---------------------------------CCCceeeEEEEEchHHeEeCCCCCCHHHHhhhcchH
Confidence            99999975310                                 137899999999999999999999999999999999


Q ss_pred             hhhhhhhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHh---
Q 018382          166 VTVFSPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEA---  241 (357)
Q Consensus       166 ~ta~~~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~---  241 (357)
                      .|||. +.....++++++|+|+|+ |.+|++++++|+..|++|+++++++++.+.+.+ +|++++++.++.+..+.+   
T Consensus       129 ~ta~~-~~~~~~~~~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~  206 (324)
T cd08244         129 RTALG-LLDLATLTPGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALVRA-LGADVAVDYTRPDWPDQVREA  206 (324)
T ss_pred             HHHHH-HHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCCCEEEecCCccHHHHHHHH
Confidence            99965 444556699999999986 999999999999999999999999999888866 999988887765443333   


Q ss_pred             h--CCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCC-cccchHHHhhccceEEEEeecC------HHHHHHHHHH
Q 018382          242 A--DSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTP-MQFLTPMVMLGRKAITGSFIGS------MKETKEMLEF  312 (357)
Q Consensus       242 ~--~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~~------~~~~~~~~~~  312 (357)
                      .  .++|+++|++|+. ....++++++++|+++.+|..... ..++....+.++.++.+.....      .+.+.+++++
T Consensus       207 ~~~~~~d~vl~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (324)
T cd08244         207 LGGGGVTVVLDGVGGA-IGRAALALLAPGGRFLTYGWASGEWTALDEDDARRRGVTVVGLLGVQAERGGLRALEARALAE  285 (324)
T ss_pred             cCCCCceEEEECCChH-hHHHHHHHhccCcEEEEEecCCCCCCccCHHHHhhCCcEEEEeecccCCHHHHHHHHHHHHHH
Confidence            2  2699999999987 678899999999999999875432 2334344567888888776543      2456778889


Q ss_pred             HHhcCCCccE-EEeecccHHHHHHHHHcCCccEEEEEec
Q 018382          313 CREKGVTSMI-EVIKMDYVNKAFERLEKNDVRYRFVVDV  350 (357)
Q Consensus       313 ~~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~  350 (357)
                      +.++.+.+.+ +.|+++++++|++.+++++..||+++++
T Consensus       286 l~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~  324 (324)
T cd08244         286 AAAGRLVPVVGQTFPLERAAEAHAALEARSTVGKVLLLP  324 (324)
T ss_pred             HHCCCccCccceEEeHHHHHHHHHHHHcCCCCceEEEeC
Confidence            9999988766 8999999999999999999999999864

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=5.5e-36  Score=276.54  Aligned_cols=325  Identities=24%  Similarity=0.325  Sum_probs=266.4

Q ss_pred             eeeehccC--CCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCC-CCCCCCccCccccEEEEEeCCCCCCCC
Q 018382           10 TIGWAAKD--PSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLG-MSNYPMVPGHEVVGEVKEVGSEVSNFK   86 (357)
Q Consensus        10 ~~~~~~~~--~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~-~~~~p~~lG~e~~G~V~~vG~~v~~~~   86 (357)
                      |++|+...  ....+++++.+.|.+.++|++|++.++++|++|++...|.++ ....|.++|||++|+|+++|+++.+|+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~   80 (336)
T cd08276           1 MKAWRLSGGGGLDNLKLVEEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYPPPVKDPLIPLSDGAGEVVAVGEGVTRFK   80 (336)
T ss_pred             CeEEEEeccCCCcceEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhcCCCCCCCCCCcccccceeEEEEEeCCCCcCCC
Confidence            34555542  235677788888889999999999999999999999887654 234677899999999999999999999


Q ss_pred             CCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhh
Q 018382           87 VGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGV  166 (357)
Q Consensus        87 ~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~  166 (357)
                      +||+|++..... |      ..+.+..|...  .     .+|.+..|++++|+.++.+.++++|+++++.+++.+++.+.
T Consensus        81 ~Gd~V~~~~~~~-~------~~~~~~~~~~~--~-----~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~  146 (336)
T cd08276          81 VGDRVVPTFFPN-W------LDGPPTAEDEA--S-----ALGGPIDGVLAEYVVLPEEGLVRAPDHLSFEEAATLPCAGL  146 (336)
T ss_pred             CCCEEEEecccc-c------ccccccccccc--c-----ccccccCceeeeEEEecHHHeEECCCCCCHHHhhhhhHHHH
Confidence            999997654332 2      33333444321  1     12344689999999999999999999999999999999999


Q ss_pred             hhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCC-hhH---HHHhh
Q 018382          167 TVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSD-ATR---MQEAA  242 (357)
Q Consensus       167 ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~-~~~---~~~~~  242 (357)
                      +||.++.....+++|++|+|+|+|++|++++++++..|++|+++++++++.+.+.+ +|.+++++.+. .+.   +....
T Consensus       147 ~a~~~l~~~~~~~~g~~vli~g~g~~g~~~~~~a~~~G~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~  225 (336)
T cd08276         147 TAWNALFGLGPLKPGDTVLVQGTGGVSLFALQFAKAAGARVIATSSSDEKLERAKA-LGADHVINYRTTPDWGEEVLKLT  225 (336)
T ss_pred             HHHHHHHhhcCCCCCCEEEEECCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cCCCEEEcCCcccCHHHHHHHHc
Confidence            99999988777799999999988999999999999999999999999999888887 89999888765 333   33333


Q ss_pred             C--CccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCC-cccchHHHhhccceEEEEeecCHHHHHHHHHHHHhcCCC
Q 018382          243 D--SLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTP-MQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVT  319 (357)
Q Consensus       243 ~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~  319 (357)
                      .  ++|+++|+++.. ....++++++++|+++.+|..... ........+.++.++.+......+.++++++++.++.+.
T Consensus       226 ~~~~~d~~i~~~~~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~  304 (336)
T cd08276         226 GGRGVDHVVEVGGPG-TLAQSIKAVAPGGVISLIGFLSGFEAPVLLLPLLTKGATLRGIAVGSRAQFEAMNRAIEAHRIR  304 (336)
T ss_pred             CCCCCcEEEECCChH-HHHHHHHhhcCCCEEEEEccCCCCccCcCHHHHhhcceEEEEEecCcHHHHHHHHHHHHcCCcc
Confidence            3  799999999876 788999999999999999875543 234455667889999998877778899999999999887


Q ss_pred             ccE-EEeecccHHHHHHHHHcCCccEEEEEec
Q 018382          320 SMI-EVIKMDYVNKAFERLEKNDVRYRFVVDV  350 (357)
Q Consensus       320 ~~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~  350 (357)
                      +.. +.|++++++++++.+.+++..||+++++
T Consensus       305 ~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~  336 (336)
T cd08276         305 PVIDRVFPFEEAKEAYRYLESGSHFGKVVIRV  336 (336)
T ss_pred             cccCcEEeHHHHHHHHHHHHhCCCCceEEEeC
Confidence            755 8999999999999999988889999864

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases

Probab=100.00  E-value=4.3e-36  Score=276.12  Aligned_cols=306  Identities=24%  Similarity=0.302  Sum_probs=241.5

Q ss_pred             eeehccCC--CCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCC-CCCCCccCccccEEEEEeCCCCCCCCC
Q 018382           11 IGWAAKDP--SGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGM-SNYPMVPGHEVVGEVKEVGSEVSNFKV   87 (357)
Q Consensus        11 ~~~~~~~~--~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~-~~~p~~lG~e~~G~V~~vG~~v~~~~~   87 (357)
                      +++++...  +.+++++++|.|.+.++||+||+.++++|++|+..+.|..+. ..+|.++|||++|+|+++  +++.|++
T Consensus         2 ~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~--~~~~~~~   79 (325)
T cd05280           2 KALVVEEQDGGVSLFLRTLPLDDLPEGDVLIRVHYSSLNYKDALAATGNGGVTRNYPHTPGIDAAGTVVSS--DDPRFRE   79 (325)
T ss_pred             ceEEEcccCCCCcceEEeCCCCCCCCCeEEEEEEEeecChHHHHHhcCCCCCCCCCCCccCcccEEEEEEe--CCCCCCC
Confidence            44444332  237889999999999999999999999999999998887542 235778999999999999  4568999


Q ss_pred             CCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhh
Q 018382           88 GDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVT  167 (357)
Q Consensus        88 Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~t  167 (357)
                      ||+|++...                             ..|...+|++++|++++++.++++|+++++++++.+++.+.+
T Consensus        80 Gd~V~~~~~-----------------------------~~g~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~t  130 (325)
T cd05280          80 GDEVLVTGY-----------------------------DLGMNTDGGFAEYVRVPADWVVPLPEGLSLREAMILGTAGFT  130 (325)
T ss_pred             CCEEEEccc-----------------------------ccCCCCCceeEEEEEEchhhEEECCCCCCHHHHHhhHHHHHH
Confidence            999975320                             012345799999999999999999999999999999999999


Q ss_pred             hhhhhhccCCC--C-CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChh--HHHHh
Q 018382          168 VFSPLSHFGLK--Q-SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDAT--RMQEA  241 (357)
Q Consensus       168 a~~~l~~~~~~--~-~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~--~~~~~  241 (357)
                      ||.++......  . .+++|+|+|+ |.+|++++|+|+..|++|+++++++++.+.+++ +|++++++.++..  ..+..
T Consensus       131 a~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~  209 (325)
T cd05280         131 AALSVHRLEDNGQTPEDGPVLVTGATGGVGSIAVAILAKLGYTVVALTGKEEQADYLKS-LGASEVLDREDLLDESKKPL  209 (325)
T ss_pred             HHHHHHHHhhccCCCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-cCCcEEEcchhHHHHHHHHh
Confidence            99998665432  4 3579999997 999999999999999999999999999888876 9999998876532  22222


Q ss_pred             h-CCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCC-cccchHHHhhccceEEEEeecCH------HHHHHHHHHH
Q 018382          242 A-DSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTP-MQFLTPMVMLGRKAITGSFIGSM------KETKEMLEFC  313 (357)
Q Consensus       242 ~-~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~~~------~~~~~~~~~~  313 (357)
                      . +++|++||++++. .+..++++++++|+++.+|..... ..+....++.++.++.+......      +.++.+.+++
T Consensus       210 ~~~~~d~vi~~~~~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (325)
T cd05280         210 LKARWAGAIDTVGGD-VLANLLKQTKYGGVVASCGNAAGPELTTTVLPFILRGVSLLGIDSVNCPMELRKQVWQKLATEW  288 (325)
T ss_pred             cCCCccEEEECCchH-HHHHHHHhhcCCCEEEEEecCCCCccccccchheeeeeEEEEEEeecCchhHHHHHHHHHHHHH
Confidence            2 3799999999987 899999999999999999875432 23344444568888888765321      2233444445


Q ss_pred             HhcCCCccE-EEeecccHHHHHHHHHcCCccEEEEEec
Q 018382          314 REKGVTSMI-EVIKMDYVNKAFERLEKNDVRYRFVVDV  350 (357)
Q Consensus       314 ~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~  350 (357)
                      ..+ +.+++ ++|+++++++|++.+.+++..||+++++
T Consensus       289 ~~~-~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  325 (325)
T cd05280         289 KPD-LLEIVVREISLEELPEAIDRLLAGKHRGRTVVKI  325 (325)
T ss_pred             hcC-CccceeeEecHHHHHHHHHHHhcCCcceEEEEeC
Confidence            555 33345 9999999999999999999999999864

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so

>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=3.5e-36  Score=274.32  Aligned_cols=294  Identities=23%  Similarity=0.279  Sum_probs=245.4

Q ss_pred             eeehccCC-CCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCCCC
Q 018382           11 IGWAAKDP-SGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGD   89 (357)
Q Consensus        11 ~~~~~~~~-~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd   89 (357)
                      ++|++... +..+++++.+.|.+.++||+||+.++++|+.|+++..+.    ..+.++|+|++|+|+++|++++.|++||
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~p~~~~~ev~v~v~~~~i~~~d~~~~~~~----~~~~~~g~e~~G~v~~~G~~v~~~~~Gd   77 (305)
T cd08270           2 RALVVDPDAPLRLRLGEVPDPQPAPHEALVRVAAISLNRGELKFAAER----PDGAVPGWDAAGVVERAAADGSGPAVGA   77 (305)
T ss_pred             eEEEEccCCCceeEEEecCCCCCCCCEEEEEEEEEecCHHHHHhhccC----CCCCcccceeEEEEEEeCCCCCCCCCCC
Confidence            45555422 456777789999999999999999999999999876522    2356899999999999999999999999


Q ss_pred             EEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhhhh
Q 018382           90 KVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVF  169 (357)
Q Consensus        90 ~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~  169 (357)
                      +|+..                                   ...|+|++|+.++.+.++++|+++++++++++++.+.+||
T Consensus        78 ~V~~~-----------------------------------~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~  122 (305)
T cd08270          78 RVVGL-----------------------------------GAMGAWAELVAVPTGWLAVLPDGVSFAQAATLPVAGVTAL  122 (305)
T ss_pred             EEEEe-----------------------------------cCCcceeeEEEEchHHeEECCCCCCHHHHHHhHhHHHHHH
Confidence            99643                                   1368999999999999999999999999999999999999


Q ss_pred             hhhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEE
Q 018382          170 SPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYI  248 (357)
Q Consensus       170 ~~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v  248 (357)
                      +++...... ++++|+|+|+ |++|++++++++..|++|+.+++++++.+.+++ +|++.+++... +   ...+++|++
T Consensus       123 ~~~~~~~~~-~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~-~---~~~~~~d~v  196 (305)
T cd08270         123 RALRRGGPL-LGRRVLVTGASGGVGRFAVQLAALAGAHVVAVVGSPARAEGLRE-LGAAEVVVGGS-E---LSGAPVDLV  196 (305)
T ss_pred             HHHHHhCCC-CCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cCCcEEEeccc-c---ccCCCceEE
Confidence            999888874 6999999987 999999999999999999999999989888887 99876554322 1   112479999


Q ss_pred             EEcCCCCCChHHHHhccccCCeEEEEccCCCC-cccchHHHhh--ccceEEEEeecC----HHHHHHHHHHHHhcCCCcc
Q 018382          249 IDTVPANHPLEPYLSLLKLDGKLILTGVINTP-MQFLTPMVML--GRKAITGSFIGS----MKETKEMLEFCREKGVTSM  321 (357)
Q Consensus       249 ~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~--~~~~i~g~~~~~----~~~~~~~~~~~~~~~l~~~  321 (357)
                      +|++|+. .+..++++++++|+++.+|..... ..++...+..  ++.++.++....    .+.++.+++++.++.+.+.
T Consensus       197 l~~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  275 (305)
T cd08270         197 VDSVGGP-QLARALELLAPGGTVVSVGSSSGEPAVFNPAAFVGGGGGRRLYTFFLYDGEPLAADLARLLGLVAAGRLDPR  275 (305)
T ss_pred             EECCCcH-HHHHHHHHhcCCCEEEEEeccCCCcccccHHHHhcccccceEEEEEccCHHHHHHHHHHHHHHHHCCCccce
Confidence            9999987 789999999999999999865422 2344444444  578888877653    3567888999999999876


Q ss_pred             E-EEeecccHHHHHHHHHcCCccEEEEEec
Q 018382          322 I-EVIKMDYVNKAFERLEKNDVRYRFVVDV  350 (357)
Q Consensus       322 i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~  350 (357)
                      + ++++++++++|++.+.+++..||+++++
T Consensus       276 ~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~  305 (305)
T cd08270         276 IGWRGSWTEIDEAAEALLARRFRGKAVLDV  305 (305)
T ss_pred             eccEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence            6 8999999999999999999999999875

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=100.00  E-value=3.8e-36  Score=276.25  Aligned_cols=292  Identities=23%  Similarity=0.304  Sum_probs=247.9

Q ss_pred             CcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCC-CCCCCCccCccccEEEEEeCCCCCCCCCCCEEEEccccCC
Q 018382           21 ILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLG-MSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVGVLVGC   99 (357)
Q Consensus        21 ~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~-~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~   99 (357)
                      .+.+++.+.|++.++||+||+.++++|+.|+.++.|..+ ...+|.++|+|++|+|+++|++++.+++||+|++.+    
T Consensus        13 ~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~----   88 (323)
T cd05282          13 VLELVSLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGSRPPLPAVPGNEGVGVVVEVGSGVSGLLVGQRVLPLG----   88 (323)
T ss_pred             eEEeEeCCCCCCCCCeEEEEEEeccCCHHHHHHhcCcCCCCCCCCCcCCcceEEEEEEeCCCCCCCCCCCEEEEeC----
Confidence            566778889999999999999999999999998877654 234577899999999999999999999999997531    


Q ss_pred             CCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhhhhhhhhccCCCC
Q 018382          100 CRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQ  179 (357)
Q Consensus       100 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~  179 (357)
                                                     ..|+|++|+.++...++++|+++++++++.+++.+.+||.++.....+.
T Consensus        89 -------------------------------~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~ta~~~~~~~~~~~  137 (323)
T cd05282          89 -------------------------------GEGTWQEYVVAPADDLIPVPDSISDEQAAMLYINPLTAWLMLTEYLKLP  137 (323)
T ss_pred             -------------------------------CCCcceeEEecCHHHeEECCCCCCHHHHHHHhccHHHHHHHHHHhccCC
Confidence                                           2689999999999999999999999999999999999999998888779


Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHH---hh--CCccEEEEcCC
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQE---AA--DSLDYIIDTVP  253 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~---~~--~~~d~v~d~~g  253 (357)
                      ++++|||+|+ |.+|++++++|+..|++|+++++++++.+.+++ +|++++++.+..+...+   ..  .++|++|||+|
T Consensus       138 ~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g  216 (323)
T cd05282         138 PGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEELKA-LGADEVIDSSPEDLAQRVKEATGGAGARLALDAVG  216 (323)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHHHHh-cCCCEEecccchhHHHHHHHHhcCCCceEEEECCC
Confidence            9999999987 999999999999999999999999999888866 99999998876444333   32  27999999999


Q ss_pred             CCCChHHHHhccccCCeEEEEccCCCC-cccchHHHhhccceEEEEeecCH----------HHHHHHHHHHHhcCCCccE
Q 018382          254 ANHPLEPYLSLLKLDGKLILTGVINTP-MQFLTPMVMLGRKAITGSFIGSM----------KETKEMLEFCREKGVTSMI  322 (357)
Q Consensus       254 ~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~~~----------~~~~~~~~~~~~~~l~~~i  322 (357)
                      +. .....+++++++|+++.+|..... ..++...+..++.++.+......          +.+.++++++.++.+.+.+
T Consensus       217 ~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~  295 (323)
T cd05282         217 GE-SATRLARSLRPGGTLVNYGLLSGEPVPFPRSVFIFKDITVRGFWLRQWLHSATKEAKQETFAEVIKLVEAGVLTTPV  295 (323)
T ss_pred             CH-HHHHHHHhhCCCCEEEEEccCCCCCCCCCHHHHhhcCceEEEEEehHhhccCCHHHHHHHHHHHHHHHhCCCcccCc
Confidence            87 677889999999999999876442 33455555558888888776432          3467788889999988766


Q ss_pred             -EEeecccHHHHHHHHHcCCccEEEEEe
Q 018382          323 -EVIKMDYVNKAFERLEKNDVRYRFVVD  349 (357)
Q Consensus       323 -~~~~~~~~~~a~~~~~~~~~~Gkvvi~  349 (357)
                       +.|+++++++|++.+.+++..||++++
T Consensus       296 ~~~~~~~~~~~a~~~~~~~~~~~kvv~~  323 (323)
T cd05282         296 GAKFPLEDFEEAVAAAEQPGRGGKVLLT  323 (323)
T ss_pred             cceecHHHHHHHHHHHhcCCCCceEeeC
Confidence             899999999999999998888999864

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional

Probab=100.00  E-value=2.9e-36  Score=277.69  Aligned_cols=303  Identities=20%  Similarity=0.228  Sum_probs=244.9

Q ss_pred             eeeehc--cCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCC
Q 018382           10 TIGWAA--KDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKV   87 (357)
Q Consensus        10 ~~~~~~--~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~   87 (357)
                      |++|..  .+++..+.+++++.|+|.++||+||+.++++|++|+.+..|.++...+|.++|+|++|+|+.+|++++.+++
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~~   81 (327)
T PRK10754          2 AKRIEFHKHGGPEVLQAVEFTPADPAENEVQVENKAIGINYIDTYIRSGLYPPPSLPSGLGTEAAGVVSKVGSGVKHIKV   81 (327)
T ss_pred             ceEEEEeccCChhHeEEeeccCCCCCCCEEEEEEEEEEcCHHHhhhcCCCCCCCCCCCccCcceEEEEEEeCCCCCCCCC
Confidence            445554  444557888899999999999999999999999999998887765556788999999999999999999999


Q ss_pred             CCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhh
Q 018382           88 GDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVT  167 (357)
Q Consensus        88 Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~t  167 (357)
                      ||+|+..                                  ....|+|++|+.++.+.++++|+++++++++.+++.+.+
T Consensus        82 Gd~V~~~----------------------------------~~~~g~~~~~v~v~~~~~~~lp~~~~~~~~~~~~~~~~t  127 (327)
T PRK10754         82 GDRVVYA----------------------------------QSALGAYSSVHNVPADKAAILPDAISFEQAAASFLKGLT  127 (327)
T ss_pred             CCEEEEC----------------------------------CCCCcceeeEEEcCHHHceeCCCCCCHHHHHHHHHHHHH
Confidence            9999642                                  113589999999999999999999999999999999999


Q ss_pred             hhhhhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhH---HHHhhC
Q 018382          168 VFSPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATR---MQEAAD  243 (357)
Q Consensus       168 a~~~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~---~~~~~~  243 (357)
                      ||.++.....++++++|+|+|+ |.+|++++|+++..|++|+++++++++.+.+++ +|++++++.+..+.   +.+...
T Consensus       128 a~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~lak~~G~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~  206 (327)
T PRK10754        128 VYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGSAQKAQRAKK-AGAWQVINYREENIVERVKEITG  206 (327)
T ss_pred             HHHHHHhhcCCCCCCEEEEEeCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-CCCCEEEcCCCCcHHHHHHHHcC
Confidence            9999888777799999999975 999999999999999999999999999888866 99988887765433   333333


Q ss_pred             --CccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCC-cccchHHHhhccc------eEEEEeecCH----HHHHHHH
Q 018382          244 --SLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTP-MQFLTPMVMLGRK------AITGSFIGSM----KETKEML  310 (357)
Q Consensus       244 --~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~------~i~g~~~~~~----~~~~~~~  310 (357)
                        ++|++|||+++. .....+++++++|+++.+|..... ..+....+..++.      .+.+. ..+.    +.+..++
T Consensus       207 ~~~~d~vl~~~~~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  284 (327)
T PRK10754        207 GKKVRVVYDSVGKD-TWEASLDCLQRRGLMVSFGNASGPVTGVNLGILNQKGSLYVTRPSLQGY-ITTREELTEASNELF  284 (327)
T ss_pred             CCCeEEEEECCcHH-HHHHHHHHhccCCEEEEEccCCCCCCCcCHHHHhccCceEEecceeecc-cCCHHHHHHHHHHHH
Confidence              799999999986 788899999999999999876432 1122222221111      11111 1122    2345688


Q ss_pred             HHHHhcCCCcc--E-EEeecccHHHHHHHHHcCCccEEEEEe
Q 018382          311 EFCREKGVTSM--I-EVIKMDYVNKAFERLEKNDVRYRFVVD  349 (357)
Q Consensus       311 ~~~~~~~l~~~--i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~  349 (357)
                      +++.++.+++.  + +.|+++++.+|++.+++++..||+|+.
T Consensus       285 ~~l~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~  326 (327)
T PRK10754        285 SLIASGVIKVDVAEQQKFPLKDAQRAHEILESRATQGSSLLI  326 (327)
T ss_pred             HHHHCCCeeeecccCcEEcHHHHHHHHHHHHcCCCcceEEEe
Confidence            89999999853  3 899999999999999999999999985

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=100.00  E-value=8.1e-36  Score=275.27  Aligned_cols=307  Identities=25%  Similarity=0.295  Sum_probs=252.1

Q ss_pred             eeeehccCCC--CCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCC-CCCCCCccCccccEEEEEeCCCCCCCC
Q 018382           10 TIGWAAKDPS--GILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLG-MSNYPMVPGHEVVGEVKEVGSEVSNFK   86 (357)
Q Consensus        10 ~~~~~~~~~~--~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~-~~~~p~~lG~e~~G~V~~vG~~v~~~~   86 (357)
                      |+++++...+  ..+++++.+.|++.++|++||+.++++|+.|+....|..+ ....|.++|+|++|+|+++|++++.++
T Consensus         2 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~   81 (334)
T PTZ00354          2 MRAVTLKGFGGVDVLKIGESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPPPPGSSEILGLEVAGYVEDVGSDVKRFK   81 (334)
T ss_pred             cEEEEEEecCCCcceEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccceeeEEEEEEeCCCCCCCC
Confidence            5566654322  3566677888889999999999999999999999887654 234456899999999999999999999


Q ss_pred             CCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhh
Q 018382           87 VGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGV  166 (357)
Q Consensus        87 ~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~  166 (357)
                      +||+|+..                                   ..+|+|++|++++.+.++++|+++++++++.+++.+.
T Consensus        82 ~Gd~V~~~-----------------------------------~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~  126 (334)
T PTZ00354         82 EGDRVMAL-----------------------------------LPGGGYAEYAVAHKGHVMHIPQGYTFEEAAAIPEAFL  126 (334)
T ss_pred             CCCEEEEe-----------------------------------cCCCceeeEEEecHHHcEeCCCCCCHHHHHHHHHHHH
Confidence            99999643                                   1358999999999999999999999999999999999


Q ss_pred             hhhhhhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChh-HHHH---h
Q 018382          167 TVFSPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDAT-RMQE---A  241 (357)
Q Consensus       167 ta~~~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~-~~~~---~  241 (357)
                      +||+++.....++++++|+|+|+ |++|++++++|+..|++++++++++++.+.+.+ +|++++++....+ ..++   .
T Consensus       127 ta~~~l~~~~~~~~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~  205 (334)
T PTZ00354        127 TAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFCKK-LAAIILIRYPDEEGFAPKVKKL  205 (334)
T ss_pred             HHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cCCcEEEecCChhHHHHHHHHH
Confidence            99999988777799999999986 999999999999999998889999999888876 9999888876543 3332   2


Q ss_pred             h--CCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCC-cc-cchHHHhhccceEEEEeecCH----------HHHH
Q 018382          242 A--DSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTP-MQ-FLTPMVMLGRKAITGSFIGSM----------KETK  307 (357)
Q Consensus       242 ~--~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~-~~~~~~~~~~~~i~g~~~~~~----------~~~~  307 (357)
                      .  .++|++||+.++. .+..++++++++|+++.++..... .. ++...++.+..++.++.....          +.++
T Consensus       206 ~~~~~~d~~i~~~~~~-~~~~~~~~l~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (334)
T PTZ00354        206 TGEKGVNLVLDCVGGS-YLSETAEVLAVDGKWIVYGFMGGAKVEKFNLLPLLRKRASIIFSTLRSRSDEYKADLVASFER  284 (334)
T ss_pred             hCCCCceEEEECCchH-HHHHHHHHhccCCeEEEEecCCCCcccccCHHHHHhhCCEEEeeeccccchhhhHHHHHHHHH
Confidence            2  3799999999876 888999999999999999864332 22 555556667778887765431          2346


Q ss_pred             HHHHHHHhcCCCccE-EEeecccHHHHHHHHHcCCccEEEEEecCCC
Q 018382          308 EMLEFCREKGVTSMI-EVIKMDYVNKAFERLEKNDVRYRFVVDVAGS  353 (357)
Q Consensus       308 ~~~~~~~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~~~~  353 (357)
                      .+++++.++.+.+.+ +.|++++++++++.+++++..||+++++.++
T Consensus       285 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~kvvv~~~~~  331 (334)
T PTZ00354        285 EVLPYMEEGEIKPIVDRTYPLEEVAEAHTFLEQNKNIGKVVLTVNEP  331 (334)
T ss_pred             HHHHHHHCCCccCccccEEcHHHHHHHHHHHHhCCCCceEEEecCCC
Confidence            778888899888766 8999999999999999888889999987654

>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family

Probab=100.00  E-value=2.4e-35  Score=271.10  Aligned_cols=302  Identities=25%  Similarity=0.317  Sum_probs=242.1

Q ss_pred             cCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCC-CCCCCccCccccEEEEEeCCCCCCCCCCCEEEEc
Q 018382           16 KDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGM-SNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVG   94 (357)
Q Consensus        16 ~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~-~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~   94 (357)
                      .+++..++++++|+|.+.++||+||+.++++|++|+..+.|.++. ...|.++|||++|+|+.  +++.+|++||+|++.
T Consensus         8 ~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~~Gd~V~~~   85 (323)
T TIGR02823         8 EDGKVSAQVETLDLSDLPEGDVLIKVAYSSLNYKDALAITGKGGVVRSYPMIPGIDAAGTVVS--SEDPRFREGDEVIVT   85 (323)
T ss_pred             CCCCcceeEeecCCCCCCCCeEEEEEEEEEcCHHHHHHHcCCCCCCCCCCccceeeeEEEEEe--cCCCCCCCCCEEEEc
Confidence            334447789999999999999999999999999999998887532 34578899999999998  567789999999754


Q ss_pred             cccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhhhhhhhhc
Q 018382           95 VLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSH  174 (357)
Q Consensus        95 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~  174 (357)
                      ..                             ..|.+..|++++|+.++.+.++++|+++++++++.+++.+.+||.++..
T Consensus        86 ~~-----------------------------~~~~~~~g~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~  136 (323)
T TIGR02823        86 GY-----------------------------GLGVSHDGGYSQYARVPADWLVPLPEGLSLREAMALGTAGFTAALSVMA  136 (323)
T ss_pred             cC-----------------------------CCCCCCCccceEEEEEchhheEECCCCCCHHHhhhhhhhHHHHHHHHHH
Confidence            21                             0022357999999999999999999999999999999999999887654


Q ss_pred             cCC--CCCCC-eEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhH-HHHhh-CCccEE
Q 018382          175 FGL--KQSGL-RGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATR-MQEAA-DSLDYI  248 (357)
Q Consensus       175 ~~~--~~~~~-~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~-~~~~~-~~~d~v  248 (357)
                      ...  +.+++ +|+|+|+ |.+|++++++|+..|++++++++++++.+.+++ +|++++++.++... +.... .++|++
T Consensus       137 ~~~~~~~~~~~~vlI~g~~g~vg~~~~~la~~~G~~vi~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~d~v  215 (323)
T TIGR02823       137 LERNGLTPEDGPVLVTGATGGVGSLAVAILSKLGYEVVASTGKAEEEDYLKE-LGASEVIDREDLSPPGKPLEKERWAGA  215 (323)
T ss_pred             hhhcCCCCCCceEEEEcCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHh-cCCcEEEccccHHHHHHHhcCCCceEE
Confidence            332  57888 9999997 999999999999999999999888888888866 99998888765432 23332 369999


Q ss_pred             EEcCCCCCChHHHHhccccCCeEEEEccCCC-CcccchHHHhhccceEEEEeecC--H----HHHHHHHHHHHhcCCCcc
Q 018382          249 IDTVPANHPLEPYLSLLKLDGKLILTGVINT-PMQFLTPMVMLGRKAITGSFIGS--M----KETKEMLEFCREKGVTSM  321 (357)
Q Consensus       249 ~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~--~----~~~~~~~~~~~~~~l~~~  321 (357)
                      +|++|+. .+..++++++++|+++.+|.... ....+...++.++.++.+.....  .    +.+..+.+++.++.+.+.
T Consensus       216 ld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (323)
T TIGR02823       216 VDTVGGH-TLANVLAQLKYGGAVAACGLAGGPDLPTTVLPFILRGVSLLGIDSVYCPMALREAAWQRLATDLKPRNLESI  294 (323)
T ss_pred             EECccHH-HHHHHHHHhCCCCEEEEEcccCCCCccccHHHHhhcceEEEEEeccccCchhHHHHHHHHHHHhhcCCCcCc
Confidence            9999987 78899999999999999987643 22233344557888888865431  1    234556666777777665


Q ss_pred             EEEeecccHHHHHHHHHcCCccEEEEEec
Q 018382          322 IEVIKMDYVNKAFERLEKNDVRYRFVVDV  350 (357)
Q Consensus       322 i~~~~~~~~~~a~~~~~~~~~~Gkvvi~~  350 (357)
                      ++.|+++++++|++.+.+++..||+++++
T Consensus       295 ~~~~~l~~~~~a~~~~~~~~~~~k~vv~~  323 (323)
T TIGR02823       295 TREITLEELPEALEQILAGQHRGRTVVDV  323 (323)
T ss_pred             eeeecHHHHHHHHHHHhCCCccceEEEeC
Confidence            68999999999999999999999999864

This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=100.00  E-value=1.7e-35  Score=272.36  Aligned_cols=308  Identities=22%  Similarity=0.281  Sum_probs=237.7

Q ss_pred             eeeehccCCC--CCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCC-CCCCCCCccCccccEEEEEeCCCCCCCC
Q 018382           10 TIGWAAKDPS--GILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDL-GMSNYPMVPGHEVVGEVKEVGSEVSNFK   86 (357)
Q Consensus        10 ~~~~~~~~~~--~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~-~~~~~p~~lG~e~~G~V~~vG~~v~~~~   86 (357)
                      |++|++...+  ..+.+++++.|.|+++||+||+.++++|++|.....+.. ....+|.++|||++|+|+++|  +.+|+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~~~--~~~~~   78 (326)
T cd08289           1 FQALVVEKDEDDVSVSVKNLTLDDLPEGDVLIRVAYSSVNYKDGLASIPGGKIVKRYPFIPGIDLAGTVVESN--DPRFK   78 (326)
T ss_pred             CeeEEEeccCCcceeEEEEccCCCCCCCeEEEEEEEEecChHHhhhhcCCccccCCCCcCcccceeEEEEEcC--CCCCC
Confidence            3566654333  357788999999999999999999999999987664321 122457889999999999964  56799


Q ss_pred             CCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhh
Q 018382           87 VGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGV  166 (357)
Q Consensus        87 ~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~  166 (357)
                      +||+|++.+.                             ..|....|+|++|+.++++.++++|+++++++++.+++.+.
T Consensus        79 ~Gd~V~~~~~-----------------------------~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~a~~~~~~~~  129 (326)
T cd08289          79 PGDEVIVTSY-----------------------------DLGVSHHGGYSEYARVPAEWVVPLPKGLTLKEAMILGTAGF  129 (326)
T ss_pred             CCCEEEEccc-----------------------------ccCCCCCCcceeEEEEcHHHeEECCCCCCHHHHhhhhhHHH
Confidence            9999975421                             01233579999999999999999999999999999999999


Q ss_pred             hhhhhhhccC---CCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCCh--hHHHH
Q 018382          167 TVFSPLSHFG---LKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDA--TRMQE  240 (357)
Q Consensus       167 ta~~~l~~~~---~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~--~~~~~  240 (357)
                      |||.++....   ....+++|||+|+ |.+|++++|+|+..|++|+++++++++.+.+++ +|++++++.++.  +.+..
T Consensus       130 ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~  208 (326)
T cd08289         130 TAALSIHRLEENGLTPEQGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYLKK-LGAKEVIPREELQEESIKP  208 (326)
T ss_pred             HHHHHHHHHHhcCCCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHHHH-cCCCEEEcchhHHHHHHHh
Confidence            9998875432   2345789999987 999999999999999999999999999988876 999998887653  22222


Q ss_pred             hh-CCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCC-cccchHHHhhccceEEEEeecC--HHHHHHHHHHHHh-
Q 018382          241 AA-DSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTP-MQFLTPMVMLGRKAITGSFIGS--MKETKEMLEFCRE-  315 (357)
Q Consensus       241 ~~-~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~~--~~~~~~~~~~~~~-  315 (357)
                      .. .++|++||++|+. .+..++++++++|+++.+|..... ...+...++.++.++.+.....  ......+++.+.+ 
T Consensus       209 ~~~~~~d~vld~~g~~-~~~~~~~~l~~~G~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (326)
T cd08289         209 LEKQRWAGAVDPVGGK-TLAYLLSTLQYGGSVAVSGLTGGGEVETTVFPFILRGVNLLGIDSVECPMELRRRIWRRLATD  287 (326)
T ss_pred             hccCCcCEEEECCcHH-HHHHHHHHhhcCCEEEEEeecCCCCCCcchhhhhhccceEEEEEeEecCchHHHHHHHHHHhh
Confidence            22 3799999999986 889999999999999999875332 2333455667888988875421  2223334443332 


Q ss_pred             ---cCCCccE-EEeecccHHHHHHHHHcCCccEEEEEec
Q 018382          316 ---KGVTSMI-EVIKMDYVNKAFERLEKNDVRYRFVVDV  350 (357)
Q Consensus       316 ---~~l~~~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~  350 (357)
                         ..+...+ ++|+++++++||+.+.+++..||+++++
T Consensus       288 ~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~  326 (326)
T cd08289         288 LKPTQLLNEIKQEITLDELPEALKQILQGRVTGRTVVKL  326 (326)
T ss_pred             cCccccccccceEeeHHHHHHHHHHHhcCcccceEEEeC
Confidence               2222345 8999999999999999999999999864

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=100.00  E-value=3.1e-35  Score=271.00  Aligned_cols=299  Identities=25%  Similarity=0.344  Sum_probs=246.8

Q ss_pred             eeeehc--cCC--CCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCC-CCCCCCccCccccEEEEEeCCCCCC
Q 018382           10 TIGWAA--KDP--SGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLG-MSNYPMVPGHEVVGEVKEVGSEVSN   84 (357)
Q Consensus        10 ~~~~~~--~~~--~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~-~~~~p~~lG~e~~G~V~~vG~~v~~   84 (357)
                      |++|..  .++  ++++++++++.|.+.++|++||+.++++|++|++...|.++ ...+|.++|+|++|+|+.+|+++++
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~p~~~g~e~~G~v~~vG~~v~~   81 (329)
T cd08250           2 FRKLVVHRLSPNFREATSIVDVPVPLPGPGEVLVKNRFVGINASDINFTAGRYDPGVKPPFDCGFEGVGEVVAVGEGVTD   81 (329)
T ss_pred             ceEEEeccCCCCcccCceEEecCCCCCCCCEEEEEEEEEecCHHHHHHHhCCCCCCCCCCcccCceeEEEEEEECCCCCC
Confidence            455554  333  56788899999999999999999999999999999888664 2457889999999999999999999


Q ss_pred             CCCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccch
Q 018382           85 FKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCA  164 (357)
Q Consensus        85 ~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~  164 (357)
                      |++||+|++.                                    ..|+|++|+.++.+.++++|++  +.+++.++.+
T Consensus        82 ~~~Gd~V~~~------------------------------------~~g~~~s~~~v~~~~~~~ip~~--~~~~a~l~~~  123 (329)
T cd08250          82 FKVGDAVATM------------------------------------SFGAFAEYQVVPARHAVPVPEL--KPEVLPLLVS  123 (329)
T ss_pred             CCCCCEEEEe------------------------------------cCcceeEEEEechHHeEECCCC--cchhhhcccH
Confidence            9999999753                                    3689999999999999999997  4577889999


Q ss_pred             hhhhhhhhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhH---HHH
Q 018382          165 GVTVFSPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATR---MQE  240 (357)
Q Consensus       165 ~~ta~~~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~---~~~  240 (357)
                      +.+||+++.....++++++|+|+|+ |.+|++++++++..|++|+++++++++.+.+++ +|++++++.+..+.   +..
T Consensus       124 ~~ta~~~l~~~~~~~~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~~  202 (329)
T cd08250         124 GLTASIALEEVGEMKSGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFLKS-LGCDRPINYKTEDLGEVLKK  202 (329)
T ss_pred             HHHHHHHHHHhcCCCCCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHHHH-cCCceEEeCCCccHHHHHHH
Confidence            9999999988777899999999986 999999999999999999999999888888866 99988887665432   222


Q ss_pred             hh-CCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCC-----------cccchHHHhhccceEEEEeecC-----H
Q 018382          241 AA-DSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTP-----------MQFLTPMVMLGRKAITGSFIGS-----M  303 (357)
Q Consensus       241 ~~-~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-----------~~~~~~~~~~~~~~i~g~~~~~-----~  303 (357)
                      .. +++|++||++|+. .+..++++++++|+++.+|.....           ..+. ...+.++.++.++....     .
T Consensus       203 ~~~~~vd~v~~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  280 (329)
T cd08250         203 EYPKGVDVVYESVGGE-MFDTCVDNLALKGRLIVIGFISGYQSGTGPSPVKGATLP-PKLLAKSASVRGFFLPHYAKLIP  280 (329)
T ss_pred             hcCCCCeEEEECCcHH-HHHHHHHHhccCCeEEEEecccCCcccCccccccccccc-HHHhhcCceEEEEEhHHHHHHHH
Confidence            22 3799999999986 888999999999999999865432           1122 23456788888887643     2


Q ss_pred             HHHHHHHHHHHhcCCCcc--E-EEeecccHHHHHHHHHcCCccEEEEEe
Q 018382          304 KETKEMLEFCREKGVTSM--I-EVIKMDYVNKAFERLEKNDVRYRFVVD  349 (357)
Q Consensus       304 ~~~~~~~~~~~~~~l~~~--i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~  349 (357)
                      +.+.++++++.++.+++.  . +.|+++++++|++.+++++..||++++
T Consensus       281 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvv~  329 (329)
T cd08250         281 QHLDRLLQLYQRGKLVCEVDPTRFRGLESVADAVDYLYSGKNIGKVVVE  329 (329)
T ss_pred             HHHHHHHHHHHCCCeeeeECCccccCHHHHHHHHHHHHcCCCCceEEeC
Confidence            456788889999988873  2 569999999999999998888998874

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=100.00  E-value=4e-35  Score=268.83  Aligned_cols=296  Identities=24%  Similarity=0.283  Sum_probs=241.0

Q ss_pred             CCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCCCCEEEEccccCC
Q 018382           20 GILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVGVLVGC   99 (357)
Q Consensus        20 ~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~   99 (357)
                      ..+.+.+.+.|.+.++||+||++++++|++|+....|..+....|.++|+|++|+|+++|.  ..+++||+|+...... 
T Consensus        13 ~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~--~~~~~Gd~V~~~~~~~-   89 (320)
T cd08243          13 EVLKLREIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSPSVKFPRVLGIEAVGEVEEAPG--GTFTPGQRVATAMGGM-   89 (320)
T ss_pred             cceEEeecCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCccccceeEEEEEEecC--CCCCCCCEEEEecCCC-
Confidence            4566778888889999999999999999999999888765455678899999999999995  5799999997542100 


Q ss_pred             CCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhhhhhhhhccCCCC
Q 018382          100 CRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQ  179 (357)
Q Consensus       100 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~  179 (357)
                                                  +...+|+|++|+.++...++++|+++++++++++++++.+||.++.....++
T Consensus        90 ----------------------------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~  141 (320)
T cd08243          90 ----------------------------GRTFDGSYAEYTLVPNEQVYAIDSDLSWAELAALPETYYTAWGSLFRSLGLQ  141 (320)
T ss_pred             ----------------------------CCCCCcccceEEEcCHHHcEeCCCCCCHHHHHhcchHHHHHHHHHHHhcCCC
Confidence                                        1235699999999999999999999999999999999999999998888779


Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCC--hhHHHHhhCCccEEEEcCCCCC
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSD--ATRMQEAADSLDYIIDTVPANH  256 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~--~~~~~~~~~~~d~v~d~~g~~~  256 (357)
                      ++++|||+|+ |.+|++++|+|+..|++|+++++++++.+.+.+ +|++++++...  .+.+....+++|+++|++++. 
T Consensus       142 ~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~i~~~~~~~d~vl~~~~~~-  219 (320)
T cd08243         142 PGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALLKE-LGADEVVIDDGAIAEQLRAAPGGFDKVLELVGTA-  219 (320)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-cCCcEEEecCccHHHHHHHhCCCceEEEECCChH-
Confidence            9999999987 999999999999999999999999998888866 99988875432  122333334799999999986 


Q ss_pred             ChHHHHhccccCCeEEEEccCCCCcc---cchHHH--hhccceEEEEeecC--HHHHHHHHHHHHhcCCCccE-EEeecc
Q 018382          257 PLEPYLSLLKLDGKLILTGVINTPMQ---FLTPMV--MLGRKAITGSFIGS--MKETKEMLEFCREKGVTSMI-EVIKMD  328 (357)
Q Consensus       257 ~~~~~~~~l~~~G~~v~~g~~~~~~~---~~~~~~--~~~~~~i~g~~~~~--~~~~~~~~~~~~~~~l~~~i-~~~~~~  328 (357)
                      .+..++++++++|+++.+|.......   ......  ..++.++.+.....  .+.++++++++.++.+++.. +.|+++
T Consensus       220 ~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  299 (320)
T cd08243         220 TLKDSLRHLRPGGIVCMTGLLGGQWTLEDFNPMDDIPSGVNLTLTGSSSGDVPQTPLQELFDFVAAGHLDIPPSKVFTFD  299 (320)
T ss_pred             HHHHHHHHhccCCEEEEEccCCCCcccCCcchhhhhhhccceEEEecchhhhhHHHHHHHHHHHHCCceecccccEEcHH
Confidence            88999999999999999986433211   111222  24566666665432  24578889999999988755 899999


Q ss_pred             cHHHHHHHHHcCCccEEEEE
Q 018382          329 YVNKAFERLEKNDVRYRFVV  348 (357)
Q Consensus       329 ~~~~a~~~~~~~~~~Gkvvi  348 (357)
                      ++++|++.+++++..||+++
T Consensus       300 ~~~~a~~~~~~~~~~~kvvv  319 (320)
T cd08243         300 EIVEAHAYMESNRAFGKVVV  319 (320)
T ss_pred             HHHHHHHHHHhCCCCCcEEe
Confidence            99999999999888899876

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08249 enoyl_reductase_like enoyl_reductase_like

Probab=100.00  E-value=1.6e-35  Score=273.96  Aligned_cols=307  Identities=25%  Similarity=0.308  Sum_probs=241.0

Q ss_pred             eeehccCC-CCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCCCC
Q 018382           11 IGWAAKDP-SGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGD   89 (357)
Q Consensus        11 ~~~~~~~~-~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd   89 (357)
                      ++++...+ ++.+++++++.|+|+++||+||+.++++|++|+....+.. ....|.++|+|++|+|+.+|++++.|++||
T Consensus         2 ~a~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~-~~~~~~~~g~e~~G~v~~vG~~v~~~~~Gd   80 (339)
T cd08249           2 KAAVLTGPGGGLLVVVDVPVPKPGPDEVLVKVKAVALNPVDWKHQDYGF-IPSYPAILGCDFAGTVVEVGSGVTRFKVGD   80 (339)
T ss_pred             ceEEeccCCCCcccccCCCCCCCCCCEEEEEEEEEEcCchheeeeeccc-ccCCCceeeeeeeEEEEEeCCCcCcCCCCC
Confidence            45555432 4778899999999999999999999999999998876654 123567899999999999999999999999


Q ss_pred             EEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhhhh
Q 018382           90 KVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVF  169 (357)
Q Consensus        90 ~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~  169 (357)
                      +|+..+... |+                          +...+|+|++|++++.+.++++|+++++++++.+++.+.+||
T Consensus        81 ~V~~~~~~~-~~--------------------------~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~  133 (339)
T cd08249          81 RVAGFVHGG-NP--------------------------NDPRNGAFQEYVVADADLTAKIPDNISFEEAATLPVGLVTAA  133 (339)
T ss_pred             EEEEEeccc-cC--------------------------CCCCCCcccceEEechhheEECCCCCCHHHceecchHHHHHH
Confidence            997653210 00                          123579999999999999999999999999999999999999


Q ss_pred             hhhhccCCC----------CCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHH
Q 018382          170 SPLSHFGLK----------QSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRM  238 (357)
Q Consensus       170 ~~l~~~~~~----------~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~  238 (357)
                      +++.....+          +++++|+|+|+ |.+|++++++|+..|++|+.++ ++++.+.+++ +|++++++.++.+..
T Consensus       134 ~~l~~~~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~a~~~G~~v~~~~-~~~~~~~~~~-~g~~~v~~~~~~~~~  211 (339)
T cd08249         134 LALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGYKVITTA-SPKNFDLVKS-LGADAVFDYHDPDVV  211 (339)
T ss_pred             HHHhccccCCCCCCCCCCCCCCCEEEEEcChhHHHHHHHHHHHHcCCeEEEEE-CcccHHHHHh-cCCCEEEECCCchHH
Confidence            998766543          68999999997 9999999999999999999888 5577777766 999999988765443


Q ss_pred             HHh---h-CCccEEEEcCCCCCChHHHHhcccc--CCeEEEEccCCCCcccchHHHhhccceEEEEee---------cCH
Q 018382          239 QEA---A-DSLDYIIDTVPANHPLEPYLSLLKL--DGKLILTGVINTPMQFLTPMVMLGRKAITGSFI---------GSM  303 (357)
Q Consensus       239 ~~~---~-~~~d~v~d~~g~~~~~~~~~~~l~~--~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~---------~~~  303 (357)
                      +.+   . +++|++||++|....+..+++++++  +|+++.++.......+... .  ....+.....         ...
T Consensus       212 ~~l~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~g~~v~~g~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~  288 (339)
T cd08249         212 EDIRAATGGKLRYALDCISTPESAQLCAEALGRSGGGKLVSLLPVPEETEPRKG-V--KVKFVLGYTVFGEIPEDREFGE  288 (339)
T ss_pred             HHHHHhcCCCeeEEEEeeccchHHHHHHHHHhccCCCEEEEecCCCccccCCCC-c--eEEEEEeeeecccccccccchH
Confidence            333   2 3799999999984488999999999  9999999876432211110 0  1111111111         112


Q ss_pred             HHHHHHHHHHHhcCCCccE-EEee--cccHHHHHHHHHcCC-ccEEEEEec
Q 018382          304 KETKEMLEFCREKGVTSMI-EVIK--MDYVNKAFERLEKND-VRYRFVVDV  350 (357)
Q Consensus       304 ~~~~~~~~~~~~~~l~~~i-~~~~--~~~~~~a~~~~~~~~-~~Gkvvi~~  350 (357)
                      ..+..+++++.++.+.+.. .+++  ++++++||+.+.+++ ..||+++++
T Consensus       289 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~kvvv~~  339 (339)
T cd08249         289 VFWKYLPELLEEGKLKPHPVRVVEGGLEGVQEGLDLLRKGKVSGEKLVVRL  339 (339)
T ss_pred             HHHHHHHHHHHcCCccCCCceecCCcHHHHHHHHHHHHCCCccceEEEEeC
Confidence            4567788899999988754 7888  999999999999999 889999875

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de

>cd08252 AL_MDR Arginate lyase and other MDR family members

Probab=100.00  E-value=1.5e-34  Score=267.24  Aligned_cols=293  Identities=21%  Similarity=0.256  Sum_probs=240.5

Q ss_pred             cceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCCCCEEEEccccCCCC
Q 018382           22 LSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVGVLVGCCR  101 (357)
Q Consensus        22 ~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~g  101 (357)
                      ++.++++.|.+.++||+||+.++++|++|+..+.+..+....|.++|||++|+|+++|++++.|++||+|+....     
T Consensus        18 ~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~-----   92 (336)
T cd08252          18 LIDIELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAPVPGQPKILGWDASGVVEAVGSEVTLFKVGDEVYYAGD-----   92 (336)
T ss_pred             eeEccCCCCCCCCCEEEEEEEEEEcCHHHHHHHcCCCCCCCCCcccccceEEEEEEcCCCCCCCCCCCEEEEcCC-----
Confidence            556678888899999999999999999999988776654456778999999999999999999999999964310     


Q ss_pred             CCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhhhhhhhhccCCCCC-
Q 018382          102 NCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQS-  180 (357)
Q Consensus       102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~-  180 (357)
                                                 ....|+|++|+.++.+.++++|+++++++++.+++.+.+||.++.....+.+ 
T Consensus        93 ---------------------------~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~  145 (336)
T cd08252          93 ---------------------------ITRPGSNAEYQLVDERIVGHKPKSLSFAEAAALPLTSLTAWEALFDRLGISED  145 (336)
T ss_pred             ---------------------------CCCCccceEEEEEchHHeeeCCCCCCHHHhhhhhhHHHHHHHHHHHhcCCCCC
Confidence                                       1246899999999999999999999999999999999999999877666676 


Q ss_pred             ----CCeEEEEec-ChHHHHHHHHHHHcC-CeEEEEeCCcHHHHHHHHhcCCcEEEcCCCh--hHHHHhh-CCccEEEEc
Q 018382          181 ----GLRGGILGL-GGVGHMGVLIAKAMG-HHVTVISSSDKKRVEAMEHLGADQYLVSSDA--TRMQEAA-DSLDYIIDT  251 (357)
Q Consensus       181 ----~~~VlI~G~-g~~G~~ai~la~~~g-~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~--~~~~~~~-~~~d~v~d~  251 (357)
                          +++|+|+|+ |++|++++++++..| ++|+++++++++.+.+.+ +|++++++.+..  +.+.... +++|++||+
T Consensus       146 ~~~~g~~vlV~g~~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~i~~~~~~~~d~vl~~  224 (336)
T cd08252         146 AENEGKTLLIIGGAGGVGSIAIQLAKQLTGLTVIATASRPESIAWVKE-LGADHVINHHQDLAEQLEALGIEPVDYIFCL  224 (336)
T ss_pred             cCCCCCEEEEEcCCchHHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh-cCCcEEEeCCccHHHHHHhhCCCCCCEEEEc
Confidence                999999985 999999999999999 899999999889888876 999999887641  2222222 379999999


Q ss_pred             CCCCCChHHHHhccccCCeEEEEccCCCCcccchHHHhhccceEEEEeecC------------HHHHHHHHHHHHhcCCC
Q 018382          252 VPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGS------------MKETKEMLEFCREKGVT  319 (357)
Q Consensus       252 ~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~------------~~~~~~~~~~~~~~~l~  319 (357)
                      ++....+..++++++++|+++.+|...  ..++...+..++.++.+.....            .+.++++++++.++.+.
T Consensus       225 ~~~~~~~~~~~~~l~~~g~~v~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  302 (336)
T cd08252         225 TDTDQHWDAMAELIAPQGHICLIVDPQ--EPLDLGPLKSKSASFHWEFMFTRSMFQTPDMIEQHEILNEVADLLDAGKLK  302 (336)
T ss_pred             cCcHHHHHHHHHHhcCCCEEEEecCCC--CcccchhhhcccceEEEEEeeccccccccchhhHHHHHHHHHHHHHCCCEe
Confidence            996447889999999999999998653  2333334445677777655432            13467888999999888


Q ss_pred             ccE----EEeecccHHHHHHHHHcCCccEEEEEe
Q 018382          320 SMI----EVIKMDYVNKAFERLEKNDVRYRFVVD  349 (357)
Q Consensus       320 ~~i----~~~~~~~~~~a~~~~~~~~~~Gkvvi~  349 (357)
                      +.+    +.++++++++|++.+++++..||++++
T Consensus       303 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~  336 (336)
T cd08252         303 TTLTETLGPINAENLREAHALLESGKTIGKIVLE  336 (336)
T ss_pred             cceeeeecCCCHHHHHHHHHHHHcCCccceEEeC
Confidence            643    357999999999999999999999864

This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=100.00  E-value=1.1e-34  Score=269.76  Aligned_cols=293  Identities=27%  Similarity=0.322  Sum_probs=233.7

Q ss_pred             cceeeeecCCC-CCCcEEEEEeeeccccchHHHHhcCCC---------------CCCCCCccCccccEEEEEeCCCCCCC
Q 018382           22 LSPYTYTLRNT-GAEDVYIKVLYCGICHTDIHQIKNDLG---------------MSNYPMVPGHEVVGEVKEVGSEVSNF   85 (357)
Q Consensus        22 ~~~~~~~~p~~-~~~evlV~v~~~~~~~~D~~~~~g~~~---------------~~~~p~~lG~e~~G~V~~vG~~v~~~   85 (357)
                      +++++++.|+| .++||+||+.++++|++|+.+..|...               ....|.++|||++|+|+++|+++++|
T Consensus        16 ~~~~~~~~p~~~~~~ev~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~G~e~~G~v~~vG~~v~~~   95 (350)
T cd08248          16 LLLENARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFPLTLGRDCSGVVVDIGSGVKSF   95 (350)
T ss_pred             eeecccCCCCCCCCCeEEEEEEEEecCchhHHHHcCCccchhhhhhccccccccCCCCCeeecceeEEEEEecCCCcccC
Confidence            78889999999 499999999999999999998877421               23557899999999999999999999


Q ss_pred             CCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchh
Q 018382           86 KVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAG  165 (357)
Q Consensus        86 ~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~  165 (357)
                      ++||+|++.+.                                ....|+|++|+.++++.++++|+++++++++.+++.+
T Consensus        96 ~~Gd~V~~~~~--------------------------------~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~  143 (350)
T cd08248          96 EIGDEVWGAVP--------------------------------PWSQGTHAEYVVVPENEVSKKPKNLSHEEAASLPYAG  143 (350)
T ss_pred             CCCCEEEEecC--------------------------------CCCCccceeEEEecHHHeecCCCCCCHHHHhhchhHH
Confidence            99999975421                                1146999999999999999999999999999999999


Q ss_pred             hhhhhhhhccCCCCC----CCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHH
Q 018382          166 VTVFSPLSHFGLKQS----GLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQE  240 (357)
Q Consensus       166 ~ta~~~l~~~~~~~~----~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~  240 (357)
                      .+||+++.+...+.+    |++|+|+|+ |++|++++++++..|++|+++.++ ++.+.+++ +|.+++++..+.+..++
T Consensus       144 ~ta~~~l~~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~-~~~~~~~~-~g~~~~~~~~~~~~~~~  221 (350)
T cd08248         144 LTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCST-DAIPLVKS-LGADDVIDYNNEDFEEE  221 (350)
T ss_pred             HHHHHHHHHhccCCCccCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCc-chHHHHHH-hCCceEEECCChhHHHH
Confidence            999999877776554    999999986 999999999999999999988865 45555555 99988888776555444


Q ss_pred             hh--CCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCC--c--cc-----chH-HHhh-------ccceE-EEEee
Q 018382          241 AA--DSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTP--M--QF-----LTP-MVML-------GRKAI-TGSFI  300 (357)
Q Consensus       241 ~~--~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~--~~-----~~~-~~~~-------~~~~i-~g~~~  300 (357)
                      +.  +++|++||++|.. ....++++++++|+++.++.....  .  ..     ... .+..       +...+ .+...
T Consensus       222 l~~~~~vd~vi~~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  300 (350)
T cd08248         222 LTERGKFDVILDTVGGD-TEKWALKLLKKGGTYVTLVSPLLKNTDKLGLVGGMLKSAVDLLKKNVKSLLKGSHYRWGFFS  300 (350)
T ss_pred             HHhcCCCCEEEECCChH-HHHHHHHHhccCCEEEEecCCcccccccccccchhhhhHHHHHHHHHHHHhcCCCeeEEEEC
Confidence            43  3799999999988 888999999999999998754211  0  00     000 0110       11111 11122


Q ss_pred             cCHHHHHHHHHHHHhcCCCccE-EEeecccHHHHHHHHHcCCccEEEEEe
Q 018382          301 GSMKETKEMLEFCREKGVTSMI-EVIKMDYVNKAFERLEKNDVRYRFVVD  349 (357)
Q Consensus       301 ~~~~~~~~~~~~~~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~  349 (357)
                      .....+..+++++.++.+.+.+ +.|+++++.+|++.+.+++..+|++++
T Consensus       301 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~  350 (350)
T cd08248         301 PSGSALDELAKLVEDGKIKPVIDKVFPFEEVPEAYEKVESGHARGKTVIK  350 (350)
T ss_pred             CCHHHHHHHHHHHhCCCEecccceeecHHHHHHHHHHHhcCCCceEEEeC
Confidence            2346788999999999988766 899999999999999988888898863

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=2.2e-34  Score=263.29  Aligned_cols=291  Identities=20%  Similarity=0.277  Sum_probs=235.9

Q ss_pred             CCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHH-hcCCCC--CCCCCccCccccEEEEEeCCCCCCCCCCCEEEEc
Q 018382           18 PSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQI-KNDLGM--SNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVG   94 (357)
Q Consensus        18 ~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~-~g~~~~--~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~   94 (357)
                      +++.+++.+++.|++.++||+||+.++++|++|++.+ .|..+.  ...|.++|+|++|+|+++|+++++|++||+|+..
T Consensus         3 ~~~~~~~~~~~~~~l~~~ev~v~v~~~~i~~~d~~~~~~g~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~   82 (312)
T cd08269           3 GPGRFEVEEHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGRVVALGPGVRGLAVGDRVAGL   82 (312)
T ss_pred             CCCeeEEEECCCCCCCCCeEEEEEEEeeecccchHHHccCCCCcccCCCCcccceeeEEEEEEECCCCcCCCCCCEEEEe
Confidence            3457889999999999999999999999999999987 665431  2247789999999999999999999999999753


Q ss_pred             cccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhhhhhhhhc
Q 018382           95 VLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSH  174 (357)
Q Consensus        95 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~  174 (357)
                                                          ..|+|++|+.++.+.++++|+++  ..++....++.++|+++. 
T Consensus        83 ------------------------------------~~g~~~~~~~v~~~~~~~lP~~~--~~~~~~~~~~~~a~~~~~-  123 (312)
T cd08269          83 ------------------------------------SGGAFAEYDLADADHAVPLPSLL--DGQAFPGEPLGCALNVFR-  123 (312)
T ss_pred             ------------------------------------cCCcceeeEEEchhheEECCCch--hhhHHhhhhHHHHHHHHH-
Confidence                                                35889999999999999999998  233322377788998887 


Q ss_pred             cCCCCCCCeEEEEecChHHHHHHHHHHHcCCe-EEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHH---hh--CCccEE
Q 018382          175 FGLKQSGLRGGILGLGGVGHMGVLIAKAMGHH-VTVISSSDKKRVEAMEHLGADQYLVSSDATRMQE---AA--DSLDYI  248 (357)
Q Consensus       175 ~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~-V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~---~~--~~~d~v  248 (357)
                      ...++++++|+|+|+|.+|.+++|+|+..|++ |+++++++++.+.+.+ +|++++++.+..+..+.   ..  .++|++
T Consensus       124 ~~~~~~~~~vlI~g~g~vg~~~~~la~~~g~~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~l~~~~~~~~vd~v  202 (312)
T cd08269         124 RGWIRAGKTVAVIGAGFIGLLFLQLAAAAGARRVIAIDRRPARLALARE-LGATEVVTDDSEAIVERVRELTGGAGADVV  202 (312)
T ss_pred             hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHH-hCCceEecCCCcCHHHHHHHHcCCCCCCEE
Confidence            56668999999998899999999999999998 9999988888776665 99998888665443333   33  379999


Q ss_pred             EEcCCCCCChHHHHhccccCCeEEEEccCC-CCcccchHHHhhccceEEEEeecCH----HHHHHHHHHHHhcCCCc--c
Q 018382          249 IDTVPANHPLEPYLSLLKLDGKLILTGVIN-TPMQFLTPMVMLGRKAITGSFIGSM----KETKEMLEFCREKGVTS--M  321 (357)
Q Consensus       249 ~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~g~~~~~~----~~~~~~~~~~~~~~l~~--~  321 (357)
                      |||.|.......++++++++|+++.+|... ....++...+..++.++.++.....    +.++.++++++++.+++  .
T Consensus       203 ld~~g~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  282 (312)
T cd08269         203 IEAVGHQWPLDLAGELVAERGRLVIFGYHQDGPRPVPFQTWNWKGIDLINAVERDPRIGLEGMREAVKLIADGRLDLGSL  282 (312)
T ss_pred             EECCCCHHHHHHHHHHhccCCEEEEEccCCCCCcccCHHHHhhcCCEEEEecccCccchhhHHHHHHHHHHcCCCCchhh
Confidence            999987657888999999999999998653 2233444455677777777654332    57889999999999886  3


Q ss_pred             E-EEeecccHHHHHHHHHcCCc-cEEEEE
Q 018382          322 I-EVIKMDYVNKAFERLEKNDV-RYRFVV  348 (357)
Q Consensus       322 i-~~~~~~~~~~a~~~~~~~~~-~Gkvvi  348 (357)
                      + ++|+++++++|++.+++++. .+|+++
T Consensus       283 ~~~~~~~~~~~~a~~~~~~~~~~~~~~~~  311 (312)
T cd08269         283 LTHEFPLEELGDAFEAARRRPDGFIKGVI  311 (312)
T ss_pred             eeeeecHHHHHHHHHHHHhCCCCceEEEe
Confidence            5 88999999999999998865 588876

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=100.00  E-value=2.8e-34  Score=263.33  Aligned_cols=309  Identities=23%  Similarity=0.291  Sum_probs=250.1

Q ss_pred             eeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCC-CCCCCCccCccccEEEEEeCCCCCCCCCC
Q 018382           10 TIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLG-MSNYPMVPGHEVVGEVKEVGSEVSNFKVG   88 (357)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~-~~~~p~~lG~e~~G~V~~vG~~v~~~~~G   88 (357)
                      ..++..++.+..+++.+++.|.+.+++++|++.++++|++|+....|..+ ....|.++|||++|+|+++|+++++|++|
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~G   82 (325)
T cd08253           3 AIRYHEFGAPDVLRLGDLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPGLPPLPYVPGSDGAGVVEAVGEGVDGLKVG   82 (325)
T ss_pred             eEEEcccCCcccceeeecCCCCCCCCEEEEEEEEEecChhHhhhccCCCCCCCCCCeecccceEEEEEeeCCCCCCCCCC
Confidence            33444343445688889999999999999999999999999998877654 33567889999999999999999999999


Q ss_pred             CEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhhh
Q 018382           89 DKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTV  168 (357)
Q Consensus        89 d~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta  168 (357)
                      |+|+......                              ....|++++|+.++.+.++++|+++++++++.+++.+.+|
T Consensus        83 d~v~~~~~~~------------------------------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~~a  132 (325)
T cd08253          83 DRVWLTNLGW------------------------------GRRQGTAAEYVVVPADQLVPLPDGVSFEQGAALGIPALTA  132 (325)
T ss_pred             CEEEEecccc------------------------------CCCCcceeeEEEecHHHcEeCCCCCCHHHHhhhhhHHHHH
Confidence            9997642100                              0146899999999999999999999999999999999999


Q ss_pred             hhhhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHh---h--
Q 018382          169 FSPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEA---A--  242 (357)
Q Consensus       169 ~~~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~---~--  242 (357)
                      |+++.....+.++++++|+|+ |++|++++++++..|++|+++++++++.+.+.+ +|++++++.+..+..+.+   .  
T Consensus       133 ~~~l~~~~~~~~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~  211 (325)
T cd08253         133 YRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVRQ-AGADAVFNYRAEDLADRILAATAG  211 (325)
T ss_pred             HHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cCCCEEEeCCCcCHHHHHHHHcCC
Confidence            999988777789999999986 999999999999999999999999988888876 999888887665443332   2  


Q ss_pred             CCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCcccchHHHhhccceEEEEeecCH------HHHHHHHHHHHhc
Q 018382          243 DSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSM------KETKEMLEFCREK  316 (357)
Q Consensus       243 ~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~------~~~~~~~~~~~~~  316 (357)
                      +++|+++++++.. .....+++++++|+++.++.......+....++.++.++.+...+..      +.++.+.+++.++
T Consensus       212 ~~~d~vi~~~~~~-~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (325)
T cd08253         212 QGVDVIIEVLANV-NLAKDLDVLAPGGRIVVYGSGGLRGTIPINPLMAKEASIRGVLLYTATPEERAAAAEAIAAGLADG  290 (325)
T ss_pred             CceEEEEECCchH-HHHHHHHhhCCCCEEEEEeecCCcCCCChhHHHhcCceEEeeehhhcCHHHHHHHHHHHHHHHHCC
Confidence            3799999999987 67888999999999999987542233344444566777766654321      2345566777788


Q ss_pred             CCCccE-EEeecccHHHHHHHHHcCCccEEEEEec
Q 018382          317 GVTSMI-EVIKMDYVNKAFERLEKNDVRYRFVVDV  350 (357)
Q Consensus       317 ~l~~~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~  350 (357)
                      .+++.. +.|++++++++++.+.++...||+++++
T Consensus       291 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~  325 (325)
T cd08253         291 ALRPVIAREYPLEEAAAAHEAVESGGAIGKVVLDP  325 (325)
T ss_pred             CccCccccEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence            887765 8999999999999999999999999864

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=100.00  E-value=2.8e-34  Score=245.92  Aligned_cols=293  Identities=22%  Similarity=0.232  Sum_probs=239.1

Q ss_pred             CCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeC--CCCCCCCCCCEEEEcccc
Q 018382           20 GILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVG--SEVSNFKVGDKVGVGVLV   97 (357)
Q Consensus        20 ~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG--~~v~~~~~Gd~V~~~~~~   97 (357)
                      .+|+++|.++|+|++||||+|+.|.+++|. ...+....+....|.-+|...+|.++...  |+...|++||.|.     
T Consensus        25 d~F~lee~~vp~p~~GqvLl~~~ylS~DPy-mRgrm~d~~SY~~P~~lG~~~~gg~V~~Vv~S~~~~f~~GD~V~-----   98 (340)
T COG2130          25 DDFRLEEVDVPEPGEGQVLLRTLYLSLDPY-MRGRMSDAPSYAPPVELGEVMVGGTVAKVVASNHPGFQPGDIVV-----   98 (340)
T ss_pred             CCceeEeccCCCCCcCceEEEEEEeccCHH-HeecccCCcccCCCcCCCceeECCeeEEEEecCCCCCCCCCEEE-----
Confidence            568999999999999999999999999993 22222233344456667766655444333  5577799999995     


Q ss_pred             CCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCcccc--ccccchhhhhhhhhhcc
Q 018382           98 GCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQA--APLLCAGVTVFSPLSHF  175 (357)
Q Consensus        98 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~a--a~~~~~~~ta~~~l~~~  175 (357)
                                                       ...+|++|.+++++.+.|++++.-...+  ..+.-+..|||.+|.+.
T Consensus        99 ---------------------------------~~~GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLGmpG~TAY~gLl~i  145 (340)
T COG2130          99 ---------------------------------GVSGWQEYAISDGEGLRKLDPSPAPLSAYLGVLGMPGLTAYFGLLDI  145 (340)
T ss_pred             ---------------------------------ecccceEEEeechhhceecCCCCCCcchHHhhcCCchHHHHHHHHHh
Confidence                                             3458999999999999999865433222  25777889999999999


Q ss_pred             CCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhC----CccEEEE
Q 018382          176 GLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAAD----SLDYIID  250 (357)
Q Consensus       176 ~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~----~~d~v~d  250 (357)
                      +..++|++|+|-|| |++|..+.|+||..|++|+.++.+++|.+++.+.+|.|.++|++.++..+.+.+    ++|+.||
T Consensus       146 gqpk~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~lGfD~~idyk~~d~~~~L~~a~P~GIDvyfe  225 (340)
T COG2130         146 GQPKAGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELGFDAGIDYKAEDFAQALKEACPKGIDVYFE  225 (340)
T ss_pred             cCCCCCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhcCCceeeecCcccHHHHHHHHCCCCeEEEEE
Confidence            99999999999986 999999999999999999999999999999999899999999999877666653    9999999


Q ss_pred             cCCCCCChHHHHhccccCCeEEEEccCCCC------c-ccchHHHhhccceEEEEeec-CH-----HHHHHHHHHHHhcC
Q 018382          251 TVPANHPLEPYLSLLKLDGKLILTGVINTP------M-QFLTPMVMLGRKAITGSFIG-SM-----KETKEMLEFCREKG  317 (357)
Q Consensus       251 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~------~-~~~~~~~~~~~~~i~g~~~~-~~-----~~~~~~~~~~~~~~  317 (357)
                      ++|+. .++..+..|+..+|++.+|..+..      . .-....++.+++++.|+... ..     +..+++.+|+.+|+
T Consensus       226 NVGg~-v~DAv~~~ln~~aRi~~CG~IS~YN~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~~~~~~~e~~~~l~~wv~~GK  304 (340)
T COG2130         226 NVGGE-VLDAVLPLLNLFARIPVCGAISQYNAPELPPGPRRLPLLMAKRLRVQGFIVASDYDQRFPEALRELGGWVKEGK  304 (340)
T ss_pred             cCCch-HHHHHHHhhccccceeeeeehhhcCCCCCCCCcchhhHHHhhhheeEEEEechhhhhhhHHHHHHHHHHHHcCc
Confidence            99999 999999999999999999864321      1 12234567788999998872 11     55689999999999


Q ss_pred             CCccEEEe-ecccHHHHHHHHHcCCccEEEEEecCC
Q 018382          318 VTSMIEVI-KMDYVNKAFERLEKNDVRYRFVVDVAG  352 (357)
Q Consensus       318 l~~~i~~~-~~~~~~~a~~~~~~~~~~Gkvvi~~~~  352 (357)
                      |+-...++ .|+.+++||.-|-+++.+||.|+++.+
T Consensus       305 i~~~eti~dGlEnaP~Af~gLl~G~N~GK~vvKv~~  340 (340)
T COG2130         305 IQYRETIVDGLENAPEAFIGLLSGKNFGKLVVKVAD  340 (340)
T ss_pred             eeeEeeehhhhhccHHHHHHHhcCCccceEEEEecC
Confidence            98877544 599999999999999999999999853

>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases

Probab=100.00  E-value=1.4e-33  Score=259.32  Aligned_cols=308  Identities=21%  Similarity=0.258  Sum_probs=242.5

Q ss_pred             eeeehccCC--CCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCC-CCCCCCccCccccEEEEEeCCCCCCCC
Q 018382           10 TIGWAAKDP--SGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLG-MSNYPMVPGHEVVGEVKEVGSEVSNFK   86 (357)
Q Consensus        10 ~~~~~~~~~--~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~-~~~~p~~lG~e~~G~V~~vG~~v~~~~   86 (357)
                      |++++..+.  +..+.++++|.|+|+++||+||+.++++|++|+.+..|..+ ...+|.++|||++|+|++  +++++|+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~   78 (324)
T cd08288           1 FKALVLEKDDGGTSAELRELDESDLPEGDVTVEVHYSTLNYKDGLAITGKGGIVRTFPLVPGIDLAGTVVE--SSSPRFK   78 (324)
T ss_pred             CeeEEEeccCCCcceEEEECCCCCCCCCeEEEEEEEEecCHHHHHHhcCCccccCCCCCccccceEEEEEe--CCCCCCC
Confidence            346665432  23688899999999999999999999999999998877653 224577899999999999  7778899


Q ss_pred             CCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhh
Q 018382           87 VGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGV  166 (357)
Q Consensus        87 ~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~  166 (357)
                      +||+|++...                             ..+....|+|++|+.++.+.++++|+++++++++.+++.++
T Consensus        79 ~Gd~V~~~~~-----------------------------~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~~~~~~~~~~  129 (324)
T cd08288          79 PGDRVVLTGW-----------------------------GVGERHWGGYAQRARVKADWLVPLPEGLSARQAMAIGTAGF  129 (324)
T ss_pred             CCCEEEECCc-----------------------------cCCCCCCCcceeEEEEchHHeeeCCCCCCHHHHhhhhhHHH
Confidence            9999975310                             00112478999999999999999999999999999999999


Q ss_pred             hhhhhhh---ccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhH-HHHh
Q 018382          167 TVFSPLS---HFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATR-MQEA  241 (357)
Q Consensus       167 ta~~~l~---~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~-~~~~  241 (357)
                      +++.++.   ......++++|+|+|+ |++|++++|+|+.+|++|++++.++++.+.+.+ +|+++++++++... +..+
T Consensus       130 ta~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~A~~~G~~vi~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~  208 (324)
T cd08288         130 TAMLCVMALEDHGVTPGDGPVLVTGAAGGVGSVAVALLARLGYEVVASTGRPEEADYLRS-LGASEIIDRAELSEPGRPL  208 (324)
T ss_pred             HHHHHHHHHhhcCcCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHh-cCCCEEEEcchhhHhhhhh
Confidence            9987754   3444236789999987 999999999999999999999999999888866 99999998765332 2223


Q ss_pred             h-CCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCC-CcccchHHHhhccceEEEEeecC------HHHHHHHHHHH
Q 018382          242 A-DSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINT-PMQFLTPMVMLGRKAITGSFIGS------MKETKEMLEFC  313 (357)
Q Consensus       242 ~-~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~------~~~~~~~~~~~  313 (357)
                      . .++|.+||++++. .....+..++.+|+++.+|.... ...+....++.++.++.+.....      .+.+..+.+++
T Consensus       209 ~~~~~~~~~d~~~~~-~~~~~~~~~~~~g~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (324)
T cd08288         209 QKERWAGAVDTVGGH-TLANVLAQTRYGGAVAACGLAGGADLPTTVMPFILRGVTLLGIDSVMAPIERRRAAWARLARDL  287 (324)
T ss_pred             ccCcccEEEECCcHH-HHHHHHHHhcCCCEEEEEEecCCCCCCcchhhhhccccEEEEEEeecccchhhHHHHHHHHHHH
Confidence            2 3689999999985 67778888999999999887532 12233444457888888865321      23456677778


Q ss_pred             HhcCCCccEEEeecccHHHHHHHHHcCCccEEEEEec
Q 018382          314 REKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDV  350 (357)
Q Consensus       314 ~~~~l~~~i~~~~~~~~~~a~~~~~~~~~~Gkvvi~~  350 (357)
                      .++.+.+.++.++++++++|++.+++++..||+++++
T Consensus       288 ~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~~~vvv~~  324 (324)
T cd08288         288 DPALLEALTREIPLADVPDAAEAILAGQVRGRVVVDV  324 (324)
T ss_pred             hcCCccccceeecHHHHHHHHHHHhcCCccCeEEEeC
Confidence            8888866459999999999999999999999999864

Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=100.00  E-value=1.5e-33  Score=258.14  Aligned_cols=302  Identities=26%  Similarity=0.343  Sum_probs=248.1

Q ss_pred             eeeehcc--CCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCC-CCCCCCccCccccEEEEEeCCCCCCCC
Q 018382           10 TIGWAAK--DPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLG-MSNYPMVPGHEVVGEVKEVGSEVSNFK   86 (357)
Q Consensus        10 ~~~~~~~--~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~-~~~~p~~lG~e~~G~V~~vG~~v~~~~   86 (357)
                      |++++..  +.+..+++.+.+.|.+.++|++||+.++++|++|+....|.++ ....|.++|||++|+|+++|+++.+++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~   80 (323)
T cd05276           1 MKAIVIKEPGGPEVLELGEVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLYPPPPGASDILGLEVAGVVVAVGPGVTGWK   80 (323)
T ss_pred             CeEEEEecCCCcccceEEecCCCCCCCCEEEEEEEEeecCHHHHHHhCCCCCCCCCCCCcccceeEEEEEeeCCCCCCCC
Confidence            3455543  2344577778888888999999999999999999998877654 234578899999999999999999999


Q ss_pred             CCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhh
Q 018382           87 VGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGV  166 (357)
Q Consensus        87 ~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~  166 (357)
                      +||+|+..                                   ..+|+|++|+.++.+.++++|+++++++++.++..+.
T Consensus        81 ~Gd~V~~~-----------------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~  125 (323)
T cd05276          81 VGDRVCAL-----------------------------------LAGGGYAEYVVVPAGQLLPVPEGLSLVEAAALPEVFF  125 (323)
T ss_pred             CCCEEEEe-----------------------------------cCCCceeEEEEcCHHHhccCCCCCCHHHHhhchhHHH
Confidence            99999643                                   2358999999999999999999999999999999999


Q ss_pred             hhhhhhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHH---hh
Q 018382          167 TVFSPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQE---AA  242 (357)
Q Consensus       167 ta~~~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~---~~  242 (357)
                      ++|.++.....+.++++|+|+|+ |++|++++++++..|++|+++++++++.+.+.+ +|.+.+++....+....   ..
T Consensus       126 ~a~~~~~~~~~~~~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~  204 (323)
T cd05276         126 TAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEACRA-LGADVAINYRTEDFAEEVKEAT  204 (323)
T ss_pred             HHHHHHHHhcCCCCCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH-cCCCEEEeCCchhHHHHHHHHh
Confidence            99999887777789999999987 999999999999999999999999888888866 99888888766443333   22


Q ss_pred             --CCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCC-cccchHHHhhccceEEEEeecCH----------HHHHHH
Q 018382          243 --DSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTP-MQFLTPMVMLGRKAITGSFIGSM----------KETKEM  309 (357)
Q Consensus       243 --~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~~~----------~~~~~~  309 (357)
                        .++|++|++.|+. .....+++++++|+++.++..... .......++.++.++.++.....          +.+.++
T Consensus       205 ~~~~~d~vi~~~g~~-~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (323)
T cd05276         205 GGRGVDVILDMVGGD-YLARNLRALAPDGRLVLIGLLGGAKAELDLAPLLRKRLTLTGSTLRSRSLEEKAALAAAFREHV  283 (323)
T ss_pred             CCCCeEEEEECCchH-HHHHHHHhhccCCEEEEEecCCCCCCCCchHHHHHhCCeEEEeeccchhhhccHHHHHHHHHHH
Confidence              3799999999987 688899999999999999765332 23344445568888888775432          234667


Q ss_pred             HHHHHhcCCCccE-EEeecccHHHHHHHHHcCCccEEEEE
Q 018382          310 LEFCREKGVTSMI-EVIKMDYVNKAFERLEKNDVRYRFVV  348 (357)
Q Consensus       310 ~~~~~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi  348 (357)
                      ++++.++.+.+.. +.|+++++++|++.+.++...||+++
T Consensus       284 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~  323 (323)
T cd05276         284 WPLFASGRIRPVIDKVFPLEEAAEAHRRMESNEHIGKIVL  323 (323)
T ss_pred             HHHHHCCCccCCcceEEcHHHHHHHHHHHHhCCCcceEeC
Confidence            7888889887766 89999999999999998888888874

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=100.00  E-value=3.2e-33  Score=255.64  Aligned_cols=294  Identities=26%  Similarity=0.290  Sum_probs=242.4

Q ss_pred             CCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCCCCEEEEccccC
Q 018382           19 SGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVGVLVG   98 (357)
Q Consensus        19 ~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~   98 (357)
                      +..+.+.+.+.|.+.++|++|++.++++|++|+.+..+..+. .+|.++|+|++|+|+.+|+++.+|++||+|++..   
T Consensus        11 ~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~~~~~~-~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V~~~~---   86 (320)
T cd05286          11 PEVLEYEDVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYPL-PLPFVLGVEGAGVVEAVGPGVTGFKVGDRVAYAG---   86 (320)
T ss_pred             ccceEEeecCCCCCCCCEEEEEEEEeecCHHHHHHhcCCCCC-CCCccCCcceeEEEEEECCCCCCCCCCCEEEEec---
Confidence            345666677777889999999999999999999998876543 4577899999999999999999999999996430   


Q ss_pred             CCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhhhhhhhhccCCC
Q 018382           99 CCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLK  178 (357)
Q Consensus        99 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~  178 (357)
                                                      ..|+|++|+.++.+.++++|+++++++++.++..+.++|.++.....+
T Consensus        87 --------------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~  134 (320)
T cd05286          87 --------------------------------PPGAYAEYRVVPASRLVKLPDGISDETAAALLLQGLTAHYLLRETYPV  134 (320)
T ss_pred             --------------------------------CCCceeEEEEecHHHceeCCCCCCHHHHhhccchHHHHHHHHHHhcCC
Confidence                                            268899999999999999999999999999999999999998887777


Q ss_pred             CCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHH---Hhh--CCccEEEEcC
Q 018382          179 QSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQ---EAA--DSLDYIIDTV  252 (357)
Q Consensus       179 ~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~---~~~--~~~d~v~d~~  252 (357)
                      .++++|+|+|+ |++|++++++++..|++|+++++++++.+.+++ +|++++++........   ...  .++|++|+|+
T Consensus       135 ~~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~  213 (320)
T cd05286         135 KPGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAELARA-AGADHVINYRDEDFVERVREITGGRGVDVVYDGV  213 (320)
T ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH-CCCCEEEeCCchhHHHHHHHHcCCCCeeEEEECC
Confidence            99999999996 999999999999999999999999999888866 9999888776544333   332  2799999999


Q ss_pred             CCCCChHHHHhccccCCeEEEEccCCCC-cccchHHHhhccceEEEEeec----CH----HHHHHHHHHHHhcCCCccE-
Q 018382          253 PANHPLEPYLSLLKLDGKLILTGVINTP-MQFLTPMVMLGRKAITGSFIG----SM----KETKEMLEFCREKGVTSMI-  322 (357)
Q Consensus       253 g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~----~~----~~~~~~~~~~~~~~l~~~i-  322 (357)
                      ++. ....++++++++|+++.+|..... ..++...+..++.++.+....    ..    +.+..+++++.++.+.+.+ 
T Consensus       214 ~~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  292 (320)
T cd05286         214 GKD-TFEGSLDSLRPRGTLVSFGNASGPVPPFDLLRLSKGSLFLTRPSLFHYIATREELLARAAELFDAVASGKLKVEIG  292 (320)
T ss_pred             CcH-hHHHHHHhhccCcEEEEEecCCCCCCccCHHHHHhcCcEEEEEehhhhcCCHHHHHHHHHHHHHHHHCCCCcCccc
Confidence            986 888999999999999999865433 223333344667776544321    12    2345678888889888766 


Q ss_pred             EEeecccHHHHHHHHHcCCccEEEEEec
Q 018382          323 EVIKMDYVNKAFERLEKNDVRYRFVVDV  350 (357)
Q Consensus       323 ~~~~~~~~~~a~~~~~~~~~~Gkvvi~~  350 (357)
                      +.|+++++++|++++.+++..||+++++
T Consensus       293 ~~~~~~~~~~a~~~~~~~~~~~~vv~~~  320 (320)
T cd05286         293 KRYPLADAAQAHRDLESRKTTGKLLLIP  320 (320)
T ss_pred             ceEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence            8999999999999999998889998753

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=100.00  E-value=9.7e-34  Score=261.02  Aligned_cols=289  Identities=24%  Similarity=0.236  Sum_probs=234.7

Q ss_pred             CCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCC---CCCCCCccCccccEEEEEeCCCCCCCCCCCEEEEcc
Q 018382           19 SGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLG---MSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVGV   95 (357)
Q Consensus        19 ~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~---~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~~   95 (357)
                      ++.+.+.+++.|++.++||+||+.++++|+.|.....+...   ....+.++|+|++|+|+++|++  +|++||+|+.  
T Consensus        17 ~~~~~~~~~~~p~~~~~~v~Vkv~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~--~~~~Gd~V~~--   92 (329)
T cd05288          17 PDDFELVEVPLPELKDGEVLVRTLYLSVDPYMRGWMSDAKSYSPPVQLGEPMRGGGVGEVVESRSP--DFKVGDLVSG--   92 (329)
T ss_pred             ccceeEEeccCCCCCCCeEEEEEEEEecCHHHhhhhccCcccCCCccCCCcccCceEEEEEecCCC--CCCCCCEEec--
Confidence            34678889999999999999999999999988765554321   1123457899999999999965  7999999963  


Q ss_pred             ccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeC-cceEECCCCCC--cccccc-ccchhhhhhhh
Q 018382           96 LVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQ-KFVVKIPDGMA--LEQAAP-LLCAGVTVFSP  171 (357)
Q Consensus        96 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~-~~~~~lP~~l~--~~~aa~-~~~~~~ta~~~  171 (357)
                                                          .++|++|+.++. +.++++|++++  +.++++ +++.+.+||++
T Consensus        93 ------------------------------------~~~~~~~~~v~~~~~~~~lP~~~~~~~~~~~~~l~~~~~ta~~~  136 (329)
T cd05288          93 ------------------------------------FLGWQEYAVVDGASGLRKLDPSLGLPLSAYLGVLGMTGLTAYFG  136 (329)
T ss_pred             ------------------------------------ccceEEEEEecchhhcEECCcccCCCHHHHHHhcccHHHHHHHH
Confidence                                                247999999999 99999999995  555555 89999999999


Q ss_pred             hhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHh---h-CCcc
Q 018382          172 LSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEA---A-DSLD  246 (357)
Q Consensus       172 l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~---~-~~~d  246 (357)
                      +.....+.++++|||+|+ |++|++++|+|+..|++|+++++++++.+.+++.+|++++++.++.+..+++   . +++|
T Consensus       137 l~~~~~~~~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~~~~~~~d  216 (329)
T cd05288         137 LTEIGKPKPGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEELGFDAAINYKTPDLAEALKEAAPDGID  216 (329)
T ss_pred             HHhccCCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhcCCceEEecCChhHHHHHHHhccCCce
Confidence            988777789999999985 9999999999999999999999988888877766899999888765443332   2 4799


Q ss_pred             EEEEcCCCCCChHHHHhccccCCeEEEEccCCCCcc------cchHHHhhccceEEEEeecCH-----HHHHHHHHHHHh
Q 018382          247 YIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQ------FLTPMVMLGRKAITGSFIGSM-----KETKEMLEFCRE  315 (357)
Q Consensus       247 ~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~------~~~~~~~~~~~~i~g~~~~~~-----~~~~~~~~~~~~  315 (357)
                      ++||++|+. .+..++++++++|+++.+|.......      ++....+.++.++.+......     +.+.++++++.+
T Consensus       217 ~vi~~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (329)
T cd05288         217 VYFDNVGGE-ILDAALTLLNKGGRIALCGAISQYNATEPPGPKNLGNIITKRLTMQGFIVSDYADRFPEALAELAKWLAE  295 (329)
T ss_pred             EEEEcchHH-HHHHHHHhcCCCceEEEEeeccCcccccccccccHHHHhhCcceEEeecchhhHHHHHHHHHHHHHHHHC
Confidence            999999986 88899999999999999986543211      224445677888888765443     456788899999


Q ss_pred             cCCCccE-EEeecccHHHHHHHHHcCCccEEEEE
Q 018382          316 KGVTSMI-EVIKMDYVNKAFERLEKNDVRYRFVV  348 (357)
Q Consensus       316 ~~l~~~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi  348 (357)
                      +.+++.. ..+++++++++++.+.+++..||+++
T Consensus       296 g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv  329 (329)
T cd05288         296 GKLKYREDVVEGLENAPEAFLGLFTGKNTGKLVV  329 (329)
T ss_pred             CCccccccccccHHHHHHHHHHHhcCCCccceeC
Confidence            9988744 77999999999999998888888874

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=2.3e-33  Score=258.74  Aligned_cols=294  Identities=24%  Similarity=0.322  Sum_probs=235.8

Q ss_pred             cCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCC-CCCCCccCccccEEEEEeCCCCCCCCCCCEEEEc
Q 018382           16 KDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGM-SNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVG   94 (357)
Q Consensus        16 ~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~-~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~   94 (357)
                      .+.+..+++.+.+.|.|.++||+|++.++++|++|+.++.|..+. ..+|.++|+|++|+|+.+|++++.|++||+|+..
T Consensus         9 ~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~   88 (331)
T cd08273           9 RGGPEVLKVVEADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPDQPPLPFTPGYDLVGRVDALGSGVTGFEVGDRVAAL   88 (331)
T ss_pred             CCCcccEEEeccCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceEEEEEEeCCCCccCCCCCEEEEe
Confidence            334456888899999999999999999999999999998886542 2467789999999999999999999999999753


Q ss_pred             cccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhhhhhhhhc
Q 018382           95 VLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSH  174 (357)
Q Consensus        95 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~  174 (357)
                      .                                   ..|++++|+.++.+.++++|+++++++++.+++.+.+||.++..
T Consensus        89 ~-----------------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~  133 (331)
T cd08273          89 T-----------------------------------RVGGNAEYINLDAKYLVPVPEGVDAAEAVCLVLNYVTAYQMLHR  133 (331)
T ss_pred             C-----------------------------------CCcceeeEEEechHHeEECCCCCCHHHHHhhhhHHHHHHHHHHH
Confidence            1                                   24889999999999999999999999999999999999999988


Q ss_pred             cCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHH-Hh-hCCccEEEEc
Q 018382          175 FGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQ-EA-ADSLDYIIDT  251 (357)
Q Consensus       175 ~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~-~~-~~~~d~v~d~  251 (357)
                      ...+.++++|+|+|+ |++|++++++++..|++|+++++ +++.+.+++ +|++. ++.+..+..+ .. .+++|++|++
T Consensus       134 ~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~v~~~~~-~~~~~~~~~-~g~~~-~~~~~~~~~~~~~~~~~~d~vl~~  210 (331)
T cd08273         134 AAKVLTGQRVLIHGASGGVGQALLELALLAGAEVYGTAS-ERNHAALRE-LGATP-IDYRTKDWLPAMLTPGGVDVVFDG  210 (331)
T ss_pred             hcCCCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEeC-HHHHHHHHH-cCCeE-EcCCCcchhhhhccCCCceEEEEC
Confidence            777799999999987 99999999999999999999987 777777766 99754 3443332222 12 2479999999


Q ss_pred             CCCCCChHHHHhccccCCeEEEEccCCCCcc--cch--------------HHHhhccceEEEEeec-------CHHHHHH
Q 018382          252 VPANHPLEPYLSLLKLDGKLILTGVINTPMQ--FLT--------------PMVMLGRKAITGSFIG-------SMKETKE  308 (357)
Q Consensus       252 ~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~--~~~--------------~~~~~~~~~i~g~~~~-------~~~~~~~  308 (357)
                      +++. ....++++++++|+++.+|.......  ...              ...+.+..+.......       ..+.+..
T Consensus       211 ~~~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~  289 (331)
T cd08273         211 VGGE-SYEESYAALAPGGTLVCYGGNSSLLQGRRSLAALGSLLARLAKLKLLPTGRRATFYYVWRDRAEDPKLFRQDLTE  289 (331)
T ss_pred             CchH-HHHHHHHHhcCCCEEEEEccCCCCCCccccccchhhhhhhhhhhcceeccceeEEEeechhcccCHHHHHHHHHH
Confidence            9998 58899999999999999987543221  110              0111222222222221       1256788


Q ss_pred             HHHHHHhcCCCccE-EEeecccHHHHHHHHHcCCccEEEEE
Q 018382          309 MLEFCREKGVTSMI-EVIKMDYVNKAFERLEKNDVRYRFVV  348 (357)
Q Consensus       309 ~~~~~~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi  348 (357)
                      +++++.++.+.+.+ ++|+++++++|++.+.+++..||+++
T Consensus       290 ~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvv~  330 (331)
T cd08273         290 LLDLLAKGKIRPKIAKRLPLSEVAEAHRLLESGKVVGKIVL  330 (331)
T ss_pred             HHHHHHCCCccCCcceEEcHHHHHHHHHHHHcCCCcceEEe
Confidence            89999999998766 89999999999999999888899886

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast

Probab=100.00  E-value=2.4e-33  Score=260.88  Aligned_cols=308  Identities=21%  Similarity=0.215  Sum_probs=232.3

Q ss_pred             eeehccCCCCCcceeeeecCCC---CCCcEEEEEeeeccccchHHHHhcCCCCCC-CCCccCccccEEEEEeCCCCC-CC
Q 018382           11 IGWAAKDPSGILSPYTYTLRNT---GAEDVYIKVLYCGICHTDIHQIKNDLGMSN-YPMVPGHEVVGEVKEVGSEVS-NF   85 (357)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~p~~---~~~evlV~v~~~~~~~~D~~~~~g~~~~~~-~p~~lG~e~~G~V~~vG~~v~-~~   85 (357)
                      ++|++....+++++++++.|.|   .++||+||+.++++|++|+..+.+...... .|.++|+|++|+|+++|++++ .|
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~I~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~   81 (352)
T cd08247           2 KALTFKNNTSPLTITTIKLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYTFHFKVKEKGLGRDYSGVIVKVGSNVASEW   81 (352)
T ss_pred             ceEEEecCCCcceeeccCCCCCCCCCCCeEEEEEEEEecChHhHHHhcccccccccCCCccCceeEEEEEEeCcccccCC
Confidence            3556555555666776666655   999999999999999999988764332222 367899999999999999998 89


Q ss_pred             CCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCc----ceEECCCCCCccccccc
Q 018382           86 KVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQK----FVVKIPDGMALEQAAPL  161 (357)
Q Consensus        86 ~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~----~~~~lP~~l~~~~aa~~  161 (357)
                      ++||+|+......                              ....|+|++|++++..    .++++|+++++++++.+
T Consensus        82 ~~Gd~V~~~~~~~------------------------------~~~~g~~~~~~~v~~~~~~~~~~~lP~~l~~~~aa~~  131 (352)
T cd08247          82 KVGDEVCGIYPHP------------------------------YGGQGTLSQYLLVDPKKDKKSITRKPENISLEEAAAW  131 (352)
T ss_pred             CCCCEEEEeecCC------------------------------CCCCceeeEEEEEccccccceeEECCCCCCHHHHHHh
Confidence            9999997542110                              1146899999999987    78999999999999999


Q ss_pred             cchhhhhhhhhhccC-CCCCCCeEEEEec-ChHHHHHHHHHHHc-CC-eEEEEeCCcHHHHHHHHhcCCcEEEcCCChh-
Q 018382          162 LCAGVTVFSPLSHFG-LKQSGLRGGILGL-GGVGHMGVLIAKAM-GH-HVTVISSSDKKRVEAMEHLGADQYLVSSDAT-  236 (357)
Q Consensus       162 ~~~~~ta~~~l~~~~-~~~~~~~VlI~G~-g~~G~~ai~la~~~-g~-~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~-  236 (357)
                      +..+.|||+++.... .+++|++|+|+|+ |.+|++++|+|+.. +. .|+.+.+ +++.+.+++ +|++++++.++.+ 
T Consensus       132 ~~~~~ta~~~l~~~~~~~~~g~~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~~~-~~~~~~~~~-~g~~~~i~~~~~~~  209 (352)
T cd08247         132 PLVLGTAYQILEDLGQKLGPDSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTCS-SRSAELNKK-LGADHFIDYDAHSG  209 (352)
T ss_pred             HHHHHHHHHHHHHhhhccCCCCeEEEECCCchHHHHHHHHHHhcCCcceEEEEeC-hhHHHHHHH-hCCCEEEecCCCcc
Confidence            999999999998887 6799999999987 89999999999987 55 5666654 555556655 9999988876543 


Q ss_pred             --H----HHHhh--CCccEEEEcCCCCCChHHHHhccc---cCCeEEEEccCCCC-cc-----------cchH----HHh
Q 018382          237 --R----MQEAA--DSLDYIIDTVPANHPLEPYLSLLK---LDGKLILTGVINTP-MQ-----------FLTP----MVM  289 (357)
Q Consensus       237 --~----~~~~~--~~~d~v~d~~g~~~~~~~~~~~l~---~~G~~v~~g~~~~~-~~-----------~~~~----~~~  289 (357)
                        .    ++...  +++|++|||+|+......++++++   ++|+++.++..... ..           ....    ...
T Consensus       210 ~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (352)
T cd08247         210 VKLLKPVLENVKGQGKFDLILDCVGGYDLFPHINSILKPKSKNGHYVTIVGDYKANYKKDTFNSWDNPSANARKLFGSLG  289 (352)
T ss_pred             cchHHHHHHhhcCCCCceEEEECCCCHHHHHHHHHHhCccCCCCEEEEEeCCCcccccchhhhhccccchhhhhhhhhhc
Confidence              2    22223  379999999998447788899999   99999987432210 00           0001    111


Q ss_pred             hccceEEEEee-cCHHHHHHHHHHHHhcCCCccE-EEeecccHHHHHHHHHcCCccEEEEEec
Q 018382          290 LGRKAITGSFI-GSMKETKEMLEFCREKGVTSMI-EVIKMDYVNKAFERLEKNDVRYRFVVDV  350 (357)
Q Consensus       290 ~~~~~i~g~~~-~~~~~~~~~~~~~~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~  350 (357)
                      .+...+..... ...+.++.+++++.++.+++.+ ++|+++++++|++.+++++..||+++++
T Consensus       290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  352 (352)
T cd08247         290 LWSYNYQFFLLDPNADWIEKCAELIADGKVKPPIDSVYPFEDYKEAFERLKSNRAKGKVVIKV  352 (352)
T ss_pred             CCCcceEEEEecCCHHHHHHHHHHHhCCCeEeeeccEecHHHHHHHHHHHHcCCCCCcEEEeC
Confidence            22223322221 1125678899999999998766 8999999999999999999899999864

This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi

>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=7.1e-33  Score=254.39  Aligned_cols=305  Identities=24%  Similarity=0.315  Sum_probs=244.3

Q ss_pred             eeeehccCC--CCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCC-CCCCCCccCccccEEEEEeCCCCCCCC
Q 018382           10 TIGWAAKDP--SGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLG-MSNYPMVPGHEVVGEVKEVGSEVSNFK   86 (357)
Q Consensus        10 ~~~~~~~~~--~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~-~~~~p~~lG~e~~G~V~~vG~~v~~~~   86 (357)
                      |++++....  ++.+.+++.+.|.+.+++|+|++.++++|++|+.+..+... ....|.++|+|++|+|+.+|+++..|+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~   80 (326)
T cd08272           1 MKALVLESFGGPEVFELREVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAAARPPLPAILGCDVAGVVEAVGEGVTRFR   80 (326)
T ss_pred             CeEEEEccCCCchheEEeecCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCCCCC
Confidence            356665433  33477778888889999999999999999999998877643 223477899999999999999999999


Q ss_pred             CCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhh
Q 018382           87 VGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGV  166 (357)
Q Consensus        87 ~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~  166 (357)
                      +||+|+....            +                .  ....|++++|+.++...++++|+++++.+++.++..+.
T Consensus        81 ~Gd~V~~~~~------------~----------------~--~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~  130 (326)
T cd08272          81 VGDEVYGCAG------------G----------------L--GGLQGSLAEYAVVDARLLALKPANLSMREAAALPLVGI  130 (326)
T ss_pred             CCCEEEEccC------------C----------------c--CCCCCceeEEEEecHHHcccCCCCCCHHHHHHhHHHHH
Confidence            9999975310            0                0  01478999999999999999999999999999999999


Q ss_pred             hhhhhhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCCh--hHHHHhhC
Q 018382          167 TVFSPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDA--TRMQEAAD  243 (357)
Q Consensus       167 ta~~~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~--~~~~~~~~  243 (357)
                      +||+++.....++++++++|+|+ |.+|++++++++..|++|++++++ ++.+.+.+ +|.+.+++....  +.+.....
T Consensus       131 ~a~~~l~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~-~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~  208 (326)
T cd08272         131 TAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAGARVYATASS-EKAAFARS-LGADPIIYYRETVVEYVAEHTG  208 (326)
T ss_pred             HHHHHHHHhcCCCCCCEEEEEcCCCcHHHHHHHHHHHcCCEEEEEech-HHHHHHHH-cCCCEEEecchhHHHHHHHhcC
Confidence            99999877777799999999985 999999999999999999999988 88888866 999888876654  12222322


Q ss_pred             --CccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCcccchHHHhhccceEEEEeecC-----------HHHHHHHH
Q 018382          244 --SLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGS-----------MKETKEML  310 (357)
Q Consensus       244 --~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~-----------~~~~~~~~  310 (357)
                        ++|.++|+.++. ....++++++++|+++.++... ..  .......++.++.+.....           .+.+..++
T Consensus       209 ~~~~d~v~~~~~~~-~~~~~~~~l~~~g~~v~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (326)
T cd08272         209 GRGFDVVFDTVGGE-TLDASFEAVALYGRVVSILGGA-TH--DLAPLSFRNATYSGVFTLLPLLTGEGRAHHGEILREAA  284 (326)
T ss_pred             CCCCcEEEECCChH-HHHHHHHHhccCCEEEEEecCC-cc--chhhHhhhcceEEEEEcccccccccchhhHHHHHHHHH
Confidence              699999999987 7888999999999999987653 21  2222235666766665332           24567788


Q ss_pred             HHHHhcCCCccE--EEeecccHHHHHHHHHcCCccEEEEEec
Q 018382          311 EFCREKGVTSMI--EVIKMDYVNKAFERLEKNDVRYRFVVDV  350 (357)
Q Consensus       311 ~~~~~~~l~~~i--~~~~~~~~~~a~~~~~~~~~~Gkvvi~~  350 (357)
                      +++.++.+.+.+  +.|++++++++++.+.+++..||+++++
T Consensus       285 ~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~  326 (326)
T cd08272         285 RLVERGQLRPLLDPRTFPLEEAAAAHARLESGSARGKIVIDV  326 (326)
T ss_pred             HHHHCCCcccccccceecHHHHHHHHHHHHcCCcccEEEEEC
Confidence            888899887753  8999999999999999888889999864

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=4.8e-33  Score=248.86  Aligned_cols=265  Identities=32%  Similarity=0.478  Sum_probs=223.3

Q ss_pred             cEEEEEeeeccccchHHHHhcCCC-CCCCCCccCccccEEEEEeCCCCCCCCCCCEEEEccccCCCCCCcccccCccccc
Q 018382           36 DVYIKVLYCGICHTDIHQIKNDLG-MSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYC  114 (357)
Q Consensus        36 evlV~v~~~~~~~~D~~~~~g~~~-~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~  114 (357)
                      ||+|++.++++|+.|++.+.|..+ ....|.++|+|++|+|+++|++++.|++||+|+..+.. .|+.|..|..    .|
T Consensus         1 ~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~-~~~~~~~~~~----~~   75 (271)
T cd05188           1 EVLVRVEAAGLCGTDLHIRRGGYPPPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNL-GCGTCELCRE----LC   75 (271)
T ss_pred             CeEEEEEEEEecchhHHHHcCCCCcCCCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCCC-CCCCCHHHHh----hC
Confidence            689999999999999999988765 34557889999999999999999999999999776554 6899999987    66


Q ss_pred             ccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhhhhhhhhccCCCCCCCeEEEEecChHHH
Q 018382          115 NKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGH  194 (357)
Q Consensus       115 ~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~  194 (357)
                      ....+.       +....|++++|+.++.+.++++|+++++++++.++..+.+||+++.....++++++|||+|+|++|+
T Consensus        76 ~~~~~~-------~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~G~  148 (271)
T cd05188          76 PGGGIL-------GEGLDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGGVGL  148 (271)
T ss_pred             CCCCEe-------ccccCCcceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCCCCCEEEEECCCHHHH
Confidence            655432       3346899999999999999999999999999999999999999999888888999999999866999


Q ss_pred             HHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHh----hCCccEEEEcCCCCCChHHHHhccccCCe
Q 018382          195 MGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEA----ADSLDYIIDTVPANHPLEPYLSLLKLDGK  270 (357)
Q Consensus       195 ~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~----~~~~d~v~d~~g~~~~~~~~~~~l~~~G~  270 (357)
                      +++++++..|.+|+++++++++.+.+++ +|++++++..+.+....+    .+++|++|++++.......++++++++|+
T Consensus       149 ~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~  227 (271)
T cd05188         149 LAAQLAKAAGARVIVTDRSDEKLELAKE-LGADHVIDYKEEDLEEELRLTGGGGADVVIDAVGGPETLAQALRLLRPGGR  227 (271)
T ss_pred             HHHHHHHHcCCeEEEEcCCHHHHHHHHH-hCCceeccCCcCCHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHhcccCCE
Confidence            9999999999999999999888888866 898888887765443332    24799999999983378889999999999


Q ss_pred             EEEEccCCCCccc-chHHHhhccceEEEEeecCHHHHHHHHHHH
Q 018382          271 LILTGVINTPMQF-LTPMVMLGRKAITGSFIGSMKETKEMLEFC  313 (357)
Q Consensus       271 ~v~~g~~~~~~~~-~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~  313 (357)
                      ++.++........ .....+.++.++.++..+...+++.+++++
T Consensus       228 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (271)
T cd05188         228 IVVVGGTSGGPPLDDLRRLLFKELTIIGSTGGTREDFEEALDLL  271 (271)
T ss_pred             EEEEccCCCCCCcccHHHHHhcceEEEEeecCCHHHHHHHHhhC
Confidence            9999876544332 244567899999999988888888877653

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=7.3e-33  Score=254.42  Aligned_cols=306  Identities=27%  Similarity=0.370  Sum_probs=240.9

Q ss_pred             eeeehccCCC--CCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCC
Q 018382           10 TIGWAAKDPS--GILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKV   87 (357)
Q Consensus        10 ~~~~~~~~~~--~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~   87 (357)
                      |+++.+.++.  ..+.+.+++.|++.++||+||+.++++|++|+..+.+..+...+|.++|||++|+|+.+|+++..+++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~~   80 (325)
T cd08271           1 MKAWVLPKPGAALQLTLEEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPAWSYPHVPGVDGAGVVVAVGAKVTGWKV   80 (325)
T ss_pred             CeeEEEccCCCcceeEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCcccccceEEEEEEeCCCCCcCCC
Confidence            4566665323  37889999999999999999999999999999988776543334678999999999999999999999


Q ss_pred             CCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhh
Q 018382           88 GDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVT  167 (357)
Q Consensus        88 Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~t  167 (357)
                      ||+|++...                                ....|++++|+.++...++++|+++++.+++.+++.+.+
T Consensus        81 Gd~V~~~~~--------------------------------~~~~~~~~s~~~~~~~~~~~ip~~~~~~~~a~~~~~~~~  128 (325)
T cd08271          81 GDRVAYHAS--------------------------------LARGGSFAEYTVVDARAVLPLPDSLSFEEAAALPCAGLT  128 (325)
T ss_pred             CCEEEeccC--------------------------------CCCCccceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHH
Confidence            999975421                                124689999999999999999999999999999999999


Q ss_pred             hhhhhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHH---HHhh-
Q 018382          168 VFSPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRM---QEAA-  242 (357)
Q Consensus       168 a~~~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~---~~~~-  242 (357)
                      |+.++.....+++|++|+|+|+ |++|++++++++..|++|+++. ++++.+.+.+ +|++.+++.......   .... 
T Consensus       129 a~~~~~~~~~~~~g~~vlI~g~~~~ig~~~~~~a~~~g~~v~~~~-~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~  206 (325)
T cd08271         129 AYQALFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGLRVITTC-SKRNFEYVKS-LGADHVIDYNDEDVCERIKEITG  206 (325)
T ss_pred             HHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEE-cHHHHHHHHH-cCCcEEecCCCccHHHHHHHHcC
Confidence            9999988777789999999997 8999999999999999999887 5667677755 999888877654333   2222 


Q ss_pred             -CCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCcccch--HHHhhccceEEEEeecC--------HHHHHHHHH
Q 018382          243 -DSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLT--PMVMLGRKAITGSFIGS--------MKETKEMLE  311 (357)
Q Consensus       243 -~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~--~~~~~~~~~i~g~~~~~--------~~~~~~~~~  311 (357)
                       .++|++++++++. .....+++++++|+++.++..........  .....+...+.......        .+.+.++++
T Consensus       207 ~~~~d~vi~~~~~~-~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (325)
T cd08271         207 GRGVDAVLDTVGGE-TAAALAPTLAFNGHLVCIQGRPDASPDPPFTRALSVHEVALGAAHDHGDPAAWQDLRYAGEELLE  285 (325)
T ss_pred             CCCCcEEEECCCcH-hHHHHHHhhccCCEEEEEcCCCCCcchhHHhhcceEEEEEecccccccchhhHHHHHHHHHHHHH
Confidence             2799999999987 66778999999999999865432211111  11122333333332211        133567888


Q ss_pred             HHHhcCCCccE-EEeecccHHHHHHHHHcCCccEEEEEec
Q 018382          312 FCREKGVTSMI-EVIKMDYVNKAFERLEKNDVRYRFVVDV  350 (357)
Q Consensus       312 ~~~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~  350 (357)
                      ++.++.+.+.. +.|+++++.++++.+.+++..||+++++
T Consensus       286 ~~~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~~kiv~~~  325 (325)
T cd08271         286 LLAAGKLEPLVIEVLPFEQLPEALRALKDRHTRGKIVVTI  325 (325)
T ss_pred             HHHCCCeeeccceEEcHHHHHHHHHHHHcCCccceEEEEC
Confidence            89899887654 8999999999999999988889999864

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=100.00  E-value=4.9e-32  Score=248.60  Aligned_cols=295  Identities=27%  Similarity=0.346  Sum_probs=243.4

Q ss_pred             CCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCC-CCCCCccCccccEEEEEeCCCCCCCCCCCEEEEcccc
Q 018382           19 SGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGM-SNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVGVLV   97 (357)
Q Consensus        19 ~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~-~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~   97 (357)
                      +..+.+.+.+.|.+.+++++|++.++++|++|+....+.++. ..+|.++|||++|+|+.+|+++.+|++||+|+..   
T Consensus        12 ~~~~~~~~~~~~~l~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~~Gd~V~~~---   88 (325)
T TIGR02824        12 PEVLVLVEVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKYPPPPGASDILGLEVAGEVVAVGEGVSRWKVGDRVCAL---   88 (325)
T ss_pred             cccceEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCCCccceeEEEEEEeCCCCCCCCCCCEEEEc---
Confidence            444666677777789999999999999999999988775542 2346789999999999999999999999999643   


Q ss_pred             CCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhhhhhhhhccCC
Q 018382           98 GCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGL  177 (357)
Q Consensus        98 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~  177 (357)
                                                      ..+|++++|+.++...++++|+++++.++++++..+.++|.++.....
T Consensus        89 --------------------------------~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~~~~~~~  136 (325)
T TIGR02824        89 --------------------------------VAGGGYAEYVAVPAGQVLPVPEGLSLVEAAALPETFFTVWSNLFQRGG  136 (325)
T ss_pred             --------------------------------cCCCcceeEEEecHHHcEeCCCCCCHHHHHhhhHHHHHHHHHHHHhcC
Confidence                                            135899999999999999999999999999999999999999877777


Q ss_pred             CCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHh---h--CCccEEEEc
Q 018382          178 KQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEA---A--DSLDYIIDT  251 (357)
Q Consensus       178 ~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~---~--~~~d~v~d~  251 (357)
                      ++++++|+|+|+ |++|.+++++++..|++|+++++++++.+.+.+ +|.+.+++....+....+   .  .++|+++++
T Consensus       137 ~~~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~  215 (325)
T TIGR02824       137 LKAGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAACEA-LGADIAINYREEDFVEVVKAETGGKGVDVILDI  215 (325)
T ss_pred             CCCCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cCCcEEEecCchhHHHHHHHHcCCCCeEEEEEC
Confidence            899999999986 999999999999999999999999888887755 998888776654433332   2  269999999


Q ss_pred             CCCCCChHHHHhccccCCeEEEEccCCC-CcccchHHHhhccceEEEEeecCH----------HHHHHHHHHHHhcCCCc
Q 018382          252 VPANHPLEPYLSLLKLDGKLILTGVINT-PMQFLTPMVMLGRKAITGSFIGSM----------KETKEMLEFCREKGVTS  320 (357)
Q Consensus       252 ~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~~----------~~~~~~~~~~~~~~l~~  320 (357)
                      +++. ....++++++++|+++.++.... ...++...++.++.++.+......          +.+.+++++++++.+.+
T Consensus       216 ~~~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  294 (325)
T TIGR02824       216 VGGS-YLNRNIKALALDGRIVQIGFQGGRKAELDLGPLLAKRLTITGSTLRARPVAEKAAIAAELREHVWPLLASGRVRP  294 (325)
T ss_pred             CchH-HHHHHHHhhccCcEEEEEecCCCCcCCCChHHHHhcCCEEEEEehhhcchhhhHHHHHHHHHHHHHHHHCCcccC
Confidence            9986 78889999999999999986432 123444555578888888775431          23456778888888877


Q ss_pred             cE-EEeecccHHHHHHHHHcCCccEEEEEec
Q 018382          321 MI-EVIKMDYVNKAFERLEKNDVRYRFVVDV  350 (357)
Q Consensus       321 ~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~  350 (357)
                      .. +.|++++++++++.+.+++..||+++++
T Consensus       295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  325 (325)
T TIGR02824       295 VIDKVFPLEDAAQAHALMESGDHIGKIVLTV  325 (325)
T ss_pred             ccccEEeHHHHHHHHHHHHhCCCcceEEEeC
Confidence            55 8999999999999999988889999864

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=6.5e-32  Score=248.09  Aligned_cols=299  Identities=23%  Similarity=0.304  Sum_probs=241.8

Q ss_pred             CCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCC-CCCCCCccCccccEEEEEeCCCCCCCCCCCEEEEcccc
Q 018382           19 SGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLG-MSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVGVLV   97 (357)
Q Consensus        19 ~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~-~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~   97 (357)
                      +..+++.+.+.|.+.+++++|++.++++|+.|+.+..+..+ ...+|.++|||++|+|+.+|+++.+|++||+|+..+..
T Consensus        12 ~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~~   91 (328)
T cd08268          12 PEVLRIEELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIEPPPLPARLGYEAAGVVEAVGAGVTGFAVGDRVSVIPAA   91 (328)
T ss_pred             cceeEEeecCCCCCCCCeEEEEEEEEecChHHhheeccccCCCCCCCCCCCcceEEEEEeeCCCCCcCCCCCEEEecccc
Confidence            34566778888889999999999999999999988776543 22446789999999999999999999999999754210


Q ss_pred             CCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhhhhhhhhccCC
Q 018382           98 GCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGL  177 (357)
Q Consensus        98 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~  177 (357)
                                                    .....|++++|+.++.+.++++|+++++++++.+++.+.++|.++.....
T Consensus        92 ------------------------------~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~  141 (328)
T cd08268          92 ------------------------------DLGQYGTYAEYALVPAAAVVKLPDGLSFVEAAALWMQYLTAYGALVELAG  141 (328)
T ss_pred             ------------------------------ccCCCccceEEEEechHhcEeCCCCCCHHHHHHhhhHHHHHHHHHHHhcC
Confidence                                          12356899999999999999999999999999999999999999887777


Q ss_pred             CCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHH---HhhC--CccEEEEc
Q 018382          178 KQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQ---EAAD--SLDYIIDT  251 (357)
Q Consensus       178 ~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~---~~~~--~~d~v~d~  251 (357)
                      +.++++++|+|+ |.+|++++++++..|++|+++++++++.+.+.+ +|.+.+++.+......   ....  ++|+++++
T Consensus       142 ~~~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~  220 (328)
T cd08268         142 LRPGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDALLA-LGAAHVIVTDEEDLVAEVLRITGGKGVDVVFDP  220 (328)
T ss_pred             CCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH-cCCCEEEecCCccHHHHHHHHhCCCCceEEEEC
Confidence            789999999987 999999999999999999999999888888866 8988888776543322   2222  69999999


Q ss_pred             CCCCCChHHHHhccccCCeEEEEccCCCC-cccchHHHhhccceEEEEeecC----HHH----HHHHHHHHHhcCCCccE
Q 018382          252 VPANHPLEPYLSLLKLDGKLILTGVINTP-MQFLTPMVMLGRKAITGSFIGS----MKE----TKEMLEFCREKGVTSMI  322 (357)
Q Consensus       252 ~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~~----~~~----~~~~~~~~~~~~l~~~i  322 (357)
                      .++. ....++++++++|+++.++..... ..++....+.++.++.+.....    ...    +..+.+++.++.+.+..
T Consensus       221 ~~~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  299 (328)
T cd08268         221 VGGP-QFAKLADALAPGGTLVVYGALSGEPTPFPLKAALKKSLTFRGYSLDEITLDPEARRRAIAFILDGLASGALKPVV  299 (328)
T ss_pred             CchH-hHHHHHHhhccCCEEEEEEeCCCCCCCCchHHHhhcCCEEEEEecccccCCHHHHHHHHHHHHHHHHCCCCcCCc
Confidence            9996 788899999999999999765432 2233333466777777765432    222    34455566777777655


Q ss_pred             -EEeecccHHHHHHHHHcCCccEEEEEe
Q 018382          323 -EVIKMDYVNKAFERLEKNDVRYRFVVD  349 (357)
Q Consensus       323 -~~~~~~~~~~a~~~~~~~~~~Gkvvi~  349 (357)
                       +.|++++++++++++++++..||++++
T Consensus       300 ~~~~~~~~~~~~~~~~~~~~~~~~vv~~  327 (328)
T cd08268         300 DRVFPFDDIVEAHRYLESGQQIGKIVVT  327 (328)
T ss_pred             ccEEcHHHHHHHHHHHHcCCCCceEEEe
Confidence             899999999999999998888999876

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

Probab=100.00  E-value=3.5e-32  Score=247.81  Aligned_cols=289  Identities=28%  Similarity=0.364  Sum_probs=236.1

Q ss_pred             CcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCC---CCCCCCccCccccEEEEEeCCCCCCCCCCCEEEEcccc
Q 018382           21 ILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLG---MSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVGVLV   97 (357)
Q Consensus        21 ~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~---~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~   97 (357)
                      .+.+++.+.|+++++||+||+.++++|+.|+..+.|...   ....|..+|||++|+|+.+|++++++++||+|+.....
T Consensus        14 ~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~~G~~V~~~~~~   93 (309)
T cd05289          14 VLELADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAGVVVAVGPGVTGFKVGDEVFGMTPF   93 (309)
T ss_pred             ceeecccCCCCCCCCeEEEEEEEeeCCHHHHHHhcCCccccCCCCCCCccccceeEEEEeeCCCCCCCCCCCEEEEccCC
Confidence            355677788889999999999999999999998877542   33457889999999999999999999999999754210


Q ss_pred             CCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhhhhhhhhccCC
Q 018382           98 GCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGL  177 (357)
Q Consensus        98 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~  177 (357)
                                                      ...|++++|+.++...++++|+++++..++.+++.+.+++.++.....
T Consensus        94 --------------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~  141 (309)
T cd05289          94 --------------------------------TRGGAYAEYVVVPADELALKPANLSFEEAAALPLAGLTAWQALFELGG  141 (309)
T ss_pred             --------------------------------CCCCcceeEEEecHHHhccCCCCCCHHHHHhhhHHHHHHHHHHHhhcC
Confidence                                            136899999999999999999999999999999999999999988887


Q ss_pred             CCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHh-hCCccEEEEcCCCC
Q 018382          178 KQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEA-ADSLDYIIDTVPAN  255 (357)
Q Consensus       178 ~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~-~~~~d~v~d~~g~~  255 (357)
                      +.++++|+|+|+ |.+|++++++++..|++|+++++++ +.+.+.+ +|.+++++....+..+.. ..++|++|+++++.
T Consensus       142 ~~~~~~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~~~-~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~d~v~~~~~~~  219 (309)
T cd05289         142 LKAGQTVLIHGAAGGVGSFAVQLAKARGARVIATASAA-NADFLRS-LGADEVIDYTKGDFERAAAPGGVDAVLDTVGGE  219 (309)
T ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecch-hHHHHHH-cCCCEEEeCCCCchhhccCCCCceEEEECCchH
Confidence            799999999997 9999999999999999999998877 7777755 998888876654433211 23799999999988


Q ss_pred             CChHHHHhccccCCeEEEEccCCCCcccchHHHhhccceEEEEeecC-HHHHHHHHHHHHhcCCCccE-EEeecccHHHH
Q 018382          256 HPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGS-MKETKEMLEFCREKGVTSMI-EVIKMDYVNKA  333 (357)
Q Consensus       256 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~-~~~~~~~~~~~~~~~l~~~i-~~~~~~~~~~a  333 (357)
                       ....++++++++|+++.++.......    ....++.++....... .+.+..++++++++.+.+.+ +.|+++++++|
T Consensus       220 -~~~~~~~~l~~~g~~v~~g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a  294 (309)
T cd05289         220 -TLARSLALVKPGGRLVSIAGPPPAEQ----AAKRRGVRAGFVFVEPDGEQLAELAELVEAGKLRPVVDRVFPLEDAAEA  294 (309)
T ss_pred             -HHHHHHHHHhcCcEEEEEcCCCcchh----hhhhccceEEEEEecccHHHHHHHHHHHHCCCEEEeeccEEcHHHHHHH
Confidence             88899999999999999986543211    2223444444443321 56788899999999887766 89999999999


Q ss_pred             HHHHHcCCccEEEEE
Q 018382          334 FERLEKNDVRYRFVV  348 (357)
Q Consensus       334 ~~~~~~~~~~Gkvvi  348 (357)
                      ++.+.+++..+|+++
T Consensus       295 ~~~~~~~~~~~kvv~  309 (309)
T cd05289         295 HERLESGHARGKVVL  309 (309)
T ss_pred             HHHHHhCCCCCcEeC
Confidence            999998888888764

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et

>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=6.4e-32  Score=247.49  Aligned_cols=298  Identities=27%  Similarity=0.346  Sum_probs=232.1

Q ss_pred             cCCCCCc--ceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCC---CCCCCCccCccccEEEEEeCCCCCCCCCCCE
Q 018382           16 KDPSGIL--SPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLG---MSNYPMVPGHEVVGEVKEVGSEVSNFKVGDK   90 (357)
Q Consensus        16 ~~~~~~~--~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~---~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~   90 (357)
                      .+++..+  .+.+.+.|++.++||+|++.++++|++|++.+.|..+   ....+..+|+|++|+|+++|+++++|.+||+
T Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~   85 (319)
T cd08267           6 YGSPEVLLLLEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSGVTRFKVGDE   85 (319)
T ss_pred             CCChhhhhhccccCCCCCCCCCEEEEEEEEeeCCHHHHHHHcCCCcccccCCCCCcccceeeEEEEEeCCCCCCCCCCCE
Confidence            3344444  6778899999999999999999999999999877652   1234668999999999999999999999999


Q ss_pred             EEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhhhhh
Q 018382           91 VGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFS  170 (357)
Q Consensus        91 V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~  170 (357)
                      |+....                                ....|++++|+.++.+.++++|+++++++++.+++.+.+||+
T Consensus        86 V~~~~~--------------------------------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~  133 (319)
T cd08267          86 VFGRLP--------------------------------PKGGGALAEYVVAPESGLAKKPEGVSFEEAAALPVAGLTALQ  133 (319)
T ss_pred             EEEecc--------------------------------CCCCceeeEEEEechhheEECCCCCCHHHHHhhhhHHHHHHH
Confidence            965421                                013689999999999999999999999999999999999999


Q ss_pred             hhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhh--CCccE
Q 018382          171 PLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAA--DSLDY  247 (357)
Q Consensus       171 ~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~--~~~d~  247 (357)
                      ++.....++++++|+|+|+ |++|++++++++..|++|++++++ ++.+.+.+ +|.+++++.+..+......  +++|+
T Consensus       134 ~~~~~~~~~~g~~vli~g~~g~~g~~~~~la~~~g~~v~~~~~~-~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~d~  211 (319)
T cd08267         134 ALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGAHVTGVCST-RNAELVRS-LGADEVIDYTTEDFVALTAGGEKYDV  211 (319)
T ss_pred             HHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCH-HHHHHHHH-cCCCEeecCCCCCcchhccCCCCCcE
Confidence            9988887799999999997 999999999999999999998875 67677755 9998888766543322222  37999


Q ss_pred             EEEcCCCC-CChHHHHhccccCCeEEEEccCCCCcccc-----hHHHh-hccceEEEEeecCHHHHHHHHHHHHhcCCCc
Q 018382          248 IIDTVPAN-HPLEPYLSLLKLDGKLILTGVINTPMQFL-----TPMVM-LGRKAITGSFIGSMKETKEMLEFCREKGVTS  320 (357)
Q Consensus       248 v~d~~g~~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~-----~~~~~-~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~  320 (357)
                      +++|+++. ......+..++++|+++.+|.........     ..... .+..... ......+.+.++++++.++.+.+
T Consensus       212 vi~~~~~~~~~~~~~~~~l~~~g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~  290 (319)
T cd08267         212 IFDAVGNSPFSLYRASLALKPGGRYVSVGGGPSGLLLVLLLLPLTLGGGGRRLKFF-LAKPNAEDLEQLAELVEEGKLKP  290 (319)
T ss_pred             EEECCCchHHHHHHhhhccCCCCEEEEeccccccccccccccchhhccccceEEEE-EecCCHHHHHHHHHHHHCCCeee
Confidence            99999853 12233444599999999998754322211     11111 1222221 12223677899999999999887


Q ss_pred             cE-EEeecccHHHHHHHHHcCCccEEEEE
Q 018382          321 MI-EVIKMDYVNKAFERLEKNDVRYRFVV  348 (357)
Q Consensus       321 ~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi  348 (357)
                      .+ +.|+++++++|++.+.+++..||+++
T Consensus       291 ~~~~~~~~~~i~~a~~~~~~~~~~~~vvv  319 (319)
T cd08267         291 VIDSVYPLEDAPEAYRRLKSGRARGKVVI  319 (319)
T ss_pred             eeeeEEcHHHHHHHHHHHhcCCCCCcEeC
Confidence            66 89999999999999998888888874

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08251 polyketide_synthase polyketide synthase

Probab=100.00  E-value=9.6e-32  Score=244.33  Aligned_cols=283  Identities=22%  Similarity=0.317  Sum_probs=228.9

Q ss_pred             cCCCCCCcEEEEEeeeccccchHHHHhcCCC-CCCCCCccCccccEEEEEeCCCCCCCCCCCEEEEccccCCCCCCcccc
Q 018382           29 LRNTGAEDVYIKVLYCGICHTDIHQIKNDLG-MSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCE  107 (357)
Q Consensus        29 ~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~-~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~g~~~~~~  107 (357)
                      +|++.+++++||+.++++|+.|+..+.+.++ ...+|.++|+|++|+|+++|+++++|++||+|+...            
T Consensus         2 ~p~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~------------   69 (303)
T cd08251           2 VAPPGPGEVRIQVRAFSLNFGDLLCVRGLYPTMPPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGT------------   69 (303)
T ss_pred             CCCCCCCEEEEEEEEeecChHHHHHHCCCCCCCCCCCCCcCceeeEEEEEECCCCCCCCCCCEEEEec------------
Confidence            5788999999999999999999999888654 235677899999999999999999999999997541            


Q ss_pred             cCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhhhhhhhhccCCCCCCCeEEEE
Q 018382          108 ADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGIL  187 (357)
Q Consensus       108 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~  187 (357)
                                           ....|+|++|+.++.+.++++|+++++++++.++..+.+||.++. ...++++++|+|+
T Consensus        70 ---------------------~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~-~~~~~~g~~vli~  127 (303)
T cd08251          70 ---------------------GESMGGHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAFA-RAGLAKGEHILIQ  127 (303)
T ss_pred             ---------------------CCCCcceeeEEEccHHHeEECCCCCCHHHHHHhHHHHHHHHHHHH-hcCCCCCCEEEEe
Confidence                                 124689999999999999999999999999999999999999985 5566999999999


Q ss_pred             ec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHH---hh--CCccEEEEcCCCCCChHHH
Q 018382          188 GL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQE---AA--DSLDYIIDTVPANHPLEPY  261 (357)
Q Consensus       188 G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~---~~--~~~d~v~d~~g~~~~~~~~  261 (357)
                      |+ |.+|++++|+++..|++|+++++++++.+.+++ +|++.+++....+..+.   ..  .++|+++|++++. .....
T Consensus       128 ~~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~~~~~~~-~~~~~  205 (303)
T cd08251         128 TATGGTGLMAVQLARLKGAEIYATASSDDKLEYLKQ-LGVPHVINYVEEDFEEEIMRLTGGRGVDVVINTLSGE-AIQKG  205 (303)
T ss_pred             cCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH-cCCCEEEeCCCccHHHHHHHHcCCCCceEEEECCcHH-HHHHH
Confidence            65 999999999999999999999999888888866 99999888765443333   32  3799999999876 78889


Q ss_pred             HhccccCCeEEEEccCCCC--cccchHHHhhccceEEEEee-----cCH----HHHHHHHHHHHhcCCCccE-EEeeccc
Q 018382          262 LSLLKLDGKLILTGVINTP--MQFLTPMVMLGRKAITGSFI-----GSM----KETKEMLEFCREKGVTSMI-EVIKMDY  329 (357)
Q Consensus       262 ~~~l~~~G~~v~~g~~~~~--~~~~~~~~~~~~~~i~g~~~-----~~~----~~~~~~~~~~~~~~l~~~i-~~~~~~~  329 (357)
                      +++++++|+++.++.....  ..+.... +.++..+.....     ...    +.+.++++++.++.+++.. +.|++++
T Consensus       206 ~~~l~~~g~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~  284 (303)
T cd08251         206 LNCLAPGGRYVEIAMTALKSAPSVDLSV-LSNNQSFHSVDLRKLLLLDPEFIADYQAEMVSLVEEGELRPTVSRIFPFDD  284 (303)
T ss_pred             HHHhccCcEEEEEeccCCCccCccChhH-hhcCceEEEEehHHhhhhCHHHHHHHHHHHHHHHHCCCccCCCceEEcHHH
Confidence            9999999999998764321  1222222 222222222211     111    3467788889999888765 8999999


Q ss_pred             HHHHHHHHHcCCccEEEEE
Q 018382          330 VNKAFERLEKNDVRYRFVV  348 (357)
Q Consensus       330 ~~~a~~~~~~~~~~Gkvvi  348 (357)
                      ++++++.+.+++..||+++
T Consensus       285 ~~~~~~~~~~~~~~~~iv~  303 (303)
T cd08251         285 IGEAYRYLSDRENIGKVVV  303 (303)
T ss_pred             HHHHHHHHHhCCCcceEeC
Confidence            9999999999988898874

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=100.00  E-value=4e-31  Score=242.20  Aligned_cols=294  Identities=29%  Similarity=0.426  Sum_probs=240.8

Q ss_pred             CCCCcceeeeecCCCC-CCcEEEEEeeeccccchHHHHhcCCC-CCCCCCccCccccEEEEEeCCCCCCCCCCCEEEEcc
Q 018382           18 PSGILSPYTYTLRNTG-AEDVYIKVLYCGICHTDIHQIKNDLG-MSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVGV   95 (357)
Q Consensus        18 ~~~~~~~~~~~~p~~~-~~evlV~v~~~~~~~~D~~~~~g~~~-~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~~   95 (357)
                      .+..+++.+.+ |.+. +++++|++.++++|++|+..+.|... ....|.++|+|++|+|+.+|+++.++++||+|+...
T Consensus        11 ~~~~~~~~~~~-~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V~~~~   89 (323)
T cd08241          11 GPEDLVLEEVP-PEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQVKPPLPFVPGSEVAGVVEAVGEGVTGFKVGDRVVALT   89 (323)
T ss_pred             CcceeEEecCC-CCCCCCCeEEEEEEEEecCHHHHHHHcCCCCCCCCCCCcccceeEEEEEEeCCCCCCCCCCCEEEEec
Confidence            34456666676 6666 59999999999999999998877653 223466799999999999999999999999997531


Q ss_pred             ccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhhhhhhhhcc
Q 018382           96 LVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHF  175 (357)
Q Consensus        96 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~  175 (357)
                                                         ..|++++|+.++.+.++++|++++..+++.+...+.+||.++...
T Consensus        90 -----------------------------------~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~  134 (323)
T cd08241          90 -----------------------------------GQGGFAEEVVVPAAAVFPLPDGLSFEEAAALPVTYGTAYHALVRR  134 (323)
T ss_pred             -----------------------------------CCceeEEEEEcCHHHceeCCCCCCHHHHhhhhhHHHHHHHHHHHh
Confidence                                               268899999999999999999999999999999999999998776


Q ss_pred             CCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHH---Hhh--CCccEEE
Q 018382          176 GLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQ---EAA--DSLDYII  249 (357)
Q Consensus       176 ~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~---~~~--~~~d~v~  249 (357)
                      ..++++++|+|+|+ |++|++++++++..|++|+++++++++.+.+.+ +|++.+++....+..+   ...  .++|.++
T Consensus       135 ~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~  213 (323)
T cd08241         135 ARLQPGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLALARA-LGADHVIDYRDPDLRERVKALTGGRGVDVVY  213 (323)
T ss_pred             cCCCCCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHHHHH-cCCceeeecCCccHHHHHHHHcCCCCcEEEE
Confidence            77789999999997 999999999999999999999999888888877 8988888766543333   232  2699999


Q ss_pred             EcCCCCCChHHHHhccccCCeEEEEccCCCCcc-cchHHHhhccceEEEEeecCH---------HHHHHHHHHHHhcCCC
Q 018382          250 DTVPANHPLEPYLSLLKLDGKLILTGVINTPMQ-FLTPMVMLGRKAITGSFIGSM---------KETKEMLEFCREKGVT  319 (357)
Q Consensus       250 d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~-~~~~~~~~~~~~i~g~~~~~~---------~~~~~~~~~~~~~~l~  319 (357)
                      +++|.. ....++++++++|+++.++....... +.....+.++.++.+......         +.+..+++++.++.+.
T Consensus       214 ~~~g~~-~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  292 (323)
T cd08241         214 DPVGGD-VFEASLRSLAWGGRLLVIGFASGEIPQIPANLLLLKNISVVGVYWGAYARREPELLRANLAELFDLLAEGKIR  292 (323)
T ss_pred             ECccHH-HHHHHHHhhccCCEEEEEccCCCCcCcCCHHHHhhcCcEEEEEecccccchhHHHHHHHHHHHHHHHHCCCcc
Confidence            999986 78889999999999999886543322 333344567888887765321         4567788899999887


Q ss_pred             ccE-EEeecccHHHHHHHHHcCCccEEEEEe
Q 018382          320 SMI-EVIKMDYVNKAFERLEKNDVRYRFVVD  349 (357)
Q Consensus       320 ~~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~  349 (357)
                      +.. +.|+++++.++++++.+++..||++++
T Consensus       293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vvv~  323 (323)
T cd08241         293 PHVSAVFPLEQAAEALRALADRKATGKVVLT  323 (323)
T ss_pred             cccceEEcHHHHHHHHHHHHhCCCCCcEEeC
Confidence            766 899999999999999988888898863

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=1.6e-30  Score=240.14  Aligned_cols=293  Identities=24%  Similarity=0.348  Sum_probs=234.8

Q ss_pred             CCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCC-CCCCCCccCccccEEEEEeCCCCCCCCCCCEEEEccccC
Q 018382           20 GILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLG-MSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVGVLVG   98 (357)
Q Consensus        20 ~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~-~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~   98 (357)
                      ..+.+.+.+.|+|.++||+||+.++++|++|+.+..|..+ ....|.++|+|++|+|+.+|+++.+|++||+|+..    
T Consensus        12 ~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V~~~----   87 (337)
T cd08275          12 DKLKVEKEALPEPSSGEVRVRVEACGLNFADLMARQGLYDSAPKPPFVPGFECAGTVEAVGEGVKDFKVGDRVMGL----   87 (337)
T ss_pred             cceEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCCCCCCCCCCcceeEEEEEEECCCCcCCCCCCEEEEe----
Confidence            4577777788889999999999999999999998887654 23457789999999999999999999999999753    


Q ss_pred             CCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhhhhhhhhccCCC
Q 018382           99 CCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLK  178 (357)
Q Consensus        99 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~  178 (357)
                                                     ...|+|++|+.++.+.++++|+++++++++.+++.+.++|.++.....+
T Consensus        88 -------------------------------~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~  136 (337)
T cd08275          88 -------------------------------TRFGGYAEVVNVPADQVFPLPDGMSFEEAAAFPVNYLTAYYALFELGNL  136 (337)
T ss_pred             -------------------------------cCCCeeeeEEEecHHHeEECCCCCCHHHHhhhhHHHHHHHHHHHHhhCC
Confidence                                           1358999999999999999999999999999999999999998877777


Q ss_pred             CCCCeEEEEec-ChHHHHHHHHHHHc-CCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHH---Hh-hCCccEEEEcC
Q 018382          179 QSGLRGGILGL-GGVGHMGVLIAKAM-GHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQ---EA-ADSLDYIIDTV  252 (357)
Q Consensus       179 ~~~~~VlI~G~-g~~G~~ai~la~~~-g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~---~~-~~~~d~v~d~~  252 (357)
                      +++++|+|+|+ |.+|++++++|+.. +..++.. ..+++.+.+.+ +|++.+++.+..+...   .. .+++|+++|+.
T Consensus       137 ~~~~~vli~g~~g~~g~~~~~~a~~~~~~~~~~~-~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~  214 (337)
T cd08275         137 RPGQSVLVHSAAGGVGLAAGQLCKTVPNVTVVGT-ASASKHEALKE-NGVTHVIDYRTQDYVEEVKKISPEGVDIVLDAL  214 (337)
T ss_pred             CCCCEEEEEcCcchHHHHHHHHHHHccCcEEEEe-CCHHHHHHHHH-cCCcEEeeCCCCcHHHHHHHHhCCCceEEEECC
Confidence            99999999997 99999999999998 3333222 23446667755 9998888776543322   22 24799999999


Q ss_pred             CCCCChHHHHhccccCCeEEEEccCCCC--cc---------------cchHHHhhccceEEEEeecCH--------HHHH
Q 018382          253 PANHPLEPYLSLLKLDGKLILTGVINTP--MQ---------------FLTPMVMLGRKAITGSFIGSM--------KETK  307 (357)
Q Consensus       253 g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~~---------------~~~~~~~~~~~~i~g~~~~~~--------~~~~  307 (357)
                      |+. ....++++++++|+++.+|.....  ..               ......+.++.++.++.....        ..+.
T Consensus       215 g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (337)
T cd08275         215 GGE-DTRKSYDLLKPMGRLVVYGAANLVTGEKRSWFKLAKKWWNRPKVDPMKLISENKSVLGFNLGWLFEERELLTEVMD  293 (337)
T ss_pred             cHH-HHHHHHHhhccCcEEEEEeecCCcCcccccccccccccccccccCHHHHhhcCceEEEeechhhhhChHHHHHHHH
Confidence            987 788899999999999999865321  11               111344677778777754211        2356


Q ss_pred             HHHHHHHhcCCCccE-EEeecccHHHHHHHHHcCCccEEEEEec
Q 018382          308 EMLEFCREKGVTSMI-EVIKMDYVNKAFERLEKNDVRYRFVVDV  350 (357)
Q Consensus       308 ~~~~~~~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~  350 (357)
                      ++++++.++.+.+.. +.|++++++++++.+.+++..||+++++
T Consensus       294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~  337 (337)
T cd08275         294 KLLKLYEEGKIKPKIDSVFPFEEVGEAMRRLQSRKNIGKVVLTP  337 (337)
T ss_pred             HHHHHHHCCCCCCceeeEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence            788888999888766 8999999999999999988889999864

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05195 enoyl_red enoyl reductase of polyketide synthase

Probab=99.98  E-value=1.6e-30  Score=234.46  Aligned_cols=273  Identities=25%  Similarity=0.314  Sum_probs=224.9

Q ss_pred             CcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCCCCEEEEccccCCCCCCcccccCccccc
Q 018382           35 EDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYC  114 (357)
Q Consensus        35 ~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~  114 (357)
                      +||+||+.++++|++|++...|..+  .+|.++|+|++|+|+++|++++.|++||+|+..                    
T Consensus         1 ~~v~i~v~~~~~~~~d~~~~~g~~~--~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~--------------------   58 (293)
T cd05195           1 DEVEVEVKAAGLNFRDVLVALGLLP--GDETPLGLECSGIVTRVGSGVTGLKVGDRVMGL--------------------   58 (293)
T ss_pred             CceEEEEEEEecCHHHHHHHhCCCC--CCCCccceeeeEEEEeecCCccCCCCCCEEEEE--------------------
Confidence            5899999999999999999987653  457789999999999999999999999999753                    


Q ss_pred             ccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhhhhhhhhccCCCCCCCeEEEEec-ChHH
Q 018382          115 NKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGL-GGVG  193 (357)
Q Consensus       115 ~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~~G  193 (357)
                                      ..|+|++|+.++.+.++++|+++++.+++.+++.+.++|.++.....+++|++|+|+|+ |++|
T Consensus        59 ----------------~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~g~~g  122 (293)
T cd05195          59 ----------------APGAFATHVRVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARLQKGESVLIHAAAGGVG  122 (293)
T ss_pred             ----------------ecCcccceEEechhheEeCCCCCCHHHHhhchHHHHHHHHHHHHHhccCCCCEEEEecCCCHHH
Confidence                            36899999999999999999999999999999999999999877777799999999975 9999


Q ss_pred             HHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcC--CcEEEcCCChhHHHH---hh--CCccEEEEcCCCCCChHHHHhccc
Q 018382          194 HMGVLIAKAMGHHVTVISSSDKKRVEAMEHLG--ADQYLVSSDATRMQE---AA--DSLDYIIDTVPANHPLEPYLSLLK  266 (357)
Q Consensus       194 ~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g--~~~vv~~~~~~~~~~---~~--~~~d~v~d~~g~~~~~~~~~~~l~  266 (357)
                      ++++|+++..|++|+++++++++.+.+++ .|  ++++++....+..++   ..  .++|++++++++. .+..++++++
T Consensus       123 ~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~  200 (293)
T cd05195         123 QAAIQLAQHLGAEVFATVGSEEKREFLRE-LGGPVDHIFSSRDLSFADGILRATGGRGVDVVLNSLSGE-LLRASWRCLA  200 (293)
T ss_pred             HHHHHHHHHcCCEEEEEeCCHHHHHHHHH-hCCCcceEeecCchhHHHHHHHHhCCCCceEEEeCCCch-HHHHHHHhcc
Confidence            99999999999999999999888888877 66  678887766444333   22  2799999999988 8999999999


Q ss_pred             cCCeEEEEccCCCC--cccchHHHhhccceEEEEeecC---------HHHHHHHHHHHHhcCCCccE-EEeecccHHHHH
Q 018382          267 LDGKLILTGVINTP--MQFLTPMVMLGRKAITGSFIGS---------MKETKEMLEFCREKGVTSMI-EVIKMDYVNKAF  334 (357)
Q Consensus       267 ~~G~~v~~g~~~~~--~~~~~~~~~~~~~~i~g~~~~~---------~~~~~~~~~~~~~~~l~~~i-~~~~~~~~~~a~  334 (357)
                      ++|+++.++.....  ..+.... +.++..+.......         .+.+..+++++.++.+.+.+ +.++++++.+++
T Consensus       201 ~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~  279 (293)
T cd05195         201 PFGRFVEIGKRDILSNSKLGMRP-FLRNVSFSSVDLDQLARERPELLRELLREVLELLEAGVLKPLPPTVVPSASEIDAF  279 (293)
T ss_pred             cCceEEEeeccccccCCccchhh-hccCCeEEEEeHHHHhhhChHHHHHHHHHHHHHHHCCCcccCCCeeechhhHHHHH
Confidence            99999998865432  1222222 23444544433211         13567888899999988766 789999999999


Q ss_pred             HHHHcCCccEEEEE
Q 018382          335 ERLEKNDVRYRFVV  348 (357)
Q Consensus       335 ~~~~~~~~~Gkvvi  348 (357)
                      +.+.+++..||+++
T Consensus       280 ~~~~~~~~~~~ivv  293 (293)
T cd05195         280 RLMQSGKHIGKVVL  293 (293)
T ss_pred             HHHhcCCCCceecC
Confidence            99999888888764

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase

>smart00829 PKS_ER Enoylreductase

Probab=99.97  E-value=8.5e-30  Score=229.48  Aligned_cols=268  Identities=25%  Similarity=0.316  Sum_probs=218.4

Q ss_pred             EEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCCCCEEEEccccCCCCCCcccccCccccccccc
Q 018382           39 IKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKI  118 (357)
Q Consensus        39 V~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~  118 (357)
                      ||+.++++|++|++...|.++   .|.++|+|++|+|+++|++++.|++||+|+..                        
T Consensus         2 i~v~~~~i~~~d~~~~~g~~~---~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~------------------------   54 (288)
T smart00829        2 VEVRAAGLNFRDVLIALGLLP---GEAVLGGECAGVVTRVGPGVTGLAVGDRVMGL------------------------   54 (288)
T ss_pred             eeEEEEecCHHHHHHhcCCCC---CCCCCCceeEEEEEeeCCCCcCCCCCCEEEEE------------------------
Confidence            789999999999999887653   35689999999999999999999999999643                        


Q ss_pred             ccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhhhhhhhhccCCCCCCCeEEEEec-ChHHHHHH
Q 018382          119 WSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGL-GGVGHMGV  197 (357)
Q Consensus       119 ~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~~G~~ai  197 (357)
                                  ..|+|++|+.++.+.++++|+++++++++.+++.+.++|.++.....+.++++|+|+|+ |.+|++++
T Consensus        55 ------------~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~~~~g~~~~  122 (288)
T smart00829       55 ------------APGSFATYVRTDARLVVPIPDGLSFEEAATVPVVFLTAYYALVDLARLRPGESVLIHAAAGGVGQAAI  122 (288)
T ss_pred             ------------cCCceeeEEEccHHHeEECCCCCCHHHHHhchHHHHHHHHHHHHHhCCCCCCEEEEecCCcHHHHHHH
Confidence                        35899999999999999999999999999999999999999867677789999999985 99999999


Q ss_pred             HHHHHcCCeEEEEeCCcHHHHHHHHhcCC--cEEEcCCChhHHHHh---h--CCccEEEEcCCCCCChHHHHhccccCCe
Q 018382          198 LIAKAMGHHVTVISSSDKKRVEAMEHLGA--DQYLVSSDATRMQEA---A--DSLDYIIDTVPANHPLEPYLSLLKLDGK  270 (357)
Q Consensus       198 ~la~~~g~~V~~~~~~~~~~~~~~~~~g~--~~vv~~~~~~~~~~~---~--~~~d~v~d~~g~~~~~~~~~~~l~~~G~  270 (357)
                      ++++..|++|+++++++++.+.+++ +|+  +++++.++.+..+.+   .  .++|+++|++++. ....++++++++|+
T Consensus       123 ~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~~~g~  200 (288)
T smart00829      123 QLAQHLGAEVFATAGSPEKRDFLRE-LGIPDDHIFSSRDLSFADEILRATGGRGVDVVLNSLAGE-FLDASLRCLAPGGR  200 (288)
T ss_pred             HHHHHcCCEEEEEeCCHHHHHHHHH-cCCChhheeeCCCccHHHHHHHHhCCCCcEEEEeCCCHH-HHHHHHHhccCCcE
Confidence            9999999999999999999888866 997  778877665443332   2  2699999999975 78889999999999


Q ss_pred             EEEEccCCC--CcccchHHHhhccceEEEEeec--------CHHHHHHHHHHHHhcCCCccE-EEeecccHHHHHHHHHc
Q 018382          271 LILTGVINT--PMQFLTPMVMLGRKAITGSFIG--------SMKETKEMLEFCREKGVTSMI-EVIKMDYVNKAFERLEK  339 (357)
Q Consensus       271 ~v~~g~~~~--~~~~~~~~~~~~~~~i~g~~~~--------~~~~~~~~~~~~~~~~l~~~i-~~~~~~~~~~a~~~~~~  339 (357)
                      ++.++....  ...++... +.++.++.+....        ..+.+..+++++.++.+.+.. +.|++++++++++.+++
T Consensus       201 ~v~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (288)
T smart00829      201 FVEIGKRDIRDNSQLGMAP-FRRNVSYHAVDLDALEEGPDRIRELLAEVLELFAEGVLRPLPVTVFPISDVEDAFRYMQQ  279 (288)
T ss_pred             EEEEcCcCCccccccchhh-hcCCceEEEEEHHHhhcChHHHHHHHHHHHHHHHCCCccCcCceEEcHHHHHHHHHHHhc
Confidence            999986532  12222222 3445555444321        113467788888888887644 88999999999999999


Q ss_pred             CCccEEEEE
Q 018382          340 NDVRYRFVV  348 (357)
Q Consensus       340 ~~~~Gkvvi  348 (357)
                      ++..||+++
T Consensus       280 ~~~~~~ivv  288 (288)
T smart00829      280 GKHIGKVVL  288 (288)
T ss_pred             CCCcceEeC
Confidence            887788764

Enoylreductase in Polyketide synthases.

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=99.96  E-value=1.4e-29  Score=246.26  Aligned_cols=286  Identities=21%  Similarity=0.259  Sum_probs=236.1

Q ss_pred             cceeeeecC---CCCCCcEEEEEeeeccccchHHHHhcCCCCCCCC-------CccCccccEEEEEeCCCCCCCCCCCEE
Q 018382           22 LSPYTYTLR---NTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYP-------MVPGHEVVGEVKEVGSEVSNFKVGDKV   91 (357)
Q Consensus        22 ~~~~~~~~p---~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p-------~~lG~e~~G~V~~vG~~v~~~~~Gd~V   91 (357)
                      ++..|-+..   +..++.=+.-|-|+++|.+|++...|+.+....|       ++||-|++|+-          .-|.||
T Consensus      1429 lrWies~~~~a~~~~~~~e~CtVYYAplNFRDiMLasGkL~~DAiPG~~a~qdclLGmEFsGRd----------~~GrRv 1498 (2376)
T KOG1202|consen 1429 LRWIESPLRHAQPTCPGLELCTVYYAPLNFRDIMLASGKLSPDAIPGDLASQDCLLGMEFSGRD----------ASGRRV 1498 (2376)
T ss_pred             eeeeecchhhcCCCCCCCceeEEEeccccHHHHHHhcCCCCcccCCCccchhhheeceeecccc----------CCCcEE
Confidence            444444443   3467777889999999999999999988743333       67899999963          449999


Q ss_pred             EEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhhhhhh
Q 018382           92 GVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSP  171 (357)
Q Consensus        92 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~  171 (357)
                      +.++                                   .--++++.+.++.+++|.+|.+.++++|+++|+.|.|||++
T Consensus      1499 M~mv-----------------------------------pAksLATt~l~~rd~lWevP~~WTleeAstVP~VYsTaYYA 1543 (2376)
T KOG1202|consen 1499 MGMV-----------------------------------PAKSLATTVLASRDFLWEVPSKWTLEEASTVPVVYSTAYYA 1543 (2376)
T ss_pred             EEee-----------------------------------ehhhhhhhhhcchhhhhhCCcccchhhcccCceEeeeehhh
Confidence            8653                                   45678999999999999999999999999999999999999


Q ss_pred             hhccCCCCCCCeEEEE-ecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcC---CcEEEcCCChhHHH---Hhh--
Q 018382          172 LSHFGLKQSGLRGGIL-GLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLG---ADQYLVSSDATRMQ---EAA--  242 (357)
Q Consensus       172 l~~~~~~~~~~~VlI~-G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g---~~~vv~~~~~~~~~---~~~--  242 (357)
                      |...+..++|+++||| |+|++|++||.+|.+.|++|+.++.+.+|++++++.|+   ..++-|+++.++..   +-+  
T Consensus      1544 LVvRG~mkkGekiLIHaGsGGVGQAAIaiALa~G~~VFTTVGSaEKRefL~~rFPqLqe~~~~NSRdtsFEq~vl~~T~G 1623 (2376)
T KOG1202|consen 1544 LVVRGQMKKGEKILIHAGSGGVGQAAIAIALAHGCTVFTTVGSAEKREFLLKRFPQLQETNFANSRDTSFEQHVLWHTKG 1623 (2376)
T ss_pred             hhhhccccCCcEEEEecCCCchhHHHHHHHHHcCCEEEEecCcHHHHHHHHHhchhhhhhcccccccccHHHHHHHHhcC
Confidence            9999999999999999 56999999999999999999999999999999998888   56777887755422   222  


Q ss_pred             CCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCcccchH-HHhhccceEEEEeec-----CHHHHHHHHHHHHhc
Q 018382          243 DSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTP-MVMLGRKAITGSFIG-----SMKETKEMLEFCREK  316 (357)
Q Consensus       243 ~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~~~~~i~g~~~~-----~~~~~~~~~~~~~~~  316 (357)
                      +|+|+|+++...+ -+..+++||+.+|+|..+|-..-+...++. ..+.++.+++|....     ..++++++..++++|
T Consensus      1624 rGVdlVLNSLaeE-kLQASiRCLa~~GRFLEIGKfDLSqNspLGMavfLkNvsfHGiLLDsvmege~e~~~ev~~Lv~eG 1702 (2376)
T KOG1202|consen 1624 RGVDLVLNSLAEE-KLQASIRCLALHGRFLEIGKFDLSQNSPLGMAVFLKNVSFHGILLDSVMEGEEEMWREVAALVAEG 1702 (2376)
T ss_pred             CCeeeehhhhhHH-HHHHHHHHHHhcCeeeeecceecccCCcchhhhhhcccceeeeehhhhhcCcHHHHHHHHHHHHhh
Confidence            3899999999988 889999999999999999865433333332 356799999998874     347788888888775


Q ss_pred             ----CCCccE-EEeecccHHHHHHHHHcCCccEEEEEecCCC
Q 018382          317 ----GVTSMI-EVIKMDYVNKAFERLEKNDVRYRFVVDVAGS  353 (357)
Q Consensus       317 ----~l~~~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~~~~  353 (357)
                          .++|.- ++|+-.++++||++|.++++.||||+++..+
T Consensus      1703 IksGvV~PL~ttvF~~~qvE~AFRfMasGKHIGKVvikvr~e 1744 (2376)
T KOG1202|consen 1703 IKSGVVRPLPTTVFHGQQVEDAFRFMASGKHIGKVVIKVRAE 1744 (2376)
T ss_pred             hccCceeccccccccHHHHHHHHHHHhccCccceEEEEEccc
Confidence                555655 8999999999999999999999999998543

>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

Probab=99.96  E-value=7.3e-28  Score=216.57  Aligned_cols=243  Identities=28%  Similarity=0.391  Sum_probs=194.8

Q ss_pred             CCCCccCccccEEEEEeCCCCCCCCCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEe
Q 018382           62 NYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVV  141 (357)
Q Consensus        62 ~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v  141 (357)
                      .+|.++|+|++|+|+++|+++++|++||+|+..                                      +.|++|+.+
T Consensus        19 ~~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~~--------------------------------------~~~~~~~~v   60 (277)
T cd08255          19 PLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFCF--------------------------------------GPHAERVVV   60 (277)
T ss_pred             cCCcccCcceeEEEEEeCCCCCCCCCCCEEEec--------------------------------------CCcceEEEc
Confidence            478999999999999999999999999999642                                      358999999


Q ss_pred             eCcceEECCCCCCccccccccchhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCe-EEEEeCCcHHHHHH
Q 018382          142 DQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHH-VTVISSSDKKRVEA  220 (357)
Q Consensus       142 ~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~-V~~~~~~~~~~~~~  220 (357)
                      +.+.++++|+++++++++.+ ..+.+||+++.. ..++++++++|+|+|.+|++++++|+..|++ |+++++++++.+.+
T Consensus        61 ~~~~~~~ip~~l~~~~aa~~-~~~~ta~~~~~~-~~~~~g~~vlI~g~g~vg~~~i~~a~~~g~~~vi~~~~~~~~~~~~  138 (277)
T cd08255          61 PANLLVPLPDGLPPERAALT-ALAATALNGVRD-AEPRLGERVAVVGLGLVGLLAAQLAKAAGAREVVGVDPDAARRELA  138 (277)
T ss_pred             CHHHeeECcCCCCHHHhHHH-HHHHHHHHHHHh-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEECCCHHHHHHH
Confidence            99999999999999999988 789999999864 5569999999998899999999999999998 99999998888866


Q ss_pred             HHhcC-CcEEEcCCChhHHHHhhCCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCcccchHHHhhccceEEEEe
Q 018382          221 MEHLG-ADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSF  299 (357)
Q Consensus       221 ~~~~g-~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~  299 (357)
                      ++ +| ++++++.....   .-..++|++||+++........+++++++|+++.+|............+..+..++.+..
T Consensus       139 ~~-~g~~~~~~~~~~~~---~~~~~~d~vl~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  214 (277)
T cd08255         139 EA-LGPADPVAADTADE---IGGRGADVVIEASGSPSALETALRLLRDRGRVVLVGWYGLKPLLLGEEFHFKRLPIRSSQ  214 (277)
T ss_pred             HH-cCCCccccccchhh---hcCCCCCEEEEccCChHHHHHHHHHhcCCcEEEEEeccCCCccccHHHHHhccCeEEeec
Confidence            66 89 56665443211   112379999999887657888999999999999998765431111223444555666655


Q ss_pred             ecC------------HHHHHHHHHHHHhcCCCccE-EEeecccHHHHHHHHHcC-CccEEEEE
Q 018382          300 IGS------------MKETKEMLEFCREKGVTSMI-EVIKMDYVNKAFERLEKN-DVRYRFVV  348 (357)
Q Consensus       300 ~~~------------~~~~~~~~~~~~~~~l~~~i-~~~~~~~~~~a~~~~~~~-~~~Gkvvi  348 (357)
                      ...            .+.++++++++.++.+++.+ ++|+++++++|++.++++ ....|+++
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~~~  277 (277)
T cd08255         215 VYGIGRYDRPRRWTEARNLEEALDLLAEGRLEALITHRVPFEDAPEAYRLLFEDPPECLKVVL  277 (277)
T ss_pred             ccccccccccccccccccHHHHHHHHHcCCccccccCccCHHHHHHHHHHHHcCCccceeeeC
Confidence            421            14678899999999988766 899999999999999877 34467653

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD

>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]

Probab=99.94  E-value=7.5e-25  Score=187.44  Aligned_cols=281  Identities=20%  Similarity=0.195  Sum_probs=218.1

Q ss_pred             CCCCCCcEEEEEeeeccccchHHHHhcCCCC-CCCCC-----ccCccccEEEEEeCCCCCCCCCCCEEEEccccCCCCCC
Q 018382           30 RNTGAEDVYIKVLYCGICHTDIHQIKNDLGM-SNYPM-----VPGHEVVGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNC  103 (357)
Q Consensus        30 p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~-~~~p~-----~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~g~~  103 (357)
                      .++++++||||..|.+..|.-...++-..+. .-.|.     +.| ..+|+|++  +...+|++||.|+..         
T Consensus        33 ~~~~s~~vlvknlYLS~DPymR~rM~~~~~~~y~~~~~~G~pi~g-~GV~kVi~--S~~~~~~~GD~v~g~---------  100 (343)
T KOG1196|consen   33 VPLGSGEVLVKNLYLSCDPYMRIRMGKPDPSDYAPPYEPGKPIDG-FGVAKVID--SGHPNYKKGDLVWGI---------  100 (343)
T ss_pred             CCCCCccEEeEeeeecCCHHHHhhccCCCcccccCcccCCcEecC-CceEEEEe--cCCCCCCcCceEEEe---------
Confidence            4579999999999999988643322211111 11122     234 67899999  467789999999743         


Q ss_pred             cccccCcccccccccccCccccCCCCCCCCccceEEEeeCcce--EECC--CCCCccccc-cccchhhhhhhhhhccCCC
Q 018382          104 RPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFV--VKIP--DGMALEQAA-PLLCAGVTVFSPLSHFGLK  178 (357)
Q Consensus       104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~--~~lP--~~l~~~~aa-~~~~~~~ta~~~l~~~~~~  178 (357)
                                                   =+|.||.++++...  +++|  .++++.... ++..+.+|||..+++.+..
T Consensus       101 -----------------------------~gWeeysii~~~~~~~~ki~~~~~~pLs~ylg~lGm~glTAy~Gf~ei~~p  151 (343)
T KOG1196|consen  101 -----------------------------VGWEEYSVITPNDLEHFKIQHPTDVPLSYYLGLLGMPGLTAYAGFYEICSP  151 (343)
T ss_pred             -----------------------------ccceEEEEecCcchhcccCCCCCccCHhhhhhccCCchhHHHHHHHHhcCC
Confidence                                         27899999977544  4443  344444333 5778899999999999988


Q ss_pred             CCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCCh-hHHHHhh----CCccEEEEcC
Q 018382          179 QSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDA-TRMQEAA----DSLDYIIDTV  252 (357)
Q Consensus       179 ~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~-~~~~~~~----~~~d~v~d~~  252 (357)
                      ++|++|+|-|| |++|+.+.|+|+..|++|+.++.++++...++.+||.+..+|+.++ +..+++.    +++|+.||.+
T Consensus       152 k~geTv~VSaAsGAvGql~GQ~Ak~~Gc~VVGsaGS~EKv~ll~~~~G~d~afNYK~e~~~~~aL~r~~P~GIDiYfeNV  231 (343)
T KOG1196|consen  152 KKGETVFVSAASGAVGQLVGQFAKLMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLSAALKRCFPEGIDIYFENV  231 (343)
T ss_pred             CCCCEEEEeeccchhHHHHHHHHHhcCCEEEEecCChhhhhhhHhccCCccceeccCccCHHHHHHHhCCCcceEEEecc
Confidence            99999999987 9999999999999999999999999999999998999999999987 4444444    3899999999


Q ss_pred             CCCCChHHHHhccccCCeEEEEccCCCC-----cc-cchHHHhhccceEEEEeecCH-----HHHHHHHHHHHhcCCCcc
Q 018382          253 PANHPLEPYLSLLKLDGKLILTGVINTP-----MQ-FLTPMVMLGRKAITGSFIGSM-----KETKEMLEFCREKGVTSM  321 (357)
Q Consensus       253 g~~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~-~~~~~~~~~~~~i~g~~~~~~-----~~~~~~~~~~~~~~l~~~  321 (357)
                      |+. .+...+..|+..|+++.+|..+..     .. .+....+.|++++.|+.....     +.++.+..++++|+|+-.
T Consensus       232 GG~-~lDavl~nM~~~gri~~CG~ISqYN~~~~~~~~~l~~ii~Kr~~iqgflv~d~~d~~~k~ld~l~~~ikegKI~y~  310 (343)
T KOG1196|consen  232 GGK-MLDAVLLNMNLHGRIAVCGMISQYNLENPEGLHNLSTIIYKRIRIQGFLVSDYLDKYPKFLDFLLPYIKEGKITYV  310 (343)
T ss_pred             CcH-HHHHHHHhhhhccceEeeeeehhccccCCccccchhhheeeeEEeeeEEeechhhhhHHHHHHHHHHHhcCceEEe
Confidence            999 899999999999999999875421     11 234567889999988776433     345777788888988654


Q ss_pred             EEE-eecccHHHHHHHHHcCCccEEEEEecCC
Q 018382          322 IEV-IKMDYVNKAFERLEKNDVRYRFVVDVAG  352 (357)
Q Consensus       322 i~~-~~~~~~~~a~~~~~~~~~~Gkvvi~~~~  352 (357)
                      -++ -.|+..++||.-|-+++..||.++.+..
T Consensus       311 edi~~Glen~P~A~vglf~GkNvGKqiv~va~  342 (343)
T KOG1196|consen  311 EDIADGLENGPSALVGLFHGKNVGKQLVKVAR  342 (343)
T ss_pred             hhHHHHHhccHHHHHHHhccCcccceEEEeec
Confidence            433 3499999999999999999999998864

>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1

Probab=99.90  E-value=1.6e-23  Score=161.00  Aligned_cols=108  Identities=36%  Similarity=0.630  Sum_probs=93.7

Q ss_pred             CCcEEEEEeeeccccchHHHHhc-CCCCCCCCCccCccccEEEEEeCCCCCCCCCCCEEEEccccCCCCCCcccccCccc
Q 018382           34 AEDVYIKVLYCGICHTDIHQIKN-DLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQ  112 (357)
Q Consensus        34 ~~evlV~v~~~~~~~~D~~~~~g-~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~  112 (357)
                      |+|||||+.++++|++|+++++| ......+|.++|||++|+|+++|+++++|++||+|++.+... |+.|..|..+.++
T Consensus         1 P~eVlVkv~a~gic~~D~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~~-~~~c~~c~~~~~~   79 (109)
T PF08240_consen    1 PGEVLVKVRAAGICGSDLHIREGGPPPPPKFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNIG-CGECEYCLSGRPN   79 (109)
T ss_dssp             TTEEEEEEEEEEE-HHHHHHHTTSSSSTSSSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEEE-TSSSHHHHTTTGG
T ss_pred             CCEEEEEEEEeeeCHHHHHHHhhccccCCCCCcccccceeeeeeeeccccccccccceeeeecccC-ccCchhhcCCccc
Confidence            68999999999999999999999 345678899999999999999999999999999997766555 9999999999999


Q ss_pred             ccccccccCccccCCCCCCCCccceEEEeeCcceEEC
Q 018382          113 YCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKI  149 (357)
Q Consensus       113 ~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~l  149 (357)
                      .|+.....       |...+|+|+||+++++++++|+
T Consensus        80 ~c~~~~~~-------g~~~~G~~aey~~v~~~~~~~v  109 (109)
T PF08240_consen   80 LCPNPEVL-------GLGLDGGFAEYVVVPARNLVPV  109 (109)
T ss_dssp             GTTTBEET-------TTSSTCSSBSEEEEEGGGEEEE
T ss_pred             cCCCCCEe-------EcCCCCcccCeEEEehHHEEEC
Confidence            99876655       3347999999999999999875

1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....

>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1

Probab=99.71  E-value=1.1e-16  Score=127.07  Aligned_cols=124  Identities=33%  Similarity=0.499  Sum_probs=110.0

Q ss_pred             hHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHH---HhhC--CccEEEEcCCCCCChHHHHhcc
Q 018382          191 GVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQ---EAAD--SLDYIIDTVPANHPLEPYLSLL  265 (357)
Q Consensus       191 ~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~---~~~~--~~d~v~d~~g~~~~~~~~~~~l  265 (357)
                      ++|++++|+|+..|++|+++++++++.+.+++ +|+++++++++.+..+   ++.+  ++|+||||+|....++.+++++
T Consensus         1 ~vG~~a~q~ak~~G~~vi~~~~~~~k~~~~~~-~Ga~~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l   79 (130)
T PF00107_consen    1 GVGLMAIQLAKAMGAKVIATDRSEEKLELAKE-LGADHVIDYSDDDFVEQIRELTGGRGVDVVIDCVGSGDTLQEAIKLL   79 (130)
T ss_dssp             HHHHHHHHHHHHTTSEEEEEESSHHHHHHHHH-TTESEEEETTTSSHHHHHHHHTTTSSEEEEEESSSSHHHHHHHHHHE
T ss_pred             ChHHHHHHHHHHcCCEEEEEECCHHHHHHHHh-hcccccccccccccccccccccccccceEEEEecCcHHHHHHHHHHh
Confidence            58999999999999999999999999999888 9999999998865444   4444  6999999999666899999999


Q ss_pred             ccCCeEEEEccCC-CCcccchHHHhhccceEEEEeecCHHHHHHHHHHHHh
Q 018382          266 KLDGKLILTGVIN-TPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCRE  315 (357)
Q Consensus       266 ~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~  315 (357)
                      +++|+++.+|... ....++...++.+++++.+++.++.++++++++++.+
T Consensus        80 ~~~G~~v~vg~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~la~  130 (130)
T PF00107_consen   80 RPGGRIVVVGVYGGDPISFNLMNLMFKEITIRGSWGGSPEDFQEALQLLAQ  130 (130)
T ss_dssp             EEEEEEEEESSTSTSEEEEEHHHHHHTTEEEEEESSGGHHHHHHHHHHHH-
T ss_pred             ccCCEEEEEEccCCCCCCCCHHHHHhCCcEEEEEccCCHHHHHHHHHHhcC
Confidence            9999999999987 5567888899999999999999999999999998864

1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....

>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A

Probab=99.52  E-value=2.4e-14  Score=113.05  Aligned_cols=117  Identities=26%  Similarity=0.345  Sum_probs=79.1

Q ss_pred             cCCcEEEcCCChhHHHHhhCCccEEEEcCC--CCCChHHHHhccccCCeEEEEccCCCCcccchHHHhhccceEEEEeec
Q 018382          224 LGADQYLVSSDATRMQEAADSLDYIIDTVP--ANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIG  301 (357)
Q Consensus       224 ~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g--~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~  301 (357)
                      +|+++++|+++.++  .-.+++|+|||++|  ....+..++++| ++|+++.++.     .........+...+.+....
T Consensus         1 LGAd~vidy~~~~~--~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~G~~v~i~~-----~~~~~~~~~~~~~~~~~~~~   72 (127)
T PF13602_consen    1 LGADEVIDYRDTDF--AGPGGVDVVIDTVGQTGESLLDASRKLL-PGGRVVSIGG-----DLPSFARRLKGRSIRYSFLF   72 (127)
T ss_dssp             CT-SEEEETTCSHH--HTTS-EEEEEESS-CCHHHCGGGCCCTE-EEEEEEEE-S-----HHHHHHHHHHCHHCEEECCC
T ss_pred             CCcCEEecCCCccc--cCCCCceEEEECCCCccHHHHHHHHHHC-CCCEEEEECC-----cccchhhhhcccceEEEEEE
Confidence            68999999997666  33469999999999  443446777788 9999999874     11111111122233333322


Q ss_pred             -------CHHHHHHHHHHHHhcCCCccE-EEeecccHHHHHHHHHcCCccEEEEE
Q 018382          302 -------SMKETKEMLEFCREKGVTSMI-EVIKMDYVNKAFERLEKNDVRYRFVV  348 (357)
Q Consensus       302 -------~~~~~~~~~~~~~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi  348 (357)
                             ..+.++++.+++++|+|++++ ++|+++++.+|++.+++++..||+|+
T Consensus        73 ~~~~~~~~~~~l~~l~~l~~~G~l~~~i~~~f~l~~~~~A~~~l~~~~~~GKvVl  127 (127)
T PF13602_consen   73 SVDPNAIRAEALEELAELVAEGKLKPPIDRVFPLEEAPEAHERLESGHARGKVVL  127 (127)
T ss_dssp             -H--HHHHHHHHHHHHHHHHTTSS---EEEEEEGGGHHHHHHHHHCT--SSEEEE
T ss_pred             ecCCCchHHHHHHHHHHHHHCCCeEEeeccEECHHHHHHHHHHHHhCCCCCeEeC
Confidence                   234589999999999999999 89999999999999999999999986

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=99.47  E-value=7.5e-13  Score=123.14  Aligned_cols=174  Identities=12%  Similarity=0.041  Sum_probs=135.5

Q ss_pred             hhhhhhcc-CCCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCcc
Q 018382          168 VFSPLSHF-GLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLD  246 (357)
Q Consensus       168 a~~~l~~~-~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d  246 (357)
                      .|.++.+. +..-+|++|+|+|+|.+|+.+++.++..|++|+++..++.+...+.+ +|++.+ +.      ++...++|
T Consensus       188 ~~~~i~r~t~~~l~GktVvViG~G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~~-~G~~~~-~~------~e~v~~aD  259 (413)
T cd00401         188 LIDGIKRATDVMIAGKVAVVAGYGDVGKGCAQSLRGQGARVIVTEVDPICALQAAM-EGYEVM-TM------EEAVKEGD  259 (413)
T ss_pred             hHHHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECChhhHHHHHh-cCCEEc-cH------HHHHcCCC
Confidence            34444443 44468999999999999999999999999999999998888888877 898543 21      23335789


Q ss_pred             EEEEcCCCCCChHHH-HhccccCCeEEEEccCCCCcccchHHHhhccceEEEEeecCHH-HHH--HHHHHHHhcCC---C
Q 018382          247 YIIDTVPANHPLEPY-LSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSMK-ETK--EMLEFCREKGV---T  319 (357)
Q Consensus       247 ~v~d~~g~~~~~~~~-~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~-~~~--~~~~~~~~~~l---~  319 (357)
                      +||+++|....+... ++.++++|+++.+|..  ...++...+..+.+++.++..+..+ .|+  ..+.++.+|.+   .
T Consensus       260 VVI~atG~~~~i~~~~l~~mk~GgilvnvG~~--~~eId~~~L~~~el~i~g~~~~~~~~~~~~g~aI~LLa~Grlvnl~  337 (413)
T cd00401         260 IFVTTTGNKDIITGEHFEQMKDGAIVCNIGHF--DVEIDVKGLKENAVEVVNIKPQVDRYELPDGRRIILLAEGRLVNLG  337 (413)
T ss_pred             EEEECCCCHHHHHHHHHhcCCCCcEEEEeCCC--CCccCHHHHHhhccEEEEccCCcceEEcCCcchhhhhhCcCCCCCc
Confidence            999999988667765 9999999999999854  3557777788888999998876543 455  78999999988   2


Q ss_pred             ccE-EE-----eecc-cHHHHHHHHHcCCcc-EEEEEecC
Q 018382          320 SMI-EV-----IKMD-YVNKAFERLEKNDVR-YRFVVDVA  351 (357)
Q Consensus       320 ~~i-~~-----~~~~-~~~~a~~~~~~~~~~-Gkvvi~~~  351 (357)
                      +.+ |.     |+|+ |+.++++.+.++... -|+++.+.
T Consensus       338 ~~~gH~~~vmd~sf~~q~l~a~~l~~~~~~~~~kV~~~p~  377 (413)
T cd00401         338 CATGHPSFVMSNSFTNQVLAQIELWTNRDKYEVGVYFLPK  377 (413)
T ss_pred             ccCCCccceechhHHHHHHHHHHHHhcCCcCCCcEEECCH
Confidence            334 66     8899 999999999876543 46666553

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=99.34  E-value=3.3e-11  Score=114.99  Aligned_cols=141  Identities=14%  Similarity=0.095  Sum_probs=108.7

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEE-EcCCCh-------------hHHH----H
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQY-LVSSDA-------------TRMQ----E  240 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~v-v~~~~~-------------~~~~----~  240 (357)
                      .++++|+|+|+|++|+++++.|+.+|++|++++.++++++.+++ +|++.+ +|..+.             +..+    .
T Consensus       163 ~pg~kVlViGaG~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~aes-lGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~~  241 (509)
T PRK09424        163 VPPAKVLVIGAGVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVES-MGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMAL  241 (509)
T ss_pred             cCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCCeEEEeccccccccccchhhhcchhHHHHHHHH
Confidence            68999999999999999999999999999999999999998888 999854 554321             1111    1


Q ss_pred             hh---CCccEEEEcCCCCC-----C-hHHHHhccccCCeEEEEccCC-CC--cccchHHHhh-ccceEEEEeecCHHHHH
Q 018382          241 AA---DSLDYIIDTVPANH-----P-LEPYLSLLKLDGKLILTGVIN-TP--MQFLTPMVML-GRKAITGSFIGSMKETK  307 (357)
Q Consensus       241 ~~---~~~d~v~d~~g~~~-----~-~~~~~~~l~~~G~~v~~g~~~-~~--~~~~~~~~~~-~~~~i~g~~~~~~~~~~  307 (357)
                      +.   +++|+||+|++.+.     . .+..++.++++|++++++... +.  ...+...++. +++++.|.+....+...
T Consensus       242 ~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg~~~GG~~e~t~~~~~v~~~~gVti~Gv~n~P~~~p~  321 (509)
T PRK09424        242 FAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLAAENGGNCELTVPGEVVVTDNGVTIIGYTDLPSRLPT  321 (509)
T ss_pred             HHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEccCCCCCcccccCccceEeECCEEEEEeCCCchhHHH
Confidence            11   47999999998632     4 489999999999999998853 32  3333344554 89999998876645555


Q ss_pred             HHHHHHHhcCCCc
Q 018382          308 EMLEFCREKGVTS  320 (357)
Q Consensus       308 ~~~~~~~~~~l~~  320 (357)
                      ++.+++.++.+..
T Consensus       322 ~As~lla~~~i~l  334 (509)
T PRK09424        322 QSSQLYGTNLVNL  334 (509)
T ss_pred             HHHHHHHhCCccH
Confidence            7899999987753

>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed

Probab=98.64  E-value=2.8e-07  Score=82.58  Aligned_cols=164  Identities=15%  Similarity=0.190  Sum_probs=100.1

Q ss_pred             CCCCCeEEEEecChHHHHHHHHHHHcCC--eEEEEeCCcHHHHHHHHh---cCCcEEEcCCChhHHHHh---hCCccEEE
Q 018382          178 KQSGLRGGILGLGGVGHMGVLIAKAMGH--HVTVISSSDKKRVEAMEH---LGADQYLVSSDATRMQEA---ADSLDYII  249 (357)
Q Consensus       178 ~~~~~~VlI~G~g~~G~~ai~la~~~g~--~V~~~~~~~~~~~~~~~~---~g~~~vv~~~~~~~~~~~---~~~~d~v~  249 (357)
                      ++++++||.+|+|. |..++++++..+.  +|++++.+++..+.+++.   .|.+.+ .....+ +..+   .+.+|+|+
T Consensus        75 ~~~g~~VLDiG~G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v-~~~~~d-~~~l~~~~~~fD~Vi  151 (272)
T PRK11873         75 LKPGETVLDLGSGG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNV-EFRLGE-IEALPVADNSVDVII  151 (272)
T ss_pred             CCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCE-EEEEcc-hhhCCCCCCceeEEE
Confidence            48999999999977 8888888887775  699999998887777652   343222 111111 2222   23799998


Q ss_pred             EcCC------CCCChHHHHhccccCCeEEEEccCCCCcccchHHHhhccceEEEEeecCHHHHHHHHHHHHhcCCCc---
Q 018382          250 DTVP------ANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTS---  320 (357)
Q Consensus       250 d~~g------~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~---  320 (357)
                      ....      ....++.+.+.|+|+|+++..+..... ..+  ..+.+...+.+..........++.+++++..+..   
T Consensus       152 ~~~v~~~~~d~~~~l~~~~r~LkpGG~l~i~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~e~~~~l~~aGf~~v~i  228 (272)
T PRK11873        152 SNCVINLSPDKERVFKEAFRVLKPGGRFAISDVVLRG-ELP--EEIRNDAELYAGCVAGALQEEEYLAMLAEAGFVDITI  228 (272)
T ss_pred             EcCcccCCCCHHHHHHHHHHHcCCCcEEEEEEeeccC-CCC--HHHHHhHHHHhccccCCCCHHHHHHHHHHCCCCceEE
Confidence            5431      123578899999999999987654322 111  1111222222221222234556667777754443   


Q ss_pred             cE-EEeecccHHHHHHHH--HcCCccEEEE
Q 018382          321 MI-EVIKMDYVNKAFERL--EKNDVRYRFV  347 (357)
Q Consensus       321 ~i-~~~~~~~~~~a~~~~--~~~~~~Gkvv  347 (357)
                      .. +.++++++.++++.+  .+++..++.+
T Consensus       229 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  258 (272)
T PRK11873        229 QPKREYRIPDAREFLEDWGIAPGRQLDGYI  258 (272)
T ss_pred             EeccceecccHHHHHHHhccccccccCceE
Confidence            23 578899999999988  5555445444

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=98.62  E-value=7.4e-07  Score=85.24  Aligned_cols=100  Identities=16%  Similarity=0.179  Sum_probs=78.0

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEE-EcCCC-------------hhH-------
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQY-LVSSD-------------ATR-------  237 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~v-v~~~~-------------~~~-------  237 (357)
                      .++.+|+|+|+|.+|+++++.++.+|++|++.+.++++++.+++ +|++.+ ++..+             .+.       
T Consensus       162 vp~akVlViGaG~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~~-lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~  240 (511)
T TIGR00561       162 VPPAKVLVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQS-MGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMEL  240 (511)
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCCeEEeccccccccccccceeecCHHHHHHHHHH
Confidence            46789999999999999999999999999999999999888888 998763 33211             111       


Q ss_pred             HHHhhCCccEEEEcC---CCCC---ChHHHHhccccCCeEEEEccCCC
Q 018382          238 MQEAADSLDYIIDTV---PANH---PLEPYLSLLKLDGKLILTGVINT  279 (357)
Q Consensus       238 ~~~~~~~~d~v~d~~---g~~~---~~~~~~~~l~~~G~~v~~g~~~~  279 (357)
                      ..+...++|++|+|+   |...   ..+...+.|++++.+++++...+
T Consensus       241 ~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpGsvIVDlA~d~G  288 (511)
T TIGR00561       241 FAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAGSVIVDLAAEQG  288 (511)
T ss_pred             HHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCCCEEEEeeeCCC
Confidence            122234799999999   6532   45778999999999999976543

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=98.58  E-value=3.1e-06  Score=76.47  Aligned_cols=111  Identities=21%  Similarity=0.200  Sum_probs=84.0

Q ss_pred             CCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCCChH
Q 018382          180 SGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLE  259 (357)
Q Consensus       180 ~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~~~  259 (357)
                      .+++|+|+|.|.+|+.+++.++.+|++|++..++.++.+++.+ +|.+.+ .   .+.+.+....+|+||++++.....+
T Consensus       151 ~g~kvlViG~G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~~~-~G~~~~-~---~~~l~~~l~~aDiVI~t~p~~~i~~  225 (296)
T PRK08306        151 HGSNVLVLGFGRTGMTLARTLKALGANVTVGARKSAHLARITE-MGLSPF-H---LSELAEEVGKIDIIFNTIPALVLTK  225 (296)
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-cCCeee-c---HHHHHHHhCCCCEEEECCChhhhhH
Confidence            6899999999999999999999999999999999888777766 886543 2   1233445568999999987653445


Q ss_pred             HHHhccccCCeEEEEccCCCCcccchHHHhhccceEEE
Q 018382          260 PYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITG  297 (357)
Q Consensus       260 ~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g  297 (357)
                      ..++.+++++.+++++...+.+.+.  ..-.+..+..+
T Consensus       226 ~~l~~~~~g~vIIDla~~pggtd~~--~a~~~Gv~~~~  261 (296)
T PRK08306        226 EVLSKMPPEALIIDLASKPGGTDFE--YAEKRGIKALL  261 (296)
T ss_pred             HHHHcCCCCcEEEEEccCCCCcCee--ehhhCCeEEEE
Confidence            6778899999999998877666653  22234444443

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=98.53  E-value=1.2e-06  Score=82.24  Aligned_cols=106  Identities=17%  Similarity=0.164  Sum_probs=82.3

Q ss_pred             hhhhhhhhccCCC-CCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCC
Q 018382          166 VTVFSPLSHFGLK-QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADS  244 (357)
Q Consensus       166 ~ta~~~l~~~~~~-~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~  244 (357)
                      ..+|.++..+..+ -+|++|+|+|.|.+|..+++.++.+|++|+++.+++.+...+.. .|.. +.+      +++...+
T Consensus       196 ~s~~~ai~rat~~~l~Gk~VlViG~G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~~-~G~~-v~~------l~eal~~  267 (425)
T PRK05476        196 ESLLDGIKRATNVLIAGKVVVVAGYGDVGKGCAQRLRGLGARVIVTEVDPICALQAAM-DGFR-VMT------MEEAAEL  267 (425)
T ss_pred             hhhHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCchhhHHHHh-cCCE-ecC------HHHHHhC
Confidence            4456666666333 48999999999999999999999999999999988877666655 6754 222      2334458


Q ss_pred             ccEEEEcCCCCCChH-HHHhccccCCeEEEEccCCC
Q 018382          245 LDYIIDTVPANHPLE-PYLSLLKLDGKLILTGVINT  279 (357)
Q Consensus       245 ~d~v~d~~g~~~~~~-~~~~~l~~~G~~v~~g~~~~  279 (357)
                      +|+||+++|....+. ..++.+++++.++..|....
T Consensus       268 aDVVI~aTG~~~vI~~~~~~~mK~GailiNvG~~d~  303 (425)
T PRK05476        268 GDIFVTATGNKDVITAEHMEAMKDGAILANIGHFDN  303 (425)
T ss_pred             CCEEEECCCCHHHHHHHHHhcCCCCCEEEEcCCCCC
Confidence            999999999875565 68899999999999987653

>TIGR00518 alaDH alanine dehydrogenase

Probab=98.44  E-value=6e-06  Score=76.99  Aligned_cols=99  Identities=18%  Similarity=0.204  Sum_probs=75.8

Q ss_pred             CCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcC---CC--
Q 018382          180 SGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTV---PA--  254 (357)
Q Consensus       180 ~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~---g~--  254 (357)
                      ++.+|+|+|+|.+|+.+++.++.+|++|+++++++++.+.+.+.++........+.+.+.+....+|++|+++   +.  
T Consensus       166 ~~~~VlViGaG~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~~l~~aDvVI~a~~~~g~~~  245 (370)
T TIGR00518       166 EPGDVTIIGGGVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGGRIHTRYSNAYEIEDAVKRADLLIGAVLIPGAKA  245 (370)
T ss_pred             CCceEEEEcCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCceeEeccCCHHHHHHHHccCCEEEEccccCCCCC
Confidence            3456999999999999999999999999999999888887776677643333444445555566899999997   32  


Q ss_pred             CC-ChHHHHhccccCCeEEEEccCC
Q 018382          255 NH-PLEPYLSLLKLDGKLILTGVIN  278 (357)
Q Consensus       255 ~~-~~~~~~~~l~~~G~~v~~g~~~  278 (357)
                      .. .....++.+++++.+++++...
T Consensus       246 p~lit~~~l~~mk~g~vIvDva~d~  270 (370)
T TIGR00518       246 PKLVSNSLVAQMKPGAVIVDVAIDQ  270 (370)
T ss_pred             CcCcCHHHHhcCCCCCEEEEEecCC
Confidence            11 2367888899999999987654

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PLN02494 adenosylhomocysteinase

Probab=98.38  E-value=7.6e-06  Score=77.13  Aligned_cols=102  Identities=18%  Similarity=0.169  Sum_probs=79.2

Q ss_pred             hhhhhccC-CCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccE
Q 018382          169 FSPLSHFG-LKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDY  247 (357)
Q Consensus       169 ~~~l~~~~-~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~  247 (357)
                      +.++.+.. ..-.|++|+|+|.|.+|...++.++.+|++|+++.+++.+...+.. .|...+ +      +.+.....|+
T Consensus       241 ~d~i~r~t~i~LaGKtVvViGyG~IGr~vA~~aka~Ga~VIV~e~dp~r~~eA~~-~G~~vv-~------leEal~~ADV  312 (477)
T PLN02494        241 PDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKAAGARVIVTEIDPICALQALM-EGYQVL-T------LEDVVSEADI  312 (477)
T ss_pred             HHHHHHhcCCccCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCchhhHHHHh-cCCeec-c------HHHHHhhCCE
Confidence            44554443 3357999999999999999999999999999999888777656655 676532 1      2233457899


Q ss_pred             EEEcCCCCCCh-HHHHhccccCCeEEEEccCC
Q 018382          248 IIDTVPANHPL-EPYLSLLKLDGKLILTGVIN  278 (357)
Q Consensus       248 v~d~~g~~~~~-~~~~~~l~~~G~~v~~g~~~  278 (357)
                      ++++.|....+ ...++.|++++.++.+|-..
T Consensus       313 VI~tTGt~~vI~~e~L~~MK~GAiLiNvGr~~  344 (477)
T PLN02494        313 FVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFD  344 (477)
T ss_pred             EEECCCCccchHHHHHhcCCCCCEEEEcCCCC
Confidence            99999987554 78999999999999998743

>TIGR00936 ahcY adenosylhomocysteinase

Probab=98.30  E-value=6.6e-06  Score=76.82  Aligned_cols=103  Identities=19%  Similarity=0.167  Sum_probs=78.8

Q ss_pred             hhhhhhcc-CCCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCcc
Q 018382          168 VFSPLSHF-GLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLD  246 (357)
Q Consensus       168 a~~~l~~~-~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d  246 (357)
                      +|.++.+. ....+|++|+|+|.|.+|+..++.++.+|++|+++..++.+...+.. .|+. +.+.      ++...+.|
T Consensus       181 ~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~ak~~Ga~ViV~d~dp~r~~~A~~-~G~~-v~~l------eeal~~aD  252 (406)
T TIGR00936       181 TIDGILRATNLLIAGKTVVVAGYGWCGKGIAMRARGMGARVIVTEVDPIRALEAAM-DGFR-VMTM------EEAAKIGD  252 (406)
T ss_pred             HHHHHHHhcCCCCCcCEEEEECCCHHHHHHHHHHhhCcCEEEEEeCChhhHHHHHh-cCCE-eCCH------HHHHhcCC
Confidence            44445454 33368999999999999999999999999999999888777655555 6763 3221      22335789


Q ss_pred             EEEEcCCCCCChHH-HHhccccCCeEEEEccCC
Q 018382          247 YIIDTVPANHPLEP-YLSLLKLDGKLILTGVIN  278 (357)
Q Consensus       247 ~v~d~~g~~~~~~~-~~~~l~~~G~~v~~g~~~  278 (357)
                      ++|+++|....++. .+..+++++.++.+|-..
T Consensus       253 VVItaTG~~~vI~~~~~~~mK~GailiN~G~~~  285 (406)
T TIGR00936       253 IFITATGNKDVIRGEHFENMKDGAIVANIGHFD  285 (406)
T ss_pred             EEEECCCCHHHHHHHHHhcCCCCcEEEEECCCC
Confidence            99999998866664 889999999999987653

This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=98.23  E-value=2.6e-05  Score=70.11  Aligned_cols=99  Identities=23%  Similarity=0.258  Sum_probs=77.0

Q ss_pred             CCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCCChH
Q 018382          180 SGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLE  259 (357)
Q Consensus       180 ~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~~~  259 (357)
                      .|++++|+|.|.+|.++++.++..|++|++..+++++...+.+ +|...+ .   .+.+.+....+|+||++++....-.
T Consensus       150 ~gk~v~IiG~G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~~~-~g~~~~-~---~~~l~~~l~~aDiVint~P~~ii~~  224 (287)
T TIGR02853       150 HGSNVMVLGFGRTGMTIARTFSALGARVFVGARSSADLARITE-MGLIPF-P---LNKLEEKVAEIDIVINTIPALVLTA  224 (287)
T ss_pred             CCCEEEEEcChHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-CCCeee-c---HHHHHHHhccCCEEEECCChHHhCH
Confidence            5789999999999999999999999999999999887776665 665422 1   1223445568999999987652234


Q ss_pred             HHHhccccCCeEEEEccCCCCccc
Q 018382          260 PYLSLLKLDGKLILTGVINTPMQF  283 (357)
Q Consensus       260 ~~~~~l~~~G~~v~~g~~~~~~~~  283 (357)
                      ..++.++++..+++++..++.++|
T Consensus       225 ~~l~~~k~~aliIDlas~Pg~tdf  248 (287)
T TIGR02853       225 DVLSKLPKHAVIIDLASKPGGTDF  248 (287)
T ss_pred             HHHhcCCCCeEEEEeCcCCCCCCH
Confidence            577888998889999887776766

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=98.17  E-value=1.9e-07  Score=88.53  Aligned_cols=160  Identities=19%  Similarity=0.282  Sum_probs=105.2

Q ss_pred             ccCccccEEEEEeCCCCCCCCCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcc
Q 018382           66 VPGHEVVGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKF  145 (357)
Q Consensus        66 ~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~  145 (357)
                      .-|.|+++.+.+|+++++..-+|+     +.+  ||-|..|    ++.|.+.+..       |...++.|++++.++. .
T Consensus        89 ~~~~~a~~hl~~Va~GldS~V~GE-----~qI--~gQvk~a----~~~a~~~~~~-------g~~l~~lf~~a~~~~k-~  149 (417)
T TIGR01035        89 LTGESAVEHLFRVASGLDSMVVGE-----TQI--LGQVKNA----YKVAQEEKTV-------GKVLERLFQKAFSVGK-R  149 (417)
T ss_pred             cCchHHHHHHHHHHhhhhhhhcCC-----hHH--HHHHHHH----HHHHHHcCCc-------hHHHHHHHHHHHHHhh-h
Confidence            358999999999999988744444     333  7777777    5555544333       2335788999987765 2


Q ss_pred             eEE---C-CCCCCccccccccchhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHH
Q 018382          146 VVK---I-PDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEA  220 (357)
Q Consensus       146 ~~~---l-P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~  220 (357)
                      +..   + +..+|...+|        .-.+....+. .++++|+|+|+|.+|..+++.++..|+ +|+++.++.++...+
T Consensus       150 vr~~t~i~~~~vSv~~~A--------v~la~~~~~~-l~~~~VlViGaG~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~l  220 (417)
T TIGR01035       150 VRTETDISAGAVSISSAA--------VELAERIFGS-LKGKKALLIGAGEMGELVAKHLLRKGVGKILIANRTYERAEDL  220 (417)
T ss_pred             hhhhcCCCCCCcCHHHHH--------HHHHHHHhCC-ccCCEEEEECChHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHH
Confidence            221   2 2222222221        1112222333 578999999999999999999999995 899999998887656


Q ss_pred             HHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCCC
Q 018382          221 MEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHP  257 (357)
Q Consensus       221 ~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~  257 (357)
                      .+.+|... ++.   +...+...++|+||+|++....
T Consensus       221 a~~~g~~~-i~~---~~l~~~l~~aDvVi~aT~s~~~  253 (417)
T TIGR01035       221 AKELGGEA-VKF---EDLEEYLAEADIVISSTGAPHP  253 (417)
T ss_pred             HHHcCCeE-eeH---HHHHHHHhhCCEEEECCCCCCc
Confidence            55588643 322   2233444589999999987643

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=98.09  E-value=1.3e-05  Score=73.21  Aligned_cols=109  Identities=17%  Similarity=0.177  Sum_probs=79.8

Q ss_pred             cceEECCCCCCccccccccchhhhhhhhhhccCCC---CCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHH
Q 018382          144 KFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLK---QSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVE  219 (357)
Q Consensus       144 ~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~---~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~  219 (357)
                      ...+++|+.+..+.++... +.+.++.++..+...   -++.+|+|+|+|.+|..+++.++..|+ +|+++.++.++...
T Consensus       139 ~~a~~~~k~vr~et~i~~~-~~sv~~~Av~~a~~~~~~l~~~~V~ViGaG~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~  217 (311)
T cd05213         139 QKAIKVGKRVRTETGISRG-AVSISSAAVELAEKIFGNLKGKKVLVIGAGEMGELAAKHLAAKGVAEITIANRTYERAEE  217 (311)
T ss_pred             HHHHHHHHHHhhhcCCCCC-CcCHHHHHHHHHHHHhCCccCCEEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHH
Confidence            4567888888888877554 445566666544432   378999999999999999999998776 78899998888766


Q ss_pred             HHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCCC
Q 018382          220 AMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHP  257 (357)
Q Consensus       220 ~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~  257 (357)
                      +.+++|.. +++.   +.+.+....+|+||.+++....
T Consensus       218 la~~~g~~-~~~~---~~~~~~l~~aDvVi~at~~~~~  251 (311)
T cd05213         218 LAKELGGN-AVPL---DELLELLNEADVVISATGAPHY  251 (311)
T ss_pred             HHHHcCCe-EEeH---HHHHHHHhcCCEEEECCCCCch
Confidence            66668874 3332   2233344579999999998844

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=98.09  E-value=3.4e-05  Score=73.05  Aligned_cols=125  Identities=12%  Similarity=0.130  Sum_probs=86.5

Q ss_pred             ceEECCCCCCccccc-cccchhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh
Q 018382          145 FVVKIPDGMALEQAA-PLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH  223 (357)
Q Consensus       145 ~~~~lP~~l~~~~aa-~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~  223 (357)
                      .++.+|+..+-..+- ++.+..+++-..++..+..-.|++|+|+|.|.+|..+++.++.+|++|+++.+++.+...+.. 
T Consensus       217 PV~nv~d~~tk~~aD~~~G~~~s~~d~~~R~~~~~LaGKtVgVIG~G~IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A~~-  295 (476)
T PTZ00075        217 PAINVNDSVTKSKFDNIYGCRHSLIDGIFRATDVMIAGKTVVVCGYGDVGKGCAQALRGFGARVVVTEIDPICALQAAM-  295 (476)
T ss_pred             eEEEeCCcchHHHHHHHHHHHHHHHHHHHHhcCCCcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHh-
Confidence            445566654433222 233222222222333344457999999999999999999999999999998877666544444 


Q ss_pred             cCCcEEEcCCChhHHHHhhCCccEEEEcCCCCCChH-HHHhccccCCeEEEEccC
Q 018382          224 LGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLE-PYLSLLKLDGKLILTGVI  277 (357)
Q Consensus       224 ~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~~~-~~~~~l~~~G~~v~~g~~  277 (357)
                      .|+..+       .+.++....|+|+.++|....+. ..++.|++++.++.+|-.
T Consensus       296 ~G~~~~-------~leell~~ADIVI~atGt~~iI~~e~~~~MKpGAiLINvGr~  343 (476)
T PTZ00075        296 EGYQVV-------TLEDVVETADIFVTATGNKDIITLEHMRRMKNNAIVGNIGHF  343 (476)
T ss_pred             cCceec-------cHHHHHhcCCEEEECCCcccccCHHHHhccCCCcEEEEcCCC
Confidence            565422       13445568999999999876664 799999999999998765

>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional

Probab=98.09  E-value=4.2e-06  Score=82.87  Aligned_cols=96  Identities=19%  Similarity=0.243  Sum_probs=67.2

Q ss_pred             CCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCC---------------------cHHHHHHHHhcCCcEEEcCCC-h
Q 018382          178 KQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSS---------------------DKKRVEAMEHLGADQYLVSSD-A  235 (357)
Q Consensus       178 ~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~---------------------~~~~~~~~~~~g~~~vv~~~~-~  235 (357)
                      ..+|++|+|+|+|+.|+++++.++..|++|+++...                     +.+.+.+++ +|++..++... .
T Consensus       134 ~~~g~~V~VIGaGpaGL~aA~~l~~~G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~-~Gv~~~~~~~~~~  212 (564)
T PRK12771        134 PDTGKRVAVIGGGPAGLSAAYHLRRMGHAVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILD-LGVEVRLGVRVGE  212 (564)
T ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHH-CCCEEEeCCEECC
Confidence            378999999999999999999999999999998743                     234556666 89877666433 1


Q ss_pred             h-HHHHhhCCccEEEEcCCCCCChHHHHhccccCCeEEEE
Q 018382          236 T-RMQEAADSLDYIIDTVPANHPLEPYLSLLKLDGKLILT  274 (357)
Q Consensus       236 ~-~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~  274 (357)
                      + ....+..++|+||+++|........+......|.+..+
T Consensus       213 ~~~~~~~~~~~D~Vi~AtG~~~~~~~~i~g~~~~gv~~~~  252 (564)
T PRK12771        213 DITLEQLEGEFDAVFVAIGAQLGKRLPIPGEDAAGVLDAV  252 (564)
T ss_pred             cCCHHHHHhhCCEEEEeeCCCCCCcCCCCCCccCCcEEHH
Confidence            1 12334457999999999864333344444455554433

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=98.06  E-value=1.5e-05  Score=63.27  Aligned_cols=95  Identities=22%  Similarity=0.320  Sum_probs=66.7

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCc--EEEcCCChhHHHHhhCCccEEEEcCCCC
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGAD--QYLVSSDATRMQEAADSLDYIIDTVPAN  255 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~--~vv~~~~~~~~~~~~~~~d~v~d~~g~~  255 (357)
                      -++++++|+|+|++|.+++..+...|+ +|+++.|+.++.+.+.+.++..  .+++..+   +.+....+|+||+|++..
T Consensus        10 l~~~~vlviGaGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~---~~~~~~~~DivI~aT~~~   86 (135)
T PF01488_consen   10 LKGKRVLVIGAGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLED---LEEALQEADIVINATPSG   86 (135)
T ss_dssp             GTTSEEEEESSSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGG---HCHHHHTESEEEE-SSTT
T ss_pred             cCCCEEEEECCHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHH---HHHHHhhCCeEEEecCCC
Confidence            468999999999999999999999999 5999999999998888878532  2344333   224445899999998876


Q ss_pred             CChHHHHhccccC----CeEEEEccC
Q 018382          256 HPLEPYLSLLKLD----GKLILTGVI  277 (357)
Q Consensus       256 ~~~~~~~~~l~~~----G~~v~~g~~  277 (357)
                      .. ......+...    +.+++++.+
T Consensus        87 ~~-~i~~~~~~~~~~~~~~v~Dla~P  111 (135)
T PF01488_consen   87 MP-IITEEMLKKASKKLRLVIDLAVP  111 (135)
T ss_dssp             ST-SSTHHHHTTTCHHCSEEEES-SS
T ss_pred             Cc-ccCHHHHHHHHhhhhceeccccC
Confidence            32 2222233333    577777653

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PRK08324 short chain dehydrogenase; Validated

Probab=97.98  E-value=3.5e-05  Score=78.01  Aligned_cols=111  Identities=18%  Similarity=0.168  Sum_probs=77.3

Q ss_pred             CccceEEEeeCcceEECCCCCCccccccccchhhhhhhhhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEe
Q 018382          133 GGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVIS  211 (357)
Q Consensus       133 G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~  211 (357)
                      -++++|..+++..++.+ +.++++++..-...         .... .+|+++||+|+ |++|.++++.+...|++|++++
T Consensus       385 ~~~~~~~~l~~~~~f~i-~~~~~e~a~l~~~~---------~~~~-l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~  453 (681)
T PRK08324        385 EAVGRYEPLSEQEAFDI-EYWSLEQAKLQRMP---------KPKP-LAGKVALVTGAAGGIGKATAKRLAAEGACVVLAD  453 (681)
T ss_pred             hhcCCccCCChhhhcce-eeehhhhhhhhcCC---------CCcC-CCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEe
Confidence            45678888888777777 66777776521100         1111 46899999986 9999999999999999999999


Q ss_pred             CCcHHHHHHHHhcCC-----cEEEcCCChhHHHHh-------hCCccEEEEcCCC
Q 018382          212 SSDKKRVEAMEHLGA-----DQYLVSSDATRMQEA-------ADSLDYIIDTVPA  254 (357)
Q Consensus       212 ~~~~~~~~~~~~~g~-----~~vv~~~~~~~~~~~-------~~~~d~v~d~~g~  254 (357)
                      ++.++.+.+.+.++.     ....|..+.+.+++.       .+++|++|+++|.
T Consensus       454 r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iDvvI~~AG~  508 (681)
T PRK08324        454 LDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGVDIVVSNAGI  508 (681)
T ss_pred             CCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence            998877666554543     123455555433322       2379999999984

>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed

Probab=97.93  E-value=7.7e-05  Score=65.90  Aligned_cols=130  Identities=20%  Similarity=0.287  Sum_probs=81.0

Q ss_pred             cceEEEeeCcceEECCCCCCccccccccchhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCC
Q 018382          135 FAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSS  213 (357)
Q Consensus       135 ~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~  213 (357)
                      |.+|.. +...++++++++++..+. .+.... ....+...  ..++++||-+|+|. |..++.+++ .|+ +|++++.+
T Consensus        79 ~~~~~~-~~~~~i~i~p~~afgtg~-h~tt~~-~l~~l~~~--~~~~~~VLDiGcGs-G~l~i~~~~-~g~~~v~giDis  151 (250)
T PRK00517         79 WEDPPD-PDEINIELDPGMAFGTGT-HPTTRL-CLEALEKL--VLPGKTVLDVGCGS-GILAIAAAK-LGAKKVLAVDID  151 (250)
T ss_pred             CcCCCC-CCeEEEEECCCCccCCCC-CHHHHH-HHHHHHhh--cCCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEEECC
Confidence            334433 567789999998888765 221111 22222222  36889999999986 877776555 566 69999999


Q ss_pred             cHHHHHHHHhcCCcEE---EcCCChhHHHHhhCCccEEEEcCCCC---CChHHHHhccccCCeEEEEccC
Q 018382          214 DKKRVEAMEHLGADQY---LVSSDATRMQEAADSLDYIIDTVPAN---HPLEPYLSLLKLDGKLILTGVI  277 (357)
Q Consensus       214 ~~~~~~~~~~~g~~~v---v~~~~~~~~~~~~~~~d~v~d~~g~~---~~~~~~~~~l~~~G~~v~~g~~  277 (357)
                      +...+.+++.+....+   +....      ....+|+|+......   ..+..+.+.|+++|.++..+..
T Consensus       152 ~~~l~~A~~n~~~~~~~~~~~~~~------~~~~fD~Vvani~~~~~~~l~~~~~~~LkpgG~lilsgi~  215 (250)
T PRK00517        152 PQAVEAARENAELNGVELNVYLPQ------GDLKADVIVANILANPLLELAPDLARLLKPGGRLILSGIL  215 (250)
T ss_pred             HHHHHHHHHHHHHcCCCceEEEcc------CCCCcCEEEEcCcHHHHHHHHHHHHHhcCCCcEEEEEECc
Confidence            8887776664321111   11000      011599998655433   1345678889999999987654

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=97.91  E-value=7.4e-05  Score=63.98  Aligned_cols=76  Identities=16%  Similarity=0.270  Sum_probs=61.5

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCC----cEEEcCCChhH----HHHhh---CCccE
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGA----DQYLVSSDATR----MQEAA---DSLDY  247 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~----~~vv~~~~~~~----~~~~~---~~~d~  247 (357)
                      +++.++|+|+ +++|.+.++.+...|++|+.+.|..++++++..+++.    ...+|..+.+.    ++.+.   +.+|+
T Consensus         5 ~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iDi   84 (246)
T COG4221           5 KGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRIDI   84 (246)
T ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCcccE
Confidence            4578899998 9999999999999999999999999999999988993    34566666543    33232   37999


Q ss_pred             EEEcCCCC
Q 018382          248 IIDTVPAN  255 (357)
Q Consensus       248 v~d~~g~~  255 (357)
                      .++.+|-.
T Consensus        85 LvNNAGl~   92 (246)
T COG4221          85 LVNNAGLA   92 (246)
T ss_pred             EEecCCCC
Confidence            99998874

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=97.74  E-value=0.00025  Score=62.28  Aligned_cols=77  Identities=14%  Similarity=0.179  Sum_probs=59.9

Q ss_pred             CCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCc-------EEEcCCChhHHHHhh----C---
Q 018382          179 QSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGAD-------QYLVSSDATRMQEAA----D---  243 (357)
Q Consensus       179 ~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~-------~vv~~~~~~~~~~~~----~---  243 (357)
                      ..+.++||+|+ +++|...+..+...|.+|+.++|++++++.+.+++.-.       ..+|..+++.++.+.    .   
T Consensus         4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~~   83 (265)
T COG0300           4 MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERGG   83 (265)
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcCC
Confidence            46789999998 99999999999999999999999999988877656522       234666655444332    2   


Q ss_pred             CccEEEEcCCCC
Q 018382          244 SLDYIIDTVPAN  255 (357)
Q Consensus       244 ~~d~v~d~~g~~  255 (357)
                      .+|+.++++|-.
T Consensus        84 ~IdvLVNNAG~g   95 (265)
T COG0300          84 PIDVLVNNAGFG   95 (265)
T ss_pred             cccEEEECCCcC
Confidence            699999999875

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.72  E-value=0.00035  Score=58.33  Aligned_cols=105  Identities=16%  Similarity=0.133  Sum_probs=73.3

Q ss_pred             CCCeEEEEec--ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCC-cEEEcCCChhHHHHh--------hCCccEE
Q 018382          180 SGLRGGILGL--GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGA-DQYLVSSDATRMQEA--------ADSLDYI  248 (357)
Q Consensus       180 ~~~~VlI~G~--g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~-~~vv~~~~~~~~~~~--------~~~~d~v  248 (357)
                      ..+.|||+|+  |++|.+++.-....|+.|++++|+.++...+..++|. ..-+|..+++.+...        .+..|+.
T Consensus         6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~L   85 (289)
T KOG1209|consen    6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDLL   85 (289)
T ss_pred             CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEEE
Confidence            4577999975  9999999988888999999999999999888866894 334566665433322        1368999


Q ss_pred             EEcCCCC----------------------C--ChHHH--HhccccCCeEEEEccCCCCcccc
Q 018382          249 IDTVPAN----------------------H--PLEPY--LSLLKLDGKLILTGVINTPMQFL  284 (357)
Q Consensus       249 ~d~~g~~----------------------~--~~~~~--~~~l~~~G~~v~~g~~~~~~~~~  284 (357)
                      ++.+|-.                      .  .+..+  -.+.+..|++|.+|....-.+++
T Consensus        86 ~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~vpfp  147 (289)
T KOG1209|consen   86 YNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGVVPFP  147 (289)
T ss_pred             EcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEEeccc
Confidence            9877653                      0  11111  22466789999988765444433

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=97.66  E-value=0.0004  Score=64.34  Aligned_cols=98  Identities=19%  Similarity=0.250  Sum_probs=76.5

Q ss_pred             CeEEEEecChHHHHHHHHHHHcC-CeEEEEeCCcHHHHHHHHhcC---CcEEEcCCChhHHHHhhCCccEEEEcCCCCCC
Q 018382          182 LRGGILGLGGVGHMGVLIAKAMG-HHVTVISSSDKKRVEAMEHLG---ADQYLVSSDATRMQEAADSLDYIIDTVPANHP  257 (357)
Q Consensus       182 ~~VlI~G~g~~G~~ai~la~~~g-~~V~~~~~~~~~~~~~~~~~g---~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~  257 (357)
                      .+|||+|+|.+|..+++.+...+ .+|++++++.++...+....+   ....+|..+.+.+.++..++|+||++.+....
T Consensus         2 ~~ilviGaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d~VIn~~p~~~~   81 (389)
T COG1748           2 MKILVIGAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIKDFDLVINAAPPFVD   81 (389)
T ss_pred             CcEEEECCchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHhcCCEEEEeCCchhh
Confidence            57999999999999999988888 699999999998888877332   24467887877777888888999999998744


Q ss_pred             hHHHHhccccCCeEEEEccCCC
Q 018382          258 LEPYLSLLKLDGKLILTGVINT  279 (357)
Q Consensus       258 ~~~~~~~l~~~G~~v~~g~~~~  279 (357)
                      ......+++.+=.++++.....
T Consensus        82 ~~i~ka~i~~gv~yvDts~~~~  103 (389)
T COG1748          82 LTILKACIKTGVDYVDTSYYEE  103 (389)
T ss_pred             HHHHHHHHHhCCCEEEcccCCc
Confidence            5445566666667877765443

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=97.63  E-value=0.00026  Score=58.77  Aligned_cols=75  Identities=16%  Similarity=0.142  Sum_probs=59.4

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcC--CcEEEcCCChh----HHHHhhC---CccEEE
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLG--ADQYLVSSDAT----RMQEAAD---SLDYII  249 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g--~~~vv~~~~~~----~~~~~~~---~~d~v~  249 (357)
                      -|.+|||+|+ +++|++.++-...+|-+|++..|+++++++++....  ...+.|..|.+    .++++.+   ..++++
T Consensus         4 tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNvli   83 (245)
T COG3967           4 TGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYPNLNVLI   83 (245)
T ss_pred             cCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCCchheee
Confidence            4679999965 999999999999999999999999999999888555  34556666644    4444444   589999


Q ss_pred             EcCCC
Q 018382          250 DTVPA  254 (357)
Q Consensus       250 d~~g~  254 (357)
                      +++|-
T Consensus        84 NNAGI   88 (245)
T COG3967          84 NNAGI   88 (245)
T ss_pred             ecccc
Confidence            98875

>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=97.62  E-value=0.00062  Score=57.29  Aligned_cols=103  Identities=26%  Similarity=0.329  Sum_probs=70.8

Q ss_pred             hhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHH---HHhcCCcEE-EcCCChhHHHHhhCCcc
Q 018382          171 PLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEA---MEHLGADQY-LVSSDATRMQEAADSLD  246 (357)
Q Consensus       171 ~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~---~~~~g~~~v-v~~~~~~~~~~~~~~~d  246 (357)
                      ++..+.. +++++||=+|+|. |+.++-+++..+ +|+.+.+.++=.+.+   .+.+|...+ +...|...--....+||
T Consensus        64 m~~~L~~-~~g~~VLEIGtGs-GY~aAvla~l~~-~V~siEr~~~L~~~A~~~L~~lg~~nV~v~~gDG~~G~~~~aPyD  140 (209)
T COG2518          64 MLQLLEL-KPGDRVLEIGTGS-GYQAAVLARLVG-RVVSIERIEELAEQARRNLETLGYENVTVRHGDGSKGWPEEAPYD  140 (209)
T ss_pred             HHHHhCC-CCCCeEEEECCCc-hHHHHHHHHHhC-eEEEEEEcHHHHHHHHHHHHHcCCCceEEEECCcccCCCCCCCcC
Confidence            4444444 9999999999863 899999999888 999999887633333   233786433 33333211011124799


Q ss_pred             EEEEcCCCCCChHHHHhccccCCeEEEEcc
Q 018382          247 YIIDTVPANHPLEPYLSLLKLDGKLILTGV  276 (357)
Q Consensus       247 ~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~  276 (357)
                      .++-+.+....-..+++.|+++|+++..-.
T Consensus       141 ~I~Vtaaa~~vP~~Ll~QL~~gGrlv~PvG  170 (209)
T COG2518         141 RIIVTAAAPEVPEALLDQLKPGGRLVIPVG  170 (209)
T ss_pred             EEEEeeccCCCCHHHHHhcccCCEEEEEEc
Confidence            998888877566789999999999887543

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=97.60  E-value=0.0003  Score=67.08  Aligned_cols=161  Identities=19%  Similarity=0.200  Sum_probs=98.9

Q ss_pred             ccCccccEEEEEeCCCCCCCCCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcc
Q 018382           66 VPGHEVVGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKF  145 (357)
Q Consensus        66 ~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~  145 (357)
                      .-|+|+++.+.+|+++.+..-+|+.=+       ||-|.    ...+.|...+..       |...++.|++.+.+    
T Consensus        91 ~~g~ea~~hl~~V~~GldS~V~GE~qI-------lgQvk----~a~~~a~~~g~~-------g~~l~~lf~~a~~~----  148 (423)
T PRK00045         91 HEGEEAVRHLFRVASGLDSMVLGEPQI-------LGQVK----DAYALAQEAGTV-------GTILNRLFQKAFSV----  148 (423)
T ss_pred             cCCHHHHHHHHHHHhhhhhhhcCChHH-------HHHHH----HHHHHHHHcCCc-------hHHHHHHHHHHHHH----
Confidence            359999999999999988755555321       22222    222333322211       11234555554433    


Q ss_pred             eEECCCCCCccccccccchhhhhhhhhhccCC---CCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHH
Q 018382          146 VVKIPDGMALEQAAPLLCAGVTVFSPLSHFGL---KQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAM  221 (357)
Q Consensus       146 ~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~---~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~  221 (357)
                          |+.+..+.+. ...+.+.++.++..+..   -.++++|+|+|+|.+|.++++.++..|+ +|+++.++.++...+.
T Consensus       149 ----~k~v~~~t~i-~~~~~Sv~~~Av~~a~~~~~~~~~~~vlViGaG~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la  223 (423)
T PRK00045        149 ----AKRVRTETGI-GAGAVSVASAAVELAKQIFGDLSGKKVLVIGAGEMGELVAKHLAEKGVRKITVANRTLERAEELA  223 (423)
T ss_pred             ----HhhHhhhcCC-CCCCcCHHHHHHHHHHHhhCCccCCEEEEECchHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHH
Confidence                3333322221 12233444555544332   1578999999999999999999999998 8999999988877666


Q ss_pred             HhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCCC
Q 018382          222 EHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHP  257 (357)
Q Consensus       222 ~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~  257 (357)
                      +.+|.+ +++.   +...+...++|+||+|++....
T Consensus       224 ~~~g~~-~~~~---~~~~~~l~~aDvVI~aT~s~~~  255 (423)
T PRK00045        224 EEFGGE-AIPL---DELPEALAEADIVISSTGAPHP  255 (423)
T ss_pred             HHcCCc-EeeH---HHHHHHhccCCEEEECCCCCCc
Confidence            658864 3332   2233344589999999988643

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.56  E-value=0.00089  Score=58.38  Aligned_cols=98  Identities=21%  Similarity=0.300  Sum_probs=67.0

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc---CCcEE--EcCCChhHHHHh-------hCCcc
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL---GADQY--LVSSDATRMQEA-------ADSLD  246 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~---g~~~v--v~~~~~~~~~~~-------~~~~d  246 (357)
                      ++++|||+|+ |.+|..+++.+...|++|+++++++++.+.+.+..   +..+.  .|..+++.++++       .+++|
T Consensus         4 ~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   83 (238)
T PRK05786          4 KGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAID   83 (238)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence            4689999987 99999999999999999999999988776553323   22222  344444433322       23689


Q ss_pred             EEEEcCCCCC-----------------------ChHHHHhccccCCeEEEEccC
Q 018382          247 YIIDTVPANH-----------------------PLEPYLSLLKLDGKLILTGVI  277 (357)
Q Consensus       247 ~v~d~~g~~~-----------------------~~~~~~~~l~~~G~~v~~g~~  277 (357)
                      .++.+++...                       .++.....++++|+++.++..
T Consensus        84 ~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~  137 (238)
T PRK05786         84 GLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSM  137 (238)
T ss_pred             EEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecc
Confidence            9999887531                       133444556678888888764

>PRK12742 oxidoreductase; Provisional

Probab=97.53  E-value=0.0013  Score=57.36  Aligned_cols=75  Identities=20%  Similarity=0.197  Sum_probs=52.5

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeC-CcHHHHHHHHhcCCcEE-EcCCChhHHHHhh---CCccEEEEcCC
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISS-SDKKRVEAMEHLGADQY-LVSSDATRMQEAA---DSLDYIIDTVP  253 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~-~~~~~~~~~~~~g~~~v-v~~~~~~~~~~~~---~~~d~v~d~~g  253 (357)
                      +++++||+|+ |++|.++++.+...|++|+++.+ ++++.+.+.++++...+ .|..+.+.+.+..   +++|++++++|
T Consensus         5 ~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~ag   84 (237)
T PRK12742          5 TGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVRKSGALDILVVNAG   84 (237)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHHHhCCCcEEEECCC
Confidence            4789999987 99999999999999999988765 44555555444665433 4555544333322   36899999987


Q ss_pred             C
Q 018382          254 A  254 (357)
Q Consensus       254 ~  254 (357)
                      .
T Consensus        85 ~   85 (237)
T PRK12742         85 I   85 (237)
T ss_pred             C
Confidence            5

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=97.49  E-value=0.00066  Score=56.64  Aligned_cols=121  Identities=19%  Similarity=0.234  Sum_probs=79.5

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCC--
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANH--  256 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~--  256 (357)
                      -.|++|.|+|.|.+|...++.++.+|++|++.+++........+ .+...    .   .++++....|+|+.+.....  
T Consensus        34 l~g~tvgIiG~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~-~~~~~----~---~l~ell~~aDiv~~~~plt~~T  105 (178)
T PF02826_consen   34 LRGKTVGIIGYGRIGRAVARRLKAFGMRVIGYDRSPKPEEGADE-FGVEY----V---SLDELLAQADIVSLHLPLTPET  105 (178)
T ss_dssp             STTSEEEEESTSHHHHHHHHHHHHTT-EEEEEESSCHHHHHHHH-TTEEE----S---SHHHHHHH-SEEEE-SSSSTTT
T ss_pred             cCCCEEEEEEEcCCcCeEeeeeecCCceeEEecccCChhhhccc-cccee----e---ehhhhcchhhhhhhhhcccccc
Confidence            46899999999999999999999999999999999776553334 55421    1   23445556999998776421  


Q ss_pred             --C-hHHHHhccccCCeEEEEccCCCCcccchHHHhhccceEEEEeecCHHHHHHHHHHHHhcCCCccE-EEeecccHH
Q 018382          257 --P-LEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMI-EVIKMDYVN  331 (357)
Q Consensus       257 --~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~~i-~~~~~~~~~  331 (357)
                        . -...++.|+++..+|.++=..                        .-+-+.+.+.+++|.+..-. ++|.-|.++
T Consensus       106 ~~li~~~~l~~mk~ga~lvN~aRG~------------------------~vde~aL~~aL~~g~i~ga~lDV~~~EP~~  160 (178)
T PF02826_consen  106 RGLINAEFLAKMKPGAVLVNVARGE------------------------LVDEDALLDALESGKIAGAALDVFEPEPLP  160 (178)
T ss_dssp             TTSBSHHHHHTSTTTEEEEESSSGG------------------------GB-HHHHHHHHHTTSEEEEEESS-SSSSSS
T ss_pred             ceeeeeeeeeccccceEEEeccchh------------------------hhhhhHHHHHHhhccCceEEEECCCCCCCC
Confidence              2 245788899888888763211                        11445667777777776533 555555443

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=97.47  E-value=0.0024  Score=51.63  Aligned_cols=97  Identities=20%  Similarity=0.229  Sum_probs=67.1

Q ss_pred             cCCCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCC
Q 018382          175 FGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPA  254 (357)
Q Consensus       175 ~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~  254 (357)
                      ....-.|++++|.|-|-+|...++.++.+|++|+++...+-+.-++.. -|....       .+++.....|++|.++|.
T Consensus        17 t~~~l~Gk~vvV~GYG~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~~-dGf~v~-------~~~~a~~~adi~vtaTG~   88 (162)
T PF00670_consen   17 TNLMLAGKRVVVIGYGKVGKGIARALRGLGARVTVTEIDPIRALQAAM-DGFEVM-------TLEEALRDADIFVTATGN   88 (162)
T ss_dssp             H-S--TTSEEEEE--SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHHH-TT-EEE--------HHHHTTT-SEEEE-SSS
T ss_pred             CceeeCCCEEEEeCCCcccHHHHHHHhhCCCEEEEEECChHHHHHhhh-cCcEec-------CHHHHHhhCCEEEECCCC
Confidence            344468999999999999999999999999999999998777665555 565421       245566689999999999


Q ss_pred             CCCh-HHHHhccccCCeEEEEccCCC
Q 018382          255 NHPL-EPYLSLLKLDGKLILTGVINT  279 (357)
Q Consensus       255 ~~~~-~~~~~~l~~~G~~v~~g~~~~  279 (357)
                      ...+ ..-++.|+++-.+..+|....
T Consensus        89 ~~vi~~e~~~~mkdgail~n~Gh~d~  114 (162)
T PF00670_consen   89 KDVITGEHFRQMKDGAILANAGHFDV  114 (162)
T ss_dssp             SSSB-HHHHHHS-TTEEEEESSSSTT
T ss_pred             ccccCHHHHHHhcCCeEEeccCcCce
Confidence            7543 577889999988888876543

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]

Probab=97.46  E-value=0.0011  Score=58.71  Aligned_cols=98  Identities=19%  Similarity=0.226  Sum_probs=78.7

Q ss_pred             CeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcC---CC---C
Q 018382          182 LRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTV---PA---N  255 (357)
Q Consensus       182 ~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~---g~---~  255 (357)
                      .+|.|+|+|.+|.-++.+|..+|++|++.+.+.+|+..+...|+-..-.-++.+..+++.....|++|.++   |.   .
T Consensus       169 ~kv~iiGGGvvgtnaAkiA~glgA~Vtild~n~~rl~~ldd~f~~rv~~~~st~~~iee~v~~aDlvIgaVLIpgakaPk  248 (371)
T COG0686         169 AKVVVLGGGVVGTNAAKIAIGLGADVTILDLNIDRLRQLDDLFGGRVHTLYSTPSNIEEAVKKADLVIGAVLIPGAKAPK  248 (371)
T ss_pred             ccEEEECCccccchHHHHHhccCCeeEEEecCHHHHhhhhHhhCceeEEEEcCHHHHHHHhhhccEEEEEEEecCCCCce
Confidence            45888899999999999999999999999999999999988788663344566677777777899998754   22   1


Q ss_pred             CChHHHHhccccCCeEEEEccCCC
Q 018382          256 HPLEPYLSLLKLDGKLILTGVINT  279 (357)
Q Consensus       256 ~~~~~~~~~l~~~G~~v~~g~~~~  279 (357)
                      -..++..+.|+|++.++++....+
T Consensus       249 Lvt~e~vk~MkpGsVivDVAiDqG  272 (371)
T COG0686         249 LVTREMVKQMKPGSVIVDVAIDQG  272 (371)
T ss_pred             ehhHHHHHhcCCCcEEEEEEEcCC
Confidence            145677899999999999865443

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=97.42  E-value=0.0013  Score=54.93  Aligned_cols=91  Identities=19%  Similarity=0.165  Sum_probs=67.7

Q ss_pred             EEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEE-EcCCChhHHHHhhCCccEEEEcCCCCC----C
Q 018382          184 GGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQY-LVSSDATRMQEAADSLDYIIDTVPANH----P  257 (357)
Q Consensus       184 VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~v-v~~~~~~~~~~~~~~~d~v~d~~g~~~----~  257 (357)
                      |+|+|+ |.+|..+++.+...|.+|++++|++++.+.   ..+.+.+ .|..+.+.+.+...++|+||.+++...    .
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~---~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~~~~~~~~   77 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED---SPGVEIIQGDLFDPDSVKAALKGADAVIHAAGPPPKDVDA   77 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH---CTTEEEEESCTTCHHHHHHHHTTSSEEEECCHSTTTHHHH
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc---ccccccceeeehhhhhhhhhhhhcchhhhhhhhhcccccc
Confidence            689997 999999999999999999999999887766   2454433 356667777777779999999998532    2


Q ss_pred             hHHHHhccccCC--eEEEEccC
Q 018382          258 LEPYLSLLKLDG--KLILTGVI  277 (357)
Q Consensus       258 ~~~~~~~l~~~G--~~v~~g~~  277 (357)
                      ....++.++..|  +++.++..
T Consensus        78 ~~~~~~a~~~~~~~~~v~~s~~   99 (183)
T PF13460_consen   78 AKNIIEAAKKAGVKRVVYLSSA   99 (183)
T ss_dssp             HHHHHHHHHHTTSSEEEEEEET
T ss_pred             cccccccccccccccceeeecc
Confidence            444555555544  67766554

...

>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional

Probab=97.35  E-value=0.0022  Score=54.50  Aligned_cols=95  Identities=14%  Similarity=0.190  Sum_probs=65.8

Q ss_pred             CCCCCeEEEEecChHHHHHHHHHHHcC--CeEEEEeCCcHHHHHHHH---hcC-CcE--EEcCCChhHHHHhhCCccEEE
Q 018382          178 KQSGLRGGILGLGGVGHMGVLIAKAMG--HHVTVISSSDKKRVEAME---HLG-ADQ--YLVSSDATRMQEAADSLDYII  249 (357)
Q Consensus       178 ~~~~~~VlI~G~g~~G~~ai~la~~~g--~~V~~~~~~~~~~~~~~~---~~g-~~~--vv~~~~~~~~~~~~~~~d~v~  249 (357)
                      +.++++||.+|+|. |..++.+++..+  .+|++++.+++..+.+++   .+| .+.  ++..+..+.+......+|.||
T Consensus        38 ~~~~~~vlDlG~Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~~d~~~~l~~~~~~~D~V~  116 (198)
T PRK00377         38 LRKGDMILDIGCGT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIKGEAPEILFTINEKFDRIF  116 (198)
T ss_pred             CCCcCEEEEeCCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEEechhhhHhhcCCCCCEEE
Confidence            38999999999877 888888888764  489999999887765543   255 222  222222333444446899999


Q ss_pred             EcCCCC---CChHHHHhccccCCeEEE
Q 018382          250 DTVPAN---HPLEPYLSLLKLDGKLIL  273 (357)
Q Consensus       250 d~~g~~---~~~~~~~~~l~~~G~~v~  273 (357)
                      ...+..   ..+..+.+.|+++|+++.
T Consensus       117 ~~~~~~~~~~~l~~~~~~LkpgG~lv~  143 (198)
T PRK00377        117 IGGGSEKLKEIISASWEIIKKGGRIVI  143 (198)
T ss_pred             ECCCcccHHHHHHHHHHHcCCCcEEEE
Confidence            855432   245677888999999875

>PRK06182 short chain dehydrogenase; Validated

Probab=97.33  E-value=0.0029  Score=56.51  Aligned_cols=75  Identities=17%  Similarity=0.194  Sum_probs=55.7

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcE-EEcCCChhHHHHhh-------CCccEEEE
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQ-YLVSSDATRMQEAA-------DSLDYIID  250 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~-------~~~d~v~d  250 (357)
                      ++++++|+|+ |++|.++++.+...|++|+++++++++.+.+.+ .+... ..|..+.+.++++.       +++|++++
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~-~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~   80 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLAS-LGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVN   80 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh-CCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence            3578999987 999999999998899999999999887765554 45432 34666655443332       37999999


Q ss_pred             cCCCC
Q 018382          251 TVPAN  255 (357)
Q Consensus       251 ~~g~~  255 (357)
                      ++|..
T Consensus        81 ~ag~~   85 (273)
T PRK06182         81 NAGYG   85 (273)
T ss_pred             CCCcC
Confidence            98753

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.30  E-value=0.002  Score=57.78  Aligned_cols=110  Identities=24%  Similarity=0.256  Sum_probs=70.7

Q ss_pred             hhhhhhhhc-cCCCCCCCeEEEEecChHHHHHHHHHHHcC-CeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhC
Q 018382          166 VTVFSPLSH-FGLKQSGLRGGILGLGGVGHMGVLIAKAMG-HHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAAD  243 (357)
Q Consensus       166 ~ta~~~l~~-~~~~~~~~~VlI~G~g~~G~~ai~la~~~g-~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~  243 (357)
                      .....++.. ...-..+++|+|+|+|++|.+++..+...| .+|+++.|+.++.+.+.+.++....+.. .. ...+...
T Consensus       107 ~G~~~~l~~~~~~~~~~k~vlVlGaGg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~-~~-~~~~~~~  184 (278)
T PRK00258        107 IGFVRALEERLGVDLKGKRILILGAGGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAEL-DL-ELQEELA  184 (278)
T ss_pred             HHHHHHHHhccCCCCCCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceee-cc-cchhccc
Confidence            334444543 232246788999999999999999999999 5999999999888777765653210111 00 1112335


Q ss_pred             CccEEEEcCCCCCC-----hHHHHhccccCCeEEEEccC
Q 018382          244 SLDYIIDTVPANHP-----LEPYLSLLKLDGKLILTGVI  277 (357)
Q Consensus       244 ~~d~v~d~~g~~~~-----~~~~~~~l~~~G~~v~~g~~  277 (357)
                      .+|+|++++.....     .......++++..++++-..
T Consensus       185 ~~DivInaTp~g~~~~~~~~~~~~~~l~~~~~v~DivY~  223 (278)
T PRK00258        185 DFDLIINATSAGMSGELPLPPLPLSLLRPGTIVYDMIYG  223 (278)
T ss_pred             cCCEEEECCcCCCCCCCCCCCCCHHHcCCCCEEEEeecC
Confidence            79999999876521     01233567777777776443

>PRK05993 short chain dehydrogenase; Provisional

Probab=97.30  E-value=0.0038  Score=55.97  Aligned_cols=74  Identities=14%  Similarity=0.145  Sum_probs=55.2

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEE-EcCCChhHHHH----hh----CCccEEE
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQY-LVSSDATRMQE----AA----DSLDYII  249 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~v-v~~~~~~~~~~----~~----~~~d~v~  249 (357)
                      .++++||+|+ |++|.++++.+...|++|+++++++++.+.+.+ .+...+ .|..+.+.+++    +.    +.+|+++
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~-~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li   81 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEA-EGLEAFQLDYAEPESIAALVAQVLELSGGRLDALF   81 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-CCceEEEccCCCHHHHHHHHHHHHHHcCCCccEEE
Confidence            4578999987 999999999998889999999999888777665 454332 46666543322    21    3689999


Q ss_pred             EcCCC
Q 018382          250 DTVPA  254 (357)
Q Consensus       250 d~~g~  254 (357)
                      +++|.
T Consensus        82 ~~Ag~   86 (277)
T PRK05993         82 NNGAY   86 (277)
T ss_pred             ECCCc
Confidence            98864

>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A

Probab=97.28  E-value=0.0015  Score=49.70  Aligned_cols=94  Identities=27%  Similarity=0.292  Sum_probs=63.1

Q ss_pred             CCCeEEEEecChHHHHHHHHHH-HcCCeEEEEeCCcHHHHHHHHhc---C--CcEEEcCCChhHHHHhhCCccEEEEcC-
Q 018382          180 SGLRGGILGLGGVGHMGVLIAK-AMGHHVTVISSSDKKRVEAMEHL---G--ADQYLVSSDATRMQEAADSLDYIIDTV-  252 (357)
Q Consensus       180 ~~~~VlI~G~g~~G~~ai~la~-~~g~~V~~~~~~~~~~~~~~~~~---g--~~~vv~~~~~~~~~~~~~~~d~v~d~~-  252 (357)
                      |+.+||-+|+|. |..++.+++ ..+++|++++.+++..+.+++..   +  ..-.+-..+.........+||+|+... 
T Consensus         1 p~~~vLDlGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~   79 (112)
T PF12847_consen    1 PGGRVLDLGCGT-GRLSIALARLFPGARVVGVDISPEMLEIARERAAEEGLSDRITFVQGDAEFDPDFLEPFDLVICSGF   79 (112)
T ss_dssp             TTCEEEEETTTT-SHHHHHHHHHHTTSEEEEEESSHHHHHHHHHHHHHTTTTTTEEEEESCCHGGTTTSSCEEEEEECSG
T ss_pred             CCCEEEEEcCcC-CHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEECccccCcccCCCCCEEEECCC
Confidence            678999998864 777777777 56889999999999888777765   2  121122222212223334799999866 


Q ss_pred             CCC---C------ChHHHHhccccCCeEEEE
Q 018382          253 PAN---H------PLEPYLSLLKLDGKLILT  274 (357)
Q Consensus       253 g~~---~------~~~~~~~~l~~~G~~v~~  274 (357)
                      ...   .      .++.+.+.|+|+|+++.-
T Consensus        80 ~~~~~~~~~~~~~~l~~~~~~L~pgG~lvi~  110 (112)
T PF12847_consen   80 TLHFLLPLDERRRVLERIRRLLKPGGRLVIN  110 (112)
T ss_dssp             SGGGCCHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             ccccccchhHHHHHHHHHHHhcCCCcEEEEE
Confidence            221   1      156788899999998753

...

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=97.28  E-value=0.0021  Score=62.64  Aligned_cols=78  Identities=15%  Similarity=0.136  Sum_probs=59.0

Q ss_pred             CCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc--------CC------c-EEEcCCChhHHHHh
Q 018382          178 KQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL--------GA------D-QYLVSSDATRMQEA  241 (357)
Q Consensus       178 ~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~--------g~------~-~vv~~~~~~~~~~~  241 (357)
                      .+.|+++||+|+ |.+|..+++.+...|++|++++++.++...+.+.+        |.      . ...|..+.+.++..
T Consensus        77 ~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~a  156 (576)
T PLN03209         77 TKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPA  156 (576)
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHH
Confidence            368899999987 99999999999888999999999988765543321        21      1 12456666666666


Q ss_pred             hCCccEEEEcCCCC
Q 018382          242 ADSLDYIIDTVPAN  255 (357)
Q Consensus       242 ~~~~d~v~d~~g~~  255 (357)
                      .+++|+||.++|..
T Consensus       157 LggiDiVVn~AG~~  170 (576)
T PLN03209        157 LGNASVVICCIGAS  170 (576)
T ss_pred             hcCCCEEEEccccc
Confidence            67899999998764

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=97.27  E-value=0.003  Score=51.95  Aligned_cols=98  Identities=19%  Similarity=0.269  Sum_probs=68.0

Q ss_pred             cccccchhhhhhhhhhccCCCCCCCeEEEEecCh-HHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChh
Q 018382          158 AAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGG-VGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDAT  236 (357)
Q Consensus       158 aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~-~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~  236 (357)
                      ....|+...++...++....--.+++|+|+|+|. +|..++..++..|++|+++.++.+                     
T Consensus        21 ~~~~p~~~~a~v~l~~~~~~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~~---------------------   79 (168)
T cd01080          21 PGFIPCTPAGILELLKRYGIDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKTK---------------------   79 (168)
T ss_pred             CCccCChHHHHHHHHHHcCCCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCch---------------------
Confidence            4556666555555555554336789999999986 599899999999999888887531                     


Q ss_pred             HHHHhhCCccEEEEcCCCCCChHHHHhccccCCeEEEEccCC
Q 018382          237 RMQEAADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVIN  278 (357)
Q Consensus       237 ~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~  278 (357)
                      .+.+....+|+||.+++....+.  .+.++++-.+++++.+.
T Consensus        80 ~l~~~l~~aDiVIsat~~~~ii~--~~~~~~~~viIDla~pr  119 (168)
T cd01080          80 NLKEHTKQADIVIVAVGKPGLVK--GDMVKPGAVVIDVGINR  119 (168)
T ss_pred             hHHHHHhhCCEEEEcCCCCceec--HHHccCCeEEEEccCCC
Confidence            12234457899999999874332  23566666677777654

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.26  E-value=0.0028  Score=56.26  Aligned_cols=104  Identities=17%  Similarity=0.231  Sum_probs=69.4

Q ss_pred             CCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHH----HHhcC-Cc--EE--EcCCChhHHH----Hh---
Q 018382          179 QSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEA----MEHLG-AD--QY--LVSSDATRMQ----EA---  241 (357)
Q Consensus       179 ~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~----~~~~g-~~--~v--v~~~~~~~~~----~~---  241 (357)
                      -.++.|+|+|| +++|.+.+.-.-..|++++.+++...+.+.+    ++ .+ .+  ++  .|..+.+.++    ++   
T Consensus        10 ~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~-~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~   88 (282)
T KOG1205|consen   10 LAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRK-LGSLEKVLVLQLDVSDEESVKKFVEWAIRH   88 (282)
T ss_pred             hCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHH-hCCcCccEEEeCccCCHHHHHHHHHHHHHh
Confidence            36789999998 9999998888888899988888877766555    33 33 23  11  2444544333    22   


Q ss_pred             hCCccEEEEcCCCC-------------------------CChHHHHhccccC--CeEEEEccCCCCccc
Q 018382          242 ADSLDYIIDTVPAN-------------------------HPLEPYLSLLKLD--GKLILTGVINTPMQF  283 (357)
Q Consensus       242 ~~~~d~v~d~~g~~-------------------------~~~~~~~~~l~~~--G~~v~~g~~~~~~~~  283 (357)
                      .+++|+.++.+|-.                         ...+.++..|++.  |++|.++...+....
T Consensus        89 fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~  157 (282)
T KOG1205|consen   89 FGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPL  157 (282)
T ss_pred             cCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCC
Confidence            24899999988754                         2334455566554  999998776654433

>PRK08265 short chain dehydrogenase; Provisional

Probab=97.25  E-value=0.004  Score=55.23  Aligned_cols=75  Identities=15%  Similarity=0.157  Sum_probs=55.3

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCc---EEEcCCChhHHHHh-------hCCccEE
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGAD---QYLVSSDATRMQEA-------ADSLDYI  248 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~~-------~~~~d~v  248 (357)
                      .++++||+|+ |++|.++++.+...|++|+++++++++.+.+.+.++..   ...|..+.+.++++       .+.+|++
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l   84 (261)
T PRK08265          5 AGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVDIL   84 (261)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            4678999987 99999999999889999999999887776666656532   12455555433332       1368999


Q ss_pred             EEcCCC
Q 018382          249 IDTVPA  254 (357)
Q Consensus       249 ~d~~g~  254 (357)
                      ++++|.
T Consensus        85 v~~ag~   90 (261)
T PRK08265         85 VNLACT   90 (261)
T ss_pred             EECCCC
Confidence            999874

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=97.24  E-value=0.0036  Score=56.27  Aligned_cols=76  Identities=21%  Similarity=0.313  Sum_probs=55.2

Q ss_pred             CCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCcE-EEcCCChhHHHHhhCCccEEEEcCCCC
Q 018382          180 SGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGADQ-YLVSSDATRMQEAADSLDYIIDTVPAN  255 (357)
Q Consensus       180 ~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~~~~d~v~d~~g~~  255 (357)
                      ++++|+|+|+|+.|.+++..+...|+ +|+++.|+.++.+.+.+.++... +......+.+......+|+|++|++..
T Consensus       124 ~~k~vlvlGaGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~~~~~~~~~~~~~DiVInaTp~g  201 (282)
T TIGR01809       124 AGFRGLVIGAGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLEGDSGGLAIEKAAEVLVSTVPAD  201 (282)
T ss_pred             CCceEEEEcCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceeccchhhhhhcccCCCEEEECCCCC
Confidence            57899999999999999999999998 89999999998888777665321 111111111223335799999998775

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=97.22  E-value=0.0059  Score=51.64  Aligned_cols=77  Identities=21%  Similarity=0.286  Sum_probs=56.2

Q ss_pred             CCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc----CCcE-EEcCCChhHHHHhhCCccEEEEcC
Q 018382          179 QSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL----GADQ-YLVSSDATRMQEAADSLDYIIDTV  252 (357)
Q Consensus       179 ~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~----g~~~-vv~~~~~~~~~~~~~~~d~v~d~~  252 (357)
                      -++.+++|+|+ |.+|..++..+...|.+|+++.++.++.+.+.+.+    +... ..+..+.+.+.+...+.|+||.++
T Consensus        26 l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~diVi~at  105 (194)
T cd01078          26 LKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIKGADVVFAAG  105 (194)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHhcCCEEEECC
Confidence            36789999986 99999988888888999999999888776665533    3221 233444444445556899999988


Q ss_pred             CCC
Q 018382          253 PAN  255 (357)
Q Consensus       253 g~~  255 (357)
                      ...
T Consensus       106 ~~g  108 (194)
T cd01078         106 AAG  108 (194)
T ss_pred             CCC
Confidence            776

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PRK05872 short chain dehydrogenase; Provisional

Probab=97.21  E-value=0.0024  Score=57.94  Aligned_cols=75  Identities=17%  Similarity=0.204  Sum_probs=56.9

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCC--cE-E--EcCCChhHHHHh-------hCCcc
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGA--DQ-Y--LVSSDATRMQEA-------ADSLD  246 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~--~~-v--v~~~~~~~~~~~-------~~~~d  246 (357)
                      +++++||+|+ |++|.++++.+...|++|+++++++++.+.+.+.++.  .. .  .|..+.+.+++.       .+++|
T Consensus         8 ~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id   87 (296)
T PRK05872          8 AGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGGID   87 (296)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            5789999987 9999999999999999999999998887776665652  11 1  466665443332       24799


Q ss_pred             EEEEcCCC
Q 018382          247 YIIDTVPA  254 (357)
Q Consensus       247 ~v~d~~g~  254 (357)
                      ++++++|.
T Consensus        88 ~vI~nAG~   95 (296)
T PRK05872         88 VVVANAGI   95 (296)
T ss_pred             EEEECCCc
Confidence            99999985

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=97.19  E-value=0.007  Score=54.65  Aligned_cols=100  Identities=14%  Similarity=0.172  Sum_probs=62.7

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCCe-EEEEeCCc---HHHHHHHHhcCC---c---EEEcCCChhHHHHhhCCccEE
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGHH-VTVISSSD---KKRVEAMEHLGA---D---QYLVSSDATRMQEAADSLDYI  248 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~-V~~~~~~~---~~~~~~~~~~g~---~---~vv~~~~~~~~~~~~~~~d~v  248 (357)
                      -.+++++|+|+|++|.+++..+...|++ |+++.|+.   ++.+.+.+++..   .   ...+..+.+.+.+....+|++
T Consensus       124 ~~~k~vlI~GAGGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~Dil  203 (289)
T PRK12548        124 VKGKKLTVIGAGGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIASSDIL  203 (289)
T ss_pred             cCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhccCCEE
Confidence            3578899999999999998888888995 99999986   555554443421   1   123443333344444578999


Q ss_pred             EEcCCCCC-----ChHH-HHhccccCCeEEEEccCC
Q 018382          249 IDTVPANH-----PLEP-YLSLLKLDGKLILTGVIN  278 (357)
Q Consensus       249 ~d~~g~~~-----~~~~-~~~~l~~~G~~v~~g~~~  278 (357)
                      ++|+.-..     .... ....++++..++++-..+
T Consensus       204 INaTp~Gm~~~~~~~~~~~~~~l~~~~~v~D~vY~P  239 (289)
T PRK12548        204 VNATLVGMKPNDGETNIKDTSVFRKDLVVADTVYNP  239 (289)
T ss_pred             EEeCCCCCCCCCCCCCCCcHHhcCCCCEEEEecCCC
Confidence            99885431     0001 124566666666664433

>PRK06139 short chain dehydrogenase; Provisional

Probab=97.16  E-value=0.0032  Score=58.05  Aligned_cols=75  Identities=20%  Similarity=0.262  Sum_probs=56.0

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCCcE---EEcCCChhHHHHhh-------CCc
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGADQ---YLVSSDATRMQEAA-------DSL  245 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~~~---vv~~~~~~~~~~~~-------~~~  245 (357)
                      +++++||+|+ |++|.++++.+...|++|+++++++++.+.+.+.   .|.+.   ..|..+.+.++++.       +++
T Consensus         6 ~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   85 (330)
T PRK06139          6 HGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGRI   85 (330)
T ss_pred             CCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence            5689999987 9999999999999999999999998876654432   45432   24666655444432       479


Q ss_pred             cEEEEcCCC
Q 018382          246 DYIIDTVPA  254 (357)
Q Consensus       246 d~v~d~~g~  254 (357)
                      |++|+++|.
T Consensus        86 D~lVnnAG~   94 (330)
T PRK06139         86 DVWVNNVGV   94 (330)
T ss_pred             CEEEECCCc
Confidence            999999884

>PRK05693 short chain dehydrogenase; Provisional

Probab=97.13  E-value=0.0032  Score=56.29  Aligned_cols=72  Identities=21%  Similarity=0.154  Sum_probs=54.1

Q ss_pred             CeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEE-EcCCChhHHHHhh-------CCccEEEEcC
Q 018382          182 LRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQY-LVSSDATRMQEAA-------DSLDYIIDTV  252 (357)
Q Consensus       182 ~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~v-v~~~~~~~~~~~~-------~~~d~v~d~~  252 (357)
                      +++||+|+ |++|.++++.+...|++|+++++++++.+.+.. .+...+ .|..+.+.++++.       +++|++++++
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~a   80 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAA-AGFTAVQLDVNDGAALARLAEELEAEHGGLDVLINNA   80 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-CCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence            47899987 999999999998899999999998877766655 454433 5666654443321       3799999999


Q ss_pred             CC
Q 018382          253 PA  254 (357)
Q Consensus       253 g~  254 (357)
                      |.
T Consensus        81 g~   82 (274)
T PRK05693         81 GY   82 (274)
T ss_pred             CC
Confidence            84

>PRK07109 short chain dehydrogenase; Provisional

Probab=97.12  E-value=0.0072  Score=55.84  Aligned_cols=75  Identities=17%  Similarity=0.186  Sum_probs=54.6

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCCcE---EEcCCChhHHHHh-------hCCc
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGADQ---YLVSSDATRMQEA-------ADSL  245 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~~~---vv~~~~~~~~~~~-------~~~~  245 (357)
                      .++++||+|+ |++|.++++.+...|++|+++++++++.+.+.++   .|.+.   ..|..+.+.++++       .+++
T Consensus         7 ~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~i   86 (334)
T PRK07109          7 GRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGPI   86 (334)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCCC
Confidence            4678999987 9999999999988999999999988776544332   45332   2466665444433       2379


Q ss_pred             cEEEEcCCC
Q 018382          246 DYIIDTVPA  254 (357)
Q Consensus       246 d~v~d~~g~  254 (357)
                      |++|+++|.
T Consensus        87 D~lInnAg~   95 (334)
T PRK07109         87 DTWVNNAMV   95 (334)
T ss_pred             CEEEECCCc
Confidence            999999885

>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1

Probab=97.11  E-value=0.0021  Score=53.05  Aligned_cols=98  Identities=20%  Similarity=0.165  Sum_probs=65.7

Q ss_pred             CCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEc-C-------------------CChhHHH
Q 018382          180 SGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLV-S-------------------SDATRMQ  239 (357)
Q Consensus       180 ~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~-~-------------------~~~~~~~  239 (357)
                      +..+|+|+|+|.+|+.|+++++.+|++|++.+...++.+.... .+...+.. .                   .....+.
T Consensus        19 ~p~~vvv~G~G~vg~gA~~~~~~lGa~v~~~d~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~   97 (168)
T PF01262_consen   19 PPAKVVVTGAGRVGQGAAEIAKGLGAEVVVPDERPERLRQLES-LGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFA   97 (168)
T ss_dssp             -T-EEEEESTSHHHHHHHHHHHHTT-EEEEEESSHHHHHHHHH-TTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHH
T ss_pred             CCeEEEEECCCHHHHHHHHHHhHCCCEEEeccCCHHHHHhhhc-ccCceEEEcccccccccccchhhhhHHHHHhHHHHH
Confidence            3478999999999999999999999999999998888777766 55443322 1                   0012233


Q ss_pred             HhhCCccEEEEcC---CC--CC-ChHHHHhccccCCeEEEEccCC
Q 018382          240 EAADSLDYIIDTV---PA--NH-PLEPYLSLLKLDGKLILTGVIN  278 (357)
Q Consensus       240 ~~~~~~d~v~d~~---g~--~~-~~~~~~~~l~~~G~~v~~g~~~  278 (357)
                      +....+|+++.+.   +.  +. ..+..++.|+++..++++....
T Consensus        98 ~~i~~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~gsvIvDis~D~  142 (168)
T PF01262_consen   98 EFIAPADIVIGNGLYWGKRAPRLVTEEMVKSMKPGSVIVDISCDQ  142 (168)
T ss_dssp             HHHHH-SEEEEHHHBTTSS---SBEHHHHHTSSTTEEEEETTGGG
T ss_pred             HHHhhCcEEeeecccCCCCCCEEEEhHHhhccCCCceEEEEEecC
Confidence            3344789998643   11  11 3467888899998899886543

4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=97.11  E-value=0.01  Score=50.62  Aligned_cols=116  Identities=13%  Similarity=0.060  Sum_probs=72.9

Q ss_pred             CCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcH-HHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCCCh
Q 018382          180 SGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDK-KRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPL  258 (357)
Q Consensus       180 ~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~-~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~~  258 (357)
                      .|++|||+|+|.+|..-++.+...|++|++++.... ....+.+ .|.-..+. ++..  .....++++||-+++....-
T Consensus         8 ~gk~vlVvGgG~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~~-~~~i~~~~-~~~~--~~dl~~~~lVi~at~d~~ln   83 (205)
T TIGR01470         8 EGRAVLVVGGGDVALRKARLLLKAGAQLRVIAEELESELTLLAE-QGGITWLA-RCFD--ADILEGAFLVIAATDDEELN   83 (205)
T ss_pred             CCCeEEEECcCHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHHH-cCCEEEEe-CCCC--HHHhCCcEEEEECCCCHHHH
Confidence            578999999999999999999999999999887543 3334444 34222221 1111  22335899999998887444


Q ss_pred             HHHHhccccCCeEEEEccCCCCcccchHHHh-hccceEEEEe
Q 018382          259 EPYLSLLKLDGKLILTGVINTPMQFLTPMVM-LGRKAITGSF  299 (357)
Q Consensus       259 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~i~g~~  299 (357)
                      .......+..|..|.........+|.....+ ...+++.-+.
T Consensus        84 ~~i~~~a~~~~ilvn~~d~~e~~~f~~pa~~~~g~l~iaisT  125 (205)
T TIGR01470        84 RRVAHAARARGVPVNVVDDPELCSFIFPSIVDRSPVVVAISS  125 (205)
T ss_pred             HHHHHHHHHcCCEEEECCCcccCeEEEeeEEEcCCEEEEEEC
Confidence            4566666777888876554443444333332 2334444333

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PRK07060 short chain dehydrogenase; Provisional

Probab=97.10  E-value=0.004  Score=54.44  Aligned_cols=75  Identities=16%  Similarity=0.210  Sum_probs=57.2

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcE-EEcCCChhHHHHhh---CCccEEEEcCCC
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQ-YLVSSDATRMQEAA---DSLDYIIDTVPA  254 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~---~~~d~v~d~~g~  254 (357)
                      ++++++|+|+ |.+|..+++.+...|++|++++++.++.+.+.+..+... ..|..+.+.+.+..   .++|++|+++|.
T Consensus         8 ~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~d~vi~~ag~   87 (245)
T PRK07060          8 SGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRLDVGDDAAIRAALAAAGAFDGLVNCAGI   87 (245)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCHHHHHHHHHHhCCCCEEEECCCC
Confidence            5688999987 999999999999999999999998877766666456433 34666655444433   368999999875

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=97.09  E-value=0.0055  Score=54.65  Aligned_cols=97  Identities=19%  Similarity=0.232  Sum_probs=73.6

Q ss_pred             ccccchhhhhhhhhhccCCCCCCCeEEEEecCh-HHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhH
Q 018382          159 APLLCAGVTVFSPLSHFGLKQSGLRGGILGLGG-VGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATR  237 (357)
Q Consensus       159 a~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~-~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~  237 (357)
                      ..+||.....+..+++...--.|++|+|+|.|. +|.-++.++...|++|++..+...                     .
T Consensus       136 ~~~PcTp~ai~~ll~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t~---------------------~  194 (286)
T PRK14175        136 TFVPCTPLGIMEILKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRSK---------------------D  194 (286)
T ss_pred             CCCCCcHHHHHHHHHHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCch---------------------h
Confidence            456777666777777766435899999999865 999999999999999998876421                     1


Q ss_pred             HHHhhCCccEEEEcCCCCCChHHHHhccccCCeEEEEccCC
Q 018382          238 MQEAADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVIN  278 (357)
Q Consensus       238 ~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~  278 (357)
                      +.+....+|+||.++|.+..+..  +.++++-.++++|...
T Consensus       195 l~~~~~~ADIVIsAvg~p~~i~~--~~vk~gavVIDvGi~~  233 (286)
T PRK14175        195 MASYLKDADVIVSAVGKPGLVTK--DVVKEGAVIIDVGNTP  233 (286)
T ss_pred             HHHHHhhCCEEEECCCCCcccCH--HHcCCCcEEEEcCCCc
Confidence            23445579999999999855444  4688888888888754

>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]

Probab=97.09  E-value=0.006  Score=50.33  Aligned_cols=97  Identities=22%  Similarity=0.221  Sum_probs=66.4

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHc-CCeEEEEeCCcHHHHHH---HHhcCCc--EEEcCCChhHHHHhhCCccEEEEcC
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAM-GHHVTVISSSDKKRVEA---MEHLGAD--QYLVSSDATRMQEAADSLDYIIDTV  252 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~-g~~V~~~~~~~~~~~~~---~~~~g~~--~vv~~~~~~~~~~~~~~~d~v~d~~  252 (357)
                      ++|+.++=+|+|. |..+++++... ..+||++.+++++.+..   .++||.+  .++..+.++.+..+. .+|.+|---
T Consensus        33 ~~g~~l~DIGaGt-Gsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g~Ap~~L~~~~-~~daiFIGG  110 (187)
T COG2242          33 RPGDRLWDIGAGT-GSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEGDAPEALPDLP-SPDAIFIGG  110 (187)
T ss_pred             CCCCEEEEeCCCc-cHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEeccchHhhcCCC-CCCEEEECC
Confidence            8899777778742 55667777433 34999999988876544   3458866  455555566655444 799999544


Q ss_pred             CCC--CChHHHHhccccCCeEEEEccC
Q 018382          253 PAN--HPLEPYLSLLKLDGKLILTGVI  277 (357)
Q Consensus       253 g~~--~~~~~~~~~l~~~G~~v~~g~~  277 (357)
                      |..  ..++.++..|+++|++|.-..+
T Consensus       111 g~~i~~ile~~~~~l~~ggrlV~nait  137 (187)
T COG2242         111 GGNIEEILEAAWERLKPGGRLVANAIT  137 (187)
T ss_pred             CCCHHHHHHHHHHHcCcCCeEEEEeec
Confidence            431  2466788899999999876443

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.08  E-value=0.0082  Score=48.60  Aligned_cols=105  Identities=24%  Similarity=0.280  Sum_probs=68.0

Q ss_pred             hhhccCCCCCCCeEEEEecChHHHHHHHHHHHcC-CeEEEEeCCcHHHHHHHHhcCCcE-EEcCCChhHHHHhhCCccEE
Q 018382          171 PLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMG-HHVTVISSSDKKRVEAMEHLGADQ-YLVSSDATRMQEAADSLDYI  248 (357)
Q Consensus       171 ~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g-~~V~~~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~~~~d~v  248 (357)
                      ++.+.+.-..+.+++|+|+|.+|..+++.+...| .+|++..++.++.+.+.+.++... .....+   ..+...++|+|
T Consensus         9 a~~~~~~~~~~~~i~iiG~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dvv   85 (155)
T cd01065           9 ALEEAGIELKGKKVLILGAGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYLD---LEELLAEADLI   85 (155)
T ss_pred             HHHhhCCCCCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeecc---hhhccccCCEE
Confidence            3444332245788999999999999999988886 589999998887776666566431 011111   12234689999


Q ss_pred             EEcCCCCCC----hHHHHhccccCCeEEEEccCC
Q 018382          249 IDTVPANHP----LEPYLSLLKLDGKLILTGVIN  278 (357)
Q Consensus       249 ~d~~g~~~~----~~~~~~~l~~~G~~v~~g~~~  278 (357)
                      +.+++....    .......++++..++.++...
T Consensus        86 i~~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~~~  119 (155)
T cd01065          86 INTTPVGMKPGDELPLPPSLLKPGGVVYDVVYNP  119 (155)
T ss_pred             EeCcCCCCCCCCCCCCCHHHcCCCCEEEEcCcCC
Confidence            999887632    112234466777777775543

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PRK12939 short chain dehydrogenase; Provisional

Probab=97.06  E-value=0.007  Score=53.04  Aligned_cols=75  Identities=19%  Similarity=0.171  Sum_probs=53.8

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc---CCc---EEEcCCChhHHHHhh-------CCc
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL---GAD---QYLVSSDATRMQEAA-------DSL  245 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~---g~~---~vv~~~~~~~~~~~~-------~~~  245 (357)
                      ++++++|+|+ |++|..++..+...|++|+++.+++++.....+.+   +..   ...|..+.+.++++.       +++
T Consensus         6 ~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   85 (250)
T PRK12939          6 AGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGGL   85 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            4788999987 99999999999889999999998877655443322   322   223555554433322       479


Q ss_pred             cEEEEcCCC
Q 018382          246 DYIIDTVPA  254 (357)
Q Consensus       246 d~v~d~~g~  254 (357)
                      |++|.++|.
T Consensus        86 d~vi~~ag~   94 (250)
T PRK12939         86 DGLVNNAGI   94 (250)
T ss_pred             CEEEECCCC
Confidence            999999886

>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function

Probab=97.04  E-value=0.019  Score=51.75  Aligned_cols=157  Identities=17%  Similarity=0.073  Sum_probs=90.1

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHH-HcC-CeEEEEeCCcHHHHHHHHhcC-CcEEEcCCChhHHHHhh-CCccEEEEcCCC
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAK-AMG-HHVTVISSSDKKRVEAMEHLG-ADQYLVSSDATRMQEAA-DSLDYIIDTVPA  254 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~-~~g-~~V~~~~~~~~~~~~~~~~~g-~~~vv~~~~~~~~~~~~-~~~d~v~d~~g~  254 (357)
                      ..+.|+|+++ +-+++.++.+++ ..+ .+++.+++...+ ...+. +| .+.++.+++   +.++. ...-+++|..|+
T Consensus       135 ga~~vvl~SASSKTA~glA~~L~~~~~~~~~vglTS~~N~-~Fve~-lg~Yd~V~~Yd~---i~~l~~~~~~v~VDfaG~  209 (314)
T PF11017_consen  135 GAAQVVLSSASSKTAIGLAYCLKKQRGPPKVVGLTSARNV-AFVES-LGCYDEVLTYDD---IDSLDAPQPVVIVDFAGN  209 (314)
T ss_pred             CccEEEEeccchHHHHHHHHHhhccCCCceEEEEecCcch-hhhhc-cCCceEEeehhh---hhhccCCCCEEEEECCCC
Confidence            3466777776 788888888888 444 489998876444 34444 88 588887754   34443 356678999999


Q ss_pred             CCChHHHHhccccCC-eEEEEccCCCC-------------cccchHHHhhccceEEEEeecCHHHHHHHHHHHHhcCCCc
Q 018382          255 NHPLEPYLSLLKLDG-KLILTGVINTP-------------MQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTS  320 (357)
Q Consensus       255 ~~~~~~~~~~l~~~G-~~v~~g~~~~~-------------~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~  320 (357)
                      ......+.+.+...= ..+.+|.+...             ..|.....+.+.+...|......+..+...+++++. ..-
T Consensus       210 ~~~~~~Lh~~l~d~l~~~~~VG~th~~~~~~~~~l~g~~~~~FFAp~~~~kr~~~~G~~~~~~r~~~aw~~f~~~~-~~w  288 (314)
T PF11017_consen  210 GEVLAALHEHLGDNLVYSCLVGATHWDKVEAPADLPGPRPEFFFAPDQIDKRIKEWGAAEFFQRMAAAWKRFAADA-QPW  288 (314)
T ss_pred             HHHHHHHHHHHhhhhhEEEEEEccCccccCccccCCCCCcEEEeChHHHHHHHHHhCHHHHHHHHHHHHHHHHHhh-cCc
Confidence            866666666666643 35566654321             112222222222222222111111112222233222 111


Q ss_pred             -cE-EEeecccHHHHHHHHHcCCc
Q 018382          321 -MI-EVIKMDYVNKAFERLEKNDV  342 (357)
Q Consensus       321 -~i-~~~~~~~~~~a~~~~~~~~~  342 (357)
                       .+ ++-+.+.++++++.+.+++.
T Consensus       289 l~~~~~~G~ea~~~~y~~l~~G~v  312 (314)
T PF11017_consen  289 LKVEEVAGPEAVEAAYQDLLAGKV  312 (314)
T ss_pred             EEEEEecCHHHHHHHHHHHhcCCC
Confidence             24 77889999999999988763

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=97.03  E-value=0.0032  Score=56.16  Aligned_cols=109  Identities=18%  Similarity=0.244  Sum_probs=69.5

Q ss_pred             hhhhhhccC--CCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCcEE-EcCCChhHHHHhhC
Q 018382          168 VFSPLSHFG--LKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGADQY-LVSSDATRMQEAAD  243 (357)
Q Consensus       168 a~~~l~~~~--~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~~v-v~~~~~~~~~~~~~  243 (357)
                      -+.+|....  ...++++++|+|+|+.+.+++.-+...|+ +++++.|+.+|.+.+.+.++.... +.......+.... 
T Consensus       111 ~~~~L~~~~~~~~~~~~~vlilGAGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~~~~~~~~~-  189 (283)
T COG0169         111 FLRALKEFGLPVDVTGKRVLILGAGGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEAAALADLEGLE-  189 (283)
T ss_pred             HHHHHHhcCCCcccCCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccccccccccccccccc-
Confidence            344555433  22468999999999999999999999997 899999999998888876763221 1000100011111 


Q ss_pred             CccEEEEcCCCCCChH-----HHHhccccCCeEEEEccC
Q 018382          244 SLDYIIDTVPANHPLE-----PYLSLLKLDGKLILTGVI  277 (357)
Q Consensus       244 ~~d~v~d~~g~~~~~~-----~~~~~l~~~G~~v~~g~~  277 (357)
                      .+|+++|++.....-.     ....++++.-.+.++-..
T Consensus       190 ~~dliINaTp~Gm~~~~~~~~~~~~~l~~~~~v~D~vY~  228 (283)
T COG0169         190 EADLLINATPVGMAGPEGDSPVPAELLPKGAIVYDVVYN  228 (283)
T ss_pred             ccCEEEECCCCCCCCCCCCCCCcHHhcCcCCEEEEeccC
Confidence            5999999886642111     014556666666665433

>TIGR00406 prmA ribosomal protein L11 methyltransferase

Probab=97.03  E-value=0.004  Score=56.20  Aligned_cols=96  Identities=21%  Similarity=0.214  Sum_probs=61.8

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcC---Cc-EEEcCCChhHHHHhhCCccEEEEcCC
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLG---AD-QYLVSSDATRMQEAADSLDYIIDTVP  253 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g---~~-~vv~~~~~~~~~~~~~~~d~v~d~~g  253 (357)
                      .++++||-+|+|. |..++.+++ .|+ +|++++.++...+.+++...   .. .+... ..+......+++|+|+....
T Consensus       158 ~~g~~VLDvGcGs-G~lai~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~-~~~~~~~~~~~fDlVvan~~  234 (288)
T TIGR00406       158 LKDKNVIDVGCGS-GILSIAALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVK-LIYLEQPIEGKADVIVANIL  234 (288)
T ss_pred             CCCCEEEEeCCCh-hHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEE-ecccccccCCCceEEEEecC
Confidence            5789999999876 777777665 466 89999999887766655332   11 11111 11111122358999986543


Q ss_pred             CC---CChHHHHhccccCCeEEEEccC
Q 018382          254 AN---HPLEPYLSLLKLDGKLILTGVI  277 (357)
Q Consensus       254 ~~---~~~~~~~~~l~~~G~~v~~g~~  277 (357)
                      ..   ..+..+.+.|+++|.++..|..
T Consensus       235 ~~~l~~ll~~~~~~LkpgG~li~sgi~  261 (288)
T TIGR00406       235 AEVIKELYPQFSRLVKPGGWLILSGIL  261 (288)
T ss_pred             HHHHHHHHHHHHHHcCCCcEEEEEeCc
Confidence            32   2345677899999999877654

Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.

>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2

Probab=97.02  E-value=0.0024  Score=54.56  Aligned_cols=101  Identities=26%  Similarity=0.318  Sum_probs=63.4

Q ss_pred             hhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC--eEEEEeCCcHHHHHHHHh---cCCcEE-EcCCChhHHHHhhCCc
Q 018382          172 LSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH--HVTVISSSDKKRVEAMEH---LGADQY-LVSSDATRMQEAADSL  245 (357)
Q Consensus       172 l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~--~V~~~~~~~~~~~~~~~~---~g~~~v-v~~~~~~~~~~~~~~~  245 (357)
                      +..+. +++|++||-+|+|. |+.++-+++..|.  +|+.+...++-.+.+++.   +|.+.+ +...+...-.....+|
T Consensus        65 l~~L~-l~pg~~VLeIGtGs-GY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gdg~~g~~~~apf  142 (209)
T PF01135_consen   65 LEALD-LKPGDRVLEIGTGS-GYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGDGSEGWPEEAPF  142 (209)
T ss_dssp             HHHTT-C-TT-EEEEES-TT-SHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES-GGGTTGGG-SE
T ss_pred             HHHHh-cCCCCEEEEecCCC-cHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcchhhccccCCCc
Confidence            33344 59999999998753 7888888888775  688888887754444432   454322 2222221111123489


Q ss_pred             cEEEEcCCCCCChHHHHhccccCCeEEEE
Q 018382          246 DYIIDTVPANHPLEPYLSLLKLDGKLILT  274 (357)
Q Consensus       246 d~v~d~~g~~~~~~~~~~~l~~~G~~v~~  274 (357)
                      |.|+-+.+-...-...++.|+++|++|..
T Consensus       143 D~I~v~~a~~~ip~~l~~qL~~gGrLV~p  171 (209)
T PF01135_consen  143 DRIIVTAAVPEIPEALLEQLKPGGRLVAP  171 (209)
T ss_dssp             EEEEESSBBSS--HHHHHTEEEEEEEEEE
T ss_pred             CEEEEeeccchHHHHHHHhcCCCcEEEEE
Confidence            99998877775567899999999999874

1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=97.01  E-value=0.0011  Score=49.93  Aligned_cols=93  Identities=20%  Similarity=0.116  Sum_probs=62.7

Q ss_pred             CCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCCChH
Q 018382          180 SGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLE  259 (357)
Q Consensus       180 ~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~~~  259 (357)
                      .+++|||+|+|.+|..-++.+...|++|+++++..   ...+   +.-... .+  .+ +....++++||.+.+....-+
T Consensus         6 ~~~~vlVvGgG~va~~k~~~Ll~~gA~v~vis~~~---~~~~---~~i~~~-~~--~~-~~~l~~~~lV~~at~d~~~n~   75 (103)
T PF13241_consen    6 KGKRVLVVGGGPVAARKARLLLEAGAKVTVISPEI---EFSE---GLIQLI-RR--EF-EEDLDGADLVFAATDDPELNE   75 (103)
T ss_dssp             TT-EEEEEEESHHHHHHHHHHCCCTBEEEEEESSE---HHHH---TSCEEE-ES--S--GGGCTTESEEEE-SS-HHHHH
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCch---hhhh---hHHHHH-hh--hH-HHHHhhheEEEecCCCHHHHH
Confidence            57899999999999999999999999999999875   1111   221121 11  12 233458999999998874455


Q ss_pred             HHHhccccCCeEEEEccCCCCcc
Q 018382          260 PYLSLLKLDGKLILTGVINTPMQ  282 (357)
Q Consensus       260 ~~~~~l~~~G~~v~~g~~~~~~~  282 (357)
                      ...+..+..|.++.....+...+
T Consensus        76 ~i~~~a~~~~i~vn~~D~p~~~d   98 (103)
T PF13241_consen   76 AIYADARARGILVNVVDDPELCD   98 (103)
T ss_dssp             HHHHHHHHTTSEEEETT-CCCCS
T ss_pred             HHHHHHhhCCEEEEECCCcCCCe
Confidence            66666777899998876554433

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=97.01  E-value=0.0057  Score=57.89  Aligned_cols=76  Identities=14%  Similarity=0.114  Sum_probs=58.8

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCCC
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHP  257 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~  257 (357)
                      -.+.+|+|+|+|.+|.+++..+...|+ +++++.|+.++.+.+.+.++...++..   +.+......+|+||+|++.+..
T Consensus       179 l~~kkvlviGaG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~---~~l~~~l~~aDiVI~aT~a~~~  255 (414)
T PRK13940        179 ISSKNVLIIGAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYL---SELPQLIKKADIIIAAVNVLEY  255 (414)
T ss_pred             ccCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecH---HHHHHHhccCCEEEECcCCCCe
Confidence            467899999999999999999999997 799999998888877776763223322   2334445679999999998743

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=97.00  E-value=0.0033  Score=59.34  Aligned_cols=91  Identities=19%  Similarity=0.117  Sum_probs=65.2

Q ss_pred             EEEEecChHHHHHHHHHHHcC-C-eEEEEeCCcHHHHHHHHhcC----CcEEEcCCChhHHHHhhCCccEEEEcCCCCCC
Q 018382          184 GGILGLGGVGHMGVLIAKAMG-H-HVTVISSSDKKRVEAMEHLG----ADQYLVSSDATRMQEAADSLDYIIDTVPANHP  257 (357)
Q Consensus       184 VlI~G~g~~G~~ai~la~~~g-~-~V~~~~~~~~~~~~~~~~~g----~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~  257 (357)
                      |+|+|+|.+|..+++.+...+ . +|++.+++.++.+.+.+++.    ....+|..+.+.+.++..+.|+|++|+|....
T Consensus         1 IlvlG~G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp~~~   80 (386)
T PF03435_consen    1 ILVLGAGRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAELLRGCDVVINCAGPFFG   80 (386)
T ss_dssp             EEEE--SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SSGGGH
T ss_pred             CEEEcCcHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHHHHhcCCEEEECCccchh
Confidence            688999999999999998775 4 89999999999887765322    23446777777788888899999999998734


Q ss_pred             hHHHHhccccCCeEEEE
Q 018382          258 LEPYLSLLKLDGKLILT  274 (357)
Q Consensus       258 ~~~~~~~l~~~G~~v~~  274 (357)
                      ...+..+++.+-.+++.
T Consensus        81 ~~v~~~~i~~g~~yvD~   97 (386)
T PF03435_consen   81 EPVARACIEAGVHYVDT   97 (386)
T ss_dssp             HHHHHHHHHHT-EEEES
T ss_pred             HHHHHHHHHhCCCeecc
Confidence            44566677777788884

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=97.00  E-value=0.0034  Score=53.42  Aligned_cols=115  Identities=17%  Similarity=0.086  Sum_probs=67.3

Q ss_pred             CCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcH-HHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCCCh
Q 018382          180 SGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDK-KRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPL  258 (357)
Q Consensus       180 ~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~-~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~~  258 (357)
                      .+++|||+|+|.+|...++.+...|++|+++.+... ....+.. -+.-. +..+  .+......++|+||-+++.. ..
T Consensus         9 ~~k~vLVIGgG~va~~ka~~Ll~~ga~V~VIs~~~~~~l~~l~~-~~~i~-~~~~--~~~~~~l~~adlViaaT~d~-el   83 (202)
T PRK06718          9 SNKRVVIVGGGKVAGRRAITLLKYGAHIVVISPELTENLVKLVE-EGKIR-WKQK--EFEPSDIVDAFLVIAATNDP-RV   83 (202)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCHHHHHHHh-CCCEE-EEec--CCChhhcCCceEEEEcCCCH-HH
Confidence            578999999999999999888888999999876532 2222222 22111 1111  11122235799999999887 55


Q ss_pred             HHHHhccccCCeEEEEccCCCCcccchHHHh-hccceEEEEe
Q 018382          259 EPYLSLLKLDGKLILTGVINTPMQFLTPMVM-LGRKAITGSF  299 (357)
Q Consensus       259 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~i~g~~  299 (357)
                      +..+...+..+.++.........+|.....+ ...+++.-+.
T Consensus        84 N~~i~~~a~~~~lvn~~d~~~~~~f~~Pa~~~~g~l~iaIsT  125 (202)
T PRK06718         84 NEQVKEDLPENALFNVITDAESGNVVFPSALHRGKLTISVST  125 (202)
T ss_pred             HHHHHHHHHhCCcEEECCCCccCeEEEeeEEEcCCeEEEEEC
Confidence            5544444455667666544333344333322 2334444433

>PRK06057 short chain dehydrogenase; Provisional

Probab=97.00  E-value=0.0055  Score=54.10  Aligned_cols=75  Identities=19%  Similarity=0.137  Sum_probs=55.6

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCc-EEEcCCChhHHHHhh-------CCccEEEE
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGAD-QYLVSSDATRMQEAA-------DSLDYIID  250 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~~~-------~~~d~v~d  250 (357)
                      ++++|||+|+ |++|.++++.+...|++|+++++++.+.+...+.++.. ...|..+++.++++.       +++|+++.
T Consensus         6 ~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~   85 (255)
T PRK06057          6 AGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVDIAFN   85 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            5789999987 99999999999999999999999877766555545532 234666654433322       36899999


Q ss_pred             cCCC
Q 018382          251 TVPA  254 (357)
Q Consensus       251 ~~g~  254 (357)
                      ++|.
T Consensus        86 ~ag~   89 (255)
T PRK06057         86 NAGI   89 (255)
T ss_pred             CCCc
Confidence            8875

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=96.98  E-value=0.0052  Score=54.50  Aligned_cols=75  Identities=21%  Similarity=0.166  Sum_probs=55.1

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCc---EEEcCCChhHHHH----h---hCCccEE
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGAD---QYLVSSDATRMQE----A---ADSLDYI  248 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~----~---~~~~d~v  248 (357)
                      +++++||+|+ +++|.++++.+...|++|+++.+++++.+.+.++++..   ...|..+.+.++.    +   .+.+|++
T Consensus         5 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   84 (263)
T PRK06200          5 HGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDCF   84 (263)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            5688999987 99999999999889999999999988877776655532   2235455433322    2   2369999


Q ss_pred             EEcCCC
Q 018382          249 IDTVPA  254 (357)
Q Consensus       249 ~d~~g~  254 (357)
                      ++++|.
T Consensus        85 i~~ag~   90 (263)
T PRK06200         85 VGNAGI   90 (263)
T ss_pred             EECCCC
Confidence            999874

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.98  E-value=0.0077  Score=58.06  Aligned_cols=75  Identities=16%  Similarity=0.209  Sum_probs=52.9

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCc--HHHHHHHHhcCCc-EEEcCCChhHHHHhh-------CCccEE
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSD--KKRVEAMEHLGAD-QYLVSSDATRMQEAA-------DSLDYI  248 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~--~~~~~~~~~~g~~-~vv~~~~~~~~~~~~-------~~~d~v  248 (357)
                      +++++||+|+ |++|.++++.+...|++|+++.++.  ++...+.++++.. ..+|..+.+.++.+.       +++|++
T Consensus       209 ~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~v  288 (450)
T PRK08261        209 AGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLDIV  288 (450)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCCEE
Confidence            5789999987 9999999999999999999988743  3334444445643 335666654433322       268999


Q ss_pred             EEcCCC
Q 018382          249 IDTVPA  254 (357)
Q Consensus       249 ~d~~g~  254 (357)
                      |+++|.
T Consensus       289 i~~AG~  294 (450)
T PRK08261        289 VHNAGI  294 (450)
T ss_pred             EECCCc
Confidence            999884

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=96.97  E-value=0.0069  Score=54.46  Aligned_cols=97  Identities=19%  Similarity=0.147  Sum_probs=63.8

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCC----cEEEcCCChhHHHHhhCCccEEEEcCC
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGA----DQYLVSSDATRMQEAADSLDYIIDTVP  253 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~----~~vv~~~~~~~~~~~~~~~d~v~d~~g  253 (357)
                      ..+++|+|+|+|++|.+++..+...|+ +|+++.++.++.+.+.+.++.    ..+....   .+.+....+|+|++|+.
T Consensus       125 ~~~k~vlIlGaGGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~~---~~~~~~~~aDiVInaTp  201 (284)
T PRK12549        125 ASLERVVQLGAGGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATAGS---DLAAALAAADGLVHATP  201 (284)
T ss_pred             ccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEecc---chHhhhCCCCEEEECCc
Confidence            356889999999999999999999998 899999998888777665531    2222211   12223357999999964


Q ss_pred             CCC----ChHHHHhccccCCeEEEEccCC
Q 018382          254 ANH----PLEPYLSLLKLDGKLILTGVIN  278 (357)
Q Consensus       254 ~~~----~~~~~~~~l~~~G~~v~~g~~~  278 (357)
                      ...    ......+.+++...++++-..+
T Consensus       202 ~Gm~~~~~~~~~~~~l~~~~~v~DivY~P  230 (284)
T PRK12549        202 TGMAKHPGLPLPAELLRPGLWVADIVYFP  230 (284)
T ss_pred             CCCCCCCCCCCCHHHcCCCcEEEEeeeCC
Confidence            321    0111224566666666664433

>PRK06484 short chain dehydrogenase; Validated

Probab=96.97  E-value=0.0093  Score=58.58  Aligned_cols=76  Identities=20%  Similarity=0.221  Sum_probs=57.2

Q ss_pred             CCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCc---EEEcCCChhHHHHh----h---CCccE
Q 018382          179 QSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGAD---QYLVSSDATRMQEA----A---DSLDY  247 (357)
Q Consensus       179 ~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~~----~---~~~d~  247 (357)
                      ..++++||+|+ +++|.+.++.+...|++|+++.+++++.+.+.+.++..   ...|..+++.++++    .   +.+|+
T Consensus       267 ~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~  346 (520)
T PRK06484        267 ESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLDV  346 (520)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            45788999987 99999999999889999999999988877777656633   23455555433332    2   36999


Q ss_pred             EEEcCCC
Q 018382          248 IIDTVPA  254 (357)
Q Consensus       248 v~d~~g~  254 (357)
                      +|+++|.
T Consensus       347 li~nAg~  353 (520)
T PRK06484        347 LVNNAGI  353 (520)
T ss_pred             EEECCCC
Confidence            9999875

>PRK12367 short chain dehydrogenase; Provisional

Probab=96.96  E-value=0.0051  Score=54.15  Aligned_cols=74  Identities=22%  Similarity=0.232  Sum_probs=52.3

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCc--EEEcCCChhHHHHhhCCccEEEEcCCC
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGAD--QYLVSSDATRMQEAADSLDYIIDTVPA  254 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~--~vv~~~~~~~~~~~~~~~d~v~d~~g~  254 (357)
                      .+++++|+|+ |++|.++++.+...|++|++++++......... .+..  ...|..+.+.+.+..+.+|++++++|.
T Consensus        13 ~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~iDilVnnAG~   89 (245)
T PRK12367         13 QGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESND-ESPNEWIKWECGKEESLDKQLASLDVLILNHGI   89 (245)
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhc-cCCCeEEEeeCCCHHHHHHhcCCCCEEEECCcc
Confidence            4688999987 999999999998899999999887622211111 1211  234566666566666689999999975

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=96.94  E-value=0.0079  Score=53.75  Aligned_cols=106  Identities=18%  Similarity=0.082  Sum_probs=67.9

Q ss_pred             hhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCC---cEEEcCCChhHHHHhhCC
Q 018382          168 VFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGA---DQYLVSSDATRMQEAADS  244 (357)
Q Consensus       168 a~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~---~~vv~~~~~~~~~~~~~~  244 (357)
                      ...+|.......++++++|+|+|++|.+++..+...|.+|++..+++++.+.+.+.++.   ...+...     ......
T Consensus       104 ~~~~l~~~~~~~~~k~vliiGaGg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~~~~~~~~-----~~~~~~  178 (270)
T TIGR00507       104 LVSDLERLIPLRPNQRVLIIGAGGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGEIQAFSMD-----ELPLHR  178 (270)
T ss_pred             HHHHHHhcCCCccCCEEEEEcCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCceEEechh-----hhcccC
Confidence            33344432332457889999999999999988888899999999988877666554432   1222111     112246


Q ss_pred             ccEEEEcCCCCC--Ch---HHHHhccccCCeEEEEccCC
Q 018382          245 LDYIIDTVPANH--PL---EPYLSLLKLDGKLILTGVIN  278 (357)
Q Consensus       245 ~d~v~d~~g~~~--~~---~~~~~~l~~~G~~v~~g~~~  278 (357)
                      +|+|++|++...  ..   ......++++..++++...+
T Consensus       179 ~DivInatp~gm~~~~~~~~~~~~~l~~~~~v~D~~y~p  217 (270)
T TIGR00507       179 VDLIINATSAGMSGNIDEPPVPAEKLKEGMVVYDMVYNP  217 (270)
T ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHcCCCCEEEEeccCC
Confidence            999999998641  11   11234567777777775443

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>PRK12829 short chain dehydrogenase; Provisional

Probab=96.94  E-value=0.0055  Score=54.25  Aligned_cols=77  Identities=18%  Similarity=0.217  Sum_probs=55.9

Q ss_pred             CCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCc----EEEcCCChhHHHHh-------hCCcc
Q 018382          179 QSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGAD----QYLVSSDATRMQEA-------ADSLD  246 (357)
Q Consensus       179 ~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~----~vv~~~~~~~~~~~-------~~~~d  246 (357)
                      -+++++||+|+ |.+|..+++.+...|++|+++.++++..+.+.+..+..    ...|..+++.+.+.       ..++|
T Consensus         9 ~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   88 (264)
T PRK12829          9 LDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGGLD   88 (264)
T ss_pred             cCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence            46789999987 99999999999999999999999877666655433322    23455555443322       24799


Q ss_pred             EEEEcCCCC
Q 018382          247 YIIDTVPAN  255 (357)
Q Consensus       247 ~v~d~~g~~  255 (357)
                      +||.++|..
T Consensus        89 ~vi~~ag~~   97 (264)
T PRK12829         89 VLVNNAGIA   97 (264)
T ss_pred             EEEECCCCC
Confidence            999988754

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=96.91  E-value=0.0071  Score=53.62  Aligned_cols=75  Identities=19%  Similarity=0.087  Sum_probs=54.0

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCc---EEEcCCChhHHH----Hhh---CCccEE
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGAD---QYLVSSDATRMQ----EAA---DSLDYI  248 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~----~~~---~~~d~v  248 (357)
                      ++++++|+|+ |++|.++++.+...|++|+++.+++++.+.+.+..+..   ...|..+.+.+.    ++.   +.+|++
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   83 (262)
T TIGR03325         4 KGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDCL   83 (262)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCEE
Confidence            4789999987 99999999999889999999999887776666544422   123555543322    222   378999


Q ss_pred             EEcCCC
Q 018382          249 IDTVPA  254 (357)
Q Consensus       249 ~d~~g~  254 (357)
                      ++++|.
T Consensus        84 i~~Ag~   89 (262)
T TIGR03325        84 IPNAGI   89 (262)
T ss_pred             EECCCC
Confidence            999873

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK05866 short chain dehydrogenase; Provisional

Probab=96.89  E-value=0.005  Score=55.76  Aligned_cols=76  Identities=17%  Similarity=0.232  Sum_probs=53.6

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc---CCc-E--EEcCCChhHHHHhh-------CCc
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL---GAD-Q--YLVSSDATRMQEAA-------DSL  245 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~---g~~-~--vv~~~~~~~~~~~~-------~~~  245 (357)
                      .++++||+|+ |++|.+.++.+...|++|++++++.++.+.+.+.+   +.+ .  ..|..+.+.+.+..       +.+
T Consensus        39 ~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~i  118 (293)
T PRK05866         39 TGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGGV  118 (293)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            4578999987 99999999988888999999999987765554322   322 1  23555544333322       378


Q ss_pred             cEEEEcCCCC
Q 018382          246 DYIIDTVPAN  255 (357)
Q Consensus       246 d~v~d~~g~~  255 (357)
                      |++++++|..
T Consensus       119 d~li~~AG~~  128 (293)
T PRK05866        119 DILINNAGRS  128 (293)
T ss_pred             CEEEECCCCC
Confidence            9999998753

>PRK06500 short chain dehydrogenase; Provisional

Probab=96.89  E-value=0.0076  Score=52.82  Aligned_cols=75  Identities=19%  Similarity=0.148  Sum_probs=54.4

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcE---EEcCCChhHHH----Hh---hCCccEE
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQ---YLVSSDATRMQ----EA---ADSLDYI  248 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~----~~---~~~~d~v  248 (357)
                      ++++++|+|+ |++|.+.++.+...|++|+++++++++.+.+.++++...   ..|..+.+.+.    .+   .+++|++
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   84 (249)
T PRK06500          5 QGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDAV   84 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            4678999987 999999999999999999999998777666665566432   13444433222    22   2378999


Q ss_pred             EEcCCC
Q 018382          249 IDTVPA  254 (357)
Q Consensus       249 ~d~~g~  254 (357)
                      |.++|.
T Consensus        85 i~~ag~   90 (249)
T PRK06500         85 FINAGV   90 (249)
T ss_pred             EECCCC
Confidence            999875

>PRK08618 ornithine cyclodeaminase; Validated

Probab=96.88  E-value=0.0097  Score=54.69  Aligned_cols=99  Identities=17%  Similarity=0.167  Sum_probs=68.1

Q ss_pred             hccCCCCCCCeEEEEecChHHHHHHHHH-HHcCC-eEEEEeCCcHHHHHHHHhc----CCcEEEcCCChhHHHHhhCCcc
Q 018382          173 SHFGLKQSGLRGGILGLGGVGHMGVLIA-KAMGH-HVTVISSSDKKRVEAMEHL----GADQYLVSSDATRMQEAADSLD  246 (357)
Q Consensus       173 ~~~~~~~~~~~VlI~G~g~~G~~ai~la-~~~g~-~V~~~~~~~~~~~~~~~~~----g~~~vv~~~~~~~~~~~~~~~d  246 (357)
                      ..+.+ ...++++|+|+|..|.+.+..+ ...++ +|.+..+++++.+.+.+++    +... ....+   .++.....|
T Consensus       120 ~~la~-~~~~~v~iiGaG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~~-~~~~~---~~~~~~~aD  194 (325)
T PRK08618        120 KYLAR-EDAKTLCLIGTGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTEI-YVVNS---ADEAIEEAD  194 (325)
T ss_pred             HHhcC-CCCcEEEEECCcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCcE-EEeCC---HHHHHhcCC
Confidence            44444 4567899999999998777554 45677 7888889888877665533    4331 12222   233446899


Q ss_pred             EEEEcCCCCCChHHHHhccccCCeEEEEccCC
Q 018382          247 YIIDTVPANHPLEPYLSLLKLDGKLILTGVIN  278 (357)
Q Consensus       247 ~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~  278 (357)
                      +|+.|++..... .. +.++++-.+..+|...
T Consensus       195 iVi~aT~s~~p~-i~-~~l~~G~hV~~iGs~~  224 (325)
T PRK08618        195 IIVTVTNAKTPV-FS-EKLKKGVHINAVGSFM  224 (325)
T ss_pred             EEEEccCCCCcc-hH-HhcCCCcEEEecCCCC
Confidence            999999887433 34 8889988888888754

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=96.87  E-value=0.0087  Score=53.88  Aligned_cols=86  Identities=16%  Similarity=0.208  Sum_probs=53.7

Q ss_pred             hhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCc---HHHHHHHHhcCCc-----EEEcCCChhHHHH
Q 018382          170 SPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSD---KKRVEAMEHLGAD-----QYLVSSDATRMQE  240 (357)
Q Consensus       170 ~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~---~~~~~~~~~~g~~-----~vv~~~~~~~~~~  240 (357)
                      .+|...+.--+++++||+|+|+.+.+++..+...|+ +++++.|++   ++.+.+.+.++..     .+....+.+.+.+
T Consensus       113 ~~l~~~~~~~~~k~vlvlGaGGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~~~~~~~~l~~  192 (288)
T PRK12749        113 RAIKESGFDIKGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAE  192 (288)
T ss_pred             HHHHhcCCCcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEEechhhhhhhhh
Confidence            344433321366899999999999987777777898 899999984   3666665545421     1222111111223


Q ss_pred             hhCCccEEEEcCCCC
Q 018382          241 AADSLDYIIDTVPAN  255 (357)
Q Consensus       241 ~~~~~d~v~d~~g~~  255 (357)
                      ....+|+|++++.-.
T Consensus       193 ~~~~aDivINaTp~G  207 (288)
T PRK12749        193 ALASADILTNGTKVG  207 (288)
T ss_pred             hcccCCEEEECCCCC
Confidence            334799999987543

>PRK07806 short chain dehydrogenase; Provisional

Probab=96.86  E-value=0.011  Score=51.90  Aligned_cols=97  Identities=15%  Similarity=0.195  Sum_probs=61.6

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcH-HHHHHHHh---cCCc---EEEcCCChhHHHHh----h---CC
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDK-KRVEAMEH---LGAD---QYLVSSDATRMQEA----A---DS  244 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~-~~~~~~~~---~g~~---~vv~~~~~~~~~~~----~---~~  244 (357)
                      +++++||+|+ |++|..+++.+...|.+|+++.++.+ +.+.+...   .+..   ...|..+++.++.+    .   ++
T Consensus         5 ~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   84 (248)
T PRK07806          5 PGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFGG   84 (248)
T ss_pred             CCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            4678999987 99999999998888999999888653 33322221   2322   12355555443322    1   36


Q ss_pred             ccEEEEcCCCCC-------------------ChHHHHhccccCCeEEEEcc
Q 018382          245 LDYIIDTVPANH-------------------PLEPYLSLLKLDGKLILTGV  276 (357)
Q Consensus       245 ~d~v~d~~g~~~-------------------~~~~~~~~l~~~G~~v~~g~  276 (357)
                      +|+++.+++...                   .++.+...+...|+++.++.
T Consensus        85 ~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS  135 (248)
T PRK07806         85 LDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTS  135 (248)
T ss_pred             CcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeC
Confidence            899998876421                   22334445556688887754

>PRK07825 short chain dehydrogenase; Provisional

Probab=96.85  E-value=0.0073  Score=53.88  Aligned_cols=75  Identities=19%  Similarity=0.231  Sum_probs=54.8

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcC-Cc-EEEcCCChhHHHH----h---hCCccEEE
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLG-AD-QYLVSSDATRMQE----A---ADSLDYII  249 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g-~~-~vv~~~~~~~~~~----~---~~~~d~v~  249 (357)
                      .++++||+|+ |++|..+++.+...|++|+++.+++++.+.+.+.++ .. ...|..+++.+.+    +   .+++|+++
T Consensus         4 ~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li   83 (273)
T PRK07825          4 RGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPIDVLV   83 (273)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            3578999987 999999999888889999999998887766655455 22 2246566543322    2   24789999


Q ss_pred             EcCCC
Q 018382          250 DTVPA  254 (357)
Q Consensus       250 d~~g~  254 (357)
                      +++|.
T Consensus        84 ~~ag~   88 (273)
T PRK07825         84 NNAGV   88 (273)
T ss_pred             ECCCc
Confidence            99875

>PLN00203 glutamyl-tRNA reductase

Probab=96.84  E-value=0.0093  Score=58.03  Aligned_cols=97  Identities=18%  Similarity=0.235  Sum_probs=65.4

Q ss_pred             CCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCCC--
Q 018382          181 GLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHP--  257 (357)
Q Consensus       181 ~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~--  257 (357)
                      +.+|+|+|+|.+|.+++..+...|+ +|+++.++.++.+.+.+.++...+ .....+.........|+||.|++....  
T Consensus       266 ~kkVlVIGAG~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i-~~~~~~dl~~al~~aDVVIsAT~s~~pvI  344 (519)
T PLN00203        266 SARVLVIGAGKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEI-IYKPLDEMLACAAEADVVFTSTSSETPLF  344 (519)
T ss_pred             CCEEEEEeCHHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCce-EeecHhhHHHHHhcCCEEEEccCCCCCee
Confidence            6889999999999999999999998 799999999988887776752111 111112233445689999999877533  


Q ss_pred             hHHHHhcccc----CC---eEEEEccCC
Q 018382          258 LEPYLSLLKL----DG---KLILTGVIN  278 (357)
Q Consensus       258 ~~~~~~~l~~----~G---~~v~~g~~~  278 (357)
                      ....++.+.+    .|   .+++++.+.
T Consensus       345 ~~e~l~~~~~~~~~~~~~~~~IDLAvPR  372 (519)
T PLN00203        345 LKEHVEALPPASDTVGGKRLFVDISVPR  372 (519)
T ss_pred             CHHHHHHhhhcccccCCCeEEEEeCCCC
Confidence            2334443322    12   366676653

>PRK06196 oxidoreductase; Provisional

Probab=96.81  E-value=0.0085  Score=54.82  Aligned_cols=75  Identities=20%  Similarity=0.232  Sum_probs=54.0

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcC-Cc-EEEcCCChhHHHHh----h---CCccEEE
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLG-AD-QYLVSSDATRMQEA----A---DSLDYII  249 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g-~~-~vv~~~~~~~~~~~----~---~~~d~v~  249 (357)
                      .++++||+|+ |++|.+++..+...|++|++++++.++.+.+.+.+. .. ...|..+.+.+++.    .   +++|+++
T Consensus        25 ~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~li  104 (315)
T PRK06196         25 SGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRIDILI  104 (315)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence            4678999987 999999999888889999999998877665544333 21 22455555443332    2   3799999


Q ss_pred             EcCCC
Q 018382          250 DTVPA  254 (357)
Q Consensus       250 d~~g~  254 (357)
                      +++|.
T Consensus       105 ~nAg~  109 (315)
T PRK06196        105 NNAGV  109 (315)
T ss_pred             ECCCC
Confidence            99874

>PRK07814 short chain dehydrogenase; Provisional

Probab=96.80  E-value=0.0081  Score=53.33  Aligned_cols=75  Identities=16%  Similarity=0.205  Sum_probs=53.7

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc---CCc-E--EEcCCChhHHHHh-------hCCc
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL---GAD-Q--YLVSSDATRMQEA-------ADSL  245 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~---g~~-~--vv~~~~~~~~~~~-------~~~~  245 (357)
                      +++++||+|+ |++|.++++.+...|++|+++++++++.+.+.+.+   +.. +  ..|..+.+.+.++       .+++
T Consensus         9 ~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   88 (263)
T PRK07814          9 DDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGRL   88 (263)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999987 89999999999889999999999877665544322   321 1  2455555443322       1378


Q ss_pred             cEEEEcCCC
Q 018382          246 DYIIDTVPA  254 (357)
Q Consensus       246 d~v~d~~g~  254 (357)
                      |++|+++|.
T Consensus        89 d~vi~~Ag~   97 (263)
T PRK07814         89 DIVVNNVGG   97 (263)
T ss_pred             CEEEECCCC
Confidence            999999874

>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.80  E-value=0.0078  Score=58.61  Aligned_cols=72  Identities=14%  Similarity=0.102  Sum_probs=53.7

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCC
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPAN  255 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~  255 (357)
                      .++++|+|+|.|..|++++++++..|++|++.+..+.+.+.+++ +|...+...+..+    ....+|+|+.+.|-.
T Consensus        10 ~~~~~v~V~G~G~sG~aa~~~L~~~G~~v~~~D~~~~~~~~l~~-~g~~~~~~~~~~~----~l~~~D~VV~SpGi~   81 (488)
T PRK03369         10 LPGAPVLVAGAGVTGRAVLAALTRFGARPTVCDDDPDALRPHAE-RGVATVSTSDAVQ----QIADYALVVTSPGFR   81 (488)
T ss_pred             cCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHh-CCCEEEcCcchHh----HhhcCCEEEECCCCC
Confidence            57899999999999999999999999999998877666555555 7874332212111    223679999988875

>PRK08339 short chain dehydrogenase; Provisional

Probab=96.79  E-value=0.0096  Score=52.92  Aligned_cols=75  Identities=15%  Similarity=0.139  Sum_probs=53.7

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc----CCc---EEEcCCChhHHHHh----h--CCc
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL----GAD---QYLVSSDATRMQEA----A--DSL  245 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~----g~~---~vv~~~~~~~~~~~----~--~~~  245 (357)
                      +++++||+|+ +++|.++++.+...|++|++++++.++.+.+.+++    +.+   ...|..+++.++++    .  +++
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~i   86 (263)
T PRK08339          7 SGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIGEP   86 (263)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhCCC
Confidence            5788999987 99999999999999999999999877765554432    322   22455554433332    2  369


Q ss_pred             cEEEEcCCC
Q 018382          246 DYIIDTVPA  254 (357)
Q Consensus       246 d~v~d~~g~  254 (357)
                      |++++++|.
T Consensus        87 D~lv~nag~   95 (263)
T PRK08339         87 DIFFFSTGG   95 (263)
T ss_pred             cEEEECCCC
Confidence            999999875

>PRK07063 short chain dehydrogenase; Provisional

Probab=96.78  E-value=0.0078  Score=53.27  Aligned_cols=75  Identities=19%  Similarity=0.178  Sum_probs=53.4

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc-----CCc---EEEcCCChhHHHHh-------hC
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL-----GAD---QYLVSSDATRMQEA-------AD  243 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~-----g~~---~vv~~~~~~~~~~~-------~~  243 (357)
                      .++++||+|+ |++|.++++.+...|++|+++++++++.+.+.+++     +..   ...|..+++.+++.       .+
T Consensus         6 ~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   85 (260)
T PRK07063          6 AGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAFG   85 (260)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            4688999987 99999999999899999999999887766554433     211   12355554433322       13


Q ss_pred             CccEEEEcCCC
Q 018382          244 SLDYIIDTVPA  254 (357)
Q Consensus       244 ~~d~v~d~~g~  254 (357)
                      ++|++++++|.
T Consensus        86 ~id~li~~ag~   96 (260)
T PRK07063         86 PLDVLVNNAGI   96 (260)
T ss_pred             CCcEEEECCCc
Confidence            79999999884

>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit

Probab=96.78  E-value=0.019  Score=44.20  Aligned_cols=95  Identities=15%  Similarity=0.182  Sum_probs=63.1

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcC-CeEEEEeCCcHHHHHHHH---hcCCc--EEEcCCChhHHHHhhCCccEEEEcC
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMG-HHVTVISSSDKKRVEAME---HLGAD--QYLVSSDATRMQEAADSLDYIIDTV  252 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g-~~V~~~~~~~~~~~~~~~---~~g~~--~vv~~~~~~~~~~~~~~~d~v~d~~  252 (357)
                      .++++|+-+|+|. |..+..+++..+ .+|+.++.++...+.+++   .++..  .++..+...........+|+|+...
T Consensus        18 ~~~~~vldlG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~   96 (124)
T TIGR02469        18 RPGDVLWDIGAGS-GSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEGDAPEALEDSLPEPDRVFIGG   96 (124)
T ss_pred             CCCCEEEEeCCCC-CHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEeccccccChhhcCCCCEEEECC
Confidence            6678899999866 888888888765 599999998887666543   24432  2222221111222335899998754


Q ss_pred             CCC---CChHHHHhccccCCeEEEE
Q 018382          253 PAN---HPLEPYLSLLKLDGKLILT  274 (357)
Q Consensus       253 g~~---~~~~~~~~~l~~~G~~v~~  274 (357)
                      +..   ..++.+.+.|+++|.++..
T Consensus        97 ~~~~~~~~l~~~~~~Lk~gG~li~~  121 (124)
T TIGR02469        97 SGGLLQEILEAIWRRLRPGGRIVLN  121 (124)
T ss_pred             cchhHHHHHHHHHHHcCCCCEEEEE
Confidence            332   2567788999999998864

This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=96.76  E-value=0.017  Score=51.44  Aligned_cols=102  Identities=13%  Similarity=0.182  Sum_probs=66.2

Q ss_pred             hhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCc
Q 018382          167 TVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSL  245 (357)
Q Consensus       167 ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~  245 (357)
                      ....+|...+. ..+++++|+|+|+.+.+++..+...|+ +|+++.|+.++.+.+.+.++...    .  ...  ....+
T Consensus       109 Gf~~~L~~~~~-~~~~~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~~~~----~--~~~--~~~~~  179 (272)
T PRK12550        109 AIAKLLASYQV-PPDLVVALRGSGGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYGYEW----R--PDL--GGIEA  179 (272)
T ss_pred             HHHHHHHhcCC-CCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhCCcc----h--hhc--ccccC
Confidence            33445544443 456789999999999999999999998 79999999998887777565221    0  001  12358


Q ss_pred             cEEEEcCCCCCC-------hHHHHhccccCCeEEEEccC
Q 018382          246 DYIIDTVPANHP-------LEPYLSLLKLDGKLILTGVI  277 (357)
Q Consensus       246 d~v~d~~g~~~~-------~~~~~~~l~~~G~~v~~g~~  277 (357)
                      |+|++|+.-...       .......+++...++++-..
T Consensus       180 dlvINaTp~Gm~~~~~~~~~pi~~~~l~~~~~v~D~vY~  218 (272)
T PRK12550        180 DILVNVTPIGMAGGPEADKLAFPEAEIDAASVVFDVVAL  218 (272)
T ss_pred             CEEEECCccccCCCCccccCCCCHHHcCCCCEEEEeecC
Confidence            999999864310       01123346666666665443

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=96.76  E-value=0.01  Score=53.23  Aligned_cols=76  Identities=14%  Similarity=0.212  Sum_probs=52.8

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcC----CcEEEcCCChhHHHHhhCCccEEEEcCC
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLG----ADQYLVSSDATRMQEAADSLDYIIDTVP  253 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g----~~~vv~~~~~~~~~~~~~~~d~v~d~~g  253 (357)
                      ..+++++|+|+|+.+.+++..+...|+ +++++.|+.++.+.+.+.+.    ...+. ..+..........+|+|+|++.
T Consensus       125 ~~~k~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~~-~~~~~~~~~~~~~~divINaTp  203 (283)
T PRK14027        125 AKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVV-GVDARGIEDVIAAADGVVNATP  203 (283)
T ss_pred             cCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhccCcceEE-ecCHhHHHHHHhhcCEEEEcCC
Confidence            347899999999999999988888998 89999999888877766443    21111 1111111222346999999876


Q ss_pred             CC
Q 018382          254 AN  255 (357)
Q Consensus       254 ~~  255 (357)
                      -.
T Consensus       204 ~G  205 (283)
T PRK14027        204 MG  205 (283)
T ss_pred             CC
Confidence            43

>PRK07062 short chain dehydrogenase; Provisional

Probab=96.76  E-value=0.0082  Score=53.27  Aligned_cols=75  Identities=15%  Similarity=0.213  Sum_probs=53.2

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc----CC-c---EEEcCCChhHHHH----hh---C
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL----GA-D---QYLVSSDATRMQE----AA---D  243 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~----g~-~---~vv~~~~~~~~~~----~~---~  243 (357)
                      .++++||+|+ +++|.+.++.+...|++|+++++++++.+...+.+    +. .   ...|..+.+.+.+    +.   +
T Consensus         7 ~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   86 (265)
T PRK07062          7 EGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARFG   86 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            4788999987 99999999999999999999999887655443322    21 1   1235555543332    22   3


Q ss_pred             CccEEEEcCCC
Q 018382          244 SLDYIIDTVPA  254 (357)
Q Consensus       244 ~~d~v~d~~g~  254 (357)
                      ++|++++++|.
T Consensus        87 ~id~li~~Ag~   97 (265)
T PRK07062         87 GVDMLVNNAGQ   97 (265)
T ss_pred             CCCEEEECCCC
Confidence            68999999985

>PRK09291 short chain dehydrogenase; Provisional

Probab=96.75  E-value=0.01  Score=52.33  Aligned_cols=74  Identities=20%  Similarity=0.140  Sum_probs=53.4

Q ss_pred             CCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCCc---EEEcCCChhHHHHhh-CCccEEEEcC
Q 018382          181 GLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGAD---QYLVSSDATRMQEAA-DSLDYIIDTV  252 (357)
Q Consensus       181 ~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~~---~vv~~~~~~~~~~~~-~~~d~v~d~~  252 (357)
                      ++++||+|+ |++|..+++.+...|++|+++++++++...+.+.   .+..   ...|..+.+.+.... .++|++|.++
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~vi~~a   81 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVDVLLNNA   81 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCCEEEECC
Confidence            457999987 9999999999999999999999987655444331   2321   224666655555544 3899999998


Q ss_pred             CC
Q 018382          253 PA  254 (357)
Q Consensus       253 g~  254 (357)
                      |.
T Consensus        82 g~   83 (257)
T PRK09291         82 GI   83 (257)
T ss_pred             Cc
Confidence            74

>PRK05854 short chain dehydrogenase; Provisional

Probab=96.73  E-value=0.0078  Score=55.06  Aligned_cols=75  Identities=20%  Similarity=0.197  Sum_probs=52.9

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc----C-Cc---EEEcCCChhHHHHh-------hC
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL----G-AD---QYLVSSDATRMQEA-------AD  243 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~----g-~~---~vv~~~~~~~~~~~-------~~  243 (357)
                      .+++++|+|+ +++|.++++.+...|++|+++++++++.+.+.+++    + ..   ..+|..+.+.+++.       .+
T Consensus        13 ~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~~   92 (313)
T PRK05854         13 SGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEGR   92 (313)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhCC
Confidence            4688999987 99999999988888999999999887665443322    2 11   12466565443332       13


Q ss_pred             CccEEEEcCCC
Q 018382          244 SLDYIIDTVPA  254 (357)
Q Consensus       244 ~~d~v~d~~g~  254 (357)
                      .+|++++++|.
T Consensus        93 ~iD~li~nAG~  103 (313)
T PRK05854         93 PIHLLINNAGV  103 (313)
T ss_pred             CccEEEECCcc
Confidence            69999998874

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=96.73  E-value=0.012  Score=55.49  Aligned_cols=75  Identities=15%  Similarity=0.160  Sum_probs=54.6

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcC--C-cEEEcCCChhHHHHhhCCccEEEEcCCC
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLG--A-DQYLVSSDATRMQEAADSLDYIIDTVPA  254 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g--~-~~vv~~~~~~~~~~~~~~~d~v~d~~g~  254 (357)
                      .+++++|+|+ |++|.++++.+...|++|+++++++++.....+..+  . ....|..+.+.+.+..+++|++++++|.
T Consensus       177 ~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~~~v~~~l~~IDiLInnAGi  255 (406)
T PRK07424        177 KGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQEAALAELLEKVDILIINHGI  255 (406)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCHHHHHHHhCCCCEEEECCCc
Confidence            4789999987 999999999888889999999987665543322112  1 1224666666666666789999998875

>TIGR02992 ectoine_eutC ectoine utilization protein EutC

Probab=96.73  E-value=0.013  Score=53.85  Aligned_cols=94  Identities=16%  Similarity=0.180  Sum_probs=63.8

Q ss_pred             CCCCeEEEEecChHHHHHHHHHH-HcCC-eEEEEeCCcHHHHHHHHhc----CCcEEEcCCChhHHHHhhCCccEEEEcC
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAK-AMGH-HVTVISSSDKKRVEAMEHL----GADQYLVSSDATRMQEAADSLDYIIDTV  252 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~-~~g~-~V~~~~~~~~~~~~~~~~~----g~~~vv~~~~~~~~~~~~~~~d~v~d~~  252 (357)
                      +..++++|+|+|..|.+.+..+. ..+. +|++..++.++.+.+.+++    |.+ +....   .+++.....|+|+.|+
T Consensus       127 ~~~~~v~iiGaG~qA~~~~~al~~~~~i~~v~V~~R~~~~a~~~a~~~~~~~g~~-v~~~~---~~~~av~~aDiVvtaT  202 (326)
T TIGR02992       127 EDSSVVAIFGAGMQARLQLEALTLVRDIRSARIWARDSAKAEALALQLSSLLGID-VTAAT---DPRAAMSGADIIVTTT  202 (326)
T ss_pred             CCCcEEEEECCCHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhhcCce-EEEeC---CHHHHhccCCEEEEec
Confidence            45678999999999988877776 4676 7999999988877665544    432 22122   2334446899999998


Q ss_pred             CCCCChHHHHhccccCCeEEEEccC
Q 018382          253 PANHPLEPYLSLLKLDGKLILTGVI  277 (357)
Q Consensus       253 g~~~~~~~~~~~l~~~G~~v~~g~~  277 (357)
                      +....+- ..+.++++-.+..+|..
T Consensus       203 ~s~~p~i-~~~~l~~g~~i~~vg~~  226 (326)
T TIGR02992       203 PSETPIL-HAEWLEPGQHVTAMGSD  226 (326)
T ss_pred             CCCCcEe-cHHHcCCCcEEEeeCCC
Confidence            8753321 22457787777777754

Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).

>PRK05867 short chain dehydrogenase; Provisional

Probab=96.73  E-value=0.0088  Score=52.70  Aligned_cols=75  Identities=16%  Similarity=0.190  Sum_probs=54.0

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc---CCc---EEEcCCChhHHHHh-------hCCc
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL---GAD---QYLVSSDATRMQEA-------ADSL  245 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~---g~~---~vv~~~~~~~~~~~-------~~~~  245 (357)
                      .++++||+|+ |++|.++++.+...|++|+++.++.++.+.+.+++   +.+   ...|..+++.++++       .+++
T Consensus         8 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   87 (253)
T PRK05867          8 HGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGGI   87 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            5789999987 99999999999999999999999887766554433   321   22455554433332       2479


Q ss_pred             cEEEEcCCC
Q 018382          246 DYIIDTVPA  254 (357)
Q Consensus       246 d~v~d~~g~  254 (357)
                      |++++++|.
T Consensus        88 d~lv~~ag~   96 (253)
T PRK05867         88 DIAVCNAGI   96 (253)
T ss_pred             CEEEECCCC
Confidence            999998874

>PRK07831 short chain dehydrogenase; Provisional

Probab=96.72  E-value=0.013  Score=51.95  Aligned_cols=76  Identities=16%  Similarity=0.227  Sum_probs=53.6

Q ss_pred             CCCCeEEEEec-C-hHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh----cCCcEE----EcCCChhHHHHhh------
Q 018382          179 QSGLRGGILGL-G-GVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH----LGADQY----LVSSDATRMQEAA------  242 (357)
Q Consensus       179 ~~~~~VlI~G~-g-~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~----~g~~~v----v~~~~~~~~~~~~------  242 (357)
                      .+++++||+|+ | ++|.++++.+...|++|+++++++++.+...+.    +|...+    .|..+.+.++++.      
T Consensus        15 ~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   94 (262)
T PRK07831         15 LAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVER   94 (262)
T ss_pred             cCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence            45789999986 6 799999999999999999999887765544332    443222    3555544333221      


Q ss_pred             -CCccEEEEcCCC
Q 018382          243 -DSLDYIIDTVPA  254 (357)
Q Consensus       243 -~~~d~v~d~~g~  254 (357)
                       +.+|++|+++|.
T Consensus        95 ~g~id~li~~ag~  107 (262)
T PRK07831         95 LGRLDVLVNNAGL  107 (262)
T ss_pred             cCCCCEEEECCCC
Confidence             378999999985

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.71  E-value=0.0098  Score=52.13  Aligned_cols=75  Identities=17%  Similarity=0.188  Sum_probs=53.8

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcC--C---cEEEcCCChhHHHHhh-------CCcc
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLG--A---DQYLVSSDATRMQEAA-------DSLD  246 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g--~---~~vv~~~~~~~~~~~~-------~~~d  246 (357)
                      +++++||+|+ |.+|..+++.+...|++|+++++++++.+.+...+.  .   -...|..+.+.+..+.       ..+|
T Consensus         4 ~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   83 (251)
T PRK07231          4 EGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSVD   83 (251)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence            4678999987 999999999988889999999999877665544333  1   1223555554443321       3689


Q ss_pred             EEEEcCCC
Q 018382          247 YIIDTVPA  254 (357)
Q Consensus       247 ~v~d~~g~  254 (357)
                      ++|.++|.
T Consensus        84 ~vi~~ag~   91 (251)
T PRK07231         84 ILVNNAGT   91 (251)
T ss_pred             EEEECCCC
Confidence            99999875

>PRK07576 short chain dehydrogenase; Provisional

Probab=96.70  E-value=0.0074  Score=53.64  Aligned_cols=76  Identities=20%  Similarity=0.201  Sum_probs=52.5

Q ss_pred             CCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc---CCc---EEEcCCChhHHHHh-------hCC
Q 018382          179 QSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL---GAD---QYLVSSDATRMQEA-------ADS  244 (357)
Q Consensus       179 ~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~---g~~---~vv~~~~~~~~~~~-------~~~  244 (357)
                      -+++++||+|+ |++|..+++.+...|++|+++++++++.....+.+   +..   ..+|..+.+.+.+.       .++
T Consensus         7 ~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~   86 (264)
T PRK07576          7 FAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGP   86 (264)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            35789999987 99999999999889999999998877654433222   322   12455554433332       136


Q ss_pred             ccEEEEcCCC
Q 018382          245 LDYIIDTVPA  254 (357)
Q Consensus       245 ~d~v~d~~g~  254 (357)
                      +|++|.++|.
T Consensus        87 iD~vi~~ag~   96 (264)
T PRK07576         87 IDVLVSGAAG   96 (264)
T ss_pred             CCEEEECCCC
Confidence            8999988763

>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed

Probab=96.69  E-value=0.0083  Score=60.46  Aligned_cols=75  Identities=17%  Similarity=0.167  Sum_probs=56.2

Q ss_pred             CCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcH---------------------HHHHHHHhcCCcEEEcCCC--hh
Q 018382          180 SGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDK---------------------KRVEAMEHLGADQYLVSSD--AT  236 (357)
Q Consensus       180 ~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~---------------------~~~~~~~~~g~~~vv~~~~--~~  236 (357)
                      .+++|+|+|+|+.|+.++..++..|.+|++..+.+.                     +.+++++ +|.+..++..-  .-
T Consensus       309 ~~kkVaIIG~GpaGl~aA~~L~~~G~~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~-~Gv~~~~~~~v~~~~  387 (639)
T PRK12809        309 RSEKVAVIGAGPAGLGCADILARAGVQVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTA-MGIDFHLNCEIGRDI  387 (639)
T ss_pred             CCCEEEEECcCHHHHHHHHHHHHcCCcEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHH-CCeEEEcCCccCCcC
Confidence            489999999999999999999999999999886652                     3445555 88776555432  11


Q ss_pred             HHHHhhCCccEEEEcCCCC
Q 018382          237 RMQEAADSLDYIIDTVPAN  255 (357)
Q Consensus       237 ~~~~~~~~~d~v~d~~g~~  255 (357)
                      .++.+..++|.||.++|..
T Consensus       388 ~~~~l~~~~DaV~latGa~  406 (639)
T PRK12809        388 TFSDLTSEYDAVFIGVGTY  406 (639)
T ss_pred             CHHHHHhcCCEEEEeCCCC
Confidence            2344556899999999875

>PRK07832 short chain dehydrogenase; Provisional

Probab=96.69  E-value=0.03  Score=49.92  Aligned_cols=72  Identities=19%  Similarity=0.263  Sum_probs=50.5

Q ss_pred             eEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCCc----EEEcCCChhHHHHh-------hCCccE
Q 018382          183 RGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGAD----QYLVSSDATRMQEA-------ADSLDY  247 (357)
Q Consensus       183 ~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~~----~vv~~~~~~~~~~~-------~~~~d~  247 (357)
                      +++|+|+ |++|..+++.+...|++|+++.+++++.+...++   .+..    ...|..+.+.+.+.       .+++|+
T Consensus         2 ~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   81 (272)
T PRK07832          2 RCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMDV   81 (272)
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence            6899987 9999999999988999999999887665444322   3322    23566665443322       136899


Q ss_pred             EEEcCCC
Q 018382          248 IIDTVPA  254 (357)
Q Consensus       248 v~d~~g~  254 (357)
                      +++++|.
T Consensus        82 lv~~ag~   88 (272)
T PRK07832         82 VMNIAGI   88 (272)
T ss_pred             EEECCCC
Confidence            9999975

>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=96.69  E-value=0.017  Score=52.69  Aligned_cols=95  Identities=22%  Similarity=0.290  Sum_probs=65.5

Q ss_pred             CCCCCeEEEEecChHHHHHHHHHHHcCC--eEEEEeCCcHHHHHHHH---hcCCcEEEcCCChhHHHHh--hCCccEEEE
Q 018382          178 KQSGLRGGILGLGGVGHMGVLIAKAMGH--HVTVISSSDKKRVEAME---HLGADQYLVSSDATRMQEA--ADSLDYIID  250 (357)
Q Consensus       178 ~~~~~~VlI~G~g~~G~~ai~la~~~g~--~V~~~~~~~~~~~~~~~---~~g~~~vv~~~~~~~~~~~--~~~~d~v~d  250 (357)
                      ++++++||.+|+| .|..++.+++..+.  +|++++.+++..+.+++   ..|.+.+..... +..+..  ...+|+|+.
T Consensus        78 i~~g~~VLDIG~G-tG~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~g-D~~~~~~~~~~fD~Ii~  155 (322)
T PRK13943         78 LDKGMRVLEIGGG-TGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVCG-DGYYGVPEFAPYDVIFV  155 (322)
T ss_pred             CCCCCEEEEEeCC-ccHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeC-ChhhcccccCCccEEEE
Confidence            3789999999997 59999999988764  69999998876555443   256543321111 111111  147999998


Q ss_pred             cCCCCCChHHHHhccccCCeEEEE
Q 018382          251 TVPANHPLEPYLSLLKLDGKLILT  274 (357)
Q Consensus       251 ~~g~~~~~~~~~~~l~~~G~~v~~  274 (357)
                      +.+.........+.++++|+++..
T Consensus       156 ~~g~~~ip~~~~~~LkpgG~Lvv~  179 (322)
T PRK13943        156 TVGVDEVPETWFTQLKEGGRVIVP  179 (322)
T ss_pred             CCchHHhHHHHHHhcCCCCEEEEE
Confidence            877654556788899999998763

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=96.68  E-value=0.029  Score=49.33  Aligned_cols=75  Identities=19%  Similarity=0.278  Sum_probs=52.8

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc---CCc---EEEcCCChhHHHHhh-------CCc
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL---GAD---QYLVSSDATRMQEAA-------DSL  245 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~---g~~---~vv~~~~~~~~~~~~-------~~~  245 (357)
                      +++++||+|+ |.+|...++.+...|.+|++++++.++.+.+...+   +..   ...|..+.+.+.+..       +++
T Consensus         3 ~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   82 (258)
T PRK12429          3 KGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGGV   82 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            4678999987 99999999988888999999999887665443322   322   233555554433321       379


Q ss_pred             cEEEEcCCC
Q 018382          246 DYIIDTVPA  254 (357)
Q Consensus       246 d~v~d~~g~  254 (357)
                      |++|.+++.
T Consensus        83 d~vi~~a~~   91 (258)
T PRK12429         83 DILVNNAGI   91 (258)
T ss_pred             CEEEECCCC
Confidence            999998874

>PRK05717 oxidoreductase; Validated

Probab=96.68  E-value=0.013  Score=51.65  Aligned_cols=76  Identities=17%  Similarity=0.216  Sum_probs=54.0

Q ss_pred             CCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCc---EEEcCCChhHHH----Hhh---CCccE
Q 018382          179 QSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGAD---QYLVSSDATRMQ----EAA---DSLDY  247 (357)
Q Consensus       179 ~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~----~~~---~~~d~  247 (357)
                      ..++++||+|+ |.+|..++..+...|++|+++++++++.....+.++..   ...|..+.+.+.    ++.   +.+|+
T Consensus         8 ~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~   87 (255)
T PRK05717          8 HNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLDA   87 (255)
T ss_pred             cCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            35788999987 99999999999888999999988876665555545532   224555544332    222   36899


Q ss_pred             EEEcCCC
Q 018382          248 IIDTVPA  254 (357)
Q Consensus       248 v~d~~g~  254 (357)
                      +|.++|.
T Consensus        88 li~~ag~   94 (255)
T PRK05717         88 LVCNAAI   94 (255)
T ss_pred             EEECCCc
Confidence            9999875

>PRK06180 short chain dehydrogenase; Provisional

Probab=96.67  E-value=0.011  Score=52.88  Aligned_cols=76  Identities=20%  Similarity=0.184  Sum_probs=54.8

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCc---EEEcCCChhHHHHhh-------CCccEE
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGAD---QYLVSSDATRMQEAA-------DSLDYI  248 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~~~-------~~~d~v  248 (357)
                      .++++||+|+ |++|.++++.+...|++|++++++.++.+.+.+..+..   ...|..+.+.+.+..       +++|++
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~v   82 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDVL   82 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            3567999987 99999999999888999999999888776665533321   123555554433321       368999


Q ss_pred             EEcCCCC
Q 018382          249 IDTVPAN  255 (357)
Q Consensus       249 ~d~~g~~  255 (357)
                      ++++|..
T Consensus        83 v~~ag~~   89 (277)
T PRK06180         83 VNNAGYG   89 (277)
T ss_pred             EECCCcc
Confidence            9998863

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=96.66  E-value=0.011  Score=52.07  Aligned_cols=75  Identities=20%  Similarity=0.248  Sum_probs=53.0

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc---CCc-E--EEcCCChhHHHHhh-------CCc
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL---GAD-Q--YLVSSDATRMQEAA-------DSL  245 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~---g~~-~--vv~~~~~~~~~~~~-------~~~  245 (357)
                      .++++||+|+ |.+|.++++.+...|++|+++.+++++.+.+.+.+   |.. .  ..|..+.+.++++.       +.+
T Consensus         9 ~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   88 (255)
T PRK07523          9 TGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGPI   88 (255)
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            5789999987 99999999988888999999999877655443322   321 1  23555544433322       368


Q ss_pred             cEEEEcCCC
Q 018382          246 DYIIDTVPA  254 (357)
Q Consensus       246 d~v~d~~g~  254 (357)
                      |++|.++|.
T Consensus        89 d~li~~ag~   97 (255)
T PRK07523         89 DILVNNAGM   97 (255)
T ss_pred             CEEEECCCC
Confidence            999999875

>PRK06949 short chain dehydrogenase; Provisional

Probab=96.65  E-value=0.011  Score=52.17  Aligned_cols=76  Identities=20%  Similarity=0.265  Sum_probs=54.0

Q ss_pred             CCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc---C-CcE--EEcCCChhHHHHh-------hCC
Q 018382          179 QSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL---G-ADQ--YLVSSDATRMQEA-------ADS  244 (357)
Q Consensus       179 ~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~---g-~~~--vv~~~~~~~~~~~-------~~~  244 (357)
                      ..++++||+|+ |.+|.+++..+...|++|+++.+++++.+.+...+   + ..+  ..|..+.+.+++.       .+.
T Consensus         7 ~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   86 (258)
T PRK06949          7 LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAGT   86 (258)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence            35789999987 99999999999989999999999888766554422   2 112  2344444433332       236


Q ss_pred             ccEEEEcCCC
Q 018382          245 LDYIIDTVPA  254 (357)
Q Consensus       245 ~d~v~d~~g~  254 (357)
                      +|++++++|.
T Consensus        87 ~d~li~~ag~   96 (258)
T PRK06949         87 IDILVNNSGV   96 (258)
T ss_pred             CCEEEECCCC
Confidence            8999999884

>PRK07340 ornithine cyclodeaminase; Validated

Probab=96.65  E-value=0.019  Score=52.21  Aligned_cols=100  Identities=11%  Similarity=0.083  Sum_probs=69.5

Q ss_pred             hccCCCCCCCeEEEEecChHHHHHHHHHHH-cCC-eEEEEeCCcHHHHHHHHhcCCc--EEEcCCChhHHHHhhCCccEE
Q 018382          173 SHFGLKQSGLRGGILGLGGVGHMGVLIAKA-MGH-HVTVISSSDKKRVEAMEHLGAD--QYLVSSDATRMQEAADSLDYI  248 (357)
Q Consensus       173 ~~~~~~~~~~~VlI~G~g~~G~~ai~la~~-~g~-~V~~~~~~~~~~~~~~~~~g~~--~vv~~~~~~~~~~~~~~~d~v  248 (357)
                      ...+. ....+++|+|+|..|.+.+..+.. .+. +|.+..++.++.+.+.+++...  .+. .   +..++....+|+|
T Consensus       118 ~~La~-~~~~~v~IiGaG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~-~---~~~~~av~~aDiV  192 (304)
T PRK07340        118 RTLAP-APPGDLLLIGTGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAE-P---LDGEAIPEAVDLV  192 (304)
T ss_pred             HHhCC-CCCCEEEEECCcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeE-E---CCHHHHhhcCCEE
Confidence            44444 566789999999999998888864 566 7889999988877776656421  111 1   1233444689999


Q ss_pred             EEcCCCCCChHHHHhccccCCeEEEEccCCC
Q 018382          249 IDTVPANHPLEPYLSLLKLDGKLILTGVINT  279 (357)
Q Consensus       249 ~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~  279 (357)
                      +.|+.+...+-..  .++++-.+..+|....
T Consensus       193 itaT~s~~Pl~~~--~~~~g~hi~~iGs~~p  221 (304)
T PRK07340        193 VTATTSRTPVYPE--AARAGRLVVAVGAFTP  221 (304)
T ss_pred             EEccCCCCceeCc--cCCCCCEEEecCCCCC
Confidence            9998886544333  3788888888887543

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=96.65  E-value=0.0097  Score=54.59  Aligned_cols=74  Identities=22%  Similarity=0.211  Sum_probs=53.2

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCC---c-E--EEcCCChhHHHHhh-------CCc
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGA---D-Q--YLVSSDATRMQEAA-------DSL  245 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~---~-~--vv~~~~~~~~~~~~-------~~~  245 (357)
                      +++++||+|+ |++|..+++.+...|++|+++++++++.+.+.+.+..   . .  ..|..+.+.+++..       ..+
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   84 (322)
T PRK07453          5 AKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKPL   84 (322)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCCc
Confidence            5678999987 9999999998888899999999988876665554421   1 1  23555544333321       259


Q ss_pred             cEEEEcCC
Q 018382          246 DYIIDTVP  253 (357)
Q Consensus       246 d~v~d~~g  253 (357)
                      |++|+++|
T Consensus        85 D~li~nAg   92 (322)
T PRK07453         85 DALVCNAA   92 (322)
T ss_pred             cEEEECCc
Confidence            99999987

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.64  E-value=0.015  Score=51.03  Aligned_cols=75  Identities=20%  Similarity=0.207  Sum_probs=52.5

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCCc---EEEcCCChhHHHH----hh---CCc
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGAD---QYLVSSDATRMQE----AA---DSL  245 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~~---~vv~~~~~~~~~~----~~---~~~  245 (357)
                      +++++||+|+ |++|..+++.+...|++|+++++++++.+.+.+.   .+..   ..+|..+.+.+++    +.   +++
T Consensus         4 ~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   83 (253)
T PRK08217          4 KDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQL   83 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999987 9999999999988999999999987765544332   3432   2345444433322    22   368


Q ss_pred             cEEEEcCCC
Q 018382          246 DYIIDTVPA  254 (357)
Q Consensus       246 d~v~d~~g~  254 (357)
                      |++|.++|.
T Consensus        84 d~vi~~ag~   92 (253)
T PRK08217         84 NGLINNAGI   92 (253)
T ss_pred             CEEEECCCc
Confidence            999999874

>PRK05876 short chain dehydrogenase; Provisional

Probab=96.64  E-value=0.011  Score=52.98  Aligned_cols=75  Identities=17%  Similarity=0.155  Sum_probs=53.2

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc---CCcE---EEcCCChhHHHHh-------hCCc
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL---GADQ---YLVSSDATRMQEA-------ADSL  245 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~---g~~~---vv~~~~~~~~~~~-------~~~~  245 (357)
                      .++++||+|+ |++|.++++.+...|++|+++++++++.+.+.+.+   |.+.   ..|..+.+.+.++       .+.+
T Consensus         5 ~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   84 (275)
T PRK05876          5 PGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGHV   84 (275)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            4678999987 99999999999889999999998877665544322   3221   2355555443332       2368


Q ss_pred             cEEEEcCCC
Q 018382          246 DYIIDTVPA  254 (357)
Q Consensus       246 d~v~d~~g~  254 (357)
                      |++|+++|.
T Consensus        85 d~li~nAg~   93 (275)
T PRK05876         85 DVVFSNAGI   93 (275)
T ss_pred             CEEEECCCc
Confidence            999999874

>PRK06194 hypothetical protein; Provisional

Probab=96.64  E-value=0.013  Score=52.71  Aligned_cols=76  Identities=21%  Similarity=0.278  Sum_probs=52.8

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc---CCcE---EEcCCChhHHHHhh-------CCc
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL---GADQ---YLVSSDATRMQEAA-------DSL  245 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~---g~~~---vv~~~~~~~~~~~~-------~~~  245 (357)
                      .++++||+|+ |++|..+++.+...|++|++++++.++.+...+.+   +...   ..|..+.+.++++.       +++
T Consensus         5 ~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~i   84 (287)
T PRK06194          5 AGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGAV   84 (287)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            3578999987 99999999988888999999998876655443322   3221   23555544443332       368


Q ss_pred             cEEEEcCCCC
Q 018382          246 DYIIDTVPAN  255 (357)
Q Consensus       246 d~v~d~~g~~  255 (357)
                      |++|+++|..
T Consensus        85 d~vi~~Ag~~   94 (287)
T PRK06194         85 HLLFNNAGVG   94 (287)
T ss_pred             CEEEECCCCC
Confidence            9999998863

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=96.63  E-value=0.026  Score=47.93  Aligned_cols=82  Identities=18%  Similarity=0.133  Sum_probs=57.2

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCCCh
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPL  258 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~~  258 (357)
                      -.|++++|+|.|.+|..+++.+...|++|++++++.++.+.+.+.+|+.. ++..  +.   ....+|+++-|+......
T Consensus        26 l~gk~v~I~G~G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~g~~~-v~~~--~l---~~~~~Dv~vp~A~~~~I~   99 (200)
T cd01075          26 LEGKTVAVQGLGKVGYKLAEHLLEEGAKLIVADINEEAVARAAELFGATV-VAPE--EI---YSVDADVFAPCALGGVIN   99 (200)
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCEE-Ecch--hh---ccccCCEEEecccccccC
Confidence            36789999999999999999999999999999998888877777567543 3321  11   112577777665444233


Q ss_pred             HHHHhccc
Q 018382          259 EPYLSLLK  266 (357)
Q Consensus       259 ~~~~~~l~  266 (357)
                      ...++.++
T Consensus       100 ~~~~~~l~  107 (200)
T cd01075         100 DDTIPQLK  107 (200)
T ss_pred             HHHHHHcC
Confidence            44445554

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PRK07478 short chain dehydrogenase; Provisional

Probab=96.63  E-value=0.011  Score=52.06  Aligned_cols=75  Identities=16%  Similarity=0.197  Sum_probs=53.3

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc---CCcE---EEcCCChhHHHHh----h---CCc
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL---GADQ---YLVSSDATRMQEA----A---DSL  245 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~---g~~~---vv~~~~~~~~~~~----~---~~~  245 (357)
                      +++++||+|+ |++|.++++.+...|++|+++++++++.+.+.+++   +.+.   ..|..+++.++++    .   +.+
T Consensus         5 ~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   84 (254)
T PRK07478          5 NGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGGL   84 (254)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence            4678999987 99999999998889999999999887766554432   3221   2355554433322    1   379


Q ss_pred             cEEEEcCCC
Q 018382          246 DYIIDTVPA  254 (357)
Q Consensus       246 d~v~d~~g~  254 (357)
                      |+++.++|.
T Consensus        85 d~li~~ag~   93 (254)
T PRK07478         85 DIAFNNAGT   93 (254)
T ss_pred             CEEEECCCC
Confidence            999999875

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.63  E-value=0.014  Score=52.15  Aligned_cols=75  Identities=19%  Similarity=0.248  Sum_probs=51.3

Q ss_pred             CCCeEEEEecC---hHHHHHHHHHHHcCCeEEEEeCCcHH---HHHHHHhcCCcE--EEcCCChhHHHHh----h---CC
Q 018382          180 SGLRGGILGLG---GVGHMGVLIAKAMGHHVTVISSSDKK---RVEAMEHLGADQ--YLVSSDATRMQEA----A---DS  244 (357)
Q Consensus       180 ~~~~VlI~G~g---~~G~~ai~la~~~g~~V~~~~~~~~~---~~~~~~~~g~~~--vv~~~~~~~~~~~----~---~~  244 (357)
                      +++++||+|++   ++|.++++.+...|++|+++.+++..   .+.+.++.|...  ..|..+.+.++++    .   +.
T Consensus         6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   85 (271)
T PRK06505          6 QGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWGK   85 (271)
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhCC
Confidence            56889999874   89999999998899999998876532   233333355332  2455555433332    2   37


Q ss_pred             ccEEEEcCCC
Q 018382          245 LDYIIDTVPA  254 (357)
Q Consensus       245 ~d~v~d~~g~  254 (357)
                      +|++++++|.
T Consensus        86 iD~lVnnAG~   95 (271)
T PRK06505         86 LDFVVHAIGF   95 (271)
T ss_pred             CCEEEECCcc
Confidence            9999999874

>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional

Probab=96.62  E-value=0.0069  Score=56.90  Aligned_cols=112  Identities=20%  Similarity=0.157  Sum_probs=72.1

Q ss_pred             ccchhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHH
Q 018382          161 LLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQE  240 (357)
Q Consensus       161 ~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~  240 (357)
                      +..+-...+..+.....++++++||.+|+| .|..++.+++..|++|++++.+++..+.+++...... +.....+ ...
T Consensus       148 L~~Aq~~k~~~l~~~l~l~~g~rVLDIGcG-~G~~a~~la~~~g~~V~giDlS~~~l~~A~~~~~~l~-v~~~~~D-~~~  224 (383)
T PRK11705        148 LEEAQEAKLDLICRKLQLKPGMRVLDIGCG-WGGLARYAAEHYGVSVVGVTISAEQQKLAQERCAGLP-VEIRLQD-YRD  224 (383)
T ss_pred             HHHHHHHHHHHHHHHhCCCCCCEEEEeCCC-ccHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccCe-EEEEECc-hhh
Confidence            333334444444333444899999999985 5677788888889999999999998888877442111 1111111 122


Q ss_pred             hhCCccEEEEc-----CCCC---CChHHHHhccccCCeEEEEc
Q 018382          241 AADSLDYIIDT-----VPAN---HPLEPYLSLLKLDGKLILTG  275 (357)
Q Consensus       241 ~~~~~d~v~d~-----~g~~---~~~~~~~~~l~~~G~~v~~g  275 (357)
                      +.+.+|.|+..     ++..   ..++.+.+.|+|+|.++...
T Consensus       225 l~~~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpGG~lvl~~  267 (383)
T PRK11705        225 LNGQFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPDGLFLLHT  267 (383)
T ss_pred             cCCCCCEEEEeCchhhCChHHHHHHHHHHHHHcCCCcEEEEEE
Confidence            34579988743     3331   24677888999999988753

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.62  E-value=0.023  Score=50.90  Aligned_cols=86  Identities=15%  Similarity=0.221  Sum_probs=61.4

Q ss_pred             hhhhccCCCCCCCeEEEEecCh-HHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEE
Q 018382          170 SPLSHFGLKQSGLRGGILGLGG-VGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYI  248 (357)
Q Consensus       170 ~~l~~~~~~~~~~~VlI~G~g~-~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v  248 (357)
                      ..|+..+.--.|++|+|+|.|+ +|..++.++...|++|++..+.   ...                  +.+....+|+|
T Consensus       148 ~~L~~~~i~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~---t~~------------------L~~~~~~aDIv  206 (283)
T PRK14192        148 RLLKAYNIELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSR---TQN------------------LPELVKQADII  206 (283)
T ss_pred             HHHHHcCCCCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCC---chh------------------HHHHhccCCEE
Confidence            3444444446789999999976 9999999999999988776652   111                  12223578999


Q ss_pred             EEcCCCCCChHHHHhccccCCeEEEEccCC
Q 018382          249 IDTVPANHPLEPYLSLLKLDGKLILTGVIN  278 (357)
Q Consensus       249 ~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~  278 (357)
                      ++++|.+..+  ..+.++++-.+++++...
T Consensus       207 I~AtG~~~~v--~~~~lk~gavViDvg~n~  234 (283)
T PRK14192        207 VGAVGKPELI--KKDWIKQGAVVVDAGFHP  234 (283)
T ss_pred             EEccCCCCcC--CHHHcCCCCEEEEEEEee
Confidence            9999876433  346688888888887654

>PRK07326 short chain dehydrogenase; Provisional

Probab=96.62  E-value=0.012  Score=51.24  Aligned_cols=75  Identities=23%  Similarity=0.179  Sum_probs=52.7

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCC---cEE--EcCCChhHHHH----hh---CCcc
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGA---DQY--LVSSDATRMQE----AA---DSLD  246 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~---~~v--v~~~~~~~~~~----~~---~~~d  246 (357)
                      ++.+++|+|+ |.+|..+++.+...|++|+++++++++...+.+.+..   -+.  .|..+.+.+..    +.   .++|
T Consensus         5 ~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   84 (237)
T PRK07326          5 KGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGLD   84 (237)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            4688999987 9999999998888899999999988776655544431   122  24444433322    21   3799


Q ss_pred             EEEEcCCC
Q 018382          247 YIIDTVPA  254 (357)
Q Consensus       247 ~v~d~~g~  254 (357)
                      ++|++.|.
T Consensus        85 ~vi~~ag~   92 (237)
T PRK07326         85 VLIANAGV   92 (237)
T ss_pred             EEEECCCC
Confidence            99998875

>PRK08263 short chain dehydrogenase; Provisional

Probab=96.61  E-value=0.03  Score=50.00  Aligned_cols=75  Identities=19%  Similarity=0.145  Sum_probs=53.4

Q ss_pred             CCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCc-E--EEcCCChhHHHHh-------hCCccEEE
Q 018382          181 GLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGAD-Q--YLVSSDATRMQEA-------ADSLDYII  249 (357)
Q Consensus       181 ~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~-~--vv~~~~~~~~~~~-------~~~~d~v~  249 (357)
                      ++++||+|+ |++|..+++.+...|.+|++++++.++.+.+.+.++.. +  ..|..+.+.+.+.       .+++|+++
T Consensus         3 ~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi   82 (275)
T PRK08263          3 EKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIVV   82 (275)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            467999987 99999999988888999999999888776665544422 1  2344454333322       23789999


Q ss_pred             EcCCCC
Q 018382          250 DTVPAN  255 (357)
Q Consensus       250 d~~g~~  255 (357)
                      .++|..
T Consensus        83 ~~ag~~   88 (275)
T PRK08263         83 NNAGYG   88 (275)
T ss_pred             ECCCCc
Confidence            998864

>PLN02253 xanthoxin dehydrogenase

Probab=96.60  E-value=0.016  Score=51.89  Aligned_cols=75  Identities=17%  Similarity=0.221  Sum_probs=53.3

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCC--c---EEEcCCChhHHHHhh-------CCcc
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGA--D---QYLVSSDATRMQEAA-------DSLD  246 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~--~---~vv~~~~~~~~~~~~-------~~~d  246 (357)
                      .++++||+|+ |++|.++++.+...|++|++++++++..+.+.+.++.  .   ...|..+.+.+++..       +++|
T Consensus        17 ~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~id   96 (280)
T PLN02253         17 LGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTLD   96 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence            4678999987 9999999998888899999999877665555443432  1   124566654443322       3699


Q ss_pred             EEEEcCCC
Q 018382          247 YIIDTVPA  254 (357)
Q Consensus       247 ~v~d~~g~  254 (357)
                      ++++++|.
T Consensus        97 ~li~~Ag~  104 (280)
T PLN02253         97 IMVNNAGL  104 (280)
T ss_pred             EEEECCCc
Confidence            99999875

>PRK06484 short chain dehydrogenase; Validated

Probab=96.60  E-value=0.013  Score=57.65  Aligned_cols=76  Identities=20%  Similarity=0.309  Sum_probs=57.5

Q ss_pred             CCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCc---EEEcCCChhHHHHh----h---CCccE
Q 018382          179 QSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGAD---QYLVSSDATRMQEA----A---DSLDY  247 (357)
Q Consensus       179 ~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~~----~---~~~d~  247 (357)
                      .+++++||+|+ +++|.++++.+...|++|++++++.++.+.+.++++..   ..+|..+++.++++    .   +++|+
T Consensus         3 ~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~   82 (520)
T PRK06484          3 AQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDV   82 (520)
T ss_pred             CCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence            36789999987 99999999999999999999999988877776656643   23455555443332    2   36999


Q ss_pred             EEEcCCC
Q 018382          248 IIDTVPA  254 (357)
Q Consensus       248 v~d~~g~  254 (357)
                      +++++|.
T Consensus        83 li~nag~   89 (520)
T PRK06484         83 LVNNAGV   89 (520)
T ss_pred             EEECCCc
Confidence            9999875

>CHL00194 ycf39 Ycf39; Provisional

Probab=96.59  E-value=0.015  Score=53.19  Aligned_cols=71  Identities=21%  Similarity=0.140  Sum_probs=54.3

Q ss_pred             eEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEE-EcCCChhHHHHhhCCccEEEEcCCC
Q 018382          183 RGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQY-LVSSDATRMQEAADSLDYIIDTVPA  254 (357)
Q Consensus       183 ~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~v-v~~~~~~~~~~~~~~~d~v~d~~g~  254 (357)
                      +|||+|+ |.+|..+++.+...|.+|++++|+.++...+.. .+.+.+ .|..+++.+.+...++|+||.+++.
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~~-~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~~   74 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLKE-WGAELVYGDLSLPETLPPSFKGVTAIIDASTS   74 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHhh-cCCEEEECCCCCHHHHHHHHCCCCEEEECCCC
Confidence            6899987 999999999998889999999998765544433 465433 3556666677777789999998764

>PRK07890 short chain dehydrogenase; Provisional

Probab=96.59  E-value=0.011  Score=52.20  Aligned_cols=76  Identities=14%  Similarity=0.170  Sum_probs=53.8

Q ss_pred             CCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc---CCc---EEEcCCChhHHHHh-------hCC
Q 018382          179 QSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL---GAD---QYLVSSDATRMQEA-------ADS  244 (357)
Q Consensus       179 ~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~---g~~---~vv~~~~~~~~~~~-------~~~  244 (357)
                      -+++++||+|+ |++|...++.+...|++|+++++++++.+.+.+.+   +..   ...|..+.+.++..       .+.
T Consensus         3 l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   82 (258)
T PRK07890          3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGR   82 (258)
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCC
Confidence            35688999987 99999999999899999999999887665554433   321   23455554433322       136


Q ss_pred             ccEEEEcCCC
Q 018382          245 LDYIIDTVPA  254 (357)
Q Consensus       245 ~d~v~d~~g~  254 (357)
                      +|++|.++|.
T Consensus        83 ~d~vi~~ag~   92 (258)
T PRK07890         83 VDALVNNAFR   92 (258)
T ss_pred             ccEEEECCcc
Confidence            8999998875

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=96.59  E-value=0.018  Score=46.87  Aligned_cols=90  Identities=16%  Similarity=0.028  Sum_probs=57.4

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCCCh
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPL  258 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~~  258 (357)
                      -.|.+|+|+|+|.+|..-++.+...|++|++++.  +..+.+.+ ++... +..+.  +.+.-..++|+|+-+++.. ..
T Consensus        11 l~~~~vlVvGGG~va~rka~~Ll~~ga~V~VIsp--~~~~~l~~-l~~i~-~~~~~--~~~~dl~~a~lViaaT~d~-e~   83 (157)
T PRK06719         11 LHNKVVVIIGGGKIAYRKASGLKDTGAFVTVVSP--EICKEMKE-LPYIT-WKQKT--FSNDDIKDAHLIYAATNQH-AV   83 (157)
T ss_pred             cCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEcC--ccCHHHHh-ccCcE-EEecc--cChhcCCCceEEEECCCCH-HH
Confidence            3678999999999999999988889999998853  33344444 54222 11111  1112234799999998887 55


Q ss_pred             HHHHhccccCCeEEEEc
Q 018382          259 EPYLSLLKLDGKLILTG  275 (357)
Q Consensus       259 ~~~~~~l~~~G~~v~~g  275 (357)
                      +......+..+.++...
T Consensus        84 N~~i~~~a~~~~~vn~~  100 (157)
T PRK06719         84 NMMVKQAAHDFQWVNVV  100 (157)
T ss_pred             HHHHHHHHHHCCcEEEC
Confidence            55444444444455443

>PRK09186 flagellin modification protein A; Provisional

Probab=96.57  E-value=0.012  Score=51.85  Aligned_cols=74  Identities=20%  Similarity=0.144  Sum_probs=53.2

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc----CCc---E-EEcCCChhHHHHhh-------C
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL----GAD---Q-YLVSSDATRMQEAA-------D  243 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~----g~~---~-vv~~~~~~~~~~~~-------~  243 (357)
                      +++++||+|+ |++|.+++..+...|++|+++.++.++.+.+.+.+    +..   . ..|..+++.+.++.       +
T Consensus         3 ~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~   82 (256)
T PRK09186          3 KGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKYG   82 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence            5789999987 99999999999989999999998877765554333    221   1 33666654443332       2


Q ss_pred             CccEEEEcCC
Q 018382          244 SLDYIIDTVP  253 (357)
Q Consensus       244 ~~d~v~d~~g  253 (357)
                      ++|+++++++
T Consensus        83 ~id~vi~~A~   92 (256)
T PRK09186         83 KIDGAVNCAY   92 (256)
T ss_pred             CccEEEECCc
Confidence            5899999985

>PRK09242 tropinone reductase; Provisional

Probab=96.57  E-value=0.013  Score=51.73  Aligned_cols=75  Identities=17%  Similarity=0.207  Sum_probs=53.3

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc-----CCc---EEEcCCChhHHHH----h---hC
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL-----GAD---QYLVSSDATRMQE----A---AD  243 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~-----g~~---~vv~~~~~~~~~~----~---~~  243 (357)
                      .++++||+|+ |++|..+++.+...|++|+++++++++.+.+.+++     +.+   ...|..+.+.+++    +   .+
T Consensus         8 ~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   87 (257)
T PRK09242          8 DGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHWD   87 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            4789999987 99999999999999999999999887765554332     211   1235555433322    2   23


Q ss_pred             CccEEEEcCCC
Q 018382          244 SLDYIIDTVPA  254 (357)
Q Consensus       244 ~~d~v~d~~g~  254 (357)
                      ++|+++.++|.
T Consensus        88 ~id~li~~ag~   98 (257)
T PRK09242         88 GLHILVNNAGG   98 (257)
T ss_pred             CCCEEEECCCC
Confidence            79999999985

>PRK12828 short chain dehydrogenase; Provisional

Probab=96.56  E-value=0.012  Score=51.05  Aligned_cols=75  Identities=19%  Similarity=0.184  Sum_probs=51.1

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCCcE-EEcCCChhHHHH----h---hCCccE
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGADQ-YLVSSDATRMQE----A---ADSLDY  247 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~~~-vv~~~~~~~~~~----~---~~~~d~  247 (357)
                      +++++||+|+ |.+|..+++.+...|++|++++++.++.....+.   .+... ..|..+.+.+++    +   .+++|+
T Consensus         6 ~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   85 (239)
T PRK12828          6 QGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGRLDA   85 (239)
T ss_pred             CCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCCcCE
Confidence            4789999987 9999999999988899999999977654332221   23222 244444433322    2   237999


Q ss_pred             EEEcCCC
Q 018382          248 IIDTVPA  254 (357)
Q Consensus       248 v~d~~g~  254 (357)
                      ||.++|.
T Consensus        86 vi~~ag~   92 (239)
T PRK12828         86 LVNIAGA   92 (239)
T ss_pred             EEECCcc
Confidence            9998875

>PRK06141 ornithine cyclodeaminase; Validated

Probab=96.55  E-value=0.017  Score=52.86  Aligned_cols=99  Identities=20%  Similarity=0.154  Sum_probs=64.0

Q ss_pred             ccCCCCCCCeEEEEecChHHHHHHHHHHH-cCC-eEEEEeCCcHHHHHHHHhcCCc--EEEcCCChhHHHHhhCCccEEE
Q 018382          174 HFGLKQSGLRGGILGLGGVGHMGVLIAKA-MGH-HVTVISSSDKKRVEAMEHLGAD--QYLVSSDATRMQEAADSLDYII  249 (357)
Q Consensus       174 ~~~~~~~~~~VlI~G~g~~G~~ai~la~~-~g~-~V~~~~~~~~~~~~~~~~~g~~--~vv~~~~~~~~~~~~~~~d~v~  249 (357)
                      .+.+ ...++++|+|+|..|.+.+..+.. .+. +|++..++.++.+.+.+++...  .+....   ..++...+.|+|+
T Consensus       119 ~La~-~~~~~v~iiG~G~~a~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~g~~~~~~~---~~~~av~~aDIVi  194 (314)
T PRK06141        119 YLAR-KDASRLLVVGTGRLASLLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQGFDAEVVT---DLEAAVRQADIIS  194 (314)
T ss_pred             HhCC-CCCceEEEECCcHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEeC---CHHHHHhcCCEEE
Confidence            3444 567889999999999998865543 565 8999999988887776655321  111111   1233446899999


Q ss_pred             EcCCCCCChHHHHhccccCCeEEEEccC
Q 018382          250 DTVPANHPLEPYLSLLKLDGKLILTGVI  277 (357)
Q Consensus       250 d~~g~~~~~~~~~~~l~~~G~~v~~g~~  277 (357)
                      .+++....+- -.+.++++-.+..+|..
T Consensus       195 ~aT~s~~pvl-~~~~l~~g~~i~~ig~~  221 (314)
T PRK06141        195 CATLSTEPLV-RGEWLKPGTHLDLVGNF  221 (314)
T ss_pred             EeeCCCCCEe-cHHHcCCCCEEEeeCCC
Confidence            8887753321 12567777766566643

>PRK06128 oxidoreductase; Provisional

Probab=96.54  E-value=0.041  Score=49.92  Aligned_cols=75  Identities=15%  Similarity=0.209  Sum_probs=49.3

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHH--HHH---HHHhcCCcE---EEcCCChhHHHHh-------hC
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKK--RVE---AMEHLGADQ---YLVSSDATRMQEA-------AD  243 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~--~~~---~~~~~g~~~---vv~~~~~~~~~~~-------~~  243 (357)
                      .++++||+|+ |++|.+++..+...|++|+++.++++.  .+.   ..+..|...   ..|..+.+.++++       .+
T Consensus        54 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  133 (300)
T PRK06128         54 QGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKELG  133 (300)
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHhC
Confidence            4689999987 999999999998899999887764321  111   122245322   2355554433332       23


Q ss_pred             CccEEEEcCCC
Q 018382          244 SLDYIIDTVPA  254 (357)
Q Consensus       244 ~~d~v~d~~g~  254 (357)
                      ++|++|+++|.
T Consensus       134 ~iD~lV~nAg~  144 (300)
T PRK06128        134 GLDILVNIAGK  144 (300)
T ss_pred             CCCEEEECCcc
Confidence            79999999874

>PRK05884 short chain dehydrogenase; Provisional

Probab=96.54  E-value=0.018  Score=49.87  Aligned_cols=71  Identities=21%  Similarity=0.229  Sum_probs=52.5

Q ss_pred             eEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcE-EEcCCChhHHHHhh----CCccEEEEcCC
Q 018382          183 RGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQ-YLVSSDATRMQEAA----DSLDYIIDTVP  253 (357)
Q Consensus       183 ~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~----~~~d~v~d~~g  253 (357)
                      +++|+|+ |++|.+.++.+...|++|+++.+++++.+.+.+..+... ..|..+++.++++.    ..+|++++++|
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~~ag   78 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFPHHLDTIVNVPA   78 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHhhcCcEEEECCC
Confidence            5899987 999999999998889999999998887766655455432 24656655444332    36899999875

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=96.54  E-value=0.031  Score=48.47  Aligned_cols=103  Identities=17%  Similarity=0.174  Sum_probs=65.1

Q ss_pred             hhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCe---EEEEeCC----cHHH-------HHHHHhcCCcEEEcCCCh
Q 018382          170 SPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHH---VTVISSS----DKKR-------VEAMEHLGADQYLVSSDA  235 (357)
Q Consensus       170 ~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~---V~~~~~~----~~~~-------~~~~~~~g~~~vv~~~~~  235 (357)
                      .+++..+.--.+.+++|+|+|+.|.+++..+...|++   ++++.++    .++.       ..+.+.++... .+   .
T Consensus        14 ~al~~~g~~l~~~rvlvlGAGgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~-~~---~   89 (226)
T cd05311          14 NALKLVGKKIEEVKIVINGAGAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK-TG---G   89 (226)
T ss_pred             HHHHHhCCCccCCEEEEECchHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc-cc---C
Confidence            3444444324678999999999999999998888974   8898887    3432       22323243211 11   1


Q ss_pred             hHHHHhhCCccEEEEcCCCCCChHHHHhccccCCeEEEEccC
Q 018382          236 TRMQEAADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVI  277 (357)
Q Consensus       236 ~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~  277 (357)
                      + +.+...++|+++++++....-...++.|.++..+..+.++
T Consensus        90 ~-l~~~l~~~dvlIgaT~~G~~~~~~l~~m~~~~ivf~lsnP  130 (226)
T cd05311          90 T-LKEALKGADVFIGVSRPGVVKKEMIKKMAKDPIVFALANP  130 (226)
T ss_pred             C-HHHHHhcCCEEEeCCCCCCCCHHHHHhhCCCCEEEEeCCC
Confidence            2 2223346999999998542224667778787776666543

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>PRK07677 short chain dehydrogenase; Provisional

Probab=96.53  E-value=0.014  Score=51.40  Aligned_cols=74  Identities=16%  Similarity=0.132  Sum_probs=52.0

Q ss_pred             CCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc---CC-cEE--EcCCChhHHHHhh-------CCcc
Q 018382          181 GLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL---GA-DQY--LVSSDATRMQEAA-------DSLD  246 (357)
Q Consensus       181 ~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~---g~-~~v--v~~~~~~~~~~~~-------~~~d  246 (357)
                      ++++||+|+ |++|.+.++.+...|++|+++++++++.+.+.+.+   +. ...  .|..+++.+.+..       +++|
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRID   80 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence            468999987 99999999999999999999999877665544322   32 122  3555554433321       3689


Q ss_pred             EEEEcCCC
Q 018382          247 YIIDTVPA  254 (357)
Q Consensus       247 ~v~d~~g~  254 (357)
                      ++++++|.
T Consensus        81 ~lI~~ag~   88 (252)
T PRK07677         81 ALINNAAG   88 (252)
T ss_pred             EEEECCCC
Confidence            99999874

>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=96.52  E-value=0.025  Score=48.24  Aligned_cols=95  Identities=20%  Similarity=0.238  Sum_probs=62.4

Q ss_pred             CCCCCeEEEEecChHHHHHHHHHHHcC--CeEEEEeCCcHHHHHHHHh---cCCc---EEEcCCChhHHHHhhCCccEEE
Q 018382          178 KQSGLRGGILGLGGVGHMGVLIAKAMG--HHVTVISSSDKKRVEAMEH---LGAD---QYLVSSDATRMQEAADSLDYII  249 (357)
Q Consensus       178 ~~~~~~VlI~G~g~~G~~ai~la~~~g--~~V~~~~~~~~~~~~~~~~---~g~~---~vv~~~~~~~~~~~~~~~d~v~  249 (357)
                      ++++++||-+|+|. |..++.+++..+  .+|+.++.+++..+.+++.   .+..   .++..+..+... ....||.|+
T Consensus        70 ~~~~~~VLDiG~Gs-G~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~d~~~~~~-~~~~fD~Ii  147 (205)
T PRK13944         70 PRPGMKILEVGTGS-GYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHGDGKRGLE-KHAPFDAII  147 (205)
T ss_pred             CCCCCEEEEECcCc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEECCcccCCc-cCCCccEEE
Confidence            37889999998753 666777777664  5899999998866655543   3422   223222111111 124799998


Q ss_pred             EcCCCCCChHHHHhccccCCeEEEE
Q 018382          250 DTVPANHPLEPYLSLLKLDGKLILT  274 (357)
Q Consensus       250 d~~g~~~~~~~~~~~l~~~G~~v~~  274 (357)
                      -+.........+.+.|+++|+++..
T Consensus       148 ~~~~~~~~~~~l~~~L~~gG~lvi~  172 (205)
T PRK13944        148 VTAAASTIPSALVRQLKDGGVLVIP  172 (205)
T ss_pred             EccCcchhhHHHHHhcCcCcEEEEE
Confidence            7666543557788999999998764

>PRK06841 short chain dehydrogenase; Provisional

Probab=96.50  E-value=0.018  Score=50.72  Aligned_cols=74  Identities=22%  Similarity=0.263  Sum_probs=51.7

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCC----cEEEcCCChhHHHHh-------hCCccE
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGA----DQYLVSSDATRMQEA-------ADSLDY  247 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~----~~vv~~~~~~~~~~~-------~~~~d~  247 (357)
                      +++++||+|+ |++|..+++.+...|++|++++++++......+ ...    ....|..+.+.++..       ..++|+
T Consensus        14 ~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~   92 (255)
T PRK06841         14 SGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQ-LLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDI   92 (255)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-hhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            5689999987 999999999998899999999988765443333 321    122455554433322       136899


Q ss_pred             EEEcCCC
Q 018382          248 IIDTVPA  254 (357)
Q Consensus       248 v~d~~g~  254 (357)
                      ++.++|.
T Consensus        93 vi~~ag~   99 (255)
T PRK06841         93 LVNSAGV   99 (255)
T ss_pred             EEECCCC
Confidence            9999875

>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]

Probab=96.50  E-value=0.04  Score=47.01  Aligned_cols=118  Identities=18%  Similarity=0.075  Sum_probs=77.1

Q ss_pred             CCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCc-HHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCCCh
Q 018382          180 SGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSD-KKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPL  258 (357)
Q Consensus       180 ~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~-~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~~  258 (357)
                      .|++|||+|+|.+|.-=+.++...|++|++++... .+...+.+..+... +.   ..+......++++||-++++...-
T Consensus        11 ~~k~VlvvGgG~va~rKa~~ll~~ga~v~Vvs~~~~~el~~~~~~~~i~~-~~---~~~~~~~~~~~~lviaAt~d~~ln   86 (210)
T COG1648          11 EGKKVLVVGGGSVALRKARLLLKAGADVTVVSPEFEPELKALIEEGKIKW-IE---REFDAEDLDDAFLVIAATDDEELN   86 (210)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhcCCEEEEEcCCccHHHHHHHHhcCcch-hh---cccChhhhcCceEEEEeCCCHHHH
Confidence            67899999999999999999999999999998765 44444444233211 11   111112223499999999998555


Q ss_pred             HHHHhccccCCeEEEEccCCCCcccchHHHh-hccceEEEEeec
Q 018382          259 EPYLSLLKLDGKLILTGVINTPMQFLTPMVM-LGRKAITGSFIG  301 (357)
Q Consensus       259 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~i~g~~~~  301 (357)
                      +...+..+..+++|.....+...++.....+ .+.+.+.-+..+
T Consensus        87 ~~i~~~a~~~~i~vNv~D~p~~~~f~~Pa~~~r~~l~iaIsT~G  130 (210)
T COG1648          87 ERIAKAARERRILVNVVDDPELCDFIFPAIVDRGPLQIAISTGG  130 (210)
T ss_pred             HHHHHHHHHhCCceeccCCcccCceecceeeccCCeEEEEECCC
Confidence            6677788888999888766554454444432 334444444443

>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=96.49  E-value=0.022  Score=48.86  Aligned_cols=96  Identities=22%  Similarity=0.298  Sum_probs=63.1

Q ss_pred             CCCCCCeEEEEecChHHHHHHHHHHHcC--CeEEEEeCCcHHHHHHHHh---cCCcE--EEcCCChhHHHHhhCCccEEE
Q 018382          177 LKQSGLRGGILGLGGVGHMGVLIAKAMG--HHVTVISSSDKKRVEAMEH---LGADQ--YLVSSDATRMQEAADSLDYII  249 (357)
Q Consensus       177 ~~~~~~~VlI~G~g~~G~~ai~la~~~g--~~V~~~~~~~~~~~~~~~~---~g~~~--vv~~~~~~~~~~~~~~~d~v~  249 (357)
                      .++++++||-+|+|. |..++.+++..+  .+|+.+..+++-.+.+++.   .|..+  ++..+..... .-.+.||+|+
T Consensus        73 ~~~~g~~VLdIG~Gs-G~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~gd~~~~~-~~~~~fD~I~  150 (212)
T PRK13942         73 DLKEGMKVLEIGTGS-GYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVGDGTLGY-EENAPYDRIY  150 (212)
T ss_pred             CCCCcCEEEEECCcc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCC-CcCCCcCEEE
Confidence            348999999998753 666777777665  5899999998876665553   34322  2222211111 1124799997


Q ss_pred             EcCCCCCChHHHHhccccCCeEEEE
Q 018382          250 DTVPANHPLEPYLSLLKLDGKLILT  274 (357)
Q Consensus       250 d~~g~~~~~~~~~~~l~~~G~~v~~  274 (357)
                      -............+.|+++|+++..
T Consensus       151 ~~~~~~~~~~~l~~~LkpgG~lvi~  175 (212)
T PRK13942        151 VTAAGPDIPKPLIEQLKDGGIMVIP  175 (212)
T ss_pred             ECCCcccchHHHHHhhCCCcEEEEE
Confidence            6555444667888999999998775

>PRK07024 short chain dehydrogenase; Provisional

Probab=96.48  E-value=0.022  Score=50.31  Aligned_cols=74  Identities=16%  Similarity=0.104  Sum_probs=52.4

Q ss_pred             CCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCC----c-EEEcCCChhHHHHh-------hCCccE
Q 018382          181 GLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGA----D-QYLVSSDATRMQEA-------ADSLDY  247 (357)
Q Consensus       181 ~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~----~-~vv~~~~~~~~~~~-------~~~~d~  247 (357)
                      +.++||+|+ |++|.++++.+...|++|++++++.++.+.+.+.+..    . ..+|..+.+.+.+.       .+.+|+
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~   81 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPDV   81 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence            468999987 9999999999988899999999988776655553431    1 12355554443332       125899


Q ss_pred             EEEcCCC
Q 018382          248 IIDTVPA  254 (357)
Q Consensus       248 v~d~~g~  254 (357)
                      +++++|.
T Consensus        82 lv~~ag~   88 (257)
T PRK07024         82 VIANAGI   88 (257)
T ss_pred             EEECCCc
Confidence            9998874

>PRK06483 dihydromonapterin reductase; Provisional

Probab=96.48  E-value=0.02  Score=49.77  Aligned_cols=74  Identities=20%  Similarity=0.129  Sum_probs=50.7

Q ss_pred             CCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcE-EEcCCChhHHH----Hhh---CCccEEEEc
Q 018382          181 GLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQ-YLVSSDATRMQ----EAA---DSLDYIIDT  251 (357)
Q Consensus       181 ~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~----~~~---~~~d~v~d~  251 (357)
                      ++++||+|+ +++|.++++.+...|++|+++++++++.....+..|... ..|..+.+.++    ++.   +++|+++++
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~   81 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQAGAQCIQADFSTNAGIMAFIDELKQHTDGLRAIIHN   81 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEEEEC
Confidence            467999987 999999999998899999999987654433333355322 23554543332    222   369999998


Q ss_pred             CCC
Q 018382          252 VPA  254 (357)
Q Consensus       252 ~g~  254 (357)
                      +|.
T Consensus        82 ag~   84 (236)
T PRK06483         82 ASD   84 (236)
T ss_pred             Ccc
Confidence            874

>PRK04457 spermidine synthase; Provisional

Probab=96.46  E-value=0.045  Score=48.62  Aligned_cols=95  Identities=18%  Similarity=0.239  Sum_probs=65.1

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHc-CCeEEEEeCCcHHHHHHHHhcCC----c--EEEcCCChhHHHHhhCCccEEE-E
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAM-GHHVTVISSSDKKRVEAMEHLGA----D--QYLVSSDATRMQEAADSLDYII-D  250 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~-g~~V~~~~~~~~~~~~~~~~~g~----~--~vv~~~~~~~~~~~~~~~d~v~-d  250 (357)
                      .+.++||++|+|+ |..+..+++.. +.+|+++..+++-.+.+++.++.    .  .++..+..+++++....+|+|+ |
T Consensus        65 ~~~~~vL~IG~G~-G~l~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~rv~v~~~Da~~~l~~~~~~yD~I~~D  143 (262)
T PRK04457         65 PRPQHILQIGLGG-GSLAKFIYTYLPDTRQTAVEINPQVIAVARNHFELPENGERFEVIEADGAEYIAVHRHSTDVILVD  143 (262)
T ss_pred             CCCCEEEEECCCH-hHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHcCCCCCCCceEEEECCHHHHHHhCCCCCCEEEEe
Confidence            4567899999864 66777777766 45999999999988888886652    1  2333333345555556899996 3


Q ss_pred             cCCC---------CCChHHHHhccccCCeEEEE
Q 018382          251 TVPA---------NHPLEPYLSLLKLDGKLILT  274 (357)
Q Consensus       251 ~~g~---------~~~~~~~~~~l~~~G~~v~~  274 (357)
                      ....         ...+..+.+.|+++|.++..
T Consensus       144 ~~~~~~~~~~l~t~efl~~~~~~L~pgGvlvin  176 (262)
T PRK04457        144 GFDGEGIIDALCTQPFFDDCRNALSSDGIFVVN  176 (262)
T ss_pred             CCCCCCCccccCcHHHHHHHHHhcCCCcEEEEE
Confidence            3221         12456788899999998763

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=96.45  E-value=0.023  Score=53.19  Aligned_cols=96  Identities=21%  Similarity=0.281  Sum_probs=68.1

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCCC
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHP  257 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~  257 (357)
                      -.+.+|||+|+|-+|..++..+...|. +|++.-|+.++...+.+++|+..+ .   .+.+......+|+||.+++.+..
T Consensus       176 L~~~~vlvIGAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~~-~---l~el~~~l~~~DvVissTsa~~~  251 (414)
T COG0373         176 LKDKKVLVIGAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEAV-A---LEELLEALAEADVVISSTSAPHP  251 (414)
T ss_pred             cccCeEEEEcccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCeee-c---HHHHHHhhhhCCEEEEecCCCcc
Confidence            367899999999999999999999997 899999999999888888995433 1   12233344589999999888632


Q ss_pred             h---HHHHhccccC-C-eEEEEccCC
Q 018382          258 L---EPYLSLLKLD-G-KLILTGVIN  278 (357)
Q Consensus       258 ~---~~~~~~l~~~-G-~~v~~g~~~  278 (357)
                      .   ....+.+++. . .+++++.+.
T Consensus       252 ii~~~~ve~a~~~r~~~livDiavPR  277 (414)
T COG0373         252 IITREMVERALKIRKRLLIVDIAVPR  277 (414)
T ss_pred             ccCHHHHHHHHhcccCeEEEEecCCC
Confidence            2   1233333333 2 356676653

>PRK07774 short chain dehydrogenase; Provisional

Probab=96.44  E-value=0.018  Score=50.50  Aligned_cols=75  Identities=17%  Similarity=0.269  Sum_probs=52.1

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc---CCc---EEEcCCChhHHHHhh-------CCc
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL---GAD---QYLVSSDATRMQEAA-------DSL  245 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~---g~~---~vv~~~~~~~~~~~~-------~~~  245 (357)
                      .++++||+|+ |.+|..+++.+...|++|+++.+++++...+.+.+   +..   ...|..+.+.++.+.       +++
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   84 (250)
T PRK07774          5 DDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGGI   84 (250)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence            4678999987 99999999999888999999999876554443322   211   234555544333221       368


Q ss_pred             cEEEEcCCC
Q 018382          246 DYIIDTVPA  254 (357)
Q Consensus       246 d~v~d~~g~  254 (357)
                      |++|.++|.
T Consensus        85 d~vi~~ag~   93 (250)
T PRK07774         85 DYLVNNAAI   93 (250)
T ss_pred             CEEEECCCC
Confidence            999999884

>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4)

Probab=96.43  E-value=0.014  Score=52.09  Aligned_cols=96  Identities=26%  Similarity=0.272  Sum_probs=56.5

Q ss_pred             cCCCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCCc--EEEcCCChhHHHHhhCCccEEE
Q 018382          175 FGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGAD--QYLVSSDATRMQEAADSLDYII  249 (357)
Q Consensus       175 ~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~~--~vv~~~~~~~~~~~~~~~d~v~  249 (357)
                      ...+++|++||-+|+| -|-.++.+++..|++|+.++.+++..+.++++   .|..  ..+...+.   .++...||.|+
T Consensus        57 ~~~l~~G~~vLDiGcG-wG~~~~~~a~~~g~~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~~D~---~~~~~~fD~Iv  132 (273)
T PF02353_consen   57 KLGLKPGDRVLDIGCG-WGGLAIYAAERYGCHVTGITLSEEQAEYARERIREAGLEDRVEVRLQDY---RDLPGKFDRIV  132 (273)
T ss_dssp             TTT--TT-EEEEES-T-TSHHHHHHHHHH--EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEES-G---GG---S-SEEE
T ss_pred             HhCCCCCCEEEEeCCC-ccHHHHHHHHHcCcEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEeec---cccCCCCCEEE
Confidence            3345999999999987 46667788888899999999999887766542   3421  11222221   23334899876


Q ss_pred             E-----cCCCC---CChHHHHhccccCCeEEEE
Q 018382          250 D-----TVPAN---HPLEPYLSLLKLDGKLILT  274 (357)
Q Consensus       250 d-----~~g~~---~~~~~~~~~l~~~G~~v~~  274 (357)
                      .     .+|..   ..+..+.+.|+|+|+++.-
T Consensus       133 Si~~~Ehvg~~~~~~~f~~~~~~LkpgG~~~lq  165 (273)
T PF02353_consen  133 SIEMFEHVGRKNYPAFFRKISRLLKPGGRLVLQ  165 (273)
T ss_dssp             EESEGGGTCGGGHHHHHHHHHHHSETTEEEEEE
T ss_pred             EEechhhcChhHHHHHHHHHHHhcCCCcEEEEE
Confidence            4     44432   2356778899999998753

All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....

>PRK07502 cyclohexadienyl dehydrogenase; Validated

Probab=96.43  E-value=0.024  Score=51.73  Aligned_cols=90  Identities=22%  Similarity=0.275  Sum_probs=61.5

Q ss_pred             CeEEEEecChHHHHHHHHHHHcCC--eEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCCC--
Q 018382          182 LRGGILGLGGVGHMGVLIAKAMGH--HVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHP--  257 (357)
Q Consensus       182 ~~VlI~G~g~~G~~ai~la~~~g~--~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~--  257 (357)
                      .+|.|+|+|.+|.+++..++..|.  +|++.++++++.+.+++ .|....+.. +   ..+.....|+||.|+.....  
T Consensus         7 ~~I~IIG~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~-~g~~~~~~~-~---~~~~~~~aDvViiavp~~~~~~   81 (307)
T PRK07502          7 DRVALIGIGLIGSSLARAIRRLGLAGEIVGADRSAETRARARE-LGLGDRVTT-S---AAEAVKGADLVILCVPVGASGA   81 (307)
T ss_pred             cEEEEEeeCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHh-CCCCceecC-C---HHHHhcCCCEEEECCCHHHHHH
Confidence            579999999999999999888884  89999999888777766 775321111 1   12233578999999887521  


Q ss_pred             -hHHHHhccccCCeEEEEcc
Q 018382          258 -LEPYLSLLKLDGKLILTGV  276 (357)
Q Consensus       258 -~~~~~~~l~~~G~~v~~g~  276 (357)
                       +......++++..++.++.
T Consensus        82 v~~~l~~~l~~~~iv~dvgs  101 (307)
T PRK07502         82 VAAEIAPHLKPGAIVTDVGS  101 (307)
T ss_pred             HHHHHHhhCCCCCEEEeCcc
Confidence             2233345566666666654

>PRK08589 short chain dehydrogenase; Validated

Probab=96.43  E-value=0.019  Score=51.23  Aligned_cols=74  Identities=15%  Similarity=0.267  Sum_probs=50.9

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc---CCc---EEEcCCChhHHHH----hh---CCc
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL---GAD---QYLVSSDATRMQE----AA---DSL  245 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~---g~~---~vv~~~~~~~~~~----~~---~~~  245 (357)
                      +++++||+|+ +++|.+.++.+...|++|+++.++ ++.+.+.+++   +..   ..+|..+.+.+..    +.   +.+
T Consensus         5 ~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i   83 (272)
T PRK08589          5 ENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGRV   83 (272)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence            5789999987 999999999888889999999988 5444333222   321   2345555443332    22   368


Q ss_pred             cEEEEcCCC
Q 018382          246 DYIIDTVPA  254 (357)
Q Consensus       246 d~v~d~~g~  254 (357)
                      |++++++|.
T Consensus        84 d~li~~Ag~   92 (272)
T PRK08589         84 DVLFNNAGV   92 (272)
T ss_pred             CEEEECCCC
Confidence            999999875

>PRK08177 short chain dehydrogenase; Provisional

Probab=96.42  E-value=0.017  Score=49.94  Aligned_cols=72  Identities=17%  Similarity=0.139  Sum_probs=51.3

Q ss_pred             CeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCc--EEEcCCChhHHHHh----h-CCccEEEEcCC
Q 018382          182 LRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGAD--QYLVSSDATRMQEA----A-DSLDYIIDTVP  253 (357)
Q Consensus       182 ~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~--~vv~~~~~~~~~~~----~-~~~d~v~d~~g  253 (357)
                      ++|+|+|+ |++|.+.++.+...|++|+++++++++.+.+.+ ++..  ..+|..+.+.++++    . +++|++|.++|
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~ag   80 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQA-LPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVNAG   80 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHh-ccccceEEcCCCCHHHHHHHHHHhhcCCCCEEEEcCc
Confidence            46899987 999999998888889999999998877665554 4322  22455555443333    2 26999999876


Q ss_pred             C
Q 018382          254 A  254 (357)
Q Consensus       254 ~  254 (357)
                      .
T Consensus        81 ~   81 (225)
T PRK08177         81 I   81 (225)
T ss_pred             c
Confidence            5

>COG3288 PntA NAD/NADP transhydrogenase alpha subunit [Energy production and conversion]

Probab=96.42  E-value=0.018  Score=50.96  Aligned_cols=126  Identities=17%  Similarity=0.107  Sum_probs=83.5

Q ss_pred             cCCCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCC-----------hhH------
Q 018382          175 FGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSD-----------ATR------  237 (357)
Q Consensus       175 ~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~-----------~~~------  237 (357)
                      ++.-.+...+|+.|.|..|++++..++..|+-|....-...+.++.+. +|+...-....           +++      
T Consensus       158 Aagtv~pA~vlv~G~Gvagl~aiata~~lG~iVt~rdlrm~~Keqv~s-~Ga~f~~~~~ee~~gGYAk~ms~~~~~~q~~  236 (356)
T COG3288         158 AAGTVSPAKVLVIGAGVAGLAAIATAVRLGAIVTARDLRMFKKEQVES-LGAKFLAVEDEESAGGYAKEMSEEFIAKQAE  236 (356)
T ss_pred             hcccccchhhhhhhHHHHHHHHHHHHhhcceEEehhhhhhHHhhhhhh-cccccccccccccCCCccccCCHHHHHHHHH
Confidence            333356678899999999999999999999999988877777777766 77543211111           112      


Q ss_pred             -HHHhhCCccEEEEcC---CCCC---ChHHHHhccccCCeEEEEccCCC-Cccc--chHHHhhccceEEEEeec
Q 018382          238 -MQEAADSLDYIIDTV---PANH---PLEPYLSLLKLDGKLILTGVINT-PMQF--LTPMVMLGRKAITGSFIG  301 (357)
Q Consensus       238 -~~~~~~~~d~v~d~~---g~~~---~~~~~~~~l~~~G~~v~~g~~~~-~~~~--~~~~~~~~~~~i~g~~~~  301 (357)
                       +.+...++|+||.++   |.+.   ..+...+.|+||+.+|++....+ +...  +-.....+..+++|...-
T Consensus       237 ~~a~~~~~~DivITTAlIPGrpAP~Lvt~~mv~sMkpGSViVDlAa~~GGNce~t~pg~~v~~~gV~iig~~nl  310 (356)
T COG3288         237 LVAEQAKEVDIVITTALIPGRPAPKLVTAEMVASMKPGSVIVDLAAETGGNCELTEPGKVVTKNGVKIIGYTNL  310 (356)
T ss_pred             HHHHHhcCCCEEEEecccCCCCCchhhHHHHHHhcCCCcEEEEehhhcCCCcccccCCeEEEeCCeEEEeecCc
Confidence             112224899999876   2221   34568889999999999865433 2221  112245677788887764

>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial

Probab=96.42  E-value=0.015  Score=56.37  Aligned_cols=76  Identities=18%  Similarity=0.241  Sum_probs=55.5

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCc---------------------HHHHHHHHhcCCcEEEcCCCh-h
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSD---------------------KKRVEAMEHLGADQYLVSSDA-T  236 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~---------------------~~~~~~~~~~g~~~vv~~~~~-~  236 (357)
                      ..+++|+|+|+|+.|+.++..++..|.+|++....+                     ...+++++ +|.+..++..-. +
T Consensus       139 ~~~~~V~IIG~GpaGl~aA~~l~~~G~~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~-~Gv~~~~~~~v~~~  217 (467)
T TIGR01318       139 PTGKRVAVIGAGPAGLACADILARAGVQVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTA-MGIEFHLNCEVGRD  217 (467)
T ss_pred             CCCCeEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHH-CCCEEECCCEeCCc
Confidence            367899999999999999999999999998887653                     23445555 887665543221 1


Q ss_pred             -HHHHhhCCccEEEEcCCCC
Q 018382          237 -RMQEAADSLDYIIDTVPAN  255 (357)
Q Consensus       237 -~~~~~~~~~d~v~d~~g~~  255 (357)
                       .++.+..++|.||.++|..
T Consensus       218 ~~~~~~~~~~D~vilAtGa~  237 (467)
T TIGR01318       218 ISLDDLLEDYDAVFLGVGTY  237 (467)
T ss_pred             cCHHHHHhcCCEEEEEeCCC
Confidence             2233345799999999986

This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.42  E-value=0.05  Score=48.15  Aligned_cols=75  Identities=9%  Similarity=0.103  Sum_probs=50.0

Q ss_pred             CCCeEEEEec---ChHHHHHHHHHHHcCCeEEEEeCCc---HHHHHHHHhc-CCc---EEEcCCChhHHHH----hh---
Q 018382          180 SGLRGGILGL---GGVGHMGVLIAKAMGHHVTVISSSD---KKRVEAMEHL-GAD---QYLVSSDATRMQE----AA---  242 (357)
Q Consensus       180 ~~~~VlI~G~---g~~G~~ai~la~~~g~~V~~~~~~~---~~~~~~~~~~-g~~---~vv~~~~~~~~~~----~~---  242 (357)
                      .+++++|+|+   +++|.++++.+...|++|+++.+++   ++.+.+.+++ +..   ..+|..+++.+++    +.   
T Consensus         6 ~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   85 (257)
T PRK08594          6 EGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEEV   85 (257)
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhC
Confidence            5788999986   5999999998888999999986542   3444454434 211   2245555443332    22   


Q ss_pred             CCccEEEEcCCC
Q 018382          243 DSLDYIIDTVPA  254 (357)
Q Consensus       243 ~~~d~v~d~~g~  254 (357)
                      +.+|++++++|.
T Consensus        86 g~ld~lv~nag~   97 (257)
T PRK08594         86 GVIHGVAHCIAF   97 (257)
T ss_pred             CCccEEEECccc
Confidence            369999998863

>PRK08267 short chain dehydrogenase; Provisional

Probab=96.41  E-value=0.017  Score=51.12  Aligned_cols=74  Identities=19%  Similarity=0.191  Sum_probs=53.6

Q ss_pred             CeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcC-C---cEEEcCCChhHHHH----h----hCCccEE
Q 018382          182 LRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLG-A---DQYLVSSDATRMQE----A----ADSLDYI  248 (357)
Q Consensus       182 ~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g-~---~~vv~~~~~~~~~~----~----~~~~d~v  248 (357)
                      +++||+|+ |++|..+++.+...|++|++++++.++.+.+.+..+ .   ...+|..+.+.+.+    .    .+++|++
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~v   81 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDVL   81 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCEE
Confidence            47899987 999999999888889999999998887776655443 1   12345565443332    2    2368999


Q ss_pred             EEcCCCC
Q 018382          249 IDTVPAN  255 (357)
Q Consensus       249 ~d~~g~~  255 (357)
                      +.++|..
T Consensus        82 i~~ag~~   88 (260)
T PRK08267         82 FNNAGIL   88 (260)
T ss_pred             EECCCCC
Confidence            9998763

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.40  E-value=0.022  Score=51.00  Aligned_cols=75  Identities=19%  Similarity=0.269  Sum_probs=51.9

Q ss_pred             CCCeEEEEec---ChHHHHHHHHHHHcCCeEEEEeCCc---HHHHHHHHhcCCcE--EEcCCChhHHHH----hh---CC
Q 018382          180 SGLRGGILGL---GGVGHMGVLIAKAMGHHVTVISSSD---KKRVEAMEHLGADQ--YLVSSDATRMQE----AA---DS  244 (357)
Q Consensus       180 ~~~~VlI~G~---g~~G~~ai~la~~~g~~V~~~~~~~---~~~~~~~~~~g~~~--vv~~~~~~~~~~----~~---~~  244 (357)
                      .++++||+|+   +++|+++++.+...|++|+++.+++   ++.+.+.++++...  .+|..+.+.+++    +.   +.
T Consensus         4 ~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~~g~   83 (274)
T PRK08415          4 KGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKDLGK   83 (274)
T ss_pred             CCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            4689999986   4899999998888999999988874   23344434355332  346666543332    22   37


Q ss_pred             ccEEEEcCCC
Q 018382          245 LDYIIDTVPA  254 (357)
Q Consensus       245 ~d~v~d~~g~  254 (357)
                      +|++++++|.
T Consensus        84 iDilVnnAG~   93 (274)
T PRK08415         84 IDFIVHSVAF   93 (274)
T ss_pred             CCEEEECCcc
Confidence            9999999884

>PRK06138 short chain dehydrogenase; Provisional

Probab=96.40  E-value=0.017  Score=50.60  Aligned_cols=75  Identities=15%  Similarity=0.189  Sum_probs=52.8

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc--CCc-E--EEcCCChhHHHHhh-------CCcc
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL--GAD-Q--YLVSSDATRMQEAA-------DSLD  246 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~--g~~-~--vv~~~~~~~~~~~~-------~~~d  246 (357)
                      +++++||+|+ |.+|..+++.+...|++|+++.++.++.....+..  +.. .  ..|..+++.++++.       +++|
T Consensus         4 ~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id   83 (252)
T PRK06138          4 AGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRLD   83 (252)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            4678999987 99999999988888999999999877655444423  321 1  23555554433321       3799


Q ss_pred             EEEEcCCC
Q 018382          247 YIIDTVPA  254 (357)
Q Consensus       247 ~v~d~~g~  254 (357)
                      +++.++|.
T Consensus        84 ~vi~~ag~   91 (252)
T PRK06138         84 VLVNNAGF   91 (252)
T ss_pred             EEEECCCC
Confidence            99999885

>PRK06125 short chain dehydrogenase; Provisional

Probab=96.40  E-value=0.02  Score=50.63  Aligned_cols=75  Identities=23%  Similarity=0.297  Sum_probs=53.2

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc----CCc-E--EEcCCChhHHHHhh---CCccEE
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL----GAD-Q--YLVSSDATRMQEAA---DSLDYI  248 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~----g~~-~--vv~~~~~~~~~~~~---~~~d~v  248 (357)
                      .++++||+|+ +++|..+++.+...|++|+++++++++.+.+.+.+    +.. +  ..|..+.+.+.++.   +.+|++
T Consensus         6 ~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~l   85 (259)
T PRK06125          6 AGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGDIDIL   85 (259)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCCCCEE
Confidence            4689999987 99999999998889999999999877665543322    321 1  23555544443332   479999


Q ss_pred             EEcCCC
Q 018382          249 IDTVPA  254 (357)
Q Consensus       249 ~d~~g~  254 (357)
                      ++++|.
T Consensus        86 v~~ag~   91 (259)
T PRK06125         86 VNNAGA   91 (259)
T ss_pred             EECCCC
Confidence            998875

>PRK08017 oxidoreductase; Provisional

Probab=96.39  E-value=0.026  Score=49.66  Aligned_cols=72  Identities=19%  Similarity=0.164  Sum_probs=53.2

Q ss_pred             CeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEE-EcCCChhHHH----Hh---h-CCccEEEEc
Q 018382          182 LRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQY-LVSSDATRMQ----EA---A-DSLDYIIDT  251 (357)
Q Consensus       182 ~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~v-v~~~~~~~~~----~~---~-~~~d~v~d~  251 (357)
                      +++||+|+ |++|.++++.+...|++|+++.++.++.+.+.+ .+...+ .|..+.+.+.    .+   . +.+|.++.+
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~   81 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNS-LGFTGILLDLDDPESVERAADEVIALTDNRLYGLFNN   81 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHh-CCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEEC
Confidence            47999998 999999999999999999999999888777665 665433 4555543322    22   1 367889988


Q ss_pred             CCC
Q 018382          252 VPA  254 (357)
Q Consensus       252 ~g~  254 (357)
                      .|.
T Consensus        82 ag~   84 (256)
T PRK08017         82 AGF   84 (256)
T ss_pred             CCC
Confidence            774

>PRK08643 acetoin reductase; Validated

Probab=96.37  E-value=0.019  Score=50.61  Aligned_cols=74  Identities=15%  Similarity=0.210  Sum_probs=51.7

Q ss_pred             CCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc---CCc---EEEcCCChhHHHH----hh---CCcc
Q 018382          181 GLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL---GAD---QYLVSSDATRMQE----AA---DSLD  246 (357)
Q Consensus       181 ~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~---g~~---~vv~~~~~~~~~~----~~---~~~d  246 (357)
                      ++++||+|+ |++|..+++.+...|++|++++++.++.+.+.+.+   +..   ...|..+++.+.+    +.   +++|
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   81 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLN   81 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            568899987 99999999999889999999999877655444322   322   1235555443332    22   3799


Q ss_pred             EEEEcCCC
Q 018382          247 YIIDTVPA  254 (357)
Q Consensus       247 ~v~d~~g~  254 (357)
                      +++.++|.
T Consensus        82 ~vi~~ag~   89 (256)
T PRK08643         82 VVVNNAGV   89 (256)
T ss_pred             EEEECCCC
Confidence            99999875

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=96.36  E-value=0.02  Score=50.60  Aligned_cols=72  Identities=15%  Similarity=0.128  Sum_probs=50.8

Q ss_pred             eEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc---CCcE--EEcCCChhHHHHh-------hCCccEEE
Q 018382          183 RGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL---GADQ--YLVSSDATRMQEA-------ADSLDYII  249 (357)
Q Consensus       183 ~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~---g~~~--vv~~~~~~~~~~~-------~~~~d~v~  249 (357)
                      ++||+|+ +++|.++++.+...|++|+++++++++.+.+.+++   +..+  ..|..+.+.++++       .+++|+++
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~li   81 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDALV   81 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence            6899987 99999999999888999999999887665544322   3222  2355554433332       23799999


Q ss_pred             EcCCC
Q 018382          250 DTVPA  254 (357)
Q Consensus       250 d~~g~  254 (357)
                      +++|.
T Consensus        82 ~naG~   86 (259)
T PRK08340         82 WNAGN   86 (259)
T ss_pred             ECCCC
Confidence            99874

>PRK05875 short chain dehydrogenase; Provisional

Probab=96.35  E-value=0.027  Score=50.31  Aligned_cols=75  Identities=17%  Similarity=0.182  Sum_probs=51.7

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcC-----C-cEE--EcCCChhHHHHh----h---C
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLG-----A-DQY--LVSSDATRMQEA----A---D  243 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g-----~-~~v--v~~~~~~~~~~~----~---~  243 (357)
                      +++++||+|+ |.+|..+++.+...|++|++++++.++.+...+++.     . -.+  .|..+++.+...    .   +
T Consensus         6 ~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   85 (276)
T PRK05875          6 QDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWHG   85 (276)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4689999987 999999999999899999999988766544433221     1 122  255554433322    1   3


Q ss_pred             CccEEEEcCCC
Q 018382          244 SLDYIIDTVPA  254 (357)
Q Consensus       244 ~~d~v~d~~g~  254 (357)
                      ++|++|.++|.
T Consensus        86 ~~d~li~~ag~   96 (276)
T PRK05875         86 RLHGVVHCAGG   96 (276)
T ss_pred             CCCEEEECCCc
Confidence            78999999874

>PRK09072 short chain dehydrogenase; Provisional

Probab=96.35  E-value=0.024  Score=50.24  Aligned_cols=76  Identities=14%  Similarity=0.195  Sum_probs=53.5

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc--CC-cE--EEcCCChhHHHHh------hCCccE
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL--GA-DQ--YLVSSDATRMQEA------ADSLDY  247 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~--g~-~~--vv~~~~~~~~~~~------~~~~d~  247 (357)
                      +++++||+|+ |++|..+++.+...|++|+++++++++.+.+...+  +. .+  ..|..+.+.++.+      .+.+|+
T Consensus         4 ~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id~   83 (263)
T PRK09072          4 KDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGINV   83 (263)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCCE
Confidence            4678999986 99999999998888999999999887766554432  21 11  2355554433322      246899


Q ss_pred             EEEcCCCC
Q 018382          248 IIDTVPAN  255 (357)
Q Consensus       248 v~d~~g~~  255 (357)
                      ++.++|..
T Consensus        84 lv~~ag~~   91 (263)
T PRK09072         84 LINNAGVN   91 (263)
T ss_pred             EEECCCCC
Confidence            99998753

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.33  E-value=0.025  Score=50.17  Aligned_cols=75  Identities=17%  Similarity=0.280  Sum_probs=50.2

Q ss_pred             CCCeEEEEec-C--hHHHHHHHHHHHcCCeEEEEeCCcH---HHHHHHHhcCCcE--EEcCCChhHHHHh----h---CC
Q 018382          180 SGLRGGILGL-G--GVGHMGVLIAKAMGHHVTVISSSDK---KRVEAMEHLGADQ--YLVSSDATRMQEA----A---DS  244 (357)
Q Consensus       180 ~~~~VlI~G~-g--~~G~~ai~la~~~g~~V~~~~~~~~---~~~~~~~~~g~~~--vv~~~~~~~~~~~----~---~~  244 (357)
                      .++++||+|+ +  ++|.++++.+...|++|++..+++.   ..+.+.+..|...  .+|..+++.++++    .   +.
T Consensus         7 ~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   86 (260)
T PRK06603          7 QGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKWGS   86 (260)
T ss_pred             CCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            5788999987 4  7999998888888999999887632   2333333345332  2466665443332    2   36


Q ss_pred             ccEEEEcCCC
Q 018382          245 LDYIIDTVPA  254 (357)
Q Consensus       245 ~d~v~d~~g~  254 (357)
                      +|++++++|.
T Consensus        87 iDilVnnag~   96 (260)
T PRK06603         87 FDFLLHGMAF   96 (260)
T ss_pred             ccEEEEcccc
Confidence            9999998873

>PRK10258 biotin biosynthesis protein BioC; Provisional

Probab=96.31  E-value=0.1  Score=46.00  Aligned_cols=153  Identities=14%  Similarity=0.111  Sum_probs=83.1

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCC----
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPA----  254 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~----  254 (357)
                      .++.+||-+|+|. |..+..+++ .|.+|++++.+++..+.+++.......+..+..+ +.-..+.+|+|+....-    
T Consensus        41 ~~~~~vLDiGcG~-G~~~~~l~~-~~~~v~~~D~s~~~l~~a~~~~~~~~~~~~d~~~-~~~~~~~fD~V~s~~~l~~~~  117 (251)
T PRK10258         41 RKFTHVLDAGCGP-GWMSRYWRE-RGSQVTALDLSPPMLAQARQKDAADHYLAGDIES-LPLATATFDLAWSNLAVQWCG  117 (251)
T ss_pred             cCCCeEEEeeCCC-CHHHHHHHH-cCCeEEEEECCHHHHHHHHhhCCCCCEEEcCccc-CcCCCCcEEEEEECchhhhcC
Confidence            4678899999864 555555544 5789999999998888777744332222221111 11112369999864321    


Q ss_pred             --CCChHHHHhccccCCeEEEEccCCCCcccchHHHhhc-cceEEEEeecCHHHHHHHHHHHHhcCCCccE--EEeeccc
Q 018382          255 --NHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLG-RKAITGSFIGSMKETKEMLEFCREKGVTSMI--EVIKMDY  329 (357)
Q Consensus       255 --~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~i~g~~~~~~~~~~~~~~~~~~~~l~~~i--~~~~~~~  329 (357)
                        ...+..+.+.|+++|.++......+.... ....+.. ..........+.+   ++.+++....+....  -++.+++
T Consensus       118 d~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~e-l~~~~~~~~~~~~~~~~~~~~---~l~~~l~~~~~~~~~~~~~~~f~~  193 (251)
T PRK10258        118 NLSTALRELYRVVRPGGVVAFTTLVQGSLPE-LHQAWQAVDERPHANRFLPPD---AIEQALNGWRYQHHIQPITLWFDD  193 (251)
T ss_pred             CHHHHHHHHHHHcCCCeEEEEEeCCCCchHH-HHHHHHHhccCCccccCCCHH---HHHHHHHhCCceeeeeEEEEECCC
Confidence              12466788899999999876544332211 1111100 0011111122333   333344443343332  3556788


Q ss_pred             HHHHHHHHH
Q 018382          330 VNKAFERLE  338 (357)
Q Consensus       330 ~~~a~~~~~  338 (357)
                      ..+.++.++
T Consensus       194 ~~~~l~~lk  202 (251)
T PRK10258        194 ALSAMRSLK  202 (251)
T ss_pred             HHHHHHHHH
Confidence            888888776

>PRK06197 short chain dehydrogenase; Provisional

Probab=96.31  E-value=0.017  Score=52.62  Aligned_cols=76  Identities=26%  Similarity=0.306  Sum_probs=52.1

Q ss_pred             CCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc-----CCc---EEEcCCChhHHHHh----h---
Q 018382          179 QSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL-----GAD---QYLVSSDATRMQEA----A---  242 (357)
Q Consensus       179 ~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~-----g~~---~vv~~~~~~~~~~~----~---  242 (357)
                      ..++++||+|+ |++|.++++.+...|++|++++++.++.+.+.+.+     +..   ..+|..+.+.++++    .   
T Consensus        14 ~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~   93 (306)
T PRK06197         14 QSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAY   93 (306)
T ss_pred             CCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhC
Confidence            36789999987 99999999988888999999999877654432212     111   12355554433332    2   


Q ss_pred             CCccEEEEcCCC
Q 018382          243 DSLDYIIDTVPA  254 (357)
Q Consensus       243 ~~~d~v~d~~g~  254 (357)
                      +++|++|.++|.
T Consensus        94 ~~iD~li~nAg~  105 (306)
T PRK06197         94 PRIDLLINNAGV  105 (306)
T ss_pred             CCCCEEEECCcc
Confidence            369999999874

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=96.30  E-value=0.025  Score=49.89  Aligned_cols=75  Identities=15%  Similarity=0.164  Sum_probs=53.9

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCc-E--EEcCCChhHHHHh-------hCCccEE
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGAD-Q--YLVSSDATRMQEA-------ADSLDYI  248 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~-~--vv~~~~~~~~~~~-------~~~~d~v  248 (357)
                      .++++||+|+ |++|...++.+...|++|++++++.++.+.+.+.++.. .  ..|..+.+.++.+       .+.+|++
T Consensus         5 ~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l   84 (257)
T PRK07067          5 QGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDIL   84 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            4678999987 99999999999888999999999988776666545422 1  2344444333322       1368999


Q ss_pred             EEcCCC
Q 018382          249 IDTVPA  254 (357)
Q Consensus       249 ~d~~g~  254 (357)
                      +.++|.
T Consensus        85 i~~ag~   90 (257)
T PRK07067         85 FNNAAL   90 (257)
T ss_pred             EECCCc
Confidence            998864

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.30  E-value=0.026  Score=50.69  Aligned_cols=96  Identities=17%  Similarity=0.153  Sum_probs=73.0

Q ss_pred             ccccchhhhhhhhhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhH
Q 018382          159 APLLCAGVTVFSPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATR  237 (357)
Q Consensus       159 a~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~  237 (357)
                      +.+||........|+..+.--.|++|.|+|. +.+|.-++.++...|++|++..+...                     .
T Consensus       137 ~~~PcTp~aii~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~---------------------~  195 (301)
T PRK14194        137 VLTPCTPSGCLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRST---------------------D  195 (301)
T ss_pred             CCCCCcHHHHHHHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCC---------------------C
Confidence            4567776667777776665457999999998 59999999999999999999765422                     1


Q ss_pred             HHHhhCCccEEEEcCCCCCChHHHHhccccCCeEEEEccC
Q 018382          238 MQEAADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVI  277 (357)
Q Consensus       238 ~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~  277 (357)
                      .++.....|+|+-++|....+...+  ++++..++++|..
T Consensus       196 l~e~~~~ADIVIsavg~~~~v~~~~--ik~GaiVIDvgin  233 (301)
T PRK14194        196 AKALCRQADIVVAAVGRPRLIDADW--LKPGAVVIDVGIN  233 (301)
T ss_pred             HHHHHhcCCEEEEecCChhcccHhh--ccCCcEEEEeccc
Confidence            3344556899999999985555443  8899899998854

>PRK06482 short chain dehydrogenase; Provisional

Probab=96.30  E-value=0.03  Score=50.00  Aligned_cols=73  Identities=15%  Similarity=0.106  Sum_probs=52.7

Q ss_pred             CeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCc---EEEcCCChhHHHHh-------hCCccEEEE
Q 018382          182 LRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGAD---QYLVSSDATRMQEA-------ADSLDYIID  250 (357)
Q Consensus       182 ~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~~-------~~~~d~v~d  250 (357)
                      +++||+|+ |.+|..+++.+...|.+|+++.+++++.+.+.+..+..   ...|..+.+.+.+.       .+++|++|.
T Consensus         3 k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~   82 (276)
T PRK06482          3 KTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVVS   82 (276)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            57999987 99999999988888999999999987776665544422   12455554433322       136899999


Q ss_pred             cCCC
Q 018382          251 TVPA  254 (357)
Q Consensus       251 ~~g~  254 (357)
                      ++|.
T Consensus        83 ~ag~   86 (276)
T PRK06482         83 NAGY   86 (276)
T ss_pred             CCCC
Confidence            9875

>PRK07035 short chain dehydrogenase; Provisional

Probab=96.26  E-value=0.026  Score=49.63  Aligned_cols=75  Identities=17%  Similarity=0.252  Sum_probs=52.1

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc---CCc-E--EEcCCChhHHHH----hh---CCc
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL---GAD-Q--YLVSSDATRMQE----AA---DSL  245 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~---g~~-~--vv~~~~~~~~~~----~~---~~~  245 (357)
                      +++++||+|+ |++|.++++.+...|++|++++++.++.+.+.+++   +.. +  .+|..+.+.+++    ..   +.+
T Consensus         7 ~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   86 (252)
T PRK07035          7 TGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGRL   86 (252)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            4678999987 99999999999989999999999877655444422   321 1  234544433322    21   368


Q ss_pred             cEEEEcCCC
Q 018382          246 DYIIDTVPA  254 (357)
Q Consensus       246 d~v~d~~g~  254 (357)
                      |+++.++|.
T Consensus        87 d~li~~ag~   95 (252)
T PRK07035         87 DILVNNAAA   95 (252)
T ss_pred             CEEEECCCc
Confidence            999998874

>PRK06181 short chain dehydrogenase; Provisional

Probab=96.25  E-value=0.026  Score=49.99  Aligned_cols=74  Identities=15%  Similarity=0.206  Sum_probs=51.0

Q ss_pred             CCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCCc---EEEcCCChhHHHHhh-------CCcc
Q 018382          181 GLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGAD---QYLVSSDATRMQEAA-------DSLD  246 (357)
Q Consensus       181 ~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~~---~vv~~~~~~~~~~~~-------~~~d  246 (357)
                      +.++||+|+ |++|..+++.+...|++|+++++++++.+.+.+.   .+..   ...|..+.+.+.+..       .++|
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   80 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGID   80 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            357899987 9999999999988899999999987665444322   2322   123555544333221       3689


Q ss_pred             EEEEcCCC
Q 018382          247 YIIDTVPA  254 (357)
Q Consensus       247 ~v~d~~g~  254 (357)
                      ++|.++|.
T Consensus        81 ~vi~~ag~   88 (263)
T PRK06181         81 ILVNNAGI   88 (263)
T ss_pred             EEEECCCc
Confidence            99999875

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=96.25  E-value=0.036  Score=48.83  Aligned_cols=75  Identities=15%  Similarity=0.180  Sum_probs=50.7

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHH-HHHHHHhcCCc---EEEcCCChhHHHHh-------hCCccE
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKK-RVEAMEHLGAD---QYLVSSDATRMQEA-------ADSLDY  247 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~-~~~~~~~~g~~---~vv~~~~~~~~~~~-------~~~~d~  247 (357)
                      +++++||+|+ +++|.++++.+...|++|+++.+++.. .....+..+.+   ...|..+.+.++++       .+++|+
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD~   86 (251)
T PRK12481          7 NGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHIDI   86 (251)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5789999987 999999999998999999988775432 22222224532   12455555443332       237999


Q ss_pred             EEEcCCC
Q 018382          248 IIDTVPA  254 (357)
Q Consensus       248 v~d~~g~  254 (357)
                      +++++|.
T Consensus        87 lv~~ag~   93 (251)
T PRK12481         87 LINNAGI   93 (251)
T ss_pred             EEECCCc
Confidence            9999875

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=96.25  E-value=0.033  Score=48.89  Aligned_cols=72  Identities=17%  Similarity=0.221  Sum_probs=52.4

Q ss_pred             eEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcE---EEcCCChhHHHHh----h---CCccEEEEc
Q 018382          183 RGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQ---YLVSSDATRMQEA----A---DSLDYIIDT  251 (357)
Q Consensus       183 ~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~----~---~~~d~v~d~  251 (357)
                      +++|+|+ |++|.+++..+...|++|+++++++++.+.+.+.++...   ..|..+.+.+++.    .   +++|+++.+
T Consensus         2 ~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~~   81 (248)
T PRK10538          2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVNN   81 (248)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            6899987 999999999998889999999999887766655455321   2355554433322    1   379999998


Q ss_pred             CCC
Q 018382          252 VPA  254 (357)
Q Consensus       252 ~g~  254 (357)
                      +|.
T Consensus        82 ag~   84 (248)
T PRK10538         82 AGL   84 (248)
T ss_pred             CCc
Confidence            875

>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.25  E-value=0.051  Score=48.45  Aligned_cols=96  Identities=18%  Similarity=0.187  Sum_probs=71.7

Q ss_pred             ccccchhhhhhhhhhccCCCCCCCeEEEEecC-hHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhH
Q 018382          159 APLLCAGVTVFSPLSHFGLKQSGLRGGILGLG-GVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATR  237 (357)
Q Consensus       159 a~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g-~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~  237 (357)
                      +.+||.....+..|...+.--.|++|+|+|.| .+|.-++.++...|+.|++..+...                     .
T Consensus       135 ~~~PcTp~avi~lL~~~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t~---------------------~  193 (285)
T PRK14191        135 GFVPATPMGVMRLLKHYHIEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHILTK---------------------D  193 (285)
T ss_pred             CCCCCcHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCCcH---------------------H
Confidence            45677777777777766653579999999975 9999999999999999988643211                     1


Q ss_pred             HHHhhCCccEEEEcCCCCCChHHHHhccccCCeEEEEccC
Q 018382          238 MQEAADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVI  277 (357)
Q Consensus       238 ~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~  277 (357)
                      +++....+|+|+-++|.+..+.  .+.++++..++.+|..
T Consensus       194 l~~~~~~ADIvV~AvG~p~~i~--~~~vk~GavVIDvGi~  231 (285)
T PRK14191        194 LSFYTQNADIVCVGVGKPDLIK--ASMVKKGAVVVDIGIN  231 (285)
T ss_pred             HHHHHHhCCEEEEecCCCCcCC--HHHcCCCcEEEEeecc
Confidence            2344557899999999985433  4577999999999864

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=96.24  E-value=0.028  Score=49.65  Aligned_cols=75  Identities=21%  Similarity=0.252  Sum_probs=53.2

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCCc---EEEcCCChhHHHH----h---hCCc
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGAD---QYLVSSDATRMQE----A---ADSL  245 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~~---~vv~~~~~~~~~~----~---~~~~  245 (357)
                      +++++||+|+ |++|..+++.+...|++|++++++.++.+.+.+.   .+..   ...|..+.+.+++    +   ..++
T Consensus        11 ~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~i   90 (259)
T PRK08213         11 SGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGHV   90 (259)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            5789999987 9999999999988999999999987765544432   2321   2245555544422    2   1368


Q ss_pred             cEEEEcCCC
Q 018382          246 DYIIDTVPA  254 (357)
Q Consensus       246 d~v~d~~g~  254 (357)
                      |+++.++|.
T Consensus        91 d~vi~~ag~   99 (259)
T PRK08213         91 DILVNNAGA   99 (259)
T ss_pred             CEEEECCCC
Confidence            999999874

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=96.24  E-value=0.025  Score=49.75  Aligned_cols=75  Identities=16%  Similarity=0.220  Sum_probs=52.8

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc---CCc---EEEcCCChhHHHHhh-------CCc
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL---GAD---QYLVSSDATRMQEAA-------DSL  245 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~---g~~---~vv~~~~~~~~~~~~-------~~~  245 (357)
                      .++++||+|+ |++|.++++.+...|++|+++.+++++...+.+++   +..   ...|..+.+.+.+..       +++
T Consensus         8 ~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   87 (254)
T PRK08085          8 AGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGPI   87 (254)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCCC
Confidence            5678999987 99999999999888999999999877655443322   321   123555544333321       368


Q ss_pred             cEEEEcCCC
Q 018382          246 DYIIDTVPA  254 (357)
Q Consensus       246 d~v~d~~g~  254 (357)
                      |+++.++|.
T Consensus        88 d~vi~~ag~   96 (254)
T PRK08085         88 DVLINNAGI   96 (254)
T ss_pred             CEEEECCCc
Confidence            999999875

>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.24  E-value=0.037  Score=49.29  Aligned_cols=96  Identities=20%  Similarity=0.224  Sum_probs=72.8

Q ss_pred             ccccchhhhhhhhhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhH
Q 018382          159 APLLCAGVTVFSPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATR  237 (357)
Q Consensus       159 a~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~  237 (357)
                      ...||.....+..|+....--.|++|+|+|- ..+|.-++.++...|+.|++..+...                     .
T Consensus       137 ~~~PcTp~av~~ll~~~~i~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T~---------------------~  195 (285)
T PRK10792        137 LLRPCTPRGIMTLLERYGIDTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFTK---------------------N  195 (285)
T ss_pred             CCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCCC---------------------C
Confidence            3567777777777777665357999999997 56999999999999999988765311                     1


Q ss_pred             HHHhhCCccEEEEcCCCCCChHHHHhccccCCeEEEEccC
Q 018382          238 MQEAADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVI  277 (357)
Q Consensus       238 ~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~  277 (357)
                      +++....+|+++.++|.+..+.  .+.++++-.++++|..
T Consensus       196 l~~~~~~ADIvi~avG~p~~v~--~~~vk~gavVIDvGin  233 (285)
T PRK10792        196 LRHHVRNADLLVVAVGKPGFIP--GEWIKPGAIVIDVGIN  233 (285)
T ss_pred             HHHHHhhCCEEEEcCCCccccc--HHHcCCCcEEEEcccc
Confidence            3445567999999999985443  3788999999999854

>PLN02780 ketoreductase/ oxidoreductase

Probab=96.23  E-value=0.022  Score=52.23  Aligned_cols=75  Identities=12%  Similarity=0.167  Sum_probs=51.0

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh----cCCc----EEEcCCC--hhHHHHh---hC--
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH----LGAD----QYLVSSD--ATRMQEA---AD--  243 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~----~g~~----~vv~~~~--~~~~~~~---~~--  243 (357)
                      .|++++|+|+ +++|.+.++.+...|++|+++++++++.+.+.++    ++..    ..+|..+  .+.++.+   .+  
T Consensus        52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~~  131 (320)
T PLN02780         52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEGL  131 (320)
T ss_pred             cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcCC
Confidence            5889999987 9999998888888899999999998877655432    2211    1234432  2222222   22  


Q ss_pred             CccEEEEcCCC
Q 018382          244 SLDYIIDTVPA  254 (357)
Q Consensus       244 ~~d~v~d~~g~  254 (357)
                      .+|++++++|.
T Consensus       132 didilVnnAG~  142 (320)
T PLN02780        132 DVGVLINNVGV  142 (320)
T ss_pred             CccEEEEecCc
Confidence            46699998874

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=96.22  E-value=0.023  Score=50.15  Aligned_cols=75  Identities=13%  Similarity=0.218  Sum_probs=53.2

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCCcE---EEcCCChhHHHHh-------hCCc
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGADQ---YLVSSDATRMQEA-------ADSL  245 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~~~---vv~~~~~~~~~~~-------~~~~  245 (357)
                      +++++||+|+ |.+|..+++.+...|++|+++.+++++.+.+.+.   .+.+.   ..|..+.+.+++.       .+++
T Consensus         6 ~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   85 (262)
T PRK13394          6 NGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGSV   85 (262)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            4689999987 9999999999999999999999988665544332   34332   2355554433322       1368


Q ss_pred             cEEEEcCCC
Q 018382          246 DYIIDTVPA  254 (357)
Q Consensus       246 d~v~d~~g~  254 (357)
                      |+++.++|.
T Consensus        86 d~vi~~ag~   94 (262)
T PRK13394         86 DILVSNAGI   94 (262)
T ss_pred             CEEEECCcc
Confidence            999998875

>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.19  E-value=0.035  Score=49.50  Aligned_cols=97  Identities=19%  Similarity=0.255  Sum_probs=72.2

Q ss_pred             ccccchhhhhhhhhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhH
Q 018382          159 APLLCAGVTVFSPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATR  237 (357)
Q Consensus       159 a~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~  237 (357)
                      ..+||........|++.+.--.|++|+|+|. ..+|.-++.++...|++|++..+..                     ..
T Consensus       136 ~~~PcTp~aii~lL~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t---------------------~~  194 (285)
T PRK14189        136 LFRPCTPYGVMKMLESIGIPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKT---------------------RD  194 (285)
T ss_pred             CCcCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCC---------------------CC
Confidence            4567776666666776665458999999997 5569999999999999999854321                     11


Q ss_pred             HHHhhCCccEEEEcCCCCCChHHHHhccccCCeEEEEccCC
Q 018382          238 MQEAADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVIN  278 (357)
Q Consensus       238 ~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~  278 (357)
                      +++.....|+|+-++|.+..+.  .+.++++-.++.+|...
T Consensus       195 l~~~~~~ADIVV~avG~~~~i~--~~~ik~gavVIDVGin~  233 (285)
T PRK14189        195 LAAHTRQADIVVAAVGKRNVLT--ADMVKPGATVIDVGMNR  233 (285)
T ss_pred             HHHHhhhCCEEEEcCCCcCccC--HHHcCCCCEEEEccccc
Confidence            3345557999999999885444  38899999999998653

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.19  E-value=0.027  Score=49.05  Aligned_cols=76  Identities=20%  Similarity=0.282  Sum_probs=51.7

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCCc---EEEcCCChhHHHHhh-------CCc
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGAD---QYLVSSDATRMQEAA-------DSL  245 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~~---~vv~~~~~~~~~~~~-------~~~  245 (357)
                      .+.+++|+|+ |++|..++..+...|++|++++++.++.+...+.   .+..   ...|..+.+.+.+..       +++
T Consensus         6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   85 (239)
T PRK07666          6 QGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSI   85 (239)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCc
Confidence            3578999987 9999999998888899999999987765443321   2322   123444444333322       379


Q ss_pred             cEEEEcCCCC
Q 018382          246 DYIIDTVPAN  255 (357)
Q Consensus       246 d~v~d~~g~~  255 (357)
                      |++|.++|..
T Consensus        86 d~vi~~ag~~   95 (239)
T PRK07666         86 DILINNAGIS   95 (239)
T ss_pred             cEEEEcCccc
Confidence            9999988753

>PRK06172 short chain dehydrogenase; Provisional

Probab=96.19  E-value=0.023  Score=49.97  Aligned_cols=75  Identities=19%  Similarity=0.227  Sum_probs=52.0

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCCc-E--EEcCCChhHHHH----h---hCCc
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGAD-Q--YLVSSDATRMQE----A---ADSL  245 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~~-~--vv~~~~~~~~~~----~---~~~~  245 (357)
                      .++++||+|+ |++|..+++.+...|++|+++++++++.+.+.+.   .+.. .  ..|..+.+.+.+    +   .+++
T Consensus         6 ~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i   85 (253)
T PRK06172          6 SGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGRL   85 (253)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence            4689999987 9999999988888899999999987765443322   3322 1  235555443332    2   1368


Q ss_pred             cEEEEcCCC
Q 018382          246 DYIIDTVPA  254 (357)
Q Consensus       246 d~v~d~~g~  254 (357)
                      |+++.++|.
T Consensus        86 d~li~~ag~   94 (253)
T PRK06172         86 DYAFNNAGI   94 (253)
T ss_pred             CEEEECCCC
Confidence            999998875

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.18  E-value=0.033  Score=49.77  Aligned_cols=76  Identities=21%  Similarity=0.286  Sum_probs=51.5

Q ss_pred             CCCCeEEEEec---ChHHHHHHHHHHHcCCeEEEEeCCc---HHHHHHHHhcCCc--EEEcCCChhHHHH----hh---C
Q 018382          179 QSGLRGGILGL---GGVGHMGVLIAKAMGHHVTVISSSD---KKRVEAMEHLGAD--QYLVSSDATRMQE----AA---D  243 (357)
Q Consensus       179 ~~~~~VlI~G~---g~~G~~ai~la~~~g~~V~~~~~~~---~~~~~~~~~~g~~--~vv~~~~~~~~~~----~~---~  243 (357)
                      -.++++||+|+   +++|.++++.+...|++|+++.+++   ++.+.+.++++..  ...|..+.+.+++    +.   +
T Consensus         8 ~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   87 (272)
T PRK08159          8 MAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKWG   87 (272)
T ss_pred             ccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhcC
Confidence            45788999986   5899999999988999999887753   3344444445632  2345555443333    22   3


Q ss_pred             CccEEEEcCCC
Q 018382          244 SLDYIIDTVPA  254 (357)
Q Consensus       244 ~~d~v~d~~g~  254 (357)
                      .+|++++++|.
T Consensus        88 ~iD~lv~nAG~   98 (272)
T PRK08159         88 KLDFVVHAIGF   98 (272)
T ss_pred             CCcEEEECCcc
Confidence            68999999874

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=96.18  E-value=0.032  Score=48.87  Aligned_cols=74  Identities=16%  Similarity=0.195  Sum_probs=50.3

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHH--HHHHHHhcCCc---EEEcCCChhHHH----Hhh---CCcc
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKK--RVEAMEHLGAD---QYLVSSDATRMQ----EAA---DSLD  246 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~--~~~~~~~~g~~---~vv~~~~~~~~~----~~~---~~~d  246 (357)
                      .++++||+|+ |++|.++++.+...|++|+++++++..  .+.+.+ .+..   ...|..+.+.+.    ++.   +++|
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   82 (248)
T TIGR01832         4 EGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEA-LGRRFLSLTADLSDIEAIKALVDSAVEEFGHID   82 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHh-cCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            5789999987 999999999998899999999886532  122222 4422   223555544333    221   3699


Q ss_pred             EEEEcCCC
Q 018382          247 YIIDTVPA  254 (357)
Q Consensus       247 ~v~d~~g~  254 (357)
                      ++++++|.
T Consensus        83 ~li~~ag~   90 (248)
T TIGR01832        83 ILVNNAGI   90 (248)
T ss_pred             EEEECCCC
Confidence            99998875

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=96.17  E-value=0.034  Score=48.35  Aligned_cols=70  Identities=19%  Similarity=0.216  Sum_probs=54.6

Q ss_pred             EEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHH--HHHHHHhcCCcEE-EcCCChhHHHHhhCCccEEEEcCCC
Q 018382          184 GGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKK--RVEAMEHLGADQY-LVSSDATRMQEAADSLDYIIDTVPA  254 (357)
Q Consensus       184 VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~--~~~~~~~~g~~~v-v~~~~~~~~~~~~~~~d~v~d~~g~  254 (357)
                      |+|+|+ |.+|...++.+...+.+|.+.+|+..+  ...++. .|+..+ .|+.+++.+.+...++|.||.+.+.
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~-~g~~vv~~d~~~~~~l~~al~g~d~v~~~~~~   74 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQA-LGAEVVEADYDDPESLVAALKGVDAVFSVTPP   74 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHH-TTTEEEES-TT-HHHHHHHHTTCSEEEEESSC
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhhc-ccceEeecccCCHHHHHHHHcCCceEEeecCc
Confidence            689997 999999999999988899999998753  344455 787543 4566677778888899999998884

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=96.17  E-value=0.031  Score=49.83  Aligned_cols=77  Identities=18%  Similarity=0.253  Sum_probs=55.0

Q ss_pred             CCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc---CCc------EEEcCCChhHHHHh-------
Q 018382          179 QSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL---GAD------QYLVSSDATRMQEA-------  241 (357)
Q Consensus       179 ~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~---g~~------~vv~~~~~~~~~~~-------  241 (357)
                      -.|+.+||+|+ .++|.+++..+...|++|+++.+++++.+..+..+   +..      ...|..+.+..+++       
T Consensus         6 l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~   85 (270)
T KOG0725|consen    6 LAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEK   85 (270)
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHHH
Confidence            46788999986 99999999999999999999999998766555432   221      23344443332222       


Q ss_pred             -hCCccEEEEcCCCC
Q 018382          242 -ADSLDYIIDTVPAN  255 (357)
Q Consensus       242 -~~~~d~v~d~~g~~  255 (357)
                       .+.+|+.++.+|..
T Consensus        86 ~~GkidiLvnnag~~  100 (270)
T KOG0725|consen   86 FFGKIDILVNNAGAL  100 (270)
T ss_pred             hCCCCCEEEEcCCcC
Confidence             24699999988775

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.17  E-value=0.027  Score=49.94  Aligned_cols=77  Identities=18%  Similarity=0.196  Sum_probs=51.5

Q ss_pred             CCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cC-C-cEEEcCCChhHHHH-------hhCCc
Q 018382          179 QSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LG-A-DQYLVSSDATRMQE-------AADSL  245 (357)
Q Consensus       179 ~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g-~-~~vv~~~~~~~~~~-------~~~~~  245 (357)
                      -+|+.|||+|+ +++|.++++=....|+++++.+.+.+..++..+.   .| + ..+.|-++.+.+.+       ..+.+
T Consensus        36 v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~G~V  115 (300)
T KOG1201|consen   36 VSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEVGDV  115 (300)
T ss_pred             ccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhcCCc
Confidence            35899999986 8999987777777799888877666543333221   34 2 34566666443332       23479


Q ss_pred             cEEEEcCCCC
Q 018382          246 DYIIDTVPAN  255 (357)
Q Consensus       246 d~v~d~~g~~  255 (357)
                      |+++|.+|--
T Consensus       116 ~ILVNNAGI~  125 (300)
T KOG1201|consen  116 DILVNNAGIV  125 (300)
T ss_pred             eEEEeccccc
Confidence            9999988763

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=96.17  E-value=0.045  Score=40.28  Aligned_cols=86  Identities=29%  Similarity=0.315  Sum_probs=59.5

Q ss_pred             eEEEEecChHHHHHHHHHHHcC---CeEEEE-eCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCCCh
Q 018382          183 RGGILGLGGVGHMGVLIAKAMG---HHVTVI-SSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPL  258 (357)
Q Consensus       183 ~VlI~G~g~~G~~ai~la~~~g---~~V~~~-~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~~  258 (357)
                      ++.|+|+|.+|.++++-+...|   .+|+++ .+++++.+.+.++++...... +.    .+.....|+||-|+-.. .+
T Consensus         1 kI~iIG~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~~~~~~~-~~----~~~~~~advvilav~p~-~~   74 (96)
T PF03807_consen    1 KIGIIGAGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYGVQATAD-DN----EEAAQEADVVILAVKPQ-QL   74 (96)
T ss_dssp             EEEEESTSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCTTEEESE-EH----HHHHHHTSEEEE-S-GG-GH
T ss_pred             CEEEECCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhccccccC-Ch----HHhhccCCEEEEEECHH-HH
Confidence            4677899999999999999888   789955 999999988888788554321 11    22333789999999887 55


Q ss_pred             HHHHhc---cccCCeEEEE
Q 018382          259 EPYLSL---LKLDGKLILT  274 (357)
Q Consensus       259 ~~~~~~---l~~~G~~v~~  274 (357)
                      ...++.   ..++..++++
T Consensus        75 ~~v~~~i~~~~~~~~vis~   93 (96)
T PF03807_consen   75 PEVLSEIPHLLKGKLVISI   93 (96)
T ss_dssp             HHHHHHHHHHHTTSEEEEE
T ss_pred             HHHHHHHhhccCCCEEEEe
Confidence            554444   3455556554

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>PRK06720 hypothetical protein; Provisional

Probab=96.16  E-value=0.04  Score=45.46  Aligned_cols=76  Identities=17%  Similarity=0.210  Sum_probs=50.9

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCCc---EEEcCCChhHHHHh-------hCCc
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGAD---QYLVSSDATRMQEA-------ADSL  245 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~~---~vv~~~~~~~~~~~-------~~~~  245 (357)
                      +++.++|.|+ +++|...+..+...|++|+++.+++++.+...+.   .+..   ...|..+.+.+.++       .+++
T Consensus        15 ~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~i   94 (169)
T PRK06720         15 AGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSRI   94 (169)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            5778999987 8999999988888899999999887655433222   3422   12344443333321       2368


Q ss_pred             cEEEEcCCCC
Q 018382          246 DYIIDTVPAN  255 (357)
Q Consensus       246 d~v~d~~g~~  255 (357)
                      |++++++|..
T Consensus        95 DilVnnAG~~  104 (169)
T PRK06720         95 DMLFQNAGLY  104 (169)
T ss_pred             CEEEECCCcC
Confidence            9999988754

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.16  E-value=0.025  Score=50.46  Aligned_cols=77  Identities=23%  Similarity=0.163  Sum_probs=57.1

Q ss_pred             CCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcE-EE-------cCCChhH----HHHh---h
Q 018382          179 QSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQ-YL-------VSSDATR----MQEA---A  242 (357)
Q Consensus       179 ~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~-vv-------~~~~~~~----~~~~---~  242 (357)
                      ++...++|+|+ .++|++.+.-++..|++|++++++.++...+.++++... +.       |..+.+.    ++++   .
T Consensus        31 k~~~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~  110 (331)
T KOG1210|consen   31 KPRRHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLE  110 (331)
T ss_pred             CccceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhcc
Confidence            45578999965 999999999999999999999999999998888777321 11       2222222    2222   2


Q ss_pred             CCccEEEEcCCCC
Q 018382          243 DSLDYIIDTVPAN  255 (357)
Q Consensus       243 ~~~d~v~d~~g~~  255 (357)
                      ..+|.+|.|+|..
T Consensus       111 ~~~d~l~~cAG~~  123 (331)
T KOG1210|consen  111 GPIDNLFCCAGVA  123 (331)
T ss_pred             CCcceEEEecCcc
Confidence            4799999999874

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=96.16  E-value=0.039  Score=50.72  Aligned_cols=75  Identities=17%  Similarity=0.153  Sum_probs=52.7

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcC--CeEEEEeCCcHHHHHHHHhcCC-c-E--EEcCCChhHHHHhhCCccEEEEcC
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMG--HHVTVISSSDKKRVEAMEHLGA-D-Q--YLVSSDATRMQEAADSLDYIIDTV  252 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g--~~V~~~~~~~~~~~~~~~~~g~-~-~--vv~~~~~~~~~~~~~~~d~v~d~~  252 (357)
                      .+++|||+|+ |.+|..+++.+...|  .+|++.++++.+...+.+.+.. . .  ..|..+.+.+.+...++|+||.++
T Consensus         3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~iD~Vih~A   82 (324)
T TIGR03589         3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALRGVDYVVHAA   82 (324)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHhcCCEEEECc
Confidence            4678999987 999999888877665  5898888776554433332321 1 1  236666666666667899999988


Q ss_pred             CC
Q 018382          253 PA  254 (357)
Q Consensus       253 g~  254 (357)
                      +.
T Consensus        83 g~   84 (324)
T TIGR03589        83 AL   84 (324)
T ss_pred             cc
Confidence            74

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.15  E-value=0.034  Score=49.24  Aligned_cols=75  Identities=21%  Similarity=0.365  Sum_probs=50.5

Q ss_pred             CCCeEEEEecC---hHHHHHHHHHHHcCCeEEEEeCCcHH---HHHHHHhcCCcEE--EcCCChhHHHH----hh---CC
Q 018382          180 SGLRGGILGLG---GVGHMGVLIAKAMGHHVTVISSSDKK---RVEAMEHLGADQY--LVSSDATRMQE----AA---DS  244 (357)
Q Consensus       180 ~~~~VlI~G~g---~~G~~ai~la~~~g~~V~~~~~~~~~---~~~~~~~~g~~~v--v~~~~~~~~~~----~~---~~  244 (357)
                      .++++||+|++   ++|.++++.+...|++|+++.++++.   .+.+.++++....  .|..+.+.+++    +.   +.
T Consensus         9 ~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   88 (258)
T PRK07533          9 AGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWGR   88 (258)
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcCC
Confidence            57899999863   89999999988899999999887543   2333333443222  35555443332    22   36


Q ss_pred             ccEEEEcCCC
Q 018382          245 LDYIIDTVPA  254 (357)
Q Consensus       245 ~d~v~d~~g~  254 (357)
                      +|++++++|.
T Consensus        89 ld~lv~nAg~   98 (258)
T PRK07533         89 LDFLLHSIAF   98 (258)
T ss_pred             CCEEEEcCcc
Confidence            8999999874

>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]

Probab=96.14  E-value=0.023  Score=50.45  Aligned_cols=106  Identities=18%  Similarity=0.248  Sum_probs=70.1

Q ss_pred             hhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHH---hcCCc-EE-EcCCChhHHHHhh
Q 018382          168 VFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAME---HLGAD-QY-LVSSDATRMQEAA  242 (357)
Q Consensus       168 a~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~---~~g~~-~v-v~~~~~~~~~~~~  242 (357)
                      +...+.....++||++||=+|+|- |.+++.+|+..|++|+.++-|++..+.+++   ..|.. ++ +...+   .+...
T Consensus        60 k~~~~~~kl~L~~G~~lLDiGCGW-G~l~~~aA~~y~v~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~l~d---~rd~~  135 (283)
T COG2230          60 KLDLILEKLGLKPGMTLLDIGCGW-GGLAIYAAEEYGVTVVGVTLSEEQLAYAEKRIAARGLEDNVEVRLQD---YRDFE  135 (283)
T ss_pred             HHHHHHHhcCCCCCCEEEEeCCCh-hHHHHHHHHHcCCEEEEeeCCHHHHHHHHHHHHHcCCCcccEEEecc---ccccc
Confidence            444444455569999999999865 667888889999999999999987766654   24532 11 11111   12233


Q ss_pred             CCccEEE-----EcCCCC---CChHHHHhccccCCeEEEEccC
Q 018382          243 DSLDYII-----DTVPAN---HPLEPYLSLLKLDGKLILTGVI  277 (357)
Q Consensus       243 ~~~d~v~-----d~~g~~---~~~~~~~~~l~~~G~~v~~g~~  277 (357)
                      +.||-|+     +.+|..   ..+..+.+.|+++|++++-...
T Consensus       136 e~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~G~~llh~I~  178 (283)
T COG2230         136 EPFDRIVSVGMFEHVGKENYDDFFKKVYALLKPGGRMLLHSIT  178 (283)
T ss_pred             cccceeeehhhHHHhCcccHHHHHHHHHhhcCCCceEEEEEec
Confidence            4577764     345553   2456788899999998876544

>PRK08862 short chain dehydrogenase; Provisional

Probab=96.12  E-value=0.041  Score=47.77  Aligned_cols=75  Identities=9%  Similarity=0.064  Sum_probs=52.5

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCCc---EEEcCCChhHHHH----hh---C-C
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGAD---QYLVSSDATRMQE----AA---D-S  244 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~~---~vv~~~~~~~~~~----~~---~-~  244 (357)
                      ++++++|+|+ +++|.+.+..+...|++|+++.+++++.+.+.++   .+.+   ...|..+.+.+++    +.   + .
T Consensus         4 ~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   83 (227)
T PRK08862          4 KSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNRA   83 (227)
T ss_pred             CCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            5688999987 8999999988888999999999988876554332   3432   1234445443332    21   3 6


Q ss_pred             ccEEEEcCCC
Q 018382          245 LDYIIDTVPA  254 (357)
Q Consensus       245 ~d~v~d~~g~  254 (357)
                      +|++|+++|.
T Consensus        84 iD~li~nag~   93 (227)
T PRK08862         84 PDVLVNNWTS   93 (227)
T ss_pred             CCEEEECCcc
Confidence            9999999863

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=96.11  E-value=0.036  Score=47.16  Aligned_cols=91  Identities=18%  Similarity=0.179  Sum_probs=54.4

Q ss_pred             CCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCc-------------------HHHHHHHHh---cCC-cEE--EcCC
Q 018382          180 SGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSD-------------------KKRVEAMEH---LGA-DQY--LVSS  233 (357)
Q Consensus       180 ~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~-------------------~~~~~~~~~---~g~-~~v--v~~~  233 (357)
                      ...+|+|+|+|++|..+++.+...|. ++++++...                   .|.+.+.++   +.. ..+  ++..
T Consensus        20 ~~~~VlviG~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~~~   99 (202)
T TIGR02356        20 LNSHVLIIGAGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTALKER   99 (202)
T ss_pred             cCCCEEEECCCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEehhc
Confidence            45789999999999999999999998 788887652                   222222222   221 111  1111


Q ss_pred             -ChhHHHHhhCCccEEEEcCCCCCChHHHHhccccCCe
Q 018382          234 -DATRMQEAADSLDYIIDTVPANHPLEPYLSLLKLDGK  270 (357)
Q Consensus       234 -~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~  270 (357)
                       +++.+.+...++|+||+|..+.......-+.++..++
T Consensus       100 i~~~~~~~~~~~~D~Vi~~~d~~~~r~~l~~~~~~~~i  137 (202)
T TIGR02356       100 VTAENLELLINNVDLVLDCTDNFATRYLINDACVALGT  137 (202)
T ss_pred             CCHHHHHHHHhCCCEEEECCCCHHHHHHHHHHHHHcCC
Confidence             1233444556899999999876332233333344443

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.11  E-value=0.045  Score=48.23  Aligned_cols=74  Identities=18%  Similarity=0.166  Sum_probs=50.3

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcH-HHHHHHHhcCCc-EEEcCCChhHHHHhh-------CCccEEE
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDK-KRVEAMEHLGAD-QYLVSSDATRMQEAA-------DSLDYII  249 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~-~~~~~~~~~g~~-~vv~~~~~~~~~~~~-------~~~d~v~  249 (357)
                      .+++++|+|+ |++|.++++.+...|++|+++.+..+ ..+.+.+ .+.. ...|..+++.++++.       +++|++|
T Consensus         6 ~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li   84 (255)
T PRK06463          6 KGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELRE-KGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLV   84 (255)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHh-CCCeEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            4688999987 99999999999888999988765543 3333433 3432 234555654433321       3689999


Q ss_pred             EcCCC
Q 018382          250 DTVPA  254 (357)
Q Consensus       250 d~~g~  254 (357)
                      .++|.
T Consensus        85 ~~ag~   89 (255)
T PRK06463         85 NNAGI   89 (255)
T ss_pred             ECCCc
Confidence            99875

>PRK08251 short chain dehydrogenase; Provisional

Probab=96.10  E-value=0.035  Score=48.64  Aligned_cols=74  Identities=20%  Similarity=0.162  Sum_probs=50.8

Q ss_pred             CCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc-----CCc-E--EEcCCChhHHHH----h---hCC
Q 018382          181 GLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL-----GAD-Q--YLVSSDATRMQE----A---ADS  244 (357)
Q Consensus       181 ~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~-----g~~-~--vv~~~~~~~~~~----~---~~~  244 (357)
                      ++++||+|+ |++|..+++.+...|++|+++++++++.+.+...+     +.. +  ..|..+.+.+.+    +   .++
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG   81 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            467999987 99999988888888999999999887665543322     211 1  235555443322    2   237


Q ss_pred             ccEEEEcCCC
Q 018382          245 LDYIIDTVPA  254 (357)
Q Consensus       245 ~d~v~d~~g~  254 (357)
                      +|++|.++|-
T Consensus        82 id~vi~~ag~   91 (248)
T PRK08251         82 LDRVIVNAGI   91 (248)
T ss_pred             CCEEEECCCc
Confidence            9999998874

>PRK07574 formate dehydrogenase; Provisional

Probab=96.09  E-value=0.038  Score=51.74  Aligned_cols=89  Identities=19%  Similarity=0.210  Sum_probs=63.2

Q ss_pred             CCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCCC--
Q 018382          180 SGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHP--  257 (357)
Q Consensus       180 ~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~--  257 (357)
                      .|++|.|+|.|.+|..+++.++.+|++|++..++....+...+ +|....      ..++++....|+|+.+......  
T Consensus       191 ~gktVGIvG~G~IG~~vA~~l~~fG~~V~~~dr~~~~~~~~~~-~g~~~~------~~l~ell~~aDvV~l~lPlt~~T~  263 (385)
T PRK07574        191 EGMTVGIVGAGRIGLAVLRRLKPFDVKLHYTDRHRLPEEVEQE-LGLTYH------VSFDSLVSVCDVVTIHCPLHPETE  263 (385)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCCCCchhhHhh-cCceec------CCHHHHhhcCCEEEEcCCCCHHHH
Confidence            5788999999999999999999999999999987533332333 554321      1245566678999888765422  


Q ss_pred             --h-HHHHhccccCCeEEEEc
Q 018382          258 --L-EPYLSLLKLDGKLILTG  275 (357)
Q Consensus       258 --~-~~~~~~l~~~G~~v~~g  275 (357)
                        + ...+..|+++..+|.++
T Consensus       264 ~li~~~~l~~mk~ga~lIN~a  284 (385)
T PRK07574        264 HLFDADVLSRMKRGSYLVNTA  284 (385)
T ss_pred             HHhCHHHHhcCCCCcEEEECC
Confidence              2 34677888888877764

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=96.08  E-value=0.041  Score=47.98  Aligned_cols=75  Identities=20%  Similarity=0.249  Sum_probs=53.3

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCc---EEEcCCChhHHHHh-------hCCccEE
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGAD---QYLVSSDATRMQEA-------ADSLDYI  248 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~~-------~~~~d~v  248 (357)
                      +++++||+|+ |.+|..+++.+...|+.|+...++.++.+.+....+..   ...|..+.+.++++       ..++|++
T Consensus         5 ~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   84 (245)
T PRK12936          5 SGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDIL   84 (245)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            4678999987 99999999998888999988888877766655445432   12344554433332       2369999


Q ss_pred             EEcCCC
Q 018382          249 IDTVPA  254 (357)
Q Consensus       249 ~d~~g~  254 (357)
                      |.++|.
T Consensus        85 i~~ag~   90 (245)
T PRK12936         85 VNNAGI   90 (245)
T ss_pred             EECCCC
Confidence            999875

>PRK07985 oxidoreductase; Provisional

Probab=96.08  E-value=0.077  Score=48.00  Aligned_cols=75  Identities=15%  Similarity=0.107  Sum_probs=48.8

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCc--HHHHHHHH---hcCCc---EEEcCCChhHHHH----h---hC
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSD--KKRVEAME---HLGAD---QYLVSSDATRMQE----A---AD  243 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~--~~~~~~~~---~~g~~---~vv~~~~~~~~~~----~---~~  243 (357)
                      +++++||+|+ |++|.++++.+...|++|+++.+++  ++.+.+.+   ..|..   ...|..+.+.+.+    +   .+
T Consensus        48 ~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g  127 (294)
T PRK07985         48 KDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKALG  127 (294)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            5678999987 9999999999988999999876543  22222222   23422   2235555443322    2   23


Q ss_pred             CccEEEEcCCC
Q 018382          244 SLDYIIDTVPA  254 (357)
Q Consensus       244 ~~d~v~d~~g~  254 (357)
                      ++|+++.++|.
T Consensus       128 ~id~lv~~Ag~  138 (294)
T PRK07985        128 GLDIMALVAGK  138 (294)
T ss_pred             CCCEEEECCCC
Confidence            68999998874

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=96.08  E-value=0.055  Score=45.13  Aligned_cols=40  Identities=20%  Similarity=0.233  Sum_probs=32.6

Q ss_pred             eEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHH
Q 018382          183 RGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAME  222 (357)
Q Consensus       183 ~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~  222 (357)
                      +|.|+|+|.+|...++++...|.+|++.+.+++..+...+
T Consensus         1 ~V~ViGaG~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~   40 (180)
T PF02737_consen    1 KVAVIGAGTMGRGIAALFARAGYEVTLYDRSPEALERARK   40 (180)
T ss_dssp             EEEEES-SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHH
T ss_pred             CEEEEcCCHHHHHHHHHHHhCCCcEEEEECChHHHHhhhh
Confidence            5889999999999999998889999999999887655544

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>PRK06198 short chain dehydrogenase; Provisional

Probab=96.07  E-value=0.039  Score=48.67  Aligned_cols=75  Identities=17%  Similarity=0.169  Sum_probs=52.3

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCe-EEEEeCCcHHHHHHHH---hcCCc---EEEcCCChhHHHHhh-------CC
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHH-VTVISSSDKKRVEAME---HLGAD---QYLVSSDATRMQEAA-------DS  244 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~-V~~~~~~~~~~~~~~~---~~g~~---~vv~~~~~~~~~~~~-------~~  244 (357)
                      .+++++|+|+ |++|..+++.+...|++ |+++.+++++......   ..+..   ..+|..+++.+.++.       ++
T Consensus         5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   84 (260)
T PRK06198          5 DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFGR   84 (260)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            5688999987 99999999999999998 9999887665443222   13432   234665554433321       36


Q ss_pred             ccEEEEcCCC
Q 018382          245 LDYIIDTVPA  254 (357)
Q Consensus       245 ~d~v~d~~g~  254 (357)
                      +|++|+++|.
T Consensus        85 id~li~~ag~   94 (260)
T PRK06198         85 LDALVNAAGL   94 (260)
T ss_pred             CCEEEECCCc
Confidence            9999999875

>PRK07904 short chain dehydrogenase; Provisional

Probab=96.06  E-value=0.038  Score=48.80  Aligned_cols=77  Identities=17%  Similarity=0.076  Sum_probs=50.3

Q ss_pred             CCCCeEEEEec-ChHHHHHHHHHHHc-CCeEEEEeCCcHH-HHHHHHh---cCC-c-EE--EcCCChhH----HHHhh--
Q 018382          179 QSGLRGGILGL-GGVGHMGVLIAKAM-GHHVTVISSSDKK-RVEAMEH---LGA-D-QY--LVSSDATR----MQEAA--  242 (357)
Q Consensus       179 ~~~~~VlI~G~-g~~G~~ai~la~~~-g~~V~~~~~~~~~-~~~~~~~---~g~-~-~v--v~~~~~~~----~~~~~--  242 (357)
                      -.+++|||+|+ |++|.++++-+... |++|+++++++++ .+.+.++   .+. + ++  +|..+.+.    ++++.  
T Consensus         6 ~~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   85 (253)
T PRK07904          6 GNPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFAG   85 (253)
T ss_pred             CCCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHhc
Confidence            56778999987 99999999877666 4899999998775 4433222   232 1 22  35544433    23322  


Q ss_pred             CCccEEEEcCCCC
Q 018382          243 DSLDYIIDTVPAN  255 (357)
Q Consensus       243 ~~~d~v~d~~g~~  255 (357)
                      +++|+++.++|..
T Consensus        86 g~id~li~~ag~~   98 (253)
T PRK07904         86 GDVDVAIVAFGLL   98 (253)
T ss_pred             CCCCEEEEeeecC
Confidence            3799999877653

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=96.06  E-value=0.033  Score=49.16  Aligned_cols=74  Identities=12%  Similarity=0.188  Sum_probs=50.4

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHH---HhcCCc---EEEcCCChhHHHHhh-------CCc
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAM---EHLGAD---QYLVSSDATRMQEAA-------DSL  245 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~---~~~g~~---~vv~~~~~~~~~~~~-------~~~  245 (357)
                      .++++||+|+ |++|.+.++.+...|++|+++.+++ +.+.+.   ...+.+   ...|..+.+.+++..       +++
T Consensus        14 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i   92 (258)
T PRK06935         14 DGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHGT-NWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGKI   92 (258)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCc-HHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999987 9999999999999999999998873 322222   223422   224555544333322       368


Q ss_pred             cEEEEcCCC
Q 018382          246 DYIIDTVPA  254 (357)
Q Consensus       246 d~v~d~~g~  254 (357)
                      |+++.++|.
T Consensus        93 d~li~~ag~  101 (258)
T PRK06935         93 DILVNNAGT  101 (258)
T ss_pred             CEEEECCCC
Confidence            999998875

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=96.05  E-value=0.043  Score=49.01  Aligned_cols=75  Identities=17%  Similarity=0.195  Sum_probs=52.1

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCCc-E--EEcCCChhHHHHh-------hCCc
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGAD-Q--YLVSSDATRMQEA-------ADSL  245 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~~-~--vv~~~~~~~~~~~-------~~~~  245 (357)
                      ++++++|+|+ |++|.++++.+...|++|+++.+++++.+.+.+.   .+.. .  ..|..+.+.+..+       .+++
T Consensus         9 ~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   88 (278)
T PRK08277          9 KGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGPC   88 (278)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            5688999987 9999999999988999999999987665544332   2322 1  2344444333322       1379


Q ss_pred             cEEEEcCCC
Q 018382          246 DYIIDTVPA  254 (357)
Q Consensus       246 d~v~d~~g~  254 (357)
                      |++|.++|.
T Consensus        89 d~li~~ag~   97 (278)
T PRK08277         89 DILINGAGG   97 (278)
T ss_pred             CEEEECCCC
Confidence            999999873

>PRK05562 precorrin-2 dehydrogenase; Provisional

Probab=96.05  E-value=0.04  Score=47.33  Aligned_cols=117  Identities=11%  Similarity=-0.007  Sum_probs=70.2

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcH-HHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCCC
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDK-KRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHP  257 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~-~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~  257 (357)
                      -++.+|||+|+|.++.-=++.+...|++|++++..-. ....+.+ .|.-..+. +.  +-..-..++++||-+++.. .
T Consensus        23 ~~~~~VLVVGGG~VA~RK~~~Ll~~gA~VtVVap~i~~el~~l~~-~~~i~~~~-r~--~~~~dl~g~~LViaATdD~-~   97 (223)
T PRK05562         23 SNKIKVLIIGGGKAAFIKGKTFLKKGCYVYILSKKFSKEFLDLKK-YGNLKLIK-GN--YDKEFIKDKHLIVIATDDE-K   97 (223)
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCCCHHHHHHHh-CCCEEEEe-CC--CChHHhCCCcEEEECCCCH-H
Confidence            3578999999999998888888889999999986543 2333333 34322221 11  1112235899999999887 4


Q ss_pred             hH-HHHhccccCCeEEEEccCCCCcccchHHHh-hccceEEEEee
Q 018382          258 LE-PYLSLLKLDGKLILTGVINTPMQFLTPMVM-LGRKAITGSFI  300 (357)
Q Consensus       258 ~~-~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~i~g~~~  300 (357)
                      ++ ......+..+.++.........+|-.+.++ ...+++.-+..
T Consensus        98 vN~~I~~~a~~~~~lvn~vd~p~~~dFi~PAiv~rg~l~IaIST~  142 (223)
T PRK05562         98 LNNKIRKHCDRLYKLYIDCSDYKKGLCIIPYQRSTKNFVFALNTK  142 (223)
T ss_pred             HHHHHHHHHHHcCCeEEEcCCcccCeEEeeeEEecCCEEEEEECC
Confidence            55 444555555777766443333444333333 33455544443

>PRK12747 short chain dehydrogenase; Provisional

Probab=96.04  E-value=0.062  Score=47.21  Aligned_cols=39  Identities=15%  Similarity=0.133  Sum_probs=31.1

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEe-CCcHHHH
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVIS-SSDKKRV  218 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~-~~~~~~~  218 (357)
                      .++++||+|+ +++|.++++.+...|++|++.. +..++.+
T Consensus         3 ~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~   43 (252)
T PRK12747          3 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAE   43 (252)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHH
Confidence            4678999987 9999999999999999998865 4444433

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=96.04  E-value=0.028  Score=57.06  Aligned_cols=110  Identities=16%  Similarity=0.160  Sum_probs=70.9

Q ss_pred             ccceEEEeeCcceEECCCCCCccccccccchhhhhhhhhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeC
Q 018382          134 GFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISS  212 (357)
Q Consensus       134 ~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~  212 (357)
                      ++.+|.-+++...|.+ +..+++++=.-...         .... -.++++||+|+ |++|.++++.+...|++|+++++
T Consensus       378 ~~~~~~~~~~~~~f~~-eyw~~e~~kl~~~~---------~~~~-l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r  446 (676)
T TIGR02632       378 AVSEYVSLPEQEAFDI-EYWPLEEAKLRRMP---------KEKT-LARRVAFVTGGAGGIGRETARRLAAEGAHVVLADL  446 (676)
T ss_pred             cccceecCchhhccch-hhhhhhHHhhccCC---------CCcC-CCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeC
Confidence            3456777777777777 66666665321100         0111 24789999987 99999999988888999999999


Q ss_pred             CcHHHHHHHHhc----CCc----EEEcCCChhHHHHhh-------CCccEEEEcCCC
Q 018382          213 SDKKRVEAMEHL----GAD----QYLVSSDATRMQEAA-------DSLDYIIDTVPA  254 (357)
Q Consensus       213 ~~~~~~~~~~~~----g~~----~vv~~~~~~~~~~~~-------~~~d~v~d~~g~  254 (357)
                      +.++.+.+.+.+    +..    ...|..+.+.+++..       +++|++++++|.
T Consensus       447 ~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~g~iDilV~nAG~  503 (676)
T TIGR02632       447 NLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAYGGVDIVVNNAGI  503 (676)
T ss_pred             CHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhcCCCcEEEECCCC
Confidence            877665443322    321    124555554433322       379999999985

>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase

Probab=96.04  E-value=0.05  Score=46.77  Aligned_cols=95  Identities=23%  Similarity=0.305  Sum_probs=60.8

Q ss_pred             CCCCCeEEEEecChHHHHHHHHHHHcCC--eEEEEeCCcHHHHHHHHh---cCCcE--EEcCCChhHHHHhhCCccEEEE
Q 018382          178 KQSGLRGGILGLGGVGHMGVLIAKAMGH--HVTVISSSDKKRVEAMEH---LGADQ--YLVSSDATRMQEAADSLDYIID  250 (357)
Q Consensus       178 ~~~~~~VlI~G~g~~G~~ai~la~~~g~--~V~~~~~~~~~~~~~~~~---~g~~~--vv~~~~~~~~~~~~~~~d~v~d  250 (357)
                      ++++++||-+|+|. |..++.+++..+.  +|+.++.+++..+.+++.   .|.+.  ++..+..+.. .....||+|+-
T Consensus        75 ~~~~~~VLDiG~Gs-G~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~~d~~~~~-~~~~~fD~Ii~  152 (215)
T TIGR00080        75 LKPGMKVLEIGTGS-GYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIVGDGTQGW-EPLAPYDRIYV  152 (215)
T ss_pred             CCCcCEEEEECCCc-cHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEECCcccCC-cccCCCCEEEE
Confidence            48999999998753 5666677776653  699999888866655543   34322  2211111111 11247999875


Q ss_pred             cCCCCCChHHHHhccccCCeEEEE
Q 018382          251 TVPANHPLEPYLSLLKLDGKLILT  274 (357)
Q Consensus       251 ~~g~~~~~~~~~~~l~~~G~~v~~  274 (357)
                      ............+.|+++|+++..
T Consensus       153 ~~~~~~~~~~~~~~L~~gG~lv~~  176 (215)
T TIGR00080       153 TAAGPKIPEALIDQLKEGGILVMP  176 (215)
T ss_pred             cCCcccccHHHHHhcCcCcEEEEE
Confidence            544443667788999999998764

Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.03  E-value=0.038  Score=48.73  Aligned_cols=74  Identities=14%  Similarity=0.161  Sum_probs=49.2

Q ss_pred             CCCeEEEEecC---hHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCC-c---EEEcCCChhHHH----Hhh---CCc
Q 018382          180 SGLRGGILGLG---GVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGA-D---QYLVSSDATRMQ----EAA---DSL  245 (357)
Q Consensus       180 ~~~~VlI~G~g---~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~-~---~vv~~~~~~~~~----~~~---~~~  245 (357)
                      .++++||+|++   ++|.++++.+...|++|+++.+++...+.+.+ +.. .   ..+|..+.+.++    ++.   +.+
T Consensus         6 ~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   84 (252)
T PRK06079          6 SGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDRMKKSLQK-LVDEEDLLVECDVASDESIERAFATIKERVGKI   84 (252)
T ss_pred             CCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCchHHHHHHHh-hccCceeEEeCCCCCHHHHHHHHHHHHHHhCCC
Confidence            57889999863   89999999998899999999887433333333 321 1   123555544333    222   369


Q ss_pred             cEEEEcCCC
Q 018382          246 DYIIDTVPA  254 (357)
Q Consensus       246 d~v~d~~g~  254 (357)
                      |++++++|.
T Consensus        85 D~lv~nAg~   93 (252)
T PRK06079         85 DGIVHAIAY   93 (252)
T ss_pred             CEEEEcccc
Confidence            999998874

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=96.03  E-value=0.017  Score=45.03  Aligned_cols=82  Identities=24%  Similarity=0.283  Sum_probs=52.1

Q ss_pred             CCCeEEEEecChHHHHHHHHHHHcCCeEEEEe-CCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCCCh
Q 018382          180 SGLRGGILGLGGVGHMGVLIAKAMGHHVTVIS-SSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPL  258 (357)
Q Consensus       180 ~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~-~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~~  258 (357)
                      +.-+|-|+|+|-+|..+...++..|.+|..+. ++.+..+++...++...+.+.      .++....|++|-++.+. .+
T Consensus         9 ~~l~I~iIGaGrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~------~~~~~~aDlv~iavpDd-aI   81 (127)
T PF10727_consen    9 ARLKIGIIGAGRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDL------EEILRDADLVFIAVPDD-AI   81 (127)
T ss_dssp             ---EEEEECTSCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----T------TGGGCC-SEEEE-S-CC-HH
T ss_pred             CccEEEEECCCHHHHHHHHHHHHCCCeEEEEEeCCccccccccccccccccccc------ccccccCCEEEEEechH-HH
Confidence            44678999999999999999999999988875 444455666554565444332      23456899999999998 77


Q ss_pred             HHHHhccccC
Q 018382          259 EPYLSLLKLD  268 (357)
Q Consensus       259 ~~~~~~l~~~  268 (357)
                      ...++.|...
T Consensus        82 ~~va~~La~~   91 (127)
T PF10727_consen   82 AEVAEQLAQY   91 (127)
T ss_dssp             HHHHHHHHCC
T ss_pred             HHHHHHHHHh
Confidence            7766666654

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>PLN02366 spermidine synthase

Probab=96.03  E-value=0.053  Score=49.26  Aligned_cols=95  Identities=13%  Similarity=0.083  Sum_probs=60.5

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCC---------cEEEcCCChhHHHHh-hCCccE
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGA---------DQYLVSSDATRMQEA-ADSLDY  247 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~---------~~vv~~~~~~~~~~~-~~~~d~  247 (357)
                      ...++|||+|+|. |..+..++++-+. +|+++..+++-.+.+++.++.         -.++..+...++++. .+.+|+
T Consensus        90 ~~pkrVLiIGgG~-G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~vi~~Da~~~l~~~~~~~yDv  168 (308)
T PLN02366         90 PNPKKVLVVGGGD-GGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNLHIGDGVEFLKNAPEGTYDA  168 (308)
T ss_pred             CCCCeEEEEcCCc-cHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceEEEEChHHHHHhhccCCCCCE
Confidence            4568899998765 5566777887665 788888877666666664432         112222222345544 347999


Q ss_pred             EEEcCCCC----------CChHHHHhccccCCeEEEE
Q 018382          248 IIDTVPAN----------HPLEPYLSLLKLDGKLILT  274 (357)
Q Consensus       248 v~d~~g~~----------~~~~~~~~~l~~~G~~v~~  274 (357)
                      ||--....          +.++.+.++|+++|.++.-
T Consensus       169 Ii~D~~dp~~~~~~L~t~ef~~~~~~~L~pgGvlv~q  205 (308)
T PLN02366        169 IIVDSSDPVGPAQELFEKPFFESVARALRPGGVVCTQ  205 (308)
T ss_pred             EEEcCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEEC
Confidence            97533221          1366788899999999764

>PRK14982 acyl-ACP reductase; Provisional

Probab=96.02  E-value=0.04  Score=50.56  Aligned_cols=94  Identities=18%  Similarity=0.197  Sum_probs=65.2

Q ss_pred             CCCCeEEEEec-ChHHHHHHHHHH-HcCC-eEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCC
Q 018382          179 QSGLRGGILGL-GGVGHMGVLIAK-AMGH-HVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPAN  255 (357)
Q Consensus       179 ~~~~~VlI~G~-g~~G~~ai~la~-~~g~-~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~  255 (357)
                      -.+++|+|+|+ |.+|..+++.+. ..|+ +++++.+++++...+.++++...+.      .+.+.....|+|+.+++..
T Consensus       153 l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~i~------~l~~~l~~aDiVv~~ts~~  226 (340)
T PRK14982        153 LSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGKIL------SLEEALPEADIVVWVASMP  226 (340)
T ss_pred             cCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhccccHH------hHHHHHccCCEEEECCcCC
Confidence            46789999998 899999888886 4565 8999999888887776656522221      2334455799999988875


Q ss_pred             CChHHHHhccccCCeEEEEccCC
Q 018382          256 HPLEPYLSLLKLDGKLILTGVIN  278 (357)
Q Consensus       256 ~~~~~~~~~l~~~G~~v~~g~~~  278 (357)
                      ..+..-.+.+++.-.+++++.+.
T Consensus       227 ~~~~I~~~~l~~~~~viDiAvPR  249 (340)
T PRK14982        227 KGVEIDPETLKKPCLMIDGGYPK  249 (340)
T ss_pred             cCCcCCHHHhCCCeEEEEecCCC
Confidence            34322334556667777787653

>PRK00811 spermidine synthase; Provisional

Probab=96.00  E-value=0.088  Score=47.37  Aligned_cols=95  Identities=20%  Similarity=0.189  Sum_probs=61.8

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCC-------c---EEEcCCChhHHHHhhCCccE
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGA-------D---QYLVSSDATRMQEAADSLDY  247 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~-------~---~vv~~~~~~~~~~~~~~~d~  247 (357)
                      ...++||++|+|. |..+..+++..+. +|+++..+++-.+.+++.+..       +   .++..+...+++...+.+|+
T Consensus        75 ~~p~~VL~iG~G~-G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~v~~~Da~~~l~~~~~~yDv  153 (283)
T PRK00811         75 PNPKRVLIIGGGD-GGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRVELVIGDGIKFVAETENSFDV  153 (283)
T ss_pred             CCCCEEEEEecCc-hHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCceEEEECchHHHHhhCCCcccE
Confidence            3457899998754 6666777777665 899999988877777765531       1   22222223344443457999


Q ss_pred             EEEcCCCC----------CChHHHHhccccCCeEEEE
Q 018382          248 IIDTVPAN----------HPLEPYLSLLKLDGKLILT  274 (357)
Q Consensus       248 v~d~~g~~----------~~~~~~~~~l~~~G~~v~~  274 (357)
                      |+--....          +.++.+.+.|+++|.++..
T Consensus       154 Ii~D~~dp~~~~~~l~t~ef~~~~~~~L~~gGvlv~~  190 (283)
T PRK00811        154 IIVDSTDPVGPAEGLFTKEFYENCKRALKEDGIFVAQ  190 (283)
T ss_pred             EEECCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEEe
Confidence            97533211          1245678899999998864

>PRK08291 ectoine utilization protein EutC; Validated

Probab=96.00  E-value=0.071  Score=49.11  Aligned_cols=94  Identities=20%  Similarity=0.255  Sum_probs=61.3

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHH-cCC-eEEEEeCCcHHHHHHHHhc----CCcEEEcCCChhHHHHhhCCccEEEEcC
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKA-MGH-HVTVISSSDKKRVEAMEHL----GADQYLVSSDATRMQEAADSLDYIIDTV  252 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~-~g~-~V~~~~~~~~~~~~~~~~~----g~~~vv~~~~~~~~~~~~~~~d~v~d~~  252 (357)
                      +...+++|+|+|..|.+.+..+.. .+. +|.+..++.++.+.+.+.+    |.. +....+   +++.....|+|+.++
T Consensus       130 ~~~~~v~IiGaG~~a~~~~~al~~~~~~~~V~v~~R~~~~a~~l~~~~~~~~g~~-v~~~~d---~~~al~~aDiVi~aT  205 (330)
T PRK08291        130 EDASRAAVIGAGEQARLQLEALTLVRPIREVRVWARDAAKAEAYAADLRAELGIP-VTVARD---VHEAVAGADIIVTTT  205 (330)
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHhhccCce-EEEeCC---HHHHHccCCEEEEee
Confidence            445789999999999987776664 565 7889999988877766544    432 211222   234445789999988


Q ss_pred             CCCCChHHHHhccccCCeEEEEccC
Q 018382          253 PANHPLEPYLSLLKLDGKLILTGVI  277 (357)
Q Consensus       253 g~~~~~~~~~~~l~~~G~~v~~g~~  277 (357)
                      .....+-. ...++++-.+..+|..
T Consensus       206 ~s~~p~i~-~~~l~~g~~v~~vg~d  229 (330)
T PRK08291        206 PSEEPILK-AEWLHPGLHVTAMGSD  229 (330)
T ss_pred             CCCCcEec-HHHcCCCceEEeeCCC
Confidence            77533221 1346776666666653

>PRK07454 short chain dehydrogenase; Provisional

Probab=96.00  E-value=0.043  Score=47.84  Aligned_cols=75  Identities=17%  Similarity=0.203  Sum_probs=52.1

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCCc---EEEcCCChhHHHHh-------hCCc
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGAD---QYLVSSDATRMQEA-------ADSL  245 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~~---~vv~~~~~~~~~~~-------~~~~  245 (357)
                      ..+++||+|+ |.+|..++..+...|.+|+++++++++.+.+.+.   .+..   ...|..+.+.+...       .+.+
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   84 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGCP   84 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            4578999987 9999999999988999999999987765544332   2221   12355554433222       1369


Q ss_pred             cEEEEcCCC
Q 018382          246 DYIIDTVPA  254 (357)
Q Consensus       246 d~v~d~~g~  254 (357)
                      |+++.++|.
T Consensus        85 d~lv~~ag~   93 (241)
T PRK07454         85 DVLINNAGM   93 (241)
T ss_pred             CEEEECCCc
Confidence            999999885

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=95.99  E-value=0.041  Score=50.30  Aligned_cols=74  Identities=22%  Similarity=0.211  Sum_probs=52.3

Q ss_pred             CCeEEEEec-ChHHHHHHHHHHHcC-CeEEEEeCCcHHHHHHHHhcCC--c--E--EEcCCChhHHH----Hh---hCCc
Q 018382          181 GLRGGILGL-GGVGHMGVLIAKAMG-HHVTVISSSDKKRVEAMEHLGA--D--Q--YLVSSDATRMQ----EA---ADSL  245 (357)
Q Consensus       181 ~~~VlI~G~-g~~G~~ai~la~~~g-~~V~~~~~~~~~~~~~~~~~g~--~--~--vv~~~~~~~~~----~~---~~~~  245 (357)
                      ++++||+|+ +++|.++++.+...| ++|+++++++++.+.+.+.++.  .  +  ..|..+.+.++    ++   .+++
T Consensus         3 ~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   82 (314)
T TIGR01289         3 KPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRPL   82 (314)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence            568999987 999999988888889 8999999988877666554431  1  1  24555544332    22   2369


Q ss_pred             cEEEEcCCC
Q 018382          246 DYIIDTVPA  254 (357)
Q Consensus       246 d~v~d~~g~  254 (357)
                      |++++++|.
T Consensus        83 D~lI~nAG~   91 (314)
T TIGR01289        83 DALVCNAAV   91 (314)
T ss_pred             CEEEECCCc
Confidence            999998874

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=95.99  E-value=0.04  Score=48.88  Aligned_cols=75  Identities=15%  Similarity=0.165  Sum_probs=53.0

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCCc---EEEcCCChhHHHHhh-------CCc
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGAD---QYLVSSDATRMQEAA-------DSL  245 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~~---~vv~~~~~~~~~~~~-------~~~  245 (357)
                      .++++||+|+ +++|.+++..+...|++|+++.+++++.+...+.   .|..   ...|..+.+.+++..       +++
T Consensus         9 ~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   88 (265)
T PRK07097          9 KGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGVI   88 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence            5688999987 9999998888888899999999887766544432   2432   234555544333322       368


Q ss_pred             cEEEEcCCC
Q 018382          246 DYIIDTVPA  254 (357)
Q Consensus       246 d~v~d~~g~  254 (357)
                      |+++.++|.
T Consensus        89 d~li~~ag~   97 (265)
T PRK07097         89 DILVNNAGI   97 (265)
T ss_pred             CEEEECCCC
Confidence            999999875

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=95.98  E-value=0.037  Score=50.68  Aligned_cols=75  Identities=16%  Similarity=0.109  Sum_probs=51.9

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCC---cEE--EcCCChhHHHHhhCCccEEEE
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGA---DQY--LVSSDATRMQEAADSLDYIID  250 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~---~~v--v~~~~~~~~~~~~~~~d~v~d  250 (357)
                      .|++|||+|+ |.+|..+++.+...|.+|+++.++..+.+...+.   .+.   -.+  .|..+.+.+.++..++|+||.
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih   83 (322)
T PLN02986          4 GGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCDAVFH   83 (322)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCCEEEE
Confidence            4689999987 9999999998888899999888876543322221   111   111  244455556666668999999


Q ss_pred             cCCC
Q 018382          251 TVPA  254 (357)
Q Consensus       251 ~~g~  254 (357)
                      +++.
T Consensus        84 ~A~~   87 (322)
T PLN02986         84 TASP   87 (322)
T ss_pred             eCCC
Confidence            8864

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=95.97  E-value=0.046  Score=48.14  Aligned_cols=75  Identities=20%  Similarity=0.217  Sum_probs=52.3

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCCc---EEEcCCChhHHHH----hh---CCc
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGAD---QYLVSSDATRMQE----AA---DSL  245 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~~---~vv~~~~~~~~~~----~~---~~~  245 (357)
                      ++++++|+|+ |++|..+++.+...|++|+++.+++++.+.+.++   .+..   ...|..+.+.+.+    +.   +.+
T Consensus        10 ~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   89 (256)
T PRK06124         10 AGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGRL   89 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            5789999987 9999999998888899999999987665443321   3421   1235555443332    21   368


Q ss_pred             cEEEEcCCC
Q 018382          246 DYIIDTVPA  254 (357)
Q Consensus       246 d~v~d~~g~  254 (357)
                      |+++.++|.
T Consensus        90 d~vi~~ag~   98 (256)
T PRK06124         90 DILVNNVGA   98 (256)
T ss_pred             CEEEECCCC
Confidence            999999885

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=95.97  E-value=0.042  Score=51.02  Aligned_cols=87  Identities=15%  Similarity=0.059  Sum_probs=57.1

Q ss_pred             hhhhhhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHH----HHHHHhcCC------cE-EEcCCC
Q 018382          167 TVFSPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKR----VEAMEHLGA------DQ-YLVSSD  234 (357)
Q Consensus       167 ta~~~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~----~~~~~~~g~------~~-vv~~~~  234 (357)
                      |||.-|+..-. -+.++|||+|+ |-+|..++..+...|.+|+++++.....    .......+.      .. ..|..+
T Consensus         2 ~~~~~~~~~~~-~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d   80 (348)
T PRK15181          2 TAYEELRTKLV-LAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRK   80 (348)
T ss_pred             chhhhhhhccc-ccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCC
Confidence            56665544444 56689999987 9999999999998899999998754321    111111111      11 125555


Q ss_pred             hhHHHHhhCCccEEEEcCCC
Q 018382          235 ATRMQEAADSLDYIIDTVPA  254 (357)
Q Consensus       235 ~~~~~~~~~~~d~v~d~~g~  254 (357)
                      .+.+..+..++|+||.+++.
T Consensus        81 ~~~l~~~~~~~d~ViHlAa~  100 (348)
T PRK15181         81 FTDCQKACKNVDYVLHQAAL  100 (348)
T ss_pred             HHHHHHHhhCCCEEEECccc
Confidence            55566666689999998864

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=95.97  E-value=0.04  Score=48.18  Aligned_cols=76  Identities=18%  Similarity=0.238  Sum_probs=51.2

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCCc-E--EEcCCChhHHHHhh-------CCc
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGAD-Q--YLVSSDATRMQEAA-------DSL  245 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~~-~--vv~~~~~~~~~~~~-------~~~  245 (357)
                      .++++||+|+ |.+|..++..+...|++|++++++.++.....+.   .+.+ .  ..|..+.+.+.+..       ..+
T Consensus         5 ~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   84 (251)
T PRK12826          5 EGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGRL   84 (251)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            4678999987 9999999998888899999999986654333221   2321 1  23555544333322       368


Q ss_pred             cEEEEcCCCC
Q 018382          246 DYIIDTVPAN  255 (357)
Q Consensus       246 d~v~d~~g~~  255 (357)
                      |++|.+++..
T Consensus        85 d~vi~~ag~~   94 (251)
T PRK12826         85 DILVANAGIF   94 (251)
T ss_pred             CEEEECCCCC
Confidence            9999988653

>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family

Probab=95.97  E-value=0.041  Score=47.24  Aligned_cols=96  Identities=16%  Similarity=0.096  Sum_probs=60.6

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEE--------------cCCChhHH---HHh
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYL--------------VSSDATRM---QEA  241 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv--------------~~~~~~~~---~~~  241 (357)
                      .++.+||+.|+|. |.-++-+|. .|.+|++++.++...+.+.++-+.....              +....+..   ...
T Consensus        33 ~~~~rvLd~GCG~-G~da~~LA~-~G~~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~  110 (213)
T TIGR03840        33 PAGARVFVPLCGK-SLDLAWLAE-QGHRVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALTAAD  110 (213)
T ss_pred             CCCCeEEEeCCCc-hhHHHHHHh-CCCeEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCCccc
Confidence            4678999999863 666777765 5999999999999887754434421100              00000110   011


Q ss_pred             hCCccEEEEcCCC--------CCChHHHHhccccCCeEEEEcc
Q 018382          242 ADSLDYIIDTVPA--------NHPLEPYLSLLKLDGKLILTGV  276 (357)
Q Consensus       242 ~~~~d~v~d~~g~--------~~~~~~~~~~l~~~G~~v~~g~  276 (357)
                      ...+|.|+|+..-        ...+....+.|+|+|+++.++.
T Consensus       111 ~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpgG~~ll~~~  153 (213)
T TIGR03840       111 LGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPGARQLLITL  153 (213)
T ss_pred             CCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCCCeEEEEEE
Confidence            2358999996531        1245678889999998776654

Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.96  E-value=0.049  Score=48.98  Aligned_cols=96  Identities=18%  Similarity=0.201  Sum_probs=71.6

Q ss_pred             ccccchhhhhhhhhhccCCCCCCCeEEEEe-cChHHHHHHHHHHHcCCeEEEEe-CCcHHHHHHHHhcCCcEEEcCCChh
Q 018382          159 APLLCAGVTVFSPLSHFGLKQSGLRGGILG-LGGVGHMGVLIAKAMGHHVTVIS-SSDKKRVEAMEHLGADQYLVSSDAT  236 (357)
Q Consensus       159 a~~~~~~~ta~~~l~~~~~~~~~~~VlI~G-~g~~G~~ai~la~~~g~~V~~~~-~~~~~~~~~~~~~g~~~vv~~~~~~  236 (357)
                      +.+||.....+..|+....--.|++|+|+| .+.+|.-++.++...|+.|++.. ++.+                     
T Consensus       136 ~~~PcTp~ai~~ll~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~~---------------------  194 (296)
T PRK14188        136 ALVPCTPLGCMMLLRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTRD---------------------  194 (296)
T ss_pred             CCcCCCHHHHHHHHHHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCCC---------------------
Confidence            456777666666676665446899999999 59999999999999999999874 3311                     


Q ss_pred             HHHHhhCCccEEEEcCCCCCChHHHHhccccCCeEEEEccCC
Q 018382          237 RMQEAADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVIN  278 (357)
Q Consensus       237 ~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~  278 (357)
                       +++.....|+|+-++|....+...  .++++..++++|...
T Consensus       195 -l~e~~~~ADIVIsavg~~~~v~~~--~lk~GavVIDvGin~  233 (296)
T PRK14188        195 -LPAVCRRADILVAAVGRPEMVKGD--WIKPGATVIDVGINR  233 (296)
T ss_pred             -HHHHHhcCCEEEEecCChhhcchh--eecCCCEEEEcCCcc
Confidence             233445689999999998555443  388988999888643

>PRK06940 short chain dehydrogenase; Provisional

Probab=95.96  E-value=0.043  Score=49.07  Aligned_cols=73  Identities=18%  Similarity=0.217  Sum_probs=49.7

Q ss_pred             CeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc---CCc---EEEcCCChhHHHHh----h--CCccEEE
Q 018382          182 LRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL---GAD---QYLVSSDATRMQEA----A--DSLDYII  249 (357)
Q Consensus       182 ~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~---g~~---~vv~~~~~~~~~~~----~--~~~d~v~  249 (357)
                      ++++|+|+|++|.+++..+. .|++|+++++++++.+.+.+++   |.+   ...|..+.+.+..+    .  +++|+++
T Consensus         3 k~~lItGa~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~li   81 (275)
T PRK06940          3 EVVVVIGAGGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVTGLV   81 (275)
T ss_pred             CEEEEECCChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCCEEE
Confidence            56788898999999888885 7999999999877655443322   322   12355554433322    1  3699999


Q ss_pred             EcCCCC
Q 018382          250 DTVPAN  255 (357)
Q Consensus       250 d~~g~~  255 (357)
                      +++|..
T Consensus        82 ~nAG~~   87 (275)
T PRK06940         82 HTAGVS   87 (275)
T ss_pred             ECCCcC
Confidence            999853

>PRK06914 short chain dehydrogenase; Provisional

Probab=95.96  E-value=0.037  Score=49.51  Aligned_cols=74  Identities=15%  Similarity=0.190  Sum_probs=51.3

Q ss_pred             CCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCC---cE--EEcCCChhHHHH---hh---CCc
Q 018382          181 GLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGA---DQ--YLVSSDATRMQE---AA---DSL  245 (357)
Q Consensus       181 ~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~---~~--vv~~~~~~~~~~---~~---~~~  245 (357)
                      ++++||+|+ |.+|...+..+...|++|++++++.++.+.+.+.   .+.   .+  ..|..+++.++.   +.   +++
T Consensus         3 ~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~i   82 (280)
T PRK06914          3 KKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHNFQLVLKEIGRI   82 (280)
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHHHHHHHHhcCCe
Confidence            567999987 9999999999888899999999887765444331   221   11  235556544332   21   368


Q ss_pred             cEEEEcCCC
Q 018382          246 DYIIDTVPA  254 (357)
Q Consensus       246 d~v~d~~g~  254 (357)
                      |+++.++|.
T Consensus        83 d~vv~~ag~   91 (280)
T PRK06914         83 DLLVNNAGY   91 (280)
T ss_pred             eEEEECCcc
Confidence            999999875

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=95.96  E-value=0.032  Score=51.14  Aligned_cols=75  Identities=17%  Similarity=0.108  Sum_probs=52.3

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCC---cEE--EcCCChhHHHHhhCCccEEEE
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGA---DQY--LVSSDATRMQEAADSLDYIID  250 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~---~~v--v~~~~~~~~~~~~~~~d~v~d  250 (357)
                      .+++|||+|+ |.+|..+++.+...|.+|++++++..+.......   .+.   .+.  .|..+.+.+++...++|+||.
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih   83 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDGCETVFH   83 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCCEEEE
Confidence            5789999987 9999999999988899999887776543322111   121   122  255555556666668999999


Q ss_pred             cCCC
Q 018382          251 TVPA  254 (357)
Q Consensus       251 ~~g~  254 (357)
                      +++.
T Consensus        84 ~A~~   87 (325)
T PLN02989         84 TASP   87 (325)
T ss_pred             eCCC
Confidence            9874

>COG2423 Predicted ornithine cyclodeaminase, mu-crystallin homolog [Amino acid transport and metabolism]

Probab=95.96  E-value=0.068  Score=48.82  Aligned_cols=103  Identities=17%  Similarity=0.170  Sum_probs=70.0

Q ss_pred             hccCCCCCCCeEEEEecChHHHHHHHHHHHc-CC-eEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEE
Q 018382          173 SHFGLKQSGLRGGILGLGGVGHMGVLIAKAM-GH-HVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIID  250 (357)
Q Consensus       173 ~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~-g~-~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d  250 (357)
                      +.+.+ +...++.|+|+|..+.+.++.++.. +. +|.+..++++..+.+.+.+......+....+..++...+.|+|+.
T Consensus       123 ~~LA~-~da~~laiIGaG~qA~~ql~a~~~v~~~~~I~i~~r~~~~~e~~a~~l~~~~~~~v~a~~s~~~av~~aDiIvt  201 (330)
T COG2423         123 KYLAR-KDASTLAIIGAGAQARTQLEALKAVRDIREIRVYSRDPEAAEAFAARLRKRGGEAVGAADSAEEAVEGADIVVT  201 (330)
T ss_pred             HHhcc-CCCcEEEEECCcHHHHHHHHHHHhhCCccEEEEEcCCHHHHHHHHHHHHhhcCccceeccCHHHHhhcCCEEEE
Confidence            44454 5567889999999999988888754 66 899999998877666543332211111122234566678999999


Q ss_pred             cCCCCCChHHHHhccccCCeEEEEccC
Q 018382          251 TVPANHPLEPYLSLLKLDGKLILTGVI  277 (357)
Q Consensus       251 ~~g~~~~~~~~~~~l~~~G~~v~~g~~  277 (357)
                      |+.+...+ ...+.++++-.+..+|..
T Consensus       202 ~T~s~~Pi-l~~~~l~~G~hI~aiGad  227 (330)
T COG2423         202 ATPSTEPV-LKAEWLKPGTHINAIGAD  227 (330)
T ss_pred             ecCCCCCe-ecHhhcCCCcEEEecCCC
Confidence            99887432 344678888888888764

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.96  E-value=0.0085  Score=57.77  Aligned_cols=93  Identities=12%  Similarity=0.075  Sum_probs=59.7

Q ss_pred             cCCCCCCCeEE----EEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCc-EEEcCCChhHHHHhhCCccEE
Q 018382          175 FGLKQSGLRGG----ILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGAD-QYLVSSDATRMQEAADSLDYI  248 (357)
Q Consensus       175 ~~~~~~~~~Vl----I~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~~~~~~d~v  248 (357)
                      ..++++|+.+|    |+|+ |++|.+++|+++..|++|+.+.+.+.+...... .+.+ .++|.+.....+++...+   
T Consensus        28 l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~l~~~~---  103 (450)
T PRK08261         28 LRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGYDVVANNDGGLTWAAGWG-DRFGALVFDATGITDPADLKALY---  103 (450)
T ss_pred             ccCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCCeeeecCccccccccCcC-CcccEEEEECCCCCCHHHHHHHH---
Confidence            45568888888    7765 999999999999999999998766553322221 3333 455554422222211100   


Q ss_pred             EEcCCCCCChHHHHhccccCCeEEEEccCC
Q 018382          249 IDTVPANHPLEPYLSLLKLDGKLILTGVIN  278 (357)
Q Consensus       249 ~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~  278 (357)
                             ..+...++.|.++|+++.++...
T Consensus       104 -------~~~~~~l~~l~~~griv~i~s~~  126 (450)
T PRK08261        104 -------EFFHPVLRSLAPCGRVVVLGRPP  126 (450)
T ss_pred             -------HHHHHHHHhccCCCEEEEEcccc
Confidence                   14455677888899999887654

>PRK12937 short chain dehydrogenase; Provisional

Probab=95.95  E-value=0.12  Score=44.95  Aligned_cols=75  Identities=17%  Similarity=0.139  Sum_probs=48.9

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHH-HHHHHH---hcCCc-E--EEcCCChhHHHHh-------hCC
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKK-RVEAME---HLGAD-Q--YLVSSDATRMQEA-------ADS  244 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~-~~~~~~---~~g~~-~--vv~~~~~~~~~~~-------~~~  244 (357)
                      +++++||+|+ |++|..+++.+...|++|+++.++... .+.+.+   ..+.. +  ..|..+.+.+++.       .++
T Consensus         4 ~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   83 (245)
T PRK12937          4 SNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFGR   83 (245)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            5688999987 999999999999999998887765432 222221   13421 1  2344454333322       237


Q ss_pred             ccEEEEcCCC
Q 018382          245 LDYIIDTVPA  254 (357)
Q Consensus       245 ~d~v~d~~g~  254 (357)
                      +|++|.++|.
T Consensus        84 id~vi~~ag~   93 (245)
T PRK12937         84 IDVLVNNAGV   93 (245)
T ss_pred             CCEEEECCCC
Confidence            9999999875

>PRK06101 short chain dehydrogenase; Provisional

Probab=95.93  E-value=0.054  Score=47.29  Aligned_cols=73  Identities=15%  Similarity=-0.003  Sum_probs=50.4

Q ss_pred             CeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCc--EEEcCCChhHHHHhh----CCccEEEEcCCC
Q 018382          182 LRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGAD--QYLVSSDATRMQEAA----DSLDYIIDTVPA  254 (357)
Q Consensus       182 ~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~--~vv~~~~~~~~~~~~----~~~d~v~d~~g~  254 (357)
                      .+++|+|+ |++|...+..+...|++|+++++++++.+.+.+.....  ...|..+.+.++++.    ...|+++.++|.
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i~~ag~   81 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQSANIFTLAFDVTDHPGTKAALSQLPFIPELWIFNAGD   81 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCCCeEEEeeCCCHHHHHHHHHhcccCCCEEEEcCcc
Confidence            56899987 99999988888888999999999888776665532211  234566655444432    246777766653

>PRK07074 short chain dehydrogenase; Provisional

Probab=95.93  E-value=0.05  Score=47.94  Aligned_cols=75  Identities=19%  Similarity=0.178  Sum_probs=52.9

Q ss_pred             CCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcC---Cc-EEEcCCChhHHHHhh-------CCccEE
Q 018382          181 GLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLG---AD-QYLVSSDATRMQEAA-------DSLDYI  248 (357)
Q Consensus       181 ~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g---~~-~vv~~~~~~~~~~~~-------~~~d~v  248 (357)
                      ++++||+|+ |.+|..++..+...|++|++++++.++.+.+.+.+.   .. ...|..+.+.+....       +++|++
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v   81 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDVL   81 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            468999987 999999998888889999999998877665554342   11 134555554433221       268999


Q ss_pred             EEcCCCC
Q 018382          249 IDTVPAN  255 (357)
Q Consensus       249 ~d~~g~~  255 (357)
                      +.+.|..
T Consensus        82 i~~ag~~   88 (257)
T PRK07074         82 VANAGAA   88 (257)
T ss_pred             EECCCCC
Confidence            9998753

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=95.93  E-value=0.057  Score=47.67  Aligned_cols=75  Identities=24%  Similarity=0.231  Sum_probs=49.7

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHH--hcCCc---EEEcCCChhHHH----Hh---hCCcc
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAME--HLGAD---QYLVSSDATRMQ----EA---ADSLD  246 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~--~~g~~---~vv~~~~~~~~~----~~---~~~~d  246 (357)
                      +++++||+|+ |++|.++++.+...|++|+++++++...+...+  ..+.+   ...|..+.+.+.    ++   .+++|
T Consensus         7 ~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   86 (260)
T PRK12823          7 AGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRID   86 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCCe
Confidence            4688999987 999999999998899999999887532222211  13432   224555543322    22   13799


Q ss_pred             EEEEcCCC
Q 018382          247 YIIDTVPA  254 (357)
Q Consensus       247 ~v~d~~g~  254 (357)
                      ++++++|.
T Consensus        87 ~lv~nAg~   94 (260)
T PRK12823         87 VLINNVGG   94 (260)
T ss_pred             EEEECCcc
Confidence            99999873

>PLN02928 oxidoreductase family protein

Probab=95.92  E-value=0.046  Score=50.67  Aligned_cols=94  Identities=19%  Similarity=0.153  Sum_probs=62.5

Q ss_pred             CCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcC----C-cEEEc-CCChhHHHHhhCCccEEEEcCC
Q 018382          180 SGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLG----A-DQYLV-SSDATRMQEAADSLDYIIDTVP  253 (357)
Q Consensus       180 ~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g----~-~~vv~-~~~~~~~~~~~~~~d~v~d~~g  253 (357)
                      .|+++.|+|.|.+|..+++.++.+|++|++..++..+... .. ++    . ....+ ......+.++....|+|+.++.
T Consensus       158 ~gktvGIiG~G~IG~~vA~~l~afG~~V~~~dr~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~L~ell~~aDiVvl~lP  235 (347)
T PLN02928        158 FGKTVFILGYGAIGIELAKRLRPFGVKLLATRRSWTSEPE-DG-LLIPNGDVDDLVDEKGGHEDIYEFAGEADIVVLCCT  235 (347)
T ss_pred             CCCEEEEECCCHHHHHHHHHHhhCCCEEEEECCCCChhhh-hh-hccccccccccccccCcccCHHHHHhhCCEEEECCC
Confidence            5789999999999999999999999999999876332111 10 11    0 00110 0112234556667999998876


Q ss_pred             CC----CCh-HHHHhccccCCeEEEEc
Q 018382          254 AN----HPL-EPYLSLLKLDGKLILTG  275 (357)
Q Consensus       254 ~~----~~~-~~~~~~l~~~G~~v~~g  275 (357)
                      ..    ..+ ...++.|+++..+|.++
T Consensus       236 lt~~T~~li~~~~l~~Mk~ga~lINva  262 (347)
T PLN02928        236 LTKETAGIVNDEFLSSMKKGALLVNIA  262 (347)
T ss_pred             CChHhhcccCHHHHhcCCCCeEEEECC
Confidence            42    122 46788899998888774

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=95.92  E-value=0.039  Score=51.24  Aligned_cols=75  Identities=17%  Similarity=0.159  Sum_probs=51.5

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcC----Cc-EEEcCCChhHHHHhhC--CccEEEEc
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLG----AD-QYLVSSDATRMQEAAD--SLDYIIDT  251 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g----~~-~vv~~~~~~~~~~~~~--~~d~v~d~  251 (357)
                      ++++|||+|+ |.+|..+++.+...|.+|+++++++.......+.++    .. ...|..+.+.+.++..  ++|+||.+
T Consensus         3 ~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vih~   82 (349)
T TIGR02622         3 QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEFKPEIVFHL   82 (349)
T ss_pred             CCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhcCCCEEEEC
Confidence            4688999987 999999999999999999999877654332221122    11 2235555555555443  58999999


Q ss_pred             CCC
Q 018382          252 VPA  254 (357)
Q Consensus       252 ~g~  254 (357)
                      ++.
T Consensus        83 A~~   85 (349)
T TIGR02622        83 AAQ   85 (349)
T ss_pred             Ccc
Confidence            874

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.90  E-value=0.045  Score=48.57  Aligned_cols=75  Identities=13%  Similarity=0.162  Sum_probs=49.4

Q ss_pred             CCCeEEEEec---ChHHHHHHHHHHHcCCeEEEEeCCcH---HHHHHHHhcCCc--EEEcCCChhHHHHh----h---CC
Q 018382          180 SGLRGGILGL---GGVGHMGVLIAKAMGHHVTVISSSDK---KRVEAMEHLGAD--QYLVSSDATRMQEA----A---DS  244 (357)
Q Consensus       180 ~~~~VlI~G~---g~~G~~ai~la~~~g~~V~~~~~~~~---~~~~~~~~~g~~--~vv~~~~~~~~~~~----~---~~  244 (357)
                      +++++||+|+   +++|.+.++.+...|++|+++.+.+.   +.+.+.+..|..  ...|..+.+.++++    .   ++
T Consensus         5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   84 (261)
T PRK08690          5 QGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWDG   84 (261)
T ss_pred             CCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            5688999983   58999999988889999998766532   223333323422  23455555443332    2   37


Q ss_pred             ccEEEEcCCC
Q 018382          245 LDYIIDTVPA  254 (357)
Q Consensus       245 ~d~v~d~~g~  254 (357)
                      +|++++++|.
T Consensus        85 iD~lVnnAG~   94 (261)
T PRK08690         85 LDGLVHSIGF   94 (261)
T ss_pred             CcEEEECCcc
Confidence            9999999875

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=95.89  E-value=0.034  Score=45.33  Aligned_cols=74  Identities=22%  Similarity=0.204  Sum_probs=47.4

Q ss_pred             CeEEEEec-ChHHHHHHHHHHHcCC-eEEEEeCC--cHHHHHHHHh---cCCcE-E--EcCCChhHHHHh-------hCC
Q 018382          182 LRGGILGL-GGVGHMGVLIAKAMGH-HVTVISSS--DKKRVEAMEH---LGADQ-Y--LVSSDATRMQEA-------ADS  244 (357)
Q Consensus       182 ~~VlI~G~-g~~G~~ai~la~~~g~-~V~~~~~~--~~~~~~~~~~---~g~~~-v--v~~~~~~~~~~~-------~~~  244 (357)
                      +++||+|+ +++|.+.++.+...|. +|+++.++  .++.+.+..+   .+... +  .|..+.+.++++       .+.
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP   80 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            46899987 9999998888887777 77777877  3444433222   34321 2  244444333322       247


Q ss_pred             ccEEEEcCCCC
Q 018382          245 LDYIIDTVPAN  255 (357)
Q Consensus       245 ~d~v~d~~g~~  255 (357)
                      +|++|.++|..
T Consensus        81 ld~li~~ag~~   91 (167)
T PF00106_consen   81 LDILINNAGIF   91 (167)
T ss_dssp             ESEEEEECSCT
T ss_pred             ccccccccccc
Confidence            99999998875

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK08703 short chain dehydrogenase; Provisional

Probab=95.88  E-value=0.061  Score=46.83  Aligned_cols=43  Identities=21%  Similarity=0.200  Sum_probs=36.2

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHH
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAME  222 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~  222 (357)
                      ++++++|+|+ |++|...++.+...|++|+++++++++.+.+.+
T Consensus         5 ~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~   48 (239)
T PRK08703          5 SDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYD   48 (239)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHH
Confidence            4678999987 999999999998899999999999877655433

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.87  E-value=0.049  Score=48.39  Aligned_cols=75  Identities=15%  Similarity=0.154  Sum_probs=49.2

Q ss_pred             CCCeEEEEecC---hHHHHHHHHHHHcCCeEEEEeCCc---HHHHHHHHhcCCc--EEEcCCChhHHHHh----h---CC
Q 018382          180 SGLRGGILGLG---GVGHMGVLIAKAMGHHVTVISSSD---KKRVEAMEHLGAD--QYLVSSDATRMQEA----A---DS  244 (357)
Q Consensus       180 ~~~~VlI~G~g---~~G~~ai~la~~~g~~V~~~~~~~---~~~~~~~~~~g~~--~vv~~~~~~~~~~~----~---~~  244 (357)
                      .++++||+|++   ++|.++++.+...|++|++..+++   +..+.+..+.+..  ...|..+++.++.+    .   +.
T Consensus         5 ~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   84 (262)
T PRK07984          5 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWPK   84 (262)
T ss_pred             CCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcCC
Confidence            56889999873   899999888888899999887763   2223333323321  22466665443332    2   36


Q ss_pred             ccEEEEcCCC
Q 018382          245 LDYIIDTVPA  254 (357)
Q Consensus       245 ~d~v~d~~g~  254 (357)
                      +|++++++|-
T Consensus        85 iD~linnAg~   94 (262)
T PRK07984         85 FDGFVHSIGF   94 (262)
T ss_pred             CCEEEECCcc
Confidence            8999999873

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=95.87  E-value=0.047  Score=48.10  Aligned_cols=75  Identities=15%  Similarity=0.215  Sum_probs=52.7

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCCc---EEEcCCChhHHHHh-------hCCc
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGAD---QYLVSSDATRMQEA-------ADSL  245 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~~---~vv~~~~~~~~~~~-------~~~~  245 (357)
                      .++++||+|+ +++|..++..+...|++|+++++++++.+.+.+.   .+.+   ...|..+.+.+++.       .+.+
T Consensus        10 ~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   89 (255)
T PRK06113         10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLGKV   89 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            4789999987 9999999998888999999999887765544321   3322   12455555443322       2368


Q ss_pred             cEEEEcCCC
Q 018382          246 DYIIDTVPA  254 (357)
Q Consensus       246 d~v~d~~g~  254 (357)
                      |+++.++|.
T Consensus        90 d~li~~ag~   98 (255)
T PRK06113         90 DILVNNAGG   98 (255)
T ss_pred             CEEEECCCC
Confidence            999999874

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=95.86  E-value=0.047  Score=49.74  Aligned_cols=76  Identities=21%  Similarity=0.257  Sum_probs=54.7

Q ss_pred             CCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcC----Cc----EEEcCCChhHHHHh-------h
Q 018382          179 QSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLG----AD----QYLVSSDATRMQEA-------A  242 (357)
Q Consensus       179 ~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g----~~----~vv~~~~~~~~~~~-------~  242 (357)
                      -.+.+++|+|+ +++|..++.-+...|++|+.++|+.++.+.+.++..    ..    +.+|..+...++..       .
T Consensus        33 ~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~~  112 (314)
T KOG1208|consen   33 LSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKKE  112 (314)
T ss_pred             CCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhcC
Confidence            45678899998 999999999999999999999999877666655443    22    23455554333322       2


Q ss_pred             CCccEEEEcCCC
Q 018382          243 DSLDYIIDTVPA  254 (357)
Q Consensus       243 ~~~d~v~d~~g~  254 (357)
                      .+.|+.++.+|-
T Consensus       113 ~~ldvLInNAGV  124 (314)
T KOG1208|consen  113 GPLDVLINNAGV  124 (314)
T ss_pred             CCccEEEeCccc
Confidence            378999987765

>PRK06701 short chain dehydrogenase; Provisional

Probab=95.86  E-value=0.096  Score=47.28  Aligned_cols=76  Identities=18%  Similarity=0.228  Sum_probs=49.4

Q ss_pred             CCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHH-HHHHH---HhcCCcE---EEcCCChhHHHHh----h---C
Q 018382          179 QSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKK-RVEAM---EHLGADQ---YLVSSDATRMQEA----A---D  243 (357)
Q Consensus       179 ~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~-~~~~~---~~~g~~~---vv~~~~~~~~~~~----~---~  243 (357)
                      -+++++||+|+ |++|..+++.+...|++|+++.+++++ .+...   +..|...   ..|..+.+.+.++    .   .
T Consensus        44 ~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~  123 (290)
T PRK06701         44 LKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRELG  123 (290)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            35788999987 999999998888889999998876532 22221   2134322   2344444433322    1   3


Q ss_pred             CccEEEEcCCC
Q 018382          244 SLDYIIDTVPA  254 (357)
Q Consensus       244 ~~d~v~d~~g~  254 (357)
                      .+|++|.++|.
T Consensus       124 ~iD~lI~~Ag~  134 (290)
T PRK06701        124 RLDILVNNAAF  134 (290)
T ss_pred             CCCEEEECCcc
Confidence            68999998875

>PRK06179 short chain dehydrogenase; Provisional

Probab=95.86  E-value=0.028  Score=49.94  Aligned_cols=71  Identities=17%  Similarity=0.199  Sum_probs=50.1

Q ss_pred             CCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCc-EEEcCCChhHHHHhh-------CCccEEEEc
Q 018382          181 GLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGAD-QYLVSSDATRMQEAA-------DSLDYIIDT  251 (357)
Q Consensus       181 ~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~~~-------~~~d~v~d~  251 (357)
                      +++++|+|+ |++|..+++.+...|++|++++++.++....   .+.. ...|..+.+.++++.       +.+|++|++
T Consensus         4 ~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~---~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~~   80 (270)
T PRK06179          4 SKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAPI---PGVELLELDVTDDASVQAAVDEVIARAGRIDVLVNN   80 (270)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhcccc---CCCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEEC
Confidence            467999987 9999999998888899999999876554321   2222 234555654443332       368999999


Q ss_pred             CCC
Q 018382          252 VPA  254 (357)
Q Consensus       252 ~g~  254 (357)
                      +|.
T Consensus        81 ag~   83 (270)
T PRK06179         81 AGV   83 (270)
T ss_pred             CCC
Confidence            985

>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=95.86  E-value=0.15  Score=46.54  Aligned_cols=89  Identities=17%  Similarity=0.114  Sum_probs=55.5

Q ss_pred             CCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh----------cCCc--EEEc-CCChhHHHHhhCCccE
Q 018382          181 GLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH----------LGAD--QYLV-SSDATRMQEAADSLDY  247 (357)
Q Consensus       181 ~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~----------~g~~--~vv~-~~~~~~~~~~~~~~d~  247 (357)
                      -++|.|+|+|.+|...++.+...|.+|++.+.+++..+.+.+.          .|..  .... ..-.+.+++...+.|+
T Consensus         7 i~~VaVIGaG~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~l~~av~~aDl   86 (321)
T PRK07066          7 IKTFAAIGSGVIGSGWVARALAHGLDVVAWDPAPGAEAALRANVANAWPALERQGLAPGASPARLRFVATIEACVADADF   86 (321)
T ss_pred             CCEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCChhhHHhhceecCCHHHHhcCCCE
Confidence            3679999999999999999989999999999987765443221          1110  0000 0000123344468999


Q ss_pred             EEEcCCCCCC-----hHHHHhccccCC
Q 018382          248 IIDTVPANHP-----LEPYLSLLKLDG  269 (357)
Q Consensus       248 v~d~~g~~~~-----~~~~~~~l~~~G  269 (357)
                      |++++.....     +..+.+.++++-
T Consensus        87 ViEavpE~l~vK~~lf~~l~~~~~~~a  113 (321)
T PRK07066         87 IQESAPEREALKLELHERISRAAKPDA  113 (321)
T ss_pred             EEECCcCCHHHHHHHHHHHHHhCCCCe
Confidence            9999987532     233444555554

>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]

Probab=95.85  E-value=0.039  Score=49.39  Aligned_cols=129  Identities=19%  Similarity=0.276  Sum_probs=75.4

Q ss_pred             CcceEECCCCCCccccccccchhhhhh--hhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHH
Q 018382          143 QKFVVKIPDGMALEQAAPLLCAGVTVF--SPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVE  219 (357)
Q Consensus       143 ~~~~~~lP~~l~~~~aa~~~~~~~ta~--~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~  219 (357)
                      .+.++++.+++.+-..-    ...|++  .+|....  +++++||=+|+|. |.++|..++. |+ +|++++-.+-..+.
T Consensus       129 ~~~~i~lDPGlAFGTG~----HpTT~lcL~~Le~~~--~~g~~vlDvGcGS-GILaIAa~kL-GA~~v~g~DiDp~AV~a  200 (300)
T COG2264         129 DELNIELDPGLAFGTGT----HPTTSLCLEALEKLL--KKGKTVLDVGCGS-GILAIAAAKL-GAKKVVGVDIDPQAVEA  200 (300)
T ss_pred             CceEEEEccccccCCCC----ChhHHHHHHHHHHhh--cCCCEEEEecCCh-hHHHHHHHHc-CCceEEEecCCHHHHHH
Confidence            36678887777654332    223322  2333333  5999999999853 6666666655 77 79999877766555


Q ss_pred             HHHhcCCcEEE--c-CCChhHHHHhh-CCccEEEEcC-CCC--CChHHHHhccccCCeEEEEccCCC
Q 018382          220 AMEHLGADQYL--V-SSDATRMQEAA-DSLDYIIDTV-PAN--HPLEPYLSLLKLDGKLILTGVINT  279 (357)
Q Consensus       220 ~~~~~g~~~vv--~-~~~~~~~~~~~-~~~d~v~d~~-g~~--~~~~~~~~~l~~~G~~v~~g~~~~  279 (357)
                      ++++.-.+.+-  . ........... +.+|+|+-.. .+.  .+.....+.++|+|++++-|....
T Consensus       201 a~eNa~~N~v~~~~~~~~~~~~~~~~~~~~DvIVANILA~vl~~La~~~~~~lkpgg~lIlSGIl~~  267 (300)
T COG2264         201 ARENARLNGVELLVQAKGFLLLEVPENGPFDVIVANILAEVLVELAPDIKRLLKPGGRLILSGILED  267 (300)
T ss_pred             HHHHHHHcCCchhhhcccccchhhcccCcccEEEehhhHHHHHHHHHHHHHHcCCCceEEEEeehHh
Confidence            54422222111  0 11111122233 3799998654 221  134567788999999999887654

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=95.84  E-value=0.064  Score=49.87  Aligned_cols=76  Identities=14%  Similarity=0.121  Sum_probs=54.1

Q ss_pred             CCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc--CC-cEE--EcCCChhHHHHhhCCccEEEEcC
Q 018382          179 QSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL--GA-DQY--LVSSDATRMQEAADSLDYIIDTV  252 (357)
Q Consensus       179 ~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~--g~-~~v--v~~~~~~~~~~~~~~~d~v~d~~  252 (357)
                      ..+.+|||+|+ |.+|..+++.+...|.+|+++.++..+...+...+  +. -.+  .|..+.+.+.++..++|+||.++
T Consensus         8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~A   87 (353)
T PLN02896          8 SATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVKGCDGVFHVA   87 (353)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHcCCCEEEECC
Confidence            45778999986 99999999999888999999888766554443322  11 112  24445555666666899999988


Q ss_pred             CC
Q 018382          253 PA  254 (357)
Q Consensus       253 g~  254 (357)
                      +.
T Consensus        88 ~~   89 (353)
T PLN02896         88 AS   89 (353)
T ss_pred             cc
Confidence            64

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.83  E-value=0.058  Score=47.67  Aligned_cols=75  Identities=15%  Similarity=0.188  Sum_probs=50.8

Q ss_pred             CCCeEEEEec---ChHHHHHHHHHHHcCCeEEEEeCCc--HHHHHHHHhcCCc---EEEcCCChhHHHHh----h---CC
Q 018382          180 SGLRGGILGL---GGVGHMGVLIAKAMGHHVTVISSSD--KKRVEAMEHLGAD---QYLVSSDATRMQEA----A---DS  244 (357)
Q Consensus       180 ~~~~VlI~G~---g~~G~~ai~la~~~g~~V~~~~~~~--~~~~~~~~~~g~~---~vv~~~~~~~~~~~----~---~~  244 (357)
                      .+++++|+|+   +++|.++++.+...|++|+++++++  +..+.+.+.++..   ...|..+++.++++    .   +.
T Consensus         6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~   85 (256)
T PRK07889          6 EGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREHVDG   85 (256)
T ss_pred             cCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            4678999985   7999999998888999999988654  3334444435421   22455555433332    2   37


Q ss_pred             ccEEEEcCCC
Q 018382          245 LDYIIDTVPA  254 (357)
Q Consensus       245 ~d~v~d~~g~  254 (357)
                      +|++++++|.
T Consensus        86 iD~li~nAG~   95 (256)
T PRK07889         86 LDGVVHSIGF   95 (256)
T ss_pred             CcEEEEcccc
Confidence            9999998875

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=95.83  E-value=0.11  Score=41.26  Aligned_cols=98  Identities=15%  Similarity=0.116  Sum_probs=71.0

Q ss_pred             cccccchhhhhhhhhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChh
Q 018382          158 AAPLLCAGVTVFSPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDAT  236 (357)
Q Consensus       158 aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~  236 (357)
                      ...+|+........++..+.--.|++|+|+|- ..+|.-++.++...|++|+...+....                    
T Consensus         5 ~~~~p~t~~a~~~ll~~~~~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~~--------------------   64 (140)
T cd05212           5 PLFVSPVAKAVKELLNKEGVRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTIQ--------------------   64 (140)
T ss_pred             CcccccHHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCcC--------------------
Confidence            34566666666666666655458999999986 899999999999999999988753211                    


Q ss_pred             HHHHhhCCccEEEEcCCCCCChHHHHhccccCCeEEEEccCC
Q 018382          237 RMQEAADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVIN  278 (357)
Q Consensus       237 ~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~  278 (357)
                       +++.....|+|+-++|....+.  .+.++++-.++.+|...
T Consensus        65 -l~~~v~~ADIVvsAtg~~~~i~--~~~ikpGa~Vidvg~~~  103 (140)
T cd05212          65 -LQSKVHDADVVVVGSPKPEKVP--TEWIKPGATVINCSPTK  103 (140)
T ss_pred             -HHHHHhhCCEEEEecCCCCccC--HHHcCCCCEEEEcCCCc
Confidence             2233456899999999874433  46789998888877654

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=95.82  E-value=0.097  Score=51.43  Aligned_cols=96  Identities=17%  Similarity=0.109  Sum_probs=63.3

Q ss_pred             CCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCCC--
Q 018382          180 SGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHP--  257 (357)
Q Consensus       180 ~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~--  257 (357)
                      .+++++|+|+|++|.+++..+...|++|+++.++.++.+.+.+.++.. .+...+  .........|+++++++-...  
T Consensus       378 ~~k~vlIlGaGGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l~~~-~~~~~~--~~~~~~~~~diiINtT~vGm~~~  454 (529)
T PLN02520        378 AGKLFVVIGAGGAGKALAYGAKEKGARVVIANRTYERAKELADAVGGQ-ALTLAD--LENFHPEEGMILANTTSVGMQPN  454 (529)
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCc-eeeHhH--hhhhccccCeEEEecccCCCCCC
Confidence            467899999999999999999999999999999888877777656532 222211  111122357899988754411  


Q ss_pred             ---hHHHHhccccCCeEEEEccCC
Q 018382          258 ---LEPYLSLLKLDGKLILTGVIN  278 (357)
Q Consensus       258 ---~~~~~~~l~~~G~~v~~g~~~  278 (357)
                         .......+++.+.++++-..+
T Consensus       455 ~~~~pl~~~~l~~~~~v~D~vY~P  478 (529)
T PLN02520        455 VDETPISKHALKHYSLVFDAVYTP  478 (529)
T ss_pred             CCCCcccHhhCCCCCEEEEeccCC
Confidence               011234566777777664443

>PRK07791 short chain dehydrogenase; Provisional

Probab=95.82  E-value=0.05  Score=48.98  Aligned_cols=76  Identities=20%  Similarity=0.199  Sum_probs=50.5

Q ss_pred             CCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCc---------HHHHHHHHh---cCCcE---EEcCCChhHHH---
Q 018382          179 QSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSD---------KKRVEAMEH---LGADQ---YLVSSDATRMQ---  239 (357)
Q Consensus       179 ~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~---------~~~~~~~~~---~g~~~---vv~~~~~~~~~---  239 (357)
                      -+++++||+|+ +++|.+.++.+...|++|++++++.         ++.+.+.++   .|...   .+|..+.+.++   
T Consensus         4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~   83 (286)
T PRK07791          4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLV   83 (286)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHH
Confidence            35789999987 9999999998888999999987654         433333222   24221   23555543333   


Q ss_pred             -Hhh---CCccEEEEcCCC
Q 018382          240 -EAA---DSLDYIIDTVPA  254 (357)
Q Consensus       240 -~~~---~~~d~v~d~~g~  254 (357)
                       ++.   +.+|++++++|.
T Consensus        84 ~~~~~~~g~id~lv~nAG~  102 (286)
T PRK07791         84 DAAVETFGGLDVLVNNAGI  102 (286)
T ss_pred             HHHHHhcCCCCEEEECCCC
Confidence             222   478999999875

>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]

Probab=95.81  E-value=0.047  Score=46.93  Aligned_cols=92  Identities=32%  Similarity=0.372  Sum_probs=60.7

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCCcEEEcCCChhH--HHHhhCCccEEEE---
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGADQYLVSSDATR--MQEAADSLDYIID---  250 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~~~vv~~~~~~~--~~~~~~~~d~v~d---  250 (357)
                      -+|.+||=.|+|+ |++..-+|+. |++|+.++-+++-.+.++.+   -|..  +|+.....  +.+..+.||+|+.   
T Consensus        58 l~g~~vLDvGCGg-G~Lse~mAr~-Ga~VtgiD~se~~I~~Ak~ha~e~gv~--i~y~~~~~edl~~~~~~FDvV~cmEV  133 (243)
T COG2227          58 LPGLRVLDVGCGG-GILSEPLARL-GASVTGIDASEKPIEVAKLHALESGVN--IDYRQATVEDLASAGGQFDVVTCMEV  133 (243)
T ss_pred             CCCCeEEEecCCc-cHhhHHHHHC-CCeeEEecCChHHHHHHHHhhhhcccc--ccchhhhHHHHHhcCCCccEEEEhhH
Confidence            3788999999853 5555555554 89999999998877766531   2322  45554322  2222247999874   


Q ss_pred             --cCCCCC-ChHHHHhccccCCeEEEE
Q 018382          251 --TVPANH-PLEPYLSLLKLDGKLILT  274 (357)
Q Consensus       251 --~~g~~~-~~~~~~~~l~~~G~~v~~  274 (357)
                        .+..+. .++.+.++++|+|.+..-
T Consensus       134 lEHv~dp~~~~~~c~~lvkP~G~lf~S  160 (243)
T COG2227         134 LEHVPDPESFLRACAKLVKPGGILFLS  160 (243)
T ss_pred             HHccCCHHHHHHHHHHHcCCCcEEEEe
Confidence              344432 456788999999998755

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=95.81  E-value=0.032  Score=50.91  Aligned_cols=87  Identities=18%  Similarity=0.241  Sum_probs=62.3

Q ss_pred             CCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCCC--
Q 018382          180 SGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHP--  257 (357)
Q Consensus       180 ~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~--  257 (357)
                      .|++|.|+|.|.+|..+++.++.+|++|++..++.++..      +.....   ....++++....|+|+.+......  
T Consensus       135 ~g~tvgIvG~G~IG~~vA~~l~afG~~V~~~~~~~~~~~------~~~~~~---~~~~l~e~l~~aDvvv~~lPlt~~T~  205 (312)
T PRK15469        135 EDFTIGILGAGVLGSKVAQSLQTWGFPLRCWSRSRKSWP------GVQSFA---GREELSAFLSQTRVLINLLPNTPETV  205 (312)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCCCCC------Cceeec---ccccHHHHHhcCCEEEECCCCCHHHH
Confidence            578999999999999999999999999999887543211      222111   122355666788999988876422  


Q ss_pred             --h-HHHHhccccCCeEEEEc
Q 018382          258 --L-EPYLSLLKLDGKLILTG  275 (357)
Q Consensus       258 --~-~~~~~~l~~~G~~v~~g  275 (357)
                        + ...++.|+++..++.++
T Consensus       206 ~li~~~~l~~mk~ga~lIN~a  226 (312)
T PRK15469        206 GIINQQLLEQLPDGAYLLNLA  226 (312)
T ss_pred             HHhHHHHHhcCCCCcEEEECC
Confidence              2 24677899988888774

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=95.78  E-value=0.1  Score=46.61  Aligned_cols=75  Identities=16%  Similarity=0.068  Sum_probs=54.6

Q ss_pred             CCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc--C--CcEEEcCCChhHHHHhhC---------C
Q 018382          179 QSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL--G--ADQYLVSSDATRMQEAAD---------S  244 (357)
Q Consensus       179 ~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~--g--~~~vv~~~~~~~~~~~~~---------~  244 (357)
                      -+++.|||+|+ +++|..++.-+...|.+|++.+-.++..+.++...  +  -+..+|..+++.+++...         +
T Consensus        27 ~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~g  106 (322)
T KOG1610|consen   27 LSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGEDG  106 (322)
T ss_pred             cCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhccccc
Confidence            45677999998 99999999999999999999998887766665533  2  133456666555444321         6


Q ss_pred             ccEEEEcCC
Q 018382          245 LDYIIDTVP  253 (357)
Q Consensus       245 ~d~v~d~~g  253 (357)
                      .=.++|++|
T Consensus       107 LwglVNNAG  115 (322)
T KOG1610|consen  107 LWGLVNNAG  115 (322)
T ss_pred             ceeEEeccc
Confidence            667888887

>PRK06114 short chain dehydrogenase; Provisional

Probab=95.78  E-value=0.063  Score=47.28  Aligned_cols=75  Identities=15%  Similarity=0.181  Sum_probs=50.1

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcH-HHHHHHH---hcCCc---EEEcCCChhHHHHh----h---CC
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDK-KRVEAME---HLGAD---QYLVSSDATRMQEA----A---DS  244 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~-~~~~~~~---~~g~~---~vv~~~~~~~~~~~----~---~~  244 (357)
                      +++++||+|+ +++|.++++.+...|++|+++.++++ ..+.+.+   ..+..   ...|..+++.+++.    .   +.
T Consensus         7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~   86 (254)
T PRK06114          7 DGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELGA   86 (254)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            5789999987 99999999999989999999988653 2222222   13422   12355554433322    1   36


Q ss_pred             ccEEEEcCCC
Q 018382          245 LDYIIDTVPA  254 (357)
Q Consensus       245 ~d~v~d~~g~  254 (357)
                      +|++++++|.
T Consensus        87 id~li~~ag~   96 (254)
T PRK06114         87 LTLAVNAAGI   96 (254)
T ss_pred             CCEEEECCCC
Confidence            8999999885

>PLN03139 formate dehydrogenase; Provisional

Probab=95.77  E-value=0.058  Score=50.54  Aligned_cols=89  Identities=13%  Similarity=0.163  Sum_probs=62.1

Q ss_pred             CCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCCC--
Q 018382          180 SGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHP--  257 (357)
Q Consensus       180 ~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~--  257 (357)
                      .|++|.|+|.|.+|..+++.++.+|++|++.+++....+...+ .|+...      +.++++....|+|+.++.....  
T Consensus       198 ~gktVGIVG~G~IG~~vA~~L~afG~~V~~~d~~~~~~~~~~~-~g~~~~------~~l~ell~~sDvV~l~lPlt~~T~  270 (386)
T PLN03139        198 EGKTVGTVGAGRIGRLLLQRLKPFNCNLLYHDRLKMDPELEKE-TGAKFE------EDLDAMLPKCDVVVINTPLTEKTR  270 (386)
T ss_pred             CCCEEEEEeecHHHHHHHHHHHHCCCEEEEECCCCcchhhHhh-cCceec------CCHHHHHhhCCEEEEeCCCCHHHH
Confidence            5789999999999999999999999999998876433333333 554321      1234555668999877764321  


Q ss_pred             --h-HHHHhccccCCeEEEEc
Q 018382          258 --L-EPYLSLLKLDGKLILTG  275 (357)
Q Consensus       258 --~-~~~~~~l~~~G~~v~~g  275 (357)
                        + ...++.|+++..+|.++
T Consensus       271 ~li~~~~l~~mk~ga~lIN~a  291 (386)
T PLN03139        271 GMFNKERIAKMKKGVLIVNNA  291 (386)
T ss_pred             HHhCHHHHhhCCCCeEEEECC
Confidence              1 34677888888777764

>PRK06823 ornithine cyclodeaminase; Validated

Probab=95.77  E-value=0.092  Score=47.95  Aligned_cols=100  Identities=19%  Similarity=0.180  Sum_probs=67.8

Q ss_pred             hccCCCCCCCeEEEEecChHHHHHHHHHHHc-CC-eEEEEeCCcHHHHHHHHhc---CCcEEEcCCChhHHHHhhCCccE
Q 018382          173 SHFGLKQSGLRGGILGLGGVGHMGVLIAKAM-GH-HVTVISSSDKKRVEAMEHL---GADQYLVSSDATRMQEAADSLDY  247 (357)
Q Consensus       173 ~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~-g~-~V~~~~~~~~~~~~~~~~~---g~~~vv~~~~~~~~~~~~~~~d~  247 (357)
                      +.+.+ +..+++.|+|+|..+...++.+... .. +|.+..++.++.+.+.+.+   +.+... .   +..++...+.|+
T Consensus       121 ~~La~-~d~~~l~iiG~G~qA~~~~~a~~~v~~i~~v~v~~r~~~~a~~~~~~~~~~~~~v~~-~---~~~~~av~~ADI  195 (315)
T PRK06823        121 RLLAP-QHVSAIGIVGTGIQARMQLMYLKNVTDCRQLWVWGRSETALEEYRQYAQALGFAVNT-T---LDAAEVAHAANL  195 (315)
T ss_pred             HHhcC-CCCCEEEEECCcHHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHhcCCcEEE-E---CCHHHHhcCCCE
Confidence            44444 5567888999999998888777654 44 8999999999877555433   332221 1   223455679999


Q ss_pred             EEEcCCCCCChHHHHhccccCCeEEEEccCC
Q 018382          248 IIDTVPANHPLEPYLSLLKLDGKLILTGVIN  278 (357)
Q Consensus       248 v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~  278 (357)
                      |+.++++...+- -.+.++++-.+..+|...
T Consensus       196 V~taT~s~~P~~-~~~~l~~G~hi~~iGs~~  225 (315)
T PRK06823        196 IVTTTPSREPLL-QAEDIQPGTHITAVGADS  225 (315)
T ss_pred             EEEecCCCCcee-CHHHcCCCcEEEecCCCC
Confidence            998887763332 235678888888888654

>TIGR01532 E4PD_g-proteo D-erythrose-4-phosphate dehydrogenase

Probab=95.76  E-value=0.076  Score=48.58  Aligned_cols=94  Identities=16%  Similarity=0.143  Sum_probs=60.8

Q ss_pred             eEEEEecChHHHHHHHHHHHcC----CeEEEEeC--CcHHHHHHHHhcCCc--------------E--------EEcCCC
Q 018382          183 RGGILGLGGVGHMGVLIAKAMG----HHVTVISS--SDKKRVEAMEHLGAD--------------Q--------YLVSSD  234 (357)
Q Consensus       183 ~VlI~G~g~~G~~ai~la~~~g----~~V~~~~~--~~~~~~~~~~~~g~~--------------~--------vv~~~~  234 (357)
                      +|.|.|.|.+|..+++.+...+    .+|+.+..  +.+....+.+ +...              -        +...++
T Consensus         1 ~IaInGfGrIGR~vlr~l~e~~~~~~~~vvaInd~~~~~~~ayll~-yDS~hg~~~~~v~~~~~~l~v~g~~i~v~~~~~   79 (325)
T TIGR01532         1 RVAINGFGRIGRNVLRALYESGERLGIEVVALNELADQASMAHLLR-YDTSHGRFPGEVKVDGDCLHVNGDCIRVLHSPT   79 (325)
T ss_pred             CEEEECCCHHHHHHHHHHHhcCCCCCeEEEEEecCCCHHHHHHHHh-hCccCCCCCCcEEEeCCEEEECCeEEEEEEcCC
Confidence            4789999999999999987653    56666643  2222333333 3210              1        111122


Q ss_pred             hhHHHHhhCCccEEEEcCCCCCChHHHHhccccCCeEEEEccC
Q 018382          235 ATRMQEAADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVI  277 (357)
Q Consensus       235 ~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~  277 (357)
                      ++.+.....++|+||+|+|.....+.+...++.|++.|.++.+
T Consensus        80 p~~~~w~~~gvDiVie~tG~~~s~e~a~~~l~aGa~~V~~SaP  122 (325)
T TIGR01532        80 PEALPWRALGVDLVLDCTGVYGNREQGERHIRAGAKRVLFSHP  122 (325)
T ss_pred             hhhccccccCCCEEEEccchhccHHHHHHHHHcCCeEEEecCC
Confidence            2223333348999999999986677888889988888888765

Accordingly, this model is very close to the corresponding models for GAPDH, and those sequences which hit above trusted here invariably hit between trusted and noise to the GAPDH model (TIGR01534). Similarly, it may be found that there are species outside of the gamma proteobacteria which synthesize pyridoxine and have more than one aparrent GAPDH gene of which one may have E4PD activity - this may necessitate a readjustment of these models. Alternatively, some of the GAPDH enzymes may prove to be bifunctional in certain species.

>PLN03075 nicotianamine synthase; Provisional

Probab=95.76  E-value=0.033  Score=49.94  Aligned_cols=96  Identities=11%  Similarity=0.079  Sum_probs=64.3

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHc--CCeEEEEeCCcHHHHHHHHhcCC----cEEEcCCChhHHHHh--hCCccEEEE
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAM--GHHVTVISSSDKKRVEAMEHLGA----DQYLVSSDATRMQEA--ADSLDYIID  250 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~--g~~V~~~~~~~~~~~~~~~~~g~----~~vv~~~~~~~~~~~--~~~~d~v~d  250 (357)
                      .+.++|+-+|+|+.++.++-+++..  +.+++.++.+++..+.+++.+..    ..-+.....+.....  .+.||+||-
T Consensus       122 ~~p~~VldIGcGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~~Da~~~~~~l~~FDlVF~  201 (296)
T PLN03075        122 GVPTKVAFVGSGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHTADVMDVTESLKEYDVVFL  201 (296)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEECchhhcccccCCcCEEEE
Confidence            3778999999999999888888655  34899999999888777774422    111111111121111  257999986


Q ss_pred             cC------CC-CCChHHHHhccccCCeEEEE
Q 018382          251 TV------PA-NHPLEPYLSLLKLDGKLILT  274 (357)
Q Consensus       251 ~~------g~-~~~~~~~~~~l~~~G~~v~~  274 (357)
                      .+      .. ...++...+.|+++|.++.=
T Consensus       202 ~ALi~~dk~~k~~vL~~l~~~LkPGG~Lvlr  232 (296)
T PLN03075        202 AALVGMDKEEKVKVIEHLGKHMAPGALLMLR  232 (296)
T ss_pred             ecccccccccHHHHHHHHHHhcCCCcEEEEe
Confidence            64      11 12467788899999998754

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=95.76  E-value=0.064  Score=46.61  Aligned_cols=75  Identities=19%  Similarity=0.271  Sum_probs=51.6

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCCcE-E--EcCCChhHHHHh-------hCCc
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGADQ-Y--LVSSDATRMQEA-------ADSL  245 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~~~-v--v~~~~~~~~~~~-------~~~~  245 (357)
                      +++++||+|+ |.+|..+++.+...|.+|+++.+++++.+.....   .+... +  .|..+++.+.+.       ..++
T Consensus         4 ~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   83 (246)
T PRK05653          4 QGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGAL   83 (246)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            4578999987 9999999999888899999999987765433221   33221 2  355554433222       1368


Q ss_pred             cEEEEcCCC
Q 018382          246 DYIIDTVPA  254 (357)
Q Consensus       246 d~v~d~~g~  254 (357)
                      |.++.++|.
T Consensus        84 d~vi~~ag~   92 (246)
T PRK05653         84 DILVNNAGI   92 (246)
T ss_pred             CEEEECCCc
Confidence            999999866

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=95.75  E-value=0.053  Score=47.81  Aligned_cols=74  Identities=11%  Similarity=0.091  Sum_probs=50.3

Q ss_pred             CCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh----cCC--cE--EEcCCChhHHHH----hh---CC
Q 018382          181 GLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH----LGA--DQ--YLVSSDATRMQE----AA---DS  244 (357)
Q Consensus       181 ~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~----~g~--~~--vv~~~~~~~~~~----~~---~~  244 (357)
                      ++++||+|+ |.+|.++++.+...|++|++++++..+.+.+.+.    .+.  .+  ..|..+.+.+.+    +.   ++
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   81 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR   81 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            468999987 9999999999988899999999887655444322    231  11  225455443332    21   37


Q ss_pred             ccEEEEcCCC
Q 018382          245 LDYIIDTVPA  254 (357)
Q Consensus       245 ~d~v~d~~g~  254 (357)
                      +|+++.++|.
T Consensus        82 id~vv~~ag~   91 (259)
T PRK12384         82 VDLLVYNAGI   91 (259)
T ss_pred             CCEEEECCCc
Confidence            8999998874

>PRK08628 short chain dehydrogenase; Provisional

Probab=95.75  E-value=0.062  Score=47.34  Aligned_cols=75  Identities=16%  Similarity=0.118  Sum_probs=51.3

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHH--hcCCc---EEEcCCChhHHHHhh-------CCcc
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAME--HLGAD---QYLVSSDATRMQEAA-------DSLD  246 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~--~~g~~---~vv~~~~~~~~~~~~-------~~~d  246 (357)
                      +++++||+|+ |++|..+++.+...|++|+++++++++.+...+  ..+..   ...|..+++.++...       +++|
T Consensus         6 ~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   85 (258)
T PRK08628          6 KDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRID   85 (258)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCC
Confidence            5679999987 999999998888889999999988766522222  12322   223555544333321       3789


Q ss_pred             EEEEcCCC
Q 018382          247 YIIDTVPA  254 (357)
Q Consensus       247 ~v~d~~g~  254 (357)
                      ++|.++|.
T Consensus        86 ~vi~~ag~   93 (258)
T PRK08628         86 GLVNNAGV   93 (258)
T ss_pred             EEEECCcc
Confidence            99999984

>PRK13243 glyoxylate reductase; Reviewed

Probab=95.74  E-value=0.07  Score=49.20  Aligned_cols=87  Identities=29%  Similarity=0.396  Sum_probs=62.4

Q ss_pred             CCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCC---
Q 018382          180 SGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANH---  256 (357)
Q Consensus       180 ~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~---  256 (357)
                      .|++|.|+|.|.+|..+++.++..|++|++..++.... ...+ +|...       ..+.++....|+|+-++....   
T Consensus       149 ~gktvgIiG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~-~~~~-~~~~~-------~~l~ell~~aDiV~l~lP~t~~T~  219 (333)
T PRK13243        149 YGKTIGIIGFGRIGQAVARRAKGFGMRILYYSRTRKPE-AEKE-LGAEY-------RPLEELLRESDFVSLHVPLTKETY  219 (333)
T ss_pred             CCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCChh-hHHH-cCCEe-------cCHHHHHhhCCEEEEeCCCChHHh
Confidence            57899999999999999999999999999988775432 2222 45321       123445557899988876532   


Q ss_pred             -Ch-HHHHhccccCCeEEEEc
Q 018382          257 -PL-EPYLSLLKLDGKLILTG  275 (357)
Q Consensus       257 -~~-~~~~~~l~~~G~~v~~g  275 (357)
                       .+ ...++.|+++..++.++
T Consensus       220 ~~i~~~~~~~mk~ga~lIN~a  240 (333)
T PRK13243        220 HMINEERLKLMKPTAILVNTA  240 (333)
T ss_pred             hccCHHHHhcCCCCeEEEECc
Confidence             22 35677888888888774

>PRK07775 short chain dehydrogenase; Provisional

Probab=95.74  E-value=0.083  Score=47.15  Aligned_cols=75  Identities=15%  Similarity=0.194  Sum_probs=50.9

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCCcE---EEcCCChhHHHHh-------hCCc
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGADQ---YLVSSDATRMQEA-------ADSL  245 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~~~---vv~~~~~~~~~~~-------~~~~  245 (357)
                      +.+++||+|+ |.+|.++++.+...|++|++++++.++.....+.   .+...   ..|..+.+.+.++       .+++
T Consensus         9 ~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   88 (274)
T PRK07775          9 DRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGEI   88 (274)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            3468999987 9999999998888899999999877655433321   34322   1355554433322       1368


Q ss_pred             cEEEEcCCC
Q 018382          246 DYIIDTVPA  254 (357)
Q Consensus       246 d~v~d~~g~  254 (357)
                      |++|.++|.
T Consensus        89 d~vi~~Ag~   97 (274)
T PRK07775         89 EVLVSGAGD   97 (274)
T ss_pred             CEEEECCCc
Confidence            999999876

>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed

Probab=95.74  E-value=0.039  Score=55.83  Aligned_cols=76  Identities=20%  Similarity=0.191  Sum_probs=53.1

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcH---------------------HHHHHHHhcCCcEEEcCCC--h
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDK---------------------KRVEAMEHLGADQYLVSSD--A  235 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~---------------------~~~~~~~~~g~~~vv~~~~--~  235 (357)
                      ..+++|+|+|+|+.|++++..+...|.+|+++.+.+.                     +.+.+++ +|.+...+..-  .
T Consensus       325 ~~~~~VaIIGaGpAGLsaA~~L~~~G~~V~V~E~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~-~Gv~~~~~~~v~~~  403 (654)
T PRK12769        325 KSDKRVAIIGAGPAGLACADVLARNGVAVTVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIFSA-MGIEFELNCEVGKD  403 (654)
T ss_pred             cCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCceeeecCCCccCCHHHHHHHHHHHHH-CCeEEECCCEeCCc
Confidence            3578999999999999999999999999999886532                     2334444 78654333211  1


Q ss_pred             hHHHHhhCCccEEEEcCCCC
Q 018382          236 TRMQEAADSLDYIIDTVPAN  255 (357)
Q Consensus       236 ~~~~~~~~~~d~v~d~~g~~  255 (357)
                      -.++.+..++|.||.++|..
T Consensus       404 i~~~~~~~~~DavilAtGa~  423 (654)
T PRK12769        404 ISLESLLEDYDAVFVGVGTY  423 (654)
T ss_pred             CCHHHHHhcCCEEEEeCCCC
Confidence            11233445799999988864

>PRK06953 short chain dehydrogenase; Provisional

Probab=95.72  E-value=0.063  Score=46.18  Aligned_cols=72  Identities=21%  Similarity=0.174  Sum_probs=52.6

Q ss_pred             CeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCc-EEEcCCChhHHHHh----hC-CccEEEEcCCC
Q 018382          182 LRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGAD-QYLVSSDATRMQEA----AD-SLDYIIDTVPA  254 (357)
Q Consensus       182 ~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~~----~~-~~d~v~d~~g~  254 (357)
                      ++++|+|+ |++|..+++.+...|++|++++++.++.+.+.. .+.. ...|..+.+.++.+    .. ++|+++.+.|.
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~ag~   80 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQA-LGAEALALDVADPASVAGLAWKLDGEALDAAVYVAGV   80 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHHh-ccceEEEecCCCHHHHHHHHHHhcCCCCCEEEECCCc
Confidence            46899986 999999998887889999999998777766655 5533 33555665444443    22 58999998775

>PRK08226 short chain dehydrogenase; Provisional

Probab=95.71  E-value=0.071  Score=47.13  Aligned_cols=75  Identities=17%  Similarity=0.189  Sum_probs=50.4

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHH--hcCCc---EEEcCCChhHHHHh-------hCCcc
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAME--HLGAD---QYLVSSDATRMQEA-------ADSLD  246 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~--~~g~~---~vv~~~~~~~~~~~-------~~~~d  246 (357)
                      +++++||+|+ |++|.++++.+...|++|+++.++++..+...+  ..+..   ...|..+.+.++++       .+.+|
T Consensus         5 ~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   84 (263)
T PRK08226          5 TGKTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRID   84 (263)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            5688999987 999999999998889999999988653322222  12322   12355554433332       13689


Q ss_pred             EEEEcCCC
Q 018382          247 YIIDTVPA  254 (357)
Q Consensus       247 ~v~d~~g~  254 (357)
                      ++|.++|.
T Consensus        85 ~vi~~ag~   92 (263)
T PRK08226         85 ILVNNAGV   92 (263)
T ss_pred             EEEECCCc
Confidence            99998874

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.71  E-value=0.054  Score=48.02  Aligned_cols=75  Identities=17%  Similarity=0.176  Sum_probs=49.9

Q ss_pred             CCCeEEEEec---ChHHHHHHHHHHHcCCeEEEEeCC---cHHHHHHHHhcCCc--EEEcCCChhHHHHh----h---CC
Q 018382          180 SGLRGGILGL---GGVGHMGVLIAKAMGHHVTVISSS---DKKRVEAMEHLGAD--QYLVSSDATRMQEA----A---DS  244 (357)
Q Consensus       180 ~~~~VlI~G~---g~~G~~ai~la~~~g~~V~~~~~~---~~~~~~~~~~~g~~--~vv~~~~~~~~~~~----~---~~  244 (357)
                      +++++||+|+   +++|.++++.+...|++|+++.+.   +++.+.+.++++..  ...|..+++.++++    .   +.
T Consensus         5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   84 (260)
T PRK06997          5 AGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHWDG   84 (260)
T ss_pred             CCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHhCC
Confidence            5788999983   589999998888899999987543   33444444445532  23455555433322    2   47


Q ss_pred             ccEEEEcCCC
Q 018382          245 LDYIIDTVPA  254 (357)
Q Consensus       245 ~d~v~d~~g~  254 (357)
                      +|++++++|.
T Consensus        85 iD~lvnnAG~   94 (260)
T PRK06997         85 LDGLVHSIGF   94 (260)
T ss_pred             CcEEEEcccc
Confidence            9999998864

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=95.69  E-value=0.057  Score=47.78  Aligned_cols=74  Identities=19%  Similarity=0.191  Sum_probs=48.9

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCC-cHHHHHHH----HhcCCc---EEEcCCChhHHHHh----h---C
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSS-DKKRVEAM----EHLGAD---QYLVSSDATRMQEA----A---D  243 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~-~~~~~~~~----~~~g~~---~vv~~~~~~~~~~~----~---~  243 (357)
                      +++++||+|+ +++|.+++..+...|++|+++.++ +++.+.+.    ...+..   ..+|..+++.++++    .   +
T Consensus         7 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   86 (260)
T PRK08416          7 KGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDFD   86 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence            5789999987 999999999998899999887653 33333322    223422   12355555433322    2   3


Q ss_pred             CccEEEEcCC
Q 018382          244 SLDYIIDTVP  253 (357)
Q Consensus       244 ~~d~v~d~~g  253 (357)
                      .+|++++++|
T Consensus        87 ~id~lv~nAg   96 (260)
T PRK08416         87 RVDFFISNAI   96 (260)
T ss_pred             CccEEEECcc
Confidence            6899999885

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=95.69  E-value=0.077  Score=46.72  Aligned_cols=75  Identities=17%  Similarity=0.073  Sum_probs=50.6

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh-cCCcEE-EcCCC-hhHHHHhh-CCccEEEEcCCC
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH-LGADQY-LVSSD-ATRMQEAA-DSLDYIIDTVPA  254 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~-~g~~~v-v~~~~-~~~~~~~~-~~~d~v~d~~g~  254 (357)
                      .+.+|||+|+ |.+|..+++.+...|.+|+++.++.++....... .+...+ .|..+ .+.+.+.. .++|+||.+.|.
T Consensus        16 ~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~~~~l~~~~~~~~d~vi~~~g~   95 (251)
T PLN00141         16 KTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEGSDKLVEAIGDDSDAVICATGF   95 (251)
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcccCCceEEEEeeCCCCHHHHHHHhhcCCCEEEECCCC
Confidence            4678999997 9999999988888899999999887765433221 122211 34444 23333333 589999988765

>PRK09135 pteridine reductase; Provisional

Probab=95.68  E-value=0.067  Score=46.67  Aligned_cols=75  Identities=16%  Similarity=0.094  Sum_probs=49.3

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcH-HHHHHHHh---c-CC-c--EEEcCCChhHHHHhh-------C
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDK-KRVEAMEH---L-GA-D--QYLVSSDATRMQEAA-------D  243 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~-~~~~~~~~---~-g~-~--~vv~~~~~~~~~~~~-------~  243 (357)
                      .++++||+|+ |.+|..+++.+...|++|++++++.. +.+.+...   . +. .  ...|..+.+.+..+.       +
T Consensus         5 ~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   84 (249)
T PRK09135          5 SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAFG   84 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4578999987 99999999988888999999987633 33322211   1 11 1  223555544333322       3


Q ss_pred             CccEEEEcCCC
Q 018382          244 SLDYIIDTVPA  254 (357)
Q Consensus       244 ~~d~v~d~~g~  254 (357)
                      .+|+||.++|.
T Consensus        85 ~~d~vi~~ag~   95 (249)
T PRK09135         85 RLDALVNNASS   95 (249)
T ss_pred             CCCEEEECCCC
Confidence            68999999874

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=95.67  E-value=0.081  Score=43.01  Aligned_cols=99  Identities=20%  Similarity=0.303  Sum_probs=63.4

Q ss_pred             ccccccchhhhhhhhhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCCh
Q 018382          157 QAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDA  235 (357)
Q Consensus       157 ~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~  235 (357)
                      +...+||.....+..|+..+.--.|++|+|+|. ..+|.-++.++...|+.|+...+...                    
T Consensus        12 ~~~~~PcTp~aii~lL~~~~~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~--------------------   71 (160)
T PF02882_consen   12 QPGFVPCTPLAIIELLEYYGIDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTK--------------------   71 (160)
T ss_dssp             TTSS--HHHHHHHHHHHHTT-STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSS--------------------
T ss_pred             CCCCcCCCHHHHHHHHHhcCCCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCC--------------------
Confidence            345667776667777777665468999999996 68999999999999999998665421                    


Q ss_pred             hHHHHhhCCccEEEEcCCCCCChHHHHhccccCCeEEEEccCC
Q 018382          236 TRMQEAADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVIN  278 (357)
Q Consensus       236 ~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~  278 (357)
                       .+++.....|+|+.++|.+..+.  .+.++++-.++++|...
T Consensus        72 -~l~~~~~~ADIVVsa~G~~~~i~--~~~ik~gavVIDvG~~~  111 (160)
T PF02882_consen   72 -NLQEITRRADIVVSAVGKPNLIK--ADWIKPGAVVIDVGINY  111 (160)
T ss_dssp             -SHHHHHTTSSEEEE-SSSTT-B---GGGS-TTEEEEE--CEE
T ss_pred             -cccceeeeccEEeeeeccccccc--cccccCCcEEEecCCcc
Confidence             12334457899999999874433  45788888888887643

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>PRK08303 short chain dehydrogenase; Provisional

Probab=95.67  E-value=0.055  Score=49.25  Aligned_cols=74  Identities=18%  Similarity=0.173  Sum_probs=49.4

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCc----------HHHHHHH---HhcCCc---EEEcCCChhHHHHh-
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSD----------KKRVEAM---EHLGAD---QYLVSSDATRMQEA-  241 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~----------~~~~~~~---~~~g~~---~vv~~~~~~~~~~~-  241 (357)
                      .++++||+|+ +++|.++++.+...|++|++++++.          ++.+.+.   +..|..   ...|..+.+.++++ 
T Consensus         7 ~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~   86 (305)
T PRK08303          7 RGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRALV   86 (305)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHH
Confidence            4789999987 8999999999998999999998863          2332222   223422   12355554433322 


Q ss_pred             ---h---CCccEEEEcC-C
Q 018382          242 ---A---DSLDYIIDTV-P  253 (357)
Q Consensus       242 ---~---~~~d~v~d~~-g  253 (357)
                         .   +.+|++++++ |
T Consensus        87 ~~~~~~~g~iDilVnnA~g  105 (305)
T PRK08303         87 ERIDREQGRLDILVNDIWG  105 (305)
T ss_pred             HHHHHHcCCccEEEECCcc
Confidence               1   3689999988 5

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=95.67  E-value=0.069  Score=46.83  Aligned_cols=74  Identities=18%  Similarity=0.220  Sum_probs=51.1

Q ss_pred             CCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCCc---EEEcCCChhHHHH-------hhCCcc
Q 018382          181 GLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGAD---QYLVSSDATRMQE-------AADSLD  246 (357)
Q Consensus       181 ~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~~---~vv~~~~~~~~~~-------~~~~~d  246 (357)
                      ++++||+|+ |.+|..++..+...|.+|++++++.++.+.+.+.   .+..   ...|..+.+.++.       ...++|
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   80 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLD   80 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence            357999987 9999999998888899999999987766554432   2321   1235555543322       224689


Q ss_pred             EEEEcCCC
Q 018382          247 YIIDTVPA  254 (357)
Q Consensus       247 ~v~d~~g~  254 (357)
                      ++|.+.+.
T Consensus        81 ~vi~~a~~   88 (255)
T TIGR01963        81 ILVNNAGI   88 (255)
T ss_pred             EEEECCCC
Confidence            99988865

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK05650 short chain dehydrogenase; Provisional

Probab=95.66  E-value=0.063  Score=47.76  Aligned_cols=72  Identities=18%  Similarity=0.230  Sum_probs=49.6

Q ss_pred             eEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCCcE---EEcCCChhHHHHh-------hCCccEE
Q 018382          183 RGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGADQ---YLVSSDATRMQEA-------ADSLDYI  248 (357)
Q Consensus       183 ~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~~~---vv~~~~~~~~~~~-------~~~~d~v  248 (357)
                      ++||+|+ |++|..+++.+...|++|+++++++++.+.+.+.   .+.+.   ..|..+.+.+.++       .+++|++
T Consensus         2 ~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~l   81 (270)
T PRK05650          2 RVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDVI   81 (270)
T ss_pred             EEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            6899987 9999999988888899999999987765544331   23222   2344444333322       1379999


Q ss_pred             EEcCCC
Q 018382          249 IDTVPA  254 (357)
Q Consensus       249 ~d~~g~  254 (357)
                      |.++|.
T Consensus        82 I~~ag~   87 (270)
T PRK05650         82 VNNAGV   87 (270)
T ss_pred             EECCCC
Confidence            999885

>PRK08264 short chain dehydrogenase; Validated

Probab=95.66  E-value=0.066  Score=46.52  Aligned_cols=71  Identities=20%  Similarity=0.223  Sum_probs=51.5

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCc-E--EEcCCChhHHHHhh---CCccEEEEc
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGAD-Q--YLVSSDATRMQEAA---DSLDYIIDT  251 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~-~--vv~~~~~~~~~~~~---~~~d~v~d~  251 (357)
                      .++++||+|+ |.+|..+++.+...|+ +|+++.++.++.+.    .+.. .  ..|..+.+.++++.   ..+|++|.+
T Consensus         5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~   80 (238)
T PRK08264          5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD----LGPRVVPLQLDVTDPASVAAAAEAASDVTILVNN   80 (238)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh----cCCceEEEEecCCCHHHHHHHHHhcCCCCEEEEC
Confidence            5678999987 9999999999999999 99999988665432    3321 1  23555555544443   268999999


Q ss_pred             CCC
Q 018382          252 VPA  254 (357)
Q Consensus       252 ~g~  254 (357)
                      +|.
T Consensus        81 ag~   83 (238)
T PRK08264         81 AGI   83 (238)
T ss_pred             CCc
Confidence            887

>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]

Probab=95.66  E-value=0.061  Score=49.19  Aligned_cols=88  Identities=28%  Similarity=0.310  Sum_probs=63.3

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCC-CC-
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPA-NH-  256 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~-~~-  256 (357)
                      -.|+++-|+|.|.+|.+.++.++..|++|+...++..  .+..+.+++.++    +   +.++....|++.-.++. ++ 
T Consensus       144 l~gktvGIiG~GrIG~avA~r~~~Fgm~v~y~~~~~~--~~~~~~~~~~y~----~---l~ell~~sDii~l~~Plt~~T  214 (324)
T COG1052         144 LRGKTLGIIGLGRIGQAVARRLKGFGMKVLYYDRSPN--PEAEKELGARYV----D---LDELLAESDIISLHCPLTPET  214 (324)
T ss_pred             CCCCEEEEECCCHHHHHHHHHHhcCCCEEEEECCCCC--hHHHhhcCceec----c---HHHHHHhCCEEEEeCCCChHH
Confidence            3589999999999999999999999999999998865  233332555443    1   45566678888654433 32 


Q ss_pred             --Ch-HHHHhccccCCeEEEEc
Q 018382          257 --PL-EPYLSLLKLDGKLILTG  275 (357)
Q Consensus       257 --~~-~~~~~~l~~~G~~v~~g  275 (357)
                        ++ ...++.|++++.+|.++
T Consensus       215 ~hLin~~~l~~mk~ga~lVNta  236 (324)
T COG1052         215 RHLINAEELAKMKPGAILVNTA  236 (324)
T ss_pred             hhhcCHHHHHhCCCCeEEEECC
Confidence              22 35778899999888774

>COG0334 GdhA Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism]

Probab=95.66  E-value=0.14  Score=47.58  Aligned_cols=119  Identities=17%  Similarity=0.233  Sum_probs=74.4

Q ss_pred             CCccccccccchhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcH-----------------
Q 018382          153 MALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDK-----------------  215 (357)
Q Consensus       153 l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~-----------------  215 (357)
                      ...++|....+.+++- .++...+.--.|.+|.|.|.|.+|..+++.+...|++|++++.+..                 
T Consensus       180 ~~r~~aTg~Gv~~~~~-~a~~~~g~~l~G~rVaVQG~GNVg~~aa~~l~~~GAkvva~sds~g~i~~~~Gld~~~l~~~~  258 (411)
T COG0334         180 LGRSEATGYGVFYAIR-EALKALGDDLEGARVAVQGFGNVGQYAAEKLHELGAKVVAVSDSKGGIYDEDGLDVEALLELK  258 (411)
T ss_pred             CCCCcccceehHHHHH-HHHHHcCCCcCCCEEEEECccHHHHHHHHHHHHcCCEEEEEEcCCCceecCCCCCHHHHHHHh
Confidence            3455666666665555 5555555413899999999999999999999988999999988776                 


Q ss_pred             -HHHHHHHhcCCcEEEcCCC----------hhHHHH-hh-----C-CccEEEEcCCCCCChHHHHhccccCCeEEEE
Q 018382          216 -KRVEAMEHLGADQYLVSSD----------ATRMQE-AA-----D-SLDYIIDTVPANHPLEPYLSLLKLDGKLILT  274 (357)
Q Consensus       216 -~~~~~~~~~g~~~vv~~~~----------~~~~~~-~~-----~-~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~  274 (357)
                       +...+.+.+|++.+- ...          |-.+.+ ++     . ..++|.+.+..+ +...+.+.+...|.++.-
T Consensus       259 ~~~~~v~~~~ga~~i~-~~e~~~~~cDIl~PcA~~n~I~~~na~~l~ak~V~EgAN~P-~t~eA~~i~~erGIl~~P  333 (411)
T COG0334         259 ERRGSVAEYAGAEYIT-NEELLEVDCDILIPCALENVITEDNADQLKAKIVVEGANGP-TTPEADEILLERGILVVP  333 (411)
T ss_pred             hhhhhHHhhcCceEcc-ccccccccCcEEcccccccccchhhHHHhhhcEEEeccCCC-CCHHHHHHHHHCCCEEcC
Confidence             444555544543321 110          000000 00     0 355677766666 556666666677766543

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=95.66  E-value=0.052  Score=48.05  Aligned_cols=75  Identities=19%  Similarity=0.218  Sum_probs=48.3

Q ss_pred             CCCeEEEEec---ChHHHHHHHHHHHcCCeEEEEeCCc------HHHHHHHHhcCCc--EEEcCCChhHHHHh----h--
Q 018382          180 SGLRGGILGL---GGVGHMGVLIAKAMGHHVTVISSSD------KKRVEAMEHLGAD--QYLVSSDATRMQEA----A--  242 (357)
Q Consensus       180 ~~~~VlI~G~---g~~G~~ai~la~~~g~~V~~~~~~~------~~~~~~~~~~g~~--~vv~~~~~~~~~~~----~--  242 (357)
                      .+++++|+|+   +++|.++++.+...|++|+++.++.      +..+.+.+..+..  ..+|..+++.++++    .  
T Consensus         5 ~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~   84 (258)
T PRK07370          5 TGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQK   84 (258)
T ss_pred             CCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHHH
Confidence            5788999985   5899999999888999998875432      2233333322211  12455565443322    2  


Q ss_pred             -CCccEEEEcCCC
Q 018382          243 -DSLDYIIDTVPA  254 (357)
Q Consensus       243 -~~~d~v~d~~g~  254 (357)
                       +.+|++++++|.
T Consensus        85 ~g~iD~lv~nag~   97 (258)
T PRK07370         85 WGKLDILVHCLAF   97 (258)
T ss_pred             cCCCCEEEEcccc
Confidence             379999999874

>TIGR00417 speE spermidine synthase

Probab=95.65  E-value=0.1  Score=46.68  Aligned_cols=94  Identities=15%  Similarity=0.135  Sum_probs=57.8

Q ss_pred             CCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCC---------cEEEcCCChhHHHHhhCCccEEE
Q 018382          180 SGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGA---------DQYLVSSDATRMQEAADSLDYII  249 (357)
Q Consensus       180 ~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~---------~~vv~~~~~~~~~~~~~~~d~v~  249 (357)
                      ..++||++|+|. |..+..+++.... +++++..+++-.+.+++.+..         -.++..+..+++++..+.+|+|+
T Consensus        72 ~p~~VL~iG~G~-G~~~~~ll~~~~~~~v~~veid~~vi~~a~~~~~~~~~~~~~~~v~i~~~D~~~~l~~~~~~yDvIi  150 (270)
T TIGR00417        72 NPKHVLVIGGGD-GGVLREVLKHKSVEKATLVDIDEKVIELSKKFLPSLAGSYDDPRVDLQIDDGFKFLADTENTFDVII  150 (270)
T ss_pred             CCCEEEEEcCCc-hHHHHHHHhCCCcceEEEEeCCHHHHHHHHHHhHhhcccccCCceEEEECchHHHHHhCCCCccEEE
Confidence            345999998754 4445566666544 888888887766666664421         11222222234444456899997


Q ss_pred             EcCCC----------CCChHHHHhccccCCeEEEE
Q 018382          250 DTVPA----------NHPLEPYLSLLKLDGKLILT  274 (357)
Q Consensus       250 d~~g~----------~~~~~~~~~~l~~~G~~v~~  274 (357)
                      --...          .+.++.+.+.|+++|.++..
T Consensus       151 ~D~~~~~~~~~~l~~~ef~~~~~~~L~pgG~lv~~  185 (270)
T TIGR00417       151 VDSTDPVGPAETLFTKEFYELLKKALNEDGIFVAQ  185 (270)
T ss_pred             EeCCCCCCcccchhHHHHHHHHHHHhCCCcEEEEc
Confidence            43321          11245788899999999876

the SpeE subunit of spermidine synthase catalysesthe reaction (putrescine + S-adenosylmethioninamine = spermidine + 5'-methylthioadenosine) and is involved in polyamine biosynthesis and in the biosynthesis of spermidine from arganine. The region between residues 77 and 120 of the seed alignment is thought to be involved in binding to decarboxylated SAM.

>PRK06398 aldose dehydrogenase; Validated

Probab=95.65  E-value=0.039  Score=48.81  Aligned_cols=69  Identities=13%  Similarity=0.108  Sum_probs=49.0

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCC-cEEEcCCChhHHHHhh-------CCccEEEE
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGA-DQYLVSSDATRMQEAA-------DSLDYIID  250 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~-~~vv~~~~~~~~~~~~-------~~~d~v~d  250 (357)
                      .++++||+|+ +++|.+++..+...|++|+++.+++.+..      .. ....|..+++.++++.       +.+|++++
T Consensus         5 ~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~~------~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~li~   78 (258)
T PRK06398          5 KDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSYN------DVDYFKVDVSNKEQVIKGIDYVISKYGRIDILVN   78 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccccC------ceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            4689999987 99999999999999999999988754321      11 1224555554433321       36999999


Q ss_pred             cCCC
Q 018382          251 TVPA  254 (357)
Q Consensus       251 ~~g~  254 (357)
                      ++|.
T Consensus        79 ~Ag~   82 (258)
T PRK06398         79 NAGI   82 (258)
T ss_pred             CCCC
Confidence            8874

>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=95.63  E-value=0.067  Score=49.27  Aligned_cols=90  Identities=18%  Similarity=0.207  Sum_probs=64.4

Q ss_pred             CeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCc-----------EEEcCCChhHHHHhhCCccEEEE
Q 018382          182 LRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGAD-----------QYLVSSDATRMQEAADSLDYIID  250 (357)
Q Consensus       182 ~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~-----------~vv~~~~~~~~~~~~~~~d~v~d  250 (357)
                      -+|.|+|+|.+|.+++..+...|.+|++..+++++.+.+.+ .+.+           .+....   ...+.....|+||-
T Consensus         5 m~I~iIG~G~mG~~ia~~L~~~G~~V~~~~r~~~~~~~i~~-~~~~~~~~~g~~~~~~~~~~~---~~~e~~~~aD~Vi~   80 (328)
T PRK14618          5 MRVAVLGAGAWGTALAVLAASKGVPVRLWARRPEFAAALAA-ERENREYLPGVALPAELYPTA---DPEEALAGADFAVV   80 (328)
T ss_pred             CeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH-hCcccccCCCCcCCCCeEEeC---CHHHHHcCCCEEEE
Confidence            46899999999999999998889999999998777766665 3211           011111   12233457899999


Q ss_pred             cCCCCCChHHHHhccccCCeEEEEcc
Q 018382          251 TVPANHPLEPYLSLLKLDGKLILTGV  276 (357)
Q Consensus       251 ~~g~~~~~~~~~~~l~~~G~~v~~g~  276 (357)
                      ++... .++..++.++++-.++.+..
T Consensus        81 ~v~~~-~~~~v~~~l~~~~~vi~~~~  105 (328)
T PRK14618         81 AVPSK-ALRETLAGLPRALGYVSCAK  105 (328)
T ss_pred             ECchH-HHHHHHHhcCcCCEEEEEee
Confidence            99988 67777788887766665543

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.62  E-value=0.062  Score=46.83  Aligned_cols=75  Identities=17%  Similarity=0.302  Sum_probs=50.1

Q ss_pred             CCeEEEEec-ChHHHHHHHHHHHcCCeEEEE-eCCcHHHHHHHHhc---CCc-E--EEcCCChhHHHHhh-------CCc
Q 018382          181 GLRGGILGL-GGVGHMGVLIAKAMGHHVTVI-SSSDKKRVEAMEHL---GAD-Q--YLVSSDATRMQEAA-------DSL  245 (357)
Q Consensus       181 ~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~-~~~~~~~~~~~~~~---g~~-~--vv~~~~~~~~~~~~-------~~~  245 (357)
                      ++++||+|+ |.+|..++..+...|++|+++ .++.++...+.+.+   +.. .  ..|..+.+.+.+..       +++
T Consensus         5 ~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   84 (247)
T PRK05565          5 GKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFGKI   84 (247)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            468999987 999999998888889999998 87766554433322   221 1  23555544333322       279


Q ss_pred             cEEEEcCCCC
Q 018382          246 DYIIDTVPAN  255 (357)
Q Consensus       246 d~v~d~~g~~  255 (357)
                      |++|.++|..
T Consensus        85 d~vi~~ag~~   94 (247)
T PRK05565         85 DILVNNAGIS   94 (247)
T ss_pred             CEEEECCCcC
Confidence            9999988753

>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.61  E-value=0.099  Score=46.63  Aligned_cols=96  Identities=16%  Similarity=0.218  Sum_probs=72.2

Q ss_pred             ccccchhhhhhhhhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhH
Q 018382          159 APLLCAGVTVFSPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATR  237 (357)
Q Consensus       159 a~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~  237 (357)
                      +..||.....+..|+....--.|++|+|+|- ..+|.-++.++...|+.|++..+...                     .
T Consensus       142 ~~~PcTp~av~~ll~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVtv~hs~T~---------------------~  200 (287)
T PRK14176        142 GLVPCTPHGVIRALEEYGVDIEGKNAVIVGHSNVVGKPMAAMLLNRNATVSVCHVFTD---------------------D  200 (287)
T ss_pred             CCCCCcHHHHHHHHHHcCCCCCCCEEEEECCCcccHHHHHHHHHHCCCEEEEEeccCC---------------------C
Confidence            4567776667777776665358999999997 56999999999999999988664211                     1


Q ss_pred             HHHhhCCccEEEEcCCCCCChHHHHhccccCCeEEEEccC
Q 018382          238 MQEAADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVI  277 (357)
Q Consensus       238 ~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~  277 (357)
                      +++....+|+++.++|.+..+  -.+.++++-.++++|..
T Consensus       201 l~~~~~~ADIvv~AvG~p~~i--~~~~vk~gavVIDvGin  238 (287)
T PRK14176        201 LKKYTLDADILVVATGVKHLI--KADMVKEGAVIFDVGIT  238 (287)
T ss_pred             HHHHHhhCCEEEEccCCcccc--CHHHcCCCcEEEEeccc
Confidence            234456789999999998544  45688999999999874

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=95.57  E-value=0.083  Score=46.49  Aligned_cols=74  Identities=15%  Similarity=0.159  Sum_probs=48.9

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHH--HHHHHHhcCCc-E--EEcCCChhHHHH----hh---CCcc
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKK--RVEAMEHLGAD-Q--YLVSSDATRMQE----AA---DSLD  246 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~--~~~~~~~~g~~-~--vv~~~~~~~~~~----~~---~~~d  246 (357)
                      .++++||+|+ |++|.++++.+...|++|+.+.+.+.+  .+.+.+ .+.. +  ..|..+.+.+++    +.   +.+|
T Consensus         9 ~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D   87 (253)
T PRK08993          9 EGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVTA-LGRRFLSLTADLRKIDGIPALLERAVAEFGHID   87 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHHh-cCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence            4689999987 999999999999999999987655432  223333 4422 1  234444433332    21   3699


Q ss_pred             EEEEcCCC
Q 018382          247 YIIDTVPA  254 (357)
Q Consensus       247 ~v~d~~g~  254 (357)
                      ++++++|.
T Consensus        88 ~li~~Ag~   95 (253)
T PRK08993         88 ILVNNAGL   95 (253)
T ss_pred             EEEECCCC
Confidence            99999875

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=95.57  E-value=0.072  Score=46.60  Aligned_cols=75  Identities=16%  Similarity=0.191  Sum_probs=52.1

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCCc-E--EEcCCChhHHHHh----h---CCc
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGAD-Q--YLVSSDATRMQEA----A---DSL  245 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~~-~--vv~~~~~~~~~~~----~---~~~  245 (357)
                      +++++||+|+ |.+|..+++.+...|++|++++++.++...+.+.   .+.. .  ..|..+.+.+++.    .   .++
T Consensus         2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~   81 (250)
T TIGR03206         2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPV   81 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            4678999987 9999999999988999999999887766554332   2321 1  2344454433332    1   368


Q ss_pred             cEEEEcCCC
Q 018382          246 DYIIDTVPA  254 (357)
Q Consensus       246 d~v~d~~g~  254 (357)
                      |++|.++|.
T Consensus        82 d~vi~~ag~   90 (250)
T TIGR03206        82 DVLVNNAGW   90 (250)
T ss_pred             CEEEECCCC
Confidence            999999874

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK07069 short chain dehydrogenase; Validated

Probab=95.55  E-value=0.075  Score=46.51  Aligned_cols=72  Identities=17%  Similarity=0.184  Sum_probs=48.9

Q ss_pred             eEEEEec-ChHHHHHHHHHHHcCCeEEEEeCC-cHHHHHHHHhc----CCc----EEEcCCChhHHHHh-------hCCc
Q 018382          183 RGGILGL-GGVGHMGVLIAKAMGHHVTVISSS-DKKRVEAMEHL----GAD----QYLVSSDATRMQEA-------ADSL  245 (357)
Q Consensus       183 ~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~-~~~~~~~~~~~----g~~----~vv~~~~~~~~~~~-------~~~~  245 (357)
                      ++||+|+ |++|..+++.+...|++|+++.++ .++.+.+.+.+    +..    ...|..+.+.+.++       .+++
T Consensus         1 ~ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   80 (251)
T PRK07069          1 RAFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGL   80 (251)
T ss_pred             CEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence            3789986 999999999998889999999987 55554444323    211    12355554443332       2368


Q ss_pred             cEEEEcCCC
Q 018382          246 DYIIDTVPA  254 (357)
Q Consensus       246 d~v~d~~g~  254 (357)
                      |+++.++|.
T Consensus        81 d~vi~~ag~   89 (251)
T PRK07069         81 SVLVNNAGV   89 (251)
T ss_pred             cEEEECCCc
Confidence            999999875

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=95.54  E-value=0.048  Score=48.76  Aligned_cols=72  Identities=15%  Similarity=0.162  Sum_probs=50.4

Q ss_pred             EEEEec-ChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcC----C---c-E----EEcCCChhHHHHhhC--CccE
Q 018382          184 GGILGL-GGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLG----A---D-Q----YLVSSDATRMQEAAD--SLDY  247 (357)
Q Consensus       184 VlI~G~-g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g----~---~-~----vv~~~~~~~~~~~~~--~~d~  247 (357)
                      |||+|+ |.+|..+++-+...+. ++++++++|.+...+.+++.    .   . .    +-|.++.+.+.++..  ++|+
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~pdi   80 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKPDI   80 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-SE
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcCCCE
Confidence            799986 9999988888877786 89999999999888877772    1   1 1    226667777888776  9999


Q ss_pred             EEEcCCCC
Q 018382          248 IIDTVPAN  255 (357)
Q Consensus       248 v~d~~g~~  255 (357)
                      ||.++.-+
T Consensus        81 VfHaAA~K   88 (293)
T PF02719_consen   81 VFHAAALK   88 (293)
T ss_dssp             EEE-----
T ss_pred             EEEChhcC
Confidence            99988665

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=95.53  E-value=0.097  Score=43.08  Aligned_cols=91  Identities=25%  Similarity=0.274  Sum_probs=61.5

Q ss_pred             eEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEE--cCCChhHHHHhhCCccEEEEcCCCCC---
Q 018382          183 RGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYL--VSSDATRMQEAADSLDYIIDTVPANH---  256 (357)
Q Consensus       183 ~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv--~~~~~~~~~~~~~~~d~v~d~~g~~~---  256 (357)
                      ++.|+|+ |-+|...++=|+..|-+|++++|++++....+.    ..++  |.-+.+.+.....++|+||++.+...   
T Consensus         2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~~~----~~i~q~Difd~~~~a~~l~g~DaVIsA~~~~~~~~   77 (211)
T COG2910           2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAARQG----VTILQKDIFDLTSLASDLAGHDAVISAFGAGASDN   77 (211)
T ss_pred             eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccccc----ceeecccccChhhhHhhhcCCceEEEeccCCCCCh
Confidence            5788887 999999999999999999999999888654311    1111  12233444556679999999887651   


Q ss_pred             ------ChHHHHhccccCC--eEEEEccC
Q 018382          257 ------PLEPYLSLLKLDG--KLILTGVI  277 (357)
Q Consensus       257 ------~~~~~~~~l~~~G--~~v~~g~~  277 (357)
                            ..+.++..|+.-|  ++..+|..
T Consensus        78 ~~~~~k~~~~li~~l~~agv~RllVVGGA  106 (211)
T COG2910          78 DELHSKSIEALIEALKGAGVPRLLVVGGA  106 (211)
T ss_pred             hHHHHHHHHHHHHHHhhcCCeeEEEEcCc
Confidence                  1122555666644  66666654

>PLN02686 cinnamoyl-CoA reductase

Probab=95.53  E-value=0.076  Score=49.71  Aligned_cols=75  Identities=15%  Similarity=0.057  Sum_probs=51.6

Q ss_pred             CCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh--c--------CCcE-EEcCCChhHHHHhhCCcc
Q 018382          179 QSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH--L--------GADQ-YLVSSDATRMQEAADSLD  246 (357)
Q Consensus       179 ~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~--~--------g~~~-vv~~~~~~~~~~~~~~~d  246 (357)
                      ..+++|||+|+ |.+|..+++.+...|++|+++.++.++.+.+.+.  +        +... ..|..+.+.+.+...++|
T Consensus        51 ~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~~~d  130 (367)
T PLN02686         51 AEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLREMEMFGEMGRSNDGIWTVMANLTEPESLHEAFDGCA  130 (367)
T ss_pred             CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhccccccCCceEEEEcCCCCHHHHHHHHHhcc
Confidence            45789999987 9999999999998999999888776554443321  1        1111 135556666666666788


Q ss_pred             EEEEcCC
Q 018382          247 YIIDTVP  253 (357)
Q Consensus       247 ~v~d~~g  253 (357)
                      .||.+.+
T Consensus       131 ~V~hlA~  137 (367)
T PLN02686        131 GVFHTSA  137 (367)
T ss_pred             EEEecCe
Confidence            8886543

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=95.53  E-value=0.077  Score=46.43  Aligned_cols=76  Identities=14%  Similarity=0.157  Sum_probs=50.4

Q ss_pred             CCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCCc--EE--EcCC--ChhHH----HHh---
Q 018382          179 QSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGAD--QY--LVSS--DATRM----QEA---  241 (357)
Q Consensus       179 ~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~~--~v--v~~~--~~~~~----~~~---  241 (357)
                      .+++++||+|+ |.+|..+++.+...|++|++++++.++.+.+.+.   .+..  .+  .|..  +.+.+    ..+   
T Consensus        10 ~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~   89 (247)
T PRK08945         10 LKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEEQ   89 (247)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHHH
Confidence            57889999987 9999999988888899999999987665443322   2321  12  2332  22221    112   


Q ss_pred             hCCccEEEEcCCC
Q 018382          242 ADSLDYIIDTVPA  254 (357)
Q Consensus       242 ~~~~d~v~d~~g~  254 (357)
                      .+.+|+++.+++.
T Consensus        90 ~~~id~vi~~Ag~  102 (247)
T PRK08945         90 FGRLDGVLHNAGL  102 (247)
T ss_pred             hCCCCEEEECCcc
Confidence            2368999998864

>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed

Probab=95.52  E-value=0.093  Score=44.02  Aligned_cols=96  Identities=25%  Similarity=0.279  Sum_probs=58.6

Q ss_pred             CCCCCeEEEEecChHHHHHHHHHHHc-CCeEEEEeCCcHHHHHHHH---hcCCcE--EEcCCChhHHHHhhCCccEEEEc
Q 018382          178 KQSGLRGGILGLGGVGHMGVLIAKAM-GHHVTVISSSDKKRVEAME---HLGADQ--YLVSSDATRMQEAADSLDYIIDT  251 (357)
Q Consensus       178 ~~~~~~VlI~G~g~~G~~ai~la~~~-g~~V~~~~~~~~~~~~~~~---~~g~~~--vv~~~~~~~~~~~~~~~d~v~d~  251 (357)
                      +.++.+||-+|+|. |..++.+++.. +.+|+.++.+++..+.+++   +.+.+.  ++..+-.+ ... .+.+|+|+-.
T Consensus        43 l~~g~~VLDiGcGt-G~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~i~~~~~d~~~-~~~-~~~fDlV~~~  119 (187)
T PRK00107         43 LPGGERVLDVGSGA-GFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKNVTVVHGRAEE-FGQ-EEKFDVVTSR  119 (187)
T ss_pred             cCCCCeEEEEcCCC-CHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCCEEEEeccHhh-CCC-CCCccEEEEc
Confidence            35688999998742 44455555433 5699999999876654443   244432  22211111 111 3479999864


Q ss_pred             CCC--CCChHHHHhccccCCeEEEEcc
Q 018382          252 VPA--NHPLEPYLSLLKLDGKLILTGV  276 (357)
Q Consensus       252 ~g~--~~~~~~~~~~l~~~G~~v~~g~  276 (357)
                      ...  ...++.+.+.|+++|+++.+-.
T Consensus       120 ~~~~~~~~l~~~~~~LkpGG~lv~~~~  146 (187)
T PRK00107        120 AVASLSDLVELCLPLLKPGGRFLALKG  146 (187)
T ss_pred             cccCHHHHHHHHHHhcCCCeEEEEEeC
Confidence            322  1245678889999999987743

>PRK07856 short chain dehydrogenase; Provisional

Probab=95.51  E-value=0.054  Score=47.60  Aligned_cols=70  Identities=19%  Similarity=0.161  Sum_probs=49.3

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcC--Cc-EEEcCCChhHHHHhh-------CCccEE
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLG--AD-QYLVSSDATRMQEAA-------DSLDYI  248 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g--~~-~vv~~~~~~~~~~~~-------~~~d~v  248 (357)
                      .++++||+|+ |++|.++++.+...|++|+++++++++    .. .+  .. ...|..+.+.+++..       +.+|++
T Consensus         5 ~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~----~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   79 (252)
T PRK07856          5 TGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE----TV-DGRPAEFHAADVRDPDQVAALVDAIVERHGRLDVL   79 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh----hh-cCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            5789999987 999999999998899999999987654    11 22  21 224555544333321       368999


Q ss_pred             EEcCCC
Q 018382          249 IDTVPA  254 (357)
Q Consensus       249 ~d~~g~  254 (357)
                      |.++|.
T Consensus        80 i~~ag~   85 (252)
T PRK07856         80 VNNAGG   85 (252)
T ss_pred             EECCCC
Confidence            999874

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=95.51  E-value=0.1  Score=47.50  Aligned_cols=37  Identities=24%  Similarity=0.211  Sum_probs=30.9

Q ss_pred             CCCeEEEEec---ChHHHHHHHHHHHcCCeEEEEeCCcHHH
Q 018382          180 SGLRGGILGL---GGVGHMGVLIAKAMGHHVTVISSSDKKR  217 (357)
Q Consensus       180 ~~~~VlI~G~---g~~G~~ai~la~~~g~~V~~~~~~~~~~  217 (357)
                      .|+++||+|+   .++|.++++.+...|++|++ .+..+++
T Consensus         8 ~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l   47 (303)
T PLN02730          8 RGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPAL   47 (303)
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchh
Confidence            5889999987   89999999999999999988 5554443

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.51  E-value=0.07  Score=46.69  Aligned_cols=75  Identities=24%  Similarity=0.311  Sum_probs=49.3

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEE-eCCcHHHHHHHHh---cCCcE---EEcCCChhHHHHh----h---CC
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVI-SSSDKKRVEAMEH---LGADQ---YLVSSDATRMQEA----A---DS  244 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~-~~~~~~~~~~~~~---~g~~~---vv~~~~~~~~~~~----~---~~  244 (357)
                      +++++||+|+ |.+|..+++.+...|++|++. .++.++.+.+.+.   .+...   ..|..+++.+...    .   ++
T Consensus         3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (250)
T PRK08063          3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFGR   82 (250)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4678999987 999999999999999998764 5665554333221   34321   2355554433322    1   36


Q ss_pred             ccEEEEcCCC
Q 018382          245 LDYIIDTVPA  254 (357)
Q Consensus       245 ~d~v~d~~g~  254 (357)
                      +|++|.++|.
T Consensus        83 id~vi~~ag~   92 (250)
T PRK08063         83 LDVFVNNAAS   92 (250)
T ss_pred             CCEEEECCCC
Confidence            8999998875

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=95.49  E-value=0.083  Score=43.24  Aligned_cols=88  Identities=30%  Similarity=0.328  Sum_probs=58.3

Q ss_pred             eEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCCChHHH-
Q 018382          183 RGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPY-  261 (357)
Q Consensus       183 ~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~-  261 (357)
                      +|-++|.|.+|..+++-+...|.+|++..++.++.+.+.+ .|+... +  +   ..+.....|+||-|+.+....+.. 
T Consensus         3 ~Ig~IGlG~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~-~g~~~~-~--s---~~e~~~~~dvvi~~v~~~~~v~~v~   75 (163)
T PF03446_consen    3 KIGFIGLGNMGSAMARNLAKAGYEVTVYDRSPEKAEALAE-AGAEVA-D--S---PAEAAEQADVVILCVPDDDAVEAVL   75 (163)
T ss_dssp             EEEEE--SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHH-TTEEEE-S--S---HHHHHHHBSEEEE-SSSHHHHHHHH
T ss_pred             EEEEEchHHHHHHHHHHHHhcCCeEEeeccchhhhhhhHH-hhhhhh-h--h---hhhHhhcccceEeecccchhhhhhh
Confidence            6788999999999999999999999999999999888888 564322 1  1   223334569999988875344443 


Q ss_pred             -----HhccccCCeEEEEccC
Q 018382          262 -----LSLLKLDGKLILTGVI  277 (357)
Q Consensus       262 -----~~~l~~~G~~v~~g~~  277 (357)
                           +..++++..++..+..
T Consensus        76 ~~~~i~~~l~~g~iiid~sT~   96 (163)
T PF03446_consen   76 FGENILAGLRPGKIIIDMSTI   96 (163)
T ss_dssp             HCTTHGGGS-TTEEEEE-SS-
T ss_pred             hhhHHhhccccceEEEecCCc
Confidence                 3445566666666443

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=95.49  E-value=0.081  Score=49.71  Aligned_cols=76  Identities=18%  Similarity=0.238  Sum_probs=50.4

Q ss_pred             CCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCC-------------------cHHHHHHHHhc----CCcEEEcCC--
Q 018382          180 SGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSS-------------------DKKRVEAMEHL----GADQYLVSS--  233 (357)
Q Consensus       180 ~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~-------------------~~~~~~~~~~~----g~~~vv~~~--  233 (357)
                      .+.+|+|+|+|++|..++..+...|+ ++++++..                   ..|.+.+.+++    +...+....  
T Consensus       134 ~~~~VlvvG~GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~~~  213 (376)
T PRK08762        134 LEARVLLIGAGGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAVQER  213 (376)
T ss_pred             hcCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEEecc
Confidence            46789999999999999999999999 78887765                   23333333323    222221111  


Q ss_pred             -ChhHHHHhhCCccEEEEcCCCC
Q 018382          234 -DATRMQEAADSLDYIIDTVPAN  255 (357)
Q Consensus       234 -~~~~~~~~~~~~d~v~d~~g~~  255 (357)
                       +.+.+.++..++|+|++|+.+.
T Consensus       214 ~~~~~~~~~~~~~D~Vv~~~d~~  236 (376)
T PRK08762        214 VTSDNVEALLQDVDVVVDGADNF  236 (376)
T ss_pred             CChHHHHHHHhCCCEEEECCCCH
Confidence             1223444556899999999886

>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.47  E-value=0.16  Score=45.24  Aligned_cols=96  Identities=15%  Similarity=0.209  Sum_probs=71.8

Q ss_pred             ccccchhhhhhhhhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhH
Q 018382          159 APLLCAGVTVFSPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATR  237 (357)
Q Consensus       159 a~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~  237 (357)
                      ..+||.....+..|+..+.--.|++|+|+|- ..+|..++.++...|++|++..+...                     .
T Consensus       130 ~~~PcTp~av~~ll~~~~i~l~Gk~V~ViGrs~~vGrpla~lL~~~~atVtv~hs~t~---------------------~  188 (279)
T PRK14178        130 GFAPCTPNGIMTLLHEYKISIAGKRAVVVGRSIDVGRPMAALLLNADATVTICHSKTE---------------------N  188 (279)
T ss_pred             CCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCccccHHHHHHHHhCCCeeEEEecChh---------------------H
Confidence            4567776666767776665458999999997 59999999999999999998775421                     2


Q ss_pred             HHHhhCCccEEEEcCCCCCChHHHHhccccCCeEEEEccC
Q 018382          238 MQEAADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVI  277 (357)
Q Consensus       238 ~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~  277 (357)
                      +++....+|+|+.++|.+..+.  .+.++++..++++|..
T Consensus       189 L~~~~~~ADIvI~Avgk~~lv~--~~~vk~GavVIDVgi~  226 (279)
T PRK14178        189 LKAELRQADILVSAAGKAGFIT--PDMVKPGATVIDVGIN  226 (279)
T ss_pred             HHHHHhhCCEEEECCCcccccC--HHHcCCCcEEEEeecc
Confidence            3344457899999998764443  3447999999999865

>PRK01581 speE spermidine synthase; Validated

Probab=95.47  E-value=0.23  Score=45.92  Aligned_cols=95  Identities=19%  Similarity=0.123  Sum_probs=60.5

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcC-----------C--cEEEcCCChhHHHHhhCC
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLG-----------A--DQYLVSSDATRMQEAADS  244 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g-----------~--~~vv~~~~~~~~~~~~~~  244 (357)
                      ...++|||+|+| .|.++..+++..+. +|+++..+++-.+.+++ +.           .  -.++..+..++++...+.
T Consensus       149 ~~PkrVLIIGgG-dG~tlrelLk~~~v~~It~VEIDpeVIelAr~-~~~L~~~~~~~~~DpRV~vvi~Da~~fL~~~~~~  226 (374)
T PRK01581        149 IDPKRVLILGGG-DGLALREVLKYETVLHVDLVDLDGSMINMARN-VPELVSLNKSAFFDNRVNVHVCDAKEFLSSPSSL  226 (374)
T ss_pred             CCCCEEEEECCC-HHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHh-ccccchhccccCCCCceEEEECcHHHHHHhcCCC
Confidence            344689999865 46667777776654 89999988877776665 21           0  112222223445554558


Q ss_pred             ccEEEEcCCCC-----------CChHHHHhccccCCeEEEEc
Q 018382          245 LDYIIDTVPAN-----------HPLEPYLSLLKLDGKLILTG  275 (357)
Q Consensus       245 ~d~v~d~~g~~-----------~~~~~~~~~l~~~G~~v~~g  275 (357)
                      +|+||--...+           +.++.+.+.|+++|.++...
T Consensus       227 YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPgGV~V~Qs  268 (374)
T PRK01581        227 YDVIIIDFPDPATELLSTLYTSELFARIATFLTEDGAFVCQS  268 (374)
T ss_pred             ccEEEEcCCCccccchhhhhHHHHHHHHHHhcCCCcEEEEec
Confidence            99997443221           13567888999999987764

>PRK08278 short chain dehydrogenase; Provisional

Probab=95.47  E-value=0.076  Score=47.40  Aligned_cols=75  Identities=21%  Similarity=0.227  Sum_probs=50.2

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHH-------HHHHH---HhcCCcE---EEcCCChhHHHHhh---
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKK-------RVEAM---EHLGADQ---YLVSSDATRMQEAA---  242 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~-------~~~~~---~~~g~~~---vv~~~~~~~~~~~~---  242 (357)
                      +++++||+|+ |++|..+++.+...|++|++++++.+.       .+...   +..+.+.   ..|..+.+.+.++.   
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~   84 (273)
T PRK08278          5 SGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAKA   84 (273)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHH
Confidence            4678999987 999999999888889999999986542       11111   1134321   24555554433321   


Q ss_pred             ----CCccEEEEcCCC
Q 018382          243 ----DSLDYIIDTVPA  254 (357)
Q Consensus       243 ----~~~d~v~d~~g~  254 (357)
                          +.+|++|+++|.
T Consensus        85 ~~~~g~id~li~~ag~  100 (273)
T PRK08278         85 VERFGGIDICVNNASA  100 (273)
T ss_pred             HHHhCCCCEEEECCCC
Confidence                379999999875

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=95.44  E-value=0.091  Score=49.63  Aligned_cols=76  Identities=16%  Similarity=0.243  Sum_probs=52.9

Q ss_pred             CCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHH------HHHHhc-CCcE-EEcCCChhHHHHhhC----Cc
Q 018382          179 QSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRV------EAMEHL-GADQ-YLVSSDATRMQEAAD----SL  245 (357)
Q Consensus       179 ~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~------~~~~~~-g~~~-vv~~~~~~~~~~~~~----~~  245 (357)
                      ..+.+|||+|+ |.+|..+++.+...|.+|++++++..+..      ...+.. +... ..|..+++.+.+...    ++
T Consensus        58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~~~  137 (390)
T PLN02657         58 PKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEGDPV  137 (390)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhCCCC
Confidence            45778999987 99999999999888999999998765421      111112 2222 246666665555433    69


Q ss_pred             cEEEEcCCC
Q 018382          246 DYIIDTVPA  254 (357)
Q Consensus       246 d~v~d~~g~  254 (357)
                      |+||+|++.
T Consensus       138 D~Vi~~aa~  146 (390)
T PLN02657        138 DVVVSCLAS  146 (390)
T ss_pred             cEEEECCcc
Confidence            999999874

>PRK05599 hypothetical protein; Provisional

Probab=95.42  E-value=0.083  Score=46.34  Aligned_cols=71  Identities=15%  Similarity=0.125  Sum_probs=48.7

Q ss_pred             eEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc---CCc--E--EEcCCChhHHHH----h---hCCccE
Q 018382          183 RGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL---GAD--Q--YLVSSDATRMQE----A---ADSLDY  247 (357)
Q Consensus       183 ~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~---g~~--~--vv~~~~~~~~~~----~---~~~~d~  247 (357)
                      ++||+|+ +++|.+.++.+. .|.+|+++.+++++.+.+.+++   |.+  +  .+|..+.+.+++    +   .+++|+
T Consensus         2 ~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~   80 (246)
T PRK05599          2 SILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEISL   80 (246)
T ss_pred             eEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCCE
Confidence            6899987 999999888776 4999999999888776554322   322  1  235555443332    2   247999


Q ss_pred             EEEcCCC
Q 018382          248 IIDTVPA  254 (357)
Q Consensus       248 v~d~~g~  254 (357)
                      +++++|.
T Consensus        81 lv~nag~   87 (246)
T PRK05599         81 AVVAFGI   87 (246)
T ss_pred             EEEecCc
Confidence            9998875

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=95.40  E-value=0.088  Score=45.74  Aligned_cols=73  Identities=12%  Similarity=0.080  Sum_probs=47.2

Q ss_pred             CeEEEEec-ChHHHHHHHHHHHcCCeEEEEeC-CcHHHHHHHHhc---CC---cEEEcCCChhHHHH----h---hCCcc
Q 018382          182 LRGGILGL-GGVGHMGVLIAKAMGHHVTVISS-SDKKRVEAMEHL---GA---DQYLVSSDATRMQE----A---ADSLD  246 (357)
Q Consensus       182 ~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~-~~~~~~~~~~~~---g~---~~vv~~~~~~~~~~----~---~~~~d  246 (357)
                      +++||+|+ |++|..+++.+...|++|+++.+ ++++.+...+..   +.   -...|..+++.+.+    +   .+.+|
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPID   80 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCc
Confidence            46899987 99999999999989999998887 444333322212   21   11235555433322    2   23689


Q ss_pred             EEEEcCCC
Q 018382          247 YIIDTVPA  254 (357)
Q Consensus       247 ~v~d~~g~  254 (357)
                      +||.++|.
T Consensus        81 ~vi~~ag~   88 (242)
T TIGR01829        81 VLVNNAGI   88 (242)
T ss_pred             EEEECCCC
Confidence            99999875

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>TIGR02415 23BDH acetoin reductases

Probab=95.40  E-value=0.084  Score=46.33  Aligned_cols=73  Identities=18%  Similarity=0.163  Sum_probs=50.2

Q ss_pred             CeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCCc---EEEcCCChhHHHHh-------hCCccE
Q 018382          182 LRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGAD---QYLVSSDATRMQEA-------ADSLDY  247 (357)
Q Consensus       182 ~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~~---~vv~~~~~~~~~~~-------~~~~d~  247 (357)
                      ++++|+|+ |++|..+++.+...|++|+++.+++++.+.+.+.   .+..   ...|..+++.+.++       .+.+|+
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~   80 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDV   80 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            36899987 9999999999988999999999887655443321   3422   12355555443332       136899


Q ss_pred             EEEcCCC
Q 018382          248 IIDTVPA  254 (357)
Q Consensus       248 v~d~~g~  254 (357)
                      ++.++|.
T Consensus        81 vi~~ag~   87 (254)
T TIGR02415        81 MVNNAGV   87 (254)
T ss_pred             EEECCCc
Confidence            9998875

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]

Probab=95.39  E-value=0.19  Score=43.66  Aligned_cols=99  Identities=23%  Similarity=0.311  Sum_probs=68.3

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCC---cEE-EcCCChhHHHHhhCCccEEEEcCC
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGA---DQY-LVSSDATRMQEAADSLDYIIDTVP  253 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~---~~v-v~~~~~~~~~~~~~~~d~v~d~~g  253 (357)
                      .+|++||=+|+| +|-.++.+++..|- +|++++.+++-++.++++...   ..+ +...+.+.+.--.+.||+|.-+.|
T Consensus        50 ~~g~~vLDva~G-TGd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~i~fv~~dAe~LPf~D~sFD~vt~~fg  128 (238)
T COG2226          50 KPGDKVLDVACG-TGDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQNVEFVVGDAENLPFPDNSFDAVTISFG  128 (238)
T ss_pred             CCCCEEEEecCC-ccHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccceEEEEechhhCCCCCCccCEEEeeeh
Confidence            589999998764 48888899988875 999999999988887775542   111 112222222212247888875544


Q ss_pred             C------CCChHHHHhccccCCeEEEEccCC
Q 018382          254 A------NHPLEPYLSLLKLDGKLILTGVIN  278 (357)
Q Consensus       254 ~------~~~~~~~~~~l~~~G~~v~~g~~~  278 (357)
                      -      ...+++..|.|+|+|+++.+....
T Consensus       129 lrnv~d~~~aL~E~~RVlKpgG~~~vle~~~  159 (238)
T COG2226         129 LRNVTDIDKALKEMYRVLKPGGRLLVLEFSK  159 (238)
T ss_pred             hhcCCCHHHHHHHHHHhhcCCeEEEEEEcCC
Confidence            3      125778999999999998887654

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=95.38  E-value=0.074  Score=49.08  Aligned_cols=75  Identities=17%  Similarity=0.247  Sum_probs=49.4

Q ss_pred             CCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCc---------------------HHH----HHHHHhcCCc-EE--E
Q 018382          180 SGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSD---------------------KKR----VEAMEHLGAD-QY--L  230 (357)
Q Consensus       180 ~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~---------------------~~~----~~~~~~~g~~-~v--v  230 (357)
                      .+.+|+|+|+|++|..++..+...|. ++++++...                     .|.    +.+++ +..+ .+  +
T Consensus        23 ~~~~VlIiG~GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~-inp~v~i~~~  101 (338)
T PRK12475         23 REKHVLIVGAGALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRK-INSEVEIVPV  101 (338)
T ss_pred             cCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHH-HCCCcEEEEE
Confidence            45789999999999999999999998 777777642                     122    22223 3221 11  1


Q ss_pred             cCC-ChhHHHHhhCCccEEEEcCCCC
Q 018382          231 VSS-DATRMQEAADSLDYIIDTVPAN  255 (357)
Q Consensus       231 ~~~-~~~~~~~~~~~~d~v~d~~g~~  255 (357)
                      ... +.+.++++..++|+|+|++.+.
T Consensus       102 ~~~~~~~~~~~~~~~~DlVid~~D~~  127 (338)
T PRK12475        102 VTDVTVEELEELVKEVDLIIDATDNF  127 (338)
T ss_pred             eccCCHHHHHHHhcCCCEEEEcCCCH
Confidence            111 2234555667899999999876

>PRK12743 oxidoreductase; Provisional

Probab=95.38  E-value=0.13  Score=45.33  Aligned_cols=74  Identities=19%  Similarity=0.240  Sum_probs=48.5

Q ss_pred             CCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCc-HHHHHHHH---hcCCc-E--EEcCCChhHHHH----hh---CCc
Q 018382          181 GLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSD-KKRVEAME---HLGAD-Q--YLVSSDATRMQE----AA---DSL  245 (357)
Q Consensus       181 ~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~-~~~~~~~~---~~g~~-~--vv~~~~~~~~~~----~~---~~~  245 (357)
                      ++++||+|+ |++|..+++.+...|++|+++.+++ ++.+.+.+   ..|.. +  ..|..+.+.+++    +.   +++
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRI   81 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            468999987 9999999999999999998876543 33322222   24532 2  245555443322    22   368


Q ss_pred             cEEEEcCCC
Q 018382          246 DYIIDTVPA  254 (357)
Q Consensus       246 d~v~d~~g~  254 (357)
                      |++|.++|.
T Consensus        82 d~li~~ag~   90 (256)
T PRK12743         82 DVLVNNAGA   90 (256)
T ss_pred             CEEEECCCC
Confidence            999998875

>PRK09134 short chain dehydrogenase; Provisional

Probab=95.37  E-value=0.13  Score=45.34  Aligned_cols=75  Identities=13%  Similarity=0.136  Sum_probs=48.9

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCC-cHHHHHHHHh---cCCc---EEEcCCChhHHHHh-------hCC
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSS-DKKRVEAMEH---LGAD---QYLVSSDATRMQEA-------ADS  244 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~-~~~~~~~~~~---~g~~---~vv~~~~~~~~~~~-------~~~  244 (357)
                      .++++||+|+ |++|..+++.+...|++|+++.+. .++.+.+.++   .+..   ...|..+.+.+.+.       .++
T Consensus         8 ~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~   87 (258)
T PRK09134          8 APRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALGP   87 (258)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4678999987 999999999888889999887654 3333333221   2332   12355554433322       236


Q ss_pred             ccEEEEcCCC
Q 018382          245 LDYIIDTVPA  254 (357)
Q Consensus       245 ~d~v~d~~g~  254 (357)
                      +|++|.++|.
T Consensus        88 iD~vi~~ag~   97 (258)
T PRK09134         88 ITLLVNNASL   97 (258)
T ss_pred             CCEEEECCcC
Confidence            8999999874

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.36  E-value=0.12  Score=49.91  Aligned_cols=71  Identities=18%  Similarity=0.251  Sum_probs=49.6

Q ss_pred             CCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcH-HH----HHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCC
Q 018382          180 SGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDK-KR----VEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPA  254 (357)
Q Consensus       180 ~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~-~~----~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~  254 (357)
                      .+++|+|+|+|.+|+.++..+...|++|+++++.+. ..    +++.+ .|... +..+..+   +..+++|+|+.++|.
T Consensus         4 ~~k~v~iiG~g~~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~-~~~~~-~~~~~~~---~~~~~~d~vv~~~g~   78 (450)
T PRK14106          4 KGKKVLVVGAGVSGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGE-LGIEL-VLGEYPE---EFLEGVDLVVVSPGV   78 (450)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHh-cCCEE-EeCCcch---hHhhcCCEEEECCCC
Confidence            468899999988999999999999999999998752 22    22222 46442 2222122   334579999998886


Q ss_pred             C
Q 018382          255 N  255 (357)
Q Consensus       255 ~  255 (357)
                      .
T Consensus        79 ~   79 (450)
T PRK14106         79 P   79 (450)
T ss_pred             C
Confidence            4

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.35  E-value=0.35  Score=42.24  Aligned_cols=97  Identities=11%  Similarity=0.078  Sum_probs=59.8

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCc-HHHH----HHHHhcCCc-E--EEcCCChhHHHH----h---hC
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSD-KKRV----EAMEHLGAD-Q--YLVSSDATRMQE----A---AD  243 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~-~~~~----~~~~~~g~~-~--vv~~~~~~~~~~----~---~~  243 (357)
                      .++++||+|+ |.+|...++-+...|++|+++.++. ++..    .+.+ .+.. .  ..|..+.+.+..    +   ..
T Consensus         5 ~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   83 (252)
T PRK06077          5 KDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKE-NGGEGIGVLADVSTREGCETLAKATIDRYG   83 (252)
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHH-cCCeeEEEEeccCCHHHHHHHHHHHHHHcC
Confidence            3578999987 9999999988888999988776543 2222    1222 3322 1  235555433222    2   23


Q ss_pred             CccEEEEcCCCCC-------------------------ChHHHHhccccCCeEEEEccC
Q 018382          244 SLDYIIDTVPANH-------------------------PLEPYLSLLKLDGKLILTGVI  277 (357)
Q Consensus       244 ~~d~v~d~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~~  277 (357)
                      ++|++|.++|...                         ..+.+.+.++..|+++.++..
T Consensus        84 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~  142 (252)
T PRK06077         84 VADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASV  142 (252)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcch
Confidence            7899999998410                         022334455677889888764

>PRK08219 short chain dehydrogenase; Provisional

Probab=95.34  E-value=0.11  Score=44.59  Aligned_cols=73  Identities=15%  Similarity=0.144  Sum_probs=51.2

Q ss_pred             CeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcE--EEcCCChhHHHHhhC---CccEEEEcCCCC
Q 018382          182 LRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQ--YLVSSDATRMQEAAD---SLDYIIDTVPAN  255 (357)
Q Consensus       182 ~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~--vv~~~~~~~~~~~~~---~~d~v~d~~g~~  255 (357)
                      +++||+|+ |.+|..++..+... .+|+++.++.++.+.+.+.....+  ..|..+.+.+++...   ++|++|.++|..
T Consensus         4 ~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~~   82 (227)
T PRK08219          4 PTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVEQLGRLDVLVHNAGVA   82 (227)
T ss_pred             CEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHHhcCCCCEEEECCCcC
Confidence            57999987 99999988877666 999999998777665554332222  235555555554443   699999998753

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.34  E-value=0.13  Score=50.08  Aligned_cols=71  Identities=25%  Similarity=0.293  Sum_probs=49.3

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHH-----HHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCC
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKK-----RVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVP  253 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~-----~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g  253 (357)
                      ..+++|+|+|+|.+|+.++..++..|.+|++++..+..     .+.+++ .|......... .    ....+|.|+-+.|
T Consensus        14 ~~~~~v~viG~G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~-~gv~~~~~~~~-~----~~~~~D~Vv~s~G   87 (480)
T PRK01438         14 WQGLRVVVAGLGVSGFAAADALLELGARVTVVDDGDDERHRALAAILEA-LGATVRLGPGP-T----LPEDTDLVVTSPG   87 (480)
T ss_pred             cCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHH-cCCEEEECCCc-c----ccCCCCEEEECCC
Confidence            35678999999999999999999999999998865431     123333 67654433221 1    2346888888777


Q ss_pred             CC
Q 018382          254 AN  255 (357)
Q Consensus       254 ~~  255 (357)
                      -.
T Consensus        88 i~   89 (480)
T PRK01438         88 WR   89 (480)
T ss_pred             cC
Confidence            64

>PLN02650 dihydroflavonol-4-reductase

Probab=95.34  E-value=0.097  Score=48.58  Aligned_cols=75  Identities=12%  Similarity=0.005  Sum_probs=51.9

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCC---cE--EEcCCChhHHHHhhCCccEEEE
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGA---DQ--YLVSSDATRMQEAADSLDYIID  250 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~---~~--vv~~~~~~~~~~~~~~~d~v~d  250 (357)
                      ..++|||+|+ |.+|..++..+...|.+|++++++.++.......   .+.   -.  ..|..+.+.+.++..++|+||.
T Consensus         4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~d~ViH   83 (351)
T PLN02650          4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIRGCTGVFH   83 (351)
T ss_pred             CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHhCCCEEEE
Confidence            4578999987 9999999999988899999988876544332221   121   11  1244455556666668999999


Q ss_pred             cCCC
Q 018382          251 TVPA  254 (357)
Q Consensus       251 ~~g~  254 (357)
                      +++.
T Consensus        84 ~A~~   87 (351)
T PLN02650         84 VATP   87 (351)
T ss_pred             eCCC
Confidence            8753

>PRK10637 cysG siroheme synthase; Provisional

Probab=95.33  E-value=0.076  Score=51.24  Aligned_cols=116  Identities=10%  Similarity=-0.014  Sum_probs=71.7

Q ss_pred             CCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcH-HHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCCCh
Q 018382          180 SGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDK-KRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPL  258 (357)
Q Consensus       180 ~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~-~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~~  258 (357)
                      .+++|||+|+|.++.-=++.+...|++|++++..-. +...+.+ .|.-..+. +  ++......++++||-++++...-
T Consensus        11 ~~~~vlvvGgG~vA~rk~~~ll~~ga~v~visp~~~~~~~~l~~-~~~i~~~~-~--~~~~~dl~~~~lv~~at~d~~~n   86 (457)
T PRK10637         11 RDRDCLLVGGGDVAERKARLLLDAGARLTVNALAFIPQFTAWAD-AGMLTLVE-G--PFDESLLDTCWLAIAATDDDAVN   86 (457)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHHh-CCCEEEEe-C--CCChHHhCCCEEEEECCCCHHHh
Confidence            679999999999998877788788999999875422 2333333 33222221 1  12223335899999999987445


Q ss_pred             HHHHhccccCCeEEEEccCCCCcccchHHHh-hccceEEEEe
Q 018382          259 EPYLSLLKLDGKLILTGVINTPMQFLTPMVM-LGRKAITGSF  299 (357)
Q Consensus       259 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~i~g~~  299 (357)
                      +...+..+..|.++.........+|-....+ .+.+++.-+.
T Consensus        87 ~~i~~~a~~~~~lvN~~d~~~~~~f~~pa~~~~g~l~iaisT  128 (457)
T PRK10637         87 QRVSEAAEARRIFCNVVDAPKAASFIMPSIIDRSPLMVAVSS  128 (457)
T ss_pred             HHHHHHHHHcCcEEEECCCcccCeEEEeeEEecCCEEEEEEC
Confidence            5566667778888887665443444333322 2334444443

>PRK07102 short chain dehydrogenase; Provisional

Probab=95.32  E-value=0.09  Score=45.87  Aligned_cols=73  Identities=12%  Similarity=0.063  Sum_probs=49.9

Q ss_pred             CeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc----CCc-E--EEcCCChhHHHHh----hCCccEEE
Q 018382          182 LRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL----GAD-Q--YLVSSDATRMQEA----ADSLDYII  249 (357)
Q Consensus       182 ~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~----g~~-~--vv~~~~~~~~~~~----~~~~d~v~  249 (357)
                      ++++|+|+ |++|..+++.+...|++|+++++++++.+...+.+    +.. +  ..|..+.+.+++.    ...+|+++
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d~vv   81 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPALPDIVL   81 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhhcCCEEE
Confidence            47899987 99999999999888999999999887655443322    211 1  2344554443332    33679999


Q ss_pred             EcCCC
Q 018382          250 DTVPA  254 (357)
Q Consensus       250 d~~g~  254 (357)
                      .++|.
T Consensus        82 ~~ag~   86 (243)
T PRK07102         82 IAVGT   86 (243)
T ss_pred             ECCcC
Confidence            88764

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=95.30  E-value=0.14  Score=47.19  Aligned_cols=85  Identities=21%  Similarity=0.279  Sum_probs=59.9

Q ss_pred             CCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCC---
Q 018382          180 SGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANH---  256 (357)
Q Consensus       180 ~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~---  256 (357)
                      .|.+|.|+|.|.+|..+++.++..|.+|++.+++.+......+         .  ...+.++....|+|+.++....   
T Consensus       145 ~g~~VgIIG~G~IG~~vA~~L~~~G~~V~~~d~~~~~~~~~~~---------~--~~~l~ell~~aDiVil~lP~t~~t~  213 (330)
T PRK12480        145 KNMTVAIIGTGRIGAATAKIYAGFGATITAYDAYPNKDLDFLT---------Y--KDSVKEAIKDADIISLHVPANKESY  213 (330)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCChhHhhhhhh---------c--cCCHHHHHhcCCEEEEeCCCcHHHH
Confidence            5778999999999999999999999999999987544221100         0  1123455567899988887642   


Q ss_pred             --ChHHHHhccccCCeEEEEc
Q 018382          257 --PLEPYLSLLKLDGKLILTG  275 (357)
Q Consensus       257 --~~~~~~~~l~~~G~~v~~g  275 (357)
                        .....+..|+++..++.++
T Consensus       214 ~li~~~~l~~mk~gavlIN~a  234 (330)
T PRK12480        214 HLFDKAMFDHVKKGAILVNAA  234 (330)
T ss_pred             HHHhHHHHhcCCCCcEEEEcC
Confidence              1234567788887777764

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=95.30  E-value=0.15  Score=53.64  Aligned_cols=95  Identities=22%  Similarity=0.193  Sum_probs=67.2

Q ss_pred             CCCeEEEEecChHHHHHHHHHHHc-CCe-------------EEEEeCCcHHHHHHHHhc-CCc-EEEcCCChhHHHHhhC
Q 018382          180 SGLRGGILGLGGVGHMGVLIAKAM-GHH-------------VTVISSSDKKRVEAMEHL-GAD-QYLVSSDATRMQEAAD  243 (357)
Q Consensus       180 ~~~~VlI~G~g~~G~~ai~la~~~-g~~-------------V~~~~~~~~~~~~~~~~~-g~~-~vv~~~~~~~~~~~~~  243 (357)
                      ..++|+|+|+|.+|...++.+... +++             |++.+.+.++.+.+.+.+ +.+ ..+|..+.+.+.+...
T Consensus       568 ~~~rIlVLGAG~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~~~~~v~lDv~D~e~L~~~v~  647 (1042)
T PLN02819        568 KSQNVLILGAGRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIENAEAVQLDVSDSESLLKYVS  647 (1042)
T ss_pred             cCCcEEEECCCHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhcCCCceEEeecCCHHHHHHhhc
Confidence            356899999999999988888654 334             777777777777666656 432 3456667666666556


Q ss_pred             CccEEEEcCCCCCChHHHHhccccCCeEEEE
Q 018382          244 SLDYIIDTVPANHPLEPYLSLLKLDGKLILT  274 (357)
Q Consensus       244 ~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~  274 (357)
                      ++|+|+.+++..-....+..+++.+=.++..
T Consensus       648 ~~DaVIsalP~~~H~~VAkaAieaGkHvv~e  678 (1042)
T PLN02819        648 QVDVVISLLPASCHAVVAKACIELKKHLVTA  678 (1042)
T ss_pred             CCCEEEECCCchhhHHHHHHHHHcCCCEEEC
Confidence            7999999998864555666667766666544

>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate

Probab=95.30  E-value=0.084  Score=42.93  Aligned_cols=91  Identities=24%  Similarity=0.333  Sum_probs=60.1

Q ss_pred             eEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcC-----CcEEEcCC--ChhHHHHhhCCccEEEEcCCCC
Q 018382          183 RGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLG-----ADQYLVSS--DATRMQEAADSLDYIIDTVPAN  255 (357)
Q Consensus       183 ~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g-----~~~vv~~~--~~~~~~~~~~~~d~v~d~~g~~  255 (357)
                      +|.|+|+|..|.+++..+...|.+|+.-.++++..+.+.+.-.     .+..+..+  -.+.+++...+.|+++-++...
T Consensus         1 KI~ViGaG~~G~AlA~~la~~g~~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i~~t~dl~~a~~~ad~IiiavPs~   80 (157)
T PF01210_consen    1 KIAVIGAGNWGTALAALLADNGHEVTLWGRDEEQIEEINETRQNPKYLPGIKLPENIKATTDLEEALEDADIIIIAVPSQ   80 (157)
T ss_dssp             EEEEESSSHHHHHHHHHHHHCTEEEEEETSCHHHHHHHHHHTSETTTSTTSBEETTEEEESSHHHHHTT-SEEEE-S-GG
T ss_pred             CEEEECcCHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhCCCCCCCCCcccCcccccccCHHHHhCcccEEEecccHH
Confidence            5889999999999999999999999999999887777766221     00001000  0123445556899999999887


Q ss_pred             CChHHHHhcccc---CCeEEEE
Q 018382          256 HPLEPYLSLLKL---DGKLILT  274 (357)
Q Consensus       256 ~~~~~~~~~l~~---~G~~v~~  274 (357)
                       ..+..++.+++   .+..+..
T Consensus        81 -~~~~~~~~l~~~l~~~~~ii~  101 (157)
T PF01210_consen   81 -AHREVLEQLAPYLKKGQIIIS  101 (157)
T ss_dssp             -GHHHHHHHHTTTSHTT-EEEE
T ss_pred             -HHHHHHHHHhhccCCCCEEEE
Confidence             67777777666   3554443

This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=95.30  E-value=0.13  Score=49.87  Aligned_cols=73  Identities=14%  Similarity=0.217  Sum_probs=53.3

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCC
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANH  256 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~  256 (357)
                      -.+++++|+|+|++|.+++..+...|++|++..+++++.+.+.+.++.. .++..+   +.. ...+|+|++|+....
T Consensus       330 ~~~k~vlIiGaGgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~~~~~-~~~~~~---~~~-l~~~DiVInatP~g~  402 (477)
T PRK09310        330 LNNQHVAIVGAGGAAKAIATTLARAGAELLIFNRTKAHAEALASRCQGK-AFPLES---LPE-LHRIDIIINCLPPSV  402 (477)
T ss_pred             cCCCEEEEEcCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccc-eechhH---hcc-cCCCCEEEEcCCCCC
Confidence            3567899999999999999999999999999998888777666645432 222111   111 247999999987763

>PLN02214 cinnamoyl-CoA reductase

Probab=95.30  E-value=0.12  Score=47.87  Aligned_cols=74  Identities=19%  Similarity=0.099  Sum_probs=52.3

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHH--HHHHhcC---C-cEE--EcCCChhHHHHhhCCccEEEE
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRV--EAMEHLG---A-DQY--LVSSDATRMQEAADSLDYIID  250 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~--~~~~~~g---~-~~v--v~~~~~~~~~~~~~~~d~v~d  250 (357)
                      ++++|||+|+ |.+|..+++.+...|.+|++++++.++..  .+.+ +.   . -.+  .|..+.+.+.+...++|+||.
T Consensus         9 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih   87 (342)
T PLN02214          9 AGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRE-LEGGKERLILCKADLQDYEALKAAIDGCDGVFH   87 (342)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHH-hhCCCCcEEEEecCcCChHHHHHHHhcCCEEEE
Confidence            5678999987 99999999999888999999998765421  1122 21   1 112  245555556666678999999


Q ss_pred             cCCC
Q 018382          251 TVPA  254 (357)
Q Consensus       251 ~~g~  254 (357)
                      +++.
T Consensus        88 ~A~~   91 (342)
T PLN02214         88 TASP   91 (342)
T ss_pred             ecCC
Confidence            9875

>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1

Probab=95.29  E-value=0.042  Score=44.22  Aligned_cols=90  Identities=23%  Similarity=0.211  Sum_probs=57.1

Q ss_pred             EEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcC-------CC-hhHHHHhhCCccEEEEcCCCC
Q 018382          184 GGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVS-------SD-ATRMQEAADSLDYIIDTVPAN  255 (357)
Q Consensus       184 VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~-------~~-~~~~~~~~~~~d~v~d~~g~~  255 (357)
                      |+|+|+|++|...+..++..|.+|..+.+.+ +.+..++ .|.....+.       .. ..........+|+||-|+=..
T Consensus         1 I~I~G~GaiG~~~a~~L~~~g~~V~l~~r~~-~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~viv~vKa~   78 (151)
T PF02558_consen    1 ILIIGAGAIGSLYAARLAQAGHDVTLVSRSP-RLEAIKE-QGLTITGPDGDETVQPPIVISAPSADAGPYDLVIVAVKAY   78 (151)
T ss_dssp             EEEESTSHHHHHHHHHHHHTTCEEEEEESHH-HHHHHHH-HCEEEEETTEEEEEEEEEEESSHGHHHSTESEEEE-SSGG
T ss_pred             CEEECcCHHHHHHHHHHHHCCCceEEEEccc-cHHhhhh-eeEEEEecccceecccccccCcchhccCCCcEEEEEeccc
Confidence            6889999999998888888999999999987 6666555 563221111       00 000122345899999988665


Q ss_pred             CChHHHHh----ccccCCeEEEEcc
Q 018382          256 HPLEPYLS----LLKLDGKLILTGV  276 (357)
Q Consensus       256 ~~~~~~~~----~l~~~G~~v~~g~  276 (357)
                       ....+++    .+.+...++.+-+
T Consensus        79 -~~~~~l~~l~~~~~~~t~iv~~qN  102 (151)
T PF02558_consen   79 -QLEQALQSLKPYLDPNTTIVSLQN  102 (151)
T ss_dssp             -GHHHHHHHHCTGEETTEEEEEESS
T ss_pred             -chHHHHHHHhhccCCCcEEEEEeC
Confidence             3444444    4445556666644

1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....

>PRK04148 hypothetical protein; Provisional

Probab=95.29  E-value=0.11  Score=40.84  Aligned_cols=87  Identities=21%  Similarity=0.147  Sum_probs=58.4

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEc-CCChhHHHHhhCCccEEEEcCCCCCC
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLV-SSDATRMQEAADSLDYIIDTVPANHP  257 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~-~~~~~~~~~~~~~~d~v~d~~g~~~~  257 (357)
                      .++.+++++|.| .|...+..+...|.+|++++.+++..+.+++ .+.+.+.+ .-+++  ..+..++|+++..-...+.
T Consensus        15 ~~~~kileIG~G-fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~-~~~~~v~dDlf~p~--~~~y~~a~liysirpp~el   90 (134)
T PRK04148         15 GKNKKIVELGIG-FYFKVAKKLKESGFDVIVIDINEKAVEKAKK-LGLNAFVDDLFNPN--LEIYKNAKLIYSIRPPRDL   90 (134)
T ss_pred             ccCCEEEEEEec-CCHHHHHHHHHCCCEEEEEECCHHHHHHHHH-hCCeEEECcCCCCC--HHHHhcCCEEEEeCCCHHH
Confidence            456789999998 8876666666789999999999998888877 66544332 11111  1334578888877776645


Q ss_pred             hHHHHhccccCC
Q 018382          258 LEPYLSLLKLDG  269 (357)
Q Consensus       258 ~~~~~~~l~~~G  269 (357)
                      ....++.-+.-|
T Consensus        91 ~~~~~~la~~~~  102 (134)
T PRK04148         91 QPFILELAKKIN  102 (134)
T ss_pred             HHHHHHHHHHcC
Confidence            555555544433

>COG0421 SpeE Spermidine synthase [Amino acid transport and metabolism]

Probab=95.28  E-value=0.14  Score=45.83  Aligned_cols=92  Identities=20%  Similarity=0.207  Sum_probs=61.5

Q ss_pred             CeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCcE---------EEcCCChhHHHHhhCCccEEE-E
Q 018382          182 LRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGADQ---------YLVSSDATRMQEAADSLDYII-D  250 (357)
Q Consensus       182 ~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~~---------vv~~~~~~~~~~~~~~~d~v~-d  250 (357)
                      ++|||+|+|. |-.+-.++++... +++++.-.++=.+..++.++..+         ++..+...+++.....+|+|| |
T Consensus        78 k~VLiiGgGd-G~tlRevlkh~~ve~i~~VEID~~Vi~~ar~~l~~~~~~~~dpRv~i~i~Dg~~~v~~~~~~fDvIi~D  156 (282)
T COG0421          78 KRVLIIGGGD-GGTLREVLKHLPVERITMVEIDPAVIELARKYLPEPSGGADDPRVEIIIDDGVEFLRDCEEKFDVIIVD  156 (282)
T ss_pred             CeEEEECCCc-cHHHHHHHhcCCcceEEEEEcCHHHHHHHHHhccCcccccCCCceEEEeccHHHHHHhCCCcCCEEEEc
Confidence            5999997643 3445577777765 89998888887888888676322         222222345555555899985 4


Q ss_pred             cCCC---------CCChHHHHhccccCCeEEEE
Q 018382          251 TVPA---------NHPLEPYLSLLKLDGKLILT  274 (357)
Q Consensus       251 ~~g~---------~~~~~~~~~~l~~~G~~v~~  274 (357)
                      +...         .+..+.+.++|+++|.++.-
T Consensus       157 ~tdp~gp~~~Lft~eFy~~~~~~L~~~Gi~v~q  189 (282)
T COG0421         157 STDPVGPAEALFTEEFYEGCRRALKEDGIFVAQ  189 (282)
T ss_pred             CCCCCCcccccCCHHHHHHHHHhcCCCcEEEEe
Confidence            4433         22456788999999999876

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=95.28  E-value=0.13  Score=44.51  Aligned_cols=83  Identities=23%  Similarity=0.322  Sum_probs=61.4

Q ss_pred             eEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHH-HHHhcCCcEE-EcCCChhHHHHhh-CCccEEEEcCCCCCChH
Q 018382          183 RGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVE-AMEHLGADQY-LVSSDATRMQEAA-DSLDYIIDTVPANHPLE  259 (357)
Q Consensus       183 ~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~-~~~~~g~~~v-v~~~~~~~~~~~~-~~~d~v~d~~g~~~~~~  259 (357)
                      +++|.|+|.+|...++.+...|..|+++..++++..+ +.+.++...+ .+..+++.++++. ..+|+++-+++.. ..+
T Consensus         2 ~iiIiG~G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~~~~~~v~gd~t~~~~L~~agi~~aD~vva~t~~d-~~N   80 (225)
T COG0569           2 KIIIIGAGRVGRSVARELSEEGHNVVLIDRDEERVEEFLADELDTHVVIGDATDEDVLEEAGIDDADAVVAATGND-EVN   80 (225)
T ss_pred             EEEEECCcHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhhcceEEEEecCCCHHHHHhcCCCcCCEEEEeeCCC-HHH
Confidence            5788999999999999999999999999999998776 3323443322 3555666677664 4899999999986 455


Q ss_pred             HHHhccc
Q 018382          260 PYLSLLK  266 (357)
Q Consensus       260 ~~~~~l~  266 (357)
                      ..+-.++
T Consensus        81 ~i~~~la   87 (225)
T COG0569          81 SVLALLA   87 (225)
T ss_pred             HHHHHHH
Confidence            4444433

>PRK06523 short chain dehydrogenase; Provisional

Probab=95.26  E-value=0.061  Score=47.47  Aligned_cols=69  Identities=17%  Similarity=0.159  Sum_probs=49.0

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcC--C-cEEEcCCChhHHHHh-------hCCccEE
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLG--A-DQYLVSSDATRMQEA-------ADSLDYI  248 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g--~-~~vv~~~~~~~~~~~-------~~~~d~v  248 (357)
                      +++++||+|+ |++|..+++.+...|++|++++++..+.      .+  . -...|..+.+.++++       .+++|++
T Consensus         8 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~------~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   81 (260)
T PRK06523          8 AGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD------LPEGVEFVAADLTTAEGCAAVARAVLERLGGVDIL   81 (260)
T ss_pred             CCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh------cCCceeEEecCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            5789999987 9999999999988899999999875431      22  1 122355555433322       2378999


Q ss_pred             EEcCCC
Q 018382          249 IDTVPA  254 (357)
Q Consensus       249 ~d~~g~  254 (357)
                      ++++|.
T Consensus        82 i~~ag~   87 (260)
T PRK06523         82 VHVLGG   87 (260)
T ss_pred             EECCcc
Confidence            999873

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=95.25  E-value=0.15  Score=42.47  Aligned_cols=75  Identities=16%  Similarity=0.193  Sum_probs=53.8

Q ss_pred             CCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCC--cEE---EcCCChhHHHH----hh---CCccE
Q 018382          181 GLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGA--DQY---LVSSDATRMQE----AA---DSLDY  247 (357)
Q Consensus       181 ~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~--~~v---v~~~~~~~~~~----~~---~~~d~  247 (357)
                      .+.++|.|+ +++|.+..|.+...|++|.+.+...+..+.....+|.  +|.   .|.++++.+..    ..   +.+++
T Consensus        14 sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~psv   93 (256)
T KOG1200|consen   14 SKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGTPSV   93 (256)
T ss_pred             cceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCCCcE
Confidence            355677776 8999999999999999999999887777777666774  332   24444333332    22   37999


Q ss_pred             EEEcCCCC
Q 018382          248 IIDTVPAN  255 (357)
Q Consensus       248 v~d~~g~~  255 (357)
                      +++|+|-.
T Consensus        94 lVncAGIt  101 (256)
T KOG1200|consen   94 LVNCAGIT  101 (256)
T ss_pred             EEEcCccc
Confidence            99999864

>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences

Probab=95.25  E-value=0.017  Score=51.92  Aligned_cols=129  Identities=25%  Similarity=0.324  Sum_probs=71.2

Q ss_pred             eCcceEECCCCCCccccccccchhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHH
Q 018382          142 DQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEA  220 (357)
Q Consensus       142 ~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~  220 (357)
                      +.+.++.+.+++.|-...--.+.  .+..+|.+.  .++|++||=+|+|. |.+++..++ +|+ +|++++-.+...+.+
T Consensus       127 ~~~~~I~idPg~AFGTG~H~TT~--lcl~~l~~~--~~~g~~vLDvG~GS-GILaiaA~k-lGA~~v~a~DiDp~Av~~a  200 (295)
T PF06325_consen  127 PDEIVIEIDPGMAFGTGHHPTTR--LCLELLEKY--VKPGKRVLDVGCGS-GILAIAAAK-LGAKKVVAIDIDPLAVEAA  200 (295)
T ss_dssp             TTSEEEEESTTSSS-SSHCHHHH--HHHHHHHHH--SSTTSEEEEES-TT-SHHHHHHHH-TTBSEEEEEESSCHHHHHH
T ss_pred             CCcEEEEECCCCcccCCCCHHHH--HHHHHHHHh--ccCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEecCCHHHHHHH
Confidence            34566777777766554311111  112233333  36889999998642 444444444 488 799999888766555


Q ss_pred             HHhcC----CcEEEcCCChhHHHHhhCCccEEEEcCCCCC---ChHHHHhccccCCeEEEEccCCC
Q 018382          221 MEHLG----ADQYLVSSDATRMQEAADSLDYIIDTVPANH---PLEPYLSLLKLDGKLILTGVINT  279 (357)
Q Consensus       221 ~~~~g----~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~---~~~~~~~~l~~~G~~v~~g~~~~  279 (357)
                      ++..-    .+.+.-....+   .....||+|+-..-...   ......+.++++|.+++-|....
T Consensus       201 ~~N~~~N~~~~~~~v~~~~~---~~~~~~dlvvANI~~~vL~~l~~~~~~~l~~~G~lIlSGIl~~  263 (295)
T PF06325_consen  201 RENAELNGVEDRIEVSLSED---LVEGKFDLVVANILADVLLELAPDIASLLKPGGYLILSGILEE  263 (295)
T ss_dssp             HHHHHHTT-TTCEEESCTSC---TCCS-EEEEEEES-HHHHHHHHHHCHHHEEEEEEEEEEEEEGG
T ss_pred             HHHHHHcCCCeeEEEEEecc---cccccCCEEEECCCHHHHHHHHHHHHHhhCCCCEEEEccccHH
Confidence            54221    12221111111   11258999997665541   23345667899999998887654

Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A ....

>PLN02427 UDP-apiose/xylose synthase

Probab=95.24  E-value=0.11  Score=48.86  Aligned_cols=74  Identities=15%  Similarity=0.113  Sum_probs=51.6

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHc-CCeEEEEeCCcHHHHHHHHhcC-------CcE-EEcCCChhHHHHhhCCccEEE
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAM-GHHVTVISSSDKKRVEAMEHLG-------ADQ-YLVSSDATRMQEAADSLDYII  249 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~-g~~V~~~~~~~~~~~~~~~~~g-------~~~-vv~~~~~~~~~~~~~~~d~v~  249 (357)
                      +..+|||+|+ |.+|..+++.+... |.+|++++++.++...+.. .+       .+. ..|..+...+.++..++|+||
T Consensus        13 ~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~-~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~d~Vi   91 (386)
T PLN02427         13 KPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLE-PDTVPWSGRIQFHRINIKHDSRLEGLIKMADLTI   91 (386)
T ss_pred             cCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhc-cccccCCCCeEEEEcCCCChHHHHHHhhcCCEEE
Confidence            3457999987 99999999988877 5899999887665544433 22       111 124455555666666899999


Q ss_pred             EcCCC
Q 018382          250 DTVPA  254 (357)
Q Consensus       250 d~~g~  254 (357)
                      .+++.
T Consensus        92 HlAa~   96 (386)
T PLN02427         92 NLAAI   96 (386)
T ss_pred             Ecccc
Confidence            98863

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=95.23  E-value=0.073  Score=49.89  Aligned_cols=75  Identities=13%  Similarity=0.095  Sum_probs=50.5

Q ss_pred             CCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCc-EEEcCCChhHHHHhhCCccEEEEcCCC
Q 018382          179 QSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGAD-QYLVSSDATRMQEAADSLDYIIDTVPA  254 (357)
Q Consensus       179 ~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~~~~~~d~v~d~~g~  254 (357)
                      ..+.+|||+|+ |.+|..++..+...|.+|+++++.......... ++.. +..|..+.+.+..+..++|+||.+++.
T Consensus        19 ~~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~~~~~-~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~Aa~   95 (370)
T PLN02695         19 SEKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHMSEDM-FCHEFHLVDLRVMENCLKVTKGVDHVFNLAAD   95 (370)
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEecccccccccc-ccceEEECCCCCHHHHHHHHhCCCEEEEcccc
Confidence            45688999987 999999999999999999999875332111001 1222 123445545555555689999999853

>PRK12746 short chain dehydrogenase; Provisional

Probab=95.23  E-value=0.11  Score=45.72  Aligned_cols=75  Identities=12%  Similarity=0.197  Sum_probs=48.9

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEE-eCCcHHHHHHHHhc---CCc---EEEcCCChhHHHH----hh-----
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVI-SSSDKKRVEAMEHL---GAD---QYLVSSDATRMQE----AA-----  242 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~-~~~~~~~~~~~~~~---g~~---~vv~~~~~~~~~~----~~-----  242 (357)
                      .+.+++|+|+ |++|..+++.+...|++|++. .++.++.+...+.+   +..   ...|..+.+.+.+    +.     
T Consensus         5 ~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~   84 (254)
T PRK12746          5 DGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQI   84 (254)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhcc
Confidence            3578999987 999999999888889998775 56655544333222   221   1235555443322    21     


Q ss_pred             ----CCccEEEEcCCC
Q 018382          243 ----DSLDYIIDTVPA  254 (357)
Q Consensus       243 ----~~~d~v~d~~g~  254 (357)
                          .++|++|.++|.
T Consensus        85 ~~~~~~id~vi~~ag~  100 (254)
T PRK12746         85 RVGTSEIDILVNNAGI  100 (254)
T ss_pred             ccCCCCccEEEECCCC
Confidence                258999998875

>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=95.21  E-value=0.21  Score=45.13  Aligned_cols=39  Identities=23%  Similarity=0.255  Sum_probs=34.4

Q ss_pred             CeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHH
Q 018382          182 LRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEA  220 (357)
Q Consensus       182 ~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~  220 (357)
                      ++|.|+|+|.+|...++.+...|.+|++.++++++.+.+
T Consensus         4 ~~I~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~l~~~   42 (291)
T PRK06035          4 KVIGVVGSGVMGQGIAQVFARTGYDVTIVDVSEEILKNA   42 (291)
T ss_pred             cEEEEECccHHHHHHHHHHHhcCCeEEEEeCCHHHHHHH
Confidence            579999999999999999988899999999998876643

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=95.21  E-value=0.14  Score=44.77  Aligned_cols=76  Identities=20%  Similarity=0.200  Sum_probs=48.4

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeC-CcHHHHHHHH---hcCCcEE---EcCCChhHHHH----h---hCC
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISS-SDKKRVEAME---HLGADQY---LVSSDATRMQE----A---ADS  244 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~-~~~~~~~~~~---~~g~~~v---v~~~~~~~~~~----~---~~~  244 (357)
                      +++++||+|+ |++|..+++.+...|++|++..+ .+.+.....+   ..+....   .|..+.+.+.+    +   .++
T Consensus         2 ~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (246)
T PRK12938          2 SQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGE   81 (246)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            3578899987 99999999999999999888553 2333222211   1343322   35555433322    2   247


Q ss_pred             ccEEEEcCCCC
Q 018382          245 LDYIIDTVPAN  255 (357)
Q Consensus       245 ~d~v~d~~g~~  255 (357)
                      +|++++++|..
T Consensus        82 id~li~~ag~~   92 (246)
T PRK12938         82 IDVLVNNAGIT   92 (246)
T ss_pred             CCEEEECCCCC
Confidence            99999998853

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.20  E-value=0.11  Score=45.58  Aligned_cols=75  Identities=17%  Similarity=0.137  Sum_probs=48.8

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeC-CcHHHHHHHHhcCCc-E--EEcCCChhHHHHh----h---CC-cc
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISS-SDKKRVEAMEHLGAD-Q--YLVSSDATRMQEA----A---DS-LD  246 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~-~~~~~~~~~~~~g~~-~--vv~~~~~~~~~~~----~---~~-~d  246 (357)
                      .++++||+|+ |++|..++..+...|++|+++.+ ++++.+.+...++.. .  ..|..+.+.+++.    .   +. +|
T Consensus         4 ~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~id   83 (253)
T PRK08642          4 SEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHFGKPIT   83 (253)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCe
Confidence            3578999987 99999999988888999988654 444444444435422 1  2355454333222    1   23 99


Q ss_pred             EEEEcCCC
Q 018382          247 YIIDTVPA  254 (357)
Q Consensus       247 ~v~d~~g~  254 (357)
                      ++|.++|.
T Consensus        84 ~li~~ag~   91 (253)
T PRK08642         84 TVVNNALA   91 (253)
T ss_pred             EEEECCCc
Confidence            99998763

>PRK07577 short chain dehydrogenase; Provisional

Probab=95.19  E-value=0.088  Score=45.56  Aligned_cols=69  Identities=20%  Similarity=0.181  Sum_probs=48.6

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCC-cEEEcCCChhHHHHhh------CCccEEEEc
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGA-DQYLVSSDATRMQEAA------DSLDYIIDT  251 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~-~~vv~~~~~~~~~~~~------~~~d~v~d~  251 (357)
                      .++++||+|+ |++|..+++.+...|.+|+++.++.++     . +.. -...|..+.+.+++..      .+.|++|.+
T Consensus         2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~-----~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~   75 (234)
T PRK07577          2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAID-----D-FPGELFACDLADIEQTAATLAQINEIHPVDAIVNN   75 (234)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCccc-----c-cCceEEEeeCCCHHHHHHHHHHHHHhCCCcEEEEC
Confidence            3578999987 999999999998899999999987654     1 221 1234555544333322      268999998


Q ss_pred             CCC
Q 018382          252 VPA  254 (357)
Q Consensus       252 ~g~  254 (357)
                      +|.
T Consensus        76 ag~   78 (234)
T PRK07577         76 VGI   78 (234)
T ss_pred             CCC
Confidence            875

>TIGR02371 ala_DH_arch alanine dehydrogenase, Archaeoglobus fulgidus type

Probab=95.18  E-value=0.17  Score=46.45  Aligned_cols=100  Identities=14%  Similarity=0.155  Sum_probs=65.8

Q ss_pred             hccCCCCCCCeEEEEecChHHHHHHHHHHHc-CC-eEEEEeCCcHHHHHHHHh---cCCcEEEcCCChhHHHHhhCCccE
Q 018382          173 SHFGLKQSGLRGGILGLGGVGHMGVLIAKAM-GH-HVTVISSSDKKRVEAMEH---LGADQYLVSSDATRMQEAADSLDY  247 (357)
Q Consensus       173 ~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~-g~-~V~~~~~~~~~~~~~~~~---~g~~~vv~~~~~~~~~~~~~~~d~  247 (357)
                      +.+.+ +...++.|+|+|..|.+.++.+... .. +|++..++.++.+.+.++   +|..... ..   ..++...+.|+
T Consensus       121 ~~La~-~~~~~lgiiG~G~qA~~~l~al~~~~~~~~v~V~~r~~~~~~~~~~~~~~~g~~v~~-~~---~~~eav~~aDi  195 (325)
T TIGR02371       121 KYLAR-KDSSVLGIIGAGRQAWTQLEALSRVFDLEEVSVYCRTPSTREKFALRASDYEVPVRA-AT---DPREAVEGCDI  195 (325)
T ss_pred             HHhCC-CCCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHhhCCcEEE-eC---CHHHHhccCCE
Confidence            44444 4568889999999999876665543 44 899999998887665543   3432111 11   23345568999


Q ss_pred             EEEcCCCCCChHHHHhccccCCeEEEEccCC
Q 018382          248 IIDTVPANHPLEPYLSLLKLDGKLILTGVIN  278 (357)
Q Consensus       248 v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~  278 (357)
                      |+-|+.+...+ ...+.++++-.+..+|...
T Consensus       196 VitaT~s~~P~-~~~~~l~~g~~v~~vGs~~  225 (325)
T TIGR02371       196 LVTTTPSRKPV-VKADWVSEGTHINAIGADA  225 (325)
T ss_pred             EEEecCCCCcE-ecHHHcCCCCEEEecCCCC
Confidence            99988765322 1345678888888888653

This enzyme, a homolog of bacterial ornithine cyclodeaminases and marsupial mu-crystallins, is a homodimeric, NAD-dependent alanine dehydrogenase found in Archaeoglobus fulgidus and several other Archaea. For a number of close homologs, scoring between trusted and noise cutoffs, it is not clear at present what is the enzymatic activity.

>PRK05855 short chain dehydrogenase; Validated

Probab=95.18  E-value=0.088  Score=52.29  Aligned_cols=76  Identities=22%  Similarity=0.211  Sum_probs=53.6

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCCc---EEEcCCChhHHHHhh-------CCc
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGAD---QYLVSSDATRMQEAA-------DSL  245 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~~---~vv~~~~~~~~~~~~-------~~~  245 (357)
                      .+.++||+|+ |++|.++++-+...|++|+++++++++.+.+.+.   .|..   ...|..+.+.+.++.       +.+
T Consensus       314 ~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i  393 (582)
T PRK05855        314 SGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGVP  393 (582)
T ss_pred             CCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence            3578999987 9999999999888999999999988766544332   3421   124556654433322       368


Q ss_pred             cEEEEcCCCC
Q 018382          246 DYIIDTVPAN  255 (357)
Q Consensus       246 d~v~d~~g~~  255 (357)
                      |++++++|..
T Consensus       394 d~lv~~Ag~~  403 (582)
T PRK05855        394 DIVVNNAGIG  403 (582)
T ss_pred             cEEEECCccC
Confidence            9999998763

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=95.17  E-value=0.091  Score=47.99  Aligned_cols=75  Identities=12%  Similarity=0.085  Sum_probs=50.5

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHH---HHHhcC---CcEEE--cCCChhHHHHhhCCccEEEE
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVE---AMEHLG---ADQYL--VSSDATRMQEAADSLDYIID  250 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~---~~~~~g---~~~vv--~~~~~~~~~~~~~~~d~v~d  250 (357)
                      .+++|||+|+ |.+|..++..+...|.+|++++++..+...   +....+   .-..+  |..+++.+..+..++|+||.
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih   82 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVDGCEGVFH   82 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHcCCCEEEE
Confidence            3578999986 999999999998889999998876543221   111011   11222  44445556666668999999


Q ss_pred             cCCC
Q 018382          251 TVPA  254 (357)
Q Consensus       251 ~~g~  254 (357)
                      +++.
T Consensus        83 ~A~~   86 (322)
T PLN02662         83 TASP   86 (322)
T ss_pred             eCCc
Confidence            8863

>PRK08317 hypothetical protein; Provisional

Probab=95.16  E-value=0.092  Score=45.54  Aligned_cols=99  Identities=22%  Similarity=0.249  Sum_probs=63.0

Q ss_pred             CCCCCCeEEEEecChHHHHHHHHHHHcC--CeEEEEeCCcHHHHHHHHhc---CCcEEEcCCChhHHHHhhCCccEEEEc
Q 018382          177 LKQSGLRGGILGLGGVGHMGVLIAKAMG--HHVTVISSSDKKRVEAMEHL---GADQYLVSSDATRMQEAADSLDYIIDT  251 (357)
Q Consensus       177 ~~~~~~~VlI~G~g~~G~~ai~la~~~g--~~V~~~~~~~~~~~~~~~~~---g~~~vv~~~~~~~~~~~~~~~d~v~d~  251 (357)
                      .+.++++||.+|+|. |..+..+++..+  .++++++.+++..+.+++..   +....+...+........+.+|+|+..
T Consensus        16 ~~~~~~~vLdiG~G~-G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~   94 (241)
T PRK08317         16 AVQPGDRVLDVGCGP-GNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRGDADGLPFPDGSFDAVRSD   94 (241)
T ss_pred             CCCCCCEEEEeCCCC-CHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEecccccCCCCCCCceEEEEe
Confidence            347889999999865 788888888763  58999999988777776631   111111111111111112468888753


Q ss_pred             C-----CC-CCChHHHHhccccCCeEEEEcc
Q 018382          252 V-----PA-NHPLEPYLSLLKLDGKLILTGV  276 (357)
Q Consensus       252 ~-----g~-~~~~~~~~~~l~~~G~~v~~g~  276 (357)
                      .     .. ...+..+.++|+++|.++....
T Consensus        95 ~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~  125 (241)
T PRK08317         95 RVLQHLEDPARALAEIARVLRPGGRVVVLDT  125 (241)
T ss_pred             chhhccCCHHHHHHHHHHHhcCCcEEEEEec
Confidence            2     11 1256778899999999987653

>PRK08300 acetaldehyde dehydrogenase; Validated

Probab=95.15  E-value=0.47  Score=42.77  Aligned_cols=91  Identities=18%  Similarity=0.188  Sum_probs=54.2

Q ss_pred             CeEEEEecChHHHH-HHHHHHHcCCeEEEEeCCcHH---HHHHHHhcCCcEEEcCCChhHHHHh--hCCccEEEEcCCCC
Q 018382          182 LRGGILGLGGVGHM-GVLIAKAMGHHVTVISSSDKK---RVEAMEHLGADQYLVSSDATRMQEA--ADSLDYIIDTVPAN  255 (357)
Q Consensus       182 ~~VlI~G~g~~G~~-ai~la~~~g~~V~~~~~~~~~---~~~~~~~~g~~~vv~~~~~~~~~~~--~~~~d~v~d~~g~~  255 (357)
                      -+|.|+|+|.+|.. +..+.+.-+.++.+++..+..   ...+++ +|.....  .+.+.+.+.  ...+|+||++++..
T Consensus         5 lrVAIIGtG~IGt~hm~~l~~~~~velvAVvdid~es~gla~A~~-~Gi~~~~--~~ie~LL~~~~~~dIDiVf~AT~a~   81 (302)
T PRK08300          5 LKVAIIGSGNIGTDLMIKILRSEHLEPGAMVGIDPESDGLARARR-LGVATSA--EGIDGLLAMPEFDDIDIVFDATSAG   81 (302)
T ss_pred             CeEEEEcCcHHHHHHHHHHhcCCCcEEEEEEeCChhhHHHHHHHH-cCCCccc--CCHHHHHhCcCCCCCCEEEECCCHH
Confidence            46899999999987 444445446788877654332   244444 8854332  222222221  14699999999987


Q ss_pred             CChHHHHhccccCCeEEEEc
Q 018382          256 HPLEPYLSLLKLDGKLILTG  275 (357)
Q Consensus       256 ~~~~~~~~~l~~~G~~v~~g  275 (357)
                      ...+.+.++.+.|-.++...
T Consensus        82 ~H~e~a~~a~eaGk~VID~s  101 (302)
T PRK08300         82 AHVRHAAKLREAGIRAIDLT  101 (302)
T ss_pred             HHHHHHHHHHHcCCeEEECC
Confidence            44455555555555555543

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=95.15  E-value=0.054  Score=49.50  Aligned_cols=71  Identities=17%  Similarity=0.151  Sum_probs=52.2

Q ss_pred             eEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcE-EEcCCChhHHHHhhCCccEEEEcCCC
Q 018382          183 RGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQ-YLVSSDATRMQEAADSLDYIIDTVPA  254 (357)
Q Consensus       183 ~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~~~~d~v~d~~g~  254 (357)
                      +|||+|+ |.+|..+++.+...|.+|+++++++++.....+ .+... ..|..+.+.+.+...++|+||++++.
T Consensus         2 ~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~D~~~~~~l~~~~~~~d~vi~~a~~   74 (328)
T TIGR03466         2 KVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLEG-LDVEIVEGDLRDPASLRKAVAGCRALFHVAAD   74 (328)
T ss_pred             eEEEECCccchhHHHHHHHHHCCCEEEEEEecCcccccccc-CCceEEEeeCCCHHHHHHHHhCCCEEEEecee
Confidence            6899987 999999999998889999999987665433322 34332 23556666666666789999998754

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PRK08309 short chain dehydrogenase; Provisional

Probab=95.15  E-value=0.58  Score=38.87  Aligned_cols=86  Identities=15%  Similarity=0.103  Sum_probs=54.1

Q ss_pred             eEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCC---cE--EEcCCChhHHHHh-------hCCccEEEE
Q 018382          183 RGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGA---DQ--YLVSSDATRMQEA-------ADSLDYIID  250 (357)
Q Consensus       183 ~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~---~~--vv~~~~~~~~~~~-------~~~~d~v~d  250 (357)
                      +++|+|++++|..+++.+...|++|++..+++++.+.+...++.   -.  ..|.++.+.+.+.       .+++|++|+
T Consensus         2 ~vlVtGGtG~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~lv~   81 (177)
T PRK08309          2 HALVIGGTGMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNGPFDLAVA   81 (177)
T ss_pred             EEEEECcCHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeEEEE
Confidence            57899875566566666667799999999887776655443431   11  1366665443332       136899999


Q ss_pred             cCCCCCChHHHHhccccCC
Q 018382          251 TVPANHPLEPYLSLLKLDG  269 (357)
Q Consensus       251 ~~g~~~~~~~~~~~l~~~G  269 (357)
                      .+... .-+......+..|
T Consensus        82 ~vh~~-~~~~~~~~~~~~g   99 (177)
T PRK08309         82 WIHSS-AKDALSVVCRELD   99 (177)
T ss_pred             ecccc-chhhHHHHHHHHc
Confidence            88776 4445555555444

>PRK13255 thiopurine S-methyltransferase; Reviewed

Probab=95.11  E-value=0.15  Score=43.94  Aligned_cols=94  Identities=15%  Similarity=0.105  Sum_probs=57.8

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEE---------cCC-----ChhHHH---Hh
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYL---------VSS-----DATRMQ---EA  241 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv---------~~~-----~~~~~~---~~  241 (357)
                      .++.+||+.|+|. |.-++-||. .|.+|++++.++...+.+.++-+.....         ...     ..+...   ..
T Consensus        36 ~~~~rvL~~gCG~-G~da~~LA~-~G~~V~avD~s~~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~D~~~l~~~~  113 (218)
T PRK13255         36 PAGSRVLVPLCGK-SLDMLWLAE-QGHEVLGVELSELAVEQFFAENGLTPQTRQSGEFEHYQAGEITIYCGDFFALTAAD  113 (218)
T ss_pred             CCCCeEEEeCCCC-hHhHHHHHh-CCCeEEEEccCHHHHHHHHHHcCCCccccccccccccccCceEEEECcccCCCccc
Confidence            4678999998853 566666665 6999999999998877664434422100         000     001111   11


Q ss_pred             hCCccEEEEcCCC--------CCChHHHHhccccCCeEEEE
Q 018382          242 ADSLDYIIDTVPA--------NHPLEPYLSLLKLDGKLILT  274 (357)
Q Consensus       242 ~~~~d~v~d~~g~--------~~~~~~~~~~l~~~G~~v~~  274 (357)
                      ...+|.|+|..--        ...+..+.+.|+|+|+++.+
T Consensus       114 ~~~fd~v~D~~~~~~l~~~~R~~~~~~l~~lL~pgG~~~l~  154 (218)
T PRK13255        114 LADVDAVYDRAALIALPEEMRERYVQQLAALLPAGCRGLLV  154 (218)
T ss_pred             CCCeeEEEehHhHhhCCHHHHHHHHHHHHHHcCCCCeEEEE
Confidence            1368999986531        12467788899999975543

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=95.11  E-value=0.14  Score=45.26  Aligned_cols=75  Identities=17%  Similarity=0.128  Sum_probs=50.0

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcH-HHHHHHH---hcCCc---EEEcCCChhHHHHh-------hCC
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDK-KRVEAME---HLGAD---QYLVSSDATRMQEA-------ADS  244 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~-~~~~~~~---~~g~~---~vv~~~~~~~~~~~-------~~~  244 (357)
                      +++++||+|+ |++|..+++.+...|++|+++.+++. ....+.+   ..+..   ...|..+.+.+.++       .++
T Consensus         6 ~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~   85 (261)
T PRK08936          6 EGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEFGT   85 (261)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            5789999987 99999999999999999988877543 2222221   13422   22455554433332       136


Q ss_pred             ccEEEEcCCC
Q 018382          245 LDYIIDTVPA  254 (357)
Q Consensus       245 ~d~v~d~~g~  254 (357)
                      +|+++.++|.
T Consensus        86 id~lv~~ag~   95 (261)
T PRK08936         86 LDVMINNAGI   95 (261)
T ss_pred             CCEEEECCCC
Confidence            8999998875

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=95.10  E-value=0.29  Score=37.25  Aligned_cols=90  Identities=20%  Similarity=0.186  Sum_probs=59.8

Q ss_pred             EEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEE-cCCChhHHHHhh-CCccEEEEcCCCCCChHH-
Q 018382          184 GGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYL-VSSDATRMQEAA-DSLDYIIDTVPANHPLEP-  260 (357)
Q Consensus       184 VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv-~~~~~~~~~~~~-~~~d~v~d~~g~~~~~~~-  260 (357)
                      |+|.|.|.+|...++.++..+.+|++++.++++.+.+.+ .|...+. |..+++.+++.. ..++.++-+.+....-.. 
T Consensus         1 vvI~G~g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~-~~~~~i~gd~~~~~~l~~a~i~~a~~vv~~~~~d~~n~~~   79 (116)
T PF02254_consen    1 VVIIGYGRIGREIAEQLKEGGIDVVVIDRDPERVEELRE-EGVEVIYGDATDPEVLERAGIEKADAVVILTDDDEENLLI   79 (116)
T ss_dssp             EEEES-SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHH-TTSEEEES-TTSHHHHHHTTGGCESEEEEESSSHHHHHHH
T ss_pred             eEEEcCCHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHh-cccccccccchhhhHHhhcCccccCEEEEccCCHHHHHHH
Confidence            578899999999999999966699999999999888888 6644332 334455555553 378888877776422112 


Q ss_pred             --HHhccccCCeEEEE
Q 018382          261 --YLSLLKLDGKLILT  274 (357)
Q Consensus       261 --~~~~l~~~G~~v~~  274 (357)
                        .++.+.+..+++..
T Consensus        80 ~~~~r~~~~~~~ii~~   95 (116)
T PF02254_consen   80 ALLARELNPDIRIIAR   95 (116)
T ss_dssp             HHHHHHHTTTSEEEEE
T ss_pred             HHHHHHHCCCCeEEEE
Confidence              23334455555533

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.10  E-value=0.15  Score=45.46  Aligned_cols=96  Identities=16%  Similarity=0.236  Sum_probs=71.3

Q ss_pred             cccchhhhhhhhhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHH
Q 018382          160 PLLCAGVTVFSPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRM  238 (357)
Q Consensus       160 ~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~  238 (357)
                      .+||........|...+.--.|++|+|+|. +.+|.-++.++...|++|++..+.. +                    .+
T Consensus       137 ~~PcTp~avi~lL~~~~i~l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~s~t-~--------------------~l  195 (284)
T PRK14179        137 MIPCTPAGIMEMFREYNVELEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLTHSRT-R--------------------NL  195 (284)
T ss_pred             CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEECCCC-C--------------------CH
Confidence            467776666666766655458999999997 9999999999999999998862211 1                    12


Q ss_pred             HHhhCCccEEEEcCCCCCChHHHHhccccCCeEEEEccCC
Q 018382          239 QEAADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVIN  278 (357)
Q Consensus       239 ~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~  278 (357)
                      ++.....|+|+-++|.+..+...  .++++-.++++|...
T Consensus       196 ~~~~~~ADIVI~avg~~~~v~~~--~ik~GavVIDvgin~  233 (284)
T PRK14179        196 AEVARKADILVVAIGRGHFVTKE--FVKEGAVVIDVGMNR  233 (284)
T ss_pred             HHHHhhCCEEEEecCccccCCHH--HccCCcEEEEeccee
Confidence            34455799999999998665544  488998898888653

>PRK13403 ketol-acid reductoisomerase; Provisional

Probab=95.09  E-value=0.21  Score=45.30  Aligned_cols=88  Identities=18%  Similarity=0.203  Sum_probs=61.9

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCCC-
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHP-  257 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~-  257 (357)
                      -.+++|.|+|-|.+|.++++.++..|.+|++..+.....+.+.. .|.. +.      .+.++....|+|+-++..... 
T Consensus        14 LkgKtVGIIG~GsIG~amA~nL~d~G~~ViV~~r~~~s~~~A~~-~G~~-v~------sl~Eaak~ADVV~llLPd~~t~   85 (335)
T PRK13403         14 LQGKTVAVIGYGSQGHAQAQNLRDSGVEVVVGVRPGKSFEVAKA-DGFE-VM------SVSEAVRTAQVVQMLLPDEQQA   85 (335)
T ss_pred             hCcCEEEEEeEcHHHHHHHHHHHHCcCEEEEEECcchhhHHHHH-cCCE-EC------CHHHHHhcCCEEEEeCCChHHH
Confidence            36789999999999999999999999999988765444344444 6753 21      244566678999988876422 


Q ss_pred             --h-HHHHhccccCCeEEEE
Q 018382          258 --L-EPYLSLLKLDGKLILT  274 (357)
Q Consensus       258 --~-~~~~~~l~~~G~~v~~  274 (357)
                        + ...+..|+++..++..
T Consensus        86 ~V~~~eil~~MK~GaiL~f~  105 (335)
T PRK13403         86 HVYKAEVEENLREGQMLLFS  105 (335)
T ss_pred             HHHHHHHHhcCCCCCEEEEC
Confidence              2 2356677777665543

>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]

Probab=95.08  E-value=0.2  Score=45.17  Aligned_cols=62  Identities=24%  Similarity=0.245  Sum_probs=46.4

Q ss_pred             hhhhh---hccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCC---cHHHHHHHHhcCCcEEE
Q 018382          168 VFSPL---SHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSS---DKKRVEAMEHLGADQYL  230 (357)
Q Consensus       168 a~~~l---~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~---~~~~~~~~~~~g~~~vv  230 (357)
                      ||.++   ++.+.+.||+++||=.. |.+|...+-++...|++++++.+.   .+|+..++. ||+.-+.
T Consensus        87 a~sMi~~Ae~~G~i~pg~stliEpTSGNtGigLA~~~a~~Gyk~i~tmP~~ms~Ek~~~l~a-~Gaeii~  155 (362)
T KOG1252|consen   87 AWSMIEDAEKKGLITPGKSTLIEPTSGNTGIGLAYMAALRGYKCIITMPEKMSKEKRILLRA-LGAEIIL  155 (362)
T ss_pred             HHHHHHHHHHcCCccCCceEEEecCCCchHHHHHHHHHHcCceEEEEechhhhHHHHHHHHH-cCCEEEe
Confidence            45555   34567799999999875 888998999999999999988743   345555555 8876554

>PRK07402 precorrin-6B methylase; Provisional

Probab=95.04  E-value=0.4  Score=40.49  Aligned_cols=98  Identities=16%  Similarity=0.119  Sum_probs=57.6

Q ss_pred             CCCCCeEEEEecChHHHHHHHHHHHc-CCeEEEEeCCcHHHHHHHHh---cCCc--EEEcCCChhHHHHhhCCccEEEEc
Q 018382          178 KQSGLRGGILGLGGVGHMGVLIAKAM-GHHVTVISSSDKKRVEAMEH---LGAD--QYLVSSDATRMQEAADSLDYIIDT  251 (357)
Q Consensus       178 ~~~~~~VlI~G~g~~G~~ai~la~~~-g~~V~~~~~~~~~~~~~~~~---~g~~--~vv~~~~~~~~~~~~~~~d~v~d~  251 (357)
                      .+++++||=+|+|. |..++.+++.. +.+|++++.+++..+.++++   ++.+  .++..+..+.+..+...+|.++-.
T Consensus        38 ~~~~~~VLDiG~G~-G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~d~v~~~  116 (196)
T PRK07402         38 LEPDSVLWDIGAGT-GTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVEVIEGSAPECLAQLAPAPDRVCIE  116 (196)
T ss_pred             CCCCCEEEEeCCCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeEEEECchHHHHhhCCCCCCEEEEE
Confidence            37888888887632 44455555544 46999999998877666542   4543  233322222233333334554332


Q ss_pred             CCCC--CChHHHHhccccCCeEEEEcc
Q 018382          252 VPAN--HPLEPYLSLLKLDGKLILTGV  276 (357)
Q Consensus       252 ~g~~--~~~~~~~~~l~~~G~~v~~g~  276 (357)
                      .+..  ..++.+.+.|+++|+++....
T Consensus       117 ~~~~~~~~l~~~~~~LkpgG~li~~~~  143 (196)
T PRK07402        117 GGRPIKEILQAVWQYLKPGGRLVATAS  143 (196)
T ss_pred             CCcCHHHHHHHHHHhcCCCeEEEEEee
Confidence            2221  246778889999999887643

>PRK06522 2-dehydropantoate 2-reductase; Reviewed

Probab=95.04  E-value=0.15  Score=46.28  Aligned_cols=90  Identities=23%  Similarity=0.216  Sum_probs=58.6

Q ss_pred             eEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcE-----EEcCCChhHHHHhhCCccEEEEcCCCCCC
Q 018382          183 RGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQ-----YLVSSDATRMQEAADSLDYIIDTVPANHP  257 (357)
Q Consensus       183 ~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~-----vv~~~~~~~~~~~~~~~d~v~d~~g~~~~  257 (357)
                      +|+|+|+|.+|.+.+..+...|.+|+++++++++.+.+.+ .|...     .......+..... ..+|+||-++... .
T Consensus         2 ~I~IiG~G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~-~~~d~vila~k~~-~   78 (304)
T PRK06522          2 KIAILGAGAIGGLFGAALAQAGHDVTLVARRGAHLDALNE-NGLRLEDGEITVPVLAADDPAEL-GPQDLVILAVKAY-Q   78 (304)
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCeEEEEECChHHHHHHHH-cCCcccCCceeecccCCCChhHc-CCCCEEEEecccc-c
Confidence            5889999999999888888889999999997777766665 45421     0000000111223 6799999988876 4


Q ss_pred             hHHHHhccc----cCCeEEEEc
Q 018382          258 LEPYLSLLK----LDGKLILTG  275 (357)
Q Consensus       258 ~~~~~~~l~----~~G~~v~~g  275 (357)
                      ...+++.++    ++..++.+.
T Consensus        79 ~~~~~~~l~~~l~~~~~iv~~~  100 (304)
T PRK06522         79 LPAALPSLAPLLGPDTPVLFLQ  100 (304)
T ss_pred             HHHHHHHHhhhcCCCCEEEEec
Confidence            555555544    344566553

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=95.00  E-value=0.11  Score=44.95  Aligned_cols=72  Identities=21%  Similarity=0.170  Sum_probs=53.3

Q ss_pred             EEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCC-cEEEcCCChhHHHHhhC--CccEEEEcCCCC
Q 018382          184 GGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGA-DQYLVSSDATRMQEAAD--SLDYIIDTVPAN  255 (357)
Q Consensus       184 VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~-~~vv~~~~~~~~~~~~~--~~d~v~d~~g~~  255 (357)
                      |||+|+ |-+|..++..+...|.+|+.+.++............. ....|..+.+.++.+..  .+|.||.+++..
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a~~~   76 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKLNVEFVIGDLTDKEQLEKLLEKANIDVVIHLAAFS   76 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHTTEEEEESETTSHHHHHHHHHHHTESEEEEEBSSS
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccceEEEEEeeccccccccccccccCceEEEEeeccc
Confidence            789987 9999999999999999999888887765544442332 22346666666665554  679999998864

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional

Probab=95.00  E-value=0.31  Score=45.36  Aligned_cols=92  Identities=18%  Similarity=0.274  Sum_probs=63.1

Q ss_pred             CeEEEEec-ChHHHHHHHHHHHc--CCeEEEEe--CCcHHHHHHHHhcCCcEEEcCCCh--hHH----------------
Q 018382          182 LRGGILGL-GGVGHMGVLIAKAM--GHHVTVIS--SSDKKRVEAMEHLGADQYLVSSDA--TRM----------------  238 (357)
Q Consensus       182 ~~VlI~G~-g~~G~~ai~la~~~--g~~V~~~~--~~~~~~~~~~~~~g~~~vv~~~~~--~~~----------------  238 (357)
                      ++|.|+|+ |.+|..++++++..  ..+|++.+  ++.++.....++|+...++-.+..  ..+                
T Consensus         2 k~VaILGsTGSIG~~tL~vi~~~p~~f~VvaLaa~~n~~~l~~q~~~f~p~~v~i~~~~~~~~l~~~l~~~~~~v~~G~~   81 (385)
T PRK05447          2 KRITILGSTGSIGTQTLDVIRRNPDRFRVVALSAGKNVELLAEQAREFRPKYVVVADEEAAKELKEALAAAGIEVLAGEE   81 (385)
T ss_pred             ceEEEEcCChHHHHHHHHHHHhCccccEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHhhccCCceEEEChh
Confidence            57899996 99999999998765  45888776  444566666666888776544331  111                


Q ss_pred             --HHhhC--CccEEEEcCCCCCChHHHHhccccCCeEEE
Q 018382          239 --QEAAD--SLDYIIDTVPANHPLEPYLSLLKLDGKLIL  273 (357)
Q Consensus       239 --~~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~  273 (357)
                        .++..  .+|+|+++.++...+...+..++.|-++.+
T Consensus        82 ~~~~l~~~~~vD~Vv~Ai~G~aGl~ptl~Ai~aGK~VaL  120 (385)
T PRK05447         82 GLCELAALPEADVVVAAIVGAAGLLPTLAAIRAGKRIAL  120 (385)
T ss_pred             HHHHHhcCCCCCEEEEeCcCcccHHHHHHHHHCCCcEEE
Confidence              11111  589999998886567778888877766554

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=95.00  E-value=0.43  Score=44.53  Aligned_cols=76  Identities=8%  Similarity=0.009  Sum_probs=46.9

Q ss_pred             CCCCeEEEEec-ChHHHH--HHHHHHHcCCeEEEEeCCcH--H-------------HHHHHHhcCCc-EE--EcCCChhH
Q 018382          179 QSGLRGGILGL-GGVGHM--GVLIAKAMGHHVTVISSSDK--K-------------RVEAMEHLGAD-QY--LVSSDATR  237 (357)
Q Consensus       179 ~~~~~VlI~G~-g~~G~~--ai~la~~~g~~V~~~~~~~~--~-------------~~~~~~~~g~~-~v--v~~~~~~~  237 (357)
                      ..++++||+|+ +++|++  .++.+ ..|++|+++....+  +             ...+.+..|.. ..  .|..+++.
T Consensus        39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~  117 (398)
T PRK13656         39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEI  117 (398)
T ss_pred             CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHH
Confidence            34578999986 899999  45666 78999888873221  1             22223335643 22  34444433


Q ss_pred             ----HHHhh---CCccEEEEcCCCC
Q 018382          238 ----MQEAA---DSLDYIIDTVPAN  255 (357)
Q Consensus       238 ----~~~~~---~~~d~v~d~~g~~  255 (357)
                          ++++.   +++|+++++++.+
T Consensus       118 v~~lie~I~e~~G~IDiLVnSaA~~  142 (398)
T PRK13656        118 KQKVIELIKQDLGQVDLVVYSLASP  142 (398)
T ss_pred             HHHHHHHHHHhcCCCCEEEECCccC
Confidence                23332   3799999998876

>PRK14967 putative methyltransferase; Provisional

Probab=94.99  E-value=0.24  Score=42.80  Aligned_cols=92  Identities=25%  Similarity=0.269  Sum_probs=58.9

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHh---cCCcEEEcCCChhHHHHh-hCCccEEEEcCC
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEH---LGADQYLVSSDATRMQEA-ADSLDYIIDTVP  253 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~---~g~~~vv~~~~~~~~~~~-~~~~d~v~d~~g  253 (357)
                      +++++||-+|+|. |..++.+++. +. +|++++.++...+.++++   .+.+..+...+  ..... .+.+|+|+...+
T Consensus        35 ~~~~~vLDlGcG~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~~d--~~~~~~~~~fD~Vi~npP  110 (223)
T PRK14967         35 GPGRRVLDLCTGS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVRRGD--WARAVEFRPFDVVVSNPP  110 (223)
T ss_pred             CCCCeEEEecCCH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEECc--hhhhccCCCeeEEEECCC
Confidence            7889999999976 8888888775 66 999999988776654442   34322222222  21222 247999986432


Q ss_pred             CC---------------------------CChHHHHhccccCCeEEEE
Q 018382          254 AN---------------------------HPLEPYLSLLKLDGKLILT  274 (357)
Q Consensus       254 ~~---------------------------~~~~~~~~~l~~~G~~v~~  274 (357)
                      -.                           ..+..+.+.|+++|+++.+
T Consensus       111 y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~gG~l~~~  158 (223)
T PRK14967        111 YVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPGGSLLLV  158 (223)
T ss_pred             CCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence            10                           0234567889999998865

>PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=94.99  E-value=0.19  Score=48.78  Aligned_cols=73  Identities=16%  Similarity=0.200  Sum_probs=48.7

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCC
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPAN  255 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~  255 (357)
                      -.+++|+|+|.|+.|++++++++..|++|++.++.......+.+++|.......+..+.   + ..+|.|+-+.|-.
T Consensus        13 ~~~~~v~v~G~G~sG~a~a~~L~~~G~~V~~~D~~~~~~~~~l~~~gi~~~~~~~~~~~---~-~~~d~vV~Spgi~   85 (473)
T PRK00141         13 ELSGRVLVAGAGVSGRGIAAMLSELGCDVVVADDNETARHKLIEVTGVADISTAEASDQ---L-DSFSLVVTSPGWR   85 (473)
T ss_pred             ccCCeEEEEccCHHHHHHHHHHHHCCCEEEEECCChHHHHHHHHhcCcEEEeCCCchhH---h-cCCCEEEeCCCCC
Confidence            34578999999999999999999999999998876554433334367644332222221   2 3567777655443

>PRK06046 alanine dehydrogenase; Validated

Probab=94.98  E-value=0.2  Score=46.00  Aligned_cols=99  Identities=20%  Similarity=0.318  Sum_probs=63.5

Q ss_pred             hccCCCCCCCeEEEEecChHHHHHHHHHH-HcCC-eEEEEeCCcHHHHHHHHhc----CCcEEEcCCChhHHHHhhCCcc
Q 018382          173 SHFGLKQSGLRGGILGLGGVGHMGVLIAK-AMGH-HVTVISSSDKKRVEAMEHL----GADQYLVSSDATRMQEAADSLD  246 (357)
Q Consensus       173 ~~~~~~~~~~~VlI~G~g~~G~~ai~la~-~~g~-~V~~~~~~~~~~~~~~~~~----g~~~vv~~~~~~~~~~~~~~~d  246 (357)
                      ....+ ....++.|+|+|..|...++.+. ..+. +|.+..++.++.+.+.+++    |....+ ..+   .++... .|
T Consensus       122 ~~La~-~~~~~vgiiG~G~qa~~h~~al~~~~~i~~v~v~~r~~~~~~~~~~~~~~~~~~~v~~-~~~---~~~~l~-aD  195 (326)
T PRK06046        122 KYLAR-KDSKVVGIIGAGNQARTQLLALSEVFDLEEVRVYDRTKSSAEKFVERMSSVVGCDVTV-AED---IEEACD-CD  195 (326)
T ss_pred             HHhCC-CCCCEEEEECCcHHHHHHHHHHHhhCCceEEEEECCCHHHHHHHHHHHHhhcCceEEE-eCC---HHHHhh-CC
Confidence            33443 44578899999999998887665 4466 6777788877777666544    322111 112   223334 99


Q ss_pred             EEEEcCCCCCChHHHHhccccCCeEEEEccCC
Q 018382          247 YIIDTVPANHPLEPYLSLLKLDGKLILTGVIN  278 (357)
Q Consensus       247 ~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~  278 (357)
                      +|+.|+++...+ ...+.++++-.+..+|...
T Consensus       196 iVv~aTps~~P~-~~~~~l~~g~hV~~iGs~~  226 (326)
T PRK06046        196 ILVTTTPSRKPV-VKAEWIKEGTHINAIGADA  226 (326)
T ss_pred             EEEEecCCCCcE-ecHHHcCCCCEEEecCCCC
Confidence            999998876333 2234678888888888654

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=94.97  E-value=0.23  Score=43.09  Aligned_cols=75  Identities=20%  Similarity=0.218  Sum_probs=48.6

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHH-HHHHHH---hcCCc-EE--EcCCChhHHHH----hh---CC
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKK-RVEAME---HLGAD-QY--LVSSDATRMQE----AA---DS  244 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~-~~~~~~---~~g~~-~v--v~~~~~~~~~~----~~---~~  244 (357)
                      .++++||+|+ |.+|..++..+...|++|+++.++..+ .+...+   ..+.. ..  .|..+.+.+.+    +.   .+
T Consensus         4 ~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   83 (248)
T PRK05557          4 EGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFGG   83 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4578999987 999999999999889999887776543 222211   12322 12  25555443332    22   36


Q ss_pred             ccEEEEcCCC
Q 018382          245 LDYIIDTVPA  254 (357)
Q Consensus       245 ~d~v~d~~g~  254 (357)
                      +|+++.++|.
T Consensus        84 id~vi~~ag~   93 (248)
T PRK05557         84 VDILVNNAGI   93 (248)
T ss_pred             CCEEEECCCc
Confidence            8999998875

>PLN02823 spermine synthase

Probab=94.93  E-value=0.22  Score=45.90  Aligned_cols=94  Identities=14%  Similarity=0.161  Sum_probs=59.2

Q ss_pred             CCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCc---------EEEcCCChhHHHHhhCCccEEE
Q 018382          180 SGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGAD---------QYLVSSDATRMQEAADSLDYII  249 (357)
Q Consensus       180 ~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~---------~vv~~~~~~~~~~~~~~~d~v~  249 (357)
                      ..++|||+|+|. |..+..+++..+. +|+++.-+++-.+.+++.++..         +++..+.-.++++..+.+|+||
T Consensus       103 ~pk~VLiiGgG~-G~~~re~l~~~~~~~v~~VEiD~~vv~lar~~~~~~~~~~~dprv~v~~~Da~~~L~~~~~~yDvIi  181 (336)
T PLN02823        103 NPKTVFIMGGGE-GSTAREVLRHKTVEKVVMCDIDQEVVDFCRKHLTVNREAFCDKRLELIINDARAELEKRDEKFDVII  181 (336)
T ss_pred             CCCEEEEECCCc-hHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhcccccccccCCceEEEEChhHHHHhhCCCCccEEE
Confidence            346899998753 4555677776665 8999998888788887766521         1222222234544445899996


Q ss_pred             EcCCCC------------CChH-HHHhccccCCeEEEE
Q 018382          250 DTVPAN------------HPLE-PYLSLLKLDGKLILT  274 (357)
Q Consensus       250 d~~g~~------------~~~~-~~~~~l~~~G~~v~~  274 (357)
                      -=+..+            +.++ .+.+.|+++|.++.-
T Consensus       182 ~D~~dp~~~~~~~~Lyt~eF~~~~~~~~L~p~Gvlv~q  219 (336)
T PLN02823        182 GDLADPVEGGPCYQLYTKSFYERIVKPKLNPGGIFVTQ  219 (336)
T ss_pred             ecCCCccccCcchhhccHHHHHHHHHHhcCCCcEEEEe
Confidence            322111            1234 677889999998754

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=94.91  E-value=0.06  Score=41.66  Aligned_cols=91  Identities=21%  Similarity=0.164  Sum_probs=53.4

Q ss_pred             eEEEEec-ChHHHHHHHHHHHc-CCeEEEEeCCcH-HHHHHHHhcC----C-cEEEcCCChhHHHHhhCCccEEEEcCCC
Q 018382          183 RGGILGL-GGVGHMGVLIAKAM-GHHVTVISSSDK-KRVEAMEHLG----A-DQYLVSSDATRMQEAADSLDYIIDTVPA  254 (357)
Q Consensus       183 ~VlI~G~-g~~G~~ai~la~~~-g~~V~~~~~~~~-~~~~~~~~~g----~-~~vv~~~~~~~~~~~~~~~d~v~d~~g~  254 (357)
                      +|.|+|+ |.+|..+++++... .++++.+..++. .-..+...++    . +..+...+.+    .....|+||.|++.
T Consensus         1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~Dvvf~a~~~   76 (121)
T PF01118_consen    1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVEDADPE----ELSDVDVVFLALPH   76 (121)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEETSGH----HHTTESEEEE-SCH
T ss_pred             CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEeecchh----HhhcCCEEEecCch
Confidence            5889996 99999999999875 346555444433 2222333232    1 2222221111    22689999999998


Q ss_pred             CCChHHHHhccccCCeEEEEccC
Q 018382          255 NHPLEPYLSLLKLDGKLILTGVI  277 (357)
Q Consensus       255 ~~~~~~~~~~l~~~G~~v~~g~~  277 (357)
                      ....+..-+.++.+-++++.+..
T Consensus        77 ~~~~~~~~~~~~~g~~ViD~s~~   99 (121)
T PF01118_consen   77 GASKELAPKLLKAGIKVIDLSGD   99 (121)
T ss_dssp             HHHHHHHHHHHHTTSEEEESSST
T ss_pred             hHHHHHHHHHhhCCcEEEeCCHH
Confidence            73444455555666678777553

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>PLN00198 anthocyanidin reductase; Provisional

Probab=94.91  E-value=0.15  Score=47.11  Aligned_cols=75  Identities=11%  Similarity=0.131  Sum_probs=51.1

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHH--Hhc---CCcEE--EcCCChhHHHHhhCCccEEEEc
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAM--EHL---GADQY--LVSSDATRMQEAADSLDYIIDT  251 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~--~~~---g~~~v--v~~~~~~~~~~~~~~~d~v~d~  251 (357)
                      .+.+|||+|+ |.+|..++..+...|.+|++++++........  ..+   +.-.+  .|..+.+.+.+...++|+||.+
T Consensus         8 ~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~   87 (338)
T PLN00198          8 GKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAPIAGCDLVFHV   87 (338)
T ss_pred             CCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHHhcCCEEEEe
Confidence            4678999986 99999999999888999988887654332211  112   21122  2555555566666689999998


Q ss_pred             CCC
Q 018382          252 VPA  254 (357)
Q Consensus       252 ~g~  254 (357)
                      ++.
T Consensus        88 A~~   90 (338)
T PLN00198         88 ATP   90 (338)
T ss_pred             CCC
Confidence            863

>PRK07578 short chain dehydrogenase; Provisional

Probab=94.90  E-value=0.26  Score=41.47  Aligned_cols=60  Identities=17%  Similarity=0.220  Sum_probs=42.0

Q ss_pred             eEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhh---CCccEEEEcCCC
Q 018382          183 RGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAA---DSLDYIIDTVPA  254 (357)
Q Consensus       183 ~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~---~~~d~v~d~~g~  254 (357)
                      ++||+|+ |++|.+++..+... .+|+++.++..           ....|..+.+.+++..   +++|+++.++|.
T Consensus         2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~-----------~~~~D~~~~~~~~~~~~~~~~id~lv~~ag~   65 (199)
T PRK07578          2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSG-----------DVQVDITDPASIRALFEKVGKVDAVVSAAGK   65 (199)
T ss_pred             eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC-----------ceEecCCChHHHHHHHHhcCCCCEEEECCCC
Confidence            6899987 99999888877666 89999887643           1234555554444432   378999988875

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=94.90  E-value=0.16  Score=46.16  Aligned_cols=75  Identities=20%  Similarity=0.254  Sum_probs=48.8

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcH-HHHHHHH---hcCCcE---EEcCCChhHHHHh------hCCc
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDK-KRVEAME---HLGADQ---YLVSSDATRMQEA------ADSL  245 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~-~~~~~~~---~~g~~~---vv~~~~~~~~~~~------~~~~  245 (357)
                      .++++||+|+ +++|.+.++.+...|++|++.++... +.+.+.+   ..|...   ..|..+.+.+.++      .+.+
T Consensus        11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g~i   90 (306)
T PRK07792         11 SGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGLGGL   90 (306)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhCCC
Confidence            5688999987 99999999888888999999876432 3222222   134222   2344444333322      2479


Q ss_pred             cEEEEcCCC
Q 018382          246 DYIIDTVPA  254 (357)
Q Consensus       246 d~v~d~~g~  254 (357)
                      |++|+++|.
T Consensus        91 D~li~nAG~   99 (306)
T PRK07792         91 DIVVNNAGI   99 (306)
T ss_pred             CEEEECCCC
Confidence            999999875

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=94.86  E-value=0.15  Score=46.19  Aligned_cols=74  Identities=19%  Similarity=0.154  Sum_probs=55.9

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHH---HHHHHhcC-Cc---E--EEcCCChhHHHHhhCCccEEE
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKR---VEAMEHLG-AD---Q--YLVSSDATRMQEAADSLDYII  249 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~---~~~~~~~g-~~---~--vv~~~~~~~~~~~~~~~d~v~  249 (357)
                      .+..|+|+|+ |-+|...+..+...|++|.+++|+.+..   +.+++ +. +.   .  .-|..+.+.+.....|.|.||
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~-l~~a~~~l~l~~aDL~d~~sf~~ai~gcdgVf   83 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRK-LEGAKERLKLFKADLLDEGSFDKAIDGCDGVF   83 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHh-cccCcccceEEeccccccchHHHHHhCCCEEE
Confidence            5688999998 9999999999999999999999988763   23444 54 22   1  224455666777777999999


Q ss_pred             EcCCC
Q 018382          250 DTVPA  254 (357)
Q Consensus       250 d~~g~  254 (357)
                      -++..
T Consensus        84 H~Asp   88 (327)
T KOG1502|consen   84 HTASP   88 (327)
T ss_pred             EeCcc
Confidence            87654

>PRK07201 short chain dehydrogenase; Provisional

Probab=94.86  E-value=0.14  Score=51.82  Aligned_cols=74  Identities=16%  Similarity=0.282  Sum_probs=52.8

Q ss_pred             CCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc---CCc---EEEcCCChhHHHHh-------hCCcc
Q 018382          181 GLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL---GAD---QYLVSSDATRMQEA-------ADSLD  246 (357)
Q Consensus       181 ~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~---g~~---~vv~~~~~~~~~~~-------~~~~d  246 (357)
                      ++++||+|+ |++|..++..+...|++|+++++++++.+.+.+.+   +..   ...|..+.+.+++.       .+.+|
T Consensus       371 ~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id  450 (657)
T PRK07201        371 GKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHGHVD  450 (657)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCCCC
Confidence            678999987 99999999988888999999999887765554322   322   12355554433332       13699


Q ss_pred             EEEEcCCC
Q 018382          247 YIIDTVPA  254 (357)
Q Consensus       247 ~v~d~~g~  254 (357)
                      ++++++|.
T Consensus       451 ~li~~Ag~  458 (657)
T PRK07201        451 YLVNNAGR  458 (657)
T ss_pred             EEEECCCC
Confidence            99999984

>PRK00536 speE spermidine synthase; Provisional

Probab=94.84  E-value=0.067  Score=47.25  Aligned_cols=93  Identities=17%  Similarity=0.122  Sum_probs=60.4

Q ss_pred             CCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCCh-----hHHHHhh-CCccEEE-EcC
Q 018382          180 SGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDA-----TRMQEAA-DSLDYII-DTV  252 (357)
Q Consensus       180 ~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~-----~~~~~~~-~~~d~v~-d~~  252 (357)
                      .-++|||+|+|- |.++-.++|+-. +|+.+.-.++-.+..++.++.-+- ..+++     .++.+.. +.+|+|| |+.
T Consensus        72 ~pk~VLIiGGGD-Gg~~REvLkh~~-~v~mVeID~~Vv~~~k~~lP~~~~-~~~DpRv~l~~~~~~~~~~~fDVIIvDs~  148 (262)
T PRK00536         72 ELKEVLIVDGFD-LELAHQLFKYDT-HVDFVQADEKILDSFISFFPHFHE-VKNNKNFTHAKQLLDLDIKKYDLIICLQE  148 (262)
T ss_pred             CCCeEEEEcCCc-hHHHHHHHCcCC-eeEEEECCHHHHHHHHHHCHHHHH-hhcCCCEEEeehhhhccCCcCCEEEEcCC
Confidence            348999997643 445668888754 899988877766666664552110 01111     1233322 5799984 656


Q ss_pred             CCCCChHHHHhccccCCeEEEEc
Q 018382          253 PANHPLEPYLSLLKLDGKLILTG  275 (357)
Q Consensus       253 g~~~~~~~~~~~l~~~G~~v~~g  275 (357)
                      -+.+..+.+.++|+++|.++.-+
T Consensus       149 ~~~~fy~~~~~~L~~~Gi~v~Qs  171 (262)
T PRK00536        149 PDIHKIDGLKRMLKEDGVFISVA  171 (262)
T ss_pred             CChHHHHHHHHhcCCCcEEEECC
Confidence            55556778999999999998653

>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional

Probab=94.82  E-value=0.15  Score=51.25  Aligned_cols=74  Identities=15%  Similarity=0.223  Sum_probs=59.9

Q ss_pred             CCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEE-cCCChhHHHHhh-CCccEEEEcCCCC
Q 018382          181 GLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYL-VSSDATRMQEAA-DSLDYIIDTVPAN  255 (357)
Q Consensus       181 ~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv-~~~~~~~~~~~~-~~~d~v~d~~g~~  255 (357)
                      .++|+|.|.|.+|+..++.++..|.++++++.++++.+.+++ +|...++ |..+++.+++.. ..+|.++-+.++.
T Consensus       400 ~~~vII~G~Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~-~g~~v~~GDat~~~~L~~agi~~A~~vvv~~~d~  475 (621)
T PRK03562        400 QPRVIIAGFGRFGQIVGRLLLSSGVKMTVLDHDPDHIETLRK-FGMKVFYGDATRMDLLESAGAAKAEVLINAIDDP  475 (621)
T ss_pred             cCcEEEEecChHHHHHHHHHHhCCCCEEEEECCHHHHHHHHh-cCCeEEEEeCCCHHHHHhcCCCcCCEEEEEeCCH
Confidence            367999999999999999999999999999999999988877 7865432 455566666544 3799999888875

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=94.81  E-value=0.15  Score=40.21  Aligned_cols=92  Identities=20%  Similarity=0.140  Sum_probs=54.1

Q ss_pred             CCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCc-------------------HHHH----HHHHhcCCcEEEcC--C-
Q 018382          181 GLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSD-------------------KKRV----EAMEHLGADQYLVS--S-  233 (357)
Q Consensus       181 ~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~-------------------~~~~----~~~~~~g~~~vv~~--~-  233 (357)
                      ..+|+|+|+|++|..++..+-..|+ ++++++...                   .|.+    .+.+..+..++...  . 
T Consensus         2 ~~~v~iiG~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~~   81 (135)
T PF00899_consen    2 NKRVLIIGAGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEKI   81 (135)
T ss_dssp             T-EEEEESTSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESHC
T ss_pred             CCEEEEECcCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeeccc
Confidence            4689999999999999999988899 777776322                   1222    22221222222111  1 


Q ss_pred             ChhHHHHhhCCccEEEEcCCCCCChHHHHhccccCCeEE
Q 018382          234 DATRMQEAADSLDYIIDTVPANHPLEPYLSLLKLDGKLI  272 (357)
Q Consensus       234 ~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v  272 (357)
                      +.+...+...++|+||+|..+........+.++..++-+
T Consensus        82 ~~~~~~~~~~~~d~vi~~~d~~~~~~~l~~~~~~~~~p~  120 (135)
T PF00899_consen   82 DEENIEELLKDYDIVIDCVDSLAARLLLNEICREYGIPF  120 (135)
T ss_dssp             SHHHHHHHHHTSSEEEEESSSHHHHHHHHHHHHHTT-EE
T ss_pred             ccccccccccCCCEEEEecCCHHHHHHHHHHHHHcCCCE
Confidence            123344444689999999988633334445555555543

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional

Probab=94.79  E-value=0.086  Score=46.90  Aligned_cols=103  Identities=18%  Similarity=0.182  Sum_probs=63.8

Q ss_pred             hhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHH-Hh-hCCccEEE
Q 018382          172 LSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQ-EA-ADSLDYII  249 (357)
Q Consensus       172 l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~-~~-~~~~d~v~  249 (357)
                      +.... +.++.+||=+|+|. |..+..+++..+++|+.++.+++..+.+++......-+.....+... .. .+.||+|+
T Consensus        45 l~~l~-l~~~~~VLDiGcG~-G~~a~~la~~~~~~v~giD~s~~~~~~a~~~~~~~~~i~~~~~D~~~~~~~~~~FD~V~  122 (263)
T PTZ00098         45 LSDIE-LNENSKVLDIGSGL-GGGCKYINEKYGAHVHGVDICEKMVNIAKLRNSDKNKIEFEANDILKKDFPENTFDMIY  122 (263)
T ss_pred             HHhCC-CCCCCEEEEEcCCC-ChhhHHHHhhcCCEEEEEECCHHHHHHHHHHcCcCCceEEEECCcccCCCCCCCeEEEE
Confidence            33443 38899999998753 45566677777889999999988877777644421111111111111 11 23699998


Q ss_pred             Ec--C---C--C-CCChHHHHhccccCCeEEEEcc
Q 018382          250 DT--V---P--A-NHPLEPYLSLLKLDGKLILTGV  276 (357)
Q Consensus       250 d~--~---g--~-~~~~~~~~~~l~~~G~~v~~g~  276 (357)
                      ..  .   +  . ...++.+.+.|+|+|+++....
T Consensus       123 s~~~l~h~~~~d~~~~l~~i~r~LkPGG~lvi~d~  157 (263)
T PTZ00098        123 SRDAILHLSYADKKKLFEKCYKWLKPNGILLITDY  157 (263)
T ss_pred             EhhhHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence            52  1   1  1 1245677899999999987654

>PLN00015 protochlorophyllide reductase

Probab=94.77  E-value=0.13  Score=46.78  Aligned_cols=70  Identities=19%  Similarity=0.185  Sum_probs=49.2

Q ss_pred             EEEec-ChHHHHHHHHHHHcC-CeEEEEeCCcHHHHHHHHhcCC---c---EEEcCCChhHHHHh----h---CCccEEE
Q 018382          185 GILGL-GGVGHMGVLIAKAMG-HHVTVISSSDKKRVEAMEHLGA---D---QYLVSSDATRMQEA----A---DSLDYII  249 (357)
Q Consensus       185 lI~G~-g~~G~~ai~la~~~g-~~V~~~~~~~~~~~~~~~~~g~---~---~vv~~~~~~~~~~~----~---~~~d~v~  249 (357)
                      ||+|+ +++|.++++.+...| ++|+++++++++.+.+.+.++.   .   ..+|..+.+.++++    .   +++|+++
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lI   80 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLV   80 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence            57887 999999888888889 8999999988776655554431   1   12466565443332    2   3689999


Q ss_pred             EcCCC
Q 018382          250 DTVPA  254 (357)
Q Consensus       250 d~~g~  254 (357)
                      +++|.
T Consensus        81 nnAG~   85 (308)
T PLN00015         81 CNAAV   85 (308)
T ss_pred             ECCCc
Confidence            98874

>smart00846 Gp_dh_N Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain

Probab=94.72  E-value=0.39  Score=38.64  Aligned_cols=96  Identities=15%  Similarity=0.183  Sum_probs=57.2

Q ss_pred             eEEEEecChHHHHHHHHHHH-cCCeEEEEeC--CcHHHHHHHH---hcC---CcE-------EEc--------CCChhHH
Q 018382          183 RGGILGLGGVGHMGVLIAKA-MGHHVTVISS--SDKKRVEAME---HLG---ADQ-------YLV--------SSDATRM  238 (357)
Q Consensus       183 ~VlI~G~g~~G~~ai~la~~-~g~~V~~~~~--~~~~~~~~~~---~~g---~~~-------vv~--------~~~~~~~  238 (357)
                      +|.|+|.|.+|...++.+.. .+.+++++..  +.+....+.+   -.|   .+.       +++        .+++..+
T Consensus         2 kv~I~G~GriGr~v~~~~~~~~~~~lvai~d~~~~~~~a~ll~~Ds~hg~~~~~v~~~~~~l~i~g~~i~~~~~~~p~~~   81 (149)
T smart00846        2 KVGINGFGRIGRLVLRALLERPDIEVVAINDLTDPETLAHLLKYDSVHGRFPGEVEVDEDGLIVNGKKIKVLAERDPANL   81 (149)
T ss_pred             EEEEECcCHHHHHHHHHHHhCCCCEEEEeecCCCHHHHHHHhcccCCCCCCCCcEEEeCCEEEECCEEEEEEecCChHHC
Confidence            57889999999998888774 4567776554  2233333333   122   110       111        1222222


Q ss_pred             HHhhCCccEEEEcCCCCCChHHHHhccccCCeEEEEccCC
Q 018382          239 QEAADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVIN  278 (357)
Q Consensus       239 ~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~  278 (357)
                      .+...++|+|+||+|.....+.+...+..+-+-|.++.+.
T Consensus        82 ~w~~~gvDiVie~tG~f~~~~~~~~hl~~GakkViisap~  121 (149)
T smart00846       82 PWKELGVDIVVECTGKFTTREKASAHLKAGAKKVIISAPA  121 (149)
T ss_pred             cccccCCeEEEeccccccchHHHHHHHHcCCCEEEeCCCC
Confidence            2223479999999988645556667788776777776654

GAPDH is a tetrameric NAD-binding enzyme involved in glycolysis and glyconeogenesis. N-terminal domain is a Rossmann NAD(P) binding fold.

>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=94.70  E-value=0.53  Score=40.47  Aligned_cols=37  Identities=30%  Similarity=0.332  Sum_probs=31.0

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcH
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDK  215 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~  215 (357)
                      -.|.+|+|.|.|.+|..+++++...|++|+.++.+..
T Consensus        21 l~g~~vaIqGfGnVG~~~a~~L~~~G~~vV~vsD~~g   57 (217)
T cd05211          21 LEGLTVAVQGLGNVGWGLAKKLAEEGGKVLAVSDPDG   57 (217)
T ss_pred             cCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEcCCC
Confidence            3688999999999999999999999997666655444

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral

>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]

Probab=94.69  E-value=0.24  Score=42.72  Aligned_cols=99  Identities=16%  Similarity=0.207  Sum_probs=57.8

Q ss_pred             CCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCc------HH-HHHHHHhcCC----------------cEEE---cC
Q 018382          180 SGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSD------KK-RVEAMEHLGA----------------DQYL---VS  232 (357)
Q Consensus       180 ~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~------~~-~~~~~~~~g~----------------~~vv---~~  232 (357)
                      +...|+|+|.|++|.+++..+-..|+ ++.+++..+      .| ...+....|.                -++-   +.
T Consensus        29 ~~~~V~VvGiGGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~~f  108 (263)
T COG1179          29 KQAHVCVVGIGGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAINDF  108 (263)
T ss_pred             hhCcEEEEecCchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehHhh
Confidence            35789999999999999999999998 777765322      11 1111111221                1111   11


Q ss_pred             CChhHHHHhhC-CccEEEEcCCCCCCh-HHHHhccccCCeEEEEccCC
Q 018382          233 SDATRMQEAAD-SLDYIIDTVPANHPL-EPYLSLLKLDGKLILTGVIN  278 (357)
Q Consensus       233 ~~~~~~~~~~~-~~d~v~d~~g~~~~~-~~~~~~l~~~G~~v~~g~~~  278 (357)
                      -.++.++++.. ++|+|+||..+-..- ..+..|.+.+=.++..+...
T Consensus       109 ~t~en~~~~~~~~~DyvIDaiD~v~~Kv~Li~~c~~~ki~vIss~Gag  156 (263)
T COG1179         109 ITEENLEDLLSKGFDYVIDAIDSVRAKVALIAYCRRNKIPVISSMGAG  156 (263)
T ss_pred             hCHhHHHHHhcCCCCEEEEchhhhHHHHHHHHHHHHcCCCEEeecccc
Confidence            12344444443 799999999886332 23334555555666665543

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=94.69  E-value=0.093  Score=47.63  Aligned_cols=93  Identities=19%  Similarity=0.154  Sum_probs=67.9

Q ss_pred             eEEEEec-ChHHHHHHHHHHH----cCCeEEEEeCCcHHHHHHHHhcCCc----------EEEcCCChhHHHHhhCCccE
Q 018382          183 RGGILGL-GGVGHMGVLIAKA----MGHHVTVISSSDKKRVEAMEHLGAD----------QYLVSSDATRMQEAADSLDY  247 (357)
Q Consensus       183 ~VlI~G~-g~~G~~ai~la~~----~g~~V~~~~~~~~~~~~~~~~~g~~----------~vv~~~~~~~~~~~~~~~d~  247 (357)
                      -++|.|| |-+|...+.-+..    -+...-+..|+++|+++..+..+..          .+.|..+++.+.++.....+
T Consensus         7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak~~~v   86 (423)
T KOG2733|consen    7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAKQARV   86 (423)
T ss_pred             eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHhhhEE
Confidence            3678898 8999998888876    4678889999999998887766632          24677788888888889999


Q ss_pred             EEEcCCCCCCh--HHHHhccccCCeEEEEc
Q 018382          248 IIDTVPANHPL--EPYLSLLKLDGKLILTG  275 (357)
Q Consensus       248 v~d~~g~~~~~--~~~~~~l~~~G~~v~~g  275 (357)
                      ++||+|.....  .....|+.+|-..+++.
T Consensus        87 ivN~vGPyR~hGE~VVkacienG~~~vDIS  116 (423)
T KOG2733|consen   87 IVNCVGPYRFHGEPVVKACIENGTHHVDIS  116 (423)
T ss_pred             EEeccccceecCcHHHHHHHHcCCceeccC
Confidence            99999875221  12333444455566554

>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.68  E-value=0.29  Score=43.57  Aligned_cols=97  Identities=16%  Similarity=0.188  Sum_probs=72.2

Q ss_pred             ccccchhhhhhhhhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhH
Q 018382          159 APLLCAGVTVFSPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATR  237 (357)
Q Consensus       159 a~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~  237 (357)
                      +.+||.....+..|+....--.|++|+|+|- ..+|.-++.++...|+.|++..+...                     .
T Consensus       136 ~~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~~VGkPla~lL~~~~AtVt~chs~T~---------------------~  194 (278)
T PRK14172        136 CFLPCTPNSVITLIKSLNIDIEGKEVVVIGRSNIVGKPVAQLLLNENATVTICHSKTK---------------------N  194 (278)
T ss_pred             CCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCC---------------------C
Confidence            3567776666666766655458999999985 88999999999999999888653211                     1


Q ss_pred             HHHhhCCccEEEEcCCCCCChHHHHhccccCCeEEEEccCC
Q 018382          238 MQEAADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVIN  278 (357)
Q Consensus       238 ~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~  278 (357)
                      +++.....|+|+-++|.+..+  -.+.++++-.++++|...
T Consensus       195 l~~~~~~ADIvIsAvGkp~~i--~~~~ik~gavVIDvGin~  233 (278)
T PRK14172        195 LKEVCKKADILVVAIGRPKFI--DEEYVKEGAIVIDVGTSS  233 (278)
T ss_pred             HHHHHhhCCEEEEcCCCcCcc--CHHHcCCCcEEEEeeccc
Confidence            334555689999999998543  346699999999998654

>PRK12921 2-dehydropantoate 2-reductase; Provisional

Probab=94.68  E-value=0.17  Score=45.93  Aligned_cols=89  Identities=25%  Similarity=0.196  Sum_probs=56.5

Q ss_pred             eEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEE-------EcCCChhHHHHhhCCccEEEEcCCCC
Q 018382          183 RGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQY-------LVSSDATRMQEAADSLDYIIDTVPAN  255 (357)
Q Consensus       183 ~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~v-------v~~~~~~~~~~~~~~~d~v~d~~g~~  255 (357)
                      +|+|+|+|.+|.+.+..+...|.+|+.+++ +++.+.+.+ .|....       +.....+...+....+|++|-|+...
T Consensus         2 kI~IiG~G~iG~~~a~~L~~~g~~V~~~~r-~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vilavk~~   79 (305)
T PRK12921          2 RIAVVGAGAVGGTFGGRLLEAGRDVTFLVR-PKRAKALRE-RGLVIRSDHGDAVVPGPVITDPEELTGPFDLVILAVKAY   79 (305)
T ss_pred             eEEEECCCHHHHHHHHHHHHCCCceEEEec-HHHHHHHHh-CCeEEEeCCCeEEecceeecCHHHccCCCCEEEEEeccc
Confidence            588999999999888888877999999998 666666665 553211       10000111122335799999988876


Q ss_pred             CChHHHHhccc----cCCeEEEE
Q 018382          256 HPLEPYLSLLK----LDGKLILT  274 (357)
Q Consensus       256 ~~~~~~~~~l~----~~G~~v~~  274 (357)
                       ..+.+++.++    ++..++.+
T Consensus        80 -~~~~~~~~l~~~~~~~~~ii~~  101 (305)
T PRK12921         80 -QLDAAIPDLKPLVGEDTVIIPL  101 (305)
T ss_pred             -CHHHHHHHHHhhcCCCCEEEEe
Confidence             4555555443    34445444

>COG0027 PurT Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) [Nucleotide transport and metabolism]

Probab=94.67  E-value=0.3  Score=43.58  Aligned_cols=166  Identities=15%  Similarity=0.132  Sum_probs=90.7

Q ss_pred             CCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhC--CccEEEEcCCCCCC
Q 018382          180 SGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAAD--SLDYIIDTVPANHP  257 (357)
Q Consensus       180 ~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~--~~d~v~d~~g~~~~  257 (357)
                      ...+|+.+|+|-+|.-.+--++.+|.+|+++++-+..-  ++.--...+++|.-|.+.++.+..  ..|+++--+-.- .
T Consensus        11 ~a~kvmLLGSGELGKEvaIe~QRLG~eViAVDrY~~AP--AmqVAhrs~Vi~MlD~~al~avv~rekPd~IVpEiEAI-~   87 (394)
T COG0027          11 QATKVMLLGSGELGKEVAIEAQRLGVEVIAVDRYANAP--AMQVAHRSYVIDMLDGDALRAVVEREKPDYIVPEIEAI-A   87 (394)
T ss_pred             CCeEEEEecCCccchHHHHHHHhcCCEEEEecCcCCCh--hhhhhhheeeeeccCHHHHHHHHHhhCCCeeeehhhhh-h
Confidence            34568889999999999999999999999999875542  222122467888888888887754  789887422221 2


Q ss_pred             hHHHHhccccCCeEEEEccCCCC--cccchHHHhhccceEEEEeecCHHHHHHHHHHHHhc----CCCccE--------E
Q 018382          258 LEPYLSLLKLDGKLILTGVINTP--MQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREK----GVTSMI--------E  323 (357)
Q Consensus       258 ~~~~~~~l~~~G~~v~~g~~~~~--~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~----~l~~~i--------~  323 (357)
                      ...+.++=..+..+|-..-...-  ..-.+..+-...+.+-.+...-...++++.+..++-    .++|..        -
T Consensus        88 td~L~elE~~G~~VVP~ArAt~ltMnRegiRrlAAeeLglpTs~Y~fa~s~~e~~~a~~~iGfPcvvKPvMSSSGkGqsv  167 (394)
T COG0027          88 TDALVELEEEGYTVVPNARATKLTMNREGIRRLAAEELGLPTSKYRFADSLEELRAAVEKIGFPCVVKPVMSSSGKGQSV  167 (394)
T ss_pred             HHHHHHHHhCCceEccchHHHHhhhcHHHHHHHHHHHhCCCCccccccccHHHHHHHHHHcCCCeecccccccCCCCcee
Confidence            23344444445555433211100  001111222222222111111112233444434432    222311        1


Q ss_pred             EeecccHHHHHHHHHcCCcc--EEEEE
Q 018382          324 VIKMDYVNKAFERLEKNDVR--YRFVV  348 (357)
Q Consensus       324 ~~~~~~~~~a~~~~~~~~~~--Gkvvi  348 (357)
                      +-+.+++++||++.+++.-.  |||++
T Consensus       168 v~~~e~ve~AW~~A~~g~R~~~~RVIV  194 (394)
T COG0027         168 VRSPEDVEKAWEYAQQGGRGGSGRVIV  194 (394)
T ss_pred             ecCHHHHHHHHHHHHhcCCCCCCcEEE
Confidence            33578999999988755433  57765

>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []

Probab=94.67  E-value=0.7  Score=36.07  Aligned_cols=89  Identities=18%  Similarity=0.320  Sum_probs=54.7

Q ss_pred             EEEEec-ChHHHHHHHHHHHcC--CeEEEEeC--CcHHHHHHHHhcCCcEEEcCCChh--HHH-----------------
Q 018382          184 GGILGL-GGVGHMGVLIAKAMG--HHVTVISS--SDKKRVEAMEHLGADQYLVSSDAT--RMQ-----------------  239 (357)
Q Consensus       184 VlI~G~-g~~G~~ai~la~~~g--~~V~~~~~--~~~~~~~~~~~~g~~~vv~~~~~~--~~~-----------------  239 (357)
                      |.|+|+ |.+|..++++++...  .+|+..+.  +-+++....++|....++-.+...  .++                 
T Consensus         1 i~ILGsTGSIG~qtLdVi~~~~d~f~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~~~~~~~l~~~~~~~~~~~~v~~G~~   80 (129)
T PF02670_consen    1 IAILGSTGSIGTQTLDVIRKHPDKFEVVALSAGSNIEKLAEQAREFKPKYVVIADEEAYEELKKALPSKGPGIEVLSGPE   80 (129)
T ss_dssp             EEEESTTSHHHHHHHHHHHHCTTTEEEEEEEESSTHHHHHHHHHHHT-SEEEESSHHHHHHHHHHHHHTTSSSEEEESHH
T ss_pred             CEEEcCCcHHHHHHHHHHHhCCCceEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHHhhhcCCCCEEEeChH
Confidence            578898 999999999999887  57776653  333444444448877766544321  111                 


Q ss_pred             ---Hhh--CCccEEEEcCCCCCChHHHHhccccCCeEE
Q 018382          240 ---EAA--DSLDYIIDTVPANHPLEPYLSLLKLDGKLI  272 (357)
Q Consensus       240 ---~~~--~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v  272 (357)
                         ++.  ..+|+|+....+...+.-.+..++.+=++.
T Consensus        81 ~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~gk~ia  118 (129)
T PF02670_consen   81 GLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKAGKDIA  118 (129)
T ss_dssp             HHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHTTSEEE
T ss_pred             HHHHHhcCCCCCEEEEeCcccchHHHHHHHHHCCCeEE
Confidence               111  268888887776656777777777664443

In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....

>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.65  E-value=0.25  Score=44.02  Aligned_cols=96  Identities=17%  Similarity=0.229  Sum_probs=72.2

Q ss_pred             ccccchhhhhhhhhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhH
Q 018382          159 APLLCAGVTVFSPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATR  237 (357)
Q Consensus       159 a~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~  237 (357)
                      +.+||.....+..|+..+.--.|++|+|+|- ..+|.-++.++...|+.|++..+...                     .
T Consensus       137 ~~~PcTp~avi~ll~~y~i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVt~chs~T~---------------------~  195 (284)
T PRK14177        137 TYLPCTPYGMVLLLKEYGIDVTGKNAVVVGRSPILGKPMAMLLTEMNATVTLCHSKTQ---------------------N  195 (284)
T ss_pred             CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCC---------------------C
Confidence            4567766666666666655458999999996 89999999999999999988653211                     1


Q ss_pred             HHHhhCCccEEEEcCCCCCChHHHHhccccCCeEEEEccC
Q 018382          238 MQEAADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVI  277 (357)
Q Consensus       238 ~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~  277 (357)
                      +++.....|+++-++|.+..+  -.+.++++-.++++|..
T Consensus       196 l~~~~~~ADIvIsAvGk~~~i--~~~~ik~gavVIDvGin  233 (284)
T PRK14177        196 LPSIVRQADIIVGAVGKPEFI--KADWISEGAVLLDAGYN  233 (284)
T ss_pred             HHHHHhhCCEEEEeCCCcCcc--CHHHcCCCCEEEEecCc
Confidence            334456789999999998443  36789999999999874

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=94.65  E-value=0.21  Score=41.41  Aligned_cols=32  Identities=22%  Similarity=0.396  Sum_probs=27.4

Q ss_pred             eEEEEecChHHHHHHHHHHHcCC-eEEEEeCCc
Q 018382          183 RGGILGLGGVGHMGVLIAKAMGH-HVTVISSSD  214 (357)
Q Consensus       183 ~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~  214 (357)
                      +|+|+|+|++|...++.+...|. ++++++...
T Consensus         1 ~VlViG~GglGs~ia~~La~~Gvg~i~lvD~D~   33 (174)
T cd01487           1 KVGIAGAGGLGSNIAVLLARSGVGNLKLVDFDV   33 (174)
T ss_pred             CEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            48999999999999999988999 688887654

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>TIGR00438 rrmJ cell division protein FtsJ

Probab=94.65  E-value=0.26  Score=41.32  Aligned_cols=96  Identities=19%  Similarity=0.177  Sum_probs=56.0

Q ss_pred             cCCCCCCCeEEEEecChHHHHHHHHHHHcC-CeEEEEeCCcHHHHHHHHhcCCcEE-EcCCChhHHHH----hh-CCccE
Q 018382          175 FGLKQSGLRGGILGLGGVGHMGVLIAKAMG-HHVTVISSSDKKRVEAMEHLGADQY-LVSSDATRMQE----AA-DSLDY  247 (357)
Q Consensus       175 ~~~~~~~~~VlI~G~g~~G~~ai~la~~~g-~~V~~~~~~~~~~~~~~~~~g~~~v-v~~~~~~~~~~----~~-~~~d~  247 (357)
                      ...++++++||.+|+|.-++......+..+ .+|++++.++..     ...+...+ .|..+......    .. +++|+
T Consensus        27 ~~~i~~g~~VLDiG~GtG~~~~~l~~~~~~~~~v~~vDis~~~-----~~~~i~~~~~d~~~~~~~~~l~~~~~~~~~D~  101 (188)
T TIGR00438        27 FKLIKPGDTVLDLGAAPGGWSQVAVEQVGGKGRVIAVDLQPMK-----PIENVDFIRGDFTDEEVLNKIRERVGDDKVDV  101 (188)
T ss_pred             hcccCCCCEEEEecCCCCHHHHHHHHHhCCCceEEEEeccccc-----cCCCceEEEeeCCChhHHHHHHHHhCCCCccE
Confidence            444588999999998765543333333323 489999988654     11233322 23333222222    22 36999


Q ss_pred             EEE-cC----CC------------CCChHHHHhccccCCeEEEEc
Q 018382          248 IID-TV----PA------------NHPLEPYLSLLKLDGKLILTG  275 (357)
Q Consensus       248 v~d-~~----g~------------~~~~~~~~~~l~~~G~~v~~g  275 (357)
                      |+. ..    |.            ...++.+.+.|+++|+++...
T Consensus       102 V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lvi~~  146 (188)
T TIGR00438       102 VMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPKGNFVVKV  146 (188)
T ss_pred             EEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCCCEEEEEE
Confidence            995 22    21            124566788999999998754

>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase

Probab=94.65  E-value=0.23  Score=41.58  Aligned_cols=113  Identities=18%  Similarity=0.169  Sum_probs=75.5

Q ss_pred             ccccchhhhhhhhhhccCC---------CCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcE
Q 018382          159 APLLCAGVTVFSPLSHFGL---------KQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQ  228 (357)
Q Consensus       159 a~~~~~~~ta~~~l~~~~~---------~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~  228 (357)
                      +.+||.....+..|+..+.         --.|++|+|+|- ..+|.=++.++...|+.|++...+.-..  ..+ .+.  
T Consensus        31 ~~~PCTp~avi~lL~~~~i~~~~~~~~~~l~GK~vvVIGrS~iVGkPla~lL~~~~AtVti~~~~~~~~--~~~-~~~--  105 (197)
T cd01079          31 SILPCTPLAIVKILEFLGIYNKILPYGNRLYGKTITIINRSEVVGRPLAALLANDGARVYSVDINGIQV--FTR-GES--  105 (197)
T ss_pred             CccCCCHHHHHHHHHHhCCcccccccCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEEecCcccc--ccc-ccc--
Confidence            4567766666666665532         257999999986 7899999999999999999875431111  111 110  


Q ss_pred             EEcCC-----C-hhHHHHhhCCccEEEEcCCCCCChHHHHhccccCCeEEEEccCC
Q 018382          229 YLVSS-----D-ATRMQEAADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVIN  278 (357)
Q Consensus       229 vv~~~-----~-~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~  278 (357)
                       ..++     + +..+.+....+|+|+-++|.+. +..-.+.++++-.++++|...
T Consensus       106 -~~hs~t~~~~~~~~l~~~~~~ADIVIsAvG~~~-~~i~~d~ik~GavVIDVGi~~  159 (197)
T cd01079         106 -IRHEKHHVTDEEAMTLDCLSQSDVVITGVPSPN-YKVPTELLKDGAICINFASIK  159 (197)
T ss_pred             -cccccccccchhhHHHHHhhhCCEEEEccCCCC-CccCHHHcCCCcEEEEcCCCc
Confidence             0111     1 1124566678999999999984 323467899999999998653

The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional

>PRK08410 2-hydroxyacid dehydrogenase; Provisional

Probab=94.64  E-value=0.2  Score=45.69  Aligned_cols=84  Identities=32%  Similarity=0.410  Sum_probs=58.2

Q ss_pred             CCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCC----
Q 018382          180 SGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPAN----  255 (357)
Q Consensus       180 ~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~----  255 (357)
                      .|++|.|+|.|.+|...+++++.+|++|+...++....    + .+...       ..++++....|+|.-++.-.    
T Consensus       144 ~gktvGIiG~G~IG~~vA~~~~~fgm~V~~~d~~~~~~----~-~~~~~-------~~l~ell~~sDvv~lh~Plt~~T~  211 (311)
T PRK08410        144 KGKKWGIIGLGTIGKRVAKIAQAFGAKVVYYSTSGKNK----N-EEYER-------VSLEELLKTSDIISIHAPLNEKTK  211 (311)
T ss_pred             CCCEEEEECCCHHHHHHHHHHhhcCCEEEEECCCcccc----c-cCcee-------ecHHHHhhcCCEEEEeCCCCchhh
Confidence            68899999999999999999999999999988753211    1 12111       12445555678887665432    


Q ss_pred             CCh-HHHHhccccCCeEEEEc
Q 018382          256 HPL-EPYLSLLKLDGKLILTG  275 (357)
Q Consensus       256 ~~~-~~~~~~l~~~G~~v~~g  275 (357)
                      ..+ ...++.|+++..++.++
T Consensus       212 ~li~~~~~~~Mk~~a~lIN~a  232 (311)
T PRK08410        212 NLIAYKELKLLKDGAILINVG  232 (311)
T ss_pred             cccCHHHHHhCCCCeEEEECC
Confidence            122 35778888888887763

>PRK06436 glycerate dehydrogenase; Provisional

Probab=94.63  E-value=0.17  Score=45.98  Aligned_cols=84  Identities=24%  Similarity=0.359  Sum_probs=58.9

Q ss_pred             CCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCC---
Q 018382          180 SGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANH---  256 (357)
Q Consensus       180 ~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~---  256 (357)
                      .|++|.|+|.|.+|..++++++.+|++|++..++...       .+.....     ..++++....|+|+.+.....   
T Consensus       121 ~gktvgIiG~G~IG~~vA~~l~afG~~V~~~~r~~~~-------~~~~~~~-----~~l~ell~~aDiv~~~lp~t~~T~  188 (303)
T PRK06436        121 YNKSLGILGYGGIGRRVALLAKAFGMNIYAYTRSYVN-------DGISSIY-----MEPEDIMKKSDFVLISLPLTDETR  188 (303)
T ss_pred             CCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcc-------cCccccc-----CCHHHHHhhCCEEEECCCCCchhh
Confidence            5899999999999999999999999999999876321       1222111     123445557888888776532   


Q ss_pred             -Ch-HHHHhccccCCeEEEEc
Q 018382          257 -PL-EPYLSLLKLDGKLILTG  275 (357)
Q Consensus       257 -~~-~~~~~~l~~~G~~v~~g  275 (357)
                       .+ ...++.|+++..++.++
T Consensus       189 ~li~~~~l~~mk~ga~lIN~s  209 (303)
T PRK06436        189 GMINSKMLSLFRKGLAIINVA  209 (303)
T ss_pred             cCcCHHHHhcCCCCeEEEECC
Confidence             11 34677888887777764

>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.63  E-value=0.34  Score=43.25  Aligned_cols=97  Identities=20%  Similarity=0.190  Sum_probs=72.6

Q ss_pred             ccccchhhhhhhhhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhH
Q 018382          159 APLLCAGVTVFSPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATR  237 (357)
Q Consensus       159 a~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~  237 (357)
                      ..+||........|+..+.--.|++|+|+|- ..+|.-++.++...|+.|++..+..                     ..
T Consensus       136 ~~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~atVt~chs~t---------------------~~  194 (284)
T PRK14190        136 TFLPCTPHGILELLKEYNIDISGKHVVVVGRSNIVGKPVGQLLLNENATVTYCHSKT---------------------KN  194 (284)
T ss_pred             CCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEeCCc---------------------hh
Confidence            3567776667777777665468999999996 8999999999999999999864321                     12


Q ss_pred             HHHhhCCccEEEEcCCCCCChHHHHhccccCCeEEEEccCC
Q 018382          238 MQEAADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVIN  278 (357)
Q Consensus       238 ~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~  278 (357)
                      +++.....|+|+-++|.+..+  -.+.++++..++++|...
T Consensus       195 l~~~~~~ADIvI~AvG~p~~i--~~~~ik~gavVIDvGi~~  233 (284)
T PRK14190        195 LAELTKQADILIVAVGKPKLI--TADMVKEGAVVIDVGVNR  233 (284)
T ss_pred             HHHHHHhCCEEEEecCCCCcC--CHHHcCCCCEEEEeeccc
Confidence            334455789999999988443  356788999999998753

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	357
2cf5_A	357	Crystal Structures Of The Arabidopsis Cinnamyl Alco		1e-131
1yqd_A	366	Sinapyl Alcohol Dehydrogenase Complexed With Nadp+		7e-80
1uuf_A	369	Crystal Structure Of A Zinc-Type Alcohol Dehydrogen		8e-50
3two_A	348	The Crystal Structure Of Cad From Helicobacter Pylo		1e-38
1ps0_A	360	Crystal Structure Of The Nadp(H)-Dependent Cinnamyl		5e-30
1rjw_A	339	Crystal Structure Of Nad(+)-Dependent Alcohol Dehyd		1e-20
3pii_A	339	Crystal Structure Of Mutant Of Ht- Alcohol Dehydrog		1e-20
3s1l_A	340	Crystal Structure Of Apo-Form Furx Length = 340		1e-16
4eez_A	348	Crystal Structure Of Lactococcus Lactis Alcohol Deh		5e-16
4eex_A	348	Crystal Structure Of Lactococcus Lactis Alcohol Deh		2e-15
2hcy_A	347	Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevi		4e-15
3meq_A	365	Crystal Structure Of Alcohol Dehydrogenase From Bru		8e-15
1llu_A	342	The Ternary Complex Of Pseudomonas Aeruginosa Alcoh		1e-14
1r37_A	347	Alcohol Dehydrogenase From Sulfolobus Solfataricus		3e-09
3i4c_A	347	Crystal Structure Of Sulfolobus Solfataricus Adh(Ss		4e-09
1nto_A	347	N249y Mutant Of Alcohol Dehydrogenase From The Arch		4e-09
2eer_A	347	Structural Study Of Project Id St2577 From Sulfolob		1e-08
1jvb_A	347	Alcohol Dehydrogenase From The Archaeon Sulfolobus		1e-07
1h2b_A	359	Crystal Structure Of The Alcohol Dehydrogenase From		1e-07
2xaa_A	345	Alcohol Dehydrogenase Adh-'a' From Rhodococcus Rube		3e-05
2h6e_A	344	Crystal Structure Of The D-Arabinose Dehydrogenase		7e-05

>pdb|2CF5|A Chain A, Crystal Structures Of The Arabidopsis Cinnamyl Alcohol Dehydrogenases, Atcad5 Length = 357

Iteration: 1
 Score =  464 bits (1195), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 228/356 (64%), Positives = 260/356 (73%)
Query: 1   MGSLDTERATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGM 60
           MG ++ ER T GWAA+DPSGILSPYTYTLR TG EDV I+++ CGICHTD+HQ KNDLGM
Sbjct: 1   MGIMEAERKTTGWAARDPSGILSPYTYTLRETGPEDVNIRIICCGICHTDLHQTKNDLGM 60
Query: 61  SNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNCRPCEADVEQYCNKKIWS 120
           SNYPM                 S F             CC  C PCE D+EQYC KKIWS
Sbjct: 61  SNYPMVPGHEVVGEVVEVGSDVSKFTVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWS 120
Query: 121 YNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQS 180
           YNDVY +G+PTQGGFA++ VV QKFVVKIP+GMA+EQAAPLLCAGVTV+SPLSHFGLKQ 
Sbjct: 121 YNDVYINGQPTQGGFAKATVVHQKFVVKIPEGMAVEQAAPLLCAGVTVYSPLSHFGLKQP 180
Query: 181 XXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQE 240
                              AKAMGHHVTVISSS+KKR EA++ LGAD Y++ SD  +M E
Sbjct: 181 GLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYVIGSDQAKMSE 240
Query: 241 AADSLDYIIDTVPANHPLEPYXXXXXXXXXXXXTGVINTPMQFLTPMVMLGRKAITGSFI 300
            ADSLDY+IDTVP +H LEPY             GVIN P+QFLTP++MLGRK ITGSFI
Sbjct: 241 LADSLDYVIDTVPVHHALEPYLSLLKLDGKLILMGVINNPLQFLTPLLMLGRKVITGSFI 300
Query: 301 GSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGSKLD 356
           GSMKET+EMLEFC+EKG++S+IEV+KMDYVN AFERLEKNDVRYRFVVDV GS LD
Sbjct: 301 GSMKETEEMLEFCKEKGLSSIIEVVKMDYVNTAFERLEKNDVRYRFVVDVEGSNLD 356

>pdb|1YQD|A Chain A, Sinapyl Alcohol Dehydrogenase Complexed With Nadp+ Length = 366

Iteration: 1
 Score =  293 bits (751), Expect = 7e-80,   Method: Compositional matrix adjust.
 Identities = 146/344 (42%), Positives = 194/344 (56%)
Query: 10  TIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMXXXX 69
             GWAA+D SG LSP+ ++ R TG EDV  KVLYCG+CH+D+H IKND G S YP+    
Sbjct: 17  AFGWAARDQSGHLSPFNFSRRATGEEDVRFKVLYCGVCHSDLHSIKNDWGFSMYPLVPGH 76
Query: 70  XXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTDGK 129
                                         C +C  C  D+E YC K I +Y  +Y DG 
Sbjct: 77  EIVGEVTEVGSKVKKVNVGDKVGVGCLVGACHSCESCANDLENYCPKMILTYASIYHDGT 136
Query: 130 PTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXX 189
            T GG++  MV +++++++ PD M L+  APLLCAG+TV+SPL +FGL +          
Sbjct: 137 ITYGGYSNHMVANERYIIRFPDNMPLDGGAPLLCAGITVYSPLKYFGLDEPGKHIGIVGL 196
Query: 190 XXXXXXXXXXAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYII 249
                     AKA G  VTVIS+S  K+ EA+++ GAD +LVS D  +MQ AA +LD II
Sbjct: 197 GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSFLVSRDQEQMQAAAGTLDGII 256
Query: 250 DTVPANHPLEPYXXXXXXXXXXXXTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEM 309
           DTV A HPL P              G    P++     ++ GRK + GS IG MKET+EM
Sbjct: 257 DTVSAVHPLLPLFGLLKSHGKLILVGAPEKPLELPAFSLIAGRKIVAGSGIGGMKETQEM 316
Query: 310 LEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGS 353
           ++F  +  +T+ IEVI  DY+N A ERL KNDVRYRFV+DV  +
Sbjct: 317 IDFAAKHNITADIEVISTDYLNTAMERLAKNDVRYRFVIDVGNT 360

>pdb|1UUF|A Chain A, Crystal Structure Of A Zinc-Type Alcohol Dehydrogenase-Like Protein Yahk Length = 369

Iteration: 1
 Score =  194 bits (492), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 115/348 (33%), Positives = 178/348 (51%), Gaps = 14/348 (4%)
Query: 8   RATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMXX 67
           +A   ++AK P   L P   T R  G  DV I++ YCG+CH+D+HQ++++   + YP   
Sbjct: 24  KAVGAYSAKQP---LEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVP 80
Query: 68  XXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTD 127
                            +              C++C  CE  +E YC+    +YN    D
Sbjct: 81  GHEIVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPD 140
Query: 128 GKP--TQGGFAESMVVDQKFVVKIPDGM-ALEQAAPLLCAGVTVFSPLSHFGLKQSXXXX 184
            +P  T GG+++ +VV +++V++I      L   APLLCAG+T +SPL H+         
Sbjct: 141 -EPGHTLGGYSQQIVVHERYVLRIRHPQEQLAAVAPLLCAGITTYSPLRHW-QAGPGKKV 198
Query: 185 XXXXXXXXXXXXXXXAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADS 244
                          A AMG HV   ++S+ KR EA + LGAD+ + S +A  M     S
Sbjct: 199 GVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKR-EAAKALGADEVVNSRNADEMAAHLKS 257
Query: 245 LDYIIDTVPANHPLEPYXXXXXXXXXXXXTGVINTPMQFLTPMV---MLGRKAITGSFIG 301
            D+I++TV A H L+ +             G   TP +  +P V   ++ R+AI GS IG
Sbjct: 258 FDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPATPHK--SPEVFNLIMKRRAIAGSMIG 315
Query: 302 SMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVD 349
            + ET+EML+FC E G+ + IE+I+ D +N+A+ER+ + DV+YRFV+D
Sbjct: 316 GIPETQEMLDFCAEHGIVADIEMIRADQINEAYERMLRGDVKYRFVID 363

>pdb|3TWO|A Chain A, The Crystal Structure Of Cad From Helicobacter Pylori Complexed With Nadp(H) Length = 348

Iteration: 1
 Score =  157 bits (396), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 93/347 (26%), Positives = 160/347 (46%), Gaps = 12/347 (3%)
Query: 12  GWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMXXXXXX 71
           G+A         P+ ++    G  DV I +LY GICH+DIH   ++     YPM      
Sbjct: 7   GFAIFSKDEHFKPHDFSRHAVGPRDVLIDILYAGICHSDIHSAYSEWKEGIYPMIPGHEI 66
Query: 72  XXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNCRPCEADVEQYCNKKIWSYN--DVYTDGK 129
                        F              C+ C+PC+   EQ+C K +++Y+  D + D +
Sbjct: 67  AGIIKEVGKGVKKFKIGDVVGVGCFVNSCKACKPCKEHQEQFCTKVVFTYDCLDSFHDNE 126
Query: 130 PTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXX 189
           P  GG++ ++VVD+ +V+ +     LE+ APLLCAG+T +SPL  F              
Sbjct: 127 PHMGGYSNNIVVDENYVISVDKNAPLEKVAPLLCAGITTYSPLK-FSKVTKGTKVGVAGF 185
Query: 190 XXXXXXXXXXAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYII 249
                     A AMG  V+V + ++ K+ +A+  +G   +      T  ++  + LD+II
Sbjct: 186 GGLGSMAVKYAVAMGAEVSVFARNEHKKQDALS-MGVKHFY-----TDPKQCKEELDFII 239
Query: 250 DTVPANHPLEPYXXXXXXXXXXXXTG---VINTPMQFLTPMVMLGRKAITGSFIGSMKET 306
            T+P ++ L+ Y             G   V   P+  +   + LG + + GS IG +KET
Sbjct: 240 STIPTHYDLKDYLKLLTYNGDLALVGLPPVEVAPVLSVFDFIHLGNRKVYGSLIGGIKET 299
Query: 307 KEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGS 353
           +EM++F  +  +   I++I    ++ A+  L     ++R+V+D+  S
Sbjct: 300 QEMVDFSIKHNIYPEIDLILGKDIDTAYHNLTHGKAKFRYVIDMKKS 346

>pdb|1PS0|A Chain A, Crystal Structure Of The Nadp(H)-Dependent Cinnamyl Alcohol Dehydrogenase From Saccharomyces Cerevisiae Length = 360

Iteration: 1
 Score =  128 bits (322), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 95/320 (29%), Positives = 145/320 (45%), Gaps = 10/320 (3%)
Query: 36  DVYIKVLYCGICHTDIHQIKNDLGMSNYPMXXXXXXXXXXXXXX-XXXSNFXXXXXXXXX 94
           D+ IK+  CG+C +DIH      G    P+                  S           
Sbjct: 35  DIDIKIEACGVCGSDIHCAAGHWGNMKMPLVVGHEIVGKVVKLGPKSNSGLKVGQRVGVG 94
Query: 95  XXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMA 154
                C  C  C+ D E YC K + +Y+  Y DG  +QGG+A  + V + FVV IP+ + 
Sbjct: 95  AQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPIPENIP 154
Query: 155 LEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSSD 214
              AAPLLC G+TV+SPL   G                       +KAMG    VIS S 
Sbjct: 155 SHLAAPLLCGGLTVYSPLVRNGCGPG-KKVGIVGLGGIGSMGTLISKAMGAETYVISRSS 213
Query: 215 KKRVEAMEHLGADQYLVSSDATRMQEAA-DSLDYIIDTVPANHPLEPYXXXXXXXXXXXX 273
           +KR +AM+ +GAD Y+ + +     E   D+ D I+    +   ++ +            
Sbjct: 214 RKREDAMK-MGADHYIATLEEGDWGEKYFDTFDLIVVCASSLTDID-FNIMPKAMKVGGR 271
Query: 274 TGVINTPMQF-LTPMVMLGRKAITGSF--IGSMKETKEMLEFCREKGVTSMIEVIKMDY- 329
              I+ P Q  +  +   G KA++ S+  +GS+KE  ++L+   EK +   +E + +   
Sbjct: 272 IVSISIPEQHEMLSLKPYGLKAVSISYSALGSIKELNQLLKLVSEKDIKIWVETLPVGEA 331
Query: 330 -VNKAFERLEKNDVRYRFVV 348
            V++AFER+EK DVRYRF +
Sbjct: 332 GVHEAFERMEKGDVRYRFTL 351

>pdb|1RJW|A Chain A, Crystal Structure Of Nad(+)-Dependent Alcohol Dehydrogenase From Bacillus Stearothermophilus Strain Lld-R Length = 339

Iteration: 1
 Score = 97.4 bits (241), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 78/317 (24%), Positives = 128/317 (40%), Gaps = 13/317 (4%)
Query: 36  DVYIKVLYCGICHTDIHQIKNDLGMS-NYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXX 94
           +V +++  CG+CHTD+H    D  +    P+                 ++          
Sbjct: 27  EVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGIVEEVGPGVTHLKVGDRVGIP 86
Query: 95  XXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMA 154
                C +C  C +  E  C  +          G    GG+AE       +VVKIPD ++
Sbjct: 87  WLYSACGHCDYCLSGQETLCEHQ-------KNAGYSVDGGYAEYCRAAADYVVKIPDNLS 139
Query: 155 LEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSSD 214
            E+AAP+ CAGVT +  L   G K                     AKAMG +V  +   D
Sbjct: 140 FEEAAPIFCAGVTTYKALKVTGAKPG-EWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGD 198
Query: 215 KKRVEAMEHLGADQYL--VSSDATR-MQEAADSLDYIIDTVPANHPLEPYXXXXXXXXXX 271
           +K +E  + LGAD  +  +  DA + M+E    +   + T  +    +            
Sbjct: 199 EK-LELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAVVTAVSKPAFQSAYNSIRRGGAC 257
Query: 272 XXTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEVIKMDYVN 331
              G+    M       +L    I GS +G+ K+ +E L+F  E  V ++IEV  ++ +N
Sbjct: 258 VLVGLPPEEMPIPIFDTVLNGIKIIGSIVGTRKDLQEALQFAAEGKVKTIIEVQPLEKIN 317
Query: 332 KAFERLEKNDVRYRFVV 348
           + F+R+ K  +  R V+
Sbjct: 318 EVFDRMLKGQINGRVVL 334

>pdb|3PII|A Chain A, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase With Substrate Analogue Butyramide Length = 339

Iteration: 1
 Score = 97.1 bits (240), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 78/317 (24%), Positives = 128/317 (40%), Gaps = 13/317 (4%)
Query: 36  DVYIKVLYCGICHTDIHQIKNDLGMS-NYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXX 94
           +V +++  CG+CHTD+H    D  +    P+                 ++          
Sbjct: 27  EVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGIVEEVGPGVTHLKVGDRVGIP 86
Query: 95  XXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMA 154
                C +C  C +  E  C  +          G    GG+AE       +VVKIPD ++
Sbjct: 87  WLYSACGHCDYCLSGQETLCEHQ-------KNAGYSVDGGYAEYCRAAADYVVKIPDNLS 139
Query: 155 LEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSSD 214
            E+AAP+ CAGVT +  L   G K                     AKAMG +V  +   D
Sbjct: 140 FEEAAPIFCAGVTTYKALKVTGAKPG-EWVAIYGIGGFGHVAVQYAKAMGLNVVAVDIGD 198
Query: 215 KKRVEAMEHLGADQYL--VSSDATR-MQEAADSLDYIIDTVPANHPLEPYXXXXXXXXXX 271
           +K +E  + LGAD  +  +  DA + M+E    +   + T  +    +            
Sbjct: 199 EK-LELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAVVTAVSKPAFQSAYNSIRRGGAC 257
Query: 272 XXTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEVIKMDYVN 331
              G+    M       +L    I GS +G+ K+ +E L+F  E  V ++IEV  ++ +N
Sbjct: 258 VLVGLPPEEMPIPIFDTVLNGIKIIGSIVGTRKDLQEALQFAAEGKVKTIIEVQPLEKIN 317
Query: 332 KAFERLEKNDVRYRFVV 348
           + F+R+ K  +  R V+
Sbjct: 318 EVFDRMLKGQINGRVVL 334

>pdb|3S1L|A Chain A, Crystal Structure Of Apo-Form Furx Length = 340

Iteration: 1
 Score = 83.6 bits (205), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 79/327 (24%), Positives = 118/327 (36%), Gaps = 25/327 (7%)
Query: 33  GAEDVYIKVLYCGICHTDIHQIKNDLGMS-NYPMXXXXXXXXXXXXXXXXXSNFXXXXXX 91
           G   V +K+   G+CHTD+H    D  +    P                  S        
Sbjct: 26  GPGQVQVKIEASGVCHTDLHAADGDWPVKPTLPFIPGHEGVGYVSAVGSGVSRVKEGDRV 85
Query: 92  XXXXXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPD 151
                   C  C  C    E  C K+          G    GG+ E +V D  +V  +PD
Sbjct: 86  GVPWLYSACGYCEHCLQGWETLCEKQ-------QNTGYSVNGGYGEYVVADPNYVGLLPD 138
Query: 152 GMALEQAAPLLCAGVTVFSPLSHFGLK----QSXXXXXXXXXXXXXXXXXXXAKAMGHHV 207
            +   + AP+LCAGVTV+      GLK    +                    A+AMG  V
Sbjct: 139 KVGFVEIAPILCAGVTVYK-----GLKVTDTRPGQWVVISGIGGLGHVAVQYARAMGLRV 193
Query: 208 TVISSSDKKRVEAMEHLGADQYLVSSD---ATRMQEAADSLDYIIDTVPANHPLEPYXXX 264
             +   D K +     LGA+  + + D   A  +Q+       ++ T  +          
Sbjct: 194 AAVDIDDAK-LNLARRLGAEVAVNARDTDPAAWLQKEIGGAHGVLVTAVSPKAFSQAIGM 252
Query: 265 XXXXXXXXXTGVINTPMQFLTPM--VMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMI 322
                     G+   P  F TP+  V+L    I GS +G+  + +E L+F     V + +
Sbjct: 253 VRRGGTIALNGL--PPGDFGTPIFDVVLKGITIRGSIVGTRSDLQESLDFAAHGDVKATV 310
Query: 323 EVIKMDYVNKAFERLEKNDVRYRFVVD 349
              K+D VN  F RL +  V  R V+D
Sbjct: 311 STAKLDDVNDVFGRLREGKVEGRVVLD 337

>pdb|4EEZ|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol Dehydrogenase Variant Re1 Length = 348

Iteration: 1
 Score = 82.0 bits (201), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 69/338 (20%), Positives = 117/338 (34%), Gaps = 14/338 (4%)
Query: 17  DPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMXXXXXXXXXXX 76
           +P G        LR     +  + + YCG+CHTD+H    D G +               
Sbjct: 9   NPDGYADLVEKELRAIKPNEALLDMEYCGVCHTDLHVAAGDFG-NKAGTVLGHEGIGIVK 67
Query: 77  XXXXXXSNFXXXXXXXXXXXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFA 136
                 S+               C +C  C +  E +C        +V   G    GG A
Sbjct: 68  EIGADVSSLQVGDRVSVAWFFEGCGHCEYCVSGNETFCR-------EVKNAGYSVDGGMA 120
Query: 137 ESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXX 196
           E  +V   + VK+PDG+   +A+ + CAGVT +  +   G+K                  
Sbjct: 121 EEAIVVADYAVKVPDGLDPIEASSITCAGVTTYKAIKVSGVKPGDWQVIFGAGGLGNLAI 180
Query: 197 XXXAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQE-----AADSLDYIIDT 251
                  G  V  +   ++ ++   + +GAD  + S D   + E         +   I  
Sbjct: 181 QYAKNVFGAKVIAV-DINQDKLNLAKKIGADVTINSGDVNPVDEIKKITGGLGVQSAIVC 239
Query: 252 VPANHPLEPYXXXXXXXXXXXXTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLE 311
             A    E                V NT M    P V+     + GS +G+  +  E  +
Sbjct: 240 AVARIAFEQAVASLKPMGKMVAVAVPNTEMTLSVPTVVFDGVEVAGSLVGTRLDLAEAFQ 299
Query: 312 FCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVD 349
           F  E  V  ++   K++ +N   + ++   +  R V+D
Sbjct: 300 FGAEGKVKPIVATRKLEEINDIIDEMKAGKIEGRMVID 337

>pdb|4EEX|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol Dehydrogenase Length = 348

Iteration: 1
 Score = 80.1 bits (196), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 68/338 (20%), Positives = 117/338 (34%), Gaps = 14/338 (4%)
Query: 17  DPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMXXXXXXXXXXX 76
           +P G        LR     +  + + YCG+CHTD+H    D G +               
Sbjct: 9   NPDGYADLVEKELRAIKPNEALLDMEYCGVCHTDLHVAAGDYG-NKAGTVLGHEGIGIVK 67
Query: 77  XXXXXXSNFXXXXXXXXXXXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFA 136
                 S+               C +C  C +  E +C        +V   G    GG A
Sbjct: 68  EIGADVSSLQVGDRVSVAWFFEGCGHCEYCVSGNETFCR-------EVKNAGYSVDGGMA 120
Query: 137 ESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXX 196
           E  +V   + VK+PDG+   +A+ + CAGVT +  +   G+K                  
Sbjct: 121 EEAIVVADYAVKVPDGLDPIEASSITCAGVTTYKAIKVSGVKPGDWQVIFGAGGLGNLAI 180
Query: 197 XXXAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQE-----AADSLDYIIDT 251
                  G  V  +   ++ ++   + +GAD  + S D   + E         +   I  
Sbjct: 181 QYAKNVFGAKVIAV-DINQDKLNLAKKIGADVIINSGDVNPVDEIKKITGGLGVQSAIVC 239
Query: 252 VPANHPLEPYXXXXXXXXXXXXTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLE 311
             A    E                + NT M    P V+     + GS +G+  +  E  +
Sbjct: 240 AVARIAFEQAVASLKPMGKMVAVALPNTEMTLSVPTVVFDGVEVAGSLVGTRLDLAEAFQ 299
Query: 312 FCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVD 349
           F  E  V  ++   K++ +N   + ++   +  R V+D
Sbjct: 300 FGAEGKVKPIVATRKLEEINDIIDEMKAGKIEGRMVID 337

>pdb|2HCY|A Chain A, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae Fermentative Enzyme Length = 347

Iteration: 1
 Score = 79.0 bits (193), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 74/337 (21%), Positives = 123/337 (36%), Gaps = 39/337 (11%)
Query: 34  AEDVYIKVLYCGICHTDIHQIKNDLGMS-NYPMXXXXXXXXXXXXXXXXXSNFXXXXXXX 92
           A ++ I V Y G+CHTD+H    D  +    P+                   +       
Sbjct: 30  ANELLINVKYSGVCHTDLHAWHGDWPLPVKLPLVGGHEGAGVVVGMGENVKGWKIGDYAG 89
Query: 93  XXXXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDG 152
                  C  C  CE   E  C      + D+   G    G F +    D      IP G
Sbjct: 90  IKWLNGSCMACEYCELGNESNC-----PHADL--SGYTHDGSFQQYATADAVQAAHIPQG 142
Query: 153 MALEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISS 212
             L Q AP+LCAG+TV+  L    L                      AKAMG+ V  I  
Sbjct: 143 TDLAQVAPILCAGITVYKALKSANLMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDG 202
Query: 213 SDKKRVEAMEHLGADQYLVSSDATRMQEAADSL--------DYIIDTVPANHPLEPYXXX 264
            + K  E    +G + ++   D T+ ++   ++          +I+   +   +E     
Sbjct: 203 GEGKE-ELFRSIGGEVFI---DFTKEKDIVGAVLKATDGGAHGVINVSVSEAAIEASTRY 258
Query: 265 XXXXXXXXXTG----------VINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCR 314
                     G          V N  ++ ++         I GS++G+  +T+E L+F  
Sbjct: 259 VRANGTTVLVGMPAGAKCCSDVFNQVVKSIS---------IVGSYVGNRADTREALDFFA 309
Query: 315 EKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVA 351
              V S I+V+ +  + + +E++EK  +  R+VVD +
Sbjct: 310 RGLVKSPIKVVGLSTLPEIYEKMEKGQIVGRYVVDTS 346

>pdb|3MEQ|A Chain A, Crystal Structure Of Alcohol Dehydrogenase From Brucella Mel Length = 365

Iteration: 1
 Score = 77.8 bits (190), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 69/324 (21%), Positives = 123/324 (37%), Gaps = 15/324 (4%)
Query: 33  GAEDVYIKVLYCGICHTDIHQIKNDLGMS-NYPMXXXXXXXXXXXXXXXXXSNFXXXXXX 91
           G   + + +   G+CHTD+H  + D  +  N P                   +       
Sbjct: 49  GPGQIQVAIQASGVCHTDLHAAEGDWPVKPNPPFIPGHEGVGFVSAVGSGVKHVKEGDRV 108
Query: 92  XXXXXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPD 151
                   C +CR C    E  C +++         G    GGFAE +V D  FV  +P 
Sbjct: 109 GIPWLYTACGHCRHCLGGWETLCEEQL-------NTGYSVNGGFAEYVVADPNFVGHLPK 161
Query: 152 GMALEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVIS 211
            +   + AP+LCAGVTV+  L     K                     A+AMG +V  + 
Sbjct: 162 NIDFNEIAPVLCAGVTVYKGLKVTDTKPG-DWVVISGIGGLGHMAVQYARAMGLNVAAVD 220
Query: 212 SSDKKRVEAMEHLGA----DQYLVSSDATRMQEAAD-SLDYIIDTVPANHPLEPYXXXXX 266
             D+K ++    LGA    +   V+  A  +++  D     ++ T  +    E       
Sbjct: 221 IDDRK-LDLARRLGATVTVNAKTVADPAAYIRKETDGGAQGVLVTAVSPKAFEQALGMVA 279
Query: 267 XXXXXXXTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEVIK 326
                   G+           ++L    + GS +G+  + +E L+F  +  V + I+  K
Sbjct: 280 RGGTVSLNGLPPGDFPLSIFNMVLNGVTVRGSIVGTRLDLQESLDFAADGKVKATIQTGK 339
Query: 327 MDYVNKAFERLEKNDVRYRFVVDV 350
           ++ +N  F+ + + ++  R V+D+
Sbjct: 340 LEDINAIFDDMRQGNIEGRIVMDL 363

>pdb|1LLU|A Chain A, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol Dehydrogenase With Its Coenzyme And Weak Substrate Length = 342

Iteration: 1
 Score = 77.4 bits (189), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 75/328 (22%), Positives = 120/328 (36%), Gaps = 25/328 (7%)
Query: 33  GAEDVYIKVLYCGICHTDIHQIKNDLGMSN-YPMXXXXXXXXXXXXXXXXXSNFXXXXXX 91
           G   V +K+   G+CHTD+H  + D  +    P                  +        
Sbjct: 30  GPGQVLVKIEASGVCHTDLHAAEGDWPVKPPLPFIPGHEGVGYVAAVGSGVTRVKEGDRV 89
Query: 92  XXXXXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPD 151
                   C  C  C    E  C  +          G    GG+AE ++ D  +V  +P 
Sbjct: 90  GIPWLYTACGCCEHCLTGWETLCESQ-------QNTGYSVNGGYAEYVLADPNYVGILPK 142
Query: 152 GMALEQAAPLLCAGVTVFSPLSHFGLKQSXXX----XXXXXXXXXXXXXXXXAKAMGHHV 207
            +   + AP+LCAGVTV+      GLKQ+                       A+AMG HV
Sbjct: 143 NVEFAEIAPILCAGVTVYK-----GLKQTNARPGQWVAISGIGGLGHVAVQYARAMGLHV 197
Query: 208 TVISSSDKKRVEAMEHLGADQYLVSSD---ATRMQEAADSLDYIIDTVPANHPLEPYXXX 264
             I   D K +E    LGA   + +        +Q        ++ T  +N         
Sbjct: 198 AAIDIDDAK-LELARKLGASLTVNARQEDPVEAIQRDIGGAHGVLVTAVSNSAFGQAIGM 256
Query: 265 XXXXXXXXXTGVINTPMQFLTPM--VMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMI 322
                     G+   P  F TP+  V+L    I GS +G+  + +E L+F  E  V + I
Sbjct: 257 ARRGGTIALVGL--PPGDFPTPIFDVVLKGLHIAGSIVGTRADLQEALDFAGEGLVKATI 314
Query: 323 EVIKMDYVNKAFERLEKNDVRYRFVVDV 350
              K+D +N+  +++    +  R V+++
Sbjct: 315 HPGKLDDINQILDQMRAGQIEGRIVLEM 342

>pdb|1R37|A Chain A, Alcohol Dehydrogenase From Sulfolobus Solfataricus Complexed With Nad(H) And 2-Ethoxyethanol Length = 347

Iteration: 1
 Score = 59.3 bits (142), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 68/319 (21%), Positives = 117/319 (36%), Gaps = 28/319 (8%)
Query: 37  VYIKVLYCGICHTDIH---------QIKNDLGMSNYPMXXXXXXXXXXXXXXXXXSNFXX 87
           V IKV   G+CH+D+H         +I  DLG+   P+                   +  
Sbjct: 28  VLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGV-KLPVTLGHEIAGKIEEVGDEVVGYSK 86
Query: 88  XXXXXXXXXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQ-KFV 146
                         NC  C    E  C+   W        G    G +AE ++V   K++
Sbjct: 87  GDLVAVNPWQGEG-NCYYCRIGEEHLCDSPRWL-------GINFDGAYAEYVIVPHYKYM 138
Query: 147 VKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHH 206
            K+    A+E AAPL C+G+T +  +    L  +                   AKA+   
Sbjct: 139 YKLRRLNAVE-AAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGA 197
Query: 207 VTVISSSDKKRVEAMEHLGADQYLVSS------DATRMQEAADSLDYIIDTVPANHPLEP 260
             +     ++ VEA +  GAD  + +S      +  R+ E+   +D +ID   +   L  
Sbjct: 198 TIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITES-KGVDAVIDLNNSEKTLSV 256
Query: 261 YXXXXXXXXXXXXTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTS 320
           Y             G+    + +  P++ L      GS +G+  +   ++       V  
Sbjct: 257 YPKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFVGSLVGNQSDFLGIMRLAEAGKVKP 316
Query: 321 MI-EVIKMDYVNKAFERLE 338
           MI + +K++  N+A + LE
Sbjct: 317 MITKTMKLEEANEAIDNLE 335

>pdb|3I4C|A Chain A, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh) Double Mutant (W95l,N249y) Length = 347

Iteration: 1
 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 68/319 (21%), Positives = 117/319 (36%), Gaps = 28/319 (8%)
Query: 37  VYIKVLYCGICHTDIH---------QIKNDLGMSNYPMXXXXXXXXXXXXXXXXXSNFXX 87
           V IKV   G+CH+D+H         +I  DLG+   P+                   +  
Sbjct: 28  VLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGV-KLPVTLGHEIAGKIEEVGDEVVGYSK 86
Query: 88  XXXXXXXXXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQ-KFV 146
                         NC  C    E  C+   W        G    G +AE ++V   K++
Sbjct: 87  GDLVAVNPLQGEG-NCYYCRIGEEHLCDSPRWL-------GINFDGAYAEYVIVPHYKYM 138
Query: 147 VKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHH 206
            K+    A+E AAPL C+G+T +  +    L  +                   AKA+   
Sbjct: 139 YKLRRLNAVE-AAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGA 197
Query: 207 VTVISSSDKKRVEAMEHLGADQYLVSS------DATRMQEAADSLDYIIDTVPANHPLEP 260
             +     ++ VEA +  GAD  + +S      +  R+ E+   +D +ID   +   L  
Sbjct: 198 TIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITES-KGVDAVIDLNYSEKTLSV 256
Query: 261 YXXXXXXXXXXXXTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTS 320
           Y             G+    + +  P++ L      GS +G+  +   ++       V  
Sbjct: 257 YPKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFVGSLVGNQSDFLGIMRLAEAGKVKP 316
Query: 321 MI-EVIKMDYVNKAFERLE 338
           MI + +K++  N+A + LE
Sbjct: 317 MITKTMKLEEANEAIDNLE 335

>pdb|1NTO|A Chain A, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon Sulfolobus Solfataricus-Monoclinic Crystal Form Length = 347

Iteration: 1
 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 68/319 (21%), Positives = 117/319 (36%), Gaps = 28/319 (8%)
Query: 37  VYIKVLYCGICHTDIH---------QIKNDLGMSNYPMXXXXXXXXXXXXXXXXXSNFXX 87
           V IKV   G+CH+D+H         +I  DLG+   P+                   +  
Sbjct: 28  VLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGV-KLPVTLGHEIAGKIEEVGDEVVGYSK 86
Query: 88  XXXXXXXXXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQ-KFV 146
                         NC  C    E  C+   W        G    G +AE ++V   K++
Sbjct: 87  GDLVAVNPWQGEG-NCYYCRIGEEHLCDSPRWL-------GINFDGAYAEYVIVPHYKYM 138
Query: 147 VKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHH 206
            K+    A+E AAPL C+G+T +  +    L  +                   AKA+   
Sbjct: 139 YKLRRLNAVE-AAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGA 197
Query: 207 VTVISSSDKKRVEAMEHLGADQYLVSS------DATRMQEAADSLDYIIDTVPANHPLEP 260
             +     ++ VEA +  GAD  + +S      +  R+ E+   +D +ID   +   L  
Sbjct: 198 TIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITES-KGVDAVIDLNYSEKTLSV 256
Query: 261 YXXXXXXXXXXXXTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTS 320
           Y             G+    + +  P++ L      GS +G+  +   ++       V  
Sbjct: 257 YPKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFVGSLVGNQSDFLGIMRLAEAGKVKP 316
Query: 321 MI-EVIKMDYVNKAFERLE 338
           MI + +K++  N+A + LE
Sbjct: 317 MITKTMKLEEANEAIDNLE 335

>pdb|2EER|A Chain A, Structural Study Of Project Id St2577 From Sulfolobus Tokodaii Strain7 Length = 347

Iteration: 1
 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/318 (20%), Positives = 114/318 (35%), Gaps = 26/318 (8%)
Query: 37  VYIKVLYCGICHTDIH---------QIKNDLGMSNYPMXXXXXXXXXXXXXXXXXSNFXX 87
           V IK+   G+CH+D+H         +I  DLG+   P+                   +  
Sbjct: 28  VLIKIEAAGVCHSDVHMRQGRFGNLRIVEDLGV-KLPVTLGHEIAGRIEEVGDEVVGYSK 86
Query: 88  XXXXXXXXXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQ-KFV 146
                         NC  C    E  C+   W        G    G +AE ++V   K++
Sbjct: 87  GDLVAVNPWEGEG-NCYYCRIGEEHLCDSPRWL-------GINYDGAYAEYVLVPHYKYL 138
Query: 147 VKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHH 206
            K+    A+E AAPL C+GVT +  +    L  S                   AKA+   
Sbjct: 139 YKLRRLSAVE-AAPLTCSGVTTYRAVRKASLDPSKTLVVIGAGGGLGTMAIQIAKAVSGA 197
Query: 207 VTVISSSDKKRVEAMEHLGADQYLVSSDATRMQE-----AADSLDYIIDTVPANHPLEPY 261
             +     ++ +EA +  GAD  + +S    + E          D +ID   +   L  Y
Sbjct: 198 TIIGVDVREEALEAAKRAGADYVINASSQDPVSEIRRITQGKGADAVIDLNNSEKTLSIY 257
Query: 262 XXXXXXXXXXXXTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSM 321
                        G+    +++  P++ L      GS +G+  +   ++       V  M
Sbjct: 258 PYVLAKQGKYVMVGLFGADLKYHAPLITLNEVQFIGSLVGNQSDFLGIMSLAEAGKVKPM 317
Query: 322 I-EVIKMDYVNKAFERLE 338
           + + +K++  N+A + LE
Sbjct: 318 VTKTMKLEEANEAIDNLE 335

>pdb|1JVB|A Chain A, Alcohol Dehydrogenase From The Archaeon Sulfolobus Solfataricus Length = 347

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 69/319 (21%), Positives = 115/319 (36%), Gaps = 28/319 (8%)
Query: 37  VYIKVLYCGICHTDIH---------QIKNDLGMSNYPMXXXXXXXXXXXXXXXXXSNFXX 87
           V IKV   G+CH+D+H         +I  DLG+   P+                   +  
Sbjct: 28  VLIKVEAAGVCHSDVHXRQGRFGNLRIVEDLGV-KLPVTLGHEIAGKIEEVGDEVVGYSK 86
Query: 88  XXXXXXXXXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQ-KFV 146
                         NC  C    E  C+   W        G    G +AE ++V   K+ 
Sbjct: 87  GDLVAVNPWQGEG-NCYYCRIGEEHLCDSPRWL-------GINFDGAYAEYVIVPHYKYX 138
Query: 147 VKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHH 206
            K+    A+E AAPL C+G+T +  +    L  +                   AKA+   
Sbjct: 139 YKLRRLNAVE-AAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTXAVQIAKAVSGA 197
Query: 207 VTVISSSDKKRVEAMEHLGADQYLVSS------DATRMQEAADSLDYIIDTVPANHPLEP 260
             +     ++ VEA +  GAD  + +S      +  R+ E+   +D +ID   +   L  
Sbjct: 198 TIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITES-KGVDAVIDLNNSEKTLSV 256
Query: 261 YXXXXXXXXXXXXTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTS 320
           Y             G+    + +  P++ L      GS +G+  +   +        V  
Sbjct: 257 YPKALAKQGKYVXVGLFGADLHYHAPLITLSEIQFVGSLVGNQSDFLGIXRLAEAGKVKP 316
Query: 321 MI-EVIKMDYVNKAFERLE 338
            I +  K++  N+A + LE
Sbjct: 317 XITKTXKLEEANEAIDNLE 335

>pdb|1H2B|A Chain A, Crystal Structure Of The Alcohol Dehydrogenase From The Hyperthermophilic Archaeon Aeropyrum Pernix At 1.65a Resolution Length = 359

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 68/334 (20%), Positives = 122/334 (36%), Gaps = 28/334 (8%)
Query: 30  RNTGAEDVYIKVLYCGICHTDIHQIK---NDLGMSNYPMXXXXXXXXXXXXXXXXXSNFX 86
           R  G  DV +++   G+CHTD+H ++   ++L     P                      
Sbjct: 37  RLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEEVAEGVEGLE 96
Query: 87  XXXXXXXXXXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFV 146
                           C  C A  + +C        ++   G    GGFAE M    + V
Sbjct: 97  KGDPVILHPAVTDG-TCLACRAGEDMHCE-------NLEFPGLNIDGGFAEFMRTSHRSV 148
Query: 147 VKIPDGMALE---QAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAM 203
           +K+P  ++ E   + APL  AG+T +  +                              +
Sbjct: 149 IKLPKDISREKLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKV 208
Query: 204 GHHVTVISSSDKK-RVEAMEHLGADQYLVSS--------DATRMQEAADSLDYIIDTVPA 254
               TVI+   K+ +++  E LGAD  + +         + TR +    ++D++      
Sbjct: 209 MTPATVIALDVKEEKLKLAERLGADHVVDARRDPVKQVMELTRGRGVNVAMDFVGSQATV 268
Query: 255 NHPLEPYXXXXXXXXXXXXTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCR 314
           ++   PY             G     ++F T  V+    +  GS +G+  E  E++    
Sbjct: 269 DYT--PYLLGRMGRLIIVGYG---GELRFPTIRVISSEVSFEGSLVGNYVELHELVTLAL 323
Query: 315 EKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVV 348
           +  V   +++ K+D +N   ERLEK +V  R V+
Sbjct: 324 QGKVRVEVDIHKLDEINDVLERLEKGEVLGRAVL 357

>pdb|2XAA|A Chain A, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm 44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol Length = 345

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 68/329 (20%), Positives = 113/329 (34%), Gaps = 22/329 (6%)
Query: 33  GAEDVYIKVLYCGICHTDIHQIKNDLGMSNY----PMXXXXXXXXXXXXXXXXXSNFXXX 88
           G  ++ +KV   G+CH+DI  +  D+  + Y    P+                 + F   
Sbjct: 24  GPGEILLKVTAAGLCHSDIFVM--DMPAAQYAYGLPLTLGHEGVGTVAELGEGVTGFGVG 81
Query: 89  XXXXXXXXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQ-KFVV 147
                     C   C  C    E YC +   +   +   G  + G  AE M+VD  + +V
Sbjct: 82  DAVAVYGPWGCG-ACHACARGRENYCTRA--ADLGITPPGLGSPGSMAEYMIVDSARHLV 138
Query: 148 KIPDGMALEQAAPLLCAGVTVFSPLSH-FGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHH 206
            I D +    AAPL  AG+T +  +S    L                       +A+   
Sbjct: 139 PIGD-LDPVAAAPLTDAGLTPYHAISRVLPLLGPGSTAVVIGVGGLGHVGIQILRAVSAA 197
Query: 207 VTVISSSDKKRVEAMEHLGADQYLVS----SDATRMQEAADSLDYIIDTVPANHPLEPYX 262
             +    D  R+     +GAD  + S    +DA R          + D V A   ++   
Sbjct: 198 RVIAVDLDDDRLALAREVGADAAVKSGAGAADAIRELTGGQGATAVFDFVGAQSTIDTAQ 257
Query: 263 XXXXXXXXXXXTGV---INTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVT 319
                       G+    +  + F   M+  G   +T  + G+  E  E++   R   + 
Sbjct: 258 QVVAVDGHISVVGIHAGAHAKVGFF--MIPFGASVVT-PYWGTRSELMEVVALARAGRLD 314
Query: 320 SMIEVIKMDYVNKAFERLEKNDVRYRFVV 348
              E   +D    A+ RL +  +R R VV
Sbjct: 315 IHTETFTLDEGPAAYRRLREGSIRGRGVV 343

>pdb|2H6E|A Chain A, Crystal Structure Of The D-Arabinose Dehydrogenase From Sulfolobus Solfataricus Length = 344

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 62/258 (24%), Positives = 104/258 (40%), Gaps = 21/258 (8%)
Query: 100 CRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVV-DQKFVVKIPDGMALEQA 158
           CR CR  + ++   C  +I         G+ T GGF+E M+V   +++VK+ + ++  +A
Sbjct: 97  CRYCREGKFNI---CKNQI-------IPGQTTNGGFSEYMLVKSSRWLVKL-NSLSPVEA 145
Query: 159 APLLCAGVTVFSPLSH---FGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTV--ISSS 213
           APL  AG T    +     F  K +                    KA+  ++T+  IS S
Sbjct: 146 APLADAGTTSMGAIRQALPFISKFAEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRS 205
Query: 214 DKKRVEAMEHLGADQYLVSSDA-TRMQEAADSL--DYIIDTVPANHPLEPYXXXXXXXXX 270
            K R  A+E LGAD      DA + + +  D L     ID V                  
Sbjct: 206 KKHRDFALE-LGADYVSEMKDAESLINKLTDGLGASIAIDLVGTEETTYNLGKLLAQEGA 264
Query: 271 XXXTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEVIKMDYV 330
               G+    +        +  K + GS  GS+ + ++++       +   I  + +D +
Sbjct: 265 IILVGMEGKRVSLEAFDTAVWNKKLLGSNYGSLNDLEDVVRLSESGKIKPYIIKVPLDDI 324
Query: 331 NKAFERLEKNDVRYRFVV 348
           NKAF  L++  V  R V+
Sbjct: 325 NKAFTNLDEGRVDGRQVI 342

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	357
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	0.0
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	0.0
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	0.0
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	0.0
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	0.0
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	1e-146
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	1e-146
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	1e-142
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	7e-86
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	3e-85
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	4e-84
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	6e-83
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	3e-52
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	4e-52
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	4e-50
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	2e-48
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	7e-48
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	1e-47
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	2e-46
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	1e-43
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	3e-43
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	2e-42
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	4e-41
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	8e-41
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	8e-40
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	9e-39
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	6e-38
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	5e-36
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	6e-36
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	1e-35
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	4e-35
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	3e-34
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	3e-34
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	8e-34
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	5e-32
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	7e-32
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	7e-32
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	2e-31
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	8e-31
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	1e-30
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	4e-30
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	5e-30
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	1e-29
4eye_A	342	Probable oxidoreductase; structural genomics, niai	1e-29
3gms_A	340	Putative NADPH:quinone reductase; structural genom	1e-28
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	3e-28
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	5e-28
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	7e-27
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	1e-26
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	1e-24
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	4e-24
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	8e-23
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	1e-22
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	2e-22
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	2e-22
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	2e-22
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	2e-20
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	8e-20
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	1e-18
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	2e-17
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	4e-16
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	4e-15
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	3e-14
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	1e-11
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	3e-08
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	2e-05
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	6e-05
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	3e-04
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	5e-04

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* Length = 357

 Score =  598 bits (1543), Expect = 0.0
 Identities = 283/356 (79%), Positives = 316/356 (88%)

Query: 1   MGSLDTERATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGM 60
           MG ++ ER T GWAA+DPSGILSPYTYTLR TG EDV I+++ CGICHTD+HQ KNDLGM
Sbjct: 1   MGIMEAERKTTGWAARDPSGILSPYTYTLRETGPEDVNIRIICCGICHTDLHQTKNDLGM 60

Query: 61  SNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWS 120
           SNYPMVPGHEVVGEV EVGS+VS F VGD VGVG LVGCC  C PCE D+EQYC KKIWS
Sbjct: 61  SNYPMVPGHEVVGEVVEVGSDVSKFTVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWS 120

Query: 121 YNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQS 180
           YNDVY +G+PTQGGFA++ VV QKFVVKIP+GMA+EQAAPLLCAGVTV+SPLSHFGLKQ 
Sbjct: 121 YNDVYINGQPTQGGFAKATVVHQKFVVKIPEGMAVEQAAPLLCAGVTVYSPLSHFGLKQP 180

Query: 181 GLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQE 240
           GLRGGILGLGGVGHMGV IAKAMGHHVTVISSS+KKR EA++ LGAD Y++ SD  +M E
Sbjct: 181 GLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYVIGSDQAKMSE 240

Query: 241 AADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFI 300
            ADSLDY+IDTVP +H LEPYLSLLKLDGKLIL GVIN P+QFLTP++MLGRK ITGSFI
Sbjct: 241 LADSLDYVIDTVPVHHALEPYLSLLKLDGKLILMGVINNPLQFLTPLLMLGRKVITGSFI 300

Query: 301 GSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGSKLD 356
           GSMKET+EMLEFC+EKG++S+IEV+KMDYVN AFERLEKNDVRYRFVVDV GS LD
Sbjct: 301 GSMKETEEMLEFCKEKGLSSIIEVVKMDYVNTAFERLEKNDVRYRFVVDVEGSNLD 356

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* Length = 366

 Score =  597 bits (1541), Expect = 0.0
 Identities = 191/357 (53%), Positives = 245/357 (68%), Gaps = 3/357 (0%)

Query: 1   MGSLDTERATI---GWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKND 57
           M     E   +   GWAA+D SG LSP+ ++ R TG EDV  KVLYCG+CH+D+H IKND
Sbjct: 5   MSKSPEEEHPVKAFGWAARDQSGHLSPFNFSRRATGEEDVRFKVLYCGVCHSDLHSIKND 64

Query: 58  LGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKK 117
            G S YP+VPGHE+VGEV EVGS+V    VGDKVGVG LVG C +C  C  D+E YC K 
Sbjct: 65  WGFSMYPLVPGHEIVGEVTEVGSKVKKVNVGDKVGVGCLVGACHSCESCANDLENYCPKM 124

Query: 118 IWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGL 177
           I +Y  +Y DG  T GG++  MV +++++++ PD M L+  APLLCAG+TV+SPL +FGL
Sbjct: 125 ILTYASIYHDGTITYGGYSNHMVANERYIIRFPDNMPLDGGAPLLCAGITVYSPLKYFGL 184

Query: 178 KQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATR 237
            + G   GI+GLGG+GH+ V  AKA G  VTVIS+S  K+ EA+++ GAD +LVS D  +
Sbjct: 185 DEPGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSFLVSRDQEQ 244

Query: 238 MQEAADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITG 297
           MQ AA +LD IIDTV A HPL P   LLK  GKLIL G    P++     ++ GRK + G
Sbjct: 245 MQAAAGTLDGIIDTVSAVHPLLPLFGLLKSHGKLILVGAPEKPLELPAFSLIAGRKIVAG 304

Query: 298 SFIGSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGSK 354
           S IG MKET+EM++F  +  +T+ IEVI  DY+N A ERL KNDVRYRFV+DV  + 
Sbjct: 305 SGIGGMKETQEMIDFAAKHNITADIEVISTDYLNTAMERLAKNDVRYRFVIDVGNTL 361

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 369

 Score =  562 bits (1450), Expect = 0.0
 Identities = 141/349 (40%), Positives = 212/349 (60%), Gaps = 5/349 (1%)

Query: 6   TERATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPM 65
                    A      L P   T R  G  DV I++ YCG+CH+D+HQ++++   + YP 
Sbjct: 19  AGLKIKAVGAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPC 78

Query: 66  VPGHEVVGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVY 125
           VPGHE+VG V  VG +V  +  GD VGVG +V  C++C  CE  +E YC+    +YN   
Sbjct: 79  VPGHEIVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPT 138

Query: 126 TDGK-PTQGGFAESMVVDQKFVVKIPDGMA-LEQAAPLLCAGVTVFSPLSHFGLKQSGLR 183
            D    T GG+++ +VV +++V++I      L   APLLCAG+T +SPL H+     G +
Sbjct: 139 PDEPGHTLGGYSQQIVVHERYVLRIRHPQEQLAAVAPLLCAGITTYSPLRHWQAGP-GKK 197

Query: 184 GGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAAD 243
            G++G+GG+GHMG+ +A AMG HV   ++S+ KR  A + LGAD+ + S +A  M     
Sbjct: 198 VGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAA-KALGADEVVNSRNADEMAAHLK 256

Query: 244 SLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPM-VMLGRKAITGSFIGS 302
           S D+I++TV A H L+ + +LLK DG + L G   TP +      +++ R+AI GS IG 
Sbjct: 257 SFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPATPHKSPEVFNLIMKRRAIAGSMIGG 316

Query: 303 MKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVA 351
           + ET+EML+FC E G+ + IE+I+ D +N+A+ER+ + DV+YRFV+D  
Sbjct: 317 IPETQEMLDFCAEHGIVADIEMIRADQINEAYERMLRGDVKYRFVIDNR 365

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} Length = 348

 Score =  554 bits (1429), Expect = 0.0
 Identities = 122/349 (34%), Positives = 201/349 (57%), Gaps = 12/349 (3%)

Query: 10  TIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGH 69
           + G+A         P+ ++    G  DV I +LY GICH+DIH   ++     YPM+PGH
Sbjct: 5   SKGFAIFSKDEHFKPHDFSRHAVGPRDVLIDILYAGICHSDIHSAYSEWKEGIYPMIPGH 64

Query: 70  EVVGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYN--DVYTD 127
           E+ G +KEVG  V  FK+GD VGVG  V  C+ C+PC+   EQ+C K +++Y+  D + D
Sbjct: 65  EIAGIIKEVGKGVKKFKIGDVVGVGCFVNSCKACKPCKEHQEQFCTKVVFTYDCLDSFHD 124

Query: 128 GKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGIL 187
            +P  GG++ ++VVD+ +V+ +     LE+ APLLCAG+T +SPL    + + G + G+ 
Sbjct: 125 NEPHMGGYSNNIVVDENYVISVDKNAPLEKVAPLLCAGITTYSPLKFSKVTK-GTKVGVA 183

Query: 188 GLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDY 247
           G GG+G M V  A AMG  V+V + ++ K+ +A+  +G   +         ++  + LD+
Sbjct: 184 GFGGLGSMAVKYAVAMGAEVSVFARNEHKKQDALS-MGVKHFYTD-----PKQCKEELDF 237

Query: 248 IIDTVPANHPLEPYLSLLKLDGKLILTGV---INTPMQFLTPMVMLGRKAITGSFIGSMK 304
           II T+P ++ L+ YL LL  +G L L G+      P+  +   + LG + + GS IG +K
Sbjct: 238 IISTIPTHYDLKDYLKLLTYNGDLALVGLPPVEVAPVLSVFDFIHLGNRKVYGSLIGGIK 297

Query: 305 ETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGS 353
           ET+EM++F  +  +   I++I    ++ A+  L     ++R+V+D+  S
Sbjct: 298 ETQEMVDFSIKHNIYPEIDLILGKDIDTAYHNLTHGKAKFRYVIDMKKS 346

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A Length = 360

 Score =  552 bits (1424), Expect = 0.0
 Identities = 123/352 (34%), Positives = 187/352 (53%), Gaps = 10/352 (2%)

Query: 6   TERATIGWAAKDPSGI--LSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNY 63
                 G A +            Y  +     D+ IK+  CG+C +DIH      G    
Sbjct: 3   YPEKFEGIAIQSHEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGNMKM 62

Query: 64  PMVPGHEVVGEVKEVGSEV-SNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYN 122
           P+V GHE+VG+V ++G +  S  KVG +VGVG  V  C  C  C+ D E YC K + +Y+
Sbjct: 63  PLVVGHEIVGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYS 122

Query: 123 DVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGL 182
             Y DG  +QGG+A  + V + FVV IP+ +    AAPLLC G+TV+SPL   G    G 
Sbjct: 123 QPYEDGYVSQGGYANYVRVHEHFVVPIPENIPSHLAAPLLCGGLTVYSPLVRNGCGP-GK 181

Query: 183 RGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSD-ATRMQEA 241
           + GI+GLGG+G MG LI+KAMG    VIS S +KR +AM+ +GAD Y+ + +     ++ 
Sbjct: 182 KVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKREDAMK-MGADHYIATLEEGDWGEKY 240

Query: 242 ADSLDYIIDTVPANHPLE--PYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSF 299
            D+ D I+    +   ++       +K+ G+++   +             L   +I+ S 
Sbjct: 241 FDTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQHEMLSLKPYGLKAVSISYSA 300

Query: 300 IGSMKETKEMLEFCREKGVTSMIEVIKMDY--VNKAFERLEKNDVRYRFVVD 349
           +GS+KE  ++L+   EK +   +E + +    V++AFER+EK DVRYRF + 
Sbjct: 301 LGSIKELNQLLKLVSEKDIKIWVETLPVGEAGVHEAFERMEKGDVRYRFTLV 352

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A Length = 339

 Score =  416 bits (1071), Expect = e-146
 Identities = 107/343 (31%), Positives = 167/343 (48%), Gaps = 13/343 (3%)

Query: 12  GWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGM-SNYPMVPGHE 70
               +     L             +V +++  CG+CHTD+H    D  +    P++PGHE
Sbjct: 3   AAVVEQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHE 62

Query: 71  VVGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKP 130
            VG V+EVG  V++ KVGD+VG+  L   C +C  C +  E  C  +  +       G  
Sbjct: 63  GVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNA-------GYS 115

Query: 131 TQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLG 190
             GG+AE       +VVKIPD ++ E+AAP+ CAGVT +  L   G K  G    I G+G
Sbjct: 116 VDGGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKALKVTGAKP-GEWVAIYGIG 174

Query: 191 GVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSD---ATRMQEAADSLDY 247
           G+GH+ V  AKAMG +V  +   D+K   A E LGAD  +       A  M+E    +  
Sbjct: 175 GLGHVAVQYAKAMGLNVVAVDIGDEKLELAKE-LGADLVVNPLKEDAAKFMKEKVGGVHA 233

Query: 248 IIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETK 307
            + T  +    +   + ++  G  +L G+    M       +L    I GS +G+ K+ +
Sbjct: 234 AVVTAVSKPAFQSAYNSIRRGGACVLVGLPPEEMPIPIFDTVLNGIKIIGSIVGTRKDLQ 293

Query: 308 EMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDV 350
           E L+F  E  V ++IEV  ++ +N+ F+R+ K  +  R V+ +
Sbjct: 294 EALQFAAEGKVKTIIEVQPLEKINEVFDRMLKGQINGRVVLTL 336

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} Length = 347

 Score =  415 bits (1068), Expect = e-146
 Identities = 94/349 (26%), Positives = 151/349 (43%), Gaps = 19/349 (5%)

Query: 12  GWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGM-SNYPMVPGHE 70
           G    +  G L      +    A ++ I V Y G+CHTD+H    D  +    P+V GHE
Sbjct: 8   GVIFYESHGKLEYKDIPVPKPKANELLINVKYSGVCHTDLHAWHGDWPLPVKLPLVGGHE 67

Query: 71  VVGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYC-NKKIWSYNDVYTDGK 129
             G V  +G  V  +K+GD  G+  L G C  C  CE   E  C +  +  Y        
Sbjct: 68  GAGVVVGMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADLSGYT------- 120

Query: 130 PTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGL 189
              G F +    D      IP G  L Q AP+LCAG+TV+  L    L   G    I G 
Sbjct: 121 -HDGSFQQYATADAVQAAHIPQGTDLAQVAPILCAGITVYKALKSANLMA-GHWVAISGA 178

Query: 190 -GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSD-----ATRMQEAAD 243
            GG+G + V  AKAMG+ V  I   + K       +G + ++  +         ++    
Sbjct: 179 AGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRS-IGGEVFIDFTKEKDIVGAVLKATDG 237

Query: 244 SLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVM-LGRKAITGSFIGS 302
               +I+   +   +E     ++ +G  +L G+              +   +I GS++G+
Sbjct: 238 GAHGVINVSVSEAAIEASTRYVRANGTTVLVGMPAGAKCCSDVFNQVVKSISIVGSYVGN 297

Query: 303 MKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVA 351
             +T+E L+F     V S I+V+ +  + + +E++EK  +  R+VVD +
Sbjct: 298 RADTREALDFFARGLVKSPIKVVGLSTLPEIYEKMEKGQIVGRYVVDTS 346

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* Length = 340

 Score =  405 bits (1044), Expect = e-142
 Identities = 103/342 (30%), Positives = 155/342 (45%), Gaps = 13/342 (3%)

Query: 14  AAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGM-SNYPMVPGHEVV 72
             +     L+     +   G   V +K+   G+CHTD+H    D  +    P +PGHE V
Sbjct: 7   VVRAFGAPLTIDEVPVPQPGPGQVQVKIEASGVCHTDLHAADGDWPVKPTLPFIPGHEGV 66

Query: 73  GEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQ 132
           G V  VGS VS  K GD+VGV  L   C  C  C    E  C K+  +       G    
Sbjct: 67  GYVSAVGSGVSRVKEGDRVGVPWLYSACGYCEHCLQGWETLCEKQQNT-------GYSVN 119

Query: 133 GGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGV 192
           GG+ E +V D  +V  +PD +   + AP+LCAGVTV+  L     +  G    I G+GG+
Sbjct: 120 GGYGEYVVADPNYVGLLPDKVGFVEIAPILCAGVTVYKGLKVTDTRP-GQWVVISGIGGL 178

Query: 193 GHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSD---ATRMQEAADSLDYII 249
           GH+ V  A+AMG  V  +   D K   A   LGA+  + + D   A  +Q+       ++
Sbjct: 179 GHVAVQYARAMGLRVAAVDIDDAKLNLARR-LGAEVAVNARDTDPAAWLQKEIGGAHGVL 237

Query: 250 DTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEM 309
            T  +       + +++  G + L G+           V+L    I GS +G+  + +E 
Sbjct: 238 VTAVSPKAFSQAIGMVRRGGTIALNGLPPGDFGTPIFDVVLKGITIRGSIVGTRSDLQES 297

Query: 310 LEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVA 351
           L+F     V + +   K+D VN  F RL +  V  R V+D +
Sbjct: 298 LDFAAHGDVKATVSTAKLDDVNDVFGRLREGKVEGRVVLDFS 339

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} Length = 344

 Score =  262 bits (671), Expect = 7e-86
 Identities = 89/331 (26%), Positives = 142/331 (42%), Gaps = 30/331 (9%)

Query: 33  GAEDVYIKVLYCGICHTDIHQIKNDLGMS--NYPMVPGHEVVGEVKEVGSEVSNFKVGDK 90
             E+V I++   G+C TD+   K          P++ GHE  G + EVG E++  K GD 
Sbjct: 27  QGEEVLIRIGGAGVCRTDLRVWKGVEAKQGFRLPIILGHENAGTIVEVG-ELAKVKKGDN 85

Query: 91  VGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIP 150
           V V    G    CR C       C  +I         G+ T GGF+E M+V     +   
Sbjct: 86  VVVYATWGDLT-CRYCREGKFNICKNQIIP-------GQTTNGGFSEYMLVKSSRWLVKL 137

Query: 151 DGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGG--------ILGLGGVGHMGVLIAKA 202
           + ++  +AAPL  AG T         ++Q+             + G+GG+    + I KA
Sbjct: 138 NSLSPVEAAPLADAGTTSMG-----AIRQALPFISKFAEPVVIVNGIGGLAVYTIQILKA 192

Query: 203 MGHHVTVI--SSSDKKRVEAMEHLGADQYLVSSDAT-RMQEAADSL--DYIIDTVPANHP 257
           +  ++T++  S S K R  A+E LGAD      DA   + +  D L     ID V     
Sbjct: 193 LMKNITIVGISRSKKHRDFALE-LGADYVSEMKDAESLINKLTDGLGASIAIDLVGTEET 251

Query: 258 LEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKG 317
                 LL  +G +IL G+    +        +  K + GS  GS+ + ++++       
Sbjct: 252 TYNLGKLLAQEGAIILVGMEGKRVSLEAFDTAVWNKKLLGSNYGSLNDLEDVVRLSESGK 311

Query: 318 VTSMIEVIKMDYVNKAFERLEKNDVRYRFVV 348
           +   I  + +D +NKAF  L++  V  R V+
Sbjct: 312 IKPYIIKVPLDDINKAFTNLDEGRVDGRQVI 342

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* Length = 347

 Score =  260 bits (667), Expect = 3e-85
 Identities = 84/336 (25%), Positives = 142/336 (42%), Gaps = 34/336 (10%)

Query: 33  GAEDVYIKVLYCGICHTDIHQIKNDLGMS--------NYPMVPGHEVVGEVKEVGSEVSN 84
               V IKV   G+CH+D+H  +   G            P+  GHE+ G+++EVG EV  
Sbjct: 24  KGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDEVVG 83

Query: 85  FKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQK 144
           +  GD V V    G    C  C    E  C+   W        G    G +AE ++V   
Sbjct: 84  YSKGDLVAVNPWQGEGN-CYYCRIGEEHLCDSPRWL-------GINFDGAYAEYVIVPHY 135

Query: 145 FVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGG----ILG-LGGVGHMGVLI 199
             +     +   +AAPL C+G+T +       ++++ L       ++G  GG+G M V I
Sbjct: 136 KYMYKLRRLNAVEAAPLTCSGITTYR-----AVRKASLDPTKTLLVVGAGGGLGTMAVQI 190

Query: 200 AKAM-GHHVTVISSSDKKRVEAMEHLGADQYLVSSD---ATRMQEAADSL--DYIIDTVP 253
           AKA+ G  +  +   ++    A    GAD  + +S       ++   +S   D +ID   
Sbjct: 191 AKAVSGATIIGVDVREEAVEAAKR-AGADYVINASMQDPLAEIRRITESKGVDAVIDLNN 249

Query: 254 ANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFC 313
           +   L  Y   L   GK ++ G+    + +  P++ L      GS +G+  +   ++   
Sbjct: 250 SEKTLSVYPKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFVGSLVGNQSDFLGIMRLA 309

Query: 314 REKGVTSMI-EVIKMDYVNKAFERLEKNDVRYRFVV 348
               V  MI + +K++  N+A + LE      R V+
Sbjct: 310 EAGKVKPMITKTMKLEEANEAIDNLENFKAIGRQVL 345

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 Length = 359

 Score =  258 bits (661), Expect = 4e-84
 Identities = 91/334 (27%), Positives = 151/334 (45%), Gaps = 32/334 (9%)

Query: 32  TGAEDVYIKVLYCGICHTDIHQIKNDLGMS---NYPMVPGHEVVGEVKEVGSEVSNFKVG 88
            G  DV +++   G+CHTD+H ++           P   GHE VG ++EV   V   + G
Sbjct: 39  EGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEEVAEGVEGLEKG 98

Query: 89  DKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVK 148
           D V +   V     C  C A  + +C    +        G    GGFAE M    + V+K
Sbjct: 99  DPVILHPAVT-DGTCLACRAGEDMHCENLEFP-------GLNIDGGFAEFMRTSHRSVIK 150

Query: 149 IPDGMALE---QAAPLLCAGVTVFSPLSHFGLKQSG--LRGG----ILGLGGVGHMGVLI 199
           +P  ++ E   + APL  AG+T +       +K++   L  G    I+G+GG+GH+ V +
Sbjct: 151 LPKDISREKLVEMAPLADAGITAYR-----AVKKAARTLYPGAYVAIVGVGGLGHIAVQL 205

Query: 200 AKAMGH-HVTVISSSDKKRVEAMEHLGADQYLVSSD--ATRMQEAADSL--DYIIDTVPA 254
            K M    V  +   ++K   A   LGAD  + +      ++ E       +  +D V +
Sbjct: 206 LKVMTPATVIALDVKEEKLKLAER-LGADHVVDARRDPVKQVMELTRGRGVNVAMDFVGS 264

Query: 255 NHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCR 314
              ++    LL   G+LI+ G     ++F T  V+    +  GS +G+  E  E++    
Sbjct: 265 QATVDYTPYLLGRMGRLIIVG-YGGELRFPTIRVISSEVSFEGSLVGNYVELHELVTLAL 323

Query: 315 EKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVV 348
           +  V   +++ K+D +N   ERLEK +V  R V+
Sbjct: 324 QGKVRVEVDIHKLDEINDVLERLEKGEVLGRAVL 357

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A* Length = 345

 Score =  254 bits (652), Expect = 6e-83
 Identities = 84/329 (25%), Positives = 140/329 (42%), Gaps = 22/329 (6%)

Query: 33  GAEDVYIKVLYCGICHTDIHQIKNDLGMSN--YPMVPGHEVVGEVKEVGSEVSNFKVGDK 90
           G  ++ +KV   G+CH+DI  +           P+  GHE VG V E+G  V+ F VGD 
Sbjct: 24  GPGEILLKVTAAGLCHSDIFVMDMPAAQYAYGLPLTLGHEGVGTVAELGEGVTGFGVGDA 83

Query: 91  VGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIP 150
           V V    GC   C  C    E YC +       +   G  + G  AE M+VD    +   
Sbjct: 84  VAVYGPWGC-GACHACARGRENYCTRAADL--GITPPGLGSPGSMAEYMIVDSARHLVPI 140

Query: 151 DGMALEQAAPLLCAGVTVFSPLSHFGLKQS--GLRGG----ILGLGGVGHMGVLIAKAMG 204
             +    AAPL  AG+T +       + +    L  G    ++G+GG+GH+G+ I +A+ 
Sbjct: 141 GDLDPVAAAPLTDAGLTPYH-----AISRVLPLLGPGSTAVVIGVGGLGHVGIQILRAVS 195

Query: 205 H-HVTVISSSDKKRVEAMEHLGADQYLVSSD--ATRMQEAADSL--DYIIDTVPANHPLE 259
              V  +   D +   A E +GAD  + S    A  ++E         + D V A   ++
Sbjct: 196 AARVIAVDLDDDRLALARE-VGADAAVKSGAGAADAIRELTGGQGATAVFDFVGAQSTID 254

Query: 260 PYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVT 319
               ++ +DG + + G+       +   ++    ++   + G+  E  E++   R   + 
Sbjct: 255 TAQQVVAVDGHISVVGIHAGAHAKVGFFMIPFGASVVTPYWGTRSELMEVVALARAGRLD 314

Query: 320 SMIEVIKMDYVNKAFERLEKNDVRYRFVV 348
              E   +D    A+ RL +  +R R VV
Sbjct: 315 IHTETFTLDEGPAAYRRLREGSIRGRGVV 343

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} Length = 343

 Score =  175 bits (447), Expect = 3e-52
 Identities = 71/333 (21%), Positives = 126/333 (37%), Gaps = 29/333 (8%)

Query: 33  GAEDVYIKVLYCGICHTDIHQIKNDLGMS-NYPMVPGHEVVGEVKEVGSEVSNFKVGDKV 91
           G ++V +++    + H D+   K         P V G +  G V  VG  V  F  GD+V
Sbjct: 26  GPKEVRVRLKAAALNHLDVWVRKGVASPKLPLPHVLGADGSGVVDAVGPGVEGFAPGDEV 85

Query: 92  GVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPD 151
            V      C  C  C A  +  C             G+   G +AE +V+ +  +   P 
Sbjct: 86  -VINPGLSCGRCERCLAGEDNLCP-------RYQILGEHRHGTYAEYVVLPEANLAPKPK 137

Query: 152 GMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGG----ILG-LGGVGHMGVLIAKAMGHH 206
            ++ E+AA +    +T +  +        G+R G    ++    GV    + IAK  G  
Sbjct: 138 NLSFEEAAAIPLTFLTAWQMVVDKL----GVRPGDDVLVMAAGSGVSVAAIQIAKLFGAR 193

Query: 207 VTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSL------DYIIDTVPANHPLEP 260
           V   + S+ K     + LGAD   V+       +    L      D ++D   A +  E 
Sbjct: 194 VIATAGSEDKL-RRAKALGAD-ETVNYTHPDWPKEVRRLTGGKGADKVVDHTGALY-FEG 250

Query: 261 YLSLLKLDGKLILTGVIN-TPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVT 319
            +      G++ + G  +          V   + +I GS + S      +L F  E  + 
Sbjct: 251 VIKATANGGRIAIAGASSGYEGTLPFAHVFYRQLSILGSTMASKSRLFPILRFVEEGKLK 310

Query: 320 SMI-EVIKMDYVNKAFERLEKNDVRYRFVVDVA 351
            ++ +V+ ++   +    LE+  V  + V+ V 
Sbjct: 311 PVVGQVLPLEAAAEGHRLLEERRVFGKVVLQVG 343

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1 Length = 380

 Score =  176 bits (448), Expect = 4e-52
 Identities = 74/331 (22%), Positives = 141/331 (42%), Gaps = 27/331 (8%)

Query: 33  GAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSN-----FKV 87
               + +++L  G+C +D+H  + +      P++ GHE  G V EV  E  +      K 
Sbjct: 41  PRGSILVEILSAGVCGSDVHMFRGEDPRVPLPIILGHEGAGRVVEVNGEKRDLNGELLKP 100

Query: 88  GDKVGVGVLVGCCRNCRPCEADVEQYC--NKKIWSYNDVYTDGKPTQGGFAESMVVD-QK 144
           GD + V      C  C  C+   E Y   N+K++  N   ++    +G ++  +V+D + 
Sbjct: 101 GDLI-VWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPHLRGCYSSHIVLDPET 159

Query: 145 FVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMG 204
            V+K+ +   L+  A  +C+G T +     +    +G    I G G +G  GV+IA+++G
Sbjct: 160 DVLKVSEKDDLDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLG 219

Query: 205 -HHVTVISSSDKKRVEAMEHLGADQYLVSSDATR--MQEAADSL------DYIIDTVPAN 255
             +V VI+ S  +   A E +GAD  L   + +    ++A   +      D+I++    +
Sbjct: 220 AENVIVIAGSPNRLKLAEE-IGADLTLNRRETSVEERRKAIMDITHGRGADFILEATGDS 278

Query: 256 HPLEPYLSLLKLDGKLILTGVIN----TPMQFLTPMVMLGRKAITGSFIGSMKETKEMLE 311
             L     LL+  G   + GV       P +    +V+       G ++       + + 
Sbjct: 279 RALLEGSELLRRGGFYSVAGVAVPQDPVPFKVYEWLVLKNA-TFKGIWVSDTSHFVKTVS 337

Query: 312 FCREKG--VTSMI-EVIKMDYVNKAFERLEK 339
                   ++ +I   + +   NKA E +E 
Sbjct: 338 ITSRNYQLLSKLITHRLPLKEANKALELMES 368

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* Length = 370

 Score =  170 bits (434), Expect = 4e-50
 Identities = 78/327 (23%), Positives = 125/327 (38%), Gaps = 40/327 (12%)

Query: 33  GAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVG 92
           G +D+ +KV  CGIC TD H +  +   S  P+  GHE  G V E GS V +   G ++ 
Sbjct: 46  GPDDLLVKVEACGICGTDRHLLHGEFP-STPPVTLGHEFCGIVVEAGSAVRDIAPGARIT 104

Query: 93  VGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDG 152
               +  C  C  C+A     C        ++   G    GGFAE ++V +K   +IP  
Sbjct: 105 GDPNIS-CGRCPQCQAGRVNLC-------RNLRAIGIHRDGGFAEYVLVPRKQAFEIPLT 156

Query: 153 MALEQAA---PLLCAGVTVFSPLSHFGLKQSGLRGG----ILGLGGVGHMGVLIAKAMG- 204
           +     A   PL C          H G+  SG++ G    ILG G +G + V +A+  G 
Sbjct: 157 LDPVHGAFCEPLACC--------LH-GVDLSGIKAGSTVAILGGGVIGLLTVQLARLAGA 207

Query: 205 HHVTVISSSDKKRVEAMEHLGADQYLVSSD---ATRMQEAADSL----DYIIDTVPANHP 257
             V + +    KR  A E +GA   +  S       +      +    D +I+       
Sbjct: 208 TTVILSTRQATKRRLAEE-VGATATVDPSAGDVVEAIAGPVGLVPGGVDVVIECAGVAET 266

Query: 258 LEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRK--AITGSFIGSMKETKEMLEFCRE 315
           ++    L K  G +++ GV+    +       +  +   + GSFI      +   +    
Sbjct: 267 VKQSTRLAKAGGTVVILGVLPQGEKVEIEPFDILFRELRVLGSFINPF-VHRRAADLVAT 325

Query: 316 KG--VTSMI-EVIKMDYVNKAFERLEK 339
               +  MI   I +D           
Sbjct: 326 GAIEIDRMISRRISLDEAPDVISNPAA 352

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} Length = 363

 Score =  166 bits (422), Expect = 2e-48
 Identities = 74/320 (23%), Positives = 133/320 (41%), Gaps = 31/320 (9%)

Query: 33  GAEDVYIKVLYCGICHTDIHQIKNDLGMS-NYPMVPGHEVVGEVKEVGSEVSNFKVGDKV 91
           G  D+ ++ L   + + D   ++  +G+   +P VP  ++ G V+ VG  V+ F+ GD+V
Sbjct: 52  GEHDIIVRTLAVSLNYRDKLVLETGMGLDLAFPFVPASDMSGVVEAVGKSVTRFRPGDRV 111

Query: 92  GVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPD 151
            +        +                       T G    G  +E +V+ + + V  P 
Sbjct: 112 -ISTFAPGWLDGLRPGTGRT----------PAYETLGGAHPGVLSEYVVLPEGWFVAAPK 160

Query: 152 GMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGG----ILGLGGVGHMGVLIAKAMGHHV 207
            +   +A+ L CAG+T +  L   G     LR G    + G GGV   G+ IAKA G  V
Sbjct: 161 SLDAAEASTLPCAGLTAWFALVEKG----HLRAGDRVVVQGTGGVALFGLQIAKATGAEV 216

Query: 208 TVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSL------DYIIDTVPANHPLEPY 261
            V SSS +K  +    LGAD + ++       E   +L      D+I++       L   
Sbjct: 217 IVTSSSREKL-DRAFALGAD-HGINRLEEDWVERVYALTGDRGADHILEIAGGAG-LGQS 273

Query: 262 LSLLKLDGKLILTGVIN-TPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTS 320
           L  +  DG++ + GV+    +      ++L    + G  +G  +  ++++      G+  
Sbjct: 274 LKAVAPDGRISVIGVLEGFEVSGPVGPLLLKSPVVQGISVGHRRALEDLVGAVDRLGLKP 333

Query: 321 MI-EVIKMDYVNKAFERLEK 339
           +I    K   V +A   L++
Sbjct: 334 VIDMRYKFTEVPEALAHLDR 353

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli} Length = 346

 Score =  164 bits (417), Expect = 7e-48
 Identities = 75/332 (22%), Positives = 125/332 (37%), Gaps = 43/332 (12%)

Query: 33  GAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVG 92
             ++V +K+   G+C +D+ +I  + G   YP+  GHE  G +  VGS V +   GD V 
Sbjct: 24  HQDEVRVKIASSGLCGSDLPRIFKN-GAHYYPITLGHEFSGYIDAVGSGVDDLHPGDAVA 82

Query: 93  VGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDG 152
              L+  C  C  C       C             G    GGFAE +VV +K V  +P  
Sbjct: 83  CVPLLP-CFTCPECLKGFYSQC-------AKYDFIGSRRDGGFAEYIVVKRKNVFALPTD 134

Query: 153 MALEQAA---PLLCAGVTVFSPLSHFGLKQSGLRGG----ILGLGGVGHMGVLIAKAMG- 204
           M +E  A   P+            H     +         I+G G +G + +  A A+G 
Sbjct: 135 MPIEDGAFIEPITVG--------LH-AFHLAQGCENKNVIIIGAGTIGLLAIQCAVALGA 185

Query: 205 HHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSL-----DYIIDTVPANHPLE 259
             VT I  S +K   A    GA Q   SS+ +  Q  +          I++T      +E
Sbjct: 186 KSVTAIDISSEKLALAKS-FGAMQTFNSSEMSAPQMQSVLRELRFNQLILETAGVPQTVE 244

Query: 260 PYLSLLKLDGKLILTGVINTPMQF-LTPMVMLGRK--AITGSFIGS-----MKETKEMLE 311
             + +     +L L G ++  +         + RK   + GS++        +E +    
Sbjct: 245 LAVEIAGPHAQLALVGTLHQDLHLTSATFGKILRKELTVIGSWMNYSSPWPGQEWETASR 304

Query: 312 FCREKG--VTSMI-EVIKMDYVNKAFERLEKN 340
              E+   +  +I      +   +A   + +N
Sbjct: 305 LLTERKLSLEPLIAHRGSFESFAQAVRDIARN 336

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* Length = 366

 Score =  164 bits (416), Expect = 1e-47
 Identities = 67/340 (19%), Positives = 121/340 (35%), Gaps = 40/340 (11%)

Query: 33  GAEDVYIKVLYCGICHTDIHQIKNDLGMSNYP-----MVPGHEVVGEVKEVGSEVSNFKV 87
               + I+ +Y GIC  D   +   L +S  P     +V GHE +G V+E       F  
Sbjct: 25  SYGKIKIRTIYNGICGADREIVNGKLTLSTLPKGKDFLVLGHEAIGVVEES---YHGFSQ 81

Query: 88  GDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVV 147
           GD V      G C  CR C      +C    +    ++       G   E    D K++V
Sbjct: 82  GDLVMPVNRRG-CGICRNCLVGRPDFCETGEFGEAGIH----KMDGFMREWWYDDPKYLV 136

Query: 148 KIPDGMALEQAA---PLLCAGVTV-----FSPLSHFGLKQSGLRGG----ILGLGGVGHM 195
           KIP  +  +      PL     ++                 G        ++G G +G +
Sbjct: 137 KIPKSIE-DIGILAQPLADIEKSIEEILEVQKRVPVWTCDDGTLNCRKVLVVGTGPIGVL 195

Query: 196 GVLIAKAMGHHVTVISSSDKKRVEA--MEHLGADQYLVSSDATRMQEAADSLDYIIDTVP 253
             L+ +  G  V + +  +   VE   +E    + Y  S+   +++++    D IID   
Sbjct: 196 FTLLFRTYGLEVWMANRREPTEVEQTVIEETKTNYYNSSNGYDKLKDSVGKFDVIIDATG 255

Query: 254 AN-HPLEPYLSLLKLDGKLILTGV---INTPMQFLTPM-VMLGRKAITGSFIGSMKETKE 308
           A+ + L   + LL  +G L L G     + P+ + T   ++   K I G   G     ++
Sbjct: 256 ADVNILGNVIPLLGRNGVLGLFGFSTSGSVPLDYKTLQEIVHTNKTIIGLVNGQKPHFQQ 315

Query: 309 MLEFCREKGVTSMIEV-------IKMDYVNKAFERLEKND 341
            +                     + ++   +  + L + +
Sbjct: 316 AVVHLASWKTLYPKAAKMLITKTVSINDEKELLKVLREKE 355

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* Length = 348

 Score =  160 bits (408), Expect = 2e-46
 Identities = 89/332 (26%), Positives = 132/332 (39%), Gaps = 43/332 (12%)

Query: 33  GAEDVYIKVLYCGICHTDIHQIKNDLGMS---NYPMVPGHEVVGEVKEVGSEVSNFKVGD 89
           G  +V IKVL   IC TD+H  + +         P + GHEV GEV E+G  V   +VGD
Sbjct: 28  GPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIMGHEVAGEVVEIGPGVEGIEVGD 87

Query: 90  KVGVGVLVGCCRNCRPCEADVEQYC-NKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVK 148
            V V   +  C  C  C       C N KI+        G  T G FAE  VV  + + K
Sbjct: 88  YVSVETHIV-CGKCYACRRGQYHVCQNTKIF--------GVDTDGVFAEYAVVPAQNIWK 138

Query: 149 IPDGMALEQAA---PLLCAGVTVFSPLSHFGLKQSGLRGG----ILGLGGVGHMGVLIAK 201
            P  +  E A    PL  A  TV           +G   G    I G G +G +G+ +AK
Sbjct: 139 NPKSIPPEYATLQEPLGNAVDTV----------LAGPISGKSVLITGAGPLGLLGIAVAK 188

Query: 202 AMG-HHVTVISSSDKKRVEAMEHLGADQYLVSSD---ATRMQEAADSL--DYIIDTVPAN 255
           A G + V V   SD +R  A + +GAD  +   +      + +  D    D  ++   A 
Sbjct: 189 ASGAYPVIVSEPSDFRRELAKK-VGADYVINPFEEDVVKEVMDITDGNGVDVFLEFSGAP 247

Query: 256 HPLEPYLSLLKLDGKLILTGVINTPMQF-LTPMVMLGRKAITGSFIGSMKET-KEMLEFC 313
             LE  L  +   G++ L G+    +      +++     I G     + ET   +    
Sbjct: 248 KALEQGLQAVTPAGRVSLLGLYPGKVTIDFNNLIIFKALTIYGITGRHLWETWYTVSRLL 307

Query: 314 REKG--VTSMI--EVIKMDYVNKAFERLEKND 341
           +     +  +I  +    D   +AFE +    
Sbjct: 308 QSGKLNLDPIITHKYKGFDKYEEAFELMRAGK 339

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A Length = 456

 Score =  155 bits (393), Expect = 1e-43
 Identities = 56/365 (15%), Positives = 119/365 (32%), Gaps = 59/365 (16%)

Query: 33  GAEDVYIKVLYCGICHTDIHQIKNDLGMSNY------------------PMVPGHEVVGE 74
           G  +  + V+   + +  +H    +   +                      V G ++ G 
Sbjct: 69  GPGEALVAVMASSVNYNSVHTSIFEPLSTFGFLERYGRVSDLAKRHDLPYHVIGSDLAGV 128

Query: 75  VKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGG 134
           V   G  V+ ++ GD+V V   +           D      ++IW +   +       GG
Sbjct: 129 VLRTGPGVNAWQAGDEV-VAHCLSVELESSDGHNDTMLDPEQRIWGFETNF-------GG 180

Query: 135 FAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGG----ILGL- 189
            AE  +V    ++  PD ++ E+AA       T +  L       +G++ G    I G  
Sbjct: 181 LAEIALVKSNQLMPKPDHLSWEEAAAPGLVNSTAYRQL--VSRNGAGMKQGDNVLIWGAS 238

Query: 190 GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSL---- 245
           GG+G      A A G +   + SS +K       +GA+  +  +         ++     
Sbjct: 239 GGLGSYATQFALAGGANPICVVSSPQKAEICRA-MGAEAIIDRNAEGYRFWKDENTQDPK 297

Query: 246 ------------------DYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPM-QFLTP 286
                             D + +           + + +  G +      +  M ++   
Sbjct: 298 EWKRFGKRIRELTGGEDIDIVFEHPGRET-FGASVFVTRKGGTITTCASTSGYMHEYDNR 356

Query: 287 MVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMI-EVIKMDYVNKAFERLEKNDVRYR 345
            + +  K I GS   + +E  E      +  +   + +V  ++   +A   + +N  + +
Sbjct: 357 YLWMSLKRIIGSHFANYREAWEANRLIAKGRIHPTLSKVYSLEDTGQAAYDVHRNLHQGK 416

Query: 346 FVVDV 350
             V  
Sbjct: 417 VGVLC 421

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* Length = 343

 Score =  151 bits (385), Expect = 3e-43
 Identities = 66/329 (20%), Positives = 118/329 (35%), Gaps = 39/329 (11%)

Query: 33  GAEDVYIKVLYCGICHTDIHQIKNDLGMS---NYPMVPGHEVVGEVKEVGSEVSNFKVGD 89
           G  ++ ++V    IC TD+H  K D         P+V GHE  G V+ VG  V   +VGD
Sbjct: 24  GPGEILVRVEAASICGTDLHIWKWDAWARGRIRPPLVTGHEFSGVVEAVGPGVRRPQVGD 83

Query: 90  KVGV-GVLVGCCRNCRPCEADVEQYC-NKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVV 147
            V +   +V  C  C  C       C N +I         G    GGFAE +VV  +   
Sbjct: 84  HVSLESHIV--CHACPACRTGNYHVCLNTQIL--------GVDRDGGFAEYVVVPAENAW 133

Query: 148 KIPDGMALEQAAPLLCAGVTVFSPLS---HFGLKQSGLRGG----ILGLGGVGHMGVLIA 200
             P  +  E AA        +  P     H  +       G    I G G +G M  ++ 
Sbjct: 134 VNPKDLPFEVAA--------ILEPFGNAVH-TVYAGSGVSGKSVLITGAGPIGLMAAMVV 184

Query: 201 KAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSD--ATRMQEAA-DSLDYIIDTVPANHP 257
           +A G    ++S  +  R+               +     ++      ++ +++       
Sbjct: 185 RASGAGPILVSDPNPYRLAFARPYADRLVNPLEEDLLEVVRRVTGSGVEVLLEFSGNEAA 244

Query: 258 LEPYLSLLKLDGKLILTGVINTPMQF-LTPMVMLGRKAITGSFIGSMKET-KEMLEFCRE 315
           +   L  L   G+  + G+ + P++F L   +++      G     + +T  +       
Sbjct: 245 IHQGLMALIPGGEARILGIPSDPIRFDLAGELVMRGITAFGIAGRRLWQTWMQGTALVYS 304

Query: 316 KG--VTSMI-EVIKMDYVNKAFERLEKND 341
               ++ ++   + +    +AF  L    
Sbjct: 305 GRVDLSPLLTHRLPLSRYREAFGLLASGQ 333

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A Length = 447

 Score =  152 bits (386), Expect = 2e-42
 Identities = 55/365 (15%), Positives = 107/365 (29%), Gaps = 59/365 (16%)

Query: 33  GAEDVYIKVLYCGICHTDIHQIKNDLGMSNY------------------PMVPGHEVVGE 74
             ++V + V+   I +  +     +   + +                    V G +  G 
Sbjct: 61  APDEVLVAVMASSINYNTVWSAMFEPIPTFHFLKQNARQGGWATRHDQPYHVLGSDCSGV 120

Query: 75  VKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGG 134
           V   G  V  +K GD V     +    +    E                     +   GG
Sbjct: 121 VVRTGIGVRRWKPGDHV-----IVHPAHVDEQEPATHGDGM---LGTEQRAWGFETNFGG 172

Query: 135 FAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGG----ILGL- 189
            AE  VV    ++  P  +  E+AA       T +  L     + + ++ G    I G  
Sbjct: 173 LAEYGVVRASQLLPKPAHLTWEEAAVSPLCAGTAYRML--VSDRGAQMKQGDIVLIWGAS 230

Query: 190 GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSL---- 245
           GG+G   +   K  G     + SS +K       LG D  +  ++     + AD      
Sbjct: 231 GGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRA-LGCDLVINRAELGITDDIADDPRRVV 289

Query: 246 ------------------DYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPM-QFLTP 286
                             D + +           + + +  G ++  G  +  +  F   
Sbjct: 290 ETGRKLAKLVVEKAGREPDIVFEHTGRVT-FGLSVIVARRGGTVVTCGSSSGYLHTFDNR 348

Query: 287 MVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMI-EVIKMDYVNKAFERLEKNDVRYR 345
            + +  K I GS   + +E +          V   +  V  +    +A   ++ +    +
Sbjct: 349 YLWMKLKKIVGSHGANHEEQQATNRLFESGAVVPAMSAVYPLAEAAEACRVVQTSRQVGK 408

Query: 346 FVVDV 350
             V  
Sbjct: 409 VAVLC 413

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} Length = 404

 Score =  147 bits (374), Expect = 4e-41
 Identities = 75/351 (21%), Positives = 132/351 (37%), Gaps = 59/351 (16%)

Query: 33  GAEDVYIKVLYCGICHTDIHQIKND-------LGMSNYPMVPGHEVVGEVKEVGSEV--- 82
              ++ IKV  CGIC +D+H  + D        G++ +P+  GHE  G V E G E    
Sbjct: 54  KPTEIIIKVKACGICGSDVHMAQTDEEGYILYPGLTGFPVTLGHEFSGVVVEAGPEAINR 113

Query: 83  ---SNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESM 139
                F++G+ V    ++  C +CRPC      +C             G    G FAE +
Sbjct: 114 RTNKRFEIGEPVCAEEMLW-CGHCRPCAEGFPNHCENLNEL-------GFNVDGAFAEYV 165

Query: 140 VVDQKFVVKIPDG-------MALEQAA---PLLCAGVTVFSPLSHFGLKQSGLRGG---- 185
            VD K+   + +              +   P   A   V        ++  G+R G    
Sbjct: 166 KVDAKYAWSLRELEGVYEGDRLFLAGSLVEPTSVAYNAVI-------VRGGGIRPGDNVV 218

Query: 186 ILGLGGVGHMGVLIAKAMG-HHVTVISSSDKKRVEAMEHLGADQYLVSSD---ATRMQEA 241
           ILG G +G   V I K  G   V +   S+ +R  A E LGAD  +  +       + + 
Sbjct: 219 ILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKE-LGADHVIDPTKENFVEAVLDY 277

Query: 242 ADSL--DYIIDTVPANHPLEPYLSLLKLDGK-----LILTGVINTPMQFLTPMVMLGRKA 294
            + L     ++       + P +  +    +     + +    +  +     +  + R  
Sbjct: 278 TNGLGAKLFLEATGVPQLVWPQIEEVIWRARGINATVAIVARADAKIPLTGEVFQVRRAQ 337

Query: 295 ITGSFIGSMKET-KEMLEFCREKG--VTSMI-EVIKMDYVNKAFERLEKND 341
           I GS   S   T   ++      G  +T +I + + M+ + +  +RL+ + 
Sbjct: 338 IVGSQGHSGHGTFPRVISLM-ASGMDMTKIISKTVSMEEIPEYIKRLQTDK 387

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* Length = 357

 Score =  145 bits (369), Expect = 8e-41
 Identities = 55/329 (16%), Positives = 104/329 (31%), Gaps = 34/329 (10%)

Query: 33  GAEDVYIKVLYCGICHTDIHQIKNDLGMS---NYPMVPGHEVVGEVKEVGSEVSNFKVGD 89
            + +  ++ L  G+C TD   I    G        +V GHE VG V  V    +  + GD
Sbjct: 24  ESGEALVRTLRVGVCGTDHEVIAGGHGGFPEGEDHLVLGHEAVGVV--VDPNDTELEEGD 81

Query: 90  KVGVGVLVGC-CRNCRPCEADVEQYC-NKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVV 147
            V   V            E D      +   +             G  +E     +K++V
Sbjct: 82  IVVPTVRRPPASGTNEYFERDQPDMAPDGMYFE-----RGIVGAHGYMSEFFTSPEKYLV 136

Query: 148 KIPDGMALEQAA---PLLCA--GVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKA 202
           +IP   A E      P+      +   +  S            +LG G +G + + + K 
Sbjct: 137 RIPRSQA-ELGFLIEPISITEKALEH-AYASRSAFDWDPSSAFVLGNGSLGLLTLAMLKV 194

Query: 203 MG---HHVTVISSSD--KKRVEAMEHLGADQYLVSSDAT-RMQEAADSLDYIIDTVPANH 256
                 ++  +   D     ++ +E L A            + +  + +D+I +      
Sbjct: 195 DDKGYENLYCLGRRDRPDPTIDIIEELDATYVDSRQTPVEDVPDVYEQMDFIYEATGFPK 254

Query: 257 PLEPYLSLLKLDGKLILTGV-----INTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLE 311
                +  L  +G   L GV                ++L  KA+ GS    ++  +    
Sbjct: 255 HAIQSVQALAPNGVGALLGVPSDWAFEVDAGAFHREMVLHNKALVGSVNSHVEHFEAATV 314

Query: 312 FCREKG---VTSMI-EVIKMDYVNKAFER 336
              +     +  ++  V  +     AF+ 
Sbjct: 315 TFTKLPKWFLEDLVTGVHPLSEFEAAFDD 343

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 Length = 352

 Score =  143 bits (362), Expect = 8e-40
 Identities = 79/336 (23%), Positives = 132/336 (39%), Gaps = 52/336 (15%)

Query: 33  GAEDVYIKVLYCGICHTDIHQIKN-DLGMS--NYPMVPGHEVVGEVKEVGSEVSNFKVGD 89
             ++V +++ Y GIC +D+H  ++  +       PMV GHE  G V +VG  V + K GD
Sbjct: 27  KEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNVKHLKKGD 86

Query: 90  KVGVGVLVGCCRNCRPCEADVEQYC-NKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVK 148
           +V V   V  CR C+ C+      C +    +         P  G  A   V    F  K
Sbjct: 87  RVAVEPGVP-CRRCQFCKEGKYNLCPDLTFCAT-------PPDDGNLARYYVHAADFCHK 138

Query: 149 IPDGMALEQAA---PLLCAGVTVFSPLSHFGLKQSGLRGG----ILGLGGVGHMGVLIAK 201
           +PD ++LE+ A   PL                +++G++ G    ++G G +G + VL AK
Sbjct: 139 LPDNVSLEEGALLEPLSVG---------VHACRRAGVQLGTTVLVIGAGPIGLVSVLAAK 189

Query: 202 AMGHHVTVISSSDKKRVEAMEHLGADQ-YLVSSDATRMQEAADSL--------DYIIDTV 252
           A G  V   + S ++   A    GAD   +V           + +        +  ID  
Sbjct: 190 AYGAFVVCTARSPRRLEVAKN-CGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTIDCS 248

Query: 253 PANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRK--AITGSF--IGSMKETKE 308
                +   +++ +  G L+L G+ +  +    P+V    +   I   F          E
Sbjct: 249 GNEKCITIGINITRTGGTLMLVGMGSQMVTV--PLVNACAREIDIKSVFRYCNDYPIALE 306

Query: 309 MLEFCREKG---VTSMI-EVIKMDYVNKAFERLEKN 340
           M+      G   V  ++    K++    AFE   K 
Sbjct: 307 MV----ASGRCNVKQLVTHSFKLEQTVDAFEAARKK 338

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A Length = 356

 Score =  140 bits (355), Expect = 9e-39
 Identities = 67/288 (23%), Positives = 115/288 (39%), Gaps = 41/288 (14%)

Query: 33  GAEDVYIKVLYCGICHTDIHQIKNDLGMSNY----PMVPGHEVVGEVKEVGSEVSNFKVG 88
           G  +V +++   GIC +D+H       + N+    PMV GHE  G V++VGS V + K G
Sbjct: 30  GPNEVLLRMHSVGICGSDVH-YWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSVKHLKPG 88

Query: 89  DKVGVGVLVGCCRNCRPCEADVEQYC-NKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVV 147
           D+V +        N   C+        +    +         P  G        +  F  
Sbjct: 89  DRVAIEPGAP-RENDEFCKMGRYNLSPSIFFCATP-------PDDGNLCRFYKHNAAFCY 140

Query: 148 KIPDGMALEQAA---PLLCAGVTVFSPLSHFGLKQSGLRGG----ILGLGGVGHMGVLIA 200
           K+PD +  E+ A   PL    V +     H   ++ G+  G    + G G +G + +L+A
Sbjct: 141 KLPDNVTFEEGALIEPL---SVGI-----H-ACRRGGVTLGHKVLVCGAGPIGMVTLLVA 191

Query: 201 KAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAA-------DSLDYIIDTVP 253
           KAMG    V++     R+   + +GAD  L  S  +  + A           +  I+   
Sbjct: 192 KAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIECTG 251

Query: 254 ANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRK--AITGSF 299
           A   ++  +   +  G L+L G+ +       P++    +   I G F
Sbjct: 252 AEASIQAGIYATRSGGTLVLVGLGSEMTTV--PLLHAAIREVDIKGVF 297

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} Length = 363

 Score =  138 bits (349), Expect = 6e-38
 Identities = 73/334 (21%), Positives = 123/334 (36%), Gaps = 48/334 (14%)

Query: 33  GAEDVYIKVLYCGICHTDIHQIKND-LGMS--NYPMVPGHEVVGEVKEVGSEVSNFKVGD 89
              +V + V   GIC +D+H  K+  +G        V GHE  GEV  V   V + KVGD
Sbjct: 39  KEGEVTVAVRSTGICGSDVHFWKHGCIGPMIVECDHVLGHESAGEVIAVHPSVKSIKVGD 98

Query: 90  KVGVGVLVGCCRNCRPCEADVEQYC-NKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVK 148
           +V +   V  C  C PC       C      S         P  G     +     +  K
Sbjct: 99  RVAIEPQVI-CNACEPCLTGRYNGCERVDFLSTP-------PVPGLLRRYVNHPAVWCHK 150

Query: 149 IPDGMALEQAAPLLCAGVTVFSPLS---HFGLKQSGLRGG----ILGLGGVGHMGVLIAK 201
           I + M+ E  A        +  PLS     GL+++G+R G    I G G +G + +L AK
Sbjct: 151 IGN-MSYENGA--------MLEPLSVALA-GLQRAGVRLGDPVLICGAGPIGLITMLCAK 200

Query: 202 AMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSL---------DYIIDTV 252
           A G    VI+  D+ R++  + +  +      +    +E+A  +            ++  
Sbjct: 201 AAGACPLVITDIDEGRLKFAKEICPEVVTHKVERLSAEESAKKIVESFGGIEPAVALECT 260

Query: 253 PANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAIT--GSFIGSMKET-KEM 309
                +   +  +K  GK+ + GV    +Q   P +    + +     +      T    
Sbjct: 261 GVESSIAAAIWAVKFGGKVFVIGVGKNEIQI--PFMRASVREVDLQFQY--RYCNTWPRA 316

Query: 310 LEFCREKG--VTSMI-EVIKMDYVNKAFERLEKN 340
           +         +T ++     ++   KAFE     
Sbjct: 317 IRLVENGLVDLTRLVTHRFPLEDALKAFETASDP 350

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1 Length = 374

 Score =  133 bits (337), Expect = 5e-36
 Identities = 79/363 (21%), Positives = 144/363 (39%), Gaps = 33/363 (9%)

Query: 8   RATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVP 67
           +A + W A  P   L      +    A ++ IK++  G+CHTD++ +        +P+V 
Sbjct: 10  KAAVAWEANKP---LVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKDGFPVVL 66

Query: 68  GHEVVGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNK-KIWSYNDVYT 126
           GHE  G V+ VG  V+ F+ G+KV + + +  C  CR C++     C K       DV +
Sbjct: 67  GHEGAGIVESVGPGVTEFQPGEKV-IPLFISQCGECRFCQSPKTNQCVKGWANESPDVMS 125

Query: 127 DGKP--TQGG-----------FAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLS 173
             +   T  G           F++  VV+Q  V KI     L+    L C   T F    
Sbjct: 126 PKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSAPLDTVCLLGCGVSTGFGAAV 185

Query: 174 HFGLKQSGLRGGILGLGGVGHMGVLIAKAMG-HHVTVISSSDKKRVEAMEHLGADQYLVS 232
           +    + G    + GLG VG   V+   + G   +  +  +  K  +A    GA  ++  
Sbjct: 186 NTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKV-FGATDFVNP 244

Query: 233 SDATR-MQEAADSL-----DYIIDTVPANHPLEPYLSLL-KLDGKLILTGVINTPMQFLT 285
           +D +  + +    +     D+ ++ V     +   L    K  G  +L G  +       
Sbjct: 245 NDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLHDVATR 304

Query: 286 PMVMLGRKAITGSFIGSMKETKEM---LEFCREK--GVTSMI-EVIKMDYVNKAFERLEK 339
           P+ ++  +   GS  G  K    +   ++   +K   +   I   + ++ VN A + ++ 
Sbjct: 305 PIQLIAGRTWKGSMFGGFKGKDGVPKMVKAYLDKKVKLDEFITHRMPLESVNDAIDLMKH 364

Query: 340 NDV 342
              
Sbjct: 365 GKC 367

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A* Length = 373

 Score =  133 bits (336), Expect = 6e-36
 Identities = 79/342 (23%), Positives = 133/342 (38%), Gaps = 43/342 (12%)

Query: 33  GAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVG 92
            A +V IK++   +CHTD + +        +P++ GH   G V+ VG  V+  K GD V 
Sbjct: 30  KAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHLGAGIVESVGEGVTKLKAGDTV- 88

Query: 93  VGVLVGCCRNCRPCEADVEQYCNK-KIWSYNDVYTDGKP--TQGG-----------FAES 138
           + + +  C  C+ C       C K ++     +  DG    T  G           F+E 
Sbjct: 89  IPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEY 148

Query: 139 MVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFG--LKQSGLRGG----ILGLGGV 192
            VV    V KI     L++   L C   T       +G  +  + L  G    + GLGGV
Sbjct: 149 TVVADISVAKIDPLAPLDKVCLLGCGIST------GYGAAVNTAKLEPGSVCAVFGLGGV 202

Query: 193 GHMGVLIAKAMG-HHVTVISSSDKKRVEAMEHLGADQYLVSSDATR-MQEAADSL----- 245
           G   ++  K  G   +  +  +  K   A E  GA + +   D ++ +QE    +     
Sbjct: 203 GLAVIMGCKVAGASRIIGVDINKDKFARAKE-FGATECINPQDFSKPIQEVLIEMTDGGV 261

Query: 246 DYIIDTVPANHPLEPYLSLL-KLDGKLILTGVINTPMQFLT-PMVMLGRKAITGSFIGSM 303
           DY  + +     +   L    K  G  ++ GV  +  +  T P  ++  +   G+  G  
Sbjct: 262 DYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQLVTGRTWKGTAFGGW 321

Query: 304 KETKEM---LEFCREK--GVTSMI-EVIKMDYVNKAFERLEK 339
           K  + +   +     K   V   +   +  D +NKAFE +  
Sbjct: 322 KSVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINKAFELMHS 363

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1 Length = 371

 Score =  132 bits (334), Expect = 1e-35
 Identities = 75/373 (20%), Positives = 133/373 (35%), Gaps = 55/373 (14%)

Query: 8   RATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVP 67
            A +                 +R    ++V +KV+  G+CHTD+        +   P V 
Sbjct: 8   IAAVTPCKGAD---FELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYPV-PLPAVL 63

Query: 68  GHEVVGEVKEVGSEVSNFKVGDKVGVGVLV-GCCRNCRPCEADVEQYCNKKIWSYND--- 123
           GHE  G ++ +G  V+  +VGD V   VL  G C  C  C      YC  + +  N    
Sbjct: 64  GHEGSGIIEAIGPNVTELQVGDHV---VLSYGYCGKCTQCNTGNPAYC-SEFFGRNFSGA 119

Query: 124 -------VYTDGKPT-------QGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVF 169
                  + T  +         Q  FA   +  +   VK+   + +E   PL C   T  
Sbjct: 120 DSEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKDVPIELLGPLGCGIQT-- 177

Query: 170 SPLSHFG----LKQSGLRGG----ILGLGGVGHMGVLIAKAMG-HHVTVISSSDKKRVEA 220
                 G    +    +         G G VG   +L AK  G   +  +   + +   A
Sbjct: 178 ------GAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELA 231

Query: 221 MEHLGADQYLVSSD---ATRMQEAADS-LDYIIDTVPANHPLEPYLSLLKLDGKLILTGV 276
            + LGA   + S        ++E  D  +++ +++  +   L+  +  L + GK+ + G 
Sbjct: 232 KQ-LGATHVINSKTQDPVAAIKEITDGGVNFALESTGSPEILKQGVDALGILGKIAVVGA 290

Query: 277 INTPMQFLTPM--VMLGRKAITGSFIGSMKETKE---MLEFCREKG--VTSMIEVIKMDY 329
                     +  ++LG K I G   GS    K    ++   ++       +++    D 
Sbjct: 291 PQLGTTAQFDVNDLLLGGKTILGVVEGSGSPKKFIPELVRLYQQGKFPFDQLVKFYAFDE 350

Query: 330 VNKAFERLEKNDV 342
           +N+A     K   
Sbjct: 351 INQAAIDSRKGIT 363

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ... Length = 374

 Score =  131 bits (331), Expect = 4e-35
 Identities = 86/367 (23%), Positives = 147/367 (40%), Gaps = 47/367 (12%)

Query: 8   RATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVP 67
           +A + W  K P    S     +    A +V IK++  GIC +D H +   L     P++ 
Sbjct: 10  KAAVLWEEKKP---FSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVT-PLPVIA 65

Query: 68  GHEVVGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNK-KIWSYNDVYT 126
           GHE  G V+ +G  V+  + GDKV + +    C  CR C+     +C K  +        
Sbjct: 66  GHEAAGIVESIGEGVTTVRPGDKV-IPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQ 124

Query: 127 DGKP--TQGG-----------FAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLS 173
           DG    T  G           F++  VVD+  V KI     LE+   + C   T      
Sbjct: 125 DGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFST------ 178

Query: 174 HFG--LKQSGLRGG----ILGLGGVGHMGVLIAKAMG-HHVTVISSSDKKRVEAMEHLGA 226
            +G  +K + +  G    + GLGGVG   ++  KA G   +  +  +  K  +A E +GA
Sbjct: 179 GYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKE-VGA 237

Query: 227 DQYLVSSDATR-MQEAADSL-----DYIIDTVPANHPLEPYLSLL-KLDGKLILTGVINT 279
            + +   D  + +QE    +     D+  + +     +   LS   +  G  ++ GV   
Sbjct: 238 TECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPD 297

Query: 280 PMQFLT-PMVMLGRKAITGSFIGSMKETKEM---LEFCREK--GVTSMI-EVIKMDYVNK 332
                  PM++L  +   G+  G  K    +   +     K   +  +I  V+  + +N+
Sbjct: 298 SQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINE 357

Query: 333 AFERLEK 339
            F+ L  
Sbjct: 358 GFDLLRS 364

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A* Length = 373

 Score =  128 bits (325), Expect = 3e-34
 Identities = 93/369 (25%), Positives = 157/369 (42%), Gaps = 47/369 (12%)

Query: 8   RATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVP 67
           +A + W    P   LS  T T+    A +V IK+L  GIC +D   +K  +    +P++ 
Sbjct: 11  KAAVAWEPHKP---LSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIPS-KFPVIL 66

Query: 68  GHEVVGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNK-KIWSYNDVYT 126
           GHE VG V+ +G+ V+  K GDKV + + V  C +CR C++    +C K  + +   +  
Sbjct: 67  GHEAVGVVESIGAGVTCVKPGDKV-IPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMA 125

Query: 127 DGKP--TQGG-----------FAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLS 173
           D     T  G           F E  VV    V KI     LE    L+  G       +
Sbjct: 126 DMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKAPLESC--LIGCGFA-----T 178

Query: 174 HFG--LKQSGLRGG----ILGLGGVGHMGVLIAKAMG-HHVTVISSSDKKRVEAMEHLGA 226
            +G  +  + +  G    + GLGGVG   ++  KA G   +  + +   K  +A+E LGA
Sbjct: 179 GYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIE-LGA 237

Query: 227 DQYLVSSDATR-MQEAADSL-----DYIIDTVPANHPLEP-YLSLLKLDGKLILTGVINT 279
            + L   D  + + E          DY ++       +     S     G  ++ G+ + 
Sbjct: 238 TECLNPKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASP 297

Query: 280 PMQFLT-PMVMLGRKAITGSFIGSMK--ETKEMLEFCREK--GVTSMI-EVIKMDYVNKA 333
             +    P+++L  +++ GS  G  K  E   +++   +K   V  ++   + +D +NKA
Sbjct: 298 NERLPLDPLLLLTGRSLKGSVFGGFKGEEVSRLVDDYMKKKINVNFLVSTKLTLDQINKA 357

Query: 334 FERLEKNDV 342
           FE L     
Sbjct: 358 FELLSSGQG 366

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A* Length = 376

 Score =  128 bits (325), Expect = 3e-34
 Identities = 76/373 (20%), Positives = 141/373 (37%), Gaps = 51/373 (13%)

Query: 8   RATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVP 67
           +A I W    P   L      +    A +V I+V+   +C TDI+          +P+V 
Sbjct: 10  KAAIAWKTGSP---LCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPKKKA-LFPVVL 65

Query: 68  GHEVVGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYT- 126
           GHE  G V+ VG  V+NFK GDKV +      C+ C+ C + +   C K           
Sbjct: 66  GHECAGIVESVGPGVTNFKPGDKV-IPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQ 124

Query: 127 ------------DGKP-----TQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVF 169
                        G+          F++  VV +  + ++ D   LE+   + C   +  
Sbjct: 125 ELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARVDDEANLERVCLIGCGFSS-- 182

Query: 170 SPLSHFG--LKQSGLRGG----ILGLGGVGHMGVLIAKAMG-HHVTVISSSDKKRVEAME 222
                +G  +  + +  G    + GLG VG   ++  K  G   +  I  + +K  +A  
Sbjct: 183 ----GYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKA 238

Query: 223 HLGADQYLVSSDATR-MQEAADSL-----DYIIDTVPANHPLEPYL-SLLKLDGKLILTG 275
            LGA   L   +  + +Q+    L     DY +D       L+  +   +   G   + G
Sbjct: 239 -LGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVG 297

Query: 276 VINTPMQFLTPMVMLGRKAITGSFIGSMKETKE---MLEFCREK--GVTSMI-EVIKMDY 329
                M     + ++  ++I G+F G  K       ++   + K   +  ++   +  + 
Sbjct: 298 AKVDEMTI-PTVDVILGRSINGTFFGGWKSVDSVPNLVSDYKNKKFDLDLLVTHALPFES 356

Query: 330 VNKAFERLEKNDV 342
           +N A + +++   
Sbjct: 357 INDAIDLMKEGKS 369

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A Length = 357

 Score =  126 bits (320), Expect = 8e-34
 Identities = 65/366 (17%), Positives = 124/366 (33%), Gaps = 77/366 (21%)

Query: 17  DPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNY------PMVPGHE 70
           DP+ ++      L      DV +K+L   I  +DI+ I+      NY      P V G+E
Sbjct: 37  DPAKVVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQG-----NYGLLPELPAVGGNE 91

Query: 71  VVGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKP 130
            V +V  VGS V+  K GD V +    G                                
Sbjct: 92  GVAQVVAVGSNVTGLKPGDWV-IPANAG-------------------------------- 118

Query: 131 TQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGG----I 186
             G +    V  ++ ++++P  + L+ AA L     T +  L  F      L+ G     
Sbjct: 119 -LGTWRTEAVFSEEALIQVPSDIPLQSAATLGVNPCTAYRMLMDFE----QLQPGDSVIQ 173

Query: 187 LGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGADQYLVSSDATRMQEAA 242
                GVG   + IA A+G     +        +  +    LGA+ ++++ +  R  E  
Sbjct: 174 NASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAE-HVITEEELRRPEMK 232

Query: 243 DSL------DYIIDTVPANHPLEPYLSLLKLDGKLILTGVIN-TPMQFLTPMVMLGRKAI 295
           +           ++ V         L  L   G ++  G +   P+     +++     +
Sbjct: 233 NFFKDMPQPRLALNCV-GGKSSTELLRQLARGGTMVTYGGMAKQPVVASVSLLIFKDLKL 291

Query: 296 TGSFIGSMKET----------KEMLEFCREKGVTSMI-EVIKMDYVNKAFERLEKNDVRY 344
            G ++   K+             + +  R   +T+     + +     A E   K  +  
Sbjct: 292 RGFWLSQWKKDHSPDQFKELILTLCDLIRRGQLTAPACSQVPLQDYQSALEASMKPFISS 351

Query: 345 RFVVDV 350
           + ++ +
Sbjct: 352 KQILTM 357

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis} Length = 315

 Score =  121 bits (305), Expect = 5e-32
 Identities = 56/322 (17%), Positives = 118/322 (36%), Gaps = 62/322 (19%)

Query: 33  GAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVG 92
            A+D+ ++    GI   D   IK +    +   VPG +  G + +VG++V +  +G +V 
Sbjct: 28  AADDILVQNQAIGINPVDWKFIKANPINWSNGHVPGVDGAGVIVKVGAKVDSKMLGRRV- 86

Query: 93  VGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDG 152
                                           Y       G FAE  V++   V+ +PD 
Sbjct: 87  -------------------------------AYHTSLKRHGSFAEFTVLNTDRVMTLPDN 115

Query: 153 MALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISS 212
           ++ E+AA L C  +T +       L        I+G G V ++   +    G+ V ++S+
Sbjct: 116 LSFERAAALPCPLLTAWQAFEKIPL-TKQREVLIVGFGAVNNLLTQMLNNAGYVVDLVSA 174

Query: 213 SDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPYLSLLKLDGKLI 272
           S  +        G     +  + +   +       I D V + +     +  LK +G +I
Sbjct: 175 SLSQ--ALAAKRGVRH--LYREPS---QVTQKYFAIFDAVNSQN-AAALVPSLKANGHII 226

Query: 273 LTGVINTPMQFLTPMVMLGRKAITGS--FIGSMKETKEMLE--FCREKG--VTSMIE--- 323
               I   +    P+     + I+     +G++ +  +  +     ++G  + ++I    
Sbjct: 227 C---IQDRIPA--PIDPAFTRTISYHEIALGALHDFGDRQDWQILMQQGEALLTLIAQGK 281

Query: 324 -------VIKMDYVNKAFERLE 338
                  + + + + +A +  E
Sbjct: 282 MEIAAPDIFRFEQMIEALDHSE 303

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} Length = 375

 Score =  122 bits (308), Expect = 7e-32
 Identities = 66/315 (20%), Positives = 107/315 (33%), Gaps = 63/315 (20%)

Query: 64  PMVPGHEVVGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYND 123
           P+  G +V G V E G +V  FK GD+V                                
Sbjct: 95  PLTLGRDVSGVVMECGLDVKYFKPGDEV-----WAAV----------------------- 126

Query: 124 VYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLR 183
                   QG  +E +VV    V   P  +   QAA L    +T +S ++  G       
Sbjct: 127 ----PPWKQGTLSEFVVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLNDKNC 182

Query: 184 GG--IL---GLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYL--VSSDAT 236
            G  +L     GGVG   + + KA   HVT + S D    E +  LGAD  +   S    
Sbjct: 183 TGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCSQDA--SELVRKLGADDVIDYKSGSVE 240

Query: 237 RMQEAADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAIT 296
              ++    D+I+D V            LK         ++   +  +  + +      T
Sbjct: 241 EQLKSLKPFDFILDNV-GGSTETWAPDFLKKWSGATYVTLVTPFLLNMDRLGIADGMLQT 299

Query: 297 GSFIGS----------------MKETKEMLEFCR---EKG-VTSMI-EVIKMDYVNKAFE 335
           G  +GS                   +   L+      + G +  +I +      V +AF 
Sbjct: 300 GVTVGSKALKHFWKGVHYRWAFFMASGPCLDDIAELVDAGKIRPVIEQTFPFSKVPEAFL 359

Query: 336 RLEKNDVRYRFVVDV 350
           ++E+   R + V++V
Sbjct: 360 KVERGHARGKTVINV 374

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} Length = 321

 Score =  121 bits (305), Expect = 7e-32
 Identities = 68/336 (20%), Positives = 119/336 (35%), Gaps = 65/336 (19%)

Query: 33  GAEDVYIKVLYCGICHTDIHQIKNDLGM-----SNYPMVPGHEVVGEVKEVGSEVSNFKV 87
               + IKV    +   D         +     +N P   G++  GEV E+GS+V+N  +
Sbjct: 32  RKNQMLIKVHAASLNPIDYKTRNGSGFVAKKLKNNLPSGLGYDFSGEVIELGSDVNNVNI 91

Query: 88  GDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVV 147
           GDKV     +G                                    +AE +      ++
Sbjct: 92  GDKV-----MGI--------------------------AGFPDHPCCYAEYVCASPDTII 120

Query: 148 KIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGG--IL---GLGGVGHMGVLIAKA 202
           +  + ++  QAA L  AG+T         L Q+ ++ G  +L   G GGVGH+ + +AK 
Sbjct: 121 QKLEKLSFLQAASLPTAGLTA-----LQALNQAEVKQGDVVLIHAGAGGVGHLAIQLAKQ 175

Query: 203 MGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRM---QEAADSLDYIIDTVPANHPLE 259
            G  V   +S        ++ LGA+Q +   +          +  +D +ID V       
Sbjct: 176 KGTTVITTASKRN--HAFLKALGAEQCI---NYHEEDFLLAISTPVDAVIDLV-GGDVGI 229

Query: 260 PYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCR---EK 316
             +  LK  G ++    I         + +  +K      +   +   E L +      +
Sbjct: 230 QSIDCLKETGCIVSVPTITAGR----VIEVAKQKHRRAFGL-LKQFNIEELHYLGKLVSE 284

Query: 317 G-VTSMI-EVIKMDYVNKAFERLEKNDVRYRFVVDV 350
             +   I  + ++     A E LE   VR + V  V
Sbjct: 285 DKLRIEISRIFQLSEAVTAHELLETGHVRGKLVFKV 320

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 Length = 351

 Score =  120 bits (304), Expect = 2e-31
 Identities = 61/287 (21%), Positives = 102/287 (35%), Gaps = 64/287 (22%)

Query: 33  GAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPM------VPGHEVVGEVKEVGSEVSNFK 86
               V IKV  CG+   + +          Y         PG +V G ++ VG   S FK
Sbjct: 56  KDHQVLIKVHACGVNPVETYIRSG-----TYSRKPLLPYTPGSDVAGVIEAVGDNASAFK 110

Query: 87  VGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFV 146
            GD+V     +                                   GG+AE  +     V
Sbjct: 111 KGDRVFTSSTIS----------------------------------GGYAEYALAADHTV 136

Query: 147 VKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSG-LRGG--IL---GLGGVGHMGVLIA 200
            K+P+ +  +Q A +     T      +  L  S  ++ G  +L     GGVG     IA
Sbjct: 137 YKLPEKLDFKQGAAIGIPYFTA-----YRALIHSACVKAGESVLVHGASGGVGLAACQIA 191

Query: 201 KAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSD---ATRMQEAADS--LDYIIDTVPAN 255
           +A G  +   + +++   + +   GA +     +     ++++      +D II+ + AN
Sbjct: 192 RAYGLKILGTAGTEEG-QKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEML-AN 249

Query: 256 HPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGS 302
             L   LSLL   G++I+ G   T         M    +I G  + S
Sbjct: 250 VNLSKDLSLLSHGGRVIVVGSRGTIEINPRDT-MAKESSIIGVTLFS 295

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} Length = 349

 Score =  118 bits (299), Expect = 8e-31
 Identities = 49/294 (16%), Positives = 92/294 (31%), Gaps = 56/294 (19%)

Query: 33  GAEDVYIKVLYCGICHTDIHQIKNDLGM-SNYPMVPGHEVVGEVKEVGSEV-SNFKVGDK 90
           G   V IKV    I  +D+  IK   G         G E VG +   G E  +   VG +
Sbjct: 48  GPSQVLIKVNLASINPSDVAFIKGQYGQPRVKGRPAGFEGVGTIVAGGDEPYAKSLVGKR 107

Query: 91  VGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIP 150
           V                                 +  G    G +AE  V +    + + 
Sbjct: 108 V--------------------------------AFATGLSNWGSWAEYAVAEAAACIPLL 135

Query: 151 DGMALEQAAPLLCAGVTVFSPLSHFGLK------QSGLRGGILGLGGVGHMGVLIAKAMG 204
           D +  E  A ++   +T  +       +       +       G   +  + + +AK  G
Sbjct: 136 DTVRDEDGAAMIVNPLTAIAMFDIVKQEGEKAFVMTA------GASQLCKLIIGLAKEEG 189

Query: 205 HHVTVISSSDKKRVEAMEHLGADQYLVSSD---ATRMQEAADSL--DYIIDTVPANHPLE 259
               V    D++ +  ++ +GA   L          ++E   +      +D V       
Sbjct: 190 FRPIVTVRRDEQ-IALLKDIGAAHVLNEKAPDFEATLREVMKAEQPRIFLDAVTGPL-AS 247

Query: 260 PYLSLLKLDGKLILTGVIN-TPMQFLTPM-VMLGRKAITGSFIGS-MKETKEML 310
              + +    + I+ G ++        P  ++   K I G ++   M++ KE  
Sbjct: 248 AIFNAMPKRARWIIYGRLDPDATVIREPGQLIFQHKHIEGFWLSEWMRQFKERR 301

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} Length = 353

 Score =  118 bits (297), Expect = 1e-30
 Identities = 78/338 (23%), Positives = 124/338 (36%), Gaps = 74/338 (21%)

Query: 33  GAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPM------VPGHEVVGEVKEVGSEVSNFK 86
           G  +V ++    G+   DI Q +      +YP       + G E+ GE+  VG  VS + 
Sbjct: 54  GEGEVLVRAEAIGVNRPDIAQRQG-----SYPPPKDASPILGLELSGEIVGVGPGVSGYA 108

Query: 87  VGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFV 146
           VGDKV  G+  G                                  G +AE  ++    +
Sbjct: 109 VGDKV-CGLANG----------------------------------GAYAEYCLLPAGQI 133

Query: 147 VKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGG--IL---GLGGVGHMGVLIAK 201
           +  P G    +AA L     TV++ L        GL  G  +L   G  G+G   + +A+
Sbjct: 134 LPFPKGYDAVKAAALPETFFTVWANLFQMA----GLTEGESVLIHGGTSGIGTTAIQLAR 189

Query: 202 AMGHHVTVISSSDKKRVEAMEHLGADQ---YLVSSDATRMQEAADS-LDYIIDTVPANHP 257
           A G  V   + S  K  EA E LGA +   Y     A  ++      +D I+D + A + 
Sbjct: 190 AFGAEVYATAGSTGK-CEACERLGAKRGINYRSEDFAAVIKAETGQGVDIILDMIGAAY- 247

Query: 258 LEPYLSLLKLDGKLILTGVIN--TPMQFLTPMVMLGRKAITGSFIGS-MKETKEMLEFCR 314
            E  ++ L  DG L +   +      +     +M+ R  +TGS +     E K  +    
Sbjct: 248 FERNIASLAKDGCLSIIAFLGGAVAEKVNLSPIMVKRLTVTGSTMRPRTAEEKRAIRDDL 307

Query: 315 EKGVTSMIE----------VIKMDYVNKAFERLEKNDV 342
              V  ++E          V   + V  A   LE+   
Sbjct: 308 LSEVWPLLEAGTVAPVIHKVFAFEDVADAHRLLEEGSH 345

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* Length = 371

 Score =  117 bits (295), Expect = 4e-30
 Identities = 58/360 (16%), Positives = 115/360 (31%), Gaps = 72/360 (20%)

Query: 33  GAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVG 92
             + VY++V    I  +D          +      G +  G V  VGS+V++ +VGD+V 
Sbjct: 35  PRDQVYVRVEAVAINPSDTSMRG---QFATPWAFLGTDYAGTVVAVGSDVTHIQVGDRV- 90

Query: 93  VGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDG 152
                G      P                        P QG F++  V   +   KIP G
Sbjct: 91  ----YGAQNEMCP----------------------RTPDQGAFSQYTVTRGRVWAKIPKG 124

Query: 153 MALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGG----------IL---GLGGVGHMGVLI 199
           ++ EQAA L     T    +   GL                  +L   G      + + +
Sbjct: 125 LSFEQAAALPAGISTAGLAMKLLGLPLPSPSADQPPTHSKPVYVLVYGGSTATATVTMQM 184

Query: 200 AKAMGHHVTVISSSDKKRVEAMEHLGADQ---YLVSSDATRMQEAA-DSLDYIIDTVPAN 255
            +  G+      S      +  +  GA++   Y   + A  ++    ++L Y +D +   
Sbjct: 185 LRLSGYIPIATCSP--HNFDLAKSRGAEEVFDYRAPNLAQTIRTYTKNNLRYALDCITNV 242

Query: 256 HPLEP-YLSLLKLDGKLILTGVINTPMQ-------FLTPMVMLGRKAITGSFIGSMKETK 307
                 + ++ +  G  +                   T    +  +  T         ++
Sbjct: 243 ESTTFCFAAIGRAGGHYVSLNPFPEHAATRKMVTTDWTLGPTIFGEGSTWPAPYGRPGSE 302

Query: 308 EMLEFCRE--KGVTSMIE--VIK----------MDYVNKAFERLEKNDVR-YRFVVDVAG 352
           E  +F  +  +    ++E   +            D++ +  E + K ++   + VV + G
Sbjct: 303 EERQFGEDLWRIAGQLVEDGRLVHHPLRVVQGGFDHIKQGMELVRKGELSGEKLVVRLEG 362

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} Length = 343

 Score =  116 bits (293), Expect = 5e-30
 Identities = 57/279 (20%), Positives = 92/279 (32%), Gaps = 54/279 (19%)

Query: 33  GAEDVYIKVLYCGICHTDIHQIKNDLGMSNY--PMVPGHEVVGEVKEVGSEVSNFKVGDK 90
               V +++   G    D      +   +    P + G ++ G V  VG EV +F+VGD 
Sbjct: 31  APGQVLVQIEASGTNPLDAKIRAGEAPHAQQPLPAILGMDLAGTVVAVGPEVDSFRVGDA 90

Query: 91  VGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIP 150
           V      G                                 QG  A+   VD + +   P
Sbjct: 91  V-----FGLTG-------------------------GVGGLQGTHAQFAAVDARLLASKP 120

Query: 151 DGMALEQAA--PLLCAGVTVFSPLSHFGLKQSGLRGG--IL---GLGGVGHMGVLIAKAM 203
             + + QA+  PL    +T +  L         ++ G  +L   G GGVGH+ + IA A 
Sbjct: 121 AALTMRQASVLPL--VFITAWEGLVDRA----QVQDGQTVLIQGGGGGVGHVAIQIALAR 174

Query: 204 GHHVTVISSSDKKRVEAMEHLGADQ---YLVSSDATRMQEAADSLDYIIDTVPANHPLEP 260
           G  V   +      +E +  LGA          D      A    D + DT+     L+ 
Sbjct: 175 GARVFATARGSD--LEYVRDLGATPIDASREPEDYAAEHTAGQGFDLVYDTLGGPV-LDA 231

Query: 261 YLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSF 299
             S +K  G ++               +   +   +G F
Sbjct: 232 SFSAVKRFGHVV---SCLGWGTHKLAPLSFKQATYSGVF 267

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens} Length = 349

 Score =  115 bits (291), Expect = 1e-29
 Identities = 64/352 (18%), Positives = 123/352 (34%), Gaps = 88/352 (25%)

Query: 33  GAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPM------VPGHEVVGEVKEVGSEVSNFK 86
              ++ I+V  CG+   D+   +      N         VPG E  G V+ +G  V  ++
Sbjct: 29  QDGELKIRVKACGLNFIDLMVRQG-----NIDNPPKTPLVPGFECSGIVEALGDSVKGYE 83

Query: 87  VGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFV 146
           +GD+V +  +                                      +AE +    +FV
Sbjct: 84  IGDRV-MAFVNY----------------------------------NAWAEVVCTPVEFV 108

Query: 147 VKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGG--IL---GLGGVGHMGVLIAK 201
            KIPD M+  +AA      VT +  L         LR G  +L     GGVG     +  
Sbjct: 109 YKIPDDMSFSEAAAFPMNFVTAYVMLFEVA----NLREGMSVLVHSAGGGVGQAVAQLCS 164

Query: 202 AMGHHVTVISSSDKKRVEAMEHLGADQYLVSSD-ATRMQEAA-DSLDYIIDTVPANHPLE 259
            + +     ++S  K  EA++      +  ++D    ++  + + +D ++D +  ++   
Sbjct: 165 TVPNVTVFGTASTFKH-EAIKDSVTHLFDRNADYVQEVKRISAEGVDIVLDCLCGDN-TG 222

Query: 260 PYLSLLKLDGKLILTGVIN----------------TPMQFLTPM-VMLGRKAITGSFIGS 302
             LSLLK  G  IL G  N                  ++ + P+ +    K I G  + +
Sbjct: 223 KGLSLLKPLGTYILYGSSNMVTGETKSFFSFAKSWWQVEKVNPIKLYEENKVIAGFSLLN 282

Query: 303 MKETKEMLEFCRE--KGVTSMIE----------VIKMDYVNKAFERLEKNDV 342
           +   +      R   + +  +            +  ++ V +A +R+     
Sbjct: 283 LLFKQGRAGLIRGVVEKLIGLYNQKKIKPVVDSLWALEEVKEAMQRIHDRGN 334

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} Length = 342

 Score =  115 bits (290), Expect = 1e-29
 Identities = 67/336 (19%), Positives = 116/336 (34%), Gaps = 74/336 (22%)

Query: 33  GAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPM------VPGHEVVGEVKEVGSEVSNFK 86
           G   V + V   G+C  D    K       Y +      VPG E  G V+    E S  K
Sbjct: 47  GPNVVVVDVKAAGVCFPDYLMTKG-----EYQLKMEPPFVPGIETAGVVRSAP-EGSGIK 100

Query: 87  VGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFV 146
            GD+V                                         GG+AE + V    +
Sbjct: 101 PGDRVM-----------------------------------AFNFIGGYAERVAVAPSNI 125

Query: 147 VKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSG-LRGG----ILG-LGGVGHMGVLIA 200
           +  P  +   +A  L+    T+     +F   + G LR G    +LG  GG+G   + IA
Sbjct: 126 LPTPPQLDDAEAVALIANYHTM-----YFAYARRGQLRAGETVLVLGAAGGIGTAAIQIA 180

Query: 201 KAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSD--ATRMQEAADS--LDYIIDTVPANH 256
           K MG  V  + +      E ++ +GAD  L   +  A  ++EA     +D ++D +    
Sbjct: 181 KGMGAKVIAVVNRTAAT-EFVKSVGADIVLPLEEGWAKAVREATGGAGVDMVVDPIGGPA 239

Query: 257 PLEPYLSLLKLDGKLILTGVINTPM-QFLTPMVMLGRKAITGSFIGSMKETKEMLEFCRE 315
             +  +  L  +G+L++ G     +       ++L   ++ G   G    T     +  +
Sbjct: 240 -FDDAVRTLASEGRLLVVGFAAGGIPTIKVNRLLLRNASLIGVAWGEFLRTHADYLYETQ 298

Query: 316 KGVTSMIE---------VIKMDYVNKAFERLEKNDV 342
            G+  ++           I +    +A +      V
Sbjct: 299 AGLEKLVAEGMRPPVSARIPLSEGRQALQDFADGKV 334

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} Length = 340

 Score =  112 bits (283), Expect = 1e-28
 Identities = 47/297 (15%), Positives = 101/297 (34%), Gaps = 64/297 (21%)

Query: 33  GAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPM------VPGHEVVGEVKEVGSEVSNFK 86
              +V++++L   I  +D+  I        Y        +PG+E VG V+ VG+ VS   
Sbjct: 31  KDNEVFVRMLVRPINPSDLIPITG-----AYAHRIPLPNIPGYEGVGIVENVGAFVSREL 85

Query: 87  VGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFV 146
           +G +V                                +   G   +G + E +     FV
Sbjct: 86  IGKRV--------------------------------LPLRG---EGTWQEYVKTSADFV 110

Query: 147 VKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSG-LRGG--IL---GLGGVGHMGVLIA 200
           V IPD +    AA +    +T           ++  L+    +L       +GH+   ++
Sbjct: 111 VPIPDSIDDFTAAQMYINPLTA-----WVTCTETLNLQRNDVLLVNACGSAIGHLFAQLS 165

Query: 201 KAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSD---ATRMQEAADS--LDYIIDTVPAN 255
           + +   +  ++ ++K   E +   GA   + +S       + E  +    D  ID++   
Sbjct: 166 QILNFRLIAVTRNNKHTEELLRL-GAAYVIDTSTAPLYETVMELTNGIGADAAIDSIGGP 224

Query: 256 HPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEF 312
                    L+ +G  +  G+++        +V   +       +    +     ++
Sbjct: 225 D-GNELAFSLRPNGHFLTIGLLSGIQVNWAEIVTKAKVHANIFHLRHWNDEVSPYKW 280

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* Length = 354

 Score =  111 bits (281), Expect = 3e-28
 Identities = 68/343 (19%), Positives = 128/343 (37%), Gaps = 79/343 (23%)

Query: 33  GAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPM------VPGHEVVGEVKEVGSEV-SNF 85
           G  +V +KV    +   D+ Q +       Y        + G E  G V E+G     ++
Sbjct: 48  GEGEVLLKVAASALNRADLMQRQG-----QYDPPPGASNILGLEASGHVAELGPGCQGHW 102

Query: 86  KVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKF 145
           K+GD   + +L G                                  GG A+ + V +  
Sbjct: 103 KIGDTA-MALLPG----------------------------------GGQAQYVTVPEGL 127

Query: 146 VVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGG--IL---GLGGVGHMGVLIA 200
           ++ IP+G+ L QAA +  A +T F  L   G     ++ G  +L   GL GVG   + + 
Sbjct: 128 LMPIPEGLTLTQAAAIPEAWLTAFQLLHLVG----NVQAGDYVLIHAGLSGVGTAAIQLT 183

Query: 201 KAMGHHVTVISSSDKKRVEAMEHLGADQ---YLVSSDATRMQEAADS--LDYIIDTVPAN 255
           +  G    V + S KK ++  E LGA     Y     +    +      ++ I+D +  +
Sbjct: 184 RMAGAIPLVTAGSQKK-LQMAEKLGAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIGGS 242

Query: 256 HPLEPYLSLLKLDGKLILTGVI--NTPMQFLTPMVMLGRKAITGSFIGS---------MK 304
           +  E  ++ L LDG+ +L G++        L   ++  R ++  S + S         + 
Sbjct: 243 Y-WEKNVNCLALDGRWVLYGLMGGGDINGPLFSKLLFKRGSLITSLLRSRDNKYKQMLVN 301

Query: 305 ETKE----MLEFCREKGVTSMI-EVIKMDYVNKAFERLEKNDV 342
              E           + +  ++  +  +  + +A + +E N  
Sbjct: 302 AFTEQILPHFSTEGPQRLLPVLDRIYPVTEIQEAHKYMEANKN 344

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A Length = 352

 Score =  111 bits (280), Expect = 5e-28
 Identities = 56/273 (20%), Positives = 98/273 (35%), Gaps = 33/273 (12%)

Query: 36  DVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVGV 95
           D  ++ L    C +DIH +        + M+ GHE VGEV EVGSEV +FK GD+V V  
Sbjct: 26  DAIVRPLAVAPCTSDIHTVFEGAIGERHNMILGHEAVGEVVEVGSEVKDFKPGDRVVVPA 85

Query: 96  LVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVV---DQKFVVKIPDG 152
           +    R     +    Q+    +  +           G F E   V   D   +  +P  
Sbjct: 86  ITPDWR-TSEVQRGYHQHSGGMLAGWK----FSNVKDGVFGEFFHVNDADMN-LAHLPKE 139

Query: 153 MALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGG----ILGLGGVGHMGVLIAKAMG-HHV 207
           + LE A  ++   +         G + + ++ G    ++G+G VG M V  A  +G   +
Sbjct: 140 IPLEAA--VMIPDMM---TTGFHGAELANIKLGDTVCVIGIGPVGLMSVAGANHLGAGRI 194

Query: 208 TVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSL---------DYIIDTVPANHPL 258
             +  S K   +     GA   +   +     +  + +         D ++      H  
Sbjct: 195 FAV-GSRKHCCDIALEYGATDIINYKN----GDIVEQILKATDGKGVDKVVIAGGDVHTF 249

Query: 259 EPYLSLLKLDGKLILTGVINTPMQFLTPMVMLG 291
              + ++K    +     +        P    G
Sbjct: 250 AQAVKMIKPGSDIGNVNYLGEGDNIDIPRSEWG 282

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A Length = 364

 Score =  108 bits (271), Expect = 7e-27
 Identities = 54/362 (14%), Positives = 109/362 (30%), Gaps = 84/362 (23%)

Query: 33  GAEDVYIKVLYCGICHTDIHQIK----------NDLGMSNYPMVPGHEVVGEVKEVGSEV 82
              +V +K L   +  +DI+QI+             G +      G+E + EV +VGS V
Sbjct: 32  APNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPCGNEGLFEVIKVGSNV 91

Query: 83  SNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVD 142
           S+ + GD V +   V                                   G +    + +
Sbjct: 92  SSLEAGDWV-IPSHVN---------------------------------FGTWRTHALGN 117

Query: 143 QKFVVKI-----------PDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGIL--GL 189
               +K+           P+G+ + Q A +    +T +  L+H+     G    I   G 
Sbjct: 118 DDDFIKLPNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGT 177

Query: 190 GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGADQYLVSSDATRMQEAADSL- 245
             VG     I K +  +   +        E +     LGA   +++ D    +E   ++ 
Sbjct: 178 SAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGAT-QVITEDQNNSREFGPTIK 236

Query: 246 ----------DYIIDTVPANHPLEPYLSLLKLDGKLILTGVIN-TPMQFLTPMVMLGRKA 294
                        ++ V            L  +G ++  G ++  P+   T + +     
Sbjct: 237 EWIKQSGGEAKLALNCV-GGKSSTGIARKLNNNGLMLTYGGMSFQPVTIPTSLYIFKNFT 295

Query: 295 ITGSFIGS---------MKETKEMLEFCREKGVTSMI-EVIKMDYVNKAFERLEKNDVRY 344
             G ++                +++ +  E  +T         D      E  +      
Sbjct: 296 SAGFWVTELLKNNKELKTSTLNQIIAWYEEGKLTDAKSIETLYDGTKPLHELYQDGVANS 355

Query: 345 RF 346
           + 
Sbjct: 356 KD 357

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D Length = 302

 Score =  106 bits (268), Expect = 1e-26
 Identities = 61/339 (17%), Positives = 111/339 (32%), Gaps = 81/339 (23%)

Query: 33  GAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPM------VPGHEVVGEVKEVGSEVSNFK 86
              +V ++V   G+   D            Y        +PG EVVG V           
Sbjct: 24  EEGEVVLRVEAVGLNFADHLMRLG-----AYLTRLHPPFIPGMEVVGVV----------- 67

Query: 87  VGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFV 146
            G +    ++                                    GG AE + V +  +
Sbjct: 68  EGRRY-AALVPQ----------------------------------GGLAERVAVPKGAL 92

Query: 147 VKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGG----ILG-LGGVGHMGVLIAK 201
           + +P+G++ E+AA    + +T      +  LK++  R G    +    G +G   V +A+
Sbjct: 93  LPLPEGLSPEEAAAFPVSFLTA-----YLALKRAQARPGEKVLVQAAAGALGTAAVQVAR 147

Query: 202 AMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPY 261
           AMG  V   +S  +K       LGA++    ++     +A   LD +++       +E  
Sbjct: 148 AMGLRVLAAASRPEKL-ALPLALGAEEAATYAEVPERAKAWGGLDLVLEVRGKE--VEES 204

Query: 262 LSLLKLDGKLILTGVIN-TPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTS 320
           L LL   G+L+  G             +M    A+ G ++  +     ++E      +  
Sbjct: 205 LGLLAHGGRLVYIGAAEGEVAPIPPLRLMRRNLAVLGFWLTPLLREGALVEEALGF-LLP 263

Query: 321 MIE---------VIKMDYVNKAFERLEKNDVRYRFVVDV 350
            +          V        AF  L       + VV +
Sbjct: 264 RLGRELRPVVGPVFPFAEAEAAFRALLDRGHTGKVVVRL 302

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli} Length = 363

 Score =  102 bits (255), Expect = 1e-24
 Identities = 66/349 (18%), Positives = 121/349 (34%), Gaps = 66/349 (18%)

Query: 33  GAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVG 92
              D+ ++V    +   D    ++         V G++  G V  VG +V+ F+ GD+V 
Sbjct: 51  AGHDILVEVKAVSVNPVDYKVRRSTPPDGTDWKVIGYDAAGIVSAVGPDVTLFRPGDEV- 109

Query: 93  VGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDG 152
                                       +   Y       G  AE  +VD++ V + P  
Sbjct: 110 ----------------------------F---YAGSIIRPGTNAEFHLVDERIVGRKPKT 138

Query: 153 MALEQAAPLLCAGVTVFSPL-SHFGLKQSGLRGG--IL---GLGGVGHMGVLIAKAM-GH 205
           +   +AA L    +T +        + +        IL   G GGVG + V IA+     
Sbjct: 139 LDWAEAAALPLTSITAWEAFFDRLDVNKPVPGAAPAILIVGGAGGVGSIAVQIARQRTDL 198

Query: 206 HVTVISSSDKKRVEAMEHLGADQ---YLVSSDATRMQEAADSLDYIIDTVPANHPLEPYL 262
            V   +S  + + E ++ LGA     +     A        +  ++  T   +       
Sbjct: 199 TVIATASRPETQ-EWVKSLGAHHVIDHSKPLAAEVAALGLGAPAFVFSTTHTDKHAAEIA 257

Query: 263 SLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGS----FIGSMKETKEM------LEF 312
            L+   G+  L   I+ P  F   +++  RKA++      F   M  T +M      L  
Sbjct: 258 DLIAPQGRFCL---IDDPSAF--DIMLFKRKAVSIHHELMFTRPMFGTPDMSEQGRLLND 312

Query: 313 CR---EKG-----VTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGS 353
                ++G     +T+ +  I    + +A   +E    R + V++  G 
Sbjct: 313 VSRLVDEGRLRTTLTNRLSPINAANLKQAHALVESGTARGKVVIEGFGL 361

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} Length = 346

 Score =  100 bits (251), Expect = 4e-24
 Identities = 70/319 (21%), Positives = 124/319 (38%), Gaps = 71/319 (22%)

Query: 64  PMVPGHEVVGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYND 123
           P V G + +G V+ VG+EV+ F  GD V                                
Sbjct: 60  PRVLGFDAIGVVESVGNEVTMFNQGDIV-------------------------------- 87

Query: 124 VYTDGKPT-QGGFAESMVVDQKFVVKIPDGMALEQAA--PLLCAGVTVF------SPLSH 174
            Y  G P   G  AE  +++++ V K P  ++ EQA   PL   G+T +        +S 
Sbjct: 88  -YYSGSPDQNGSNAEYQLINERLVAKAPKNISAEQAVSLPL--TGITAYETLFDVFGISR 144

Query: 175 FGLKQSGLRGGIL-GLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQ---YL 230
              +  G    I+ G GGVG +   IAKA G  V   +S ++   E  + +GAD    + 
Sbjct: 145 NRNENEGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETI-EWTKKMGADIVLNHK 203

Query: 231 VSSDATRMQEAADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVML 290
            S       +  + +DY+  T   +   +  + L+K  G +               +  L
Sbjct: 204 ESLLNQFKTQGIELVDYVFCTFNTDMYYDDMIQLVKPRGHIATIVAFENDQ----DLNAL 259

Query: 291 GRKAITGS----FIGSMKETKEMLEFCR---------EKG-----VTSMIEVIKMDYVNK 332
             K+++ S    F   + +T +M++            E+       T +IE +  + + +
Sbjct: 260 KPKSLSFSHEFMFARPLNQTDDMIKHHEYLEDITNKVEQNIYQPTTTKVIEGLTTENIYQ 319

Query: 333 AFERLEKNDVRYRFVVDVA 351
           A + LE N +  + V+++ 
Sbjct: 320 AHQILESNTMIGKLVINLN 338

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* Length = 362

 Score = 97.0 bits (242), Expect = 8e-23
 Identities = 65/355 (18%), Positives = 119/355 (33%), Gaps = 81/355 (22%)

Query: 33  GAEDVYIKVLYCGICHTDIHQIKNDLGMS-NYPMVPGHEVVGEVKEVGSEVS-NFKVGDK 90
           G  D+ ++  + G+  +DI+        S   P   G E +GEV  +G   S  + VG  
Sbjct: 52  GDGDLLVRNRFVGVNASDINYSAGRYDPSVKPPFDIGFEGIGEVVALGLSASARYTVGQA 111

Query: 91  VGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIP 150
           V     +                                   G FAE  VV       +P
Sbjct: 112 V---AYMA---------------------------------PGSFAEYTVVPASIATPVP 135

Query: 151 DGMALEQAAPLLCAGVTVFSPLSHFGLKQSG-LRGG--IL---GLGGVGHMGVLIAKAMG 204
                 +   LL +G T      +  LK+ G L  G  +L     GG G   + ++K   
Sbjct: 136 SVK--PEYLTLLVSGTTA-----YISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAK 188

Query: 205 HHVTVISSSDKKRVEAMEHLGADQYLVSSD---ATRMQEAA-DSLDYIIDTVPANHPLEP 260
            HV    SSD+K    ++ LG D+ +        T +++   + +D + ++V      + 
Sbjct: 189 CHVIGTCSSDEK-SAFLKSLGCDRPINYKTEPVGTVLKQEYPEGVDVVYESVGGAM-FDL 246

Query: 261 YLSLLKLDGKLILTGVIN----------TPMQFLTPMVMLGRKAITGSFIGSMKE----- 305
            +  L   G+LI+ G I+               L   ++    ++ G F+          
Sbjct: 247 AVDALATKGRLIVIGFISGYQTPTGLSPVKAGTLPAKLLKKSASVQGFFLNHYLSKYQAA 306

Query: 306 TKEMLEFCREKGVTSMIEVIKMDYVNK---------AFERLEKNDVRYRFVVDVA 351
              +LE C    +   +++  +    +         A   +       + VV++ 
Sbjct: 307 MSHLLEMCVSGDLVCEVDLGDLSPEGRFTGLESIFRAVNYMYMGKNTGKIVVELP 361

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* Length = 325

 Score = 96.1 bits (240), Expect = 1e-22
 Identities = 55/210 (26%), Positives = 84/210 (40%), Gaps = 50/210 (23%)

Query: 33  GAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVG 92
           G + V ++    G+   D +           P   G E  G V+ VG EV+ FKVGD+V 
Sbjct: 27  GPQAVVVRNKAIGLNFIDTYYRSGLYPAPFLPSGLGAEGAGVVEAVGDEVTRFKVGDRVA 86

Query: 93  VGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDG 152
                               Y                   G ++E  V+ +  +VK+ D 
Sbjct: 87  --------------------YGT--------------GPLGAYSEVHVLPEANLVKLADS 112

Query: 153 MALEQAAPLLCAGVTVFSPLSHFGLKQSG-LRGG--IL---GLGGVGHMGVLIAKAMGHH 206
           ++ EQAA L+  G+TV      + L+Q+  ++ G  IL     GGVG +    AKA+G  
Sbjct: 113 VSFEQAAALMLKGLTV-----QYLLRQTYQVKPGEIILFHAAAGGVGSLACQWAKALG-- 165

Query: 207 VTVIS--SSDKKRVEAMEHLGADQYLVSSD 234
             +I   SS +K   A    GA + +  S 
Sbjct: 166 AKLIGTVSSPEKAAHAKAL-GAWETIDYSH 194

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1 Length = 398

 Score = 96.6 bits (241), Expect = 2e-22
 Identities = 55/207 (26%), Positives = 84/207 (40%), Gaps = 16/207 (7%)

Query: 32  TGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKV 91
                V +KV+   IC +D H ++         +V GHE+ GEV E G +V N ++GD V
Sbjct: 31  KIEHGVILKVVSTNICGSDQHMVRGRTTAQV-GLVLGHEITGEVIEKGRDVENLQIGDLV 89

Query: 92  GVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDV---YTDGKPTQGGFAESMVV---DQKF 145
            V   V C R CR C+      C     +       Y D     GG AE ++V   D   
Sbjct: 90  SVPFNVACGR-CRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTGGQAEYVLVPYADFN- 147

Query: 146 VVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGG----ILGLGGVGHMGVLIAK 201
           ++K+PD     +    L     +  P  + G   +G+  G    + G G VG      A+
Sbjct: 148 LLKLPDRDKAMEKIRDLTCLSDIL-PTGYHGAVTAGVGPGSTVYVAGAGPVGLAAAASAR 206

Query: 202 AMG-HHVTVISSSDKKRVEAMEHLGAD 227
            +G   V V    +  R+   +  G +
Sbjct: 207 LLGAAVVIVG-DLNPARLAHAKAQGFE 232

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 327

 Score = 95.4 bits (238), Expect = 2e-22
 Identities = 41/205 (20%), Positives = 69/205 (33%), Gaps = 40/205 (19%)

Query: 33  GAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVG 92
              ++ ++    GI   D +         + P   G E  G V +VGS V + K GD+V 
Sbjct: 27  AENEIQVENKAIGINFIDTYIRSGLYPPPSLPSGLGTEAAGIVSKVGSGVKHIKAGDRVV 86

Query: 93  VGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDG 152
                               Y                   G ++    +       +P  
Sbjct: 87  --------------------YAQ--------------SALGAYSSVHNIIADKAAILPAA 112

Query: 153 MALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGIL---GLGGVGHMGVLIAKAMGHHVTV 209
           ++ EQAA     G+TV+  L      +   +   L     GGVG +    AKA+G  +  
Sbjct: 113 ISFEQAAASFLKGLTVYYLLRKTYEIKPDEQ--FLFHAAAGGVGLIACQWAKALGAKLIG 170

Query: 210 ISSSDKKRVEAMEHLGADQYLVSSD 234
              + +K   A++  GA Q +   +
Sbjct: 171 TVGTAQKAQSALKA-GAWQVINYRE 194

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} Length = 333

 Score = 95.4 bits (238), Expect = 2e-22
 Identities = 59/298 (19%), Positives = 114/298 (38%), Gaps = 60/298 (20%)

Query: 33  GAEDVYIKVLYCGICHTDIHQ---IKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGD 89
           G   V ++    G+   D +    I + L +   P+V G E    V+EVG  V++F VG+
Sbjct: 27  GPGQVRLRNTAIGVNFLDTYHRAGIPHPLVVGEPPIVVGFEAAAVVEEVGPGVTDFTVGE 86

Query: 90  KVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKI 149
           +V                      C               P  G +++  +   + ++K+
Sbjct: 87  RVC--------------------TCL--------------PPLGAYSQERLYPAEKLIKV 112

Query: 150 PDGMALEQA--APLLCAGVTVFSPLSHFGLKQSG-LRGG--IL---GLGGVGHMGVLIAK 201
           P  + L+    A L+  G+T       + L Q+  ++ G  +L     GG+GH+ V  A+
Sbjct: 113 PKDLDLDDVHLAGLMLKGMTA-----QYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWAR 167

Query: 202 AMGHHVTVISSSDKKRVEAMEHLGADQYLVSSD---ATRMQEAADS--LDYIIDTVPANH 256
            +G  V    S+++K   A +  G    +  S    A  ++E      +D + D++  + 
Sbjct: 168 HLGATVIGTVSTEEKAETARKL-GCHHTINYSTQDFAEVVREITGGKGVDVVYDSIGKDT 226

Query: 257 PLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKA---ITGSFIGSMKETKEMLE 311
            L+  L  L+  G     G  +     +  +  LG +    IT   +      +  ++
Sbjct: 227 -LQKSLDCLRPRGMCAAYGHASGVADPIRVVEDLGVRGSLFITRPALWHYMSNRSEID 283

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida} Length = 398

 Score = 90.4 bits (225), Expect = 2e-20
 Identities = 53/208 (25%), Positives = 82/208 (39%), Gaps = 19/208 (9%)

Query: 32  TGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKV 91
                V +KV+   IC +D H  +    +     V GHE+ GEV E GS+V    +GD V
Sbjct: 30  KLEHAVILKVVSTNICGSDQHIYRGRFIVPK-GHVLGHEITGEVVEKGSDVELMDIGDLV 88

Query: 92  GVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDV-----YTDGKPTQGGFAESMVV---DQ 143
            V   V C R CR C+      C   + + +       +       GG AE ++V   D 
Sbjct: 89  SVPFNVACGR-CRNCKEARSDVCENNLVNPDADLGAFGFDLK-GWSGGQAEYVLVPYADY 146

Query: 144 KFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGG----ILGLGGVGHMGVLI 199
             ++K  D     +    L     +  P    G   +G++ G    I G G VG      
Sbjct: 147 M-LLKFGDKEQAMEKIKDLTLISDIL-PTGFHGCVSAGVKPGSHVYIAGAGPVGRCAAAG 204

Query: 200 AKAMG-HHVTVISSSDKKRVEAMEHLGA 226
           A+ +G   V V    + +R++ +   G 
Sbjct: 205 ARLLGAACVIVG-DQNPERLKLLSDAGF 231

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} Length = 795

 Score = 89.8 bits (223), Expect = 8e-20
 Identities = 49/209 (23%), Positives = 71/209 (33%), Gaps = 51/209 (24%)

Query: 33  GAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVG 92
           G  +V I +   G+   D       LGM       G E  G V E G  V+    GD+V 
Sbjct: 237 GDGEVRIAMRAAGVNFRDAL---IALGMYPGVASLGSEGAGVVVETGPGVTGLAPGDRV- 292

Query: 93  VGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDG 152
               +G                                    F    V D + V +IP G
Sbjct: 293 ----MGMIP-------------------------------KAFGPLAVADHRMVTRIPAG 317

Query: 153 MALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGG--IL---GLGGVGHMGVLIAKAMGHHV 207
            +  +AA +    +T +  L        GLR G  +L     GGVG   + +A+ +G  V
Sbjct: 318 WSFARAASVPIVFLTAYYALVDLA----GLRPGESLLVHSAAGGVGMAAIQLARHLGAEV 373

Query: 208 TVISSSDKKRVEAMEHLGADQYLVSSDAT 236
              +S DK +  A+E L  +    S    
Sbjct: 374 YATASEDKWQ--AVE-LSREHLASSRTCD 399

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* Length = 334

 Score = 85.0 bits (211), Expect = 1e-18
 Identities = 51/216 (23%), Positives = 83/216 (38%), Gaps = 61/216 (28%)

Query: 33  GAEDVYIKVLYCGICHTDIHQIKNDLGM--SNYPMVPGHEVVGEVKEVGSEVSNFKVGDK 90
             E++ IK  Y G+ + + +  K   G+     P V G E  G V   G  V+NF+VGD+
Sbjct: 34  SEEELLIKNKYTGVNYIESYFRK---GIYPCEKPYVLGREASGTVVAKGKGVTNFEVGDQ 90

Query: 91  VGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAE-SMVVDQKFVVKI 149
           V                     Y                 +   FA+ S +  Q  V+K+
Sbjct: 91  VA--------------------YI----------------SNSTFAQYSKISSQGPVMKL 114

Query: 150 PDGMALEQ---AAPLLCAGVTVFSPLSHFGLKQSG-LRGG--IL---GLGGVGHMGVLIA 200
           P G + E+    A  L   +T           ++  ++ G  +L     GGVG +   + 
Sbjct: 115 PKGTSDEELKLYAAGLLQVLTA-----LSFTNEAYHVKKGDYVLLFAAAGGVGLILNQLL 169

Query: 201 KAMGHHVTVIS--SSDKKRVEAMEHLGADQYLVSSD 234
           K  G     I+  S+D+K   A E+ GA+  + +S 
Sbjct: 170 KMKG--AHTIAVASTDEKLKIAKEY-GAEYLINASK 202

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha} Length = 379

 Score = 81.5 bits (201), Expect = 2e-17
 Identities = 30/239 (12%), Positives = 61/239 (25%), Gaps = 51/239 (21%)

Query: 64  PMVPGHEVVGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYND 123
            M  G+E  G V E GS  +   +  K  V  + G                         
Sbjct: 91  SMPVGNEGAGVVVEAGSSPAAQALMGKT-VAAIGG------------------------- 124

Query: 124 VYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLR 183
                      +++   +     + +P+G      A      +T         ++   L 
Sbjct: 125 ---------AMYSQYRCIPADQCLVLPEGATPADGASSFVNPLTA-----LGMVETMRLE 170

Query: 184 GG--IL---GLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSD---A 235
           G   ++       +G M   I    G  +  I    ++  + ++  GA     ++     
Sbjct: 171 GHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQ-ADLLKAQGAVHVCNAASPTFM 229

Query: 236 TRMQEAADS--LDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGR 292
             + EA  S       D           L+ ++                    + + G 
Sbjct: 230 QDLTEALVSTGATIAFDATGGGKLGGQILTCMEAALNKSAREYSRYGSTTHKQVYLYGG 288

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A* Length = 324

 Score = 77.0 bits (190), Expect = 4e-16
 Identities = 69/352 (19%), Positives = 118/352 (33%), Gaps = 94/352 (26%)

Query: 36  DVYIKVLYCGICHTDIHQIKNDLGMS-NYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVG 94
           DV + V +  + + D   I     +  ++PM+PG +  G V    SE   F  G +V   
Sbjct: 29  DVTVDVHWSSLNYKDALAITGKGKIIRHFPMIPGIDFAGTVHA--SEDPRFHAGQEV--- 83

Query: 95  VLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMA 154
           +L G                         V   G+   GG AE   V   ++V +P G++
Sbjct: 84  LLTGW-----------------------GV---GENHWGGLAERARVKGDWLVALPAGLS 117

Query: 155 LEQAAPLLCAGVTVFSPLSHFGLKQSGLR---GGIL---GLGGVGHMGVLIAKAMGHHVT 208
              A  +  AG T  + L    L+ +G+R   G ++     GGVG   V +   +G+ V 
Sbjct: 118 SRNAMIIGTAGFT--AMLCVMALEDAGIRPQDGEVVVTGASGGVGSTAVALLHKLGYQVA 175

Query: 209 VISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSL-----DYIIDTVPANHPLEPYLS 263
            +S  +      ++ LGA++ L   +       +  L        IDTV  +  L   L+
Sbjct: 176 AVSGRESTH-GYLKSLGANRILSRDEF----AESRPLEKQLWAGAIDTV-GDKVLAKVLA 229

Query: 264 LLKLDGKL------------------ILTGV-------INTPMQFLTPMVMLGRKAITGS 298
            +   G +                  IL  V       + TP           R      
Sbjct: 230 QMNYGGCVAACGLAGGFALPTTVMPFILRNVRLQGVDSVMTPPAR--------RAEAWAR 281

Query: 299 FIGSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDV 350
            +  +   +                 I +    K  + +  N V+ R +V +
Sbjct: 282 LVKDLP--ESFYA--------QAATEITLADAPKFADAIINNQVQGRTLVKI 323

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 Length = 328

 Score = 74.3 bits (183), Expect = 4e-15
 Identities = 75/351 (21%), Positives = 127/351 (36%), Gaps = 89/351 (25%)

Query: 36  DVYIKVLYCGICHTDIHQIKNDLGMS-NYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVG 94
           DV ++V Y  + + D      D  +   YP VPG ++ G V    S+   F+ GD+V   
Sbjct: 32  DVLVRVHYSSVNYKDGLASIPDGKIVKTYPFVPGIDLAGVVVS--SQHPRFREGDEV--- 86

Query: 95  VLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMA 154
           +  G                        ++   G    GG++E   +  +++V +P G+ 
Sbjct: 87  IATGY-----------------------EI---GVTHFGGYSEYARLHGEWLVPLPKGLT 120

Query: 155 LEQAAPLLCAGVT-VFSPLSHFGLKQSGLRGGIL---GLGGVGHMGVLIAKAMGHHVTVI 210
           L++A  +  AG T   S         +  RG +L     GGVG + V +    G+ V   
Sbjct: 121 LKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEAS 180

Query: 211 SSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSL-----DYIIDTVPANHPLEPYLSLL 265
           +    +  + +  LGA + L   D   M E    L        +D V     L   LS +
Sbjct: 181 TGKAAEH-DYLRVLGAKEVLAREDV--MAERIRPLDKQRWAAAVDPV-GGRTLATVLSRM 236

Query: 266 KLDG-----------KL-------ILTGV-------INTPMQFLTPMVMLGRKAITGSFI 300
           +  G           ++       IL GV       +  PM          R  I     
Sbjct: 237 RYGGAVAVSGLTGGAEVPTTVHPFILRGVSLLGIDSVYCPMDL--------RLRIWERLA 288

Query: 301 GSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVA 351
           G +K   E            + + I +  + +A +R+ + ++R R VV +A
Sbjct: 289 GDLKPDLE-----------RIAQEISLAELPQALKRILRGELRGRTVVRLA 328

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A* Length = 330

 Score = 72.0 bits (177), Expect = 3e-14
 Identities = 51/229 (22%), Positives = 84/229 (36%), Gaps = 48/229 (20%)

Query: 36  DVYIKVLYCGICHTDIHQIKNDLGMS-NYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVG 94
            V IKV Y GI + D    K    +   YP++ G +  G V    S    F  GD+V   
Sbjct: 33  GVLIKVAYSGINYKDGLAGKAGGNIVREYPLILGIDAAGTVVS--SNDPRFAEGDEV--- 87

Query: 95  VLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMA 154
           +                           ++   G    GG +E   V   ++V +P  ++
Sbjct: 88  IATSY-----------------------EL---GVSRDGGLSEYASVPGDWLVPLPQNLS 121

Query: 155 LEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGIL------GLGGVGHMGVLIAKAMGHHVT 208
           L++A     AG T  + LS   L+Q+GL             GGVG + V +    G+ V 
Sbjct: 122 LKEAMVYGTAGFT--AALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVV 179

Query: 209 VISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSL-----DYIIDTV 252
             + + +   + ++ LGA + +   D         +L        +D V
Sbjct: 180 ASTGNREAA-DYLKQLGASEVISREDV--YDGTLKALSKQQWQGAVDPV 225

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Length = 2512

 Score = 65.7 bits (160), Expect = 1e-11
 Identities = 44/258 (17%), Positives = 81/258 (31%), Gaps = 56/258 (21%)

Query: 28   TLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKV 87
                   +D    V Y  +   D+       G  +   +PG  +  +             
Sbjct: 1553 YALPASCQDRLCSVYYTSLNFRDV---MLATGKLSPDSIPGKWLTRDCMLGMEFSGRDAS 1609

Query: 88   GDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVV 147
            G +V +G++                                     G A S+++ Q    
Sbjct: 1610 GRRV-MGMVPA----------------------------------EGLATSVLLLQHATW 1634

Query: 148  KIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGG--IL---GLGGVGHMGVLIAKA 202
            ++P    LE+AA +     T +  L   G     ++ G  +L   G GGVG   + IA +
Sbjct: 1635 EVPSTWTLEEAASVPIVYTTAYYSLVVRG----RMQPGESVLIHSGSGGVGQAAIAIALS 1690

Query: 203  MGHHVTVISSSDKKR---VEAMEHLGADQYLVSSD---ATRMQEAADS--LDYIIDTVPA 254
             G  V     S +KR         L    +  S D      +        +D +++++ A
Sbjct: 1691 RGCRVFTTVGSAEKRAYLQARFPQLDETCFANSRDTSFEQHVLRHTAGKGVDLVLNSL-A 1749

Query: 255  NHPLEPYLSLLKLDGKLI 272
               L+  +  L   G+ +
Sbjct: 1750 EEKLQASVRCLAQHGRFL 1767

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 Length = 198

 Score = 52.2 bits (126), Expect = 3e-08
 Identities = 31/89 (34%), Positives = 41/89 (46%), Gaps = 10/89 (11%)

Query: 144 KFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGG--IL---GLGGVGHMGVL 198
             VV IPD +A  +AA    A +T +  L   G     L  G  +L     GGVG   V 
Sbjct: 2   DLVVPIPDTLADNEAATFGVAYLTAWHSLCEVG----RLSPGERVLIHSATGGVGMAAVS 57

Query: 199 IAKAMGHHVTVISSSDKKRVEAMEHLGAD 227
           IAK +G  +   + SD KR E +  LG +
Sbjct: 58  IAKMIGARIYTTAGSDAKR-EMLSRLGVE 85

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans} Length = 293

 Score = 44.6 bits (105), Expect = 2e-05
 Identities = 19/74 (25%), Positives = 31/74 (41%), Gaps = 5/74 (6%)

Query: 181 GLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQE 240
           G    +LGLG VG        A+G  V V +          E +G + + +S    +  +
Sbjct: 155 GANVAVLGLGRVGMSVARKFAALGAKVKVGARESDLLARIAE-MGMEPFHIS----KAAQ 209

Query: 241 AADSLDYIIDTVPA 254
               +D  I+T+PA
Sbjct: 210 ELRDVDVCINTIPA 223

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis} Length = 300

 Score = 43.2 bits (102), Expect = 6e-05
 Identities = 16/69 (23%), Positives = 27/69 (39%), Gaps = 5/69 (7%)

Query: 186 ILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSL 245
           +LGLG  G        A+G +V V + S        E      +        ++E    +
Sbjct: 162 VLGLGRTGMTIARTFAALGANVKVGARSSAHLARITEMGLVPFHT-----DELKEHVKDI 216

Query: 246 DYIIDTVPA 254
           D  I+T+P+
Sbjct: 217 DICINTIPS 225

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} Length = 286

 Score = 41.0 bits (96), Expect = 3e-04
 Identities = 13/91 (14%), Positives = 31/91 (34%), Gaps = 5/91 (5%)

Query: 186 ILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSL 245
             G G    +        G  +   S +   ++EA+   GA+  L   +    + + D +
Sbjct: 10  SFGHGYTARVLSRALAPQGWRIIGTSRN-PDQMEAIRASGAEPLLWPGE----EPSLDGV 64

Query: 246 DYIIDTVPANHPLEPYLSLLKLDGKLILTGV 276
            +++ +   +   +P L+ L           
Sbjct: 65  THLLISTAPDSGGDPVLAALGDQIAARAAQF 95

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A* Length = 215

 Score = 39.9 bits (93), Expect = 5e-04
 Identities = 22/103 (21%), Positives = 34/103 (33%), Gaps = 10/103 (9%)

Query: 185 GILGLGGVGH-MGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAAD 243
           GILG G     +   +  + G  V V S + K+                   T  +EA  
Sbjct: 32  GILGSGDFARSLATRLVGS-GFKVVVGSRNPKRTARLFPSAAQ--------VTFQEEAVS 82

Query: 244 SLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTP 286
           S + I   V   H         +L GK+++     T  + L  
Sbjct: 83  SPEVIFVAVFREHYSSLCSLSDQLAGKILVDVSNPTEQEHLQH 125

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	357
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	100.0
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	100.0
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	100.0
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	100.0
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	100.0
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	100.0
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	100.0
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	100.0
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	100.0
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	100.0
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	100.0
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	100.0
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	100.0
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	100.0
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	100.0
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	100.0
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	100.0
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	100.0
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	100.0
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	100.0
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	100.0
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	100.0
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	100.0
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	100.0
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	100.0
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	100.0
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	100.0
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	100.0
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	100.0
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	100.0
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	100.0
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	100.0
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	100.0
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	100.0
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	100.0
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	100.0
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	100.0
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	100.0
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	100.0
4eye_A	342	Probable oxidoreductase; structural genomics, niai	100.0
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	100.0
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	100.0
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	100.0
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	100.0
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	100.0
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	100.0
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	100.0
3gms_A	340	Putative NADPH:quinone reductase; structural genom	100.0
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	100.0
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	100.0
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	100.0
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	100.0
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	100.0
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	100.0
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	100.0
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	100.0
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	100.0
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	100.0
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	100.0
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	100.0
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	100.0
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	100.0
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	100.0
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	100.0
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	100.0
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	100.0
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	100.0
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	100.0
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	100.0
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	100.0
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	99.86
2yvl_A	248	TRMI protein, hypothetical protein; tRNA, methyltr	99.06
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	98.99
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	98.94
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	98.94
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.94
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	98.92
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	98.72
3ce6_A	494	Adenosylhomocysteinase; protein-substrate complex,	98.6
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	98.55
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	98.49
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	98.45
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	98.25
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	98.23
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	98.13
1p91_A	269	Ribosomal RNA large subunit methyltransferase A; R	98.12
3gvp_A	435	Adenosylhomocysteinase 3; protein CO-factor comple	98.11
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	98.06
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	98.04
1o54_A	277	SAM-dependent O-methyltransferase; TM0748, structu	97.95
3n58_A	464	Adenosylhomocysteinase; ssgcid, hydrolase, structu	97.93
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	97.92
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.92
3h9u_A	436	Adenosylhomocysteinase; NAD CO-factor complex, str	97.85
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	97.84
3fpf_A	298	Mtnas, putative uncharacterized protein; thermonic	97.83
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	97.8
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	97.76
2b25_A	336	Hypothetical protein; structural genomics, methyl	97.76
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.68
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	97.64
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	97.64
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	97.63
1i9g_A	280	Hypothetical protein RV2118C; mtase, adoMet, cryst	97.62
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.59
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	97.58
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	97.57
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	97.57
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	97.57
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.56
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	97.51
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	97.49
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.49
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	97.49
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	97.49
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	97.49
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	97.48
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	97.48
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	97.46
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	97.45
3mb5_A	255	SAM-dependent methyltransferase; RNA methyltransfe	97.45
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	97.45
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	97.44
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	97.43
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	97.43
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	97.42
4dqx_A	277	Probable oxidoreductase protein; structural genomi	97.41
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	97.41
3njr_A	204	Precorrin-6Y methylase; methyltransferase, decarbo	97.41
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	97.41
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	97.4
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	97.4
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	97.39
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	97.39
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	97.39
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	97.39
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	97.38
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	97.37
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.35
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	97.35
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	97.35
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	97.35
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	97.35
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	97.34
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	97.34
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	97.34
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	97.33
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	97.33
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	97.32
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	97.32
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	97.31
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	97.31
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	97.31
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	97.3
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	97.3
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	97.3
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	97.3
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	97.3
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	97.29
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	97.29
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	97.28
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	97.28
3imf_A	257	Short chain dehydrogenase; structural genomics, in	97.28
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	97.27
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	97.27
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.26
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	97.26
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	97.26
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	97.25
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	97.25
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	97.25
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	97.24
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	97.24
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	97.23
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	97.23
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	97.23
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	97.22
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	97.22
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	97.22
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	97.22
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	97.21
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	97.21
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	97.21
1v8b_A	479	Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2	97.21
3d64_A	494	Adenosylhomocysteinase; structural genomics, ssgci	97.21
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	97.21
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	97.2
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	97.19
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	97.18
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	97.18
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	97.17
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	97.17
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	97.17
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	97.17
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	97.16
3hm2_A	178	Precorrin-6Y C5,15-methyltransferase; alpha-beta-s	97.16
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	97.16
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	97.15
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	97.15
1spx_A	278	Short-chain reductase family member (5L265); paral	97.15
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	97.13
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	97.12
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	97.12
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	97.12
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	97.11
3dfz_A	223	SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase	97.11
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	97.11
3lbf_A	210	Protein-L-isoaspartate O-methyltransferase; modifi	97.11
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	97.11
2yxe_A	215	Protein-L-isoaspartate O-methyltransferase; rossma	97.11
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	97.11
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	97.1
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	97.1
3rih_A	293	Short chain dehydrogenase or reductase; structural	97.1
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	97.1
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	97.1
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	97.1
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	97.1
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	97.09
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	97.09
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	97.09
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	97.08
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	97.08
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	97.08
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	97.08
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	97.07
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	97.07
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	97.07
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	97.07
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	97.07
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	97.06
1wwk_A	307	Phosphoglycerate dehydrogenase; riken structural g	97.06
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	97.06
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	97.06
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	97.06
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	97.06
1xq6_A	253	Unknown protein; structural genomics, protein stru	97.05
3l07_A	285	Bifunctional protein fold; structural genomics, ID	97.04
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	97.04
4df3_A	233	Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase;	97.03
2pbf_A	227	Protein-L-isoaspartate O-methyltransferase beta-A	97.03
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	97.02
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	97.02
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	97.02
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	97.01
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	97.01
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	97.01
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	97.01
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	97.0
3cxt_A	291	Dehydrogenase with different specificities; rossma	96.99
1jg1_A	235	PIMT;, protein-L-isoaspartate O-methyltransferase;	96.99
1xq1_A	266	Putative tropinone reducatse; structural genomics,	96.99
1xhl_A	297	Short-chain dehydrogenase/reductase family member	96.98
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	96.98
1xkq_A	280	Short-chain reductase family member (5D234); parra	96.97
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	96.97
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	96.97
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	96.97
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	96.96
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	96.96
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	96.96
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	96.95
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	96.94
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	96.94
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	96.93
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	96.92
1a4i_A	301	Methylenetetrahydrofolate dehydrogenase / methenyl	96.92
3e05_A	204	Precorrin-6Y C5,15-methyltransferase (decarboxyla;	96.92
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	96.92
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	96.92
2g76_A	335	3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidor	96.91
1i1n_A	226	Protein-L-isoaspartate O-methyltransferase; S-aden	96.91
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	96.91
1r18_A	227	Protein-L-isoaspartate(D-aspartate)-O-methyltrans;	96.91
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	96.91
2gpy_A	233	O-methyltransferase; structural genomics, PSI, pro	96.9
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	96.9
1npy_A	271	Hypothetical shikimate 5-dehydrogenase-like protei	96.9
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	96.88
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	96.87
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	96.87
2ekl_A	313	D-3-phosphoglycerate dehydrogenase; structural gen	96.87
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	96.87
2d5c_A	263	AROE, shikimate 5-dehydrogenase; substrate, dimer,	96.87
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	96.86
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	96.85
1id1_A	153	Putative potassium channel protein; RCK domain, E.	96.83
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	96.83
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	96.83
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	96.83
3jtm_A	351	Formate dehydrogenase, mitochondrial; mitochondrio	96.83
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	96.83
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	96.82
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	96.82
2j6i_A	364	Formate dehydrogenase; oxidoreductase, D-specific-	96.81
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	96.81
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	96.81
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	96.8
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	96.8
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	96.8
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	96.79
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	96.79
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	96.77
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	96.77
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	96.77
1c1d_A	355	L-phenylalanine dehydrogenase; amino acid dehydrog	96.76
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	96.76
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	96.76
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	96.75
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	96.75
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	96.75
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	96.74
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	96.74
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	96.74
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	96.73
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	96.73
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	96.72
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	96.72
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	96.72
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	96.72
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	96.71
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	96.71
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	96.71
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	96.71
3m33_A	226	Uncharacterized protein; structural genomics, PSI-	96.7
1vl6_A	388	Malate oxidoreductase; TM0542, NAD-dependent malic	96.69
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	96.69
3gg9_A	352	D-3-phosphoglycerate dehydrogenase oxidoreductase;	96.69
1b0a_A	288	Protein (fold bifunctional protein); folate, dehyd	96.68
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	96.67
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	96.67
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	96.67
2c2x_A	281	Methylenetetrahydrofolate dehydrogenase- methenylt	96.66
2nac_A	393	NAD-dependent formate dehydrogenase; oxidoreductas	96.66
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	96.65
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	96.64
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	96.63
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	96.62
3ujc_A	266	Phosphoethanolamine N-methyltransferase; parasite;	96.61
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	96.61
3eey_A	197	Putative rRNA methylase; rRNA methylation, S-adeno	96.61
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	96.6
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	96.59
3cea_A	346	MYO-inositol 2-dehydrogenase; NP_786804.1, oxidore	96.59
3hem_A	302	Cyclopropane-fatty-acyl-phospholipid synthase 2; p	96.59
3grz_A	205	L11 mtase, ribosomal protein L11 methyltransferase	96.59
2hnk_A	239	SAM-dependent O-methyltransferase; modified rossma	96.58
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	96.58
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	96.58
1omo_A	322	Alanine dehydrogenase; two-domain, beta-sandwich-d	96.57
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	96.57
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	96.56
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	96.56
4e5n_A	330	Thermostable phosphite dehydrogenase; D-2-hydroxya	96.56
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	96.56
3mti_A	185	RRNA methylase; SAM-dependent, PSI, MCSG, structur	96.55
2avd_A	229	Catechol-O-methyltransferase; structural genomics,	96.55
1vbf_A	231	231AA long hypothetical protein-L-isoaspartate O-	96.54
2dbq_A	334	Glyoxylate reductase; D-3-phosphoglycerate dehydro	96.54
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	96.53
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	96.53
2pwy_A	258	TRNA (adenine-N(1)-)-methyltransferase; mtase, ado	96.51
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	96.51
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	96.51
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	96.5
1gdh_A	320	D-glycerate dehydrogenase; oxidoreductase(CHOH (D)	96.5
2nxc_A	254	L11 mtase, ribosomal protein L11 methyltransferase	96.48
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	96.47
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	96.47
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	96.47
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	96.46
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	96.46
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	96.45
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	96.45
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	96.45
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	96.45
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	96.44
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	96.44
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	96.43
4hy3_A	365	Phosphoglycerate oxidoreductase; PSI-biology, stru	96.42
2fk8_A	318	Methoxy mycolic acid synthase 4; S-adenosylmethion	96.42
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	96.41
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	96.41
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	96.4
1fbn_A	230	MJ fibrillarin homologue; MJ proteins, ribosomal R	96.36
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	96.36
1iy9_A	275	Spermidine synthase; rossmann fold, structural gen	96.35
1nkv_A	256	Hypothetical protein YJHP; structural genomics, PS	96.35
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	96.35
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	96.35
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	96.35
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	96.33
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	96.32
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	96.32
2i99_A	312	MU-crystallin homolog; thyroid hormine binding pro	96.3
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	96.3
2glx_A	332	1,5-anhydro-D-fructose reductase; NADP(H) dependen	96.3
3db2_A	354	Putative NADPH-dependent oxidoreductase; two domai	96.29
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	96.29
2d0i_A	333	Dehydrogenase; structural genomics, NPPSFA, nation	96.26
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	96.26
2w2k_A	348	D-mandelate dehydrogenase; 2-hydroxyacid dehydroge	96.26
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	96.26
2gcg_A	330	Glyoxylate reductase/hydroxypyruvate reductase; NA	96.24
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	96.24
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	96.24
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	96.24
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	96.24
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	96.22
2gb4_A	252	Thiopurine S-methyltransferase; 18204406, thiopuri	96.21
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	96.21
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	96.2
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	96.2
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	96.2
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	96.18
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	96.18
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	96.18
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	96.17
3dr5_A	221	Putative O-methyltransferase; Q8NRD3, CGL1119, PF0	96.17
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	96.16
4hkt_A	331	Inositol 2-dehydrogenase; structural genomics, nys	96.13
1dl5_A	317	Protein-L-isoaspartate O-methyltransferase; isoasp	96.12
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	96.11
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	96.11
3cbg_A	232	O-methyltransferase; cyanobacterium; HET: SAH FER	96.1
1kpg_A	287	CFA synthase;, cyclopropane-fatty-acyl-phospholipi	96.1
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	96.09
3tfw_A	248	Putative O-methyltransferase; PSI-biology, nysgrc,	96.08
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	96.08
1mx3_A	347	CTBP1, C-terminal binding protein 1; nuclear prote	96.06
1vpd_A	299	Tartronate semialdehyde reductase; structural geno	96.06
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	96.05
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	96.04
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	96.03
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	96.02
2ahr_A	259	Putative pyrroline carboxylate reductase; pyrrolin	96.02
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	96.01
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	96.0
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	95.98
3orh_A	236	Guanidinoacetate N-methyltransferase; structura ge	95.98
3vc1_A	312	Geranyl diphosphate 2-C-methyltransferase; rossman	95.98
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	95.97
2g5c_A	281	Prephenate dehydrogenase; TYRA, oxidoreductase; HE	95.96
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	95.95
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	95.95
3gvx_A	290	Glycerate dehydrogenase related protein; NYSGXRC,	95.93
1pjz_A	203	Thiopurine S-methyltransferase; polymorphism, S-ad	95.92
1j4a_A	333	D-LDH, D-lactate dehydrogenase; NAD-dependent dehy	95.9
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	95.88
4g2n_A	345	D-isomer specific 2-hydroxyacid dehydrogenase, Na;	95.86
3rc1_A	350	Sugar 3-ketoreductase; sugar biosynthesis, TDP bin	95.85
4e4y_A	244	Short chain dehydrogenase family protein; structur	95.85
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	95.83
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	95.82
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	95.81
1mjf_A	281	Spermidine synthase; spermidine synthetase, struct	95.81
2pi1_A	334	D-lactate dehydrogenase; oxidoreductase, D-LDH, NA	95.8
3euw_A	344	MYO-inositol dehydrogenase; protein structure init	95.8
2f1k_A	279	Prephenate dehydrogenase; tyrosine synthesis, X-RA	95.8
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	95.79
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	95.79
1g8a_A	227	Fibrillarin-like PRE-rRNA processing protein; rRNA	95.78
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	95.78
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	95.77
1l3i_A	192	Precorrin-6Y methyltransferase/putative decarboxyl	95.77
2b2c_A	314	Spermidine synthase; beta-alpha, transferase; 2.50	95.75
1uir_A	314	Polyamine aminopropyltransferase; spermidien synth	95.74
3tri_A	280	Pyrroline-5-carboxylate reductase; amino acid bios	95.74
1sui_A	247	Caffeoyl-COA O-methyltransferase; rossmann fold, p	95.73
3q2i_A	354	Dehydrogenase; rossmann fold, UDP-sugar binding, N	95.73
2p35_A	259	Trans-aconitate 2-methyltransferase; SAM dependent	95.72
2o07_A	304	Spermidine synthase; structural genomics, structur	95.72
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	95.72
3f4k_A	257	Putative methyltransferase; structural genomics, P	95.72
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	95.71
2a9f_A	398	Putative malic enzyme ((S)-malate:NAD+ oxidoreduct	95.71
3ezy_A	344	Dehydrogenase; structural genomics, unknown functi	95.7
3adn_A	294	Spermidine synthase; aminopropyltransferase, polya	95.68
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	95.67
3ou2_A	218	SAM-dependent methyltransferase; O-methyltransfera	95.64
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	95.64
3ktd_A	341	Prephenate dehydrogenase; structural genomics, joi	95.63
3pdu_A	287	3-hydroxyisobutyrate dehydrogenase family protein;	95.62
3gjy_A	317	Spermidine synthase; APC62791, structural genomics	95.62
3bwc_A	304	Spermidine synthase; SAM, SGPP, structura genomics	95.62
1inl_A	296	Spermidine synthase; beta-barrel, rossman fold, st	95.62
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	95.61
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	95.61
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	95.58
3evz_A	230	Methyltransferase; NYSGXRC, NEW YORK SGX research	95.57
2i7c_A	283	Spermidine synthase; transferase, structural genom	95.56
3tr6_A	225	O-methyltransferase; cellular processes; HET: SAH;	95.55
1yb2_A	275	Hypothetical protein TA0852; structural genomics,	95.54
3evt_A	324	Phosphoglycerate dehydrogenase; structural genomic	95.52
2uyy_A	316	N-PAC protein; long-chain dehydrogenase, cytokine;	95.52
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	95.52
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	95.51
2nyu_A	196	Putative ribosomal RNA methyltransferase 2; SAM, s	95.5
3e9m_A	330	Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA,	95.49
3pp8_A	315	Glyoxylate/hydroxypyruvate reductase A; structural	95.46

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=100.00  E-value=6.9e-62  Score=451.62  Aligned_cols=352  Identities=78%  Similarity=1.301  Sum_probs=310.3

Q ss_pred             CCCchhhhheeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCC
Q 018382            1 MGSLDTERATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGS   80 (357)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~   80 (357)
                      |.-|.++|+|+++...++++.++++++|.|+|+++||||||.++++|++|++++.|.++...+|.++|||++|+|+++|+
T Consensus         1 ~~~m~~~m~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G~V~~vG~   80 (357)
T 2cf5_A            1 MGIMEAERKTTGWAARDPSGILSPYTYTLRETGPEDVNIRIICCGICHTDLHQTKNDLGMSNYPMVPGHEVVGEVVEVGS   80 (357)
T ss_dssp             -----CCCEEEEEEECSTTCCEEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHTCTTTCCCSSBCCCCEEEEEEEEECS
T ss_pred             CccccCcceeEEEEEccCCCCcEEEEecCCCCCCCEEEEEEEEEeecchhhhhhcCCCCCCCCCeecCcceeEEEEEECC
Confidence            34456789999999988788999999999999999999999999999999999998776556899999999999999999


Q ss_pred             CCCCCCCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCcccccc
Q 018382           81 EVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAP  160 (357)
Q Consensus        81 ~v~~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~  160 (357)
                      ++++|++||||++.+...+||.|..|+.|.++.|+...+.+.+.+..|...+|+|+||++++++.++++|+++++++||+
T Consensus        81 ~v~~~~vGdrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~ls~~~aa~  160 (357)
T 2cf5_A           81 DVSKFTVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWSYNDVYINGQPTQGGFAKATVVHQKFVVKIPEGMAVEQAAP  160 (357)
T ss_dssp             SCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCTTSCBCCCSSBSCEEEEGGGEEECCSSCCHHHHTG
T ss_pred             CCCCCCCCCEEEEcCCCCCCCCChHHhCcCcccCCCccccccccccCCCCCCCccccEEEechhhEEECcCCCCHHHhhh
Confidence            99999999999877777789999999999999997665444333334445689999999999999999999999999999


Q ss_pred             ccchhhhhhhhhhccCCCC-CCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHH
Q 018382          161 LLCAGVTVFSPLSHFGLKQ-SGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQ  239 (357)
Q Consensus       161 ~~~~~~ta~~~l~~~~~~~-~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~  239 (357)
                      +++++.|||+++..... + +|++|||+|+|++|++++|+|+..|++|+++++++++++.+++++|+++++++++.+.+.
T Consensus       161 l~~~~~ta~~~l~~~~~-~~~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~  239 (357)
T 2cf5_A          161 LLCAGVTVYSPLSHFGL-KQPGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYVIGSDQAKMS  239 (357)
T ss_dssp             GGTHHHHHHHHHHHTST-TSTTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCCSCEEETTCHHHHH
T ss_pred             hhhhHHHHHHHHHhcCC-CCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCCceeeccccHHHHH
Confidence            99999999999987665 7 999999999999999999999999999999999999988888459999999988776677


Q ss_pred             HhhCCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCcc-cchHHHhhccceEEEEeecCHHHHHHHHHHHHhcCC
Q 018382          240 EAADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQ-FLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGV  318 (357)
Q Consensus       240 ~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~-~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l  318 (357)
                      ++.+++|+|||++|....++.++++++++|+++.+|....... ++.. ++.+++++.|++.+..+++++++++++++++
T Consensus       240 ~~~~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~-~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l  318 (357)
T 2cf5_A          240 ELADSLDYVIDTVPVHHALEPYLSLLKLDGKLILMGVINNPLQFLTPL-LMLGRKVITGSFIGSMKETEEMLEFCKEKGL  318 (357)
T ss_dssp             HSTTTEEEEEECCCSCCCSHHHHTTEEEEEEEEECSCCSSCCCCCHHH-HHHHTCEEEECCSCCHHHHHHHHHHHHHTTC
T ss_pred             HhcCCCCEEEECCCChHHHHHHHHHhccCCEEEEeCCCCCCccccCHH-HHhCccEEEEEccCCHHHHHHHHHHHHcCCC
Confidence            7777999999999986578999999999999999987654433 4555 7789999999998888899999999999999


Q ss_pred             CccEEEeecccHHHHHHHHHcCCccEEEEEecCCCc
Q 018382          319 TSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGSK  354 (357)
Q Consensus       319 ~~~i~~~~~~~~~~a~~~~~~~~~~Gkvvi~~~~~~  354 (357)
                      ++.+++|+++++++||+.+++++..||++++++++.
T Consensus       319 ~~~~~~~~l~~~~~A~~~~~~~~~~gKvvi~~~~~~  354 (357)
T 2cf5_A          319 SSIIEVVKMDYVNTAFERLEKNDVRYRFVVDVEGSN  354 (357)
T ss_dssp             CCCEEEEEGGGHHHHHHHHHTTCSSSEEEEETTSCC
T ss_pred             CCceEEEeHHHHHHHHHHHHCCCCceEEEEeCCccc
Confidence            988899999999999999999998899999997653

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=100.00  E-value=8.3e-61  Score=443.12  Aligned_cols=340  Identities=36%  Similarity=0.736  Sum_probs=301.9

Q ss_pred             hhheeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCC
Q 018382            7 ERATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFK   86 (357)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~   86 (357)
                      +|+|++++..+.+++++++++|.|+|+++||||||+++++|++|++++.|.++...+|.++|||++|+|+++|+++++|+
T Consensus         2 ~m~mka~~~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~i~G~E~~G~V~~vG~~v~~~~   81 (348)
T 3two_A            2 RVQSKGFAIFSKDEHFKPHDFSRHAVGPRDVLIDILYAGICHSDIHSAYSEWKEGIYPMIPGHEIAGIIKEVGKGVKKFK   81 (348)
T ss_dssp             CEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHTTSSSCCCSSBCCCCCEEEEEEEECTTCCSCC
T ss_pred             ceEEEEEEEccCCCCCeEEEeeCCCCCCCeEEEEEEEeeecccchhhhcCCCCCCCCCeecCcceeEEEEEECCCCCCCC
Confidence            36899999887778899999999999999999999999999999999999887778899999999999999999999999


Q ss_pred             CCCEEEEccccCCCCCCcccccCcccccccccccCcc--ccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccch
Q 018382           87 VGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYND--VYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCA  164 (357)
Q Consensus        87 ~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~  164 (357)
                      +||||++.+....||.|.+|+.|.++.|......+..  ....+....|+|+||++++++.++++|+++++++||+++++
T Consensus        82 vGdrV~~~~~~~~Cg~C~~C~~g~~~~c~~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~  161 (348)
T 3two_A           82 IGDVVGVGCFVNSCKACKPCKEHQEQFCTKVVFTYDCLDSFHDNEPHMGGYSNNIVVDENYVISVDKNAPLEKVAPLLCA  161 (348)
T ss_dssp             TTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSSEEGGGTTEECCCSSBSEEEEEGGGCEECCTTSCHHHHGGGGTH
T ss_pred             CCCEEEEeCCcCCCCCChhHhCCCcccCcccccccccccccccCCcCCccccceEEechhhEEECCCCCCHHHhhhhhhh
Confidence            9999988777778999999999999999822221111  11223335699999999999999999999999999999999


Q ss_pred             hhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCC
Q 018382          165 GVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADS  244 (357)
Q Consensus       165 ~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~  244 (357)
                      +.|||+++... .+++|++|||+|+|++|++++|+|+..|++|+++++++++.+.+++ +|+++++  .+.+.   +..+
T Consensus       162 ~~ta~~~l~~~-~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~-lGa~~v~--~~~~~---~~~~  234 (348)
T 3two_A          162 GITTYSPLKFS-KVTKGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQDALS-MGVKHFY--TDPKQ---CKEE  234 (348)
T ss_dssp             HHHHHHHHHHT-TCCTTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHH-TTCSEEE--SSGGG---CCSC
T ss_pred             HHHHHHHHHhc-CCCCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHh-cCCCeec--CCHHH---HhcC
Confidence            99999999877 5599999999999999999999999999999999999999998888 9999988  33332   2339


Q ss_pred             ccEEEEcCCCCCChHHHHhccccCCeEEEEccCC-CCcc-cchHHHh-hccceEEEEeecCHHHHHHHHHHHHhcCCCcc
Q 018382          245 LDYIIDTVPANHPLEPYLSLLKLDGKLILTGVIN-TPMQ-FLTPMVM-LGRKAITGSFIGSMKETKEMLEFCREKGVTSM  321 (357)
Q Consensus       245 ~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~-~~~~~~~-~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~~  321 (357)
                      +|+|||++|....+..++++++++|+++.+|... .... ++...++ .+++++.|++.++.+++++++++++++.+++.
T Consensus       235 ~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~~~  314 (348)
T 3two_A          235 LDFIISTIPTHYDLKDYLKLLTYNGDLALVGLPPVEVAPVLSVFDFIHLGNRKVYGSLIGGIKETQEMVDFSIKHNIYPE  314 (348)
T ss_dssp             EEEEEECCCSCCCHHHHHTTEEEEEEEEECCCCCGGGCCEEEHHHHHHTCSCEEEECCSCCHHHHHHHHHHHHHTTCCCC
T ss_pred             CCEEEECCCcHHHHHHHHHHHhcCCEEEEECCCCCCCcccCCHHHHHhhCCeEEEEEecCCHHHHHHHHHHHHhCCCCce
Confidence            9999999999878999999999999999998876 4444 6666776 89999999999999999999999999999998


Q ss_pred             EEEeecccHHHHHHHHHcCCccEEEEEecCCC
Q 018382          322 IEVIKMDYVNKAFERLEKNDVRYRFVVDVAGS  353 (357)
Q Consensus       322 i~~~~~~~~~~a~~~~~~~~~~Gkvvi~~~~~  353 (357)
                      +++|+++++++||+.+++++..||+|+++++.
T Consensus       315 ~~~~~l~~~~~A~~~~~~~~~~gKvVi~~~~~  346 (348)
T 3two_A          315 IDLILGKDIDTAYHNLTHGKAKFRYVIDMKKS  346 (348)
T ss_dssp             EEEECGGGHHHHHHHHHTTCCCSEEEEEGGGC
T ss_pred             EEEEEHHHHHHHHHHHHcCCCceEEEEecCCc
Confidence            89999999999999999999999999999654

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=100.00  E-value=6.2e-60  Score=439.76  Aligned_cols=346  Identities=55%  Similarity=0.969  Sum_probs=310.3

Q ss_pred             hhhheeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCC
Q 018382            6 TERATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNF   85 (357)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~   85 (357)
                      .+|++++|..+++++.+++.++|.|+|+++||||||.++++|++|++++.|.++...+|.++|||++|+|+++|++|++|
T Consensus        13 ~~mk~~~~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G~V~~vG~~V~~~   92 (366)
T 1yqd_A           13 HPVKAFGWAARDQSGHLSPFNFSRRATGEEDVRFKVLYCGVCHSDLHSIKNDWGFSMYPLVPGHEIVGEVTEVGSKVKKV   92 (366)
T ss_dssp             SSEEEEEEEECSTTCCEEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHHTSSSCCCSSBCCCCCEEEEEEEECTTCCSC
T ss_pred             CCeeEEEEEEcCCCCCcEEEEccCCCCCCCeEEEEEEEEeechhhHHHHcCCCCCCCCCEecccceEEEEEEECCCCCcC
Confidence            47889999988778889999999999999999999999999999999999877655689999999999999999999999


Q ss_pred             CCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchh
Q 018382           86 KVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAG  165 (357)
Q Consensus        86 ~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~  165 (357)
                      ++||||++.+....||.|..|+.|.++.|+...+.+.+....|...+|+|+||++++++.++++|+++++++||++++++
T Consensus        93 ~vGDrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~ls~~~aa~l~~~~  172 (366)
T 1yqd_A           93 NVGDKVGVGCLVGACHSCESCANDLENYCPKMILTYASIYHDGTITYGGYSNHMVANERYIIRFPDNMPLDGGAPLLCAG  172 (366)
T ss_dssp             CTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEESSSSBCTTSCBCCCSSBSEEEEEGGGCEECCTTSCTTTTGGGGTHH
T ss_pred             CCCCEEEEcCCcCCCCCChhhhCcCcccCCcccccccccccCCCcCCCccccEEEEchhhEEECCCCCCHHHhhhhhhhH
Confidence            99999987776678999999999999999766544433333444568999999999999999999999999999999999


Q ss_pred             hhhhhhhhccCCCC-CCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCC
Q 018382          166 VTVFSPLSHFGLKQ-SGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADS  244 (357)
Q Consensus       166 ~ta~~~l~~~~~~~-~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~  244 (357)
                      .|||+++..... + +|++|||+|+|++|++++|+|+..|++|+++++++++.+.+++++|+++++|+++.+.+.++.++
T Consensus       173 ~ta~~al~~~~~-~~~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~  251 (366)
T 1yqd_A          173 ITVYSPLKYFGL-DEPGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSFLVSRDQEQMQAAAGT  251 (366)
T ss_dssp             HHHHHHHHHTTC-CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCCSEEEETTCHHHHHHTTTC
T ss_pred             HHHHHHHHhcCc-CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCceEEeccCHHHHHHhhCC
Confidence            999999988765 6 99999999999999999999999999999999999998888856999999998887777777779


Q ss_pred             ccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCcccchHHHhhccceEEEEeecCHHHHHHHHHHHHhcCCCccEEE
Q 018382          245 LDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEV  324 (357)
Q Consensus       245 ~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~~i~~  324 (357)
                      +|+|||++|....+..++++++++|+++.+|.......++...++.+++++.+++.+..++++++++++.++++++.+++
T Consensus       252 ~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~~~~~~  331 (366)
T 1yqd_A          252 LDGIIDTVSAVHPLLPLFGLLKSHGKLILVGAPEKPLELPAFSLIAGRKIVAGSGIGGMKETQEMIDFAAKHNITADIEV  331 (366)
T ss_dssp             EEEEEECCSSCCCSHHHHHHEEEEEEEEECCCCSSCEEECHHHHHTTTCEEEECCSCCHHHHHHHHHHHHHTTCCCCEEE
T ss_pred             CCEEEECCCcHHHHHHHHHHHhcCCEEEEEccCCCCCCcCHHHHHhCCcEEEEecCCCHHHHHHHHHHHHcCCCCCceEE
Confidence            99999999986578999999999999999988765556677778889999999988888899999999999999988899


Q ss_pred             eecccHHHHHHHHHcCCccEEEEEecCC
Q 018382          325 IKMDYVNKAFERLEKNDVRYRFVVDVAG  352 (357)
Q Consensus       325 ~~~~~~~~a~~~~~~~~~~Gkvvi~~~~  352 (357)
                      |+++++++||+.+++++..||+|+++++
T Consensus       332 ~~l~~~~~A~~~~~~~~~~gKvvl~~~~  359 (366)
T 1yqd_A          332 ISTDYLNTAMERLAKNDVRYRFVIDVGN  359 (366)
T ss_dssp             ECGGGHHHHHHHHHTTCCSSEEEECHHH
T ss_pred             EcHHHHHHHHHHHHcCCcceEEEEEccc
Confidence            9999999999999999988999998854

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=100.00  E-value=1.3e-60  Score=443.70  Aligned_cols=346  Identities=35%  Similarity=0.599  Sum_probs=304.2

Q ss_pred             hhhhheeeehccCCCCCcceee--eecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCC
Q 018382            5 DTERATIGWAAKDPSGILSPYT--YTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEV   82 (357)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~--~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v   82 (357)
                      ++|++|+++++.+.++++++++  +|.|+|+++||||||+++++|++|++++.|.++...+|.++|||++|+|+++|+++
T Consensus         2 ~~p~~mka~~~~~~~~~l~~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~v~GhE~~G~V~~vG~~v   81 (360)
T 1piw_A            2 SYPEKFEGIAIQSHEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGNMKMPLVVGHEIVGKVVKLGPKS   81 (360)
T ss_dssp             CTTTCEEEEEECCSSSTTSCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTTTSCCCSSEECCCCEEEEEEEECTTC
T ss_pred             CCChheEEEEEecCCCCeeEEeccccCCCCCCCeEEEEEEEeccchhhHHHhcCCCCCCCCCcccCcCceEEEEEeCCCC
Confidence            3577889998875555789999  99999999999999999999999999999977655679999999999999999999


Q ss_pred             C-CCCCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccc
Q 018382           83 S-NFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPL  161 (357)
Q Consensus        83 ~-~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~  161 (357)
                      + +|++||||++.+....||.|.+|+.|.++.|++....+.+....|...+|+|+||++++++.++++|+++++++||++
T Consensus        82 ~~~~~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l  161 (360)
T 1piw_A           82 NSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPIPENIPSHLAAPL  161 (360)
T ss_dssp             CSSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSCBCTTSCBCCCSSBSEEEEEGGGEEECCTTSCHHHHGGG
T ss_pred             CCCCCCCCEEEEecCCCCCCCChhhcCCCcccCcchhhccccccCCCccCCCcceeEEEEchhheEECCCCCCHHHhhhh
Confidence            9 999999998777777899999999999999987511111111223346799999999999999999999999999999


Q ss_pred             cchhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCCh-hHHHH
Q 018382          162 LCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDA-TRMQE  240 (357)
Q Consensus       162 ~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~-~~~~~  240 (357)
                      ++++.|||+++..+ .+++|++|||+|+|++|++++|+|+..|++|+++++++++.+.+++ +|+++++|+++. +..++
T Consensus       162 ~~~~~ta~~~l~~~-~~~~g~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~-lGa~~v~~~~~~~~~~~~  239 (360)
T 1piw_A          162 LCGGLTVYSPLVRN-GCGPGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKREDAMK-MGADHYIATLEEGDWGEK  239 (360)
T ss_dssp             GTHHHHHHHHHHHT-TCSTTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH-HTCSEEEEGGGTSCHHHH
T ss_pred             hhhHHHHHHHHHHc-CCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH-cCCCEEEcCcCchHHHHH
Confidence            99999999999884 5599999999999999999999999999999999999999988887 999999998776 66666


Q ss_pred             hhCCccEEEEcCCC--CCChHHHHhccccCCeEEEEccCCCCc-ccchHHHhhccceEEEEeecCHHHHHHHHHHHHhcC
Q 018382          241 AADSLDYIIDTVPA--NHPLEPYLSLLKLDGKLILTGVINTPM-QFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKG  317 (357)
Q Consensus       241 ~~~~~d~v~d~~g~--~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~  317 (357)
                      +.+++|+|||++|.  ...++.++++++++|+++.+|.... . .++...++.+++++.++..++.++++++++++++++
T Consensus       240 ~~~~~D~vid~~g~~~~~~~~~~~~~l~~~G~iv~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~  318 (360)
T 1piw_A          240 YFDTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQ-HEMLSLKPYGLKAVSISYSALGSIKELNQLLKLVSEKD  318 (360)
T ss_dssp             SCSCEEEEEECCSCSTTCCTTTGGGGEEEEEEEEECCCCCS-SCCEEECGGGCBSCEEEECCCCCHHHHHHHHHHHHHTT
T ss_pred             hhcCCCEEEECCCCCcHHHHHHHHHHhcCCCEEEEecCCCC-ccccCHHHHHhCCeEEEEEecCCHHHHHHHHHHHHhCC
Confidence            66789999999998  5488899999999999999988665 4 455556778999999999888889999999999999


Q ss_pred             CCccEEEeeccc--HHHHHHHHHcCCccEEEEEecCCC
Q 018382          318 VTSMIEVIKMDY--VNKAFERLEKNDVRYRFVVDVAGS  353 (357)
Q Consensus       318 l~~~i~~~~~~~--~~~a~~~~~~~~~~Gkvvi~~~~~  353 (357)
                      +++.+++|++++  +++||+.+++++..||+|+++++.
T Consensus       319 l~~~i~~~~l~~~~~~~A~~~~~~~~~~gKvvi~~~~~  356 (360)
T 1piw_A          319 IKIWVETLPVGEAGVHEAFERMEKGDVRYRFTLVGYDK  356 (360)
T ss_dssp             CCCCEEEEESSHHHHHHHHHHHHHTCCSSEEEEECCHH
T ss_pred             CcceEEEEeccHhHHHHHHHHHHCCCCceEEEEecCcc
Confidence            998889999999  999999999998889999998654

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=5.4e-60  Score=440.29  Aligned_cols=346  Identities=40%  Similarity=0.761  Sum_probs=301.7

Q ss_pred             hhhheeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCC
Q 018382            6 TERATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNF   85 (357)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~   85 (357)
                      ..|+|++|...++.+.++++++|.|+|+++||||||+++++|++|++++.|.++...+|.++|||++|+|+++|++|++|
T Consensus        19 ~~~~~~a~~~~~~~~~l~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G~V~~vG~~V~~~   98 (369)
T 1uuf_A           19 AGLKIKAVGAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVPGHEIVGRVVAVGDQVEKY   98 (369)
T ss_dssp             ----CEEEEBSSTTSCCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHCTTSCCCSSBCCCCCEEEEEEEECTTCCSC
T ss_pred             cCceEEEEEEcCCCCCcEEEEecCCCCCCCeEEEEEEEEeecHHHHHHhcCCCCCCCCCeecccCceEEEEEECCCCCCC
Confidence            46788999987666889999999999999999999999999999999999976655679999999999999999999999


Q ss_pred             CCCCEEEEccccCCCCCCcccccCcccccccccccCcccc-CCCCCCCCccceEEEeeCcceEECCCC-CCccccccccc
Q 018382           86 KVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVY-TDGKPTQGGFAESMVVDQKFVVKIPDG-MALEQAAPLLC  163 (357)
Q Consensus        86 ~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~G~~~~~~~v~~~~~~~lP~~-l~~~~aa~~~~  163 (357)
                      ++||||++.+...+||.|..|++|.++.|++....+.+.. ..|...+|+|+||++++++.++++|++ +++++||++++
T Consensus        99 ~vGDrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~g~~~~G~~aeyv~v~~~~~~~~P~~~ls~~~aa~l~~  178 (369)
T 1uuf_A           99 APGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRHPQEQLAAVAPLLC  178 (369)
T ss_dssp             CTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCSSTTSBCCCSSBSEEEEEGGGCEECCSCGGGHHHHGGGGT
T ss_pred             CCCCEEEEccCCCCCCCCcccCCCCcccCcchhcccccccccCCCCCCCcccceEEEcchhEEECCCCCCCHHHhhhhhh
Confidence            9999999988888999999999999999997531111110 112235799999999999999999999 99999999999


Q ss_pred             hhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhC
Q 018382          164 AGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAAD  243 (357)
Q Consensus       164 ~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~  243 (357)
                      ++.|||+++..+ .+++|++|||+|+|++|++++|+|+..|++|+++++++++.+.+++ +|+++++|+++.+.++++..
T Consensus       179 ~~~tA~~al~~~-~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~-lGa~~vi~~~~~~~~~~~~~  256 (369)
T 1uuf_A          179 AGITTYSPLRHW-QAGPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKA-LGADEVVNSRNADEMAAHLK  256 (369)
T ss_dssp             HHHHHHHHHHHT-TCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-HTCSEEEETTCHHHHHTTTT
T ss_pred             hHHHHHHHHHhc-CCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCCcEEeccccHHHHHHhhc
Confidence            999999999886 5599999999999999999999999999999999999999998887 99999999988776676667


Q ss_pred             CccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCc-ccchHHHhhccceEEEEeecCHHHHHHHHHHHHhcCCCccE
Q 018382          244 SLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPM-QFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMI  322 (357)
Q Consensus       244 ~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~~i  322 (357)
                      ++|+|||++|....++.++++++++|+++.+|...... .++...++.+++++.+++.+..+++++++++++++++++.+
T Consensus       257 g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~i~~~i  336 (369)
T 1uuf_A          257 SFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPATPHKSPEVFNLIMKRRAIAGSMIGGIPETQEMLDFCAEHGIVADI  336 (369)
T ss_dssp             CEEEEEECCSSCCCHHHHHTTEEEEEEEEECCCC-------CHHHHHTTTCEEEECCSCCHHHHHHHHHHHHHHTCCCCE
T ss_pred             CCCEEEECCCCHHHHHHHHHHhccCCEEEEeccCCCCccccCHHHHHhCCcEEEEeecCCHHHHHHHHHHHHhCCCCcce
Confidence            99999999998767899999999999999998865544 56666778899999999988888999999999999999888


Q ss_pred             EEeecccHHHHHHHHHcCCccEEEEEecCCC
Q 018382          323 EVIKMDYVNKAFERLEKNDVRYRFVVDVAGS  353 (357)
Q Consensus       323 ~~~~~~~~~~a~~~~~~~~~~Gkvvi~~~~~  353 (357)
                      ++|+++++++||+.+++++..||+|+++++.
T Consensus       337 ~~~~l~~~~~A~~~~~~~~~~gKvvi~~~~~  367 (369)
T 1uuf_A          337 EMIRADQINEAYERMLRGDVKYRFVIDNRTL  367 (369)
T ss_dssp             EEECGGGHHHHHHHHHTTCSSSEEEEEGGGG
T ss_pred             EEEcHHHHHHHHHHHHcCCCceEEEEecCCC
Confidence            8899999999999999998889999998653

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=100.00  E-value=4.3e-60  Score=437.06  Aligned_cols=335  Identities=30%  Similarity=0.476  Sum_probs=303.0

Q ss_pred             heeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCC-CCCCCccCccccEEEEEeCCCCCCCCC
Q 018382            9 ATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGM-SNYPMVPGHEVVGEVKEVGSEVSNFKV   87 (357)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~-~~~p~~lG~e~~G~V~~vG~~v~~~~~   87 (357)
                      +|+++++.+.+++++++++|.|+|+++||||||+++++|++|+++++|.++. ..+|.++|||++|+|+++|+++++|++
T Consensus         2 ~MkA~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~P~v~G~E~~G~V~~vG~~v~~~~v   81 (340)
T 3s2e_A            2 MMKAAVVRAFGAPLTIDEVPVPQPGPGQVQVKIEASGVCHTDLHAADGDWPVKPTLPFIPGHEGVGYVSAVGSGVSRVKE   81 (340)
T ss_dssp             EEEEEEBCSTTSCCEEEEEECCCCCTTCEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSEEEEEEEEECSSCCSCCT
T ss_pred             ceEEEEEecCCCCCEEEEccCCCCCCCeEEEEEEEeccCHHHHHHHcCCCCCCCCCCcccCCcceEEEEEECCCCCcCCC
Confidence            3788888765667999999999999999999999999999999999998764 568999999999999999999999999


Q ss_pred             CCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhh
Q 018382           88 GDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVT  167 (357)
Q Consensus        88 Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~t  167 (357)
                      ||||++......||.|..|+.|.++.|+.....       |...+|+|+||++++++.++++|+++++++||++++++.|
T Consensus        82 GdrV~~~~~~~~cg~C~~c~~g~~~~c~~~~~~-------g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~t  154 (340)
T 3s2e_A           82 GDRVGVPWLYSACGYCEHCLQGWETLCEKQQNT-------GYSVNGGYGEYVVADPNYVGLLPDKVGFVEIAPILCAGVT  154 (340)
T ss_dssp             TCEEEEESEEECCSSSHHHHTTCGGGCTTCEEB-------TTTBCCSSBSEEEECTTTSEECCTTSCHHHHGGGGTHHHH
T ss_pred             CCEEEecCCCCCCCCChHHhCcCcccCcccccc-------CCCCCCcceeEEEechHHEEECCCCCCHHHhhcccchhHH
Confidence            999976666678999999999999999987644       3457899999999999999999999999999999999999


Q ss_pred             hhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHh---hCC
Q 018382          168 VFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEA---ADS  244 (357)
Q Consensus       168 a~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~---~~~  244 (357)
                      ||+++... .+++|++|||+|+|++|++++|+|+..|++|+++++++++.+.+++ +|+++++|+++.+..+.+   .++
T Consensus       155 a~~~l~~~-~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~-lGa~~~i~~~~~~~~~~~~~~~g~  232 (340)
T 3s2e_A          155 VYKGLKVT-DTRPGQWVVISGIGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARR-LGAEVAVNARDTDPAAWLQKEIGG  232 (340)
T ss_dssp             HHHHHHTT-TCCTTSEEEEECCSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-TTCSEEEETTTSCHHHHHHHHHSS
T ss_pred             HHHHHHHc-CCCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH-cCCCEEEeCCCcCHHHHHHHhCCC
Confidence            99999665 5599999999999999999999999999999999999999998887 999999998875544433   358


Q ss_pred             ccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCcccchHHHhhccceEEEEeecCHHHHHHHHHHHHhcCCCccEEE
Q 018382          245 LDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEV  324 (357)
Q Consensus       245 ~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~~i~~  324 (357)
                      +|+|||+++....++.++++++++|+++.+|.......++...++.+++++.+++..+.++++++++++++|++++.+++
T Consensus       233 ~d~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~~~~~~  312 (340)
T 3s2e_A          233 AHGVLVTAVSPKAFSQAIGMVRRGGTIALNGLPPGDFGTPIFDVVLKGITIRGSIVGTRSDLQESLDFAAHGDVKATVST  312 (340)
T ss_dssp             EEEEEESSCCHHHHHHHHHHEEEEEEEEECSCCSSEEEEEHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTSCCCCEEE
T ss_pred             CCEEEEeCCCHHHHHHHHHHhccCCEEEEeCCCCCCCCCCHHHHHhCCeEEEEEecCCHHHHHHHHHHHHhCCCCceEEE
Confidence            99999999987688999999999999999998776666777788889999999999999999999999999999998888


Q ss_pred             eecccHHHHHHHHHcCCccEEEEEecCC
Q 018382          325 IKMDYVNKAFERLEKNDVRYRFVVDVAG  352 (357)
Q Consensus       325 ~~~~~~~~a~~~~~~~~~~Gkvvi~~~~  352 (357)
                      |+++++++||+.+++++..||+|+++++
T Consensus       313 ~~l~~~~~A~~~~~~~~~~Gkvvv~~~~  340 (340)
T 3s2e_A          313 AKLDDVNDVFGRLREGKVEGRVVLDFSR  340 (340)
T ss_dssp             ECGGGHHHHHHHHHTTCCCSEEEEECCC
T ss_pred             EeHHHHHHHHHHHHcCCCceEEEEecCC
Confidence            9999999999999999999999999864

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=100.00  E-value=2.9e-58  Score=424.50  Aligned_cols=334  Identities=31%  Similarity=0.520  Sum_probs=296.1

Q ss_pred             eeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCC-CCCCCCccCccccEEEEEeCCCCCCCCCC
Q 018382           10 TIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLG-MSNYPMVPGHEVVGEVKEVGSEVSNFKVG   88 (357)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~-~~~~p~~lG~e~~G~V~~vG~~v~~~~~G   88 (357)
                      |+++++.+.+++++++++|.|+|+++||||||.++++|++|++++.|.++ ...+|.++|||++|+|+++|+++++|++|
T Consensus         1 Mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~GhE~~G~V~~vG~~v~~~~vG   80 (339)
T 1rjw_A            1 MKAAVVEQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGIVEEVGPGVTHLKVG   80 (339)
T ss_dssp             CEEEEBSSTTSCCEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSCEEEEEEEECTTCCSCCTT
T ss_pred             CeEEEEcCCCCCcEEEEeeCCCCCCCEEEEEEEEEeEchhhHHHhcCCCCcCCCCCeeccccceEEEEEECCCCCcCCCC
Confidence            46777654444789999999999999999999999999999999998765 34679999999999999999999999999


Q ss_pred             CEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhhh
Q 018382           89 DKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTV  168 (357)
Q Consensus        89 d~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta  168 (357)
                      |||++.+....||.|..|+.|.++.|++....       |...+|+|+||++++++.++++|+++++++||++++++.||
T Consensus        81 drV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~-------g~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta  153 (339)
T 1rjw_A           81 DRVGIPWLYSACGHCDYCLSGQETLCEHQKNA-------GYSVDGGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTT  153 (339)
T ss_dssp             CEEEECSEEECCSCSHHHHTTCGGGCTTCEEB-------TTTBCCSSBSEEEEEGGGCEECCTTSCHHHHGGGGTHHHHH
T ss_pred             CEEEEecCCCCCCCCchhhCcCcccCCCccee-------ecCCCCcceeeEEechHHEEECCCCCCHHHhhhhhhhHHHH
Confidence            99987766667999999999999999876543       33468999999999999999999999999999999999999


Q ss_pred             hhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHH---HHhhCCc
Q 018382          169 FSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRM---QEAADSL  245 (357)
Q Consensus       169 ~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~---~~~~~~~  245 (357)
                      |+++... .+++|++|||+|+|++|++++|+|+..|++|+++++++++.+.+++ +|+++++|+++.+..   .+..+++
T Consensus       154 ~~~l~~~-~~~~g~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-lGa~~~~d~~~~~~~~~~~~~~~~~  231 (339)
T 1rjw_A          154 YKALKVT-GAKPGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKE-LGADLVVNPLKEDAAKFMKEKVGGV  231 (339)
T ss_dssp             HHHHHHH-TCCTTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-TTCSEEECTTTSCHHHHHHHHHSSE
T ss_pred             HHHHHhc-CCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-CCCCEEecCCCccHHHHHHHHhCCC
Confidence            9999887 4599999999999889999999999999999999999999988877 999999988764433   3333689


Q ss_pred             cEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCcccchHHHhhccceEEEEeecCHHHHHHHHHHHHhcCCCccEEEe
Q 018382          246 DYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEVI  325 (357)
Q Consensus       246 d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~~i~~~  325 (357)
                      |+|||++|....+..++++++++|+++.+|.......++...++.+++++.++.....++++++++++.++.+++.+++|
T Consensus       232 d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~~~~~~~  311 (339)
T 1rjw_A          232 HAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPEEMPIPIFDTVLNGIKIIGSIVGTRKDLQEALQFAAEGKVKTIIEVQ  311 (339)
T ss_dssp             EEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSSEEEEEHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTSCCCCEEEE
T ss_pred             CEEEECCCCHHHHHHHHHHhhcCCEEEEecccCCCCccCHHHHHhCCcEEEEeccCCHHHHHHHHHHHHcCCCCccEEEE
Confidence            99999999854788999999999999999887655556667778899999999888888999999999999999878999


Q ss_pred             ecccHHHHHHHHHcCCccEEEEEecCC
Q 018382          326 KMDYVNKAFERLEKNDVRYRFVVDVAG  352 (357)
Q Consensus       326 ~~~~~~~a~~~~~~~~~~Gkvvi~~~~  352 (357)
                      +++++++||+.+++++..||+++++++
T Consensus       312 ~l~~~~~A~~~~~~~~~~gKvvi~~~~  338 (339)
T 1rjw_A          312 PLEKINEVFDRMLKGQINGRVVLTLED  338 (339)
T ss_dssp             EGGGHHHHHHHHHTTCCSSEEEEECCC
T ss_pred             cHHHHHHHHHHHHcCCCceEEEEecCC
Confidence            999999999999999888999999864

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=100.00  E-value=1.4e-58  Score=428.48  Aligned_cols=333  Identities=29%  Similarity=0.522  Sum_probs=300.3

Q ss_pred             eeeehcc-CCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCCC
Q 018382           10 TIGWAAK-DPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVG   88 (357)
Q Consensus        10 ~~~~~~~-~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~G   88 (357)
                      |+|+++. .+++.++++|+|+|+|++|||||||.++++|++|+++++|.++. ++|.++|||++|+|+++|++|++|++|
T Consensus         1 MKA~v~~~~~~~~~~l~e~~~P~~~p~eVLVkv~a~gic~~D~~~~~G~~~~-~~p~i~GhE~aG~V~~vG~~V~~~~~G   79 (348)
T 4eez_A            1 MKAAVVRHNPDGYADLVEKELRAIKPNEALLDMEYCGVCHTDLHVAAGDFGN-KAGTVLGHEGIGIVKEIGADVSSLQVG   79 (348)
T ss_dssp             CEEEEECSSCCSSEEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHTTTTCC-CTTCBCCSEEEEEEEEECTTCCSCCTT
T ss_pred             CeEEEEEcCCCCcEEEEEeECCCCCCCEEEEEEEEEEECHHHHHHhcCCCCC-CCCcccceeEEEEEEEECceeeecccC
Confidence            4555543 34577999999999999999999999999999999999998764 679999999999999999999999999


Q ss_pred             CEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhhh
Q 018382           89 DKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTV  168 (357)
Q Consensus        89 d~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta  168 (357)
                      |||++.+...+|+.|.+|..+.++.|......       +...+|+|+||+.++++.++++|+++++++||++++++.||
T Consensus        80 drV~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-------~~~~~G~~ae~~~~~~~~~~~iP~~~~~~~aa~l~~~~~ta  152 (348)
T 4eez_A           80 DRVSVAWFFEGCGHCEYCVSGNETFCREVKNA-------GYSVDGGMAEEAIVVADYAVKVPDGLDPIEASSITCAGVTT  152 (348)
T ss_dssp             CEEEEESEEECCSSSHHHHTTCGGGCTTCEEB-------TTTBCCSSBSEEEEEGGGSCBCCTTSCHHHHHHHHHHHHHH
T ss_pred             CeEeecccccccCccccccCCccccccccccc-------ccccCCcceeeccccccceeecCCCCCHHHHhhcccceeeE
Confidence            99999999999999999999999999877654       34578999999999999999999999999999999999999


Q ss_pred             hhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHc-CCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHH---hhC-
Q 018382          169 FSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAM-GHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQE---AAD-  243 (357)
Q Consensus       169 ~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~-g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~---~~~-  243 (357)
                      |++++.... ++|++|||+|+|++|.+++|+++.. |++|++++++++|.+.+++ +|+++++|+++.+..++   +++ 
T Consensus       153 ~~~l~~~~~-~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~-~Ga~~~i~~~~~~~~~~v~~~t~g  230 (348)
T 4eez_A          153 YKAIKVSGV-KPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKK-IGADVTINSGDVNPVDEIKKITGG  230 (348)
T ss_dssp             HHHHHHHTC-CTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHH-TTCSEEEEC-CCCHHHHHHHHTTS
T ss_pred             EeeecccCC-CCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhh-cCCeEEEeCCCCCHHHHhhhhcCC
Confidence            999987766 9999999999999999999999876 5699999999999888887 99999999988655444   333 


Q ss_pred             -CccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCcccchHHHhhccceEEEEeecCHHHHHHHHHHHHhcCCCccE
Q 018382          244 -SLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMI  322 (357)
Q Consensus       244 -~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~~i  322 (357)
                       ++|++++++++...+..++++++++|+++.+|.......++...++.+++++.|++.+++++++++++++++|++++.+
T Consensus       231 ~g~d~~~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~gs~~~~~~~~~~~~~l~~~g~i~p~~  310 (348)
T 4eez_A          231 LGVQSAIVCAVARIAFEQAVASLKPMGKMVAVAVPNTEMTLSVPTVVFDGVEVAGSLVGTRLDLAEAFQFGAEGKVKPIV  310 (348)
T ss_dssp             SCEEEEEECCSCHHHHHHHHHTEEEEEEEEECCCCSCEEEECHHHHHHSCCEEEECCSCCHHHHHHHHHHHHTTSCCCCE
T ss_pred             CCceEEEEeccCcchhheeheeecCCceEEEEeccCCCCccCHHHHHhCCeEEEEEecCCHHHHHHHHHHHHcCCCEEEE
Confidence             7999999999886789999999999999999987777778888889999999999999999999999999999999878


Q ss_pred             EEeecccHHHHHHHHHcCCccEEEEEecCC
Q 018382          323 EVIKMDYVNKAFERLEKNDVRYRFVVDVAG  352 (357)
Q Consensus       323 ~~~~~~~~~~a~~~~~~~~~~Gkvvi~~~~  352 (357)
                      ++|+|+++++||+.+++++..||+||+++.
T Consensus       311 ~~~~l~~~~~A~~~l~~g~~~GKvVl~~sk  340 (348)
T 4eez_A          311 ATRKLEEINDIIDEMKAGKIEGRMVIDFTK  340 (348)
T ss_dssp             EEECGGGHHHHHHHHHTTCCSSEEEEECC-
T ss_pred             EEEeHHHHHHHHHHHHCCCCccEEEEEccc
Confidence            999999999999999999999999999965

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=3.5e-58  Score=427.04  Aligned_cols=332  Identities=27%  Similarity=0.402  Sum_probs=289.9

Q ss_pred             hhheeeehccCCCCCcceeeeecCC-CCCCcEEEEEeeeccccchHHHHhcCCC---CCCCCCccCccccEEEEEeCCCC
Q 018382            7 ERATIGWAAKDPSGILSPYTYTLRN-TGAEDVYIKVLYCGICHTDIHQIKNDLG---MSNYPMVPGHEVVGEVKEVGSEV   82 (357)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~evlV~v~~~~~~~~D~~~~~g~~~---~~~~p~~lG~e~~G~V~~vG~~v   82 (357)
                      |++|+++++.+.+++++++++|.|+ |+++||||||.++++|++|++++.|.++   ...+|.++|||++|+|+++|+++
T Consensus        13 ~~~mka~~~~~~g~~l~~~~~p~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~v   92 (359)
T 1h2b_A           13 VERLKAARLHEYNKPLRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEEVAEGV   92 (359)
T ss_dssp             ----CEEEESSTTSCCEEECCCCCCCBTTBCEEEEEEEEECCHHHHHHHHTTTHHHHCCCSSEECCCCEEEEEEEECTTC
T ss_pred             hhhceEEEEecCCCCcEEEEccCCCCCCCCEEEEEEEEEEecccchHHHhCCCccccCCCCCeecCcCceEEEEEECCCC
Confidence            6678888887554578999999999 9999999999999999999999998765   34679999999999999999999


Q ss_pred             CCCCCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccc---
Q 018382           83 SNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAA---  159 (357)
Q Consensus        83 ~~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa---  159 (357)
                      ++|++||||+.. ....||.|..|+.|.++.|++....       |...+|+|+||++++++.++++|+++++++||   
T Consensus        93 ~~~~vGdrV~~~-~~~~Cg~C~~C~~g~~~~C~~~~~~-------G~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~  164 (359)
T 1h2b_A           93 EGLEKGDPVILH-PAVTDGTCLACRAGEDMHCENLEFP-------GLNIDGGFAEFMRTSHRSVIKLPKDISREKLVEMA  164 (359)
T ss_dssp             CSCCTTCEEEEC-SCBCCSCSHHHHTTCGGGCTTCBCB-------TTTBCCSSBSEEEECGGGEEECCTTCCHHHHHHTG
T ss_pred             CCCCCCCEEEeC-CCCCCCCChhhhCcCcccCCCcccc-------ccCCCCcccceEEechHhEEECCCCCCHHHHhhcc
Confidence            999999999554 4557999999999999999876433       33468999999999999999999999999999   


Q ss_pred             cccchhhhhhhhhhcc-CCCCCCCeEEEEecChHHHHHHHHHHHc-CCeEEEEeCCcHHHHHHHHhcCCcEEEcCCCh--
Q 018382          160 PLLCAGVTVFSPLSHF-GLKQSGLRGGILGLGGVGHMGVLIAKAM-GHHVTVISSSDKKRVEAMEHLGADQYLVSSDA--  235 (357)
Q Consensus       160 ~~~~~~~ta~~~l~~~-~~~~~~~~VlI~G~g~~G~~ai~la~~~-g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~--  235 (357)
                      ++++++.|||+++... ..+++|++|||+|+|++|++++|+|+.. |++|+++++++++.+.+++ +|+++++|+++.  
T Consensus       165 ~l~~~~~ta~~al~~~~~~~~~g~~VlV~GaG~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~~-lGa~~vi~~~~~~~  243 (359)
T 1h2b_A          165 PLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAER-LGADHVVDARRDPV  243 (359)
T ss_dssp             GGGTHHHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHH-TTCSEEEETTSCHH
T ss_pred             chhhhHHHHHHHHHhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH-hCCCEEEeccchHH
Confidence            8899999999999884 5569999999999999999999999999 9999999999999998887 999999998875  


Q ss_pred             hHHHHhhC--CccEEEEcCCCCC--ChHHHHhccccCCeEEEEccCCCCcccchHHHhhccceEEEEeecCHHHHHHHHH
Q 018382          236 TRMQEAAD--SLDYIIDTVPANH--PLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLE  311 (357)
Q Consensus       236 ~~~~~~~~--~~d~v~d~~g~~~--~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~  311 (357)
                      +.+++++.  ++|+|||++|...  .+..++++  ++|+++.+|..... .++...++.+++++.++.....++++++++
T Consensus       244 ~~v~~~~~g~g~Dvvid~~G~~~~~~~~~~~~~--~~G~~v~~g~~~~~-~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~  320 (359)
T 1h2b_A          244 KQVMELTRGRGVNVAMDFVGSQATVDYTPYLLG--RMGRLIIVGYGGEL-RFPTIRVISSEVSFEGSLVGNYVELHELVT  320 (359)
T ss_dssp             HHHHHHTTTCCEEEEEESSCCHHHHHHGGGGEE--EEEEEEECCCSSCC-CCCHHHHHHTTCEEEECCSCCHHHHHHHHH
T ss_pred             HHHHHHhCCCCCcEEEECCCCchHHHHHHHhhc--CCCEEEEEeCCCCC-CCCHHHHHhCCcEEEEecCCCHHHHHHHHH
Confidence            33444543  7999999999875  57777777  99999999876654 666667788999999999888889999999


Q ss_pred             HHHhcCCCccEEEeecccHHHHHHHHHcCCccEEEEEec
Q 018382          312 FCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDV  350 (357)
Q Consensus       312 ~~~~~~l~~~i~~~~~~~~~~a~~~~~~~~~~Gkvvi~~  350 (357)
                      ++.++++++.+++|+++++++||+.+++++..||+|+++
T Consensus       321 l~~~g~l~~~i~~~~l~~~~~A~~~~~~~~~~gKvvv~~  359 (359)
T 1h2b_A          321 LALQGKVRVEVDIHKLDEINDVLERLEKGEVLGRAVLIP  359 (359)
T ss_dssp             HHHTTSCCCCEEEEEGGGHHHHHHHHHTTCCSSEEEEEC
T ss_pred             HHHcCCCcceEEEEeHHHHHHHHHHHHcCCCceEEEeeC
Confidence            999999998779999999999999999998889999874

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=100.00  E-value=5.6e-58  Score=428.70  Aligned_cols=345  Identities=23%  Similarity=0.308  Sum_probs=294.5

Q ss_pred             chhhhheeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCC
Q 018382            4 LDTERATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVS   83 (357)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~   83 (357)
                      ..+|++|+++++.+.+++++++++|.|+|+++||||||+++++|++|++++.|..+...+|.++|||++|+|+++|++++
T Consensus         3 ~~~~~tmkA~v~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G~V~~vG~~v~   82 (378)
T 3uko_A            3 QGQVITCKAAVAYEPNKPLVIEDVQVAPPQAGEVRIKILYTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVT   82 (378)
T ss_dssp             TTSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHTTCCTTCCSSBCCCCEEEEEEEEECTTCC
T ss_pred             cccceeeEEEEEecCCCccEEEEecCCCCCCCeEEEEEEEeecCHHHHHHhcCCCCCCCCCccCCccceEEEEEeCCCCC
Confidence            46788999999886666799999999999999999999999999999999999877778899999999999999999999


Q ss_pred             CCCCCCEEEEccccCCCCCCcccccCccccccccccc-Ccccc-CC-------------CCCCCCccceEEEeeCcceEE
Q 018382           84 NFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWS-YNDVY-TD-------------GKPTQGGFAESMVVDQKFVVK  148 (357)
Q Consensus        84 ~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~-~~-------------~~~~~G~~~~~~~v~~~~~~~  148 (357)
                      +|++||||++.+ ...||.|.+|+.|.++.|+..... ..+.. .+             .....|+|+||++++++.+++
T Consensus        83 ~~~vGdrV~~~~-~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~  161 (378)
T 3uko_A           83 EVQAGDHVIPCY-QAECRECKFCKSGKTNLCGKVRSATGVGIMMNDRKSRFSVNGKPIYHFMGTSTFSQYTVVHDVSVAK  161 (378)
T ss_dssp             SCCTTCEEEECS-SCCCSSSHHHHHTSCSCCCSSHHHHTTTCCTTTSSCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEE
T ss_pred             cCCCCCEEEEec-CCCCCCChhhhCcCcCcCcCcccccccccccccCccccccCCcccccccCCcceEeEEEechhheEE
Confidence            999999997655 456999999999999999976431 01100 11             122347999999999999999


Q ss_pred             CCCCCCccccccccchhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCc
Q 018382          149 IPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGAD  227 (357)
Q Consensus       149 lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~  227 (357)
                      +|+++++++||++++++.|||+++.+...+++|++|||+|+|++|++++|+|+..|+ +|+++++++++.+.+++ +|++
T Consensus       162 iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~-lGa~  240 (378)
T 3uko_A          162 IDPTAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKK-FGVN  240 (378)
T ss_dssp             CCTTSCHHHHGGGGTHHHHHHHHHHTTTCCCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHT-TTCC
T ss_pred             CCCCCCHHHhhhhhhhHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH-cCCc
Confidence            999999999999999999999999777777999999999999999999999999999 89999999999988877 9999


Q ss_pred             EEEcCC--ChhH---HHHhh-CCccEEEEcCCCCCChHHHHhccccC-CeEEEEccCCCC--cccchHHHhhccceEEEE
Q 018382          228 QYLVSS--DATR---MQEAA-DSLDYIIDTVPANHPLEPYLSLLKLD-GKLILTGVINTP--MQFLTPMVMLGRKAITGS  298 (357)
Q Consensus       228 ~vv~~~--~~~~---~~~~~-~~~d~v~d~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~~~~~~~~~~~~~~i~g~  298 (357)
                      +++|++  +.+.   +++++ +++|+|||++|....+..++++++++ |+++.+|.....  ..++...++. +.++.|+
T Consensus       241 ~vi~~~~~~~~~~~~i~~~~~gg~D~vid~~g~~~~~~~~~~~l~~g~G~iv~~G~~~~~~~~~~~~~~~~~-~~~i~g~  319 (378)
T 3uko_A          241 EFVNPKDHDKPIQEVIVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGT  319 (378)
T ss_dssp             EEECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTTCCEEECTHHHHT-TCEEEEC
T ss_pred             EEEccccCchhHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHHhhccCCEEEEEcccCCCCccccCHHHHhc-CcEEEEE
Confidence            999987  3333   33443 38999999999965789999999996 999999976533  3344445544 8899998


Q ss_pred             eec---CHHHHHHHHHHHHhcCCCc--cE-EEeecccHHHHHHHHHcCCccEEEEEecCC
Q 018382          299 FIG---SMKETKEMLEFCREKGVTS--MI-EVIKMDYVNKAFERLEKNDVRYRFVVDVAG  352 (357)
Q Consensus       299 ~~~---~~~~~~~~~~~~~~~~l~~--~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~~~  352 (357)
                      ..+   ..++++++++++.+++++.  .+ ++|+|+++++||+.+++++.. |+||++++
T Consensus       320 ~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~g~~~-Kvvi~~~~  378 (378)
T 3uko_A          320 AFGGFKSRTQVPWLVEKYMNKEIKVDEYITHNLTLGEINKAFDLLHEGTCL-RCVLDTSK  378 (378)
T ss_dssp             SGGGCCHHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHTTCTTCS-EEEEETTC
T ss_pred             EecCCCchHHHHHHHHHHHcCCCChhHheeeEeeHHHHHHHHHHHHCCCce-EEEEecCC
Confidence            765   4578999999999998874  57 899999999999999998876 99999863

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=100.00  E-value=1.8e-57  Score=424.63  Aligned_cols=344  Identities=26%  Similarity=0.388  Sum_probs=292.0

Q ss_pred             CCCchhhhheeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCC
Q 018382            1 MGSLDTERATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGS   80 (357)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~   80 (357)
                      |+..+.|++|+++++.+.+++++++++|.|+|+++||||||+++++|++|++++.|..+ ..+|.++|||++|+|+++|+
T Consensus         1 ~~~~~~p~~mka~~~~~~g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-~~~P~v~GhE~~G~V~~vG~   79 (373)
T 1p0f_A            1 MCTAGKDITCKAAVAWEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIP-SKFPVILGHEAVGVVESIGA   79 (373)
T ss_dssp             -CCTTSCEEEEEEEBSSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSC-CCSSBCCCCCEEEEEEEECT
T ss_pred             CcccCCcceeEEEEEEcCCCCeeEEEeeCCCCCCCeEEEEEeEEeecchhHHHhcCCCC-CCCCcccCcCceEEEEEECC
Confidence            77778999999999986555799999999999999999999999999999999998766 56799999999999999999


Q ss_pred             CCCCCCCCCEEEEccccCCCCCCcccccCcccccccccccCc-cccCCC-------------CCCCCccceEEEeeCcce
Q 018382           81 EVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYN-DVYTDG-------------KPTQGGFAESMVVDQKFV  146 (357)
Q Consensus        81 ~v~~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~-------------~~~~G~~~~~~~v~~~~~  146 (357)
                      +|++|++||||++.+. ..||.|.+|++|.++.|++...... +...++             ....|+|+||++++++.+
T Consensus        80 ~v~~~~vGdrV~~~~~-~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~  158 (373)
T 1p0f_A           80 GVTCVKPGDKVIPLFV-PQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAV  158 (373)
T ss_dssp             TCCSCCTTCEEEECSS-CCCSSSHHHHCTTCCCCTTCSTTTCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEETTSE
T ss_pred             CCCccCCCCEEEECCC-CCCCCChhhcCCCcCcCcCCCcccccccccCCccccccCCcccccccCCccceeEEEEchhhE
Confidence            9999999999977654 5699999999999999997643210 111111             123699999999999999


Q ss_pred             EECCCCCCccccccccchhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcC
Q 018382          147 VKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLG  225 (357)
Q Consensus       147 ~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g  225 (357)
                      +++|++++++ ||++++++.|||+++.+...+++|++|||+|+|++|++++|+|+..|+ +|+++++++++.+.+++ +|
T Consensus       159 ~~iP~~l~~~-aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~-lG  236 (373)
T 1p0f_A          159 AKIDPKAPLE-SCLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIE-LG  236 (373)
T ss_dssp             EEECTTCCGG-GGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH-TT
T ss_pred             EECCCCCChh-hhhhhhHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHH-cC
Confidence            9999999999 999999999999998777777999999999999999999999999999 89999999999988887 99


Q ss_pred             CcEEEcCCC--hhH---HHHhh-CCccEEEEcCCCCCChHHHHhccccC-CeEEEEccCCC--CcccchHHHhhccceEE
Q 018382          226 ADQYLVSSD--ATR---MQEAA-DSLDYIIDTVPANHPLEPYLSLLKLD-GKLILTGVINT--PMQFLTPMVMLGRKAIT  296 (357)
Q Consensus       226 ~~~vv~~~~--~~~---~~~~~-~~~d~v~d~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~i~  296 (357)
                      +++++|+++  .+.   +.+++ +++|+|||++|....+..++++++++ |+++.+|....  ...++...++.++ ++.
T Consensus       237 a~~vi~~~~~~~~~~~~i~~~t~gg~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~-~i~  315 (373)
T 1p0f_A          237 ATECLNPKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNERLPLDPLLLLTGR-SLK  315 (373)
T ss_dssp             CSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECCCCCTTCCEEECTHHHHTTC-EEE
T ss_pred             CcEEEecccccchHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHHhcCCCEEEEEccCCCCCccccCHHHhccCc-eEE
Confidence            999998864  223   33343 38999999999854789999999999 99999987653  2445566666777 999


Q ss_pred             EEeec--CHHHHHHHHHHHHhcCCC--ccE-EEeecccHHHHHHHHHcCCccEEEEEec
Q 018382          297 GSFIG--SMKETKEMLEFCREKGVT--SMI-EVIKMDYVNKAFERLEKNDVRYRFVVDV  350 (357)
Q Consensus       297 g~~~~--~~~~~~~~~~~~~~~~l~--~~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~  350 (357)
                      |+..+  ..++++++++++.+++++  +.+ ++|+++++++||+.+++++. +|+++++
T Consensus       316 g~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvi~~  373 (373)
T 1p0f_A          316 GSVFGGFKGEEVSRLVDDYMKKKINVNFLVSTKLTLDQINKAFELLSSGQG-VRSIMIY  373 (373)
T ss_dssp             ECSGGGCCGGGHHHHHHHHHTTSSCGGGGEEEEECGGGHHHHHHHTTTSSC-SEEEEEC
T ss_pred             eeccCCcCHHHHHHHHHHHHcCCCCchheEEEEeeHHHHHHHHHHHHCCCc-ceEEEeC
Confidence            98753  346899999999999987  457 89999999999999988775 7999874

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=100.00  E-value=5.3e-58  Score=423.68  Aligned_cols=330  Identities=27%  Similarity=0.364  Sum_probs=273.9

Q ss_pred             heeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCC--CCCCCCccCccccEEEEEeCCCCCCCC
Q 018382            9 ATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLG--MSNYPMVPGHEVVGEVKEVGSEVSNFK   86 (357)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~--~~~~p~~lG~e~~G~V~~vG~~v~~~~   86 (357)
                      +|+++++.+.+++++++++|.|+|+++||||||+++++|++|++++.|.++  ...+|.++|||++|+|+++|++ ++|+
T Consensus         3 ~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~p~i~G~E~~G~V~~vG~~-~~~~   81 (344)
T 2h6e_A            3 KSKAALLKKFSEPLSIEDVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVEAKQGFRLPIILGHENAGTIVEVGEL-AKVK   81 (344)
T ss_dssp             EEEBCEECSCCC-----EEEECCCCTTCEEEEEEEEECCHHHHHHHTTSCCCTTCCSSEECCCCEEEEEEEECTT-CCCC
T ss_pred             eeEEEEEecCCCCCeEEEeeCCCCCCCEEEEEEEEEEechhhHHHHcCCCcccCCCCCccccccceEEEEEECCC-CCCC
Confidence            578888765545789999999999999999999999999999999999766  3467899999999999999999 9999


Q ss_pred             CCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEee-CcceEECCCCCCccccccccchh
Q 018382           87 VGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVD-QKFVVKIPDGMALEQAAPLLCAG  165 (357)
Q Consensus        87 ~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~-~~~~~~lP~~l~~~~aa~~~~~~  165 (357)
                      +||||+.. ....||.|..|+.|.++.|++....       |...+|+|+||++++ ++.++++ +++++++||++++++
T Consensus        82 ~GdrV~~~-~~~~Cg~C~~C~~g~~~~C~~~~~~-------G~~~~G~~aey~~v~~~~~~~~i-~~l~~~~aa~l~~~~  152 (344)
T 2h6e_A           82 KGDNVVVY-ATWGDLTCRYCREGKFNICKNQIIP-------GQTTNGGFSEYMLVKSSRWLVKL-NSLSPVEAAPLADAG  152 (344)
T ss_dssp             TTCEEEEC-SCBCCSCSTTGGGTCGGGCTTCBCB-------TTTBCCSSBSEEEESCGGGEEEE-SSSCHHHHGGGGTHH
T ss_pred             CCCEEEEC-CCCCCCCChhhhCCCcccCCCcccc-------ccccCCcceeeEEecCcccEEEe-CCCCHHHhhhhhhhh
Confidence            99999544 4557999999999999999876422       334689999999999 9999999 999999999999999


Q ss_pred             hhhhhhhhcc----CCCCCCCeEEEEecChHHHHHHHHHHHc--CCeEEEEeCCcHHHHHHHHhcCCcEEEcCCC-hhHH
Q 018382          166 VTVFSPLSHF----GLKQSGLRGGILGLGGVGHMGVLIAKAM--GHHVTVISSSDKKRVEAMEHLGADQYLVSSD-ATRM  238 (357)
Q Consensus       166 ~ta~~~l~~~----~~~~~~~~VlI~G~g~~G~~ai~la~~~--g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~-~~~~  238 (357)
                      .|||+++...    +.+ +|++|||+|+|++|++++|+|+..  |++|+++++++++.+.+++ +|+++++|+++ .+.+
T Consensus       153 ~ta~~al~~~~~~~~~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~-lGa~~vi~~~~~~~~~  230 (344)
T 2h6e_A          153 TTSMGAIRQALPFISKF-AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALE-LGADYVSEMKDAESLI  230 (344)
T ss_dssp             HHHHHHHHHHHHHHTTC-SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHH-HTCSEEECHHHHHHHH
T ss_pred             HHHHHHHHhhhhcccCC-CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHH-hCCCEEeccccchHHH
Confidence            9999999887    366 999999999999999999999999  9999999999999988887 99999998876 6666


Q ss_pred             HHhhC--CccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCcccchHHHhhccceEEEEeecCHHHHHHHHHHHHhc
Q 018382          239 QEAAD--SLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREK  316 (357)
Q Consensus       239 ~~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~  316 (357)
                      +++++  ++|+|||++|....++.++++++++|+++.+|.......++...++.+++++.+++....++++++++++.++
T Consensus       231 ~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g  310 (344)
T 2h6e_A          231 NKLTDGLGASIAIDLVGTEETTYNLGKLLAQEGAIILVGMEGKRVSLEAFDTAVWNKKLLGSNYGSLNDLEDVVRLSESG  310 (344)
T ss_dssp             HHHHTTCCEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSSCCCCCHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTT
T ss_pred             HHhhcCCCccEEEECCCChHHHHHHHHHhhcCCEEEEeCCCCCCcccCHHHHhhCCcEEEEEecCCHHHHHHHHHHHHcC
Confidence            66653  7999999999875788999999999999999886655566777778899999999888888999999999999


Q ss_pred             CCCccEEEeecccHHHHHHHHHcCCccEEEEEec
Q 018382          317 GVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDV  350 (357)
Q Consensus       317 ~l~~~i~~~~~~~~~~a~~~~~~~~~~Gkvvi~~  350 (357)
                      ++++.+++|+++++++||+.+++++..||+|+++
T Consensus       311 ~i~~~i~~~~l~~~~~A~~~~~~~~~~gKvvl~~  344 (344)
T 2h6e_A          311 KIKPYIIKVPLDDINKAFTNLDEGRVDGRQVITP  344 (344)
T ss_dssp             SSCCCEEEECC----------------CEEEECC
T ss_pred             CCCcceEEEeHHHHHHHHHHHHcCCCceEEEEeC
Confidence            9998779999999999999999988889999864

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=100.00  E-value=3e-57  Score=423.56  Aligned_cols=343  Identities=23%  Similarity=0.348  Sum_probs=290.7

Q ss_pred             CchhhhheeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCC
Q 018382            3 SLDTERATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEV   82 (357)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v   82 (357)
                      +.+.|++|+++++.+.+++++++++|.|+|+++||||||+++++|++|++++.|. +...+|.++|||++|+|+++|++|
T Consensus         2 ~~~~p~~mka~~~~~~g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~-~~~~~P~v~GhE~~G~V~~vG~~v   80 (376)
T 1e3i_A            2 TQGKVIKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPK-KKALFPVVLGHECAGIVESVGPGV   80 (376)
T ss_dssp             CTTSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHTTCTT-SCCCSSBCCCCEEEEEEEEECTTC
T ss_pred             CCCCChheeEEEEecCCCCeEEEEeeCCCCCCCeEEEEEeEEeEchhhHHHhcCC-CCCCCCcccCccccEEEEEECCCC
Confidence            3577899999998765557999999999999999999999999999999999886 545689999999999999999999


Q ss_pred             CCCCCCCEEEEccccCCCCCCcccccCccccccccc----ccC-ccccCCC-------------CCCCCccceEEEeeCc
Q 018382           83 SNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKI----WSY-NDVYTDG-------------KPTQGGFAESMVVDQK  144 (357)
Q Consensus        83 ~~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~----~~~-~~~~~~~-------------~~~~G~~~~~~~v~~~  144 (357)
                      ++|++||||++.+. ..||.|..|+.|+++.|+...    +.. .+...+|             ....|+|+||++++++
T Consensus        81 ~~~~vGdrV~~~~~-~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~  159 (376)
T 1e3i_A           81 TNFKPGDKVIPFFA-PQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEA  159 (376)
T ss_dssp             CSCCTTCEEEECSS-CCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGG
T ss_pred             ccCCCCCEEEECCc-CCCCCCccccCCCcccCcCcCccccccccccccccCccccccCCcccccccCCccceeEEEeccc
Confidence            99999999977654 469999999999999998753    100 1111111             1135999999999999


Q ss_pred             ceEECCCCCCccccccccchhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHh
Q 018382          145 FVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEH  223 (357)
Q Consensus       145 ~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~  223 (357)
                      .++++|+++++++||++++++.|||+++.+...+++|++|||+|+|++|++++|+|+..|+ +|+++++++++.+.+++ 
T Consensus       160 ~~~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~-  238 (376)
T 1e3i_A          160 NLARVDDEANLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKA-  238 (376)
T ss_dssp             GEEECCTTCCHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-
T ss_pred             cEEECCCCCCHHHhhhhccHHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH-
Confidence            9999999999999999999999999998777777999999999999999999999999999 89999999999988877 


Q ss_pred             cCCcEEEcCCC--hhH---HHHhh-CCccEEEEcCCCCCChHHHHhccccC-CeEEEEccCCCCcccchHHHhhccceEE
Q 018382          224 LGADQYLVSSD--ATR---MQEAA-DSLDYIIDTVPANHPLEPYLSLLKLD-GKLILTGVINTPMQFLTPMVMLGRKAIT  296 (357)
Q Consensus       224 ~g~~~vv~~~~--~~~---~~~~~-~~~d~v~d~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~i~  296 (357)
                      +|+++++|+++  .+.   +.+++ +++|+|||++|....+..++++++++ |+++.+|.......++...++.++ ++.
T Consensus       239 lGa~~vi~~~~~~~~~~~~v~~~~~~g~Dvvid~~G~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~-~i~  317 (376)
T 1e3i_A          239 LGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVDEMTIPTVDVILGR-SIN  317 (376)
T ss_dssp             TTCSEEECGGGCSSCHHHHHHHHHTSCBSEEEESSCCHHHHHHHHHTBCTTTCEEEECCCSSSEEEEEHHHHHTTC-EEE
T ss_pred             hCCcEEEccccccchHHHHHHHHhCCCccEEEECCCCHHHHHHHHHHhhcCCCEEEEECCCCCccccCHHHhhccC-eEE
Confidence            99999998874  223   33333 38999999999854789999999999 999999885444556666677787 999


Q ss_pred             EEeec---CHHHHHHHHHHHHhcCCC--ccE-EEeecccHHHHHHHHHcCCccEEEEEec
Q 018382          297 GSFIG---SMKETKEMLEFCREKGVT--SMI-EVIKMDYVNKAFERLEKNDVRYRFVVDV  350 (357)
Q Consensus       297 g~~~~---~~~~~~~~~~~~~~~~l~--~~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~  350 (357)
                      ++..+   ..++++++++++.+++++  +.+ ++|+|+++++||+.+++++. +|++|++
T Consensus       318 g~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~-~Kvvi~~  376 (376)
T 1e3i_A          318 GTFFGGWKSVDSVPNLVSDYKNKKFDLDLLVTHALPFESINDAIDLMKEGKS-IRTILTF  376 (376)
T ss_dssp             ECSGGGCCHHHHHHHHHHHHHTTSSCGGGGEEEEEEGGGHHHHHHHHHTTCC-SEEEEEC
T ss_pred             EEecCCCCcHHHHHHHHHHHHcCCCCcHHhEeeeecHHHHHHHHHHHhcCCc-ceEEEeC
Confidence            98754   246899999999999987  467 89999999999999998874 7999874

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.4e-57  Score=419.81  Aligned_cols=337  Identities=28%  Similarity=0.462  Sum_probs=296.3

Q ss_pred             hhhheeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCC-CCCCCCccCccccEEEEEeCCCCCC
Q 018382            6 TERATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLG-MSNYPMVPGHEVVGEVKEVGSEVSN   84 (357)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~-~~~~p~~lG~e~~G~V~~vG~~v~~   84 (357)
                      +|.+|+++++.+.+++++++++|.|+|+++||||||+++++|++|++++.|.++ ...+|.++|||++|+|+++|+++++
T Consensus         2 ~p~~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~vG~~v~~   81 (347)
T 2hcy_A            2 IPETQKGVIFYESHGKLEYKDIPVPKPKANELLINVKYSGVCHTDLHAWHGDWPLPVKLPLVGGHEGAGVVVGMGENVKG   81 (347)
T ss_dssp             CCSEEEEEEESSTTCCCEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSEECCCEEEEEEEEECTTCCS
T ss_pred             CCcccEEEEEeCCCCCCEEEEeeCCCCCCCEEEEEEEEEEechhHHHHhcCCCCCCCCCCcccCccceEEEEEECCCCCC
Confidence            466788888875444799999999999999999999999999999999998765 3467899999999999999999999


Q ss_pred             CCCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccch
Q 018382           85 FKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCA  164 (357)
Q Consensus        85 ~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~  164 (357)
                      |++||||++.+....||.|..|+.|.++.|++....       |...+|+|+||++++++.++++|+++++++||+++++
T Consensus        82 ~~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~-------g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~  154 (347)
T 2hcy_A           82 WKIGDYAGIKWLNGSCMACEYCELGNESNCPHADLS-------GYTHDGSFQQYATADAVQAAHIPQGTDLAQVAPILCA  154 (347)
T ss_dssp             CCTTCEEEECSEEECCSSSTTTTTTCGGGCTTCEEB-------TTTBCCSSBSEEEEETTTSEEECTTCCHHHHGGGGTH
T ss_pred             CcCCCEEEEecCCCCCCCChhhhCCCcccCcccccc-------ccCCCCcceeEEEeccccEEECCCCCCHHHHHHHhhh
Confidence            999999988766667999999999999999876543       3346899999999999999999999999999999999


Q ss_pred             hhhhhhhhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCC-hhH---HH
Q 018382          165 GVTVFSPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSD-ATR---MQ  239 (357)
Q Consensus       165 ~~ta~~~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~-~~~---~~  239 (357)
                      +.|||+++... .+++|++|||+|+ |++|++++|+++..|++|+++++++++.+.+++ +|+++++|.++ .+.   +.
T Consensus       155 ~~ta~~~l~~~-~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~-~g~~~~~d~~~~~~~~~~~~  232 (347)
T 2hcy_A          155 GITVYKALKSA-NLMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRS-IGGEVFIDFTKEKDIVGAVL  232 (347)
T ss_dssp             HHHHHHHHHTT-TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHH-TTCCEEEETTTCSCHHHHHH
T ss_pred             HHHHHHHHHhc-CCCCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHH-cCCceEEecCccHhHHHHHH
Confidence            99999999887 5599999999998 999999999999999999999999888887777 99999888763 332   33


Q ss_pred             HhhC-CccEEEEcCCCCCChHHHHhccccCCeEEEEccCCC-CcccchHHHhhccceEEEEeecCHHHHHHHHHHHHhcC
Q 018382          240 EAAD-SLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINT-PMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKG  317 (357)
Q Consensus       240 ~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~  317 (357)
                      ++.. ++|++||++|....++.++++|+++|+++.+|.... ...++...++.+++++.|+.....++++++++++++++
T Consensus       233 ~~~~~~~D~vi~~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~  312 (347)
T 2hcy_A          233 KATDGGAHGVINVSVSEAAIEASTRYVRANGTTVLVGMPAGAKCCSDVFNQVVKSISIVGSYVGNRADTREALDFFARGL  312 (347)
T ss_dssp             HHHTSCEEEEEECSSCHHHHHHHTTSEEEEEEEEECCCCTTCEEEEEHHHHHHTTCEEEECCCCCHHHHHHHHHHHHTTS
T ss_pred             HHhCCCCCEEEECCCcHHHHHHHHHHHhcCCEEEEEeCCCCCCCCCCHHHHhhCCcEEEEccCCCHHHHHHHHHHHHhCC
Confidence            3332 799999999985478899999999999999988653 34566667788999999998888889999999999999


Q ss_pred             CCccEEEeecccHHHHHHHHHcCCccEEEEEecC
Q 018382          318 VTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVA  351 (357)
Q Consensus       318 l~~~i~~~~~~~~~~a~~~~~~~~~~Gkvvi~~~  351 (357)
                      +++.+++|+++++++||+.+++++..||+|++++
T Consensus       313 l~~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~  346 (347)
T 2hcy_A          313 VKSPIKVVGLSTLPEIYEKMEKGQIVGRYVVDTS  346 (347)
T ss_dssp             CCCCEEEEEGGGHHHHHHHHHTTCCSSEEEEESC
T ss_pred             CccceEEEcHHHHHHHHHHHHcCCcceeEEEecC
Confidence            9987899999999999999999888899999875

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=3.1e-57  Score=422.77  Aligned_cols=341  Identities=22%  Similarity=0.331  Sum_probs=289.2

Q ss_pred             hhhhheeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCC
Q 018382            5 DTERATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSN   84 (357)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~   84 (357)
                      +.+++|+++++.+.+++++++++|.|+|+++||||||+++++|++|++++.|.++ ..+|.++|||++|+|+++|++|++
T Consensus         2 s~~~~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-~~~P~v~GhE~~G~V~~vG~~v~~   80 (371)
T 1f8f_A            2 SELKDIIAAVTPCKGADFELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYP-VPLPAVLGHEGSGIIEAIGPNVTE   80 (371)
T ss_dssp             --CEEEEEEEBCSTTCCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSC-CCSSBCCCCEEEEEEEEECTTCCS
T ss_pred             CccccceEEEEcCCCCCeEEEEecCCCCCCCEEEEEEEEeecCchhHHHHcCCCC-CCCCcccCcccceEEEEeCCCCCC
Confidence            3467899999875555799999999999999999999999999999999999765 457999999999999999999999


Q ss_pred             CCCCCEEEEccccCCCCCCcccccCccccccccccc-Cccc-------c--CCCC------CCCCccceEEEeeCcceEE
Q 018382           85 FKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWS-YNDV-------Y--TDGK------PTQGGFAESMVVDQKFVVK  148 (357)
Q Consensus        85 ~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~-------~--~~~~------~~~G~~~~~~~v~~~~~~~  148 (357)
                      |++||||++.+  ..||.|..|+.|+++.|++.... ..+.       +  .+|.      ...|+|+||++++++.+++
T Consensus        81 ~~~GdrV~~~~--~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~~g~~~~~~~~~~G~~aey~~v~~~~~~~  158 (371)
T 1f8f_A           81 LQVGDHVVLSY--GYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVK  158 (371)
T ss_dssp             CCTTCEEEECC--CCCSSSHHHHTTCGGGCTTHHHHSSSSSCSSSCCSBC------CBCCGGGTCCSBSEEEEEGGGEEE
T ss_pred             CCCCCEEEecC--CCCCCChhhhCcCccccccccccccccccccccccccccCCccccccccCCccccCeEEechhheEE
Confidence            99999998776  67999999999999999876421 1000       0  0111      1369999999999999999


Q ss_pred             CCCCCCccccccccchhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCc
Q 018382          149 IPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGAD  227 (357)
Q Consensus       149 lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~  227 (357)
                      +|+++++++||++++++.|||+++.+...+++|++|||+|+|++|++++|+|+..|+ +|+++++++++.+.+++ +|++
T Consensus       159 iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~-lGa~  237 (371)
T 1f8f_A          159 VTKDVPIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQ-LGAT  237 (371)
T ss_dssp             ECTTSCGGGTGGGGTHHHHHHHHHHTTTCCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHH-HTCS
T ss_pred             CCCCCCHHHHHHhcchHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHH-cCCC
Confidence            999999999999999999999999766677999999999999999999999999999 69999999999888877 9999


Q ss_pred             EEEcCCChhHHH---HhhC-CccEEEEcCCCCCChHHHHhccccCCeEEEEccCCC--CcccchHHHhhccceEEEEeec
Q 018382          228 QYLVSSDATRMQ---EAAD-SLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINT--PMQFLTPMVMLGRKAITGSFIG  301 (357)
Q Consensus       228 ~vv~~~~~~~~~---~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~~~i~g~~~~  301 (357)
                      +++++++.+..+   +++. ++|+|||++|....+..++++++++|+++.+|....  ...++...++.+++++.+++..
T Consensus       238 ~vi~~~~~~~~~~~~~~~~gg~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~  317 (371)
T 1f8f_A          238 HVINSKTQDPVAAIKEITDGGVNFALESTGSPEILKQGVDALGILGKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVEG  317 (371)
T ss_dssp             EEEETTTSCHHHHHHHHTTSCEEEEEECSCCHHHHHHHHHTEEEEEEEEECCCCSTTCCCCCCHHHHHHTTCEEEECSGG
T ss_pred             EEecCCccCHHHHHHHhcCCCCcEEEECCCCHHHHHHHHHHHhcCCEEEEeCCCCCCCccccCHHHHHhCCCEEEEeCCC
Confidence            999987654433   3333 799999999985478899999999999999987653  2456666778899999998764


Q ss_pred             C---HHHHHHHHHHHHhcCCCc--cE-EEeecccHHHHHHHHHcCCccEEEEEecC
Q 018382          302 S---MKETKEMLEFCREKGVTS--MI-EVIKMDYVNKAFERLEKNDVRYRFVVDVA  351 (357)
Q Consensus       302 ~---~~~~~~~~~~~~~~~l~~--~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~~  351 (357)
                      .   .+++++++++++++++++  .+ + |+++++++||+.+++++. +|++++++
T Consensus       318 ~~~~~~~~~~~~~l~~~g~l~~~~~i~~-~~l~~~~~A~~~~~~~~~-~Kvvv~~~  371 (371)
T 1f8f_A          318 SGSPKKFIPELVRLYQQGKFPFDQLVKF-YAFDEINQAAIDSRKGIT-LKPIIKIA  371 (371)
T ss_dssp             GSCHHHHHHHHHHHHHTTSCCGGGGEEE-EEGGGHHHHHHHHHHTSC-SEEEEECC
T ss_pred             CCchHHHHHHHHHHHHcCCCCcccceeE-ecHHHHHHHHHHHHCCCc-eEEEEeeC
Confidence            3   367899999999999986  47 6 999999999999998876 79999863

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=100.00  E-value=1.6e-57  Score=423.90  Aligned_cols=335  Identities=23%  Similarity=0.340  Sum_probs=291.0

Q ss_pred             chhhhheeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCC
Q 018382            4 LDTERATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVS   83 (357)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~   83 (357)
                      +.+|++|+++++. +++.++++++|.|+|+++||||||.++++|++|++++.|.++ ..+|.++|||++|+|+++|++++
T Consensus        18 ~~~p~~mkA~v~~-~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~-~~~p~v~G~e~~G~V~~vG~~v~   95 (370)
T 4ej6_A           18 LYFQSMMKAVRLE-SVGNISVRNVGIPEPGPDDLLVKVEACGICGTDRHLLHGEFP-STPPVTLGHEFCGIVVEAGSAVR   95 (370)
T ss_dssp             ---CCEEEEEEEE-ETTEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTSSC-CCSSEECCCSEEEEEEEECTTCC
T ss_pred             cccchheEEEEEe-cCCceEEEEccCCCCCCCeEEEEEEEEeecHHHHHHHcCCCC-CCCCeecCcceEEEEEEECCCCC
Confidence            3578889999987 457899999999999999999999999999999999999874 46799999999999999999999


Q ss_pred             CCCCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccc
Q 018382           84 NFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLC  163 (357)
Q Consensus        84 ~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~  163 (357)
                      +|++||||++.+. ..||.|.+|+.|.++.|......       |...+|+|+||++++++.++++|+++++++|| ++.
T Consensus        96 ~~~vGdrV~~~~~-~~cg~C~~C~~g~~~~C~~~~~~-------g~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa-l~~  166 (370)
T 4ej6_A           96 DIAPGARITGDPN-ISCGRCPQCQAGRVNLCRNLRAI-------GIHRDGGFAEYVLVPRKQAFEIPLTLDPVHGA-FCE  166 (370)
T ss_dssp             SSCTTCEEEECCE-ECCSSSHHHHTTCGGGCTTCEEB-------TTTBCCSSBSEEEEEGGGEEEECTTSCTTGGG-GHH
T ss_pred             CCCCCCEEEECCC-CCCCCChHHhCcCcccCCCcccc-------CCCCCCcceEEEEEchhhEEECCCCCCHHHHh-hhh
Confidence            9999999987665 56999999999999999986544       34478999999999999999999999999998 777


Q ss_pred             hhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhh
Q 018382          164 AGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAA  242 (357)
Q Consensus       164 ~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~  242 (357)
                      ++.+||+++.... +++|++|||+|+|++|++++|+|+..|+ +|+++++++++.+.+++ +|+++++|+++.+..+.+.
T Consensus       167 ~~~ta~~~l~~~~-~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~-lGa~~vi~~~~~~~~~~i~  244 (370)
T 4ej6_A          167 PLACCLHGVDLSG-IKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEE-VGATATVDPSAGDVVEAIA  244 (370)
T ss_dssp             HHHHHHHHHHHHT-CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHH-HTCSEEECTTSSCHHHHHH
T ss_pred             HHHHHHHHHHhcC-CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-cCCCEEECCCCcCHHHHHH
Confidence            8999999995554 5999999999999999999999999999 89999999999888877 9999999988766555443


Q ss_pred             C-------CccEEEEcCCCCCChHHHHhccccCCeEEEEccCCC--CcccchHHHhhccceEEEEeecCHHHHHHHHHHH
Q 018382          243 D-------SLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINT--PMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFC  313 (357)
Q Consensus       243 ~-------~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~  313 (357)
                      +       ++|+|||++|....+..++++++++|+++.+|....  ...++...++.+++++.|++... ++++++++++
T Consensus       245 ~~~~~~~gg~Dvvid~~G~~~~~~~~~~~l~~~G~vv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~-~~~~~~~~l~  323 (370)
T 4ej6_A          245 GPVGLVPGGVDVVIECAGVAETVKQSTRLAKAGGTVVILGVLPQGEKVEIEPFDILFRELRVLGSFINP-FVHRRAADLV  323 (370)
T ss_dssp             STTSSSTTCEEEEEECSCCHHHHHHHHHHEEEEEEEEECSCCCTTCCCCCCHHHHHHTTCEEEECCSCT-TCHHHHHHHH
T ss_pred             hhhhccCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEeccCCCCccccCHHHHHhCCcEEEEeccCh-HHHHHHHHHH
Confidence            2       799999999976578999999999999999998665  45677778889999999998765 5699999999


Q ss_pred             HhcCCC--ccE-EEeecccHHHHHHHHHcCC-ccEEEEEecCC
Q 018382          314 REKGVT--SMI-EVIKMDYVNKAFERLEKND-VRYRFVVDVAG  352 (357)
Q Consensus       314 ~~~~l~--~~i-~~~~~~~~~~a~~~~~~~~-~~Gkvvi~~~~  352 (357)
                      ++|+++  +.+ ++|+++++++||+.+.+++ ..+|+++++++
T Consensus       324 ~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~kvv~~~~~  366 (370)
T 4ej6_A          324 ATGAIEIDRMISRRISLDEAPDVISNPAAAGEVKVLVIPSAER  366 (370)
T ss_dssp             HTTCSCCGGGEEEEECGGGHHHHHHSCCCTTCSEEEECCC---
T ss_pred             HcCCCChhHcEEEEEEHHHHHHHHHHHHcCCCCeEEEEEcccc
Confidence            999996  457 9999999999999998877 44788887754

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=100.00  E-value=8.2e-57  Score=420.27  Aligned_cols=341  Identities=22%  Similarity=0.308  Sum_probs=289.4

Q ss_pred             hhhheeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCC
Q 018382            6 TERATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNF   85 (357)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~   85 (357)
                      +|++|+++++.+.+++++++++|.|+|+++||||||+++++|++|++++.|..+...+|.++|||++|+|+++|++|++|
T Consensus         3 ~p~~mkA~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G~V~~vG~~V~~~   82 (373)
T 2fzw_A            3 EVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHLGAGIVESVGEGVTKL   82 (373)
T ss_dssp             CCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTCCTTCCSSBCCCCEEEEEEEEECTTCCSC
T ss_pred             CccceEEEEEecCCCCcEEEEeeCCCCCCCEEEEEEEEEEEchhhHHHhcCCCCCCCCCccccccccEEEEEECCCCCCC
Confidence            47889999987655579999999999999999999999999999999999987655789999999999999999999999


Q ss_pred             CCCCEEEEccccCCCCCCcccccCcccccccccccCc-cccC-------------CCCCCCCccceEEEeeCcceEECCC
Q 018382           86 KVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYN-DVYT-------------DGKPTQGGFAESMVVDQKFVVKIPD  151 (357)
Q Consensus        86 ~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~-------------~~~~~~G~~~~~~~v~~~~~~~lP~  151 (357)
                      ++||||++.+. ..||.|..|+.|.++.|+....... +...             .+....|+|+||++++++.++++|+
T Consensus        83 ~vGdrV~~~~~-~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~  161 (373)
T 2fzw_A           83 KAGDTVIPLYI-PQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDP  161 (373)
T ss_dssp             CTTCEEEECSS-CCCSCSHHHHCTTCCCCCTTHHHHHTTCCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEECCT
T ss_pred             CCCCEEEECCC-CCCCCChHHcCcCcccCCCcccccccccccCCcccccccccccccccCCccceeEEEEchhheEECCC
Confidence            99999977654 5699999999999999987532100 1100             1112469999999999999999999


Q ss_pred             CCCccccccccchhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCcEEE
Q 018382          152 GMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGADQYL  230 (357)
Q Consensus       152 ~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~~vv  230 (357)
                      ++++++||++++++.|||+++.+...+++|++|||+|+|++|++++|+|+..|+ +|+++++++++.+.+++ +|+++++
T Consensus       162 ~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~-lGa~~vi  240 (373)
T 2fzw_A          162 LAPLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKE-FGATECI  240 (373)
T ss_dssp             TSCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH-HTCSEEE
T ss_pred             CCCHHHHhhhccHHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH-cCCceEe
Confidence            999999999999999999998777777999999999999999999999999999 89999999999988887 9999999


Q ss_pred             cCCC--hhH---HHHhh-CCccEEEEcCCCCCChHHHHhccccC-CeEEEEccCCC--CcccchHHHhhccceEEEEeec
Q 018382          231 VSSD--ATR---MQEAA-DSLDYIIDTVPANHPLEPYLSLLKLD-GKLILTGVINT--PMQFLTPMVMLGRKAITGSFIG  301 (357)
Q Consensus       231 ~~~~--~~~---~~~~~-~~~d~v~d~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~i~g~~~~  301 (357)
                      |+++  .+.   +.+++ +++|+|||++|....+..++++++++ |+++.+|....  ...++...++.++ ++.++..+
T Consensus       241 ~~~~~~~~~~~~v~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~-~i~g~~~~  319 (373)
T 2fzw_A          241 NPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQLVTGR-TWKGTAFG  319 (373)
T ss_dssp             CGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTTCCEEECTHHHHTTC-EEEECSGG
T ss_pred             ccccccccHHHHHHHHhCCCCCEEEECCCcHHHHHHHHHhhccCCcEEEEEecCCCCceeeeCHHHHhcCC-EEEEeccC
Confidence            8764  223   33333 37999999999855788999999999 99999987653  2445566666777 99998754


Q ss_pred             ---CHHHHHHHHHHHHhcCCC--ccE-EEeecccHHHHHHHHHcCCccEEEEEec
Q 018382          302 ---SMKETKEMLEFCREKGVT--SMI-EVIKMDYVNKAFERLEKNDVRYRFVVDV  350 (357)
Q Consensus       302 ---~~~~~~~~~~~~~~~~l~--~~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~  350 (357)
                         ..++++++++++.+++++  +.+ ++|+++++++||+.+++++. +|+++++
T Consensus       320 ~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvi~~  373 (373)
T 2fzw_A          320 GWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINKAFELMHSGKS-IRTVVKI  373 (373)
T ss_dssp             GCCHHHHHHHHHHHHHTTSSCSGGGEEEEEEGGGHHHHHHHHHHTCC-SEEEEEC
T ss_pred             CCCcHHHHHHHHHHHHcCCCCchheEeEEeeHHHHHHHHHHHhCCCc-ceEEEeC
Confidence               246899999999999987  467 89999999999999998876 6999874

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=100.00  E-value=4.8e-57  Score=417.89  Aligned_cols=332  Identities=25%  Similarity=0.322  Sum_probs=274.3

Q ss_pred             hhheeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhc-CCC--CCCCCCccCccccEEEEEeCCCCC
Q 018382            7 ERATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKN-DLG--MSNYPMVPGHEVVGEVKEVGSEVS   83 (357)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g-~~~--~~~~p~~lG~e~~G~V~~vG~~v~   83 (357)
                      |++|+++++.+.+..++++++|.|+|+++||||||.++++|++|++++.| .++  ...+|.++|||++|+|+++|++++
T Consensus         2 m~~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~v~   81 (348)
T 2d8a_A            2 SEKMVAIMKTKPGYGAELVEVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIMGHEVAGEVVEIGPGVE   81 (348)
T ss_dssp             -CEEEEEEECSSSSSCEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCTTHHHHCCSSEECCCEEEEEEEEECTTCC
T ss_pred             CCcceEEEEECCCCCEEEEECCCCCCCcCEEEEEEeEEEecHHHHHHHcCCCCCcccCCCCCccCccceEEEEEECCCCC
Confidence            45688888764333899999999999999999999999999999999998 432  246789999999999999999999


Q ss_pred             CCCCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccc
Q 018382           84 NFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLC  163 (357)
Q Consensus        84 ~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~  163 (357)
                      +|++||||++.+.. .||.|.+|++|.++.|+...+.       |...+|+|+||++++++.++++|+++++++||++. 
T Consensus        82 ~~~vGdrV~~~~~~-~cg~C~~C~~g~~~~C~~~~~~-------g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~-  152 (348)
T 2d8a_A           82 GIEVGDYVSVETHI-VCGKCYACRRGQYHVCQNTKIF-------GVDTDGVFAEYAVVPAQNIWKNPKSIPPEYATLQE-  152 (348)
T ss_dssp             SCCTTCEEEECCEE-CCSCCC------------CEET-------TTSSCCSSBSEEEEEGGGEEECCTTSCHHHHTTHH-
T ss_pred             cCCCCCEEEEcCCC-CCCCChhhhCcCcccCCCCCee-------cCCCCCcCcceEEeChHHeEECCCCCCHHHHHhhh-
Confidence            99999999876554 6999999999999999976543       33467999999999999999999999999999875 


Q ss_pred             hhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHH---
Q 018382          164 AGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQ---  239 (357)
Q Consensus       164 ~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~---  239 (357)
                      ++.|||+++. ...+ +|++|||+|+|++|++++|+|+..|+ +|+++++++++.+.+++ +|+++++|+++.+..+   
T Consensus       153 ~~~ta~~~l~-~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~-~Ga~~~~~~~~~~~~~~v~  229 (348)
T 2d8a_A          153 PLGNAVDTVL-AGPI-SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKK-VGADYVINPFEEDVVKEVM  229 (348)
T ss_dssp             HHHHHHHHHT-TSCC-TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHH-HTCSEEECTTTSCHHHHHH
T ss_pred             HHHHHHHHHH-hcCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-hCCCEEECCCCcCHHHHHH
Confidence            7889999995 4566 99999999999999999999999999 99999999999888887 9999999987654433   


Q ss_pred             HhhC--CccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCcccch-HHHhhccceEEEEeecC-HHHHHHHHHHHHh
Q 018382          240 EAAD--SLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLT-PMVMLGRKAITGSFIGS-MKETKEMLEFCRE  315 (357)
Q Consensus       240 ~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~-~~~~~~~~~i~g~~~~~-~~~~~~~~~~~~~  315 (357)
                      ++++  ++|+|||++|....+..++++++++|+++.+|.......++. ..++.+++++.|++... .++++++++++.+
T Consensus       230 ~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~  309 (348)
T 2d8a_A          230 DITDGNGVDVFLEFSGAPKALEQGLQAVTPAGRVSLLGLYPGKVTIDFNNLIIFKALTIYGITGRHLWETWYTVSRLLQS  309 (348)
T ss_dssp             HHTTTSCEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCSSCCCCCHHHHTTTTTCEEEECCCCCSHHHHHHHHHHHHH
T ss_pred             HHcCCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCCCcccCchHHHHhCCcEEEEecCCCcHHHHHHHHHHHHc
Confidence            3333  799999999985478899999999999999988665555666 67788999999988766 7889999999999


Q ss_pred             cCC--CccE-EEee-cccHHHHHHHHHcCCccEEEEEecC
Q 018382          316 KGV--TSMI-EVIK-MDYVNKAFERLEKNDVRYRFVVDVA  351 (357)
Q Consensus       316 ~~l--~~~i-~~~~-~~~~~~a~~~~~~~~~~Gkvvi~~~  351 (357)
                      |++  ++.+ ++|+ ++++++||+.+++ ...||++++++
T Consensus       310 g~i~~~~~i~~~~~gl~~~~~A~~~~~~-~~~gKvvi~~~  348 (348)
T 2d8a_A          310 GKLNLDPIITHKYKGFDKYEEAFELMRA-GKTGKVVFMLK  348 (348)
T ss_dssp             TCCCCTTTEEEEEESSTTHHHHHHHHHT-TCCSEEEEEC-
T ss_pred             CCCChHHhheeeCCCHHHHHHHHHHHhC-CCceEEEEeeC
Confidence            985  5677 8999 9999999999987 56799999864

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=2e-56  Score=417.76  Aligned_cols=341  Identities=23%  Similarity=0.341  Sum_probs=289.7

Q ss_pred             hhhhheeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHH-HHhcCCCCCCCCCccCccccEEEEEeCCCCC
Q 018382            5 DTERATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIH-QIKNDLGMSNYPMVPGHEVVGEVKEVGSEVS   83 (357)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~-~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~   83 (357)
                      ..|++|+++++.+.+++++++++|.|+|+++||||||.++++|++|++ ++.|..+ ..+|.++|||++|+|+++|++|+
T Consensus         4 ~~~~~mka~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~-~~~P~v~GhE~~G~V~~vG~~V~   82 (374)
T 1cdo_A            4 GKVIKCKAAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHK-DGFPVVLGHEGAGIVESVGPGVT   82 (374)
T ss_dssp             TSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTTCCT-TSCSEECCCCEEEEEEEECTTCC
T ss_pred             CCcceeEEEEEecCCCCeEEEEeeCCCCCCCEEEEEEeEEeechhhHHHHhCCCCC-CCCCcccCccceEEEEEECCCCc
Confidence            567889999987655579999999999999999999999999999999 8988765 56799999999999999999999


Q ss_pred             CCCCCCEEEEccccCCCCCCcccccCcccccccccccCc-cccCCCC-------------CCCCccceEEEeeCcceEEC
Q 018382           84 NFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYN-DVYTDGK-------------PTQGGFAESMVVDQKFVVKI  149 (357)
Q Consensus        84 ~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-------------~~~G~~~~~~~v~~~~~~~l  149 (357)
                      +|++||||++.+. ..||.|.+|+.|++|.|+....... +...+|.             ...|+|+||++++++.++++
T Consensus        83 ~~~vGdrV~~~~~-~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~~  161 (374)
T 1cdo_A           83 EFQPGEKVIPLFI-SQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKI  161 (374)
T ss_dssp             SCCTTCEEEECSS-CCCSSSHHHHCTTCCCCSCSGGGTCTTTTSCSCCCEEETTEEEEEGGGTCCSBSEEEEEGGGEEEC
T ss_pred             cCCCCCEEEeCCC-CCCCCChhhcCCCcCcCCCcccccccccccCCccccccCCcccccccCCccceeEEEEchhheEEC
Confidence            9999999977654 4699999999999999997643210 1111111             13599999999999999999


Q ss_pred             CCCCCccccccccchhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCcE
Q 018382          150 PDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGADQ  228 (357)
Q Consensus       150 P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~~  228 (357)
                      |+++++++||++++++.|||+++.+...+++|++|||+|+|++|++++|+|+..|+ +|+++++++++.+.+++ +|+++
T Consensus       162 P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~-lGa~~  240 (374)
T 1cdo_A          162 DPSAPLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKV-FGATD  240 (374)
T ss_dssp             CTTCCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-TTCCE
T ss_pred             CCCCCHHHHhhhccHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH-hCCce
Confidence            99999999999999999999998777777999999999999999999999999999 89999999999988887 99999


Q ss_pred             EEcCCC--hhH---HHHhh-CCccEEEEcCCCCCChHHHHhccccC-CeEEEEccCCC-CcccchHHHhhccceEEEEee
Q 018382          229 YLVSSD--ATR---MQEAA-DSLDYIIDTVPANHPLEPYLSLLKLD-GKLILTGVINT-PMQFLTPMVMLGRKAITGSFI  300 (357)
Q Consensus       229 vv~~~~--~~~---~~~~~-~~~d~v~d~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~  300 (357)
                      ++|+++  .+.   +.+++ +++|+|||++|....+..++++++++ |+++.+|.... ...++...++.++ ++.++..
T Consensus       241 vi~~~~~~~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~-~i~g~~~  319 (374)
T 1cdo_A          241 FVNPNDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLHDVATRPIQLIAGR-TWKGSMF  319 (374)
T ss_dssp             EECGGGCSSCHHHHHHHHHTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCSSSCEEECHHHHHTTC-EEEECSG
T ss_pred             EEeccccchhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCcEEEEEcCCCCCCcccCHHHHhcCC-eEEEEec
Confidence            998764  222   33333 37999999999854788999999999 99999987654 3445666677777 9999875


Q ss_pred             c---CHHHHHHHHHHHHhcCCC--ccE-EEeecccHHHHHHHHHcCCccEEEEEec
Q 018382          301 G---SMKETKEMLEFCREKGVT--SMI-EVIKMDYVNKAFERLEKNDVRYRFVVDV  350 (357)
Q Consensus       301 ~---~~~~~~~~~~~~~~~~l~--~~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~  350 (357)
                      +   ..++++++++++.+++++  +.+ ++|+++++++||+.+++++. +|++|++
T Consensus       320 ~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvi~~  374 (374)
T 1cdo_A          320 GGFKGKDGVPKMVKAYLDKKVKLDEFITHRMPLESVNDAIDLMKHGKC-IRTVLSL  374 (374)
T ss_dssp             GGCCHHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHTTCC-SEEEEEC
T ss_pred             CCCCcHHHHHHHHHHHHcCCCChHHheeeEecHHHHHHHHHHHHCCCe-eEEEEeC
Confidence            4   246799999999999987  467 89999999999999998875 6999875

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=100.00  E-value=3e-56  Score=416.47  Aligned_cols=341  Identities=23%  Similarity=0.347  Sum_probs=289.2

Q ss_pred             hhhhheeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCC
Q 018382            5 DTERATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSN   84 (357)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~   84 (357)
                      ..|++|+++++.+.+++++++++|.|+|+++||||||.++++|++|++++.|..+.. +|.++|||++|+|+++|++|++
T Consensus         4 ~~~~~mkA~~~~~~g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~-~P~v~GhE~~G~V~~vG~~v~~   82 (374)
T 2jhf_A            4 GKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTP-LPVIAGHEAAGIVESIGEGVTT   82 (374)
T ss_dssp             TSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTSSCCC-SSBCCCCSEEEEEEEECTTCCS
T ss_pred             CCceeEEEEEEecCCCceEEEEccCCCCCCCeEEEEEeEEeechhhHHHHcCCCCCC-CCcccCcCceEEEEEECCCCCC
Confidence            457889999987655579999999999999999999999999999999999976643 7999999999999999999999


Q ss_pred             CCCCCEEEEccccCCCCCCcccccCcccccccccccCc-cccCCC-------------CCCCCccceEEEeeCcceEECC
Q 018382           85 FKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYN-DVYTDG-------------KPTQGGFAESMVVDQKFVVKIP  150 (357)
Q Consensus        85 ~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~-------------~~~~G~~~~~~~v~~~~~~~lP  150 (357)
                      |++||||++.+. ..||.|..|+.|.++.|++...... +...++             ....|+|+||++++++.++++|
T Consensus        83 ~~vGdrV~~~~~-~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP  161 (374)
T 2jhf_A           83 VRPGDKVIPLFT-PQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKID  161 (374)
T ss_dssp             CCTTCEEEECSS-CCCSCSHHHHSTTCCCCTTCSSSSCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEEGGGEEECC
T ss_pred             CCCCCEEEECCC-CCCCCCccccCCCcCcCCCCccccccccccCCcccccccccccccccCCccCeeEEEEchHHeEECC
Confidence            999999977654 5699999999999999997643210 111111             1135999999999999999999


Q ss_pred             CCCCccccccccchhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCcEE
Q 018382          151 DGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGADQY  229 (357)
Q Consensus       151 ~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~~v  229 (357)
                      +++++++||++++++.|||+++.+...+++|++|||+|+|++|++++|+|+..|+ +|+++++++++.+.+++ +|++++
T Consensus       162 ~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~-lGa~~v  240 (374)
T 2jhf_A          162 AASPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKE-VGATEC  240 (374)
T ss_dssp             TTCCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-TTCSEE
T ss_pred             CCCCHHHhhhhccHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH-hCCceE
Confidence            9999999999999999999998777777999999999999999999999999999 89999999999988877 999999


Q ss_pred             EcCCC--hhH---HHHhh-CCccEEEEcCCCCCChHHHHhccccC-CeEEEEccCCC--CcccchHHHhhccceEEEEee
Q 018382          230 LVSSD--ATR---MQEAA-DSLDYIIDTVPANHPLEPYLSLLKLD-GKLILTGVINT--PMQFLTPMVMLGRKAITGSFI  300 (357)
Q Consensus       230 v~~~~--~~~---~~~~~-~~~d~v~d~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~i~g~~~  300 (357)
                      +|+++  .+.   +.++. +++|+|||++|....+..++++++++ |+++.+|....  ...++...++.++ ++.+++.
T Consensus       241 i~~~~~~~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~-~i~g~~~  319 (374)
T 2jhf_A          241 VNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGR-TWKGAIF  319 (374)
T ss_dssp             ECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHHBCTTTCEEEECSCCCTTCCEEECTHHHHTTC-EEEECSG
T ss_pred             ecccccchhHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhcCCcEEEEeccCCCCCccccCHHHHhcCC-eEEEecc
Confidence            98764  222   33333 37999999999855788999999999 99999987653  2445666677777 9999875


Q ss_pred             cC---HHHHHHHHHHHHhcCCCc--cE-EEeecccHHHHHHHHHcCCccEEEEEec
Q 018382          301 GS---MKETKEMLEFCREKGVTS--MI-EVIKMDYVNKAFERLEKNDVRYRFVVDV  350 (357)
Q Consensus       301 ~~---~~~~~~~~~~~~~~~l~~--~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~  350 (357)
                      +.   .++++++++++.++++++  .+ ++|+++++++||+.+++++. +|+++++
T Consensus       320 ~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~-~Kvvi~~  374 (374)
T 2jhf_A          320 GGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGES-IRTILTF  374 (374)
T ss_dssp             GGCCHHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHTTCC-SEEEEEC
T ss_pred             CCCChHHHHHHHHHHHHcCCCCchhheEEEEeHHHHHHHHHHHHCCCc-ceEEEeC
Confidence            42   468999999999999874  57 89999999999999998875 6999874

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=100.00  E-value=5.7e-57  Score=417.01  Aligned_cols=334  Identities=26%  Similarity=0.405  Sum_probs=291.7

Q ss_pred             eeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCC--CCCCCCccCccccEEEEEeCCCCCCCCC
Q 018382           10 TIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLG--MSNYPMVPGHEVVGEVKEVGSEVSNFKV   87 (357)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~--~~~~p~~lG~e~~G~V~~vG~~v~~~~~   87 (357)
                      |+++++.+.+++++++++|.|+|+++||||||+++++|++|+++++|..+  ...+|.++|||++|+|+++|+++++|++
T Consensus         1 MkA~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~v   80 (345)
T 3jv7_A            1 MKAVQYTEIGSEPVVVDIPTPTPGPGEILLKVTAAGLCHSDIFVMDMPAAQYAYGLPLTLGHEGVGTVAELGEGVTGFGV   80 (345)
T ss_dssp             CEEEEECSTTSCCEEEECCCCCCCTTCEEEEEEEEECCHHHHHHHHSCTTTCCSCSSEECCSEEEEEEEEECTTCCSCCT
T ss_pred             CeEEEEcCCCCceEEEEecCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCCccCCCCCcccCcccEEEEEEECCCCCCCCC
Confidence            57777765555689999999999999999999999999999999999765  2567899999999999999999999999


Q ss_pred             CCEEEEccccCCCCCCcccccCcccccc-cccccCccccCCCCCCCCccceEEEee-CcceEECCCCCCccccccccchh
Q 018382           88 GDKVGVGVLVGCCRNCRPCEADVEQYCN-KKIWSYNDVYTDGKPTQGGFAESMVVD-QKFVVKIPDGMALEQAAPLLCAG  165 (357)
Q Consensus        88 Gd~V~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~G~~~~~~~v~-~~~~~~lP~~l~~~~aa~~~~~~  165 (357)
                      ||||++.+ ...||.|..|++|.++.|. ...+...   ..|...+|+|+||++++ ++.++++|+ +++++||++++++
T Consensus        81 GdrV~~~~-~~~cg~C~~c~~g~~~~c~~~~~~~~~---~~g~~~~G~~aey~~v~~~~~~~~~p~-~~~~~aa~l~~~~  155 (345)
T 3jv7_A           81 GDAVAVYG-PWGCGACHACARGRENYCTRAADLGIT---PPGLGSPGSMAEYMIVDSARHLVPIGD-LDPVAAAPLTDAG  155 (345)
T ss_dssp             TCEEEECC-SCCCSSSHHHHTTCGGGCSSHHHHTCC---CBTTTBCCSSBSEEEESCGGGEEECTT-CCHHHHGGGGTTT
T ss_pred             CCEEEEec-CCCCCCChHHHCcCcCcCccccccccc---cCCcCCCceeeEEEEecchhceEeCCC-CCHHHhhhhhhhH
Confidence            99997755 4579999999999999994 3322111   12445789999999999 999999999 9999999999999


Q ss_pred             hhhhhhhhc-cCCCCCCCeEEEEecChHHHHHHHHHHHc-CCeEEEEeCCcHHHHHHHHhcCCcEEEcCCCh--hHHHHh
Q 018382          166 VTVFSPLSH-FGLKQSGLRGGILGLGGVGHMGVLIAKAM-GHHVTVISSSDKKRVEAMEHLGADQYLVSSDA--TRMQEA  241 (357)
Q Consensus       166 ~ta~~~l~~-~~~~~~~~~VlI~G~g~~G~~ai~la~~~-g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~--~~~~~~  241 (357)
                      .|||+++.+ ...+++|++|||+|+|++|++++|+|+.. +++|+++++++++.+.+++ +|+++++++++.  +.+.++
T Consensus       156 ~ta~~~l~~~~~~~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~-lGa~~~i~~~~~~~~~v~~~  234 (345)
T 3jv7_A          156 LTPYHAISRVLPLLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALARE-VGADAAVKSGAGAADAIREL  234 (345)
T ss_dssp             HHHHHHHHTTGGGCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHH-TTCSEEEECSTTHHHHHHHH
T ss_pred             HHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH-cCCCEEEcCCCcHHHHHHHH
Confidence            999999998 45669999999999999999999999999 6799999999999998888 999999988762  233344


Q ss_pred             hC--CccEEEEcCCCCCChHHHHhccccCCeEEEEccCCC-CcccchHHHhhccceEEEEeecCHHHHHHHHHHHHhcCC
Q 018382          242 AD--SLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINT-PMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGV  318 (357)
Q Consensus       242 ~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l  318 (357)
                      ++  ++|+|||++|....++.++++++++|+++.+|.... ...++. .++.+++++.+++.++.++++++++++++|++
T Consensus       235 t~g~g~d~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~-~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l  313 (345)
T 3jv7_A          235 TGGQGATAVFDFVGAQSTIDTAQQVVAVDGHISVVGIHAGAHAKVGF-FMIPFGASVVTPYWGTRSELMEVVALARAGRL  313 (345)
T ss_dssp             HGGGCEEEEEESSCCHHHHHHHHHHEEEEEEEEECSCCTTCCEEEST-TTSCTTCEEECCCSCCHHHHHHHHHHHHTTCC
T ss_pred             hCCCCCeEEEECCCCHHHHHHHHHHHhcCCEEEEECCCCCCCCCcCH-HHHhCCCEEEEEecCCHHHHHHHHHHHHcCCC
Confidence            43  899999999997678999999999999999998765 455554 67789999999999999999999999999999


Q ss_pred             CccEEEeecccHHHHHHHHHcCCccEEEEEec
Q 018382          319 TSMIEVIKMDYVNKAFERLEKNDVRYRFVVDV  350 (357)
Q Consensus       319 ~~~i~~~~~~~~~~a~~~~~~~~~~Gkvvi~~  350 (357)
                      ++.+++|+++++++||+.+++++..||+|+++
T Consensus       314 ~~~~~~~~l~~~~~A~~~~~~~~~~Gkvvv~p  345 (345)
T 3jv7_A          314 DIHTETFTLDEGPAAYRRLREGSIRGRGVVVP  345 (345)
T ss_dssp             CCCEEEECSTTHHHHHHHHHHTCCSSEEEECC
T ss_pred             ceEEEEEcHHHHHHHHHHHHcCCCceeEEeCC
Confidence            98669999999999999999999999999864

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=100.00  E-value=7.9e-57  Score=417.59  Aligned_cols=338  Identities=22%  Similarity=0.317  Sum_probs=289.5

Q ss_pred             hhheeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCC-C--CCCCCCccCccccEEEEEeCCCCC
Q 018382            7 ERATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDL-G--MSNYPMVPGHEVVGEVKEVGSEVS   83 (357)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~-~--~~~~p~~lG~e~~G~V~~vG~~v~   83 (357)
                      +|+|+++++.+ ++.++++++|.|+|+++||||||.++++|++|++++.|.. +  ...+|.++|||++|+|+++|++|+
T Consensus         5 ~~~mka~~~~~-~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~V~   83 (356)
T 1pl8_A            5 KPNNLSLVVHG-PGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSVK   83 (356)
T ss_dssp             CCCCEEEEEEE-TTEEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSEETTEECSSCEECCCEEEEEEEEECTTCC
T ss_pred             ccCceEEEEec-CCcEEEEEccCCCCCCCeEEEEEEEeeeCHHHHHHHcCCCCCCccCCCCcccccceEEEEEEECCCCC
Confidence            35688888764 5689999999999999999999999999999999988532 1  135689999999999999999999


Q ss_pred             CCCCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccc
Q 018382           84 NFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLC  163 (357)
Q Consensus        84 ~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~  163 (357)
                      +|++||||++.+.. .||.|..|+.|.++.|+...+.+.      ...+|+|+||++++++.++++|+++++++||++ .
T Consensus        84 ~~~vGdrV~~~~~~-~cg~C~~C~~g~~~~C~~~~~~g~------~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~~-~  155 (356)
T 1pl8_A           84 HLKPGDRVAIEPGA-PRENDEFCKMGRYNLSPSIFFCAT------PPDDGNLCRFYKHNAAFCYKLPDNVTFEEGALI-E  155 (356)
T ss_dssp             SCCTTCEEEECSEE-CSSCCHHHHTTCGGGCTTCEETTB------TTBCCSCBSEEEEEGGGEEECCTTSCHHHHHHH-H
T ss_pred             CCCCCCEEEEeccC-CCCCChHHHCcCcccCCCccccCc------CCCCCccccEEEeehHHEEECcCCCCHHHHHhh-c
Confidence            99999999876654 599999999999999997654321      124799999999999999999999999998865 5


Q ss_pred             hhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCcEEEcCC---ChhHHH
Q 018382          164 AGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGADQYLVSS---DATRMQ  239 (357)
Q Consensus       164 ~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~~vv~~~---~~~~~~  239 (357)
                      ++.|||+++..+ .+++|++|||+|+|++|++++|+|+..|+ +|+++++++++.+.+++ +|++++++++   +.+..+
T Consensus       156 ~~~ta~~al~~~-~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~-lGa~~vi~~~~~~~~~~~~  233 (356)
T 1pl8_A          156 PLSVGIHACRRG-GVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKE-IGADLVLQISKESPQEIAR  233 (356)
T ss_dssp             HHHHHHHHHHHH-TCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH-TTCSEEEECSSCCHHHHHH
T ss_pred             hHHHHHHHHHhc-CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-hCCCEEEcCcccccchHHH
Confidence            788999999554 45999999999999999999999999999 99999999999888887 9999999987   344433


Q ss_pred             Hh---h-CCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCcccchHHHhhccceEEEEeecCHHHHHHHHHHHHh
Q 018382          240 EA---A-DSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCRE  315 (357)
Q Consensus       240 ~~---~-~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~  315 (357)
                      ++   + .++|+|||++|....+..++++++++|+++.+|.......++...++.+++++.++..+ .++++++++++++
T Consensus       234 ~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~-~~~~~~~~~l~~~  312 (356)
T 1pl8_A          234 KVEGQLGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSEMTTVPLLHAAIREVDIKGVFRY-CNTWPVAISMLAS  312 (356)
T ss_dssp             HHHHHHTSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCCSCCCCCHHHHHHTTCEEEECCSC-SSCHHHHHHHHHT
T ss_pred             HHHHHhCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEEecCCCCCccCHHHHHhcceEEEEeccc-HHHHHHHHHHHHc
Confidence            33   3 48999999999865688999999999999999875544556777788899999998875 4679999999999


Q ss_pred             cCCC--ccE-EEeecccHHHHHHHHHcCCccEEEEEecCCCcCCC
Q 018382          316 KGVT--SMI-EVIKMDYVNKAFERLEKNDVRYRFVVDVAGSKLDP  357 (357)
Q Consensus       316 ~~l~--~~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~~~~~~~~  357 (357)
                      ++++  +.+ ++|+++++++||+.++++ ..||+++++++++.+|
T Consensus       313 g~i~~~~~i~~~~~l~~~~~A~~~~~~~-~~gKvvi~~~~~~~~~  356 (356)
T 1pl8_A          313 KSVNVKPLVTHRFPLEKALEAFETFKKG-LGLKIMLKCDPSDQNP  356 (356)
T ss_dssp             TSCCCGGGEEEEEEGGGHHHHHHHHHTT-CCSEEEEECCTTCCCC
T ss_pred             CCCChHHheEEEecHHHHHHHHHHHhCC-CceEEEEeCCCCCCCc
Confidence            9875  567 899999999999999988 7899999998877665

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=100.00  E-value=2.6e-56  Score=412.18  Aligned_cols=331  Identities=21%  Similarity=0.288  Sum_probs=290.2

Q ss_pred             eeeehccCCCC--CcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCC-CCCCCccCccccEEEEEeCCCCCCCC
Q 018382           10 TIGWAAKDPSG--ILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGM-SNYPMVPGHEVVGEVKEVGSEVSNFK   86 (357)
Q Consensus        10 ~~~~~~~~~~~--~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~-~~~p~~lG~e~~G~V~~vG~~v~~~~   86 (357)
                      |+++++.+.+.  .+++++++.|+|+++||||||+++++|++|++++.|.++. ..+|.++|||++|+|+++|+++++|+
T Consensus         1 Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~   80 (343)
T 2eih_A            1 MRAVVMRARGGPEVLEVADLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVASPKLPLPHVLGADGSGVVDAVGPGVEGFA   80 (343)
T ss_dssp             CEEEEECSSSSGGGEEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSSTTCCSSEECCSEEEEEEEEECSSCCSCC
T ss_pred             CeEEEEecCCCCceEEEEecCCCCCCCCEEEEEEEEEEeCHHHHHHhcCCCCCCCCCCcccccceEEEEEEECCCCCCCC
Confidence            45666553333  3788999999999999999999999999999999997653 46789999999999999999999999


Q ss_pred             CCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhh
Q 018382           87 VGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGV  166 (357)
Q Consensus        87 ~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~  166 (357)
                      +||||++.+ ...||.|..|+.|.++.|+.....       |...+|+|+||++++++.++++|+++++++||++++++.
T Consensus        81 vGdrV~~~~-~~~cg~c~~C~~g~~~~C~~~~~~-------G~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~  152 (343)
T 2eih_A           81 PGDEVVINP-GLSCGRCERCLAGEDNLCPRYQIL-------GEHRHGTYAEYVVLPEANLAPKPKNLSFEEAAAIPLTFL  152 (343)
T ss_dssp             TTCEEEECC-EECCSCSHHHHTTCGGGCTTCEET-------TTSSCCSSBSEEEEEGGGEEECCTTSCHHHHHHSHHHHH
T ss_pred             CCCEEEECC-CCCcccchhhccCccccccccccc-------CcCCCccceeEEEeChHHeEECCCCCCHHHHhhchhhHH
Confidence            999998776 557999999999999999976543       333579999999999999999999999999999999999


Q ss_pred             hhhhhhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHH---HHhh
Q 018382          167 TVFSPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRM---QEAA  242 (357)
Q Consensus       167 ta~~~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~---~~~~  242 (357)
                      |||+++.+...++++++|||+|+ |++|++++|+++..|++|+++++++++.+.+++ +|+++++|.++.+..   .++.
T Consensus       153 ta~~al~~~~~~~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~-~ga~~~~d~~~~~~~~~~~~~~  231 (343)
T 2eih_A          153 TAWQMVVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKA-LGADETVNYTHPDWPKEVRRLT  231 (343)
T ss_dssp             HHHHHHTTTSCCCTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-HTCSEEEETTSTTHHHHHHHHT
T ss_pred             HHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh-cCCCEEEcCCcccHHHHHHHHh
Confidence            99999988767799999999998 999999999999999999999999999888877 999999988765443   3333


Q ss_pred             --CCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCC-cccchHHHhhccceEEEEeecCHHHHHHHHHHHHhcCCC
Q 018382          243 --DSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTP-MQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVT  319 (357)
Q Consensus       243 --~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~  319 (357)
                        .++|++||++|.. .+..++++++++|+++.+|..... ..++...++.+++++.|+.....++++++++++.++.++
T Consensus       232 ~~~~~d~vi~~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~g~l~  310 (343)
T 2eih_A          232 GGKGADKVVDHTGAL-YFEGVIKATANGGRIAIAGASSGYEGTLPFAHVFYRQLSILGSTMASKSRLFPILRFVEEGKLK  310 (343)
T ss_dssp             TTTCEEEEEESSCSS-SHHHHHHHEEEEEEEEESSCCCSCCCCCCTTHHHHTTCEEEECCSCCGGGHHHHHHHHHHTSSC
T ss_pred             CCCCceEEEECCCHH-HHHHHHHhhccCCEEEEEecCCCCcCccCHHHHHhCCcEEEEecCccHHHHHHHHHHHHcCCCC
Confidence              2799999999954 899999999999999999876543 235666778899999998877778899999999999999


Q ss_pred             ccE-EEeecccHHHHHHHHHcCCccEEEEEec
Q 018382          320 SMI-EVIKMDYVNKAFERLEKNDVRYRFVVDV  350 (357)
Q Consensus       320 ~~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~  350 (357)
                      +.+ ++|+++++++||+.+++++..||+++++
T Consensus       311 ~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  342 (343)
T 2eih_A          311 PVVGQVLPLEAAAEGHRLLEERRVFGKVVLQV  342 (343)
T ss_dssp             CCEEEEEEGGGHHHHHHHHHTTCSSSEEEEEC
T ss_pred             CceeEEeeHHHHHHHHHHHHcCCCceEEEEec
Confidence            988 9999999999999999988889999986

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=100.00  E-value=1.1e-55  Score=410.81  Aligned_cols=331  Identities=23%  Similarity=0.333  Sum_probs=288.5

Q ss_pred             hhhheeeehccC-CCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCC-CCCCCCccCccccEEEEEeCCCCC
Q 018382            6 TERATIGWAAKD-PSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLG-MSNYPMVPGHEVVGEVKEVGSEVS   83 (357)
Q Consensus         6 ~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~-~~~~p~~lG~e~~G~V~~vG~~v~   83 (357)
                      +|.+|+++++.. +++.++++++|.|+|+++||||||+++++|++|++++.|.++ ...+|.++|||++|+|+++|++++
T Consensus        24 m~~~mkA~~~~~~~~~~l~~~e~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~P~v~GhE~~G~V~~vG~~v~  103 (363)
T 3uog_A           24 MSKWMQEWSTETVAPHDLKLAERPVPEAGEHDIIVRTLAVSLNYRDKLVLETGMGLDLAFPFVPASDMSGVVEAVGKSVT  103 (363)
T ss_dssp             CCSEEEEEEBSCTTTTCCEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHHCTTCCCCSSBCCCCEEEEEEEEECTTCC
T ss_pred             CchhhEEEEEccCCCCCcEEEeeeCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCcCcccceEEEEEEECCCCC
Confidence            466788888764 346899999999999999999999999999999999999876 457899999999999999999999


Q ss_pred             CCCCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccc
Q 018382           84 NFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLC  163 (357)
Q Consensus        84 ~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~  163 (357)
                      +|++||||++.+.       ..|..|. +.|......   ....|...+|+|+||++++++.++++|+++++++||++++
T Consensus       104 ~~~vGDrV~~~~~-------~~c~~g~-~~c~~~~~~---~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~  172 (363)
T 3uog_A          104 RFRPGDRVISTFA-------PGWLDGL-RPGTGRTPA---YETLGGAHPGVLSEYVVLPEGWFVAAPKSLDAAEASTLPC  172 (363)
T ss_dssp             SCCTTCEEEECSS-------TTCCSSS-CCSCSSCCC---CCCTTTTSCCCCBSEEEEEGGGEEECCTTSCHHHHHTTTT
T ss_pred             CCCCCCEEEEecc-------ccccccc-ccccccccc---ccccCcCCCCcceeEEEechHHeEECCCCCCHHHHhhccc
Confidence            9999999987543       2577777 888742211   0112445789999999999999999999999999999999


Q ss_pred             hhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhH---HHH
Q 018382          164 AGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATR---MQE  240 (357)
Q Consensus       164 ~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~---~~~  240 (357)
                      ++.|||+++.+...+++|++|||+|+|++|++++|+|+..|++|+++++++++.+.+++ +|+++++|....+.   +.+
T Consensus       173 ~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~-lGa~~vi~~~~~~~~~~v~~  251 (363)
T 3uog_A          173 AGLTAWFALVEKGHLRAGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSREKLDRAFA-LGADHGINRLEEDWVERVYA  251 (363)
T ss_dssp             HHHHHHHHHTTTTCCCTTCEEEEESSBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-HTCSEEEETTTSCHHHHHHH
T ss_pred             HHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHH-cCCCEEEcCCcccHHHHHHH
Confidence            99999999977777799999999999999999999999999999999999999988877 99999999543443   333


Q ss_pred             hhC--CccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCC-cccchHHHhhccceEEEEeecCHHHHHHHHHHHHhcC
Q 018382          241 AAD--SLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTP-MQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKG  317 (357)
Q Consensus       241 ~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~  317 (357)
                      +++  ++|+||||+|.. .+..++++++++|+++.+|..... ..++...++.+++++.++..+..+++++++++++++.
T Consensus       252 ~~~g~g~D~vid~~g~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~  330 (363)
T 3uog_A          252 LTGDRGADHILEIAGGA-GLGQSLKAVAPDGRISVIGVLEGFEVSGPVGPLLLKSPVVQGISVGHRRALEDLVGAVDRLG  330 (363)
T ss_dssp             HHTTCCEEEEEEETTSS-CHHHHHHHEEEEEEEEEECCCSSCEECCBTTHHHHTCCEEEECCCCCHHHHHHHHHHHHHHT
T ss_pred             HhCCCCceEEEECCChH-HHHHHHHHhhcCCEEEEEecCCCcccCcCHHHHHhCCcEEEEEecCCHHHHHHHHHHHHcCC
Confidence            443  799999999966 899999999999999999987653 4566777888999999999988899999999999999


Q ss_pred             CCccE-EEeecccHHHHHHHHHcCCccEEEEEec
Q 018382          318 VTSMI-EVIKMDYVNKAFERLEKNDVRYRFVVDV  350 (357)
Q Consensus       318 l~~~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~  350 (357)
                      +++.+ ++|+++++++||+.+++++ .||+||++
T Consensus       331 l~~~i~~~~~l~~~~~A~~~~~~~~-~gKvvi~~  363 (363)
T 3uog_A          331 LKPVIDMRYKFTEVPEALAHLDRGP-FGKVVIEF  363 (363)
T ss_dssp             CCCCEEEEEEGGGHHHHHHTGGGCC-SBEEEEEC
T ss_pred             CccceeeEEcHHHHHHHHHHHHcCC-CccEEEeC
Confidence            99988 8999999999999999999 89999975

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=100.00  E-value=8.8e-57  Score=418.56  Aligned_cols=335  Identities=20%  Similarity=0.255  Sum_probs=286.1

Q ss_pred             chhhhheeeehccCCCCCcceeeeecC--------CCCCCcEEEEEeeeccccchHHHHhcCC-C--CCCCCCccCcccc
Q 018382            4 LDTERATIGWAAKDPSGILSPYTYTLR--------NTGAEDVYIKVLYCGICHTDIHQIKNDL-G--MSNYPMVPGHEVV   72 (357)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~p--------~~~~~evlV~v~~~~~~~~D~~~~~g~~-~--~~~~p~~lG~e~~   72 (357)
                      ++++++|+++++. +++.++++++|.|        +|+++||||||+++++|++|++++.+.. +  ...+|.++|||++
T Consensus         3 ~~~~~~mka~~~~-~~~~l~~~~~~~P~~~~~~~~~~~~~eVlVkv~a~gi~~~D~~~~~~~~~~~~~~~~p~v~G~E~~   81 (363)
T 3m6i_A            3 SSASKTNIGVFTN-PQHDLWISEASPSLESVQKGEELKEGEVTVAVRSTGICGSDVHFWKHGCIGPMIVECDHVLGHESA   81 (363)
T ss_dssp             --CCSCCEEEEEC-TTCCEEEEECSSCHHHHHHTCSCCTTEEEEEEEEEECCHHHHHHHHHSBSSSCBCCSCEECCCEEE
T ss_pred             CCCcccceeEEEe-CCCcEEEEEecCCccccccCCCcCCCeEEEEEeEEeecHhhHHHHcCCCCCCccCCCCcccCcceE
Confidence            4678899999986 5788999999999        9999999999999999999999987432 2  2467899999999


Q ss_pred             EEEEEeCCCCCCCCCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCC
Q 018382           73 GEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDG  152 (357)
Q Consensus        73 G~V~~vG~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~  152 (357)
                      |+|+++|+++++|++||||++.+. ..||.|.+|+.|.++.|+...+.+.      ...+|+|+||++++++.++++|+ 
T Consensus        82 G~V~~vG~~v~~~~vGdrV~~~~~-~~cg~C~~c~~g~~~~c~~~~~~g~------~~~~G~~aey~~v~~~~~~~iP~-  153 (363)
T 3m6i_A           82 GEVIAVHPSVKSIKVGDRVAIEPQ-VICNACEPCLTGRYNGCERVDFLST------PPVPGLLRRYVNHPAVWCHKIGN-  153 (363)
T ss_dssp             EEEEEECTTCCSCCTTCEEEECCE-ECCSCSHHHHTTCGGGCTTCEETTS------TTSCCSCBSEEEEEGGGEEECTT-
T ss_pred             EEEEEECCCCCCCCCCCEEEEecc-cCCCCCHHHHCcCcccCCCccccCC------CCCCccceeEEEEehhhEEECCC-
Confidence            999999999999999999987765 4699999999999999998765422      23689999999999999999999 


Q ss_pred             CCccccccccchhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCe-EEEEeCCcHHHHHHHHhcCCcEEEc
Q 018382          153 MALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHH-VTVISSSDKKRVEAMEHLGADQYLV  231 (357)
Q Consensus       153 l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~-V~~~~~~~~~~~~~~~~~g~~~vv~  231 (357)
                      +++++||++ .++.|||+++..+. +++|++|||+|+|++|++++|+|+..|++ |+++++++++.+.+++ + ++++++
T Consensus       154 ~s~~~aa~~-~~~~ta~~~l~~~~-~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~-l-~~~~~~  229 (363)
T 3m6i_A          154 MSYENGAML-EPLSVALAGLQRAG-VRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKE-I-CPEVVT  229 (363)
T ss_dssp             CCHHHHHHH-HHHHHHHHHHHHHT-CCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHH-H-CTTCEE
T ss_pred             CCHHHHHhh-hHHHHHHHHHHHcC-CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-h-chhccc
Confidence            999999977 57889999995554 59999999999999999999999999996 9999999999998888 7 544444


Q ss_pred             CC-----ChhH---HHHhhC--CccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCcccchHHHhhccceEEEEeec
Q 018382          232 SS-----DATR---MQEAAD--SLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIG  301 (357)
Q Consensus       232 ~~-----~~~~---~~~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~  301 (357)
                      +.     ..+.   +.+.++  ++|+|||++|....+..++++++++|+++.+|.......++...++.+++++.+++.+
T Consensus       230 ~~~~~~~~~~~~~~v~~~t~g~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~  309 (363)
T 3m6i_A          230 HKVERLSAEESAKKIVESFGGIEPAVALECTGVESSIAAAIWAVKFGGKVFVIGVGKNEIQIPFMRASVREVDLQFQYRY  309 (363)
T ss_dssp             EECCSCCHHHHHHHHHHHTSSCCCSEEEECSCCHHHHHHHHHHSCTTCEEEECCCCCSCCCCCHHHHHHHTCEEEECCSC
T ss_pred             ccccccchHHHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEEccCCCCccccHHHHHhcCcEEEEccCC
Confidence            32     2333   333333  7999999999875689999999999999999987666667777888999999999876


Q ss_pred             CHHHHHHHHHHHHhcCCC--ccE-EEeecccHHHHHHHHHcC-CccEEEEEecCC
Q 018382          302 SMKETKEMLEFCREKGVT--SMI-EVIKMDYVNKAFERLEKN-DVRYRFVVDVAG  352 (357)
Q Consensus       302 ~~~~~~~~~~~~~~~~l~--~~i-~~~~~~~~~~a~~~~~~~-~~~Gkvvi~~~~  352 (357)
                       .++++++++++++|+++  +.+ ++|+++++++||+.++++ ...+|+++++++
T Consensus       310 -~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~Kvvi~~~~  363 (363)
T 3m6i_A          310 -CNTWPRAIRLVENGLVDLTRLVTHRFPLEDALKAFETASDPKTGAIKVQIQSLE  363 (363)
T ss_dssp             -SSCHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHCGGGCCSEEEEECC-
T ss_pred             -HHHHHHHHHHHHhCCCChHHceeeeeeHHHHHHHHHHHhccCCCeEEEEEecCC
Confidence             67899999999999984  567 999999999999999987 567899998863

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=100.00  E-value=1.6e-56  Score=413.61  Aligned_cols=329  Identities=21%  Similarity=0.273  Sum_probs=284.5

Q ss_pred             eeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCC---CCCCCCccCccccEEEEEeCCCCCCCC
Q 018382           10 TIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLG---MSNYPMVPGHEVVGEVKEVGSEVSNFK   86 (357)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~---~~~~p~~lG~e~~G~V~~vG~~v~~~~   86 (357)
                      |+++++.+.+.+++++++|.|+|+++||||||+++++|++|++++.|.++   ...+|.++|||++|+|+++|+++++|+
T Consensus         1 Mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~   80 (343)
T 2dq4_A            1 MRALAKLAPEEGLTLVDRPVPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRPPLVTGHEFSGVVEAVGPGVRRPQ   80 (343)
T ss_dssp             CEEEEECSSSSSCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHTTCHHHHHHCCSSEECCCEEEEEEEEECTTCCSSC
T ss_pred             CeEEEEeCCCCcEEEEeccCCCCCCCEEEEEEEEEeechhhHHHHcCCCCccccCCCCCcCCccceEEEEEECCCCCcCC
Confidence            45666654333488999999999999999999999999999999998654   346789999999999999999999999


Q ss_pred             CCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhh
Q 018382           87 VGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGV  166 (357)
Q Consensus        87 ~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~  166 (357)
                      +||||++.+.. .||.|..|+.|.++.|++..+.       |...+|+|+||++++++.++++|+++++++||++ ..+.
T Consensus        81 vGdrV~~~~~~-~cg~C~~C~~g~~~~C~~~~~~-------g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~-~~~~  151 (343)
T 2dq4_A           81 VGDHVSLESHI-VCHACPACRTGNYHVCLNTQIL-------GVDRDGGFAEYVVVPAENAWVNPKDLPFEVAAIL-EPFG  151 (343)
T ss_dssp             TTCEEEECCEE-CCSCSHHHHTTCGGGCTTCEEB-------TTTBCCSSBSEEEEEGGGEEEECTTSCHHHHTTH-HHHH
T ss_pred             CCCEEEECCCC-CCCCChhhhCcCcccCCCccee-------cCCCCCcceeEEEEchHHeEECCCCCCHHHHHhh-hHHH
Confidence            99999876555 5999999999999999976543       3346799999999999999999999999999987 5678


Q ss_pred             hhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHH---hh
Q 018382          167 TVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQE---AA  242 (357)
Q Consensus       167 ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~---~~  242 (357)
                      |||+++.+...+ +|++|||+|+|++|++++|+|+..|+ +|+++++++++.+.+++ + +++++++++.+..+.   ++
T Consensus       152 ta~~~l~~~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~-l-a~~v~~~~~~~~~~~~~~~~  228 (343)
T 2dq4_A          152 NAVHTVYAGSGV-SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARP-Y-ADRLVNPLEEDLLEVVRRVT  228 (343)
T ss_dssp             HHHHHHHSTTCC-TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTT-T-CSEEECTTTSCHHHHHHHHH
T ss_pred             HHHHHHHHhCCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-h-HHhccCcCccCHHHHHHHhc
Confidence            999999756667 99999999999999999999999999 99999999998888877 8 999999876544333   32


Q ss_pred             -CCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCcccch-HHHhhccceEEEEeec-CHHHHHHHHHHHHhcCC-
Q 018382          243 -DSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLT-PMVMLGRKAITGSFIG-SMKETKEMLEFCREKGV-  318 (357)
Q Consensus       243 -~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~-~~~~~~~~~i~g~~~~-~~~~~~~~~~~~~~~~l-  318 (357)
                       .++|+|||++|....+..++++++++|+++.+|.......++. ..++.+++++.|++.. ..+++++++++++++++ 
T Consensus       229 ~~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~g~~~  308 (343)
T 2dq4_A          229 GSGVEVLLEFSGNEAAIHQGLMALIPGGEARILGIPSDPIRFDLAGELVMRGITAFGIAGRRLWQTWMQGTALVYSGRVD  308 (343)
T ss_dssp             SSCEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCSSCEEECHHHHTGGGTCEEEECCSCCTTHHHHHHHHHHHHTSSC
T ss_pred             CCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCceeCcHHHHHhCceEEEEeecCCCHHHHHHHHHHHHcCCCC
Confidence             3799999999985478899999999999999988655556676 6778899999998876 67889999999999985 


Q ss_pred             -CccE-EEeecccHHHHHHHHHcCCccEEEEEecC
Q 018382          319 -TSMI-EVIKMDYVNKAFERLEKNDVRYRFVVDVA  351 (357)
Q Consensus       319 -~~~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~~  351 (357)
                       ++.+ ++|+++++++||+.+++++. ||++++++
T Consensus       309 ~~~~i~~~~~l~~~~~A~~~~~~~~~-gKvv~~~~  342 (343)
T 2dq4_A          309 LSPLLTHRLPLSRYREAFGLLASGQA-VKVILDPK  342 (343)
T ss_dssp             CGGGEEEEEEGGGHHHHHHHHHHSSC-SEEEEETT
T ss_pred             hHHheeEEecHHHHHHHHHHHhcCCc-eEEEEeeC
Confidence             5677 89999999999999998887 99999875

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=4.5e-56  Score=415.77  Aligned_cols=340  Identities=20%  Similarity=0.327  Sum_probs=290.9

Q ss_pred             hhheeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCC---
Q 018382            7 ERATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVS---   83 (357)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~---   83 (357)
                      ..+|+++++.+.+..++++++|.|+|+++||||||.++++|++|++++.|.++...+|.++|||++|+|+++| +|+   
T Consensus        15 ~~~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~P~v~GhE~~G~V~~vG-~V~~~~   93 (380)
T 1vj0_A           15 GLKAHAMVLEKFNQPLVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPRVPLPIILGHEGAGRVVEVN-GEKRDL   93 (380)
T ss_dssp             CEEEEEEEBCSTTSCCEEEEEEECCCCTTCEEEEEEEEEECHHHHHHHTTCCTTCCSSBCCCCEEEEEEEEES-SCCBCT
T ss_pred             hhheEEEEEecCCCCeEEEEccCCCCCCCEEEEEEeEEeecccchHHhcCCCCCCCCCcccCcCcEEEEEEeC-Cccccc
Confidence            4578888876433489999999999999999999999999999999999976645689999999999999999 999   


Q ss_pred             ---CCCCCCEEEEccccCCCCCCcccc-cCcccccccccccCccc-cCCCCCCCCccceEEEe-eCcceEECCCCCCcc-
Q 018382           84 ---NFKVGDKVGVGVLVGCCRNCRPCE-ADVEQYCNKKIWSYNDV-YTDGKPTQGGFAESMVV-DQKFVVKIPDGMALE-  156 (357)
Q Consensus        84 ---~~~~Gd~V~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~G~~~~~~~v-~~~~~~~lP~~l~~~-  156 (357)
                         +|++||||++.+.. .||.|..|+ .|.++.|++..+.+... ........|+|+||+++ +++.++++|++++++ 
T Consensus        94 ~~~~~~vGdrV~~~~~~-~cg~C~~C~~~g~~~~C~~~~~~g~~~~~~~~~~~~G~~aey~~v~~~~~~~~iP~~l~~~~  172 (380)
T 1vj0_A           94 NGELLKPGDLIVWNRGI-TCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPHLRGCYSSHIVLDPETDVLKVSEKDDLDV  172 (380)
T ss_dssp             TSCBCCTTCEEEECSEE-CCSSSHHHHTSCCGGGCTTCEETTTTCCSSSTTCCCSSSBSEEEECTTCCEEEECTTSCHHH
T ss_pred             cCCCCCCCCEEEEcccC-CCCCCHHHhcCCCcccCCCcceeccccccCCCCCCCccccceEEEcccceEEECCCCCChHH
Confidence               99999999877655 599999999 99999999764321100 00001347999999999 999999999999999 


Q ss_pred             ccccccchhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCcEEEcCC--
Q 018382          157 QAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGADQYLVSS--  233 (357)
Q Consensus       157 ~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~~vv~~~--  233 (357)
                      +||++. ++.|||+++..+..+++|++|||+|+|++|++++|+|+..|+ +|+++++++++.+.+++ +|++++++++  
T Consensus       173 ~Aa~~~-~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~-lGa~~vi~~~~~  250 (380)
T 1vj0_A          173 LAMAMC-SGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEE-IGADLTLNRRET  250 (380)
T ss_dssp             HHHHTT-HHHHHHHHHHTCSSCCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHH-TTCSEEEETTTS
T ss_pred             hHhhhc-HHHHHHHHHHhcCCCCCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHH-cCCcEEEecccc
Confidence            666555 999999999765416999999999999999999999999995 99999999999998887 9999999987  


Q ss_pred             -ChhHHH---HhhC--CccEEEEcCCCCCChHHHHhccccCCeEEEEccCC-C-CcccchHH-HhhccceEEEEeecCHH
Q 018382          234 -DATRMQ---EAAD--SLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVIN-T-PMQFLTPM-VMLGRKAITGSFIGSMK  304 (357)
Q Consensus       234 -~~~~~~---~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~-~~~~~~~~-~~~~~~~i~g~~~~~~~  304 (357)
                       +.+..+   +++.  ++|+|||++|....+..++++++++|+++.+|... + ...++... ++.+++++.|++.+..+
T Consensus       251 ~~~~~~~~v~~~~~g~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~  330 (380)
T 1vj0_A          251 SVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGFYSVAGVAVPQDPVPFKVYEWLVLKNATFKGIWVSDTS  330 (380)
T ss_dssp             CHHHHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCSCCCCEEECHHHHTTTTTCEEEECCCCCHH
T ss_pred             CcchHHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCCCeeEchHHHHHhCCeEEEEeecCCHH
Confidence             544333   3333  79999999998657899999999999999999876 4 45567667 78899999999988888


Q ss_pred             HHHHHHHHHHh--cCCCccE-EEeecccHHHHHHHHHcCCccEEEEEecC
Q 018382          305 ETKEMLEFCRE--KGVTSMI-EVIKMDYVNKAFERLEKNDVRYRFVVDVA  351 (357)
Q Consensus       305 ~~~~~~~~~~~--~~l~~~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~~  351 (357)
                      +++++++++++  +++++.+ ++|+++++++||+.+++++.. |+|++++
T Consensus       331 ~~~~~~~l~~~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~-Kvvl~~~  379 (380)
T 1vj0_A          331 HFVKTVSITSRNYQLLSKLITHRLPLKEANKALELMESREAL-KVILYPE  379 (380)
T ss_dssp             HHHHHHHHHHTCHHHHGGGCCEEEEGGGHHHHHHHHHHTSCS-CEEEECC
T ss_pred             HHHHHHHHHHhhcCCeeeEEEEEEeHHHHHHHHHHHhcCCCc-eEEEEeC
Confidence            99999999999  9998888 999999999999999998888 9999875

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=6.6e-56  Score=410.90  Aligned_cols=333  Identities=23%  Similarity=0.332  Sum_probs=283.9

Q ss_pred             hheeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhc-CCC--CCCCCCccCccccEEEEEeCCCCCC
Q 018382            8 RATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKN-DLG--MSNYPMVPGHEVVGEVKEVGSEVSN   84 (357)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g-~~~--~~~~p~~lG~e~~G~V~~vG~~v~~   84 (357)
                      ++|+++++.+ ++.++++++|.|+|+++||||||+++++|++|++++.+ ..+  ...+|.++|||++|+|+++|+++++
T Consensus         3 ~~mka~~~~~-~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~~~~~~~p~v~G~E~~G~V~~vG~~v~~   81 (352)
T 1e3j_A            3 SDNLSAVLYK-QNDLRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNVKH   81 (352)
T ss_dssp             -CCEEEEEEE-TTEEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSBSSSCBCCSCEECCCEEEEEEEEECTTCCS
T ss_pred             ccCEEEEEEc-CCcEEEEEecCCCCCCCeEEEEEEEEEEChhhHHHHcCCCCccccCCCCccccccceEEEEEeCCCCCC
Confidence            4578888764 66899999999999999999999999999999999884 332  1356899999999999999999999


Q ss_pred             CCCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccch
Q 018382           85 FKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCA  164 (357)
Q Consensus        85 ~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~  164 (357)
                      |++||||++.+.. .||.|.+|+.|.++.|++..+.+.      ...+|+|+||++++++.++++|+++++++||++ .+
T Consensus        82 ~~vGdrV~~~~~~-~cg~C~~C~~g~~~~C~~~~~~g~------~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~-~~  153 (352)
T 1e3j_A           82 LKKGDRVAVEPGV-PCRRCQFCKEGKYNLCPDLTFCAT------PPDDGNLARYYVHAADFCHKLPDNVSLEEGALL-EP  153 (352)
T ss_dssp             CCTTCEEEECCEE-CCSSSHHHHTTCGGGCTTCEETTB------TTBCCSCBSEEEEEGGGEEECCTTSCHHHHHTH-HH
T ss_pred             CCCCCEEEEcCcC-CCCCChhhhCcCcccCCCCcccCc------CCCCccceeEEEeChHHeEECcCCCCHHHHHhh-ch
Confidence            9999999876544 699999999999999997654321      124799999999999999999999999999865 57


Q ss_pred             hhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCC-hhH---HHH
Q 018382          165 GVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSD-ATR---MQE  240 (357)
Q Consensus       165 ~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~-~~~---~~~  240 (357)
                      +.|||+++..+ .+++|++|||+|+|++|++++|+|+..|++|+++++++++.+.+++ +|+++++++++ .+.   +.+
T Consensus       154 ~~ta~~al~~~-~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~-lGa~~~~~~~~~~~~~~~i~~  231 (352)
T 1e3j_A          154 LSVGVHACRRA-GVQLGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKN-CGADVTLVVDPAKEEESSIIE  231 (352)
T ss_dssp             HHHHHHHHHHH-TCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-TTCSEEEECCTTTSCHHHHHH
T ss_pred             HHHHHHHHHhc-CCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH-hCCCEEEcCcccccHHHHHHH
Confidence            88999999554 4599999999999999999999999999999999999999888887 99999998874 332   333


Q ss_pred             hh-----CCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCcccchHHHhhccceEEEEeecCHHHHHHHHHHHHh
Q 018382          241 AA-----DSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCRE  315 (357)
Q Consensus       241 ~~-----~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~  315 (357)
                      ..     .++|+|||++|....++.++++++++|+++.+|.......++...++.+++++.+++.+ .++++++++++.+
T Consensus       232 ~~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~-~~~~~~~~~l~~~  310 (352)
T 1e3j_A          232 RIRSAIGDLPNVTIDCSGNEKCITIGINITRTGGTLMLVGMGSQMVTVPLVNACAREIDIKSVFRY-CNDYPIALEMVAS  310 (352)
T ss_dssp             HHHHHSSSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCSSCCCCCHHHHHTTTCEEEECCSC-SSCHHHHHHHHHT
T ss_pred             HhccccCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCccccHHHHHhcCcEEEEeccc-hHHHHHHHHHHHc
Confidence            32     47999999999865688999999999999999875544556667788899999998775 4679999999999


Q ss_pred             cCCC--ccE-EEeecccHHHHHHHHHcCC-ccEEEEEecCC
Q 018382          316 KGVT--SMI-EVIKMDYVNKAFERLEKND-VRYRFVVDVAG  352 (357)
Q Consensus       316 ~~l~--~~i-~~~~~~~~~~a~~~~~~~~-~~Gkvvi~~~~  352 (357)
                      ++++  +.+ ++|+++++++||+.+++++ ..||+|++++.
T Consensus       311 g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~Kvvi~~~~  351 (352)
T 1e3j_A          311 GRCNVKQLVTHSFKLEQTVDAFEAARKKADNTIKVMISCRQ  351 (352)
T ss_dssp             TSCCCGGGEEEEEEGGGHHHHHHHHHHCCTTCSEEEEECCC
T ss_pred             CCCChHHheeEEecHHHHHHHHHHHhcCCCCceEEEEecCC
Confidence            9875  567 8999999999999999988 68999999863

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=100.00  E-value=8.3e-56  Score=409.45  Aligned_cols=329  Identities=26%  Similarity=0.443  Sum_probs=289.3

Q ss_pred             eeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCC--------CCCCCCccCccccEEEEEeCCC
Q 018382           10 TIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLG--------MSNYPMVPGHEVVGEVKEVGSE   81 (357)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~--------~~~~p~~lG~e~~G~V~~vG~~   81 (357)
                      |+++++.+.+++++++++|.|+|+++||||||.++++|++|++++.|.++        ...+|.++|||++|+|+++|++
T Consensus         1 Mka~~~~~~g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~   80 (347)
T 1jvb_A            1 MRAVRLVEIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDE   80 (347)
T ss_dssp             CEEEEECSTTSCCEEEECCCCCCCTTCEEEEEEEEEECTHHHHHTTTEETTEETTTTTCCCSCEECCCEEEEEEEEECTT
T ss_pred             CeEEEEecCCCCeEEEEeeCCCCCCCeEEEEEEEEEecHHHHHHhcCCCcccccccccCCCCCccccccceEEEEEECCC
Confidence            46677664445799999999999999999999999999999999988655        3467899999999999999999


Q ss_pred             CCCCCCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeC-cceEECCCCCCcccccc
Q 018382           82 VSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQ-KFVVKIPDGMALEQAAP  160 (357)
Q Consensus        82 v~~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~-~~~~~lP~~l~~~~aa~  160 (357)
                      +++|++||||+.. ....||.|..|+.|.++.|++....       |...+|+|+||+++++ +.++++ +++++++||+
T Consensus        81 v~~~~vGdrV~~~-~~~~Cg~C~~C~~g~~~~C~~~~~~-------G~~~~G~~aey~~v~~~~~~~~i-~~~~~~~aa~  151 (347)
T 1jvb_A           81 VVGYSKGDLVAVN-PWQGEGNCYYCRIGEEHLCDSPRWL-------GINFDGAYAEYVIVPHYKYMYKL-RRLNAVEAAP  151 (347)
T ss_dssp             CCSCCTTCEEEEC-CEECCSSSHHHHTTCGGGCSSCEEB-------TTTBCCSSBSEEEESCGGGEEEC-SSSCHHHHGG
T ss_pred             CCCCCCCCEEEeC-CCCCCCCChhhhCcCcccCcccccc-------cccCCCcceeEEEecCccceEEe-CCCCHHHccc
Confidence            9999999999554 4457999999999999999976533       3346799999999999 999999 9999999999


Q ss_pred             ccchhhhhhhhhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHc-CCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhH-
Q 018382          161 LLCAGVTVFSPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAM-GHHVTVISSSDKKRVEAMEHLGADQYLVSSDATR-  237 (357)
Q Consensus       161 ~~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~-g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~-  237 (357)
                      +++++.|||+++.. ..++++++|||+|+ |++|++++|+++.. |++|+++++++++.+.+++ +|+++++|.++.+. 
T Consensus       152 l~~~~~ta~~~l~~-~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~  229 (347)
T 1jvb_A          152 LTCSGITTYRAVRK-ASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKR-AGADYVINASMQDPL  229 (347)
T ss_dssp             GGTHHHHHHHHHHH-TTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHH-HTCSEEEETTTSCHH
T ss_pred             chhhHHHHHHHHHh-cCCCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH-hCCCEEecCCCccHH
Confidence            99999999999977 45599999999998 59999999999999 9999999999999888877 99999998877554 


Q ss_pred             --HHHhh--CCccEEEEcCCCCCChHHHHhccccCCeEEEEccCC-CCcccchHHHhhccceEEEEeecCHHHHHHHHHH
Q 018382          238 --MQEAA--DSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVIN-TPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEF  312 (357)
Q Consensus       238 --~~~~~--~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~  312 (357)
                        +.++.  +++|++||++|....++.++++++++|+++.+|... .. .++...++.+++++.++.....+++++++++
T Consensus       230 ~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~-~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l  308 (347)
T 1jvb_A          230 AEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGADL-HYHAPLITLSEIQFVGSLVGNQSDFLGIMRL  308 (347)
T ss_dssp             HHHHHHTTTSCEEEEEESCCCHHHHTTGGGGEEEEEEEEECCSSCCCC-CCCHHHHHHHTCEEEECCSCCHHHHHHHHHH
T ss_pred             HHHHHHhcCCCceEEEECCCCHHHHHHHHHHHhcCCEEEEECCCCCCC-CCCHHHHHhCceEEEEEeccCHHHHHHHHHH
Confidence              44444  479999999998657888999999999999998765 44 6666677889999999998888899999999


Q ss_pred             HHhcCCCccE-EEeecccHHHHHHHHHcCCccEEEEEec
Q 018382          313 CREKGVTSMI-EVIKMDYVNKAFERLEKNDVRYRFVVDV  350 (357)
Q Consensus       313 ~~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~  350 (357)
                      ++++++++.+ ++|+++++++||+.+++++..||+|+++
T Consensus       309 ~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  347 (347)
T 1jvb_A          309 AEAGKVKPMITKTMKLEEANEAIDNLENFKAIGRQVLIP  347 (347)
T ss_dssp             HHTTSSCCCCEEEEEGGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             HHcCCCCceEEEEEcHHHHHHHHHHHHCCCCcceEEecC
Confidence            9999999988 9999999999999999999889999874

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=100.00  E-value=3.1e-55  Score=405.74  Aligned_cols=328  Identities=22%  Similarity=0.324  Sum_probs=280.1

Q ss_pred             eeeehccCCCCCcceeeeecCC-CCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCCC
Q 018382           10 TIGWAAKDPSGILSPYTYTLRN-TGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVG   88 (357)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~p~-~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~G   88 (357)
                      |+|+++. +++.++++|+|+|+ +++|||||||+++++|++|++.+.|..+ ..+|.++|||++|+|+++|++|++|++|
T Consensus         1 MkAvv~~-~~g~l~v~e~p~P~~~~~~eVlVkv~a~gi~~sD~~~~~g~~~-~~~P~i~G~E~~G~V~~vG~~V~~~~~G   78 (346)
T 4a2c_A            1 MKSVVND-TDGIVRVAESVIPEIKHQDEVRVKIASSGLCGSDLPRIFKNGA-HYYPITLGHEFSGYIDAVGSGVDDLHPG   78 (346)
T ss_dssp             CEEEEEC-SSSCEEEEECCCCCCCSTTEEEEEEEEEECCTTHHHHHHSSCS-SSSSBCCCCEEEEEEEEECTTCCSCCTT
T ss_pred             CCEEEEe-cCCCEEEEEEeCCCCCCcCEEEEEEEEEEECHHHHHHHcCCCC-CCCCccccEEEEEEEEEECCCcccccCC
Confidence            6777765 57789999999998 5799999999999999999999988765 4689999999999999999999999999


Q ss_pred             CEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhhh
Q 018382           89 DKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTV  168 (357)
Q Consensus        89 d~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta  168 (357)
                      |||++.+. ..|+.|..|..|.++.|.+..+.       |...+|+|+||++++++.++++|+++++++||+++ ...++
T Consensus        79 drV~~~~~-~~~g~c~~c~~g~~~~c~~~~~~-------g~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~-~~~~~  149 (346)
T 4a2c_A           79 DAVACVPL-LPCFTCPECLKGFYSQCAKYDFI-------GSRRDGGFAEYIVVKRKNVFALPTDMPIEDGAFIE-PITVG  149 (346)
T ss_dssp             CEEEECCE-ECCSCSHHHHTTCGGGCSSCEEB-------TTTBCCSSBSEEEEEGGGEEECCTTSCGGGGGGHH-HHHHH
T ss_pred             CeEEeeec-cCCCCcccccCCccccCCCcccc-------cCCCCcccccccccchheEEECCCCCCHHHHHhch-HHHHH
Confidence            99976654 46999999999999999987655       44578999999999999999999999999999775 34455


Q ss_pred             hhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCe-EEEEeCCcHHHHHHHHhcCCcEEEcCCChhH---HHHhhC-
Q 018382          169 FSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHH-VTVISSSDKKRVEAMEHLGADQYLVSSDATR---MQEAAD-  243 (357)
Q Consensus       169 ~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~-V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~---~~~~~~-  243 (357)
                      +.++.. ..+++|++|||+|+|++|++++|+|+..|++ ++++++++++.+.+++ +|+++++|+++.+.   .+.+++ 
T Consensus       150 ~~~~~~-~~~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~-lGa~~~i~~~~~~~~~~~~~~~~~  227 (346)
T 4a2c_A          150 LHAFHL-AQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKS-FGAMQTFNSSEMSAPQMQSVLREL  227 (346)
T ss_dssp             HHHHHH-TTCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH-TTCSEEEETTTSCHHHHHHHHGGG
T ss_pred             HHHHHH-hccCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHH-cCCeEEEeCCCCCHHHHHHhhccc
Confidence            555544 4459999999999999999999999999995 5677788888888877 99999999987543   334443 


Q ss_pred             -CccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCcc---cchHHHhhccceEEEEeec-----CHHHHHHHHHHHH
Q 018382          244 -SLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQ---FLTPMVMLGRKAITGSFIG-----SMKETKEMLEFCR  314 (357)
Q Consensus       244 -~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~---~~~~~~~~~~~~i~g~~~~-----~~~~~~~~~~~~~  314 (357)
                       ++|+|||++|....++.++++++++|+++.+|.......   .+...++.+++++.|++..     ..+++++++++++
T Consensus       228 ~g~d~v~d~~G~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~k~~~i~G~~~~~~~~~~~~~~~~~~~l~~  307 (346)
T 4a2c_A          228 RFNQLILETAGVPQTVELAVEIAGPHAQLALVGTLHQDLHLTSATFGKILRKELTVIGSWMNYSSPWPGQEWETASRLLT  307 (346)
T ss_dssp             CSSEEEEECSCSHHHHHHHHHHCCTTCEEEECCCCSSCEEECHHHHHHHHHHTCEEEECCTTCCSSTTCHHHHHHHHHHH
T ss_pred             CCcccccccccccchhhhhhheecCCeEEEEEeccCCCccccccCHHHHhhceeEEEEEeccccCcchHHHHHHHHHHHH
Confidence             799999999987678999999999999999998766543   3445678899999998753     2467999999999


Q ss_pred             hcCCC--ccE-EEeecccHHHHHHHHHcCCccEEEEEec
Q 018382          315 EKGVT--SMI-EVIKMDYVNKAFERLEKNDVRYRFVVDV  350 (357)
Q Consensus       315 ~~~l~--~~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~  350 (357)
                      +++++  +.| ++|+|+++++||+.+++++..||+||.+
T Consensus       308 ~g~l~~~~lI~~~~~l~~~~~A~~~l~~~~~~GKvVl~P  346 (346)
T 4a2c_A          308 ERKLSLEPLIAHRGSFESFAQAVRDIARNAMPGKVLLIP  346 (346)
T ss_dssp             TTCSCCGGGEEEEECHHHHHHHHHHHTTSCCCSEEEECC
T ss_pred             cCCCCCCccEeEEEeHHHHHHHHHHHHcCCCceEEEEEC
Confidence            99886  457 8999999999999999999999999864

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=100.00  E-value=1e-54  Score=402.92  Aligned_cols=333  Identities=23%  Similarity=0.297  Sum_probs=281.3

Q ss_pred             eeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHH-HHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCCC
Q 018382           10 TIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIH-QIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVG   88 (357)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~-~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~G   88 (357)
                      |+++++. +++.++++++|.|+|+++||||||+++++|++|++ ++.|..+ ..+|.++|||++|+|+++|+++++|++|
T Consensus         1 MkA~~~~-~~~~~~~~e~~~P~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~-~~~p~v~G~E~~G~V~~vG~~v~~~~vG   78 (352)
T 3fpc_A            1 MKGFAML-SIGKVGWIEKEKPAPGPFDAIVRPLAVAPCTSDIHTVFEGAIG-ERHNMILGHEAVGEVVEVGSEVKDFKPG   78 (352)
T ss_dssp             CEEEEEE-ETTEEEEEECCCCCCCTTCEEEEEEEEECCHHHHHHHHSCTTC-CCSSEECCCEEEEEEEEECTTCCSCCTT
T ss_pred             CeEEEEc-cCCCceEEeCCCCCCCCCeEEEEeCEEeEcccchHHHhCCCCC-CCCCcccCCcceEEEEEECCCCCcCCCC
Confidence            5677766 45678899999999999999999999999999999 5577765 3679999999999999999999999999


Q ss_pred             CEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCc--ceEECCCCCCccccccccchhh
Q 018382           89 DKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQK--FVVKIPDGMALEQAAPLLCAGV  166 (357)
Q Consensus        89 d~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~--~~~~lP~~l~~~~aa~~~~~~~  166 (357)
                      |||++.+.. .|+.|..|..|.++.|......    ...+...+|+|+||+++++.  .++++|+++++++||+++.++.
T Consensus        79 drV~~~~~~-~c~~c~~c~~g~~~~~~~~~~~----~~~~~~~~G~~aey~~v~~~~~~~~~iP~~~~~~~aa~~~~~~~  153 (352)
T 3fpc_A           79 DRVVVPAIT-PDWRTSEVQRGYHQHSGGMLAG----WKFSNVKDGVFGEFFHVNDADMNLAHLPKEIPLEAAVMIPDMMT  153 (352)
T ss_dssp             CEEEECSBC-CCSSSHHHHTTCGGGTTSTTTT----BCBTTTBCCSSBSCEEESSHHHHCEECCTTSCHHHHTTTTTHHH
T ss_pred             CEEEEcccc-CCCCchhhcCCCcCCccccccc----cccccCCCCcccceEEeccccCeEEECCCCCCHHHHhhccchhH
Confidence            999776544 6999999999999998754211    11234578999999999976  9999999999999999999999


Q ss_pred             hhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHH---hh
Q 018382          167 TVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQE---AA  242 (357)
Q Consensus       167 ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~---~~  242 (357)
                      |||+++..+ .+++|++|||+|+|++|++++|+|+..|+ +|+++++++++.+.+++ +|+++++|+++.+..++   ++
T Consensus       154 ta~~al~~~-~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~-lGa~~vi~~~~~~~~~~v~~~t  231 (352)
T 3fpc_A          154 TGFHGAELA-NIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALE-YGATDIINYKNGDIVEQILKAT  231 (352)
T ss_dssp             HHHHHHHHT-TCCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHH-HTCCEEECGGGSCHHHHHHHHT
T ss_pred             HHHHHHHhc-CCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHH-hCCceEEcCCCcCHHHHHHHHc
Confidence            999999554 45999999999999999999999999999 89999999988888888 99999999877554443   33


Q ss_pred             C--CccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCcccchH----HHhhccceEEEEeec-CHHHHHHHHHHHHh
Q 018382          243 D--SLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTP----MVMLGRKAITGSFIG-SMKETKEMLEFCRE  315 (357)
Q Consensus       243 ~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~----~~~~~~~~i~g~~~~-~~~~~~~~~~~~~~  315 (357)
                      .  ++|+|||++|....+..++++++++|+++.+|.......++..    ....++.++.++... ..++++++++++++
T Consensus       232 ~g~g~D~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~  311 (352)
T 3fpc_A          232 DGKGVDKVVIAGGDVHTFAQAVKMIKPGSDIGNVNYLGEGDNIDIPRSEWGVGMGHKHIHGGLCPGGRLRMERLIDLVFY  311 (352)
T ss_dssp             TTCCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCCSCSEEEEETTTTGGGTBCEEEEEBCCCCHHHHHHHHHHHHHT
T ss_pred             CCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEecccCCCCceecchhHhhhhccccEEEEeeccCchhHHHHHHHHHHc
Confidence            3  7999999999965899999999999999999876543332222    123578889988764 35789999999999


Q ss_pred             cCCCc--cE-EEee-cccHHHHHHHHHcCCcc-EEEEEecC
Q 018382          316 KGVTS--MI-EVIK-MDYVNKAFERLEKNDVR-YRFVVDVA  351 (357)
Q Consensus       316 ~~l~~--~i-~~~~-~~~~~~a~~~~~~~~~~-Gkvvi~~~  351 (357)
                      +++++  .+ ++|+ ++++++||+.+++++.. +|+|++++
T Consensus       312 g~i~~~~~i~~~~~gl~~~~~A~~~~~~~~~~~~Kvvi~~~  352 (352)
T 3fpc_A          312 KRVDPSKLVTHVFRGFDNIEKAFMLMKDKPKDLIKPVVILA  352 (352)
T ss_dssp             TSCCGGGGEEEEEESTTHHHHHHHHHHSCCTTCSEEEEECC
T ss_pred             CCCChhHhheeeCCCHHHHHHHHHHHHhCCCCcEEEEEEeC
Confidence            99987  47 8999 99999999999987654 89999874

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=100.00  E-value=3.4e-54  Score=412.28  Aligned_cols=341  Identities=16%  Similarity=0.188  Sum_probs=294.3

Q ss_pred             CchhhhheeeehccCC---------------CCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcC----------
Q 018382            3 SLDTERATIGWAAKDP---------------SGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKND----------   57 (357)
Q Consensus         3 ~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~----------   57 (357)
                      .+++|.+|+++++...               ++.++++++|.|+|+++||||||.+++||++|++...+.          
T Consensus        24 ~~~iP~tmkA~v~~~~~~~~~~~~~~~~~~~~~~l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~~~~~~~~~~~~  103 (456)
T 3krt_A           24 ALPLPESYRAITVHKDETEMFAGLETRDKDPRKSIHLDDVPVPELGPGEALVAVMASSVNYNSVHTSIFEPLSTFGFLER  103 (456)
T ss_dssp             HSCCCSCEEEEEEEGGGTTTTTTCCGGGCCHHHHCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTCSSCSHHHHHH
T ss_pred             cCCCCcceEEEEEeccccccccccccccCCCCCCcEEEEccCCCCCCCeEEEEEEEEEecchhhhhhhcCcccchhhhhh
Confidence            3468889999998753               257889999999999999999999999999999765321          


Q ss_pred             ---CC----CCCCC-CccCccccEEEEEeCCCCCCCCCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCC
Q 018382           58 ---LG----MSNYP-MVPGHEVVGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGK  129 (357)
Q Consensus        58 ---~~----~~~~p-~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (357)
                         ..    ...+| .++|||++|+|+++|+++++|++||||++.+.  .|..|..|..+.++.|+...+.+.      .
T Consensus       104 ~g~~~~~~~~~~~P~~v~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~--~c~~~~~~~~~~~~~c~~~~~~G~------~  175 (456)
T 3krt_A          104 YGRVSDLAKRHDLPYHVIGSDLAGVVLRTGPGVNAWQAGDEVVAHCL--SVELESSDGHNDTMLDPEQRIWGF------E  175 (456)
T ss_dssp             HHTSCHHHHTTCCSEEECCSCCEEEEEEECTTCCSCCTTCEEEECCE--ECCCCSGGGTTSGGGCTTCEETTT------T
T ss_pred             ccccccccccCCCCcccccceeEEEEEEECCCCCCCCCCCEEEEeCC--cccccccccccccccCcccccccc------C
Confidence               11    22456 68999999999999999999999999987543  588899999999999987764422      1


Q ss_pred             CCCCccceEEEeeCcceEECCCCCCccccccccchhhhhhhhhhcc--CCCCCCCeEEEEec-ChHHHHHHHHHHHcCCe
Q 018382          130 PTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHF--GLKQSGLRGGILGL-GGVGHMGVLIAKAMGHH  206 (357)
Q Consensus       130 ~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~--~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~  206 (357)
                      ..+|+|+||++++++.++++|+++++++||++++++.|||+++...  ..+++|++|||+|+ |++|++++|+|+..|++
T Consensus       176 ~~~G~~aey~~v~~~~~~~~P~~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~g~~VlV~GasG~vG~~avqlak~~Ga~  255 (456)
T 3krt_A          176 TNFGGLAEIALVKSNQLMPKPDHLSWEEAAAPGLVNSTAYRQLVSRNGAGMKQGDNVLIWGASGGLGSYATQFALAGGAN  255 (456)
T ss_dssp             SSSCSSBSEEEEEGGGEEECCTTSCHHHHHSSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTCE
T ss_pred             CCCCcccceEEechHHeeECCCCCCHHHHHHhhhHHHHHHHHHHhhcccCCCCCCEEEEECCCCHHHHHHHHHHHHcCCe
Confidence            2469999999999999999999999999999999999999998764  56699999999998 99999999999999999


Q ss_pred             EEEEeCCcHHHHHHHHhcCCcEEEcCCCh--------------------hHHHHhhC--CccEEEEcCCCCCChHHHHhc
Q 018382          207 VTVISSSDKKRVEAMEHLGADQYLVSSDA--------------------TRMQEAAD--SLDYIIDTVPANHPLEPYLSL  264 (357)
Q Consensus       207 V~~~~~~~~~~~~~~~~~g~~~vv~~~~~--------------------~~~~~~~~--~~d~v~d~~g~~~~~~~~~~~  264 (357)
                      |+++++++++.+.+++ +|+++++|+++.                    +.+.++++  ++|+|||++|.. .+..++++
T Consensus       256 vi~~~~~~~~~~~~~~-lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~~~~i~~~t~g~g~Dvvid~~G~~-~~~~~~~~  333 (456)
T 3krt_A          256 PICVVSSPQKAEICRA-MGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRIRELTGGEDIDIVFEHPGRE-TFGASVFV  333 (456)
T ss_dssp             EEEEESSHHHHHHHHH-HTCCEEEETTTTTCCSEEETTEECHHHHHHHHHHHHHHHTSCCEEEEEECSCHH-HHHHHHHH
T ss_pred             EEEEECCHHHHHHHHh-hCCcEEEecCcCcccccccccccchHHHHHHHHHHHHHhCCCCCcEEEEcCCch-hHHHHHHH
Confidence            9999999999988877 999999988763                    23444443  899999999995 89999999


Q ss_pred             cccCCeEEEEccCCCC-cccchHHHhhccceEEEEeecCHHHHHHHHHHHHhcCCCccE-EEeecccHHHHHHHHHcCCc
Q 018382          265 LKLDGKLILTGVINTP-MQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMI-EVIKMDYVNKAFERLEKNDV  342 (357)
Q Consensus       265 l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~  342 (357)
                      ++++|+++.+|...+. ..++...++.+.+++.|++.+..+++.++++++++|.+++.+ ++|+|+++++||+.+.+++.
T Consensus       334 l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~eA~~~l~~~~~  413 (456)
T 3krt_A          334 TRKGGTITTCASTSGYMHEYDNRYLWMSLKRIIGSHFANYREAWEANRLIAKGRIHPTLSKVYSLEDTGQAAYDVHRNLH  413 (456)
T ss_dssp             EEEEEEEEESCCTTCSEEEEEHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTSSCCCEEEEEEGGGHHHHHHHHHTTCS
T ss_pred             hhCCcEEEEEecCCCcccccCHHHHHhcCeEEEEeccCCHHHHHHHHHHHHcCCcccceeEEEcHHHHHHHHHHHHhCCC
Confidence            9999999999987653 456677788899999999998888899999999999999988 99999999999999999999


Q ss_pred             cEEEEEecCCC
Q 018382          343 RYRFVVDVAGS  353 (357)
Q Consensus       343 ~Gkvvi~~~~~  353 (357)
                      .||++|.+..+
T Consensus       414 ~GKvvv~~~~~  424 (456)
T 3krt_A          414 QGKVGVLCLAP  424 (456)
T ss_dssp             SSEEEEESSCS
T ss_pred             CCcEEEEeCCC
Confidence            99999988554

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=100.00  E-value=5.9e-55  Score=405.16  Aligned_cols=328  Identities=18%  Similarity=0.197  Sum_probs=279.0

Q ss_pred             eeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCC---CCccCccccEEEEEeCCCCCCCC
Q 018382           10 TIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNY---PMVPGHEVVGEVKEVGSEVSNFK   86 (357)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~---p~~lG~e~~G~V~~vG~~v~~~~   86 (357)
                      |+++++.+..++++++++|.|+|+++||||||+++++|++|++++.|.++...+   |.++|||++| |+++|++ ++|+
T Consensus         1 MkA~~~~~~~~~l~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G-V~~vG~~-~~~~   78 (357)
T 2b5w_A            1 MKAIAVKRGEDRPVVIEKPRPEPESGEALVRTLRVGVCGTDHEVIAGGHGGFPEGEDHLVLGHEAVG-VVVDPND-TELE   78 (357)
T ss_dssp             CEEEEEETTCSSCEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHSCSTTSCTTCSEEECCSEEEE-EEEECTT-SSCC
T ss_pred             CeEEEEeCCCCceEEEECCCCCCCcCEEEEEEeEEeechhcHHHHcCCCCCCCCCCCCcccCceeEE-EEEECCC-CCCC
Confidence            466776644445999999999999999999999999999999999997664456   8899999999 9999999 9999


Q ss_pred             CCCEEEEccccCC-CCCCcccccCcccccccccccCccccCCCC-CCCCccceEEEeeCcceEECCCCCCccccccccch
Q 018382           87 VGDKVGVGVLVGC-CRNCRPCEADVEQYCNKKIWSYNDVYTDGK-PTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCA  164 (357)
Q Consensus        87 ~Gd~V~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~  164 (357)
                      +||||++.+..++ ||.|.+|+.|.++.|++..+...     |. ..+|+|+||++++++.++++|++++ + +|+++.+
T Consensus        79 vGdrV~~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~-----g~~~~~G~~aey~~v~~~~~~~iP~~~~-~-~aal~~~  151 (357)
T 2b5w_A           79 EGDIVVPTVRRPPASGTNEYFERDQPDMAPDGMYFER-----GIVGAHGYMSEFFTSPEKYLVRIPRSQA-E-LGFLIEP  151 (357)
T ss_dssp             TTCEEEECSEECCTTCCCHHHHTTCGGGCCTTSCEEE-----TTBEECCSCBSEEEEEGGGEEECCGGGS-T-TGGGHHH
T ss_pred             CCCEEEECCcCCCCCCCChHHhCcCcccCCCCccccc-----CccCCCcceeeEEEEchHHeEECCCCcc-h-hhhhhch
Confidence            9999987655432 99999999999999997654310     11 2479999999999999999999999 5 4568889


Q ss_pred             hhhhhhhhhccCCCCCC------CeEEEEecChHHHHH-HHHH-HHcCCe-EEEEeCCcH---HHHHHHHhcCCcEEEcC
Q 018382          165 GVTVFSPLSHFGLKQSG------LRGGILGLGGVGHMG-VLIA-KAMGHH-VTVISSSDK---KRVEAMEHLGADQYLVS  232 (357)
Q Consensus       165 ~~ta~~~l~~~~~~~~~------~~VlI~G~g~~G~~a-i~la-~~~g~~-V~~~~~~~~---~~~~~~~~~g~~~vv~~  232 (357)
                      ++|||+++.. ..+++|      ++|||+|+|++|+++ +|+| +..|++ |++++++++   +.+.+++ +|++++ |+
T Consensus       152 ~~ta~~al~~-~~~~~g~~~~~~~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~-lGa~~v-~~  228 (357)
T 2b5w_A          152 ISITEKALEH-AYASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEE-LDATYV-DS  228 (357)
T ss_dssp             HHHHHHHHHH-HHHTTTTSCCCCCEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHH-TTCEEE-ET
T ss_pred             HHHHHHHHHh-cCCCCCcccCCCCEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHH-cCCccc-CC
Confidence            9999999955 445899      999999999999999 9999 999996 999999988   8888877 999999 87


Q ss_pred             CChhH--HHHhhCCccEEEEcCCCCCChHHHHhccccCCeEEEEccCC-CCcccchHHH----hhccceEEEEeecCHHH
Q 018382          233 SDATR--MQEAADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVIN-TPMQFLTPMV----MLGRKAITGSFIGSMKE  305 (357)
Q Consensus       233 ~~~~~--~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~----~~~~~~i~g~~~~~~~~  305 (357)
                      ++.+.  +.++.+++|+|||++|....+..++++++++|+++.+|... ....++...+    +.+++++.++.....++
T Consensus       229 ~~~~~~~i~~~~gg~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~  308 (357)
T 2b5w_A          229 RQTPVEDVPDVYEQMDFIYEATGFPKHAIQSVQALAPNGVGALLGVPSDWAFEVDAGAFHREMVLHNKALVGSVNSHVEH  308 (357)
T ss_dssp             TTSCGGGHHHHSCCEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHTTCEEEECCCCCHHH
T ss_pred             CccCHHHHHHhCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEEeCCCCCCceecHHHHhHHHHhCCeEEEEeccCCHHH
Confidence            75432  44443389999999998657889999999999999998876 4455666666    78999999998888889


Q ss_pred             HHHHHHHHHhc--C-CCccE-EEeecccHHHHHHHHHcCCccEEEEEecCC
Q 018382          306 TKEMLEFCREK--G-VTSMI-EVIKMDYVNKAFERLEKNDVRYRFVVDVAG  352 (357)
Q Consensus       306 ~~~~~~~~~~~--~-l~~~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~~~  352 (357)
                      +++++++++++  + +++.+ ++|+++++++||+.+   ...||+|+++++
T Consensus       309 ~~~~~~l~~~g~~~~~~~~i~~~~~l~~~~~A~~~~---~~~gKvvi~~~~  356 (357)
T 2b5w_A          309 FEAATVTFTKLPKWFLEDLVTGVHPLSEFEAAFDDD---DTTIKTAIEFST  356 (357)
T ss_dssp             HHHHHHHHHHSCHHHHHHHEEEEEEGGGGGGGGCCS---TTCCEEEEECCC
T ss_pred             HHHHHHHHHhCchhhhhhhcceeecHHHHHHHHHHh---CCCceEEEEecC
Confidence            99999999999  8 67888 899999999999988   346899999853

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=100.00  E-value=2.1e-53  Score=393.98  Aligned_cols=311  Identities=23%  Similarity=0.268  Sum_probs=274.6

Q ss_pred             CchhhhheeeehccCC--CCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCC-CCCCCccCccccEEEEEeC
Q 018382            3 SLDTERATIGWAAKDP--SGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGM-SNYPMVPGHEVVGEVKEVG   79 (357)
Q Consensus         3 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~-~~~p~~lG~e~~G~V~~vG   79 (357)
                      ++++|.+|+++++...  ++.++++++|.|+|+++||||||.++++|++|++++.|.++. ..+|.++|||++|+|+++|
T Consensus        22 ~~~~p~~MkA~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~E~~G~V~~vG  101 (353)
T 4dup_A           22 SMSLPQEMRFVDLKSFGGPDVMVIGKRPLPVAGEGEVLVRAEAIGVNRPDIAQRQGSYPPPKDASPILGLELSGEIVGVG  101 (353)
T ss_dssp             -CCCCSSEEEEEESSSSSGGGEEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTSSCCCTTSCSSSCCEEEEEEEEEC
T ss_pred             cCCCChheeEEEEccCCCccceEEEeccCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCccccccEEEEEEEC
Confidence            4567888888887643  455888999999999999999999999999999999998763 3568999999999999999


Q ss_pred             CCCCCCCCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccc
Q 018382           80 SEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAA  159 (357)
Q Consensus        80 ~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa  159 (357)
                      +++++|++||||+..                                   ...|+|+||++++++.++++|+++++++||
T Consensus       102 ~~v~~~~vGdrV~~~-----------------------------------~~~G~~aey~~v~~~~~~~~P~~~~~~~aa  146 (353)
T 4dup_A          102 PGVSGYAVGDKVCGL-----------------------------------ANGGAYAEYCLLPAGQILPFPKGYDAVKAA  146 (353)
T ss_dssp             TTCCSCCTTCEEEEE-----------------------------------CSSCCSBSEEEEEGGGEEECCTTCCHHHHH
T ss_pred             CCCCCCCCCCEEEEe-----------------------------------cCCCceeeEEEEcHHHcEeCCCCCCHHHHh
Confidence            999999999999753                                   257999999999999999999999999999


Q ss_pred             cccchhhhhhhhhhccCCCCCCCeEEEEe-cChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHH
Q 018382          160 PLLCAGVTVFSPLSHFGLKQSGLRGGILG-LGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRM  238 (357)
Q Consensus       160 ~~~~~~~ta~~~l~~~~~~~~~~~VlI~G-~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~  238 (357)
                      +++++++|||+++.+...+++|++|||+| +|++|++++|+|+..|++|+++++++++.+.+++ +|+++++|+++.+..
T Consensus       147 ~l~~~~~ta~~~l~~~~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-lGa~~~~~~~~~~~~  225 (353)
T 4dup_A          147 ALPETFFTVWANLFQMAGLTEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACER-LGAKRGINYRSEDFA  225 (353)
T ss_dssp             TSHHHHHHHHHHHTTTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-HTCSEEEETTTSCHH
T ss_pred             hhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-cCCCEEEeCCchHHH
Confidence            99999999999998777779999999996 5999999999999999999999999999988888 999999998876543


Q ss_pred             HHh---h-CCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCc-c-cchHHHhhccceEEEEeecCHHH-------
Q 018382          239 QEA---A-DSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPM-Q-FLTPMVMLGRKAITGSFIGSMKE-------  305 (357)
Q Consensus       239 ~~~---~-~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~-~~~~~~~~~~~~i~g~~~~~~~~-------  305 (357)
                      +.+   . +++|++|||+|.. .+..++++++++|+++.+|...+.. . ++...++.+++++.|+.......       
T Consensus       226 ~~~~~~~~~g~Dvvid~~g~~-~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~  304 (353)
T 4dup_A          226 AVIKAETGQGVDIILDMIGAA-YFERNIASLAKDGCLSIIAFLGGAVAEKVNLSPIMVKRLTVTGSTMRPRTAEEKRAIR  304 (353)
T ss_dssp             HHHHHHHSSCEEEEEESCCGG-GHHHHHHTEEEEEEEEECCCTTCSEEEEEECHHHHHTTCEEEECCSTTSCHHHHHHHH
T ss_pred             HHHHHHhCCCceEEEECCCHH-HHHHHHHHhccCCEEEEEEecCCCcccCCCHHHHHhcCceEEEEeccccchhhhHHHH
Confidence            333   2 3799999999997 8999999999999999999765542 3 66777888999999998765432       


Q ss_pred             ---HHHHHHHHHhcCCCccE-EEeecccHHHHHHHHHcCCccEEEEEec
Q 018382          306 ---TKEMLEFCREKGVTSMI-EVIKMDYVNKAFERLEKNDVRYRFVVDV  350 (357)
Q Consensus       306 ---~~~~~~~~~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~  350 (357)
                         ++++++++++|++++.+ ++|+++++++||+.+++++..||+|+++
T Consensus       305 ~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~l~~~~~~gKvvl~~  353 (353)
T 4dup_A          305 DDLLSEVWPLLEAGTVAPVIHKVFAFEDVADAHRLLEEGSHVGKVMLTV  353 (353)
T ss_dssp             HHHHHHTHHHHHHTSSCCCEEEEEEGGGHHHHHHHHHHTCCSSEEEEEC
T ss_pred             HHHHHHHHHHHHCCCccCCcceEEeHHHHHHHHHHHHhCCCCceEEEeC
Confidence               78899999999999988 9999999999999999999999999975

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=100.00  E-value=3.9e-54  Score=405.22  Aligned_cols=341  Identities=21%  Similarity=0.243  Sum_probs=284.6

Q ss_pred             heeeehccCCCCCcceeeeecCCC-CC-----CcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCC
Q 018382            9 ATIGWAAKDPSGILSPYTYTLRNT-GA-----EDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEV   82 (357)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~p~~-~~-----~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v   82 (357)
                      +|+++++. +++.++++++|.|+| .+     +||||||.++++|++|++++.|..+ ..+|.++|||++|+|+++|++|
T Consensus         2 ~MkA~~~~-~~~~l~~~~~p~P~~~~~~~~~~~eVlVkv~a~gic~~D~~~~~G~~~-~~~p~v~GhE~~G~V~~vG~~v   79 (398)
T 2dph_A            2 GNKSVVYH-GTRDLRVETVPYPKLEHNNRKLEHAVILKVVSTNICGSDQHIYRGRFI-VPKGHVLGHEITGEVVEKGSDV   79 (398)
T ss_dssp             CEEEEEEE-ETTEEEEEEECCCCSEETTEECTTCEEEEEEEEECCHHHHHHHTTSSC-CCTTCBCCCCEEEEEEEECTTC
T ss_pred             ccEEEEEE-cCCCEEEEEccCCCCCCCcCCCCCeEEEEEEEEeecHHHHHHhcCCCC-CCCCcccCCceEEEEEEECCCC
Confidence            47788776 456899999999998 68     9999999999999999999998754 4678999999999999999999


Q ss_pred             CCCCCCCEEEEccccCCCCCCcccccCccccccccccc----CccccCCCCCCCCccceEEEeeCc--ceEECCCCCCcc
Q 018382           83 SNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWS----YNDVYTDGKPTQGGFAESMVVDQK--FVVKIPDGMALE  156 (357)
Q Consensus        83 ~~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~G~~~~~~~v~~~--~~~~lP~~l~~~  156 (357)
                      ++|++||||++.+. ..||.|.+|++|.++.|++....    ....+.......|+|+||++++++  .++++|++++++
T Consensus        80 ~~~~vGDrV~~~~~-~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~G~~~~~~~G~~aey~~v~~~~~~~~~iP~~~~~~  158 (398)
T 2dph_A           80 ELMDIGDLVSVPFN-VACGRCRNCKEARSDVCENNLVNPDADLGAFGFDLKGWSGGQAEYVLVPYADYMLLKFGDKEQAM  158 (398)
T ss_dssp             CSCCTTCEEECCSB-CCCSCSHHHHTTCGGGCCCTTTCSSSSCCBTTTTBSSCCCSSBSEEEESSHHHHCEECSSHHHHH
T ss_pred             CCCCCCCEEEEcCC-CCCCCChhhhCcCcccCCCccccccccccccccccCCCCceeeeeEEeccccCeEEECCCCCChh
Confidence            99999999976654 46999999999999999872110    000000001257999999999987  899999999999


Q ss_pred             c----cccccchhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCcEEEc
Q 018382          157 Q----AAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGADQYLV  231 (357)
Q Consensus       157 ~----aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~~vv~  231 (357)
                      +    ||++++++.|||+++.. ..+++|++|||+|+|++|++++|+|+..|+ +|+++++++++.+.+++ +|++ ++|
T Consensus       159 ~~~~~aa~l~~~~~ta~~al~~-~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~-lGa~-~i~  235 (398)
T 2dph_A          159 EKIKDLTLISDILPTGFHGCVS-AGVKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSD-AGFE-TID  235 (398)
T ss_dssp             HTHHHHTTTTTHHHHHHHHHHH-TTCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHT-TTCE-EEE
T ss_pred             hhcchhhhhcCHHHHHHHHHHH-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH-cCCc-EEc
Confidence            8    89999999999999954 556999999999999999999999999999 99999999999888877 9996 788


Q ss_pred             CCChhH----HHHhhC--CccEEEEcCCCCC--------------ChHHHHhccccCCeEEEEccCC-------------
Q 018382          232 SSDATR----MQEAAD--SLDYIIDTVPANH--------------PLEPYLSLLKLDGKLILTGVIN-------------  278 (357)
Q Consensus       232 ~~~~~~----~~~~~~--~~d~v~d~~g~~~--------------~~~~~~~~l~~~G~~v~~g~~~-------------  278 (357)
                      +++.+.    +.+++.  ++|+|||++|...              .+..++++++++|+++.+|...             
T Consensus       236 ~~~~~~~~~~~~~~~~g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G~~~~~~~~~~~~~~~~  315 (398)
T 2dph_A          236 LRNSAPLRDQIDQILGKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPGIYVGSDPDPVNKDAGS  315 (398)
T ss_dssp             TTSSSCHHHHHHHHHSSSCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCSCCCSCCSSCSSHHHHT
T ss_pred             CCCcchHHHHHHHHhCCCCCCEEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEeccccccccccccccccC
Confidence            765432    344443  7999999999763              4788999999999999998762             


Q ss_pred             CCcccchHHHhhccceEEEEeecCHHHHHHHHHHHHhcCCC--c--cE-EEeecccHHHHHHHHHcCCccEEEEEecCCC
Q 018382          279 TPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVT--S--MI-EVIKMDYVNKAFERLEKNDVRYRFVVDVAGS  353 (357)
Q Consensus       279 ~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~--~--~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~~~~  353 (357)
                      ....++...++.+++++.++.....+.++++++++.+|+++  +  .+ ++|+|+++++||+.+++++. ||+|++++..
T Consensus       316 ~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~l~~~g~l~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-gKvvv~~~~~  394 (398)
T 2dph_A          316 GRLHLDFGKMWTKSIRIMTGMAPVTNYNRHLTEAILWDQMPYLSKVMNIEVITLDQAPDGYAKFDKGSP-AKFVIDPHGM  394 (398)
T ss_dssp             TEEEEEHHHHHHTTCEEECSSCCGGGTHHHHHHHHHTTCCHHHHHHHCEEEECSTTHHHHHHHHHTTCS-CEEEECTTSC
T ss_pred             CcccccHHHHhhcCCEEEEeccCcHHHHHHHHHHHHcCCCCccchhhEEEEEcHHHHHHHHHHHhcCCc-eEEEEecCcc
Confidence            22345566678899999988776677899999999999998  6  56 89999999999999999888 9999999765


Q ss_pred             cCC
Q 018382          354 KLD  356 (357)
Q Consensus       354 ~~~  356 (357)
                      ..+
T Consensus       395 ~~~  397 (398)
T 2dph_A          395 LKN  397 (398)
T ss_dssp             CCC
T ss_pred             ccC
Confidence            443

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=100.00  E-value=4.2e-53  Score=389.38  Aligned_cols=311  Identities=22%  Similarity=0.256  Sum_probs=271.5

Q ss_pred             CCCchhhhheeeehccCCCC--CcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEe
Q 018382            1 MGSLDTERATIGWAAKDPSG--ILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEV   78 (357)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~v   78 (357)
                      |+ +++|.+|+++++.+.++  .+++++++.|+|+++||||||+++++|++|++++.|.++ ..+|.++|||++|+|+++
T Consensus         1 M~-~~~p~~mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~-~~~P~i~G~e~~G~V~~v   78 (334)
T 3qwb_A            1 MK-CTIPEQQKVILIDEIGGYDVIKYEDYPVPSISEEELLIKNKYTGVNYIESYFRKGIYP-CEKPYVLGREASGTVVAK   78 (334)
T ss_dssp             -----CCSEEEEEEESSSSSGGGEEEEEEECCCCCTTEEEEEEEEEECCTTHHHHHHTSSC-CCSSEECCSEEEEEEEEE
T ss_pred             CC-CCCchheEEEEEecCCCCceeEEEeccCCCCCCCEEEEEEEEEecCHHHHHHHCCCCC-CCCCCccccceEEEEEEE
Confidence            54 57888899999864333  488899999999999999999999999999999999876 457999999999999999


Q ss_pred             CCCCCCCCCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEee-CcceEECCCCCCccc
Q 018382           79 GSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVD-QKFVVKIPDGMALEQ  157 (357)
Q Consensus        79 G~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~-~~~~~~lP~~l~~~~  157 (357)
                      |+++++|++||||++.                                    .+|+|+||++++ ++.++++|+++++++
T Consensus        79 G~~v~~~~~GdrV~~~------------------------------------~~G~~aey~~v~~~~~~~~~P~~~~~~~  122 (334)
T 3qwb_A           79 GKGVTNFEVGDQVAYI------------------------------------SNSTFAQYSKISSQGPVMKLPKGTSDEE  122 (334)
T ss_dssp             CTTCCSCCTTCEEEEE------------------------------------CSSCSBSEEEEETTSSEEECCTTCCHHH
T ss_pred             CCCCCCCCCCCEEEEe------------------------------------eCCcceEEEEecCcceEEECCCCCCHHH
Confidence            9999999999999754                                    479999999999 999999999999999


Q ss_pred             ---cccccchhhhhhhhhhccCCCCCCCeEEEEe-cChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCC
Q 018382          158 ---AAPLLCAGVTVFSPLSHFGLKQSGLRGGILG-LGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSS  233 (357)
Q Consensus       158 ---aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G-~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~  233 (357)
                         ||++++.++|||+++.+...+++|++|||+| +|++|++++|+++..|++|+++++++++.+.+++ +|+++++|++
T Consensus       123 ~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-~ga~~~~~~~  201 (334)
T 3qwb_A          123 LKLYAAGLLQVLTALSFTNEAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKE-YGAEYLINAS  201 (334)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-TTCSEEEETT
T ss_pred             hhhhhhhhhHHHHHHHHHHHhccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCCcEEEeCC
Confidence               8889999999999998887889999999998 5999999999999999999999999999988877 9999999988


Q ss_pred             ChhHHHH---hh--CCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCc-ccchHHHhhccceEEEEeec----CH
Q 018382          234 DATRMQE---AA--DSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPM-QFLTPMVMLGRKAITGSFIG----SM  303 (357)
Q Consensus       234 ~~~~~~~---~~--~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~i~g~~~~----~~  303 (357)
                      +.+..+.   ..  .++|++||++|.. .++.++++++++|+++.+|...+.. .++...++.+++++.++...    ..
T Consensus       202 ~~~~~~~~~~~~~~~g~D~vid~~g~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (334)
T 3qwb_A          202 KEDILRQVLKFTNGKGVDASFDSVGKD-TFEISLAALKRKGVFVSFGNASGLIPPFSITRLSPKNITLVRPQLYGYIADP  280 (334)
T ss_dssp             TSCHHHHHHHHTTTSCEEEEEECCGGG-GHHHHHHHEEEEEEEEECCCTTCCCCCBCGGGGTTTTCEEECCCGGGGSCSH
T ss_pred             CchHHHHHHHHhCCCCceEEEECCChH-HHHHHHHHhccCCEEEEEcCCCCCCCCcchhhhhhCceEEEEEEeccccCCH
Confidence            7654443   33  2799999999986 8999999999999999999876543 56677778899999876543    23


Q ss_pred             HH----HHHHHHHHHhcCCCccE-EEeecccHHHHHHHHHcCCccEEEEEecC
Q 018382          304 KE----TKEMLEFCREKGVTSMI-EVIKMDYVNKAFERLEKNDVRYRFVVDVA  351 (357)
Q Consensus       304 ~~----~~~~~~~~~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~~  351 (357)
                      ++    ++++++++.+|++++.+ ++|+++++++||+.+++++..||++++++
T Consensus       281 ~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~~  333 (334)
T 3qwb_A          281 EEWKYYSDEFFGLVNSKKLNIKIYKTYPLRDYRTAAADIESRKTVGKLVLEIP  333 (334)
T ss_dssp             HHHHHHHHHHHHHHHTTSSCCCEEEEEEGGGHHHHHHHHHTTCCCBEEEEECC
T ss_pred             HHHHHHHHHHHHHHHCCCccCceeeEEcHHHHHHHHHHHHhCCCceEEEEecC
Confidence            33    47899999999999988 99999999999999999999999999985

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=100.00  E-value=2.8e-54  Score=406.77  Aligned_cols=319  Identities=22%  Similarity=0.347  Sum_probs=276.3

Q ss_pred             CcceeeeecCC-CCCCcEEEEEeeeccccchHHHHhcCCC-------CCCCCCccCccccEEEEEeCCCC------CCCC
Q 018382           21 ILSPYTYTLRN-TGAEDVYIKVLYCGICHTDIHQIKNDLG-------MSNYPMVPGHEVVGEVKEVGSEV------SNFK   86 (357)
Q Consensus        21 ~~~~~~~~~p~-~~~~evlV~v~~~~~~~~D~~~~~g~~~-------~~~~p~~lG~e~~G~V~~vG~~v------~~~~   86 (357)
                      .++++++|.|+ |+++||||||.++++|++|++++.|...       ...+|.++|||++|+|+++|+++      ++|+
T Consensus        41 ~l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~~~P~i~G~E~~G~V~~vG~~v~~~~~~~~~~  120 (404)
T 3ip1_A           41 EVRVEEVPEPRIEKPTEIIIKVKACGICGSDVHMAQTDEEGYILYPGLTGFPVTLGHEFSGVVVEAGPEAINRRTNKRFE  120 (404)
T ss_dssp             EEEEEEECCCCCCSTTEEEEEEEEEECCHHHHHHHCBCTTSBBSCCSCBCSSEECCCEEEEEEEEECTTCEETTTTEECC
T ss_pred             ceEEEEcCCCCCCCcCEEEEEEeEeeeCHHHHHHhcCCCCccccccccCCCCcccCccceEEEEEECCCccccccCCCCC
Confidence            68889999999 9999999999999999999999987421       24678999999999999999999      8899


Q ss_pred             CCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCc------ccccc
Q 018382           87 VGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMAL------EQAAP  160 (357)
Q Consensus        87 ~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~------~~aa~  160 (357)
                      +||||++.+.. .||.|.+|+.|.++.|+.....       |...+|+|+||++++++.++++|+++++      .++|+
T Consensus       121 vGdrV~~~~~~-~Cg~C~~C~~g~~~~C~~~~~~-------g~~~~G~~aey~~v~~~~~~~iP~~~~~~~~~~~~~aa~  192 (404)
T 3ip1_A          121 IGEPVCAEEML-WCGHCRPCAEGFPNHCENLNEL-------GFNVDGAFAEYVKVDAKYAWSLRELEGVYEGDRLFLAGS  192 (404)
T ss_dssp             TTCEEEECSEE-CCSCSHHHHTTCGGGCTTCEEB-------TTTBCCSSBSEEEEEGGGEEECGGGBTTBCTHHHHHHHH
T ss_pred             CCCEEEECCcc-CCCCCHHHHCcCcccCcccccc-------CCCCCCCCcceEEechHHeEeccccccccccccchhHHh
Confidence            99999877664 5999999999999999987543       3457899999999999999999998864      45889


Q ss_pred             ccchhhhhhhhhhcc-CCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHH
Q 018382          161 LLCAGVTVFSPLSHF-GLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGADQYLVSSDATRM  238 (357)
Q Consensus       161 ~~~~~~ta~~~l~~~-~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~  238 (357)
                      ++.+++|||+++... ..+++|++|||+|+|++|++++|+|+..|+ +|+++++++++.+.+++ +|+++++|+++.+..
T Consensus       193 l~~~~~ta~~al~~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~-lGa~~vi~~~~~~~~  271 (404)
T 3ip1_A          193 LVEPTSVAYNAVIVRGGGIRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKE-LGADHVIDPTKENFV  271 (404)
T ss_dssp             THHHHHHHHHHHTTTSCCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHH-HTCSEEECTTTSCHH
T ss_pred             hhhHHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-cCCCEEEcCCCCCHH
Confidence            999999999998754 367999999999999999999999999999 89999999999988887 999999998775544


Q ss_pred             H---HhhC--CccEEEEcCCCC-CChHHHHhcc----ccCCeEEEEccCCCCcccchHHHhhccceEEEEeecC-HHHHH
Q 018382          239 Q---EAAD--SLDYIIDTVPAN-HPLEPYLSLL----KLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGS-MKETK  307 (357)
Q Consensus       239 ~---~~~~--~~d~v~d~~g~~-~~~~~~~~~l----~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~-~~~~~  307 (357)
                      +   ++++  ++|+|||++|.. ..+..+.+++    +++|+++.+|.......++...++.+++++.|+.... .++++
T Consensus       272 ~~i~~~t~g~g~D~vid~~g~~~~~~~~~~~~l~~~~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~  351 (404)
T 3ip1_A          272 EAVLDYTNGLGAKLFLEATGVPQLVWPQIEEVIWRARGINATVAIVARADAKIPLTGEVFQVRRAQIVGSQGHSGHGTFP  351 (404)
T ss_dssp             HHHHHHTTTCCCSEEEECSSCHHHHHHHHHHHHHHCSCCCCEEEECSCCCSCEEECHHHHHHTTCEEEECCCCCSTTHHH
T ss_pred             HHHHHHhCCCCCCEEEECCCCcHHHHHHHHHHHHhccCCCcEEEEeCCCCCCCcccHHHHhccceEEEEecCCCchHHHH
Confidence            3   3333  799999999986 2455666666    9999999999887777788888899999999998754 67899


Q ss_pred             HHHHHHHhcCCCc--cE-EEeecccHHHHHHHHHcCCccEEEEEecCCC
Q 018382          308 EMLEFCREKGVTS--MI-EVIKMDYVNKAFERLEKNDVRYRFVVDVAGS  353 (357)
Q Consensus       308 ~~~~~~~~~~l~~--~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~~~~  353 (357)
                      ++++++++| ++.  .+ ++|+++++++||+.+.    .||+|+++++.
T Consensus       352 ~~~~ll~~g-l~~~~~i~~~~~l~~~~~A~~~~~----~GKvvl~~~~~  395 (404)
T 3ip1_A          352 RVISLMASG-MDMTKIISKTVSMEEIPEYIKRLQ----TDKSLVKVTML  395 (404)
T ss_dssp             HHHHHHHTT-CCGGGGCCEEECGGGHHHHHHHTT----TCTTCSCEEEE
T ss_pred             HHHHHHHcC-CChhheEEEEeeHHHHHHHHHHHh----CCcEEEecCCC
Confidence            999999999 764  56 9999999999999987    57888887554

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=3e-53  Score=399.46  Aligned_cols=336  Identities=21%  Similarity=0.249  Sum_probs=279.5

Q ss_pred             heeeehccCCCCCcceeeeecCCCC-CCc------EEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCC
Q 018382            9 ATIGWAAKDPSGILSPYTYTLRNTG-AED------VYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSE   81 (357)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~p~~~-~~e------vlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~   81 (357)
                      +|+++++. +++.++++++|.|+|. ++|      |||||.++++|++|+++++|.++ ..+|.++|||++|+|+++|++
T Consensus         2 ~Mka~~~~-~~~~l~~~~~p~P~~~~~~e~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-~~~p~v~GhE~~G~V~~vG~~   79 (398)
T 1kol_A            2 GNRGVVYL-GSGKVEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTT-AQVGLVLGHEITGEVIEKGRD   79 (398)
T ss_dssp             CEEEEEEE-ETTEEEEEEECCCCSBCTTSCBCSSCEEEEEEEEECCHHHHHHHTTCSC-CCTTCBCCCCEEEEEEEECTT
T ss_pred             ccEEEEEe-cCCceEEEEecCCCCCCCCcccccceEEEEEEEEeechhhHHHHcCCCC-CCCCcccCcccEEEEEEECCC
Confidence            47788776 4567889999999997 899      99999999999999999998754 356899999999999999999


Q ss_pred             CCCCCCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCC----CCCCccceEEEeeCc--ceEECCCCCCc
Q 018382           82 VSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGK----PTQGGFAESMVVDQK--FVVKIPDGMAL  155 (357)
Q Consensus        82 v~~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~G~~~~~~~v~~~--~~~~lP~~l~~  155 (357)
                      +++|++||||++.+ ...||.|.+|++|.++.|+.......+ ...|.    ...|+|+||++++++  .++++|+++++
T Consensus        80 v~~~~vGDrV~~~~-~~~cg~C~~C~~g~~~~C~~~~~~~~~-~~~g~~~~~~~~G~~aey~~v~~~~~~~~~~P~~~~~  157 (398)
T 1kol_A           80 VENLQIGDLVSVPF-NVACGRCRSCKEMHTGVCLTVNPARAG-GAYGYVDMGDWTGGQAEYVLVPYADFNLLKLPDRDKA  157 (398)
T ss_dssp             CCSCCTTCEEECCS-EECCSSSHHHHTTCGGGCSSSCSSSSC-EEBTCTTSCCBCCCSBSEEEESSHHHHCEECSCHHHH
T ss_pred             CCcCCCCCEEEECC-cCCCCCChHHhCcCcccCCCccccccc-ceeeeccCCCCCceeeeEEEecchhCeEEECCCCcch
Confidence            99999999997654 456999999999999999876421000 00111    246999999999987  89999999999


Q ss_pred             cc----cccccchhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCcEEE
Q 018382          156 EQ----AAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGADQYL  230 (357)
Q Consensus       156 ~~----aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~~vv  230 (357)
                      ++    +|++++++.|||+++.. ..+++|++|||+|+|++|++++|+|+.+|+ +|+++++++++.+.+++ +|++ ++
T Consensus       158 ~~~~~~aa~l~~~~~ta~~al~~-~~~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~-lGa~-~i  234 (398)
T 1kol_A          158 MEKIRDLTCLSDILPTGYHGAVT-AGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKA-QGFE-IA  234 (398)
T ss_dssp             HHTHHHHGGGGTHHHHHHHHHHH-TTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH-TTCE-EE
T ss_pred             hhhcccccccccHHHHHHHHHHH-cCCCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHH-cCCc-EE
Confidence            88    78999999999999975 455999999999999999999999999999 79999999999998877 9997 67


Q ss_pred             cCCChh----HHHHhhC--CccEEEEcCCCCC---------------ChHHHHhccccCCeEEEEccC-CC---------
Q 018382          231 VSSDAT----RMQEAAD--SLDYIIDTVPANH---------------PLEPYLSLLKLDGKLILTGVI-NT---------  279 (357)
Q Consensus       231 ~~~~~~----~~~~~~~--~~d~v~d~~g~~~---------------~~~~~~~~l~~~G~~v~~g~~-~~---------  279 (357)
                      ++++.+    .+.++++  ++|+|||++|...               .+..++++++++|+++.+|.. ..         
T Consensus       235 ~~~~~~~~~~~v~~~t~g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~  314 (398)
T 1kol_A          235 DLSLDTPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGLYVTEDPGAVDAAA  314 (398)
T ss_dssp             ETTSSSCHHHHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSCCCSCCTTCSSHHH
T ss_pred             ccCCcchHHHHHHHHhCCCCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEeccccCCccccccccc
Confidence            776432    3444443  7999999999762               478899999999999999865 11         


Q ss_pred             ---CcccchHHHhhccceEEEEeecCHHHHHHHHHHHHhcCCC---ccE-EEeecccHHHHHHHHHcCCccEEEEEecCC
Q 018382          280 ---PMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVT---SMI-EVIKMDYVNKAFERLEKNDVRYRFVVDVAG  352 (357)
Q Consensus       280 ---~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~---~~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~~~  352 (357)
                         ...++...++.+++++.++.....+.++++++++.+|+++   +.+ ++|+++++++||+.+++++. ||+|++++.
T Consensus       315 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~g~l~~~~~~i~~~~~l~~~~~A~~~~~~~~~-gKvvi~~~~  393 (398)
T 1kol_A          315 KIGSLSIRFGLGWAKSHSFHTGQTPVMKYNRALMQAIMWDRINIAEVVGVQVISLDDAPRGYGEFDAGVP-KKFVIDPHK  393 (398)
T ss_dssp             HTTCCCCCHHHHHHTTCEEEESSCCHHHHHHHHHHHHHTTSCCHHHHHTEEEECGGGHHHHHHHHHHTCS-CEEEECTTC
T ss_pred             ccccccccHHHHhhcccEEEecccChHHHHHHHHHHHHcCCCCCccceeEEEEcHHHHHHHHHHHhCCCc-eEEEEEeCC
Confidence               1234555677889999887655557789999999999998   345 89999999999999999887 999999854

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=100.00  E-value=1.9e-53  Score=406.49  Aligned_cols=340  Identities=17%  Similarity=0.149  Sum_probs=287.4

Q ss_pred             chhhhheeeehccCCC-------------CCcceeeeecCCCCCCcEEEEEeeeccccchHHHHh---------------
Q 018382            4 LDTERATIGWAAKDPS-------------GILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIK---------------   55 (357)
Q Consensus         4 ~~~~~~~~~~~~~~~~-------------~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~---------------   55 (357)
                      .++|.+|+++++...+             +.++++++|.|+|+++||||||+++++|++|++...               
T Consensus        19 ~~~p~tmkA~v~~~~~~~~~~~~~~~~~~~~l~~~e~p~P~~~~~eVlVrV~a~gic~sD~~~~~~~~~~~~~~~~~~~~   98 (447)
T 4a0s_A           19 APVPDTYLALHLRAEDADMFKGVADKDVRKSLRLGEVPMPELAPDEVLVAVMASSINYNTVWSAMFEPIPTFHFLKQNAR   98 (447)
T ss_dssp             SCCCSEEEEEEEEGGGTTTTTTCSSCCHHHHCEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCSSCHHHHHHHHHT
T ss_pred             cCCChhheeeeeeccccccccccccCCCCCCceEEeccCCCCCCCeEEEEEEEEEECcHHhhhhccCcccchhhhhhhcc
Confidence            3678899999987443             378899999999999999999999999999986432               


Q ss_pred             -cCCC-CCCCC-CccCccccEEEEEeCCCCCCCCCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCC
Q 018382           56 -NDLG-MSNYP-MVPGHEVVGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQ  132 (357)
Q Consensus        56 -g~~~-~~~~p-~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  132 (357)
                       |.++ ...+| .++|||++|+|+++|++|++|++||||++.+. .+|+.|. |..+.++.|....+.+.      ....
T Consensus        99 ~g~~~~~~~~P~~v~GhE~~G~V~~vG~~V~~~~vGDrV~~~~~-~~~~~~~-~~~~~~~~c~~~~~~G~------~~~~  170 (447)
T 4a0s_A           99 QGGWATRHDQPYHVLGSDCSGVVVRTGIGVRRWKPGDHVIVHPA-HVDEQEP-ATHGDGMLGTEQRAWGF------ETNF  170 (447)
T ss_dssp             TCGGGGGGCCSEEECCSCEEEEEEEECTTCCSCCTTCEEEECSE-ECCTTSG-GGGTCTTCSTTCEETTT------TSSS
T ss_pred             cCccccccCCCCcccccceeEEEEEECCCCCCCCCCCEEEEecC-cCcCccc-ccccccccccccccccc------cCCC
Confidence             1111 12456 69999999999999999999999999977654 4577666 55577899987654422      1135


Q ss_pred             CccceEEEeeCcceEECCCCCCccccccccchhhhhhhhhhcc--CCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEE
Q 018382          133 GGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHF--GLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTV  209 (357)
Q Consensus       133 G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~--~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~  209 (357)
                      |+|+||++++++.++++|+++++++||++++++.|||+++...  ..+++|++|||+|+ |++|++++|+|+..|++|++
T Consensus       171 G~~aey~~v~~~~~~~iP~~ls~~~aA~l~~~~~tA~~al~~~~~~~~~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~  250 (447)
T 4a0s_A          171 GGLAEYGVVRASQLLPKPAHLTWEEAAVSPLCAGTAYRMLVSDRGAQMKQGDIVLIWGASGGLGSYAIQFVKNGGGIPVA  250 (447)
T ss_dssp             CSSBSEEEEEGGGEEECCTTSCHHHHHTSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEE
T ss_pred             CceeeeeecCHHHcEECCCCCCHHHHHHhHHHHHHHHHHHHhhhccCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEE
Confidence            9999999999999999999999999999999999999999643  66699999999997 99999999999999999999


Q ss_pred             EeCCcHHHHHHHHhcCCcEEEcCCChh---------------------HHHHhhC-CccEEEEcCCCCCChHHHHhcccc
Q 018382          210 ISSSDKKRVEAMEHLGADQYLVSSDAT---------------------RMQEAAD-SLDYIIDTVPANHPLEPYLSLLKL  267 (357)
Q Consensus       210 ~~~~~~~~~~~~~~~g~~~vv~~~~~~---------------------~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~  267 (357)
                      +++++++.+.+++ +|+++++++.+.+                     .+.+..+ ++|+|||++|.. .+..+++++++
T Consensus       251 ~~~~~~~~~~~~~-lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~g~Dvvid~~G~~-~~~~~~~~l~~  328 (447)
T 4a0s_A          251 VVSSAQKEAAVRA-LGCDLVINRAELGITDDIADDPRRVVETGRKLAKLVVEKAGREPDIVFEHTGRV-TFGLSVIVARR  328 (447)
T ss_dssp             EESSHHHHHHHHH-TTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHHHHHHHHHHSSCCSEEEECSCHH-HHHHHHHHSCT
T ss_pred             EeCCHHHHHHHHh-cCCCEEEecccccccccccccccccchhhhHHHHHHHHHhCCCceEEEECCCch-HHHHHHHHHhc
Confidence            9999999988877 9999988765422                     2333333 799999999996 88999999999


Q ss_pred             CCeEEEEccCCCC-cccchHHHhhccceEEEEeecCHHHHHHHHHHHHhcCCCccE-EEeecccHHHHHHHHHcCCccEE
Q 018382          268 DGKLILTGVINTP-MQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMI-EVIKMDYVNKAFERLEKNDVRYR  345 (357)
Q Consensus       268 ~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~Gk  345 (357)
                      +|+++.+|...+. ..++...++.+.+++.|+..+..+++.++++++++|.+++.+ ++|+++++++||+.+++++..||
T Consensus       329 ~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~GK  408 (447)
T 4a0s_A          329 GGTVVTCGSSSGYLHTFDNRYLWMKLKKIVGSHGANHEEQQATNRLFESGAVVPAMSAVYPLAEAAEACRVVQTSRQVGK  408 (447)
T ss_dssp             TCEEEESCCTTCSEEEEEHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTSSCCCEEEEEEGGGHHHHHHHHHTTCCSSE
T ss_pred             CCEEEEEecCCCcccccCHHHHHhCCCEEEecCCCCHHHHHHHHHHHHcCCcccceeEEEcHHHHHHHHHHHhcCCCceE
Confidence            9999999976653 346667778899999999998888999999999999999988 99999999999999999999999


Q ss_pred             EEEecCCC
Q 018382          346 FVVDVAGS  353 (357)
Q Consensus       346 vvi~~~~~  353 (357)
                      ++|.+.++
T Consensus       409 vvv~~~~~  416 (447)
T 4a0s_A          409 VAVLCMAP  416 (447)
T ss_dssp             EEEESSCC
T ss_pred             EEEEeCCC
Confidence            99988544

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=100.00  E-value=3.2e-52  Score=384.47  Aligned_cols=306  Identities=20%  Similarity=0.288  Sum_probs=263.2

Q ss_pred             hhhhheeeehccC--CCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCC-CCCCCCccCccccEEEEEeCCC
Q 018382            5 DTERATIGWAAKD--PSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLG-MSNYPMVPGHEVVGEVKEVGSE   81 (357)
Q Consensus         5 ~~~~~~~~~~~~~--~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~-~~~~p~~lG~e~~G~V~~vG~~   81 (357)
                      .+|.+|+++++..  +++.++++++|.|+|+++||||||+++++|++|++++.|.++ ...+|.++|||++|+|+++|++
T Consensus        17 ~~p~~MkA~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~vG~~   96 (342)
T 4eye_A           17 QGPGSMKAIQAQSLSGPEGLVYTDVETPGAGPNVVVVDVKAAGVCFPDYLMTKGEYQLKMEPPFVPGIETAGVVRSAPEG   96 (342)
T ss_dssp             -CCCEEEEEEECSSSGGGGEEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHTTCSSSCCCSSBCCCSEEEEEEEECCTT
T ss_pred             cCCcceEEEEEecCCCCceeEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCCccceeEEEEEEEECCC
Confidence            4688899998854  344588999999999999999999999999999999999875 3478999999999999999999


Q ss_pred             CCCCCCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccc
Q 018382           82 VSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPL  161 (357)
Q Consensus        82 v~~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~  161 (357)
                      ++ |++||||++.                                   ...|+|+||++++++.++++|+++++++||++
T Consensus        97 v~-~~vGDrV~~~-----------------------------------~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l  140 (342)
T 4eye_A           97 SG-IKPGDRVMAF-----------------------------------NFIGGYAERVAVAPSNILPTPPQLDDAEAVAL  140 (342)
T ss_dssp             SS-CCTTCEEEEE-----------------------------------CSSCCSBSEEEECGGGEEECCTTSCHHHHHHH
T ss_pred             CC-CCCCCEEEEe-----------------------------------cCCCcceEEEEEcHHHeEECCCCCCHHHHHHh
Confidence            99 9999999754                                   25799999999999999999999999999999


Q ss_pred             cchhhhhhhhhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHH-
Q 018382          162 LCAGVTVFSPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQ-  239 (357)
Q Consensus       162 ~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~-  239 (357)
                      +++++|||+++.+...+++|++|||+|+ |++|++++|+|+..|++|+++++++++.+.+++ +|++++++++ .+..+ 
T Consensus       141 ~~~~~ta~~~l~~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-~ga~~v~~~~-~~~~~~  218 (342)
T 4eye_A          141 IANYHTMYFAYARRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKS-VGADIVLPLE-EGWAKA  218 (342)
T ss_dssp             TTHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-HTCSEEEESS-TTHHHH
T ss_pred             hhHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-cCCcEEecCc-hhHHHH
Confidence            9999999999977777799999999997 999999999999999999999999999988888 9999999887 44433 


Q ss_pred             --HhhC--CccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCC-cccchHHHhhccceEEEEeecCH---------HH
Q 018382          240 --EAAD--SLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTP-MQFLTPMVMLGRKAITGSFIGSM---------KE  305 (357)
Q Consensus       240 --~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~~~---------~~  305 (357)
                        +..+  ++|++|||+|.. .+..++++++++|+++.+|...+. ..++...++.+++++.++..+..         +.
T Consensus       219 v~~~~~~~g~Dvvid~~g~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~  297 (342)
T 4eye_A          219 VREATGGAGVDMVVDPIGGP-AFDDAVRTLASEGRLLVVGFAAGGIPTIKVNRLLLRNASLIGVAWGEFLRTHADYLYET  297 (342)
T ss_dssp             HHHHTTTSCEEEEEESCC---CHHHHHHTEEEEEEEEEC----------CCCCGGGTTCEEEECCHHHHHHHCTTHHHHH
T ss_pred             HHHHhCCCCceEEEECCchh-HHHHHHHhhcCCCEEEEEEccCCCCCccCHHHHhhcCCEEEEEehhhhhhcCHHHHHHH
Confidence              3333  799999999997 899999999999999999876543 34555567789999999986432         46


Q ss_pred             HHHHHHHHHhcCCCccE-EEeecccHHHHHHHHHcCCccEEEEEec
Q 018382          306 TKEMLEFCREKGVTSMI-EVIKMDYVNKAFERLEKNDVRYRFVVDV  350 (357)
Q Consensus       306 ~~~~~~~~~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~  350 (357)
                      ++.++++++++ +++.+ ++|+++++++||+.+++++..||+|+++
T Consensus       298 ~~~~~~l~~~g-l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~P  342 (342)
T 4eye_A          298 QAGLEKLVAEG-MRPPVSARIPLSEGRQALQDFADGKVYGKMVLVP  342 (342)
T ss_dssp             HHHHHHHHHTT-CCCCEEEEEEGGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             HHHHHHHHHcC-CCCCcceEEeHHHHHHHHHHHHhCCCCceEEEeC
Confidence            88999999999 99988 9999999999999999999999999874

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=100.00  E-value=1.5e-52  Score=390.29  Aligned_cols=327  Identities=20%  Similarity=0.263  Sum_probs=271.0

Q ss_pred             eeeehccCCCCCcceeeeecCCCCC-CcEEEEEeeeccccchHHHHhc--CCCCCCC---CCccCccccEEEEEeCCCCC
Q 018382           10 TIGWAAKDPSGILSPYTYTLRNTGA-EDVYIKVLYCGICHTDIHQIKN--DLGMSNY---PMVPGHEVVGEVKEVGSEVS   83 (357)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~p~~~~-~evlV~v~~~~~~~~D~~~~~g--~~~~~~~---p~~lG~e~~G~V~~vG~~v~   83 (357)
                      |+++++.+.+.+++++++|.|+|++ +||||||+++++|++|++++.|  .++...+   |.++|||++|+|++  ++ +
T Consensus         1 MkA~~~~~~g~~l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~p~v~G~E~~G~V~~--~~-~   77 (366)
T 2cdc_A            1 MKAIIVKPPNAGVQVKDVDEKKLDSYGKIKIRTIYNGICGADREIVNGKLTLSTLPKGKDFLVLGHEAIGVVEE--SY-H   77 (366)
T ss_dssp             CEEEEECTTSCCCEEEECCGGGSCCCSSEEEEEEEEEECHHHHHHHTTCC-------CCSCEECCSEEEEEECS--CC-S
T ss_pred             CeEEEEeCCCCceEEEECcCCCCCCCCEEEEEEEEEeeccccHHHHcCCCCCCCCCcCCCCCcCCcceEEEEEe--CC-C
Confidence            4566665433348899999999999 9999999999999999999998  5553456   89999999999999  77 8


Q ss_pred             CCCCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCC-CCCccceEEEeeCcceEECCCCCCcccccccc
Q 018382           84 NFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKP-TQGGFAESMVVDQKFVVKIPDGMALEQAAPLL  162 (357)
Q Consensus        84 ~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~  162 (357)
                      +|++||||++.+.. .||.|.+|+.|.++.|+...+...     |.. .+|+|+||++++++.++++|++++ ++|| ++
T Consensus        78 ~~~~GDrV~~~~~~-~cg~C~~C~~g~~~~C~~~~~~~~-----g~~~~~G~~aey~~v~~~~~~~iP~~l~-~~Aa-l~  149 (366)
T 2cdc_A           78 GFSQGDLVMPVNRR-GCGICRNCLVGRPDFCETGEFGEA-----GIHKMDGFMREWWYDDPKYLVKIPKSIE-DIGI-LA  149 (366)
T ss_dssp             SCCTTCEEEECSEE-CCSSSHHHHTTCGGGCSSSCCEEE-----TTBEECCSCBSEEEECGGGEEEECGGGT-TTGG-GH
T ss_pred             CCCCCCEEEEcCCC-CCCCChhhhCcCcccCCCCCcccC-----CccCCCCceeEEEEechHHeEECcCCcc-hhhh-hc
Confidence            89999999876655 699999999999999997643210     222 469999999999999999999999 8764 78


Q ss_pred             chhhhhhhhhh--c--cCCCC--C-------CCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCc---HHHHHHHHhcCC
Q 018382          163 CAGVTVFSPLS--H--FGLKQ--S-------GLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSD---KKRVEAMEHLGA  226 (357)
Q Consensus       163 ~~~~ta~~~l~--~--~~~~~--~-------~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~---~~~~~~~~~~g~  226 (357)
                      .++.|||+++.  +  ...++  +       |++|||+|+|++|++++|+++..|++|+++++++   ++.+.+++ +|+
T Consensus       150 ~~~~ta~~al~~~~~~~~~~~~~~~~~~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~-~ga  228 (366)
T 2cdc_A          150 QPLADIEKSIEEILEVQKRVPVWTCDDGTLNCRKVLVVGTGPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEE-TKT  228 (366)
T ss_dssp             HHHHHHHHHHHHHHHHGGGSSCCSCTTSSSTTCEEEEESCHHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHH-HTC
T ss_pred             CcHHHHHHHHHhhhhcccCccccccccccCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHH-hCC
Confidence            89999999998  3  44557  8       9999999999999999999999999999999998   88877776 999


Q ss_pred             cEEEcCCChhH---HHHhhCCccEEEEcCCCCCCh-HHHHhccccCCeEEEEccCCCC-cccchHH---HhhccceEEEE
Q 018382          227 DQYLVSSDATR---MQEAADSLDYIIDTVPANHPL-EPYLSLLKLDGKLILTGVINTP-MQFLTPM---VMLGRKAITGS  298 (357)
Q Consensus       227 ~~vv~~~~~~~---~~~~~~~~d~v~d~~g~~~~~-~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~---~~~~~~~i~g~  298 (357)
                      +++ | ++ +.   +.+...++|+|||++|....+ +.++++++++|+++.+|..... ..++...   ++.+++++.|+
T Consensus       229 ~~v-~-~~-~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~i~g~  305 (366)
T 2cdc_A          229 NYY-N-SS-NGYDKLKDSVGKFDVIIDATGADVNILGNVIPLLGRNGVLGLFGFSTSGSVPLDYKTLQEIVHTNKTIIGL  305 (366)
T ss_dssp             EEE-E-CT-TCSHHHHHHHCCEEEEEECCCCCTHHHHHHGGGEEEEEEEEECSCCCSCEEEEEHHHHHHHHHTTCEEEEC
T ss_pred             cee-c-hH-HHHHHHHHhCCCCCEEEECCCChHHHHHHHHHHHhcCCEEEEEecCCCCccccChhhhHHHHhcCcEEEEe
Confidence            988 7 54 32   222225899999999987567 8999999999999999886654 4566666   78899999999


Q ss_pred             eecCHHHHHHHHHHHHhcC------CCccE-EEeecccHHHHHHHH-HcCCccEEEEEecC
Q 018382          299 FIGSMKETKEMLEFCREKG------VTSMI-EVIKMDYVNKAFERL-EKNDVRYRFVVDVA  351 (357)
Q Consensus       299 ~~~~~~~~~~~~~~~~~~~------l~~~i-~~~~~~~~~~a~~~~-~~~~~~Gkvvi~~~  351 (357)
                      ..+..++++++++++++|.      +++.+ ++|+++++++||+.+ .++...||+|++++
T Consensus       306 ~~~~~~~~~~~~~l~~~g~i~~~~~~~~~i~~~~~l~~~~~A~~~l~~~~~~~gKvvi~~~  366 (366)
T 2cdc_A          306 VNGQKPHFQQAVVHLASWKTLYPKAAKMLITKTVSINDEKELLKVLREKEHGEIKIRILWE  366 (366)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHSHHHHTTSEEEEEETTCHHHHHHHHHCCCTTCCEEEEECC
T ss_pred             cCCCHHHHHHHHHHHHcCCCCcccchhhcEEEEEcHHHHHHHHHHHhhhcCCceEEEEecC
Confidence            8888889999999999998      66778 899999999999983 33566899999864

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=100.00  E-value=3.8e-52  Score=380.85  Aligned_cols=308  Identities=21%  Similarity=0.228  Sum_probs=261.5

Q ss_pred             hhheeeehccCCC--CCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCC-----CCCCCCCccCccccEEEEEeC
Q 018382            7 ERATIGWAAKDPS--GILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDL-----GMSNYPMVPGHEVVGEVKEVG   79 (357)
Q Consensus         7 ~~~~~~~~~~~~~--~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~-----~~~~~p~~lG~e~~G~V~~vG   79 (357)
                      |++|+++++...+  ..++++++|.|+|+++|||||+.++++|++|+++++|..     ....+|.++|||++|+|+++|
T Consensus         4 m~~Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~p~v~G~E~~G~V~~vG   83 (321)
T 3tqh_A            4 MKEMKAIQFDQFGPPKVLKLVDTPTPEYRKNQMLIKVHAASLNPIDYKTRNGSGFVAKKLKNNLPSGLGYDFSGEVIELG   83 (321)
T ss_dssp             -CEEEEEEESSSCSGGGEEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHTTCSHHHHHHTTSCSBCCCCEEEEEEEEEC
T ss_pred             cccceEEEEccCCCcceeEEEecCCCCCCCCEEEEEEEEEEcCHHHHHHhcCCccccccccCCCCCcccceeEEEEEEeC
Confidence            4578888875433  348889999999999999999999999999999998831     234678999999999999999


Q ss_pred             CCCCCCCCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccc
Q 018382           80 SEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAA  159 (357)
Q Consensus        80 ~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa  159 (357)
                      +++++|++||||++.+..                               ...+|+|+||++++++.++++|+++++++||
T Consensus        84 ~~v~~~~~GdrV~~~~~~-------------------------------~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa  132 (321)
T 3tqh_A           84 SDVNNVNIGDKVMGIAGF-------------------------------PDHPCCYAEYVCASPDTIIQKLEKLSFLQAA  132 (321)
T ss_dssp             TTCCSCCTTCEEEEECST-------------------------------TTCCCCSBSEEEECGGGEEECCTTSCHHHHH
T ss_pred             CCCCCCCCCCEEEEccCC-------------------------------CCCCCcceEEEEecHHHhccCCCCCCHHHHh
Confidence            999999999999765311                               1257999999999999999999999999999


Q ss_pred             cccchhhhhhhhhhccCCCCCCCeEEEEe-cChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHH
Q 018382          160 PLLCAGVTVFSPLSHFGLKQSGLRGGILG-LGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRM  238 (357)
Q Consensus       160 ~~~~~~~ta~~~l~~~~~~~~~~~VlI~G-~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~  238 (357)
                      ++++++.|||+++ +...+++|++|||+| +|++|++++|+|+..|++|+++++ +++.+.+++ +|+++++|+++.+.+
T Consensus       133 ~l~~~~~ta~~al-~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~-~~~~~~~~~-lGa~~~i~~~~~~~~  209 (321)
T 3tqh_A          133 SLPTAGLTALQAL-NQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTAS-KRNHAFLKA-LGAEQCINYHEEDFL  209 (321)
T ss_dssp             HSHHHHHHHHHHH-HHTTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEEC-HHHHHHHHH-HTCSEEEETTTSCHH
T ss_pred             hhhhHHHHHHHHH-HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEec-cchHHHHHH-cCCCEEEeCCCcchh
Confidence            9999999999999 555669999999997 599999999999999999999874 556677766 999999999887634


Q ss_pred             HHhhCCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCcccchHHHhhccceEEEEe-ecCHHHHHHHHHHHHhcC
Q 018382          239 QEAADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSF-IGSMKETKEMLEFCREKG  317 (357)
Q Consensus       239 ~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~-~~~~~~~~~~~~~~~~~~  317 (357)
                      .+...++|+||||+|.. ....++++++++|+++.++......  ....+..+++++.++. ....++++++++++.+++
T Consensus       210 ~~~~~g~D~v~d~~g~~-~~~~~~~~l~~~G~iv~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~  286 (321)
T 3tqh_A          210 LAISTPVDAVIDLVGGD-VGIQSIDCLKETGCIVSVPTITAGR--VIEVAKQKHRRAFGLLKQFNIEELHYLGKLVSEDK  286 (321)
T ss_dssp             HHCCSCEEEEEESSCHH-HHHHHGGGEEEEEEEEECCSTTHHH--HHHHHHHTTCEEECCCCCCCHHHHHHHHHHHHTTS
T ss_pred             hhhccCCCEEEECCCcH-HHHHHHHhccCCCEEEEeCCCCchh--hhhhhhhcceEEEEEecCCCHHHHHHHHHHHHCCC
Confidence            44447999999999998 6689999999999999997643221  2234567888888854 345688999999999999


Q ss_pred             CCccE-EEeecccHHHHHHHHHcCCccEEEEEecC
Q 018382          318 VTSMI-EVIKMDYVNKAFERLEKNDVRYRFVVDVA  351 (357)
Q Consensus       318 l~~~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~~  351 (357)
                      +++.+ ++|+++++++||+.+++++..||+|++++
T Consensus       287 l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~~  321 (321)
T 3tqh_A          287 LRIEISRIFQLSEAVTAHELLETGHVRGKLVFKVR  321 (321)
T ss_dssp             SCCCEEEEECGGGHHHHHHHHHTTCCCSEEEEECC
T ss_pred             cccccccEEcHHHHHHHHHHHHcCCCCceEEEEeC
Confidence            99988 99999999999999999999999999874

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=100.00  E-value=4.2e-53  Score=391.62  Aligned_cols=313  Identities=15%  Similarity=0.156  Sum_probs=265.2

Q ss_pred             CCCchhhhheeeehcc-----CCCCCcceeee---------ecCCCCCCcEEEEEeeeccccchHHHHhcCCC-CCCCCC
Q 018382            1 MGSLDTERATIGWAAK-----DPSGILSPYTY---------TLRNTGAEDVYIKVLYCGICHTDIHQIKNDLG-MSNYPM   65 (357)
Q Consensus         1 ~~~~~~~~~~~~~~~~-----~~~~~~~~~~~---------~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~-~~~~p~   65 (357)
                      |++|++|.+|+++++.     ++++.++++++         |.|+|+++||||||+++++|++|+++++|.++ ...+|.
T Consensus         2 Ms~m~~p~~mka~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~p~   81 (349)
T 3pi7_A            2 MSPMTIPSEMKALLLVGDGYTKTPSGSALEAMEPYLEQGRIAVPAPGPSQVLIKVNLASINPSDVAFIKGQYGQPRVKGR   81 (349)
T ss_dssp             ---CCCCSEEEEEEECSCBSCSSCCCSCCCCSTTTEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCSSSCBCTTS
T ss_pred             CCCCCCchhheEEEEEccccCCCcccceEEEeecccccccCCCCCCCCCeEEEEEEEecCCHHHHHHhcccCCCCCCCCC
Confidence            7778889999999987     46788999999         99999999999999999999999999999875 346899


Q ss_pred             ccCccccEEEEEeCCCC-CCCCCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCc
Q 018382           66 VPGHEVVGEVKEVGSEV-SNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQK  144 (357)
Q Consensus        66 ~lG~e~~G~V~~vG~~v-~~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~  144 (357)
                      ++|||++|+|+++|++| ++|++||||++..                                +...+|+|+||++++++
T Consensus        82 v~G~E~~G~V~~vG~~v~~~~~vGdrV~~~~--------------------------------g~~~~G~~aey~~v~~~  129 (349)
T 3pi7_A           82 PAGFEGVGTIVAGGDEPYAKSLVGKRVAFAT--------------------------------GLSNWGSWAEYAVAEAA  129 (349)
T ss_dssp             BCCSEEEEEEEEECSSHHHHHHTTCEEEEEC--------------------------------TTSSCCSSBSEEEEEGG
T ss_pred             CccceEEEEEEEECCCccCCCCCCCEEEEec--------------------------------cCCCCccceeeEeechH
Confidence            99999999999999999 9999999997542                                23468999999999999


Q ss_pred             ceEECCCCCCccccccccchhhhhhhhhhccCCCCCC-CeEEEEe-cChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHH
Q 018382          145 FVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSG-LRGGILG-LGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAME  222 (357)
Q Consensus       145 ~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~-~~VlI~G-~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~  222 (357)
                      .++++|+++++++||++++.++|||.++..+.  +++ ++|||+| +|++|++++|+|+..|++|+++++++++.+.+++
T Consensus       130 ~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~--~~g~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~  207 (349)
T 3pi7_A          130 ACIPLLDTVRDEDGAAMIVNPLTAIAMFDIVK--QEGEKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKD  207 (349)
T ss_dssp             GEEECCTTCCC--GGGSSHHHHHHHHHHHHHH--HHCCSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHHH
T ss_pred             HeEECCCCCCHHHHhhccccHHHHHHHHHHHh--hCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence            99999999999999999999999997766655  555 7888885 5999999999999999999999999999998887


Q ss_pred             hcCCcEEEcCCChhHHHHh---h--CCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCC-Ccccch-HHHhhccceE
Q 018382          223 HLGADQYLVSSDATRMQEA---A--DSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINT-PMQFLT-PMVMLGRKAI  295 (357)
Q Consensus       223 ~~g~~~vv~~~~~~~~~~~---~--~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~-~~~~~~~~~i  295 (357)
                       +|+++++|+++.+..+.+   +  .++|+||||+|.. .+..++++++++|+++.+|.... ...++. ..++.+++++
T Consensus       208 -~Ga~~~~~~~~~~~~~~v~~~~~~~g~D~vid~~g~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i  285 (349)
T 3pi7_A          208 -IGAAHVLNEKAPDFEATLREVMKAEQPRIFLDAVTGP-LASAIFNAMPKRARWIIYGRLDPDATVIREPGQLIFQHKHI  285 (349)
T ss_dssp             -HTCSEEEETTSTTHHHHHHHHHHHHCCCEEEESSCHH-HHHHHHHHSCTTCEEEECCCSCCSCCCCSCTHHHHHSCCEE
T ss_pred             -cCCCEEEECCcHHHHHHHHHHhcCCCCcEEEECCCCh-hHHHHHhhhcCCCEEEEEeccCCCCCCCCchhhhhccccEE
Confidence             999999998876554443   3  2899999999998 67889999999999999986544 344666 7788899999


Q ss_pred             EEEeecC---------HHHHHHHHHHHHhcCCCccE-EEeecccHHHHHHHHHcCCccEEEEEec
Q 018382          296 TGSFIGS---------MKETKEMLEFCREKGVTSMI-EVIKMDYVNKAFERLEKNDVRYRFVVDV  350 (357)
Q Consensus       296 ~g~~~~~---------~~~~~~~~~~~~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~  350 (357)
                      .+++.+.         .+.++++++++++|++++.+ ++|+++++++||+.+. +...||+|+++
T Consensus       286 ~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~-~~~~gKvvl~p  349 (349)
T 3pi7_A          286 EGFWLSEWMRQFKERRGPAILEAQKRFSDGRWSTDVTAVVPLAEAIAWVPAEL-TKPNGKVFIRP  349 (349)
T ss_dssp             EECCHHHHHHHTHHHHHHHHHHC-CTTTTSSCCC-CCEEEEHHHHHHHHHHHH-TSSSSCEEEEC
T ss_pred             EEEEehhhhhhCcHHHHHHHHHHHHHHHcCCcccccceEEcHHHHHHHHHHHh-CCCCceEEEeC
Confidence            9998754         35678888899999999888 9999999999999554 45679999874

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=100.00  E-value=1.1e-51  Score=383.67  Aligned_cols=311  Identities=18%  Similarity=0.179  Sum_probs=268.3

Q ss_pred             hhhhheeeehcc-----CCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeC
Q 018382            5 DTERATIGWAAK-----DPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVG   79 (357)
Q Consensus         5 ~~~~~~~~~~~~-----~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG   79 (357)
                      ..|++|+++++.     +++..++++++|.|+|+++||||||.++++|++|++++.|..+...+|.++|||++|+|+++|
T Consensus        18 ~~m~~MkA~~~~~~~~~~~~~~l~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~v~G~E~~G~V~~vG   97 (363)
T 4dvj_A           18 LYFQSMKAVGYNKPAPITDDASLLDIELPKPAPAGHDILVEVKAVSVNPVDYKVRRSTPPDGTDWKVIGYDAAGIVSAVG   97 (363)
T ss_dssp             -CCCEEEEEEBSSCCCTTSTTSSEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHHCCC--CCSBCCCCCEEEEEEEEC
T ss_pred             hhhheeEEEEEeccCCCCCCceEEEeecCCCCCCCCEEEEEEEEEEeCHHHHHHHcCCCCCCCCCCcccceeEEEEEEeC
Confidence            346788998885     346778899999999999999999999999999999999988767889999999999999999


Q ss_pred             CCCCCCCCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccc
Q 018382           80 SEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAA  159 (357)
Q Consensus        80 ~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa  159 (357)
                      +++++|++||||+...                                +...+|+|+||++++++.++++|+++++++||
T Consensus        98 ~~v~~~~vGdrV~~~~--------------------------------~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa  145 (363)
T 4dvj_A           98 PDVTLFRPGDEVFYAG--------------------------------SIIRPGTNAEFHLVDERIVGRKPKTLDWAEAA  145 (363)
T ss_dssp             TTCCSCCTTCEEEECC--------------------------------CTTSCCSCBSEEEEEGGGCEECCTTSCHHHHH
T ss_pred             CCCCCCCCCCEEEEcc--------------------------------CCCCCccceEEEEeCHHHeeECCCCCCHHHHH
Confidence            9999999999997531                                12357999999999999999999999999999


Q ss_pred             cccchhhhhhhhhhccCCCC-----CCCeEEEEe-cChHHHHHHHHHHH-cCCeEEEEeCCcHHHHHHHHhcCCcEEEcC
Q 018382          160 PLLCAGVTVFSPLSHFGLKQ-----SGLRGGILG-LGGVGHMGVLIAKA-MGHHVTVISSSDKKRVEAMEHLGADQYLVS  232 (357)
Q Consensus       160 ~~~~~~~ta~~~l~~~~~~~-----~~~~VlI~G-~g~~G~~ai~la~~-~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~  232 (357)
                      +++++++|||+++.....++     +|++|||+| +|++|++++|+|+. .|++|+++++++++.+.+++ +|+++++|+
T Consensus       146 ~l~~~~~ta~~al~~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~-lGad~vi~~  224 (363)
T 4dvj_A          146 ALPLTSITAWEAFFDRLDVNKPVPGAAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKS-LGAHHVIDH  224 (363)
T ss_dssp             TSHHHHHHHHHHHHTTSCTTSCCTTSEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHH-TTCSEEECT
T ss_pred             hhhhHHHHHHHHHHHhhCcCcCcCCCCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHH-cCCCEEEeC
Confidence            99999999999997777767     899999998 59999999999998 48899999999999998887 999999998


Q ss_pred             CChhHHHHhh----CCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCcccchHHHhhccceEEEEeecC------
Q 018382          233 SDATRMQEAA----DSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGS------  302 (357)
Q Consensus       233 ~~~~~~~~~~----~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~------  302 (357)
                      ++ +..+++.    +++|+||||+|....+..++++++++|+++.++..   ..++...++.+++++.++....      
T Consensus       225 ~~-~~~~~v~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~---~~~~~~~~~~k~~~i~~~~~~~~~~~~~  300 (363)
T 4dvj_A          225 SK-PLAAEVAALGLGAPAFVFSTTHTDKHAAEIADLIAPQGRFCLIDDP---SAFDIMLFKRKAVSIHHELMFTRPMFGT  300 (363)
T ss_dssp             TS-CHHHHHHTTCSCCEEEEEECSCHHHHHHHHHHHSCTTCEEEECSCC---SSCCGGGGTTTTCEEEECCTTHHHHHTC
T ss_pred             CC-CHHHHHHHhcCCCceEEEECCCchhhHHHHHHHhcCCCEEEEECCC---CccchHHHhhccceEEEEEeeccccccC
Confidence            75 3333332    28999999999865788999999999999999643   3455666778889998876543      


Q ss_pred             ------HHHHHHHHHHHHhcCCCccE-EEe---ecccHHHHHHHHHcCCccEEEEEecCC
Q 018382          303 ------MKETKEMLEFCREKGVTSMI-EVI---KMDYVNKAFERLEKNDVRYRFVVDVAG  352 (357)
Q Consensus       303 ------~~~~~~~~~~~~~~~l~~~i-~~~---~~~~~~~a~~~~~~~~~~Gkvvi~~~~  352 (357)
                            .+.++++++++++|++++.+ ++|   +++++++||+.+++++..||+|+++.+
T Consensus       301 ~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~~~~l~~~~~A~~~~~~~~~~GKvVl~~~~  360 (363)
T 4dvj_A          301 PDMSEQGRLLNDVSRLVDEGRLRTTLTNRLSPINAANLKQAHALVESGTARGKVVIEGFG  360 (363)
T ss_dssp             TTTHHHHHHHHHHHHHHHHTSSCCCEEEEECSCSHHHHHHHHHHHHHTCCCSEEEEECSC
T ss_pred             cchhhHHHHHHHHHHHHHCCCeeccccceecCCCHHHHHHHHHHHHhCCCceEEEEeCcc
Confidence                  24578999999999999988 666   899999999999999999999999865

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=100.00  E-value=4.3e-53  Score=386.22  Aligned_cols=299  Identities=18%  Similarity=0.241  Sum_probs=246.5

Q ss_pred             hheeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCC
Q 018382            8 RATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKV   87 (357)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~   87 (357)
                      ++|+++++..+++.++++++|.|+|+++|||||++++++|++|++++.|.++...+|.++|||++|+|+++|+++++|++
T Consensus         3 ~tMka~~~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~v   82 (315)
T 3goh_A            3 EQHQVWAYQTKTHSVTLNSVDIPALAADDILVQNQAIGINPVDWKFIKANPINWSNGHVPGVDGAGVIVKVGAKVDSKML   82 (315)
T ss_dssp             CEEEEEEEETTTTEEEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHHHCTTCCCTTCCCCSEEEEEEEEECTTSCGGGT
T ss_pred             cceEEEEEeCCCCeeEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHcCCCCcCCCCCEeeeeeEEEEEEeCCCCCCCCC
Confidence            46888888756788999999999999999999999999999999999998877788999999999999999999999999


Q ss_pred             CCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhh
Q 018382           88 GDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVT  167 (357)
Q Consensus        88 Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~t  167 (357)
                      ||||++.+                                +...+|+|+||++++++.++++|+++++++||+++++++|
T Consensus        83 GdrV~~~~--------------------------------~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~t  130 (315)
T 3goh_A           83 GRRVAYHT--------------------------------SLKRHGSFAEFTVLNTDRVMTLPDNLSFERAAALPCPLLT  130 (315)
T ss_dssp             TCEEEEEC--------------------------------CTTSCCSSBSEEEEETTSEEECCTTSCHHHHHTSHHHHHH
T ss_pred             CCEEEEeC--------------------------------CCCCCcccccEEEEcHHHhccCcCCCCHHHHhhCccHHHH
Confidence            99997642                                1235899999999999999999999999999999999999


Q ss_pred             hhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccE
Q 018382          168 VFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDY  247 (357)
Q Consensus       168 a~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~  247 (357)
                      ||+++ +...+++|++|||+|+|++|++++|+|+..|++|++++ ++++.+.+++ +|++++++  +   .+++.+++|+
T Consensus       131 a~~al-~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~~~-lGa~~v~~--d---~~~v~~g~Dv  202 (315)
T 3goh_A          131 AWQAF-EKIPLTKQREVLIVGFGAVNNLLTQMLNNAGYVVDLVS-ASLSQALAAK-RGVRHLYR--E---PSQVTQKYFA  202 (315)
T ss_dssp             HHHHH-TTSCCCSCCEEEEECCSHHHHHHHHHHHHHTCEEEEEC-SSCCHHHHHH-HTEEEEES--S---GGGCCSCEEE
T ss_pred             HHHHH-hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEE-ChhhHHHHHH-cCCCEEEc--C---HHHhCCCccE
Confidence            99999 66667999999999999999999999999999999999 8888888888 99999984  2   3344568999


Q ss_pred             EEEcCCCCCChHHHHhccccCCeEEEEccCCCCcccchHHHhhccceEEEEee------cCH-------HHHHHHHHHHH
Q 018382          248 IIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFI------GSM-------KETKEMLEFCR  314 (357)
Q Consensus       248 v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~------~~~-------~~~~~~~~~~~  314 (357)
                      ||||+|+. ....++++++++|+++.++........+   .+.+.+.+.....      ...       +.+++++++++
T Consensus       203 v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  278 (315)
T 3goh_A          203 IFDAVNSQ-NAAALVPSLKANGHIICIQDRIPAPIDP---AFTRTISYHEIALGALHDFGDRQDWQILMQQGEALLTLIA  278 (315)
T ss_dssp             EECC--------TTGGGEEEEEEEEEECCC-------------CCSEEEEECGGGHHHHCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEECCCch-hHHHHHHHhcCCCEEEEEeCCCCccccc---hhhhcceeeEEEeecccccCChhHHHHHHHHHHHHHHHHH
Confidence            99999998 6688999999999999997644322221   1223333333222      122       24678999999


Q ss_pred             hcCCCccE-EEeecccHHHHHHHHHcCCccEEEEEecCC
Q 018382          315 EKGVTSMI-EVIKMDYVNKAFERLEKNDVRYRFVVDVAG  352 (357)
Q Consensus       315 ~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~~~  352 (357)
                      +|++++.+ ++|+++++++||+.++  +..||+++++++
T Consensus       279 ~g~l~~~i~~~~~l~~~~~A~~~~~--~~~gKvvi~~~~  315 (315)
T 3goh_A          279 QGKMEIAAPDIFRFEQMIEALDHSE--QTKLKTVLTLNE  315 (315)
T ss_dssp             TTSSCCCCCEEEEGGGHHHHHHHHH--HHCCCEEEESCC
T ss_pred             CCCcccccceEecHHHHHHHHHHHH--hcCCcEEEEecC
Confidence            99999988 9999999999999998  667999999863

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=100.00  E-value=2e-51  Score=379.88  Aligned_cols=309  Identities=20%  Similarity=0.284  Sum_probs=264.1

Q ss_pred             hheeeehccC-----CCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCC
Q 018382            8 RATIGWAAKD-----PSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEV   82 (357)
Q Consensus         8 ~~~~~~~~~~-----~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v   82 (357)
                      |+|+++++..     +++.++++++|.|+|+++||||||.++++|++|++++.|.  ...+|.++|||++|+|+++|+++
T Consensus         1 m~MkA~~~~~~G~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~--~~~~p~i~G~e~~G~V~~vG~~v   78 (346)
T 3fbg_A            1 MSLKAIGFEQPFKLSDGNLFKTFNLDIPEPKVHEILVKIQSISVNPVDTKQRLMD--VSKAPRVLGFDAIGVVESVGNEV   78 (346)
T ss_dssp             -CEEEEEBSSCCCGGGCCCCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHTTSC--CSSSCBCCCCCEEEEEEEECTTC
T ss_pred             CCcEEEEEEeccccCCCceeEeccccCCCCCCCEEEEEEEEEEcCHHHHHHHhCC--CCCCCcCcCCccEEEEEEeCCCC
Confidence            3577777654     4568999999999999999999999999999999999887  34679999999999999999999


Q ss_pred             CCCCCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCcccccccc
Q 018382           83 SNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLL  162 (357)
Q Consensus        83 ~~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~  162 (357)
                      ++|++||||+...                                +...+|+|+||++++++.++++|+++++++||+++
T Consensus        79 ~~~~~GdrV~~~~--------------------------------~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~  126 (346)
T 3fbg_A           79 TMFNQGDIVYYSG--------------------------------SPDQNGSNAEYQLINERLVAKAPKNISAEQAVSLP  126 (346)
T ss_dssp             CSCCTTCEEEECC--------------------------------CTTSCCSSBSEEEEEGGGEEECCSSSCHHHHTTSH
T ss_pred             CcCCCCCEEEEcC--------------------------------CCCCCcceeEEEEEChHHeEECCCCCCHHHhhhcc
Confidence            9999999997531                                12357999999999999999999999999999999


Q ss_pred             chhhhhhhhhhccCCCC------CCCeEEEEe-cChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCCh
Q 018382          163 CAGVTVFSPLSHFGLKQ------SGLRGGILG-LGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDA  235 (357)
Q Consensus       163 ~~~~ta~~~l~~~~~~~------~~~~VlI~G-~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~  235 (357)
                      +++.|||+++.....++      +|++|||+| +|++|++++|+|+..|++|+++++++++.+.+++ +|+++++++++.
T Consensus       127 ~~~~ta~~~l~~~~~~~~~~~~~~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~-lGa~~vi~~~~~  205 (346)
T 3fbg_A          127 LTGITAYETLFDVFGISRNRNENEGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKK-MGADIVLNHKES  205 (346)
T ss_dssp             HHHHHHHHHHHTTSCCCSSHHHHTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHH-HTCSEEECTTSC
T ss_pred             hhHHHHHHHHHHhcCCccccccCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-cCCcEEEECCcc
Confidence            99999999998777777      899999995 5999999999999999999999999999998888 999999988752


Q ss_pred             --hHHHHhh-CCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCcccchHHHhhccceEEEEeecCH---------
Q 018382          236 --TRMQEAA-DSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSM---------  303 (357)
Q Consensus       236 --~~~~~~~-~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~---------  303 (357)
                        +.+.+.. .++|+||||+|....+..++++++++|+++.++...  ..++...+..+++++.++..+..         
T Consensus       206 ~~~~~~~~~~~g~Dvv~d~~g~~~~~~~~~~~l~~~G~iv~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (346)
T 3fbg_A          206 LLNQFKTQGIELVDYVFCTFNTDMYYDDMIQLVKPRGHIATIVAFE--NDQDLNALKPKSLSFSHEFMFARPLNQTDDMI  283 (346)
T ss_dssp             HHHHHHHHTCCCEEEEEESSCHHHHHHHHHHHEEEEEEEEESSCCS--SCBCGGGGTTTTCEEEECCTTHHHHTTCTTTH
T ss_pred             HHHHHHHhCCCCccEEEECCCchHHHHHHHHHhccCCEEEEECCCC--CCCccccccccceEEEEEEEecccccchhhHH
Confidence              2233332 279999999998756789999999999999887543  33555566778899988765432         


Q ss_pred             ---HHHHHHHHHHHhcCCCccE-EEe---ecccHHHHHHHHHcCCccEEEEEecCCC
Q 018382          304 ---KETKEMLEFCREKGVTSMI-EVI---KMDYVNKAFERLEKNDVRYRFVVDVAGS  353 (357)
Q Consensus       304 ---~~~~~~~~~~~~~~l~~~i-~~~---~~~~~~~a~~~~~~~~~~Gkvvi~~~~~  353 (357)
                         +.++++++++++|++++.+ ++|   +++++++||+.+++++..||+|++++++
T Consensus       284 ~~~~~~~~~~~l~~~g~l~~~i~~~~~~~~l~~~~~A~~~~~~g~~~GKvvl~~~~~  340 (346)
T 3fbg_A          284 KHHEYLEDITNKVEQNIYQPTTTKVIEGLTTENIYQAHQILESNTMIGKLVINLNEG  340 (346)
T ss_dssp             HHHHHHHHHHHHHHTTSSCCCEEEEEESCCHHHHHHHHHHHHTTCCCSEEEEEC---
T ss_pred             HHHHHHHHHHHHHHCCCEECCccceecCCCHHHHHHHHHHHhcCCcceEEEEecCCc
Confidence               4578899999999999988 777   8999999999999999999999999765

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=100.00  E-value=1.3e-51  Score=378.02  Aligned_cols=305  Identities=22%  Similarity=0.218  Sum_probs=263.3

Q ss_pred             eeeehcc--CCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCC
Q 018382           10 TIGWAAK--DPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKV   87 (357)
Q Consensus        10 ~~~~~~~--~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~   87 (357)
                      |+++++.  +++..+++++++.|+|+++||||||+++++|++|++++.|.++...+|.++|||++|+|+++|+++++|++
T Consensus         2 MkA~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~vG~~v~~~~~   81 (325)
T 3jyn_A            2 AKRIQFSTVGGPEVLEYVDFEPEAPGPQAVVVRNKAIGLNFIDTYYRSGLYPAPFLPSGLGAEGAGVVEAVGDEVTRFKV   81 (325)
T ss_dssp             EEEEEBSSCSSGGGCEEEEECCCCCCTTEEEEEEEEEECCHHHHHHHHTSSCCSSSSBCCCCCEEEEEEEECTTCCSCCT
T ss_pred             cEEEEEecCCCcceeEEeecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCCCCCCCCCCceeEEEEEEECCCCCCCCC
Confidence            4555554  44456889999999999999999999999999999999998876678999999999999999999999999


Q ss_pred             CCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhh
Q 018382           88 GDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVT  167 (357)
Q Consensus        88 Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~t  167 (357)
                      ||||++..                                  ...|+|+||++++++.++++|+++++++||++++.++|
T Consensus        82 GdrV~~~~----------------------------------~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~t  127 (325)
T 3jyn_A           82 GDRVAYGT----------------------------------GPLGAYSEVHVLPEANLVKLADSVSFEQAAALMLKGLT  127 (325)
T ss_dssp             TCEEEESS----------------------------------SSSCCSBSEEEEEGGGEEECCTTSCHHHHHHHHHHHHH
T ss_pred             CCEEEEec----------------------------------CCCccccceEEecHHHeEECCCCCCHHHHhhhhhhHHH
Confidence            99997531                                  25799999999999999999999999999999999999


Q ss_pred             hhhhhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHh---hC
Q 018382          168 VFSPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEA---AD  243 (357)
Q Consensus       168 a~~~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~---~~  243 (357)
                      ||+++.+...+++|++|||+|+ |++|++++|+++..|++|+++++++++.+.+++ +|+++++|+++.+..+.+   ..
T Consensus       128 a~~~l~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-~Ga~~~~~~~~~~~~~~~~~~~~  206 (325)
T 3jyn_A          128 VQYLLRQTYQVKPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKA-LGAWETIDYSHEDVAKRVLELTD  206 (325)
T ss_dssp             HHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH-HTCSEEEETTTSCHHHHHHHHTT
T ss_pred             HHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCCCEEEeCCCccHHHHHHHHhC
Confidence            9999998888899999999984 999999999999999999999999999988887 999999998876544433   33


Q ss_pred             --CccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCc-ccchHHHhhc-cceEEEEee----cCHH----HHHHHHH
Q 018382          244 --SLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPM-QFLTPMVMLG-RKAITGSFI----GSMK----ETKEMLE  311 (357)
Q Consensus       244 --~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~-~~~i~g~~~----~~~~----~~~~~~~  311 (357)
                        ++|++||++|.. .+..++++++++|+++.+|...+.. .++...++.+ .+.+.+...    .+.+    .++++++
T Consensus       207 ~~g~Dvvid~~g~~-~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (325)
T 3jyn_A          207 GKKCPVVYDGVGQD-TWLTSLDSVAPRGLVVSFGNASGPVSGVNLGILAQKDSVYVTRPTLGSYANNAQNLQTMADELFD  285 (325)
T ss_dssp             TCCEEEEEESSCGG-GHHHHHTTEEEEEEEEECCCTTCCCCSCCTHHHHHTTSCEEECCCHHHHSCSTTHHHHHHHHHHH
T ss_pred             CCCceEEEECCChH-HHHHHHHHhcCCCEEEEEecCCCCCCCCCHHHHhhcCcEEEEeeeeeeecCCHHHHHHHHHHHHH
Confidence              799999999996 8999999999999999999876543 4566666555 556554332    2223    3458899


Q ss_pred             HHHhcCCCccE-EEeecccHHHHHHHHHcCCccEEEEEec
Q 018382          312 FCREKGVTSMI-EVIKMDYVNKAFERLEKNDVRYRFVVDV  350 (357)
Q Consensus       312 ~~~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~  350 (357)
                      ++.+|++++.+ ++|+++++++||+.+++++..||+|+.+
T Consensus       286 l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~Gkvvl~p  325 (325)
T 3jyn_A          286 MLASGKLKVDGIEQYALKDAAKAQIELSARRTTGSTILIP  325 (325)
T ss_dssp             HHHTTSSCCCCCEEEEGGGHHHHHHHHHTTCCCSCEEEEC
T ss_pred             HHHCCCeeCccccEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence            99999999988 9999999999999999999999999864

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=100.00  E-value=5.1e-51  Score=376.34  Aligned_cols=309  Identities=16%  Similarity=0.179  Sum_probs=261.1

Q ss_pred             hhheeeehccCCCCC---cceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCC-CCCCCccCccccEEEEEeCCCC
Q 018382            7 ERATIGWAAKDPSGI---LSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGM-SNYPMVPGHEVVGEVKEVGSEV   82 (357)
Q Consensus         7 ~~~~~~~~~~~~~~~---~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~-~~~p~~lG~e~~G~V~~vG~~v   82 (357)
                      +++|+++++...+++   ++++++|.|+|+++||||||+++++|++|++++.|.++. ..+|.++|||++|+|+++|+++
T Consensus         2 ~~~mka~~~~~~g~p~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~E~~G~V~~vG~~v   81 (340)
T 3gms_A            2 SLHGKLIQFHKFGNPKDVLQVEYKNIEPLKDNEVFVRMLVRPINPSDLIPITGAYAHRIPLPNIPGYEGVGIVENVGAFV   81 (340)
T ss_dssp             CCEEEEEEESSCSCHHHHEEEEEEECCCCCTTEEEEEEEEEECCHHHHGGGGTTTTTTSCSSBCCCSCCEEEEEEECTTS
T ss_pred             CcccEEEEEecCCCchheEEEEecCCCCCCCCEEEEEEEEecCCHHHHHHhcCCCCCCCCCCCcCCcceEEEEEEeCCCC
Confidence            357888887654544   889999999999999999999999999999999998763 5789999999999999999999


Q ss_pred             CCCCCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCcccccccc
Q 018382           83 SNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLL  162 (357)
Q Consensus        83 ~~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~  162 (357)
                      ++|++||||+..                                   ..+|+|+||++++++.++++|+++++++||+++
T Consensus        82 ~~~~vGdrV~~~-----------------------------------~~~G~~aey~~v~~~~~~~vP~~l~~~~aa~l~  126 (340)
T 3gms_A           82 SRELIGKRVLPL-----------------------------------RGEGTWQEYVKTSADFVVPIPDSIDDFTAAQMY  126 (340)
T ss_dssp             CGGGTTCEEEEC-----------------------------------SSSCSSBSEEEEEGGGEEECCTTSCHHHHTTSS
T ss_pred             CCCCCCCEEEec-----------------------------------CCCccceeEEEcCHHHeEECCCCCCHHHHhhhc
Confidence            999999999642                                   257999999999999999999999999999999


Q ss_pred             chhhhhhhhhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHH-
Q 018382          163 CAGVTVFSPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQE-  240 (357)
Q Consensus       163 ~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~-  240 (357)
                      +.++|||+++.+...+++|++|||+|+ |++|++++|+|+..|++|+++++++++.+.+++ +|+++++|+++.+..+. 
T Consensus       127 ~~~~ta~~~~~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-lga~~~~~~~~~~~~~~~  205 (340)
T 3gms_A          127 INPLTAWVTCTETLNLQRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLR-LGAAYVIDTSTAPLYETV  205 (340)
T ss_dssp             HHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH-HTCSEEEETTTSCHHHHH
T ss_pred             chHHHHHHHHHHhcccCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-CCCcEEEeCCcccHHHHH
Confidence            999999999988777899999999998 699999999999999999999999999998888 99999999877554433 


Q ss_pred             --hhC--CccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCcccchHHHh-hccceEEEEee----------cCHHH
Q 018382          241 --AAD--SLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVM-LGRKAITGSFI----------GSMKE  305 (357)
Q Consensus       241 --~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~i~g~~~----------~~~~~  305 (357)
                        .+.  ++|++|||+|.. ....++++++++|+++.+|...+. .++...+. ...+++.....          ...+.
T Consensus       206 ~~~~~~~g~Dvvid~~g~~-~~~~~~~~l~~~G~iv~~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (340)
T 3gms_A          206 MELTNGIGADAAIDSIGGP-DGNELAFSLRPNGHFLTIGLLSGI-QVNWAEIVTKAKVHANIFHLRHWNDEVSPYKWQET  283 (340)
T ss_dssp             HHHTTTSCEEEEEESSCHH-HHHHHHHTEEEEEEEEECCCTTSC-CCCHHHHHHTSCCEEEECCHHHHHHHSCHHHHHHH
T ss_pred             HHHhCCCCCcEEEECCCCh-hHHHHHHHhcCCCEEEEEeecCCC-CCCHHHhhhcccceEEEEEehhhhhhcCHHHHHHH
Confidence              333  799999999998 667777999999999999876542 33333332 23344443332          12357


Q ss_pred             HHHHHHHHHhcCCCc-cE-EEeecccHHHHHHHHHcCCc-cEEEEEecCCC
Q 018382          306 TKEMLEFCREKGVTS-MI-EVIKMDYVNKAFERLEKNDV-RYRFVVDVAGS  353 (357)
Q Consensus       306 ~~~~~~~~~~~~l~~-~i-~~~~~~~~~~a~~~~~~~~~-~Gkvvi~~~~~  353 (357)
                      ++++++++++|++++ .+ ++|+++++++||+.+++++. .||+++++.++
T Consensus       284 ~~~~~~l~~~g~l~~~~i~~~~~l~~~~~A~~~~~~~~~~~GKvvl~~~~~  334 (340)
T 3gms_A          284 FRHLIRLVENEQLRFMKVHSTYELADVKAAVDVVQSAEKTKGKVFLTSYEG  334 (340)
T ss_dssp             HHHHHHHHHTTSSCCCCEEEEEEGGGHHHHHHHHHCTTCCSSEEEEECC--
T ss_pred             HHHHHHHHHcCCCccccccEEEeHHHHHHHHHHHHhcCCCCCeEEEEEecc
Confidence            889999999999997 46 99999999999999999985 49999999765

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=100.00  E-value=5.1e-51  Score=376.56  Aligned_cols=310  Identities=20%  Similarity=0.249  Sum_probs=262.7

Q ss_pred             hhhheeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCC--CCCCCCccCccccEEEEEeCCCCC
Q 018382            6 TERATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLG--MSNYPMVPGHEVVGEVKEVGSEVS   83 (357)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~--~~~~p~~lG~e~~G~V~~vG~~v~   83 (357)
                      +|++|+++++.+.+++++++++|.|+|+++||||||.++++|++|++++.|..+  ...+|.++|||++|+|+++|++++
T Consensus         4 ~~~~mka~~~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~P~v~G~E~~G~V~~vG~~v~   83 (343)
T 3gaz_A            4 TTPTMIAAVVEEANGPFVLRKLARPQPAPGQVLVQIEASGTNPLDAKIRAGEAPHAQQPLPAILGMDLAGTVVAVGPEVD   83 (343)
T ss_dssp             --CEEEEEEECSTTCCEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCCGGGCCCSSBCCCCEEEEEEEEECTTCC
T ss_pred             CchhheEEEEecCCCceEEEeccCCCCCCCEEEEEEEEEEeCHhhHHHhCCCCCCCCCCCCcccCcceEEEEEEECCCCC
Confidence            467789998876555699999999999999999999999999999999998653  256899999999999999999999


Q ss_pred             CCCCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccc
Q 018382           84 NFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLC  163 (357)
Q Consensus        84 ~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~  163 (357)
                      +|++||||+....            +.                  ...+|+|+||++++++.++++|+++++++||++++
T Consensus        84 ~~~vGdrV~~~~~------------g~------------------~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~  133 (343)
T 3gaz_A           84 SFRVGDAVFGLTG------------GV------------------GGLQGTHAQFAAVDARLLASKPAALTMRQASVLPL  133 (343)
T ss_dssp             SCCTTCEEEEECC------------SS------------------TTCCCSSBSEEEEEGGGEEECCTTSCHHHHHTSHH
T ss_pred             CCCCCCEEEEEeC------------CC------------------CCCCcceeeEEEecHHHeeeCCCCCCHHHHHHhhh
Confidence            9999999975311            00                  12579999999999999999999999999999999


Q ss_pred             hhhhhhhhhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhH---HH
Q 018382          164 AGVTVFSPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATR---MQ  239 (357)
Q Consensus       164 ~~~ta~~~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~---~~  239 (357)
                      +++|||+++.+...+++|++|||+|+ |++|++++|+|+..|++|+++ .++++.+.+++ +|++. ++ ++.+.   +.
T Consensus       134 ~~~ta~~~l~~~~~~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~~~-lGa~~-i~-~~~~~~~~~~  209 (343)
T 3gaz_A          134 VFITAWEGLVDRAQVQDGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYVRD-LGATP-ID-ASREPEDYAA  209 (343)
T ss_dssp             HHHHHHHHHTTTTCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHHHH-HTSEE-EE-TTSCHHHHHH
T ss_pred             hHHHHHHHHHHhcCCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHHHH-cCCCE-ec-cCCCHHHHHH
Confidence            99999999977777799999999995 999999999999999999999 78888888877 99998 66 44333   33


Q ss_pred             HhhC--CccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCcccchHHHhhccceEEEEeecCH-----------HHH
Q 018382          240 EAAD--SLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSM-----------KET  306 (357)
Q Consensus       240 ~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~-----------~~~  306 (357)
                      +.+.  ++|+|||++|.. .+..++++++++|+++.++...   .++...++.+++++.+++....           +.+
T Consensus       210 ~~~~~~g~D~vid~~g~~-~~~~~~~~l~~~G~iv~~g~~~---~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  285 (343)
T 3gaz_A          210 EHTAGQGFDLVYDTLGGP-VLDASFSAVKRFGHVVSCLGWG---THKLAPLSFKQATYSGVFTLHTLLANEGLAHFGEML  285 (343)
T ss_dssp             HHHTTSCEEEEEESSCTH-HHHHHHHHEEEEEEEEESCCCS---CCCCHHHHHTTCEEEECCTTHHHHHTCSHHHHHHHH
T ss_pred             HHhcCCCceEEEECCCcH-HHHHHHHHHhcCCeEEEEcccC---ccccchhhhcCcEEEEEEeccchhcccchHHHHHHH
Confidence            3333  799999999986 8899999999999999998754   3455567789999999876422           678


Q ss_pred             HHHHHHHHhcCCCccE--EEeecccHHHHHHHHHcCCc----cEEEEEecCCC
Q 018382          307 KEMLEFCREKGVTSMI--EVIKMDYVNKAFERLEKNDV----RYRFVVDVAGS  353 (357)
Q Consensus       307 ~~~~~~~~~~~l~~~i--~~~~~~~~~~a~~~~~~~~~----~Gkvvi~~~~~  353 (357)
                      +++++++++|++++.+  ++|+++++++||+.+++++.    +||++++.+.+
T Consensus       286 ~~~~~l~~~g~l~~~i~~~~~~l~~~~~A~~~~~~~~~~Gr~~GK~v~~~~~~  338 (343)
T 3gaz_A          286 READALVQTGKLAPRLDPRTFSIAEIGSAYDAVLGRNDVPRQRGKIAITVEGH  338 (343)
T ss_dssp             HHHHHHHHTTCCCCCBCSCCEETTCHHHHHHHHHTCTTCCCCSSBCEEECC--
T ss_pred             HHHHHHHHCCCcccCccCcEecHHHHHHHHHHHHcCCCcccccceEEEEeccc
Confidence            9999999999999877  49999999999999998876    57999988654

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=100.00  E-value=6e-51  Score=378.22  Aligned_cols=310  Identities=19%  Similarity=0.250  Sum_probs=261.7

Q ss_pred             hhhhheeeehccCCCCC---cceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCC-CCCCCccCccccEEEEEeCC
Q 018382            5 DTERATIGWAAKDPSGI---LSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGM-SNYPMVPGHEVVGEVKEVGS   80 (357)
Q Consensus         5 ~~~~~~~~~~~~~~~~~---~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~-~~~p~~lG~e~~G~V~~vG~   80 (357)
                      ++|.+|+++++.+.+.+   ++++++|.|+|+++||||||.++++|++|++++.|.++. ..+|.++|||++|+|+++|+
T Consensus        22 ~m~~~mka~~~~~~g~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~P~v~G~E~~G~V~~vG~  101 (357)
T 1zsy_A           22 SMPARVRALVYGHHGDPAKVVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGLLPELPAVGGNEGVAQVVAVGS  101 (357)
T ss_dssp             CCCCCEEEEEESSSSCHHHHEEEEEECCCCCCTTEEEEEEEEEECCHHHHHHHHTCSSCCCCSSEECCSCCEEEEEEECT
T ss_pred             hCchhhEEEEEecCCCccceEEEeeccCCCCCCCEEEEEEEECCCCHHHhhHhcCCCCCCCCCCccccceEEEEEEEeCC
Confidence            45677889888654432   778899999999999999999999999999999997663 35789999999999999999


Q ss_pred             CCCCCCCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCcccccc
Q 018382           81 EVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAP  160 (357)
Q Consensus        81 ~v~~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~  160 (357)
                      ++++|++||||++.+                                  ...|+|+||++++++.++++|+++++++||+
T Consensus       102 ~v~~~~vGdrV~~~~----------------------------------~~~G~~aey~~v~~~~~~~iP~~l~~~~Aa~  147 (357)
T 1zsy_A          102 NVTGLKPGDWVIPAN----------------------------------AGLGTWRTEAVFSEEALIQVPSDIPLQSAAT  147 (357)
T ss_dssp             TCCSCCTTCEEEESS----------------------------------SCSCCSBSEEEEEGGGEEEECSSSCHHHHHH
T ss_pred             CCCCCCCCCEEEEcC----------------------------------CCCccceeEEecCHHHcEECCCCCCHHHHhh
Confidence            999999999997531                                  1369999999999999999999999999999


Q ss_pred             ccchhhhhhhhhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcH----HHHHHHHhcCCcEEEcCCCh
Q 018382          161 LLCAGVTVFSPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDK----KRVEAMEHLGADQYLVSSDA  235 (357)
Q Consensus       161 ~~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~----~~~~~~~~~g~~~vv~~~~~  235 (357)
                      +++.++|||+++.....+++|++|||+|+ |++|++++|+|+..|+++++++++++    +.+.+++ +|+++++|+++.
T Consensus       148 l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~-lGa~~vi~~~~~  226 (357)
T 1zsy_A          148 LGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKS-LGAEHVITEEEL  226 (357)
T ss_dssp             TTSHHHHHHHHHHHSSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHH-TTCSEEEEHHHH
T ss_pred             hcccHHHHHHHHHHHhccCCCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHh-cCCcEEEecCcc
Confidence            99999999999988777799999999997 99999999999999999888876543    3456666 999999986542


Q ss_pred             --hHHHHhhC---CccEEEEcCCCCCChHHHHhccccCCeEEEEccCCC-CcccchHHHhhccceEEEEeecC-------
Q 018382          236 --TRMQEAAD---SLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINT-PMQFLTPMVMLGRKAITGSFIGS-------  302 (357)
Q Consensus       236 --~~~~~~~~---~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~-------  302 (357)
                        +.+.++..   ++|+||||+|+. ....++++++++|+++.+|.... ...++...++.+++++.+++.+.       
T Consensus       227 ~~~~~~~~~~~~~~~Dvvid~~g~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~  305 (357)
T 1zsy_A          227 RRPEMKNFFKDMPQPRLALNCVGGK-SSTELLRQLARGGTMVTYGGMAKQPVVASVSLLIFKDLKLRGFWLSQWKKDHSP  305 (357)
T ss_dssp             HSGGGGGTTSSSCCCSEEEESSCHH-HHHHHHTTSCTTCEEEECCCCTTCCBCCCHHHHHHSCCEEEECCHHHHHHHSCH
T ss_pred             hHHHHHHHHhCCCCceEEEECCCcH-HHHHHHHhhCCCCEEEEEecCCCCCCCCCHHHHHhcCceEEEEEcchhcccCCH
Confidence              12333332   599999999987 56778999999999999986543 34566667778999999987642       


Q ss_pred             ---HHHHHHHHHHHHhcCCCccE-EEeecccHHHHHHHHHcCCccEEEEEec
Q 018382          303 ---MKETKEMLEFCREKGVTSMI-EVIKMDYVNKAFERLEKNDVRYRFVVDV  350 (357)
Q Consensus       303 ---~~~~~~~~~~~~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~  350 (357)
                         .+.++++++++.+|++++.+ ++|+++++++||+.+++++..||+|+++
T Consensus       306 ~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  357 (357)
T 1zsy_A          306 DQFKELILTLCDLIRRGQLTAPACSQVPLQDYQSALEASMKPFISSKQILTM  357 (357)
T ss_dssp             HHHHHHHHHHHHHHHTTSSCCCCEEEEEGGGHHHHHHHHTSSSCSSEEEEEC
T ss_pred             HHHHHHHHHHHHHHHcCCCcCccceEEcHHHHHHHHHHHHhCCCCCcEEEeC
Confidence               13568899999999999877 9999999999999999988889999874

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=100.00  E-value=1.9e-50  Score=374.37  Aligned_cols=310  Identities=22%  Similarity=0.285  Sum_probs=263.6

Q ss_pred             hhhhheeeehccCCCC--CcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCC-CCCCCccCccccEEEEEeCCC
Q 018382            5 DTERATIGWAAKDPSG--ILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGM-SNYPMVPGHEVVGEVKEVGSE   81 (357)
Q Consensus         5 ~~~~~~~~~~~~~~~~--~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~-~~~p~~lG~e~~G~V~~vG~~   81 (357)
                      .+|.+|+++.+.+.++  .+++++++.|+|+++||||||.++++|++|++++.|.++. ..+|.++|||++|+|+++|++
T Consensus        18 ~~~~~Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~p~v~G~E~~G~V~~vG~~   97 (354)
T 2j8z_A           18 LYFQSMLAVHFDKPGGPENLYVKEVAKPSPGEGEVLLKVAASALNRADLMQRQGQYDPPPGASNILGLEASGHVAELGPG   97 (354)
T ss_dssp             ---CEEEEEEESSCSSGGGEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTSSCCCTTSCSSSCSEEEEEEEEECSC
T ss_pred             cchhheeEEEEccCCCccceEEeecCCCCCCCCeEEEEEEEeecCHHHHHHhCCCCCCCCCCCcccceeeEEEEEEECCC
Confidence            4677888888764332  5788899999999999999999999999999999997763 346899999999999999999


Q ss_pred             C-CCCCCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCcccccc
Q 018382           82 V-SNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAP  160 (357)
Q Consensus        82 v-~~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~  160 (357)
                      + ++|++||||++.                                   ...|+|+||++++++.++++|+++++++||+
T Consensus        98 v~~~~~vGdrV~~~-----------------------------------~~~G~~aey~~v~~~~~~~iP~~ls~~~aa~  142 (354)
T 2j8z_A           98 CQGHWKIGDTAMAL-----------------------------------LPGGGQAQYVTVPEGLLMPIPEGLTLTQAAA  142 (354)
T ss_dssp             C--CCCTTCEEEEE-----------------------------------CSSCCSBSEEEEEGGGEEECCTTCCHHHHTT
T ss_pred             cCCCCCCCCEEEEe-----------------------------------cCCCcceeEEEeCHHHcEECCCCCCHHHHHh
Confidence            9 999999999753                                   1469999999999999999999999999999


Q ss_pred             ccchhhhhhhhhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHH
Q 018382          161 LLCAGVTVFSPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQ  239 (357)
Q Consensus       161 ~~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~  239 (357)
                      ++++++|||+++.....+++|++|||+|+ |++|++++|+++..|++|+++++++++.+.+++ +|++.++|.++.+..+
T Consensus       143 l~~~~~tA~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~  221 (354)
T 2j8z_A          143 IPEAWLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEK-LGAAAGFNYKKEDFSE  221 (354)
T ss_dssp             SHHHHHHHHHHHTTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-HTCSEEEETTTSCHHH
T ss_pred             ccchHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cCCcEEEecCChHHHH
Confidence            99999999999977777799999999985 999999999999999999999999999888866 9999999887755433


Q ss_pred             Hh---h--CCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCC-cccch-HHHhhccceEEEEeecCHH--------
Q 018382          240 EA---A--DSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTP-MQFLT-PMVMLGRKAITGSFIGSMK--------  304 (357)
Q Consensus       240 ~~---~--~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~-~~~~~~~~~i~g~~~~~~~--------  304 (357)
                      ++   .  .++|++||++|.. .+..++++++++|+++.+|..... ..++. ..++.+++++.++......        
T Consensus       222 ~~~~~~~~~~~d~vi~~~G~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~  300 (354)
T 2j8z_A          222 ATLKFTKGAGVNLILDCIGGS-YWEKNVNCLALDGRWVLYGLMGGGDINGPLFSKLLFKRGSLITSLLRSRDNKYKQMLV  300 (354)
T ss_dssp             HHHHHTTTSCEEEEEESSCGG-GHHHHHHHEEEEEEEEECCCTTCSCCCSCHHHHHHHTTCEEEECCSTTCCHHHHHHHH
T ss_pred             HHHHHhcCCCceEEEECCCch-HHHHHHHhccCCCEEEEEeccCCCccCCChhHHHHhCCCEEEEEEcccccccccHHHH
Confidence            33   3  2799999999998 889999999999999999876543 34566 6678899999998764321        


Q ss_pred             --HHHHHHHHHHhc---CCCccE-EEeecccHHHHHHHHHcCCccEEEEEecC
Q 018382          305 --ETKEMLEFCREK---GVTSMI-EVIKMDYVNKAFERLEKNDVRYRFVVDVA  351 (357)
Q Consensus       305 --~~~~~~~~~~~~---~l~~~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~~  351 (357)
                        .++++++++.+|   .+++.+ ++|+++++++||+.+++++..||++++++
T Consensus       301 ~~~~~~~~~l~~~g~~~~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~  353 (354)
T 2j8z_A          301 NAFTEQILPHFSTEGPQRLLPVLDRIYPVTEIQEAHKYMEANKNIGKIVLELP  353 (354)
T ss_dssp             HHHHHHTGGGGTC---CCCCCCEEEEEEGGGHHHHHHHHHTTCCSSEEEEECC
T ss_pred             HHHHHHHHHHHHcCCCccccCccceEEcHHHHHHHHHHHHhCCCCceEEEecC
Confidence              123577888899   898888 99999999999999999888899999874

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}

Probab=100.00  E-value=1.3e-50  Score=374.77  Aligned_cols=306  Identities=21%  Similarity=0.290  Sum_probs=254.1

Q ss_pred             hheeeehccCCC--CCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCC-CCCCCCccCccccEEEEEeCCCCCC
Q 018382            8 RATIGWAAKDPS--GILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLG-MSNYPMVPGHEVVGEVKEVGSEVSN   84 (357)
Q Consensus         8 ~~~~~~~~~~~~--~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~-~~~~p~~lG~e~~G~V~~vG~~v~~   84 (357)
                      |+|+++++.+.+  ..+++++++.|+|+++||||||.++++|++|++++.|.++ ...+|.++|||++|+|+++|+++++
T Consensus         2 m~mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~e~~G~V~~vG~~v~~   81 (349)
T 4a27_A            2 MEMRAVVLAGFGGLNKLRLFRKAMPEPQDGELKIRVKACGLNFIDLMVRQGNIDNPPKTPLVPGFECSGIVEALGDSVKG   81 (349)
T ss_dssp             CCEEEEEECSSSSGGGEEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSEEEEEEEEECTTCCS
T ss_pred             ceeEEEEEccCCCcceeEEEecCCCCCCCCEEEEEEEEEecCHHHHHHhCCCcCCCCCCCccccceeEEEEEEeCCCCCC
Confidence            567787775433  3688899999999999999999999999999999999875 3578999999999999999999999


Q ss_pred             CCCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccch
Q 018382           85 FKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCA  164 (357)
Q Consensus        85 ~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~  164 (357)
                      |++||||+..                                   ...|+|+||++++++.++++|+++++++||+++++
T Consensus        82 ~~~GdrV~~~-----------------------------------~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~  126 (349)
T 4a27_A           82 YEIGDRVMAF-----------------------------------VNYNAWAEVVCTPVEFVYKIPDDMSFSEAAAFPMN  126 (349)
T ss_dssp             CCTTCEEEEE-----------------------------------CSSCCSBSEEEEEGGGEEECCTTSCHHHHHTSHHH
T ss_pred             CCCCCEEEEe-----------------------------------cCCCcceEEEEecHHHeEECCCCCCHHHHHHHHHH
Confidence            9999999753                                   25799999999999999999999999999999999


Q ss_pred             hhhhhhhhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcC-CeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHH--
Q 018382          165 GVTVFSPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMG-HHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQE--  240 (357)
Q Consensus       165 ~~ta~~~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g-~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~--  240 (357)
                      ++|||+++.+...+++|++|||+|+ |++|++++|+|+..| ++|++++ ++++.+.+ + +|++++++ ++.+..++  
T Consensus       127 ~~ta~~~l~~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~-~-~ga~~~~~-~~~~~~~~~~  202 (349)
T 4a27_A          127 FVTAYVMLFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAI-K-DSVTHLFD-RNADYVQEVK  202 (349)
T ss_dssp             HHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHH-G-GGSSEEEE-TTSCHHHHHH
T ss_pred             HHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHH-H-cCCcEEEc-CCccHHHHHH
Confidence            9999999988777899999999998 999999999999986 5888887 55565554 4 89999998 55444333  


Q ss_pred             -hh-CCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCC-----------------cccchHHHhhccceEEEEeec
Q 018382          241 -AA-DSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTP-----------------MQFLTPMVMLGRKAITGSFIG  301 (357)
Q Consensus       241 -~~-~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-----------------~~~~~~~~~~~~~~i~g~~~~  301 (357)
                       +. +++|+||||+|+. .+..++++++++|+++.+|.....                 ..++...++.++.++.++...
T Consensus       203 ~~~~~g~Dvv~d~~g~~-~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~g~~~~  281 (349)
T 4a27_A          203 RISAEGVDIVLDCLCGD-NTGKGLSLLKPLGTYILYGSSNMVTGETKSFFSFAKSWWQVEKVNPIKLYEENKVIAGFSLL  281 (349)
T ss_dssp             HHCTTCEEEEEEECC--------CTTEEEEEEEEEEC-------------------------CHHHHHHHTCEEEEECHH
T ss_pred             HhcCCCceEEEECCCch-hHHHHHHHhhcCCEEEEECCCcccccccccccccccccccccccCHHHHhhcCceEEEEeeh
Confidence             33 3899999999998 668999999999999999865311                 124455677888999998763


Q ss_pred             C-----------HHHHHHHHHHHHhcCCCccE-EEeecccHHHHHHHHHcCCccEEEEEecCCC
Q 018382          302 S-----------MKETKEMLEFCREKGVTSMI-EVIKMDYVNKAFERLEKNDVRYRFVVDVAGS  353 (357)
Q Consensus       302 ~-----------~~~~~~~~~~~~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~~~~  353 (357)
                      .           .+.++++++++++|++++.+ ++|+++++++||+.+++++..||+|+++++.
T Consensus       282 ~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~l~~~~~~GKvvi~~~~~  345 (349)
T 4a27_A          282 NLLFKQGRAGLIRGVVEKLIGLYNQKKIKPVVDSLWALEEVKEAMQRIHDRGNIGKLILDVEKT  345 (349)
T ss_dssp             HHHHTSCCHHHHHHHHHHHHHHHHTTSCCCCEEEEECGGGHHHHHHHHHTTCCSSEEEEETTCC
T ss_pred             heeccccchHHHHHHHHHHHHHHHCCCccccccceECHHHHHHHHHHHHhCCCCceEEEecCCC
Confidence            2           56789999999999999988 8999999999999999999999999999764

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=5.7e-50  Score=370.46  Aligned_cols=308  Identities=20%  Similarity=0.296  Sum_probs=260.7

Q ss_pred             hhhheeeehccC--CCCCcce-eeeecCCCCCCcEEEEEeeeccccchHHHHhcCCC-CCCCCCccCccccEEEEEeCCC
Q 018382            6 TERATIGWAAKD--PSGILSP-YTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLG-MSNYPMVPGHEVVGEVKEVGSE   81 (357)
Q Consensus         6 ~~~~~~~~~~~~--~~~~~~~-~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~-~~~~p~~lG~e~~G~V~~vG~~   81 (357)
                      ++.+|+++++..  ++..+++ +++|.|+|+++||||||.++++|++|++++.|.++ ...+|.++|||++|+|+++|++
T Consensus        26 ~~~~Mka~~~~~~g~~~~l~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~P~v~G~E~~G~V~~vG~~  105 (351)
T 1yb5_A           26 GQKLMRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIEAVGDN  105 (351)
T ss_dssp             --CEEEEEEESSCSSGGGEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCSSCCCCSSBCCCSCEEEEEEEECTT
T ss_pred             CcceEEEEEEccCCCcceeEEeeecCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCcCCceeEEEEEEECCC
Confidence            344577777653  3345778 79999999999999999999999999999998764 3467899999999999999999


Q ss_pred             CCCCCCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccc
Q 018382           82 VSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPL  161 (357)
Q Consensus        82 v~~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~  161 (357)
                      +++|++||||++..                                  ...|+|+||++++++.++++|+++++++||++
T Consensus       106 v~~~~vGdrV~~~~----------------------------------~~~G~~aey~~v~~~~~~~~P~~l~~~~aA~l  151 (351)
T 1yb5_A          106 ASAFKKGDRVFTSS----------------------------------TISGGYAEYALAADHTVYKLPEKLDFKQGAAI  151 (351)
T ss_dssp             CTTCCTTCEEEESC----------------------------------CSSCSSBSEEEEEGGGEEECCTTSCHHHHTTT
T ss_pred             CCCCCCCCEEEEeC----------------------------------CCCCcceeEEEECHHHeEECCCCCCHHHHHhh
Confidence            99999999997531                                  13699999999999999999999999999999


Q ss_pred             cchhhhhhhhhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHH
Q 018382          162 LCAGVTVFSPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQE  240 (357)
Q Consensus       162 ~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~  240 (357)
                      ++++.|||+++.+...+++|++|||+|+ |++|++++|+++..|++|+++++++++.+.+++ +|+++++|.++.+..++
T Consensus       152 ~~~~~ta~~al~~~~~~~~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-~ga~~~~d~~~~~~~~~  230 (351)
T 1yb5_A          152 GIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQ-NGAHEVFNHREVNYIDK  230 (351)
T ss_dssp             HHHHHHHHHHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-TTCSEEEETTSTTHHHH
T ss_pred             hhHHHHHHHHHHHhhCCCCcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH-cCCCEEEeCCCchHHHH
Confidence            9999999999987777799999999997 999999999999999999999999999887776 99999998877654443


Q ss_pred             h---hC--CccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCcccchHHHhhccceEEEEeec--CHHHHH----HH
Q 018382          241 A---AD--SLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIG--SMKETK----EM  309 (357)
Q Consensus       241 ~---~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~--~~~~~~----~~  309 (357)
                      +   ..  ++|++||++|.. .+..++++++++|+++.+|.. ....++...++.++.++.++...  ..++++    .+
T Consensus       231 ~~~~~~~~~~D~vi~~~G~~-~~~~~~~~l~~~G~iv~~g~~-~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~l  308 (351)
T 1yb5_A          231 IKKYVGEKGIDIIIEMLANV-NLSKDLSLLSHGGRVIVVGSR-GTIEINPRDTMAKESSIIGVTLFSSTKEEFQQYAAAL  308 (351)
T ss_dssp             HHHHHCTTCEEEEEESCHHH-HHHHHHHHEEEEEEEEECCCC-SCEEECTHHHHTTTCEEEECCGGGCCHHHHHHHHHHH
T ss_pred             HHHHcCCCCcEEEEECCChH-HHHHHHHhccCCCEEEEEecC-CCCccCHHHHHhCCcEEEEEEeecCCHHHHHHHHHHH
Confidence            3   33  799999999987 788999999999999999864 33456666778899999998542  344444    45


Q ss_pred             HHHHHhcCCCccE-EEeecccHHHHHHH-HHcCCccEEEEEec
Q 018382          310 LEFCREKGVTSMI-EVIKMDYVNKAFER-LEKNDVRYRFVVDV  350 (357)
Q Consensus       310 ~~~~~~~~l~~~i-~~~~~~~~~~a~~~-~~~~~~~Gkvvi~~  350 (357)
                      .+++.++.+++.+ ++|+++++++||+. ++++...||+|+++
T Consensus       309 ~~~~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~~gKvvi~~  351 (351)
T 1yb5_A          309 QAGMEIGWLKPVIGSQYPLEKVAEAHENIIHGSGATGKMILLL  351 (351)
T ss_dssp             HHHHHHTCCCCCEEEEEEGGGHHHHHHHHHHSSCCSSEEEEEC
T ss_pred             HHHHHCCCccCccceEEcHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence            5677889999988 99999999999998 66667789999874

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=100.00  E-value=2.8e-50  Score=370.43  Aligned_cols=307  Identities=18%  Similarity=0.207  Sum_probs=259.2

Q ss_pred             eeeehcc--CCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCC--CC-CCCCCccCccccEEEEEeCCCCCC
Q 018382           10 TIGWAAK--DPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDL--GM-SNYPMVPGHEVVGEVKEVGSEVSN   84 (357)
Q Consensus        10 ~~~~~~~--~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~--~~-~~~p~~lG~e~~G~V~~vG~~v~~   84 (357)
                      |+++.+.  +++..++++++|.|+|+++||||||.++++|++|++++.|.+  +. ..+|.++|||++|+|+++|+++++
T Consensus         2 Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~   81 (333)
T 1wly_A            2 VMAAVIHKKGGPDNFVWEEVKVGSPGPGQVRLRNTAIGVNFLDTYHRAGIPHPLVVGEPPIVVGFEAAAVVEEVGPGVTD   81 (333)
T ss_dssp             CEEEEESSCSSGGGEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHC----------CCEECCCEEEEEEEEECTTCCS
T ss_pred             cEEEEEcccCCcceeEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhCCCcCCCCCCCCCccccceeEEEEEEECCCCCC
Confidence            4555544  334468889999999999999999999999999999999876  22 457899999999999999999999


Q ss_pred             CCCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccc--ccccc
Q 018382           85 FKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQ--AAPLL  162 (357)
Q Consensus        85 ~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~--aa~~~  162 (357)
                      |++||||++.+                                  ...|+|+||++++++.++++|+++++++  ||+++
T Consensus        82 ~~~GdrV~~~~----------------------------------~~~G~~aey~~v~~~~~~~iP~~~~~~~~~aa~l~  127 (333)
T 1wly_A           82 FTVGERVCTCL----------------------------------PPLGAYSQERLYPAEKLIKVPKDLDLDDVHLAGLM  127 (333)
T ss_dssp             CCTTCEEEECS----------------------------------SSCCCSBSEEEEEGGGCEECCTTCCCCHHHHHHHH
T ss_pred             CCCCCEEEEec----------------------------------CCCCcceeEEEecHHHcEeCCCCCChHHhCccchh
Confidence            99999996431                                  0269999999999999999999999999  99999


Q ss_pred             chhhhhhhhhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHH-
Q 018382          163 CAGVTVFSPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQE-  240 (357)
Q Consensus       163 ~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~-  240 (357)
                      +++.|||+++.+...+++|++|||+|+ |++|++++|+++..|++|+++++++++.+.+++ +|+++++|.++.+..++ 
T Consensus       128 ~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~-~g~~~~~d~~~~~~~~~i  206 (333)
T 1wly_A          128 LKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARK-LGCHHTINYSTQDFAEVV  206 (333)
T ss_dssp             HHHHHHHHHHHTTSCCCTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-HTCSEEEETTTSCHHHHH
T ss_pred             hhHHHHHHHHHHhhCCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCCCEEEECCCHHHHHHH
Confidence            999999999987777799999999996 999999999999999999999999988888877 99999998876544333 


Q ss_pred             --hh--CCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCC-CcccchH-HHhhcc--ceEEEEeec---CH----HH
Q 018382          241 --AA--DSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINT-PMQFLTP-MVMLGR--KAITGSFIG---SM----KE  305 (357)
Q Consensus       241 --~~--~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~-~~~~~~--~~i~g~~~~---~~----~~  305 (357)
                        ..  .++|++||++|.. .++.++++++++|+++.+|...+ ...++.. .++.++  .++.|++..   ..    +.
T Consensus       207 ~~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~  285 (333)
T 1wly_A          207 REITGGKGVDVVYDSIGKD-TLQKSLDCLRPRGMCAAYGHASGVADPIRVVEDLGVRGSLFITRPALWHYMSNRSEIDEG  285 (333)
T ss_dssp             HHHHTTCCEEEEEECSCTT-THHHHHHTEEEEEEEEECCCTTCCCCCCCHHHHTTTTTSCEEECCCGGGGSCSHHHHHHH
T ss_pred             HHHhCCCCCeEEEECCcHH-HHHHHHHhhccCCEEEEEecCCCCcCCCChhHhhhhcCCcEEEEEeehhhccCHHHHHHH
Confidence              33  2799999999995 89999999999999999987653 2445665 667788  888887542   22    36


Q ss_pred             HHHHHHHHHhcCCCccE-EEeecccHHHHHHHHHcCCccEEEEEecCC
Q 018382          306 TKEMLEFCREKGVTSMI-EVIKMDYVNKAFERLEKNDVRYRFVVDVAG  352 (357)
Q Consensus       306 ~~~~~~~~~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~~~  352 (357)
                      ++++++++.+|.+++.+ ++|+++++++||+.+++++..||+++++++
T Consensus       286 ~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~~~  333 (333)
T 1wly_A          286 SKCLFDAVKAGVLHSSVAKTFPLREAAAAHKYMGGRQTIGSIVLLPQA  333 (333)
T ss_dssp             HHHHHHHHHTTSCCCCEEEEEEGGGHHHHHHHHHHCSCCSEEEEETTC
T ss_pred             HHHHHHHHHCCCcCCCcceEEeHHHHHHHHHHHHcCCCceEEEEEeCC
Confidence            88999999999999988 999999999999999998888999998753

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=100.00  E-value=8.2e-51  Score=378.98  Aligned_cols=317  Identities=15%  Similarity=0.163  Sum_probs=260.2

Q ss_pred             chhhhheeeehccCCCCCccee-eeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCC
Q 018382            4 LDTERATIGWAAKDPSGILSPY-TYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEV   82 (357)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v   82 (357)
                      |++|.+|+++++. +++.++++ ++|.|+|+++||||||.++++|++|++++.+.   ..+|.++|||++|+|+++|+++
T Consensus         6 m~~p~~mkA~v~~-~~~~l~~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~---~~~p~v~G~e~~G~V~~vG~~v   81 (371)
T 3gqv_A            6 FIPPPQQTALTVN-DHDEVTVWNAAPCPMLPRDQVYVRVEAVAINPSDTSMRGQF---ATPWAFLGTDYAGTVVAVGSDV   81 (371)
T ss_dssp             CCCCSCEEEEEEC-TTSCEEEEEEECCCCCCTTSEEEEEEEEECCGGGGC--------CCTTSCCCSEEEEEEEEECTTC
T ss_pred             CCCchhceeEEEc-CCCceEEeccCCCCCCCCCEEEEEEEEEEcCHHHHHHhhcC---CCCCccCccccEEEEEEeCCCC
Confidence            5678899999987 56789998 99999999999999999999999999998763   3568999999999999999999


Q ss_pred             CCCCCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCcccccccc
Q 018382           83 SNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLL  162 (357)
Q Consensus        83 ~~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~  162 (357)
                      ++|++||||+        +.|..|..+                   ...+|+|+||++++++.++++|+++++++||+++
T Consensus        82 ~~~~~GdrV~--------~~~~~~~~~-------------------~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~~~  134 (371)
T 3gqv_A           82 THIQVGDRVY--------GAQNEMCPR-------------------TPDQGAFSQYTVTRGRVWAKIPKGLSFEQAAALP  134 (371)
T ss_dssp             CSCCTTCEEE--------EECCTTCTT-------------------CTTCCSSBSEEECCTTCEEECCTTCCHHHHHTSH
T ss_pred             CCCCCCCEEE--------EeccCCCCC-------------------CCCCCcCcCeEEEchhheEECCCCCCHHHHhhhh
Confidence            9999999994        445555442                   2468999999999999999999999999999999


Q ss_pred             chhhhhhhhhhcc-CCC-----------CCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEE
Q 018382          163 CAGVTVFSPLSHF-GLK-----------QSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQY  229 (357)
Q Consensus       163 ~~~~ta~~~l~~~-~~~-----------~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~v  229 (357)
                      +++.|||+++.+. ..+           ++|++|||+|+ |++|++++|+|+..|++|++++ ++++.+.+++ +|++++
T Consensus       135 ~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~~~~~-lGa~~v  212 (371)
T 3gqv_A          135 AGISTAGLAMKLLGLPLPSPSADQPPTHSKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFDLAKS-RGAEEV  212 (371)
T ss_dssp             HHHHHHHHHHHHHTCCCCCSSCSSCCCCSSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHH-TTCSEE
T ss_pred             hhHHHHHHHHHhhccCCCCCccccccccCCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHHHHHH-cCCcEE
Confidence            9999999999776 332           89999999998 9999999999999999999987 6788887777 999999


Q ss_pred             EcCCChhHHHH---hh-CCccEEEEcCCCCCChHHHHhcc-ccCCeEEEEccCCCC------cc--cc-hHHHhhccceE
Q 018382          230 LVSSDATRMQE---AA-DSLDYIIDTVPANHPLEPYLSLL-KLDGKLILTGVINTP------MQ--FL-TPMVMLGRKAI  295 (357)
Q Consensus       230 v~~~~~~~~~~---~~-~~~d~v~d~~g~~~~~~~~~~~l-~~~G~~v~~g~~~~~------~~--~~-~~~~~~~~~~i  295 (357)
                      +|+++.+..+.   ++ +++|+||||+|....+..+++++ +++|+++.+|.....      ..  +. ...++.+++++
T Consensus       213 i~~~~~~~~~~v~~~t~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~k~~~~  292 (371)
T 3gqv_A          213 FDYRAPNLAQTIRTYTKNNLRYALDCITNVESTTFCFAAIGRAGGHYVSLNPFPEHAATRKMVTTDWTLGPTIFGEGSTW  292 (371)
T ss_dssp             EETTSTTHHHHHHHHTTTCCCEEEESSCSHHHHHHHHHHSCTTCEEEEESSCCCC---CCSCEEEEECCGGGGGTSCBSC
T ss_pred             EECCCchHHHHHHHHccCCccEEEECCCchHHHHHHHHHhhcCCCEEEEEecCccccccccccceeeeeeeeeccccccc
Confidence            99988655443   33 36999999999965788999999 599999999864421      11  11 23466788888


Q ss_pred             EEEeecC--H-------HHHHHHHHHHHhcCCCccE---EEeecccHHHHHHHHHcCCccE-EEEEecCCC
Q 018382          296 TGSFIGS--M-------KETKEMLEFCREKGVTSMI---EVIKMDYVNKAFERLEKNDVRY-RFVVDVAGS  353 (357)
Q Consensus       296 ~g~~~~~--~-------~~~~~~~~~~~~~~l~~~i---~~~~~~~~~~a~~~~~~~~~~G-kvvi~~~~~  353 (357)
                      .+++...  .       +.++++++++.+|++++..   +.|+++++++||+.+++++..| |+|+++++.
T Consensus       293 ~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~l~~~~~A~~~l~~g~~~Gkkvvv~~~~~  363 (371)
T 3gqv_A          293 PAPYGRPGSEEERQFGEDLWRIAGQLVEDGRLVHHPLRVVQGGFDHIKQGMELVRKGELSGEKLVVRLEGP  363 (371)
T ss_dssp             STTTCBCCCHHHHHHHHHHHHHHHHHHHTTSSCCCCEEEEEECHHHHHHHHHHHHTTCCSSCEEEEEECCC
T ss_pred             cccccccccHHHHHHHHHHHHHHHHHHHCCeeeCCcCeecCCcHHHHHHHHHHHHcCCCceEEEEEEeCCc
Confidence            8775431  1       2245888999999999853   5699999999999999999888 677777654

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=100.00  E-value=6.7e-50  Score=372.37  Aligned_cols=308  Identities=17%  Similarity=0.199  Sum_probs=260.2

Q ss_pred             hhheeeehccCCCCC---cceeeeecCCCC--CCcEEEEEeeeccccchHHHHhcCCCC-CCCC---------CccCccc
Q 018382            7 ERATIGWAAKDPSGI---LSPYTYTLRNTG--AEDVYIKVLYCGICHTDIHQIKNDLGM-SNYP---------MVPGHEV   71 (357)
Q Consensus         7 ~~~~~~~~~~~~~~~---~~~~~~~~p~~~--~~evlV~v~~~~~~~~D~~~~~g~~~~-~~~p---------~~lG~e~   71 (357)
                      |++|+++++.+.+.+   ++++++|.|+|.  ++||||||.++++|++|++++.|.++. ..+|         .++|||+
T Consensus         1 ~~~mka~~~~~~g~~~~~l~~~~~~~P~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~P~~~~~~~p~~i~G~E~   80 (364)
T 1gu7_A            1 MITAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPCGNEG   80 (364)
T ss_dssp             CEEEEEEEESSCSCHHHHCEEEEEEECTTSCCTTEEEEEEEEEEECHHHHHHHHTCSSCCCCCBSTTCCSSCBEECCSCC
T ss_pred             CceEEEEEeccCCCchheeEEeeccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCCCCCCccccccCcccccCcee
Confidence            356888887654432   888999999887  999999999999999999999997653 3456         8999999


Q ss_pred             cEEEEEeCCCCCCCCCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCC
Q 018382           72 VGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPD  151 (357)
Q Consensus        72 ~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~  151 (357)
                      +|+|+++|+++++|++||||++.+                                  ...|+|+||++++++.++++|+
T Consensus        81 ~G~V~~vG~~v~~~~vGdrV~~~~----------------------------------~~~G~~aey~~v~~~~~~~~P~  126 (364)
T 1gu7_A           81 LFEVIKVGSNVSSLEAGDWVIPSH----------------------------------VNFGTWRTHALGNDDDFIKLPN  126 (364)
T ss_dssp             EEEEEEECTTCCSCCTTCEEEESS----------------------------------SCCCCSBSEEEEEGGGEEEECC
T ss_pred             EEEEEEeCCCCCcCCCCCEEEecC----------------------------------CCCCcchheEecCHHHeEEcCC
Confidence            999999999999999999997541                                  1469999999999999999998


Q ss_pred             -----------CCCccccccccchhhhhhhhhhccCCCCCC-CeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHH--
Q 018382          152 -----------GMALEQAAPLLCAGVTVFSPLSHFGLKQSG-LRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKK--  216 (357)
Q Consensus       152 -----------~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~-~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~--  216 (357)
                                 ++++++||+++++++|||+++.+...+++| ++|||+|+ |++|++++|+|+..|++|++++++.++  
T Consensus       127 ~~~~~~~~~~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~  206 (364)
T 1gu7_A          127 PAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLD  206 (364)
T ss_dssp             HHHHHHTTCSCCCCHHHHHTCTTHHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHH
T ss_pred             ccccccccccCCCCHHHHhhccccHHHHHHHHHHhhccCCCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccH
Confidence                       899999999999999999999987777999 99999997 999999999999999999999876654  


Q ss_pred             --HHHHHHhcCCcEEEcCCC---hh---HHHHhh----CCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCC-Cccc
Q 018382          217 --RVEAMEHLGADQYLVSSD---AT---RMQEAA----DSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINT-PMQF  283 (357)
Q Consensus       217 --~~~~~~~~g~~~vv~~~~---~~---~~~~~~----~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~  283 (357)
                        .+.+++ +|+++++|+++   .+   .+.+++    .++|+||||+|.. ....++++++++|+++.+|.... ...+
T Consensus       207 ~~~~~~~~-lGa~~vi~~~~~~~~~~~~~i~~~t~~~~~g~Dvvid~~G~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~  284 (364)
T 1gu7_A          207 EVVASLKE-LGATQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGK-SSTGIARKLNNNGLMLTYGGMSFQPVTI  284 (364)
T ss_dssp             HHHHHHHH-HTCSEEEEHHHHHCGGGHHHHHHHHHHHTCCEEEEEESSCHH-HHHHHHHTSCTTCEEEECCCCSSCCEEE
T ss_pred             HHHHHHHh-cCCeEEEecCccchHHHHHHHHHHhhccCCCceEEEECCCch-hHHHHHHHhccCCEEEEecCCCCCCccc
Confidence              456655 99999998764   33   334443    3799999999987 55588999999999999987653 3456


Q ss_pred             chHHHhhccceEEEEeecC---------HHHHHHHHHHHHhcCCCccE-EEeecc---cHHHHHHHHHcCCccEEEEEec
Q 018382          284 LTPMVMLGRKAITGSFIGS---------MKETKEMLEFCREKGVTSMI-EVIKMD---YVNKAFERLEKNDVRYRFVVDV  350 (357)
Q Consensus       284 ~~~~~~~~~~~i~g~~~~~---------~~~~~~~~~~~~~~~l~~~i-~~~~~~---~~~~a~~~~~~~~~~Gkvvi~~  350 (357)
                      +...++.+++++.+++...         .+.++++++++++|++++.+ .+|+++   ++++||+.+.+++..||+|+++
T Consensus       285 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  364 (364)
T 1gu7_A          285 PTSLYIFKNFTSAGFWVTELLKNNKELKTSTLNQIIAWYEEGKLTDAKSIETLYDGTKPLHELYQDGVANSKDGKQLITY  364 (364)
T ss_dssp             CHHHHHHSCCEEEECCHHHHHTTCHHHHHHHHHHHHHHHHHTCCCCCCCEEEECCSSSCHHHHHHHHHHTGGGSCEEEEC
T ss_pred             CHHHHhhcCcEEEEEchhHhcccCHHHHHHHHHHHHHHHHcCCcccccceEEecCchhhHHHHHHHHHhCCCCceEEEeC
Confidence            6667778999999987653         25689999999999999865 777775   9999999999988889999975

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=100.00  E-value=7.8e-51  Score=372.83  Aligned_cols=309  Identities=19%  Similarity=0.218  Sum_probs=260.9

Q ss_pred             eeeehccCC--CCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCC-CCCCCccCccccEEEEEeCCCCCCCC
Q 018382           10 TIGWAAKDP--SGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGM-SNYPMVPGHEVVGEVKEVGSEVSNFK   86 (357)
Q Consensus        10 ~~~~~~~~~--~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~-~~~p~~lG~e~~G~V~~vG~~v~~~~   86 (357)
                      |+++++.+.  +..++++++|.|+|+++|||||++++++|++|++++.|..+. ..+|.++|||++|+|+++|  +++|+
T Consensus         1 MkA~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~~G--v~~~~   78 (324)
T 3nx4_A            1 MQALILEQQDGKTLASVQHLEESQLPAGDVTVDVHWSSLNYKDALAITGKGKIIRHFPMIPGIDFAGTVHASE--DPRFH   78 (324)
T ss_dssp             CEEEEEEESSSSEEEEEEECCGGGSCCCSEEEEEEEEEECHHHHHHHHTCTTCCCSSSBCCCSEEEEEEEEES--STTCC
T ss_pred             CceEEEecCCCCceeeEeecCCCCCCCCEEEEEEEEEeCCHHHHhhhcCCCCCCCCCCccccceeEEEEEEeC--CCCCC
Confidence            455555433  334888999999999999999999999999999999998763 5789999999999999998  57899


Q ss_pred             CCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhh
Q 018382           87 VGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGV  166 (357)
Q Consensus        87 ~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~  166 (357)
                      +||||++.+    |+                         .|...+|+|+||++++++.++++|+++++++||++++.+.
T Consensus        79 vGdrV~~~~----~~-------------------------~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~  129 (324)
T 3nx4_A           79 AGQEVLLTG----WG-------------------------VGENHWGGLAERARVKGDWLVALPAGLSSRNAMIIGTAGF  129 (324)
T ss_dssp             TTCEEEEEC----TT-------------------------BTTTBCCSSBSEEEECGGGCEECCTTCCHHHHHHHHHHHH
T ss_pred             CCCEEEEcc----cc-------------------------cCCCCCCceeeEEecCHHHcEECCCCCCHHHHHHhhhHHH
Confidence            999997642    10                         1234689999999999999999999999999999999999


Q ss_pred             hhhhhhhcc--CCCCCCC-eEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhh
Q 018382          167 TVFSPLSHF--GLKQSGL-RGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAA  242 (357)
Q Consensus       167 ta~~~l~~~--~~~~~~~-~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~  242 (357)
                      |||.++...  ..+++++ +|||+|+ |++|++++|+|+..|++|+++++++++.+.+++ +|+++++|+++.+.++++.
T Consensus       130 ta~~al~~~~~~~~~~~~g~VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~~-lGa~~vi~~~~~~~~~~~~  208 (324)
T 3nx4_A          130 TAMLCVMALEDAGIRPQDGEVVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLKS-LGANRILSRDEFAESRPLE  208 (324)
T ss_dssp             HHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHH-HTCSEEEEGGGSSCCCSSC
T ss_pred             HHHHHHHHhhhcccCCCCCeEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-cCCCEEEecCCHHHHHhhc
Confidence            999988533  2235532 4999997 999999999999999999999999999999988 9999999987654433333


Q ss_pred             -CCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCC-cccchHHHhhccceEEEEeecC------HHHHHHHHHHHH
Q 018382          243 -DSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTP-MQFLTPMVMLGRKAITGSFIGS------MKETKEMLEFCR  314 (357)
Q Consensus       243 -~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~~------~~~~~~~~~~~~  314 (357)
                       +++|++||++|.. .++.++++++++|+++.+|..... ..++...++.+++++.+++...      .+.++.++++++
T Consensus       209 ~~~~d~v~d~~g~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~  287 (324)
T 3nx4_A          209 KQLWAGAIDTVGDK-VLAKVLAQMNYGGCVAACGLAGGFALPTTVMPFILRNVRLQGVDSVMTPPARRAEAWARLVKDLP  287 (324)
T ss_dssp             CCCEEEEEESSCHH-HHHHHHHTEEEEEEEEECCCTTCSEEEEESHHHHHHCCEEEECCSTTCCHHHHHHHHHHHHHHSC
T ss_pred             CCCccEEEECCCcH-HHHHHHHHHhcCCEEEEEecCCCCCCCCCHHHHhhcCeEEEEEeccccChHHHHHHHHHHHHHHH
Confidence             3799999999987 899999999999999999987653 4566667788999999987542      156788889999


Q ss_pred             hcCCCccEEEeecccHHHHHHHHHcCCccEEEEEecC
Q 018382          315 EKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVA  351 (357)
Q Consensus       315 ~~~l~~~i~~~~~~~~~~a~~~~~~~~~~Gkvvi~~~  351 (357)
                      +|++++..++|+++++++||+.+++++..||+|++++
T Consensus       288 ~g~l~~~~~~~~l~~~~~A~~~~~~~~~~gkvvv~~~  324 (324)
T 3nx4_A          288 ESFYAQAATEITLADAPKFADAIINNQVQGRTLVKIK  324 (324)
T ss_dssp             HHHHHHHEEEEEGGGHHHHHHHHHTTCCCSEEEEECC
T ss_pred             cCCCCCCceeEeHHHHHHHHHHHHhCCCCceEEEecC
Confidence            9998876689999999999999999999999999874

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=5.4e-49  Score=361.02  Aligned_cols=305  Identities=18%  Similarity=0.201  Sum_probs=258.9

Q ss_pred             eeeehccC--CCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCC
Q 018382           10 TIGWAAKD--PSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKV   87 (357)
Q Consensus        10 ~~~~~~~~--~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~   87 (357)
                      |+++++..  .+..+++++++.|+|+++||||||.++++|++|++++.|.++...+|.++|||++|+|+++|+++++|++
T Consensus         2 Mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~~   81 (327)
T 1qor_A            2 ATRIEFHKHGGPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPPPSLPSGLGTEAAGIVSKVGSGVKHIKA   81 (327)
T ss_dssp             CEEEEBSSCCSGGGCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSCCSSSSBCCCSCEEEEEEEECTTCCSCCT
T ss_pred             cEEEEEcCCCChhheEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCCCceeEEEEEEECCCCCCCCC
Confidence            45555543  3446888899999999999999999999999999999998765568999999999999999999999999


Q ss_pred             CCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhh
Q 018382           88 GDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVT  167 (357)
Q Consensus        88 Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~t  167 (357)
                      |||| +..     |                            ..+|+|+||++++++.++++|+++++++||+++++++|
T Consensus        82 GdrV-~~~-----g----------------------------~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~t  127 (327)
T 1qor_A           82 GDRV-VYA-----Q----------------------------SALGAYSSVHNIIADKAAILPAAISFEQAAASFLKGLT  127 (327)
T ss_dssp             TCEE-EES-----C----------------------------CSSCCSBSEEEEEGGGEEECCTTSCHHHHHHHHHHHHH
T ss_pred             CCEE-EEC-----C----------------------------CCCceeeeEEEecHHHcEECCCCCCHHHHHHhhhHHHH
Confidence            9999 321     0                            13599999999999999999999999999999999999


Q ss_pred             hhhhhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHh---h-
Q 018382          168 VFSPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEA---A-  242 (357)
Q Consensus       168 a~~~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~---~-  242 (357)
                      ||+++.+...+++|++|||+|+ |++|++++|+++..|++|+++++++++.+.+++ +|+++++|.++.+..+++   . 
T Consensus       128 a~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~  206 (327)
T 1qor_A          128 VYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK-AGAWQVINYREEDLVERLKEITG  206 (327)
T ss_dssp             HHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH-HTCSEEEETTTSCHHHHHHHHTT
T ss_pred             HHHHHHHhhCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cCCCEEEECCCccHHHHHHHHhC
Confidence            9999987777799999999985 999999999999999999999999988888887 999999988765544333   2 


Q ss_pred             -CCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCC-cccchHHHhhc-cceEEEEee----cC----HHHHHHHHH
Q 018382          243 -DSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTP-MQFLTPMVMLG-RKAITGSFI----GS----MKETKEMLE  311 (357)
Q Consensus       243 -~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~-~~~i~g~~~----~~----~~~~~~~~~  311 (357)
                       .++|++||++|.. .++.++++++++|+++.+|...+. ..++...++.+ .+++.+...    ..    .+.++++++
T Consensus       207 ~~~~D~vi~~~g~~-~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (327)
T 1qor_A          207 GKKVRVVYDSVGRD-TWERSLDCLQRRGLMVSFGNSSGAVTGVNLGILNQKGSLYVTRPSLQGYITTREELTEASNELFS  285 (327)
T ss_dssp             TCCEEEEEECSCGG-GHHHHHHTEEEEEEEEECCCTTCCCCCBCTHHHHHTTSCEEECCCHHHHCCSHHHHHHHHHHHHH
T ss_pred             CCCceEEEECCchH-HHHHHHHHhcCCCEEEEEecCCCCCCccCHHHHhhccceEEEccchhhhcCCHHHHHHHHHHHHH
Confidence             2799999999954 899999999999999999876543 34666666667 777765432    11    345789999


Q ss_pred             HHHhcCCCccE---EEeecccHHHHHHHHHcCCccEEEEEec
Q 018382          312 FCREKGVTSMI---EVIKMDYVNKAFERLEKNDVRYRFVVDV  350 (357)
Q Consensus       312 ~~~~~~l~~~i---~~~~~~~~~~a~~~~~~~~~~Gkvvi~~  350 (357)
                      ++.++++++.+   ++|+++++++||+.+++++..||+++++
T Consensus       286 l~~~g~l~~~i~~~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  327 (327)
T 1qor_A          286 LIASGVIKVDVAEQQKYPLKDAQRAHEILESRATQGSSLLIP  327 (327)
T ss_dssp             HHHTTSSCCCCCGGGEEEGGGHHHHHHHHHTTCCCBCCEEEC
T ss_pred             HHHCCCcccccccCcEEcHHHHHHHHHHHHhCCCCceEEEeC
Confidence            99999999865   5999999999999999988889999864

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=100.00  E-value=2.6e-48  Score=362.84  Aligned_cols=312  Identities=23%  Similarity=0.288  Sum_probs=254.6

Q ss_pred             hhhhheeeehccCCC--CCcce-eeeecCCC-CCCcEEEEEeeeccccchHHHHhcCCC---------------CCCCCC
Q 018382            5 DTERATIGWAAKDPS--GILSP-YTYTLRNT-GAEDVYIKVLYCGICHTDIHQIKNDLG---------------MSNYPM   65 (357)
Q Consensus         5 ~~~~~~~~~~~~~~~--~~~~~-~~~~~p~~-~~~evlV~v~~~~~~~~D~~~~~g~~~---------------~~~~p~   65 (357)
                      .++++|+++++...+  ..+++ +++|.|+| +++||||||.++++|++|++++.|..+               ...+|.
T Consensus        17 ~~~~~mka~~~~~~g~~~~l~~~~~~p~P~~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~~~~~~~~~~~~~~~P~   96 (375)
T 2vn8_A           17 NLYFQSMAWVIDKYGKNEVLRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNMKRDPLHVKIKGEEFPL   96 (375)
T ss_dssp             -CCCCEEEEEBSSCCSGGGCEEEEEECCCCCCSTTEEEEEEEEEEECHHHHHHHTTTTHHHHHHHHCTTCCSCTTTTCSB
T ss_pred             ccCccceeEEeccCCCccceEEeccccCCCCCCCCEEEEEEEEEEcCHHHHHHhccCccccccccccccccccccccCCc
Confidence            356678888875433  45778 89999985 999999999999999999999988531               123789


Q ss_pred             ccCccccEEEEEeCCCCCCCCCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcc
Q 018382           66 VPGHEVVGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKF  145 (357)
Q Consensus        66 ~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~  145 (357)
                      ++|||++|+|+++|+++++|++||||++.+.                                ...+|+|+||++++++.
T Consensus        97 v~G~E~~G~V~~vG~~V~~~~vGDrV~~~~~--------------------------------~~~~G~~aey~~v~~~~  144 (375)
T 2vn8_A           97 TLGRDVSGVVMECGLDVKYFKPGDEVWAAVP--------------------------------PWKQGTLSEFVVVSGNE  144 (375)
T ss_dssp             CCCCEEEEEEEEECTTCCSCCTTCEEEEECC--------------------------------TTSCCSSBSEEEEEGGG
T ss_pred             ccceeeeEEEEEeCCCCCCCCCCCEEEEecC--------------------------------CCCCccceeEEEEcHHH
Confidence            9999999999999999999999999976421                                12479999999999999


Q ss_pred             eEECCCCCCccccccccchhhhhhhhhhccCC----CCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHH
Q 018382          146 VVKIPDGMALEQAAPLLCAGVTVFSPLSHFGL----KQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEA  220 (357)
Q Consensus       146 ~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~----~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~  220 (357)
                      ++++|+++++++||+++++++|||+++.+...    +++|++|||+|+ |++|++++|+|+..|++|++++ ++++.+.+
T Consensus       145 ~~~iP~~ls~~~Aa~l~~~~~tA~~al~~~~~~~~~~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~~~  223 (375)
T 2vn8_A          145 VSHKPKSLTHTQAASLPYVALTAWSAINKVGGLNDKNCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASELV  223 (375)
T ss_dssp             EEECCTTSCHHHHTTSHHHHHHHHHHHTTTTCCCTTTCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHH
T ss_pred             eeeCCCCCCHHHHhhhHHHHHHHHHHHHHhcccccccCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHHHH
Confidence            99999999999999999999999999976666    799999999985 9999999999999999999988 56777777


Q ss_pred             HHhcCCcEEEcCCChhHHHHhh--CCccEEEEcCCCC-CChHHHHhccccCCeEEEEccCCCC-cc---cch------HH
Q 018382          221 MEHLGADQYLVSSDATRMQEAA--DSLDYIIDTVPAN-HPLEPYLSLLKLDGKLILTGVINTP-MQ---FLT------PM  287 (357)
Q Consensus       221 ~~~~g~~~vv~~~~~~~~~~~~--~~~d~v~d~~g~~-~~~~~~~~~l~~~G~~v~~g~~~~~-~~---~~~------~~  287 (357)
                      ++ +|+++++|+++.+..+++.  .++|+|||++|.. ..+..++++++++|+++.+|..... ..   +..      ..
T Consensus       224 ~~-lGa~~v~~~~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~  302 (375)
T 2vn8_A          224 RK-LGADDVIDYKSGSVEEQLKSLKPFDFILDNVGGSTETWAPDFLKKWSGATYVTLVTPFLLNMDRLGIADGMLQTGVT  302 (375)
T ss_dssp             HH-TTCSEEEETTSSCHHHHHHTSCCBSEEEESSCTTHHHHGGGGBCSSSCCEEEESCCSHHHHHHHHCHHHHHHHHHHH
T ss_pred             HH-cCCCEEEECCchHHHHHHhhcCCCCEEEECCCChhhhhHHHHHhhcCCcEEEEeCCCcccccccccccchhheeehh
Confidence            66 9999999988766655554  3899999999987 3448889999999999999864321 00   000      11


Q ss_pred             Hhh-------ccceEEEEee-cCHHHHHHHHHHHHhcCCCccE-EEeecccHHHHHHHHHcCCccEEEEEec
Q 018382          288 VML-------GRKAITGSFI-GSMKETKEMLEFCREKGVTSMI-EVIKMDYVNKAFERLEKNDVRYRFVVDV  350 (357)
Q Consensus       288 ~~~-------~~~~i~g~~~-~~~~~~~~~~~~~~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~  350 (357)
                      ++.       +...+.+... ...+.++++++++++|++++.+ ++|+++++++||+.+++++..||+|+++
T Consensus       303 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~  374 (375)
T 2vn8_A          303 VGSKALKHFWKGVHYRWAFFMASGPCLDDIAELVDAGKIRPVIEQTFPFSKVPEAFLKVERGHARGKTVINV  374 (375)
T ss_dssp             HHHHHHHHHHTTCEEEECCCCCCHHHHHHHHHHHHTTSCCCCEEEEEEGGGHHHHHHHHHHCCCSSEEEEEC
T ss_pred             hccccccccccCcceEEEEeCCCHHHHHHHHHHHHCCCcccCcCeEECHHHHHHHHHHHHcCCCCCeEEEEe
Confidence            112       3334443332 2346789999999999999988 8999999999999999998889999976

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=100.00  E-value=2.5e-48  Score=357.92  Aligned_cols=301  Identities=19%  Similarity=0.199  Sum_probs=260.6

Q ss_pred             hheeeehccC------CCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCcc----ccEEEEE
Q 018382            8 RATIGWAAKD------PSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHE----VVGEVKE   77 (357)
Q Consensus         8 ~~~~~~~~~~------~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e----~~G~V~~   77 (357)
                      ++|++|++..      +++.++++++|.|+|+++||||||+++++|++|++.+.+... ..+|.++|||    ++|+|++
T Consensus         6 ~~mka~v~~~~~~g~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~d~~~~~~~~~-~~~p~~~G~e~g~~~~G~V~~   84 (336)
T 4b7c_A            6 QINRQYQLAQRPSGLPGRDTFSFVETPLGEPAEGQILVKNEYLSLDPAMRGWMNDARS-YIPPVGIGEVMRALGVGKVLV   84 (336)
T ss_dssp             CEEEEEEECSCCSSSCCTTSEEEEEEECCCCCTTCEEEEEEEEECCTHHHHHHSCSCC-SSCCCCTTSBCCCEEEEEEEE
T ss_pred             ccccEEEEEecCCCCCCCCceEEEeccCCCCCCCEEEEEEEEEEeCHHHHhhhhcccc-cCCCCCCCcccCCceEEEEEe
Confidence            5678888753      467899999999999999999999999999999988876432 3457777877    7999999


Q ss_pred             eCCCCCCCCCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccc
Q 018382           78 VGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQ  157 (357)
Q Consensus        78 vG~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~  157 (357)
                      .  ++++|++||||++                                      .|+|+||++++++.++++|+++++.+
T Consensus        85 ~--~v~~~~vGdrV~~--------------------------------------~G~~aey~~v~~~~~~~~P~~~~~~~  124 (336)
T 4b7c_A           85 S--KHPGFQAGDYVNG--------------------------------------ALGVQDYFIGEPKGFYKVDPSRAPLP  124 (336)
T ss_dssp             E--CSTTCCTTCEEEE--------------------------------------ECCSBSEEEECCTTCEEECTTTSCGG
T ss_pred             c--CCCCCCCCCEEec--------------------------------------cCCceEEEEechHHeEEcCCCCCchH
Confidence            4  5889999999963                                      48899999999999999999998887


Q ss_pred             c--ccccchhhhhhhhhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCC
Q 018382          158 A--APLLCAGVTVFSPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSD  234 (357)
Q Consensus       158 a--a~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~  234 (357)
                      +  |+++++++|||+++.+...+++|++|||+|+ |++|++++|+++..|++|+++++++++.+.+.+++|+++++|+++
T Consensus       125 ~a~a~l~~~~~tA~~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~  204 (336)
T 4b7c_A          125 RYLSALGMTGMTAYFALLDVGQPKNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGFDGAIDYKN  204 (336)
T ss_dssp             GGGTTTSHHHHHHHHHHHHTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCSEEEETTT
T ss_pred             HHhhhcccHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCEEEECCC
Confidence            7  7899999999999977777799999999998 999999999999999999999999999988845599999999887


Q ss_pred             hhHHHHh---h-CCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCC----C---cccchHHHhhccceEEEEeecCH
Q 018382          235 ATRMQEA---A-DSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINT----P---MQFLTPMVMLGRKAITGSFIGSM  303 (357)
Q Consensus       235 ~~~~~~~---~-~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~----~---~~~~~~~~~~~~~~i~g~~~~~~  303 (357)
                      .+..+.+   . +++|++||++|.. .+..++++++++|+++.+|....    .   ..++...++.+++++.++..+..
T Consensus       205 ~~~~~~~~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~  283 (336)
T 4b7c_A          205 EDLAAGLKRECPKGIDVFFDNVGGE-ILDTVLTRIAFKARIVLCGAISQYNNKEAVRGPANYLSLLVNRARMEGMVVMDY  283 (336)
T ss_dssp             SCHHHHHHHHCTTCEEEEEESSCHH-HHHHHHTTEEEEEEEEECCCGGGGC------CCTTTTHHHHTTCEEEECCGGGG
T ss_pred             HHHHHHHHHhcCCCceEEEECCCcc-hHHHHHHHHhhCCEEEEEeecccccCCcccccchhHHHHHhCCcEEEEEEhhhh
Confidence            6544433   2 3799999999986 88999999999999999987542    1   24555677889999999988654


Q ss_pred             -----HHHHHHHHHHHhcCCCccE-EEeecccHHHHHHHHHcCCccEEEEEec
Q 018382          304 -----KETKEMLEFCREKGVTSMI-EVIKMDYVNKAFERLEKNDVRYRFVVDV  350 (357)
Q Consensus       304 -----~~~~~~~~~~~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~  350 (357)
                           +.++++++++++|++++.+ .+|+++++++||+.+++++..||+|+++
T Consensus       284 ~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvi~~  336 (336)
T 4b7c_A          284 AQRFPEGLKEMATWLAEGKLQSREDIVEGLETFPETLLKLFSGENFGKLVLKV  336 (336)
T ss_dssp             GGGHHHHHHHHHHHHHTTSSCCCEEEEECGGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             hhhhHHHHHHHHHHHHCCCcccceeeecCHHHHHHHHHHHHcCCCCceEEEeC
Confidence                 6789999999999999987 7899999999999999999999999975

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=100.00  E-value=2.3e-48  Score=361.35  Aligned_cols=306  Identities=20%  Similarity=0.292  Sum_probs=261.1

Q ss_pred             hhhhheeeehccCCCC----Ccce-eeeecCCCCCCcEEEEEeeeccccchHHHHhcCCC-CCCCCCccCccccEEEEEe
Q 018382            5 DTERATIGWAAKDPSG----ILSP-YTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLG-MSNYPMVPGHEVVGEVKEV   78 (357)
Q Consensus         5 ~~~~~~~~~~~~~~~~----~~~~-~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~-~~~~p~~lG~e~~G~V~~v   78 (357)
                      +++.+|+++.+.+.++    .+++ +++|.|+|+++||||||.++++|++|++++.|.++ ...+|.++|||++|+|+++
T Consensus        19 ~~~~~MkA~~~~~~g~~~~~~l~~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~P~i~G~E~~G~V~~v   98 (362)
T 2c0c_A           19 YFQSMMQKLVVTRLSPNFREAVTLSRDCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDPSVKPPFDIGFEGIGEVVAL   98 (362)
T ss_dssp             HHCCEEEEEEECSCCSSHHHHEEEEEEEECCCCCTTEEEEEEEEEECCTTHHHHHTTTTCTTCCSCEECCSEEEEEEEEE
T ss_pred             cchhhceEEEEeecCCCccceeEEEeecCCCCCCCCeEEEEEEEeccCHHHHHHhcCCCCCCCCCCCCCCceeEEEEEEE
Confidence            4567788988865432    4778 89999999999999999999999999999999764 3467899999999999999


Q ss_pred             CCCCC-CCCCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccc
Q 018382           79 GSEVS-NFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQ  157 (357)
Q Consensus        79 G~~v~-~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~  157 (357)
                      |++++ +|++||||++.                                    ..|+|+||++++++.++++|+. + .+
T Consensus        99 G~~V~~~~~vGdrV~~~------------------------------------~~G~~aey~~v~~~~~~~~P~~-~-~~  140 (362)
T 2c0c_A           99 GLSASARYTVGQAVAYM------------------------------------APGSFAEYTVVPASIATPVPSV-K-PE  140 (362)
T ss_dssp             CTTGGGTCCTTCEEEEE------------------------------------CSCCSBSEEEEEGGGCEECSSS-C-HH
T ss_pred             CCCccCCCCCCCEEEEc------------------------------------cCCcceeEEEEcHHHeEECCCC-c-hH
Confidence            99999 99999999753                                    3699999999999999999996 3 46


Q ss_pred             cccccchhhhhhhhhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChh
Q 018382          158 AAPLLCAGVTVFSPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDAT  236 (357)
Q Consensus       158 aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~  236 (357)
                      +|+++++++|||+++.+...+++|++|||+|+ |++|++++|+|+..|++|+++++++++.+.+++ +|+++++++++.+
T Consensus       141 aaal~~~~~ta~~al~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~-~Ga~~~~~~~~~~  219 (362)
T 2c0c_A          141 YLTLLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS-LGCDRPINYKTEP  219 (362)
T ss_dssp             HHTTTTHHHHHHHHHHHHTCCCTTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-TTCSEEEETTTSC
T ss_pred             hhcccchHHHHHHHHHHhcCCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH-cCCcEEEecCChh
Confidence            78899999999999988777799999999995 999999999999999999999999999888887 9999999887654


Q ss_pred             HHHH---hh-CCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCc-----------ccchHHHhhccceEEEEeec
Q 018382          237 RMQE---AA-DSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPM-----------QFLTPMVMLGRKAITGSFIG  301 (357)
Q Consensus       237 ~~~~---~~-~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-----------~~~~~~~~~~~~~i~g~~~~  301 (357)
                      ..+.   .. .++|+||||+|.. .+..++++++++|+++.+|......           .+ ...++.++.++.|++..
T Consensus       220 ~~~~~~~~~~~g~D~vid~~g~~-~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~g~~~~  297 (362)
T 2c0c_A          220 VGTVLKQEYPEGVDVVYESVGGA-MFDLAVDALATKGRLIVIGFISGYQTPTGLSPVKAGTL-PAKLLKKSASVQGFFLN  297 (362)
T ss_dssp             HHHHHHHHCTTCEEEEEECSCTH-HHHHHHHHEEEEEEEEECCCGGGTTSSSCCCCCCCTTH-HHHHHHHTCEEEECCGG
T ss_pred             HHHHHHHhcCCCCCEEEECCCHH-HHHHHHHHHhcCCEEEEEeCCCCcCccccccccccccc-HHHHHhhcceEEEEEhh
Confidence            4333   22 3799999999986 8899999999999999998754211           11 24567889999998764


Q ss_pred             C-----HHHHHHHHHHHHhcCCCccE---------EEeecccHHHHHHHHHcCCccEEEEEecC
Q 018382          302 S-----MKETKEMLEFCREKGVTSMI---------EVIKMDYVNKAFERLEKNDVRYRFVVDVA  351 (357)
Q Consensus       302 ~-----~~~~~~~~~~~~~~~l~~~i---------~~~~~~~~~~a~~~~~~~~~~Gkvvi~~~  351 (357)
                      .     .+.++++++++++|++++.+         +.|+++++++||+.+++++..||++++++
T Consensus       298 ~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~  361 (362)
T 2c0c_A          298 HYLSKYQAAMSHLLEMCVSGDLVCEVDLGDLSPEGRFTGLESIFRAVNYMYMGKNTGKIVVELP  361 (362)
T ss_dssp             GCGGGHHHHHHHHHHHHHTTCSCCCEECSTTSTTCSCBSTTHHHHHHHHHHTTCCSBEEEEECC
T ss_pred             hhhhhHHHHHHHHHHHHHCCCeEeeeccccccccccccCHHHHHHHHHHHHcCCCCceEEEEcC
Confidence            2     35789999999999998764         35799999999999999888899999875

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=100.00  E-value=3.1e-49  Score=363.08  Aligned_cols=311  Identities=19%  Similarity=0.247  Sum_probs=256.0

Q ss_pred             hhheeeehccCCC--CCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCC-CCCCCccCccccEEEEEeCCCCC
Q 018382            7 ERATIGWAAKDPS--GILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGM-SNYPMVPGHEVVGEVKEVGSEVS   83 (357)
Q Consensus         7 ~~~~~~~~~~~~~--~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~-~~~p~~lG~e~~G~V~~vG~~v~   83 (357)
                      |++|+++++.+.+  ..++++++|.|+|+++|||||++++++|++|++++.|..+. ..+|.++|||++|+|+++  +++
T Consensus         2 ~~~mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~E~~G~V~~~--~v~   79 (330)
T 1tt7_A            2 STLFQALQAEKNADDVSVHVKTISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGNIVREYPLILGIDAAGTVVSS--NDP   79 (330)
T ss_dssp             CCEEEEEEECCGGGSCCCEEEEEESSSSCSSSEEEEECCEEECHHHHHHTSTTCTTCSSCSEECCSEEEEEEEEC--SST
T ss_pred             CCcceEEEEecCCCCcceeEeecCCCCCCCCEEEEEEEEEecCHHHHhhhcCCCCCcCCCCccccceEEEEEEEc--CCC
Confidence            4567888775432  36889999999999999999999999999999999987552 357899999999999996  467


Q ss_pred             CCCCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccc
Q 018382           84 NFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLC  163 (357)
Q Consensus        84 ~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~  163 (357)
                      +|++||||++....                             .|...+|+|+||++++++.++++|+++++++||++++
T Consensus        80 ~~~vGdrV~~~~~~-----------------------------~g~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~  130 (330)
T 1tt7_A           80 RFAEGDEVIATSYE-----------------------------LGVSRDGGLSEYASVPGDWLVPLPQNLSLKEAMVYGT  130 (330)
T ss_dssp             TCCTTCEEEEESTT-----------------------------BTTTBCCSSBSSEEECGGGEEECCTTCCHHHHHHHHH
T ss_pred             CCCCCCEEEEcccc-----------------------------cCCCCCccceeEEEecHHHeEECCCCCCHHHHhhccc
Confidence            89999999754210                             0223579999999999999999999999999999999


Q ss_pred             hhhhhhhhhhcc--CCCCCCC-eEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChh--H
Q 018382          164 AGVTVFSPLSHF--GLKQSGL-RGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDAT--R  237 (357)
Q Consensus       164 ~~~ta~~~l~~~--~~~~~~~-~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~--~  237 (357)
                      ++.|||.++...  ..+++|+ +|||+|+ |++|++++|+|+..|++|+++++++++.+.+++ +|+++++|+++.+  .
T Consensus       131 ~~~ta~~~l~~~~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~-lGa~~v~~~~~~~~~~  209 (330)
T 1tt7_A          131 AGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQ-LGASEVISREDVYDGT  209 (330)
T ss_dssp             HHHHHHHHHHHHHHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHH-HTCSEEEEHHHHCSSC
T ss_pred             hHHHHHHHHHHHHhcCcCCCCceEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCCcEEEECCCchHHH
Confidence            999999887532  3458886 9999997 999999999999999999999999999888877 9999999865431  1


Q ss_pred             HHHhh-CCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCC-CcccchHHHhhccceEEEEee--cCH----HHHHHH
Q 018382          238 MQEAA-DSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINT-PMQFLTPMVMLGRKAITGSFI--GSM----KETKEM  309 (357)
Q Consensus       238 ~~~~~-~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~--~~~----~~~~~~  309 (357)
                      ++++. .++|++|||+|.. .+..++++++++|+++.+|...+ ...++...++.+++++.|++.  ...    +.++.+
T Consensus       210 ~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~  288 (330)
T 1tt7_A          210 LKALSKQQWQGAVDPVGGK-QLASLLSKIQYGGSVAVSGLTGGGEVPATVYPFILRGVSLLGIDSVYCPMDVRAAVWERM  288 (330)
T ss_dssp             CCSSCCCCEEEEEESCCTH-HHHHHHTTEEEEEEEEECCCSSCSCEEECSHHHHTSCCEEEECCSSSCCHHHHHHHHHHT
T ss_pred             HHHhhcCCccEEEECCcHH-HHHHHHHhhcCCCEEEEEecCCCCccCcchHHHHhcCeEEEEEeccccCHHHHHHHHHHH
Confidence            11222 3799999999996 89999999999999999987654 244555667889999999853  222    345566


Q ss_pred             HHHHHhcCCCccE-EEeecccHHHHHHHHHcCCccEEEEEec
Q 018382          310 LEFCREKGVTSMI-EVIKMDYVNKAFERLEKNDVRYRFVVDV  350 (357)
Q Consensus       310 ~~~~~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~  350 (357)
                      .+++.++.+++.+ ++|+++++++||+.+++++..||+++++
T Consensus       289 ~~~~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~  330 (330)
T 1tt7_A          289 SSDLKPDQLLTIVDREVSLEETPGALKDILQNRIQGRVIVKL  330 (330)
T ss_dssp             TTTSCCSCSTTSEEEEECSTTHHHHHHHTTTTCCSSEEEECC
T ss_pred             HHHHhcCCcccccceEEcHHHHHHHHHHHHcCCCCCeEEEeC
Confidence            6677778998888 9999999999999999998889999864

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=2.8e-48  Score=356.39  Aligned_cols=309  Identities=20%  Similarity=0.281  Sum_probs=249.9

Q ss_pred             heeeehccCCC--CCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCC-CCCCCccCccccEEEEEeCCCCCCC
Q 018382            9 ATIGWAAKDPS--GILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGM-SNYPMVPGHEVVGEVKEVGSEVSNF   85 (357)
Q Consensus         9 ~~~~~~~~~~~--~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~-~~~p~~lG~e~~G~V~~vG~~v~~~   85 (357)
                      +|+++++.+.+  ..++++++|.|+|+++|||||+.++++|++|++++.|..+. ..+|.++|||++|+|+++  ++++|
T Consensus         3 ~mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~~--~v~~~   80 (328)
T 1xa0_A            3 AFQAFVVNKTETEFTAGVQTISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGKIVKTYPFVPGIDLAGVVVSS--QHPRF   80 (328)
T ss_dssp             EEEEEEEEEETTEEEEEEEEEEGGGSCSCSEEEEEEEEECCHHHHHHTSGGGSSCCSSSBCCCSEEEEEEEEC--CSSSC
T ss_pred             cceEEEEecCCCcceeEEEeccCCCCCCCeEEEEEEEEecCHHHHHhhcCCCCCCCCCCcccCcceEEEEEec--CCCCC
Confidence            46777765322  36788999999999999999999999999999999886542 357899999999999995  56889


Q ss_pred             CCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchh
Q 018382           86 KVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAG  165 (357)
Q Consensus        86 ~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~  165 (357)
                      ++||||++...                             ..|...+|+|+||++++++.++++|+++++++||++++++
T Consensus        81 ~vGdrV~~~~~-----------------------------~~g~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa~~~~~~  131 (328)
T 1xa0_A           81 REGDEVIATGY-----------------------------EIGVTHFGGYSEYARLHGEWLVPLPKGLTLKEAMAIGTAG  131 (328)
T ss_dssp             CTTCEEEEEST-----------------------------TBTTTBCCSSBSEEEECGGGCEECCTTCCHHHHHHHHHHH
T ss_pred             CCCCEEEEccc-----------------------------cCCCCCCccceeEEEechHHeEECCCCCCHHHhhhhhhhH
Confidence            99999975421                             0022357999999999999999999999999999999999


Q ss_pred             hhhhhhhhcc--CCCCCCC-eEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChh--HHH
Q 018382          166 VTVFSPLSHF--GLKQSGL-RGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDAT--RMQ  239 (357)
Q Consensus       166 ~ta~~~l~~~--~~~~~~~-~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~--~~~  239 (357)
                      .|||.++...  ..+++|+ +|||+|+ |++|++++|+|+..|++|+++++++++.+.+++ +|+++++|+++.+  .++
T Consensus       132 ~ta~~~l~~~~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~-lGa~~~i~~~~~~~~~~~  210 (328)
T 1xa0_A          132 FTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRV-LGAKEVLAREDVMAERIR  210 (328)
T ss_dssp             HHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHH-TTCSEEEECC--------
T ss_pred             HHHHHHHHHHhhcCCCCCCceEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-cCCcEEEecCCcHHHHHH
Confidence            9999887532  3458886 9999997 999999999999999999999999999888887 9999999887642  233


Q ss_pred             Hhh-CCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCC-CcccchHHHhhccceEEEEee--cCH----HHHHHHHH
Q 018382          240 EAA-DSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINT-PMQFLTPMVMLGRKAITGSFI--GSM----KETKEMLE  311 (357)
Q Consensus       240 ~~~-~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~--~~~----~~~~~~~~  311 (357)
                      ++. .++|+|||++|.. .+..++++++++|+++.+|...+ ...++...++.+++++.|+..  ...    +.++.+.+
T Consensus       211 ~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~  289 (328)
T 1xa0_A          211 PLDKQRWAAAVDPVGGR-TLATVLSRMRYGGAVAVSGLTGGAEVPTTVHPFILRGVSLLGIDSVYCPMDLRLRIWERLAG  289 (328)
T ss_dssp             -CCSCCEEEEEECSTTT-THHHHHHTEEEEEEEEECSCCSSSCCCCCSHHHHHTTCEEEECCSSSCCHHHHHHHHHHHHT
T ss_pred             HhcCCcccEEEECCcHH-HHHHHHHhhccCCEEEEEeecCCCCCCCchhhhhhcCceEEEEecccCCHHHHHHHHHHHHH
Confidence            333 3799999999996 89999999999999999987654 234555667789999999743  222    23455555


Q ss_pred             HHHhcCCCccEEEeecccHHHHHHHHHcCCccEEEEEecC
Q 018382          312 FCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVA  351 (357)
Q Consensus       312 ~~~~~~l~~~i~~~~~~~~~~a~~~~~~~~~~Gkvvi~~~  351 (357)
                      ++.++ +++..++|+++++++||+.+++++..||++++++
T Consensus       290 ~~~~g-l~~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~  328 (328)
T 1xa0_A          290 DLKPD-LERIAQEISLAELPQALKRILRGELRGRTVVRLA  328 (328)
T ss_dssp             TTCCC-HHHHEEEEEGGGHHHHHHHHHHTCCCSEEEEECC
T ss_pred             HHHcC-CceeeeEeCHHHHHHHHHHHHcCCCCCeEEEEeC
Confidence            55566 6554599999999999999999988899999873

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=100.00  E-value=5.2e-49  Score=367.68  Aligned_cols=307  Identities=13%  Similarity=0.103  Sum_probs=254.4

Q ss_pred             hhhheeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCC--------------------------
Q 018382            6 TERATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLG--------------------------   59 (357)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~--------------------------   59 (357)
                      .+++|+++....++..++++++|.|+|+++||||||+++++|++|++++.|.++                          
T Consensus         4 ~~~~mka~v~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~g~~~~p~~~~~~p~~~~~~   83 (379)
T 3iup_A            4 SALQLRSRIKSSGELELSLDSIDTPHPGPDEVLIRIEASPLNPSDLGLLFGAADMSTAKASGTAERPIVTARVPEGAMRS   83 (379)
T ss_dssp             EEEEEEEEECTTSEEEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTTCEEEEEEEEECSSSEEEEEECCHHHHHH
T ss_pred             chhhHHHHHhcCCCCceEEEeccCCCCCCCEEEEEEEEEecCHHHHHHhcCCccccccccccccccccccccCccccccc
Confidence            367888888765666799999999999999999999999999999999988521                          


Q ss_pred             ---CCCCCCccCccccEEEEEeCCCC-CCCCCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCcc
Q 018382           60 ---MSNYPMVPGHEVVGEVKEVGSEV-SNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGF  135 (357)
Q Consensus        60 ---~~~~p~~lG~e~~G~V~~vG~~v-~~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~  135 (357)
                         ...+|.++|||++|+|+++|++| ++|++||||++.                                    .+|+|
T Consensus        84 ~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~vGdrV~~~------------------------------------~~G~~  127 (379)
T 3iup_A           84 MAGRLDASMPVGNEGAGVVVEAGSSPAAQALMGKTVAAI------------------------------------GGAMY  127 (379)
T ss_dssp             HGGGTTEEEECCSCEEEEEEEECSSHHHHTTTTCEEEEC------------------------------------CSCCS
T ss_pred             cccccCCCccceeeeEEEEEEeCCCcccCCCCCCEEEec------------------------------------CCCcc
Confidence               23568899999999999999999 889999999753                                    36999


Q ss_pred             ceEEEeeCcceEECCCCCCccccccccchhhhhhhhhhccCCCCCCCeEEEE--ecChHHHHHHHHHHHcCCeEEEEeCC
Q 018382          136 AESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGIL--GLGGVGHMGVLIAKAMGHHVTVISSS  213 (357)
Q Consensus       136 ~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~--G~g~~G~~ai~la~~~g~~V~~~~~~  213 (357)
                      +||++++++.++++|+++++++||++++.++|||+++....  ++|++|||+  |+|++|++++|+|+..|++|++++++
T Consensus       128 aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~--~~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~  205 (379)
T 3iup_A          128 SQYRCIPADQCLVLPEGATPADGASSFVNPLTALGMVETMR--LEGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRK  205 (379)
T ss_dssp             BSEEEEEGGGEEECCTTCCHHHHTTSSHHHHHHHHHHHHHH--HTTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESS
T ss_pred             eeEEEeCHHHeEECCCCCCHHHHHhhhhhHHHHHHHHHHhc--cCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence            99999999999999999999999999999999998877655  899999999  45999999999999999999999999


Q ss_pred             cHHHHHHHHhcCCcEEEcCCChhHHHHh---hC--CccEEEEcCCCCCChHHHHhccc-----cC-----------CeEE
Q 018382          214 DKKRVEAMEHLGADQYLVSSDATRMQEA---AD--SLDYIIDTVPANHPLEPYLSLLK-----LD-----------GKLI  272 (357)
Q Consensus       214 ~~~~~~~~~~~g~~~vv~~~~~~~~~~~---~~--~~d~v~d~~g~~~~~~~~~~~l~-----~~-----------G~~v  272 (357)
                      +++.+.+++ +|+++++|+++.++.+++   +.  ++|+||||+|+......++++++     ++           |+++
T Consensus       206 ~~~~~~~~~-lGa~~~~~~~~~~~~~~v~~~t~~~g~d~v~d~~g~~~~~~~~~~~l~~~~~r~~G~~~~~G~~~~g~iv  284 (379)
T 3iup_A          206 QEQADLLKA-QGAVHVCNAASPTFMQDLTEALVSTGATIAFDATGGGKLGGQILTCMEAALNKSAREYSRYGSTTHKQVY  284 (379)
T ss_dssp             HHHHHHHHH-TTCSCEEETTSTTHHHHHHHHHHHHCCCEEEESCEEESHHHHHHHHHHHHHHTTCCSCCTTCCCSCEEEE
T ss_pred             HHHHHHHHh-CCCcEEEeCCChHHHHHHHHHhcCCCceEEEECCCchhhHHHHHHhcchhhhccccceeecccccCceEE
Confidence            999998888 999999999876654443   32  79999999998756678888885     45           4444


Q ss_pred             EEccCCCCcccchHHHhhccceEEEEeecCH------H----HHHHHHHHHHhcCCCccE-EEeecccH--HHHHHHHHc
Q 018382          273 LTGVINTPMQFLTPMVMLGRKAITGSFIGSM------K----ETKEMLEFCREKGVTSMI-EVIKMDYV--NKAFERLEK  339 (357)
Q Consensus       273 ~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~------~----~~~~~~~~~~~~~l~~~i-~~~~~~~~--~~a~~~~~~  339 (357)
                      .+|.... ..++...++.+++++.|++...+      +    .++.+++++.+ .+++.+ ++|+++++  ++||+.+.+
T Consensus       285 ~~G~~~~-~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~i~~~~~l~~~~~~~A~~~l~~  362 (379)
T 3iup_A          285 LYGGLDT-SPTEFNRNFGMAWGMGGWLLFPFLQKIGRERANALKQRVVAELKT-TFASHYSKEISLAEVLDLDMIAVYNK  362 (379)
T ss_dssp             ECCCSEE-EEEEECCCSCSCEEEEECCHHHHHHHHCHHHHHHHHHHHHHTTTT-TTCCCCSEEEEHHHHTCHHHHHHHTT
T ss_pred             EecCCCC-CccccccccccceEEEEEEeeeecccCCHHHHHHHHHHHHHHHhc-cCCCcceEEecHHHhhhHHHHHHHhc
Confidence            4444321 12233345678889999876432      2    23555566666 588888 99999999  999999999


Q ss_pred             CCccEEEEEecCCC
Q 018382          340 NDVRYRFVVDVAGS  353 (357)
Q Consensus       340 ~~~~Gkvvi~~~~~  353 (357)
                      ++..||+||+++..
T Consensus       363 ~~~~gKvVv~~~~g  376 (379)
T 3iup_A          363 RATGEKYLINPNKG  376 (379)
T ss_dssp             CCTTCCEEEETTTT
T ss_pred             CCCCceEEEeCCCC
Confidence            99999999999753

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=100.00  E-value=2.8e-47  Score=345.70  Aligned_cols=290  Identities=23%  Similarity=0.317  Sum_probs=248.9

Q ss_pred             eeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCC-CCCCCccCccccEEEEEeCCCCCCCCCC
Q 018382           10 TIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGM-SNYPMVPGHEVVGEVKEVGSEVSNFKVG   88 (357)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~-~~~p~~lG~e~~G~V~~vG~~v~~~~~G   88 (357)
                      |+++.+...+++..++++|.|+|+++|||||++++++|++|++++.|.++. ..+|.++|||++|+|+           |
T Consensus         1 Mka~~~~~~g~~~~l~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~e~~G~V~-----------G   69 (302)
T 1iz0_A            1 MKAWVLKRLGGPLELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFIPGMEVVGVVE-----------G   69 (302)
T ss_dssp             CEEEEECSTTSCEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCCEEEEEET-----------T
T ss_pred             CeEEEEcCCCCchheEECCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCcccceEEEEEE-----------C
Confidence            456666543334346689999999999999999999999999999997653 3678999999999998           9


Q ss_pred             CEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhhh
Q 018382           89 DKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTV  168 (357)
Q Consensus        89 d~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta  168 (357)
                      |||++.                                   ..+|+|+||++++++.++++|+++++++||++++++.||
T Consensus        70 drV~~~-----------------------------------~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta  114 (302)
T 1iz0_A           70 RRYAAL-----------------------------------VPQGGLAERVAVPKGALLPLPEGLSPEEAAAFPVSFLTA  114 (302)
T ss_dssp             EEEEEE-----------------------------------CSSCCSBSEEEEEGGGCEECCTTCCHHHHHTSHHHHHHH
T ss_pred             cEEEEe-----------------------------------cCCcceeeEEEEcHHHcEeCCCCCCHHHHHHhhhHHHHH
Confidence            999754                                   146999999999999999999999999999999999999


Q ss_pred             hhhhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCC-hhHHHHhhCCcc
Q 018382          169 FSPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSD-ATRMQEAADSLD  246 (357)
Q Consensus       169 ~~~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~-~~~~~~~~~~~d  246 (357)
                      |+++.... +++|++|||+|+ |++|++++|+|+..|++|+++++++++.+.+++ +|+++++|+++ .+..+.+ +++|
T Consensus       115 ~~~l~~~~-~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-~ga~~~~~~~~~~~~~~~~-~~~d  191 (302)
T 1iz0_A          115 YLALKRAQ-ARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLA-LGAEEAATYAEVPERAKAW-GGLD  191 (302)
T ss_dssp             HHHHHHTT-CCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHH-TTCSEEEEGGGHHHHHHHT-TSEE
T ss_pred             HHHHHHhc-CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh-cCCCEEEECCcchhHHHHh-cCce
Confidence            99998666 799999999997 999999999999999999999999999888877 99999999876 6655555 7899


Q ss_pred             EEEEcCCCCCChHHHHhccccCCeEEEEccCCCC-cccchHHHhhccceEEEEeec----CHHHHHHHHH---HHHhcCC
Q 018382          247 YIIDTVPANHPLEPYLSLLKLDGKLILTGVINTP-MQFLTPMVMLGRKAITGSFIG----SMKETKEMLE---FCREKGV  318 (357)
Q Consensus       247 ~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~----~~~~~~~~~~---~~~~~~l  318 (357)
                      ++|| +|.. .+..++++++++|+++.+|..... ..++...++.+++++.++...    ..+.++++++   ++.++++
T Consensus       192 ~vid-~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~g~l  269 (302)
T 1iz0_A          192 LVLE-VRGK-EVEESLGLLAHGGRLVYIGAAEGEVAPIPPLRLMRRNLAVLGFWLTPLLREGALVEEALGFLLPRLGREL  269 (302)
T ss_dssp             EEEE-CSCT-THHHHHTTEEEEEEEEEC-------CCCCTTHHHHTTCEEEECCHHHHTTCHHHHHHHHHHHGGGBTTTB
T ss_pred             EEEE-CCHH-HHHHHHHhhccCCEEEEEeCCCCCCCCcCHHHHHhCCCeEEEEeccchhhhHHHHHHHHhhhHHHHcCCc
Confidence            9999 9985 899999999999999999876543 245566677899999998753    4567899999   9999999


Q ss_pred             CccE-EEeecccHHHHHHHHHcCCccEEEEEec
Q 018382          319 TSMI-EVIKMDYVNKAFERLEKNDVRYRFVVDV  350 (357)
Q Consensus       319 ~~~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~  350 (357)
                      ++.+ ++|+++++++||+.+++++..||+++++
T Consensus       270 ~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  302 (302)
T 1iz0_A          270 RPVVGPVFPFAEAEAAFRALLDRGHTGKVVVRL  302 (302)
T ss_dssp             CCCEEEEEEGGGHHHHHHHTTCTTCCBEEEEEC
T ss_pred             ccccceEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence            9988 9999999999999999988889999864

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=100.00  E-value=6.6e-47  Score=351.20  Aligned_cols=308  Identities=14%  Similarity=0.143  Sum_probs=259.3

Q ss_pred             hhhhheeeehc-cCC-----C--CCcceeeeecCCC-CCCcEEEEEeeeccccchHHHHhc----CCC-CCCCCCccCcc
Q 018382            5 DTERATIGWAA-KDP-----S--GILSPYTYTLRNT-GAEDVYIKVLYCGICHTDIHQIKN----DLG-MSNYPMVPGHE   70 (357)
Q Consensus         5 ~~~~~~~~~~~-~~~-----~--~~~~~~~~~~p~~-~~~evlV~v~~~~~~~~D~~~~~g----~~~-~~~~p~~lG~e   70 (357)
                      .+|++|+++++ ...     +  +.++++++|.|+| +++||||||.++++|++|++.+.+    .++ ...+|.++|||
T Consensus         4 ~~~~~mka~v~~~~~~~~g~p~~~~l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~~~~g~~~~~~~~~p~v~G~E   83 (357)
T 2zb4_A            4 AAAMIVQRVVLNSRPGKNGNPVAENFRMEEVYLPDNINEGQVQVRTLYLSVDPYMRCRMNEDTGTDYITPWQLSQVVDGG   83 (357)
T ss_dssp             --CCEEEEEEECCCCCTTSCCCGGGEEEEEEECCSCCCTTEEEEEEEEEECCTTHHHHTSSSCSSSSSCCCCBTSBCEEE
T ss_pred             cccccceEEEEeccCCCCCCCCcCceEEEeecCCCCCCCCeEEEEEEEEecCHHHHhhccccccccccCCCCCCcccccc
Confidence            45778888888 322     2  5688999999999 999999999999999999988775    232 23568899999


Q ss_pred             ccEEEEEeCCCCCCCCCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECC
Q 018382           71 VVGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIP  150 (357)
Q Consensus        71 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP  150 (357)
                      ++|+|++  +++++|++||||++.                                     .|+|+||++++++.++++|
T Consensus        84 ~~G~V~~--~~v~~~~vGdrV~~~-------------------------------------~G~~aey~~v~~~~~~~iP  124 (357)
T 2zb4_A           84 GIGIIEE--SKHTNLTKGDFVTSF-------------------------------------YWPWQTKVILDGNSLEKVD  124 (357)
T ss_dssp             EEEEEEE--ECSTTCCTTCEEEEE-------------------------------------EEESBSEEEEEGGGCEECC
T ss_pred             EEEEEEe--cCCCCCCCCCEEEec-------------------------------------CCCcEEEEEEchHHceecC
Confidence            9999999  889999999999742                                     4889999999999999999


Q ss_pred             CCC-----CccccccccchhhhhhhhhhccCCCCCC--CeEEEEec-ChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHH
Q 018382          151 DGM-----ALEQAAPLLCAGVTVFSPLSHFGLKQSG--LRGGILGL-GGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAM  221 (357)
Q Consensus       151 ~~l-----~~~~aa~~~~~~~ta~~~l~~~~~~~~~--~~VlI~G~-g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~  221 (357)
                      +++     +++ +|+++++++|||+++.+...+++|  ++|||+|+ |++|++++|+++..|+ +|+++++++++.+.++
T Consensus       125 ~~~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~  203 (357)
T 2zb4_A          125 PQLVDGHLSYF-LGAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLT  203 (357)
T ss_dssp             GGGGTTCGGGG-GTTTSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH
T ss_pred             cccccCchhHH-HHhcccHHHHHHHHHHHhcCCCCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHH
Confidence            999     555 788999999999999766677999  99999997 9999999999999999 9999999988888887


Q ss_pred             HhcCCcEEEcCCChhHHHH---hhC-CccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCC-cccc---------hHH
Q 018382          222 EHLGADQYLVSSDATRMQE---AAD-SLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTP-MQFL---------TPM  287 (357)
Q Consensus       222 ~~~g~~~vv~~~~~~~~~~---~~~-~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~---------~~~  287 (357)
                      +++|+++++|.++.+..+.   ... ++|++||++|.. .+..++++++++|+++.+|..... ..++         ...
T Consensus       204 ~~~g~~~~~d~~~~~~~~~~~~~~~~~~d~vi~~~G~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~  282 (357)
T 2zb4_A          204 SELGFDAAINYKKDNVAEQLRESCPAGVDVYFDNVGGN-ISDTVISQMNENSHIILCGQISQYNKDVPYPPPLSPAIEAI  282 (357)
T ss_dssp             HTSCCSEEEETTTSCHHHHHHHHCTTCEEEEEESCCHH-HHHHHHHTEEEEEEEEECCCGGGTTSCCCSSCCCCHHHHHH
T ss_pred             HHcCCceEEecCchHHHHHHHHhcCCCCCEEEECCCHH-HHHHHHHHhccCcEEEEECCccccccCccccccchhhhhhh
Confidence            6699999998876544333   333 799999999985 889999999999999999875431 1222         145


Q ss_pred             HhhccceEEEEeecC-----HHHHHHHHHHHHhcCCCccE-EEeecccHHHHHHHHHcCCccEEEEEecCCC
Q 018382          288 VMLGRKAITGSFIGS-----MKETKEMLEFCREKGVTSMI-EVIKMDYVNKAFERLEKNDVRYRFVVDVAGS  353 (357)
Q Consensus       288 ~~~~~~~i~g~~~~~-----~~~~~~~~~~~~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~~~~  353 (357)
                      ++.+++++.++....     .+.++++++++.+|++++.+ .+|+++++++||+.+++++..||+|++++++
T Consensus       283 ~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvi~~~~~  354 (357)
T 2zb4_A          283 QKERNITRERFLVLNYKDKFEPGILQLSQWFKEGKLKIKETVINGLENMGAAFQSMMTGGNIGKQIVCISEE  354 (357)
T ss_dssp             HHHHTCEEEECCGGGGGGGHHHHHHHHHHHHHTTCCCCCEEEEECGGGHHHHHHHHHTTCCSBEEEEECCCC
T ss_pred             hhcceeEEEEeehhhhhHHHHHHHHHHHHHHHcCCCcCccceecCHHHHHHHHHHHHcCCCCceEEEEEecc
Confidence            678899999987644     46789999999999999876 8899999999999999998889999999654

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=100.00  E-value=3.8e-45  Score=368.91  Aligned_cols=293  Identities=18%  Similarity=0.189  Sum_probs=249.1

Q ss_pred             cCCCCCcceeeeec--CCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCCCCEEEE
Q 018382           16 KDPSGILSPYTYTL--RNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGV   93 (357)
Q Consensus        16 ~~~~~~~~~~~~~~--p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~   93 (357)
                      ++.+..+++++.+.  |+|+++||+|||+++|+|++|++++.|.++   .|.++|||++|+|+++|++|++|++||||+.
T Consensus       218 ~G~~~~L~~~~~~~p~~~~~~~eVlV~V~a~gin~~D~~~~~G~~~---~~~~lG~E~aG~V~~vG~~V~~~~vGDrV~~  294 (795)
T 3slk_A          218 PGSLDGLALVDEPTATAPLGDGEVRIAMRAAGVNFRDALIALGMYP---GVASLGSEGAGVVVETGPGVTGLAPGDRVMG  294 (795)
T ss_dssp             TTSSTTEEECCCHHHHSCCCSSEEEEEEEEEEECHHHHHHTTTCCS---SCCCSCCCEEEEEEEECSSCCSSCTTCEEEE
T ss_pred             CCCccceEEEeCCccCCCCCCCEEEEEEEEEccCHHHHHHHcCCCC---CCccccceeEEEEEEeCCCCCcCCCCCEEEE
Confidence            44556677777664  678999999999999999999999998764   3557999999999999999999999999975


Q ss_pred             ccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhhhhhhhh
Q 018382           94 GVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLS  173 (357)
Q Consensus        94 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~  173 (357)
                      .                                    ..|+|+||++++++.++++|+++++++||++++.++|||+++.
T Consensus       295 ~------------------------------------~~G~~ae~~~v~~~~~~~iP~~ls~~~AA~l~~~~~Ta~~al~  338 (795)
T 3slk_A          295 M------------------------------------IPKAFGPLAVADHRMVTRIPAGWSFARAASVPIVFLTAYYALV  338 (795)
T ss_dssp             C------------------------------------CSSCSSSEEEEETTSEEECCTTCCHHHHHHHHHHHHHHHCCCC
T ss_pred             E------------------------------------ecCCCcCEEEeehHHEEECCCCCCHHHHHhhhHHHHHHHHHHH
Confidence            3                                    4699999999999999999999999999999999999999998


Q ss_pred             ccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHh---hC--CccE
Q 018382          174 HFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEA---AD--SLDY  247 (357)
Q Consensus       174 ~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~---~~--~~d~  247 (357)
                      +...+++|++|||+|+ |++|++++|+||..|++|+++++++ +.+.+ + +|+++++++++.++.+.+   ++  ++|+
T Consensus       339 ~~a~l~~G~~VLI~gaaGgvG~~aiqlAk~~Ga~V~~t~~~~-k~~~l-~-lga~~v~~~~~~~~~~~i~~~t~g~GvDv  415 (795)
T 3slk_A          339 DLAGLRPGESLLVHSAAGGVGMAAIQLARHLGAEVYATASED-KWQAV-E-LSREHLASSRTCDFEQQFLGATGGRGVDV  415 (795)
T ss_dssp             CCTCCCTTCCEEEESTTBHHHHHHHHHHHHTTCCEEEECCGG-GGGGS-C-SCGGGEECSSSSTHHHHHHHHSCSSCCSE
T ss_pred             HHhCCCCCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeChH-Hhhhh-h-cChhheeecCChhHHHHHHHHcCCCCeEE
Confidence            8888899999999986 9999999999999999999999765 44433 3 899999998886654443   33  7999


Q ss_pred             EEEcCCCCCChHHHHhccccCCeEEEEccCCCCcccchHHHhhccceEEEEeecC------HHHHHHHHHHHHhcCCCcc
Q 018382          248 IIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGS------MKETKEMLEFCREKGVTSM  321 (357)
Q Consensus       248 v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~------~~~~~~~~~~~~~~~l~~~  321 (357)
                      |||++++. .++.++++++++|+++.+|........... ...++.++.+.....      .+.++++++++++|.+++.
T Consensus       416 Vld~~gg~-~~~~~l~~l~~~Gr~v~iG~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~l~~~g~l~p~  493 (795)
T 3slk_A          416 VLNSLAGE-FADASLRMLPRGGRFLELGKTDVRDPVEVA-DAHPGVSYQAFDTVEAGPQRIGEMLHELVELFEGRVLEPL  493 (795)
T ss_dssp             EEECCCTT-TTHHHHTSCTTCEEEEECCSTTCCCHHHHH-HHSSSEEEEECCGGGGHHHHHHHHHHHHHHHHHTTSCCCC
T ss_pred             EEECCCcH-HHHHHHHHhcCCCEEEEeccccccCccccc-ccCCCCEEEEeeccccCHHHHHHHHHHHHHHHHcCCcCCC
Confidence            99999987 889999999999999999876543322222 223666666655421      2567899999999999997


Q ss_pred             E-EEeecccHHHHHHHHHcCCccEEEEEecCC
Q 018382          322 I-EVIKMDYVNKAFERLEKNDVRYRFVVDVAG  352 (357)
Q Consensus       322 i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~~~  352 (357)
                      + ++|+++++++||+.+++++..||+|+++..
T Consensus       494 ~~~~~~l~~~~eA~~~l~~g~~~GKvVl~~~~  525 (795)
T 3slk_A          494 PVTAWDVRQAPEALRHLSQARHVGKLVLTMPP  525 (795)
T ss_dssp             CEEEEEGGGHHHHHHHHHHTCCCBEEEEECCC
T ss_pred             cceeEcHHHHHHHHHHHhcCCccceEEEecCc
Confidence            6 999999999999999999999999999865

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=100.00  E-value=1.8e-43  Score=325.16  Aligned_cols=299  Identities=19%  Similarity=0.173  Sum_probs=249.1

Q ss_pred             hhhheeeehccCC------CCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeC
Q 018382            6 TERATIGWAAKDP------SGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVG   79 (357)
Q Consensus         6 ~~~~~~~~~~~~~------~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG   79 (357)
                      .+++|++|.+...      ++.++++++|.|+|+++||||||.++++|+.|+.. ..   ...+|.++|||++|+|++. 
T Consensus         4 ~~~~mka~~~~~~~~g~~~~~~l~~~e~~~P~~~~~eVlVkv~a~gi~~~~~~~-~~---~~~~p~~~g~e~~G~Vv~~-   78 (333)
T 1v3u_A            4 FMVKAKSWTLKKHFQGKPTQSDFELKTVELPPLKNGEVLLEALFLSVDPYMRIA-SK---RLKEGAVMMGQQVARVVES-   78 (333)
T ss_dssp             CCCEEEEEEECC-----CCGGGEEEEEEECCCCCTTCEEEEEEEEECCTHHHHH-TT---TCCTTSBCCCCEEEEEEEE-
T ss_pred             ccccccEEEEeecCCCCCCccceEEEeCCCCCCCCCEEEEEEEEeccCHHHccc-cC---cCCCCcccccceEEEEEec-
Confidence            3567888887542      25688889999999999999999999999998732 21   2356788999999999995 


Q ss_pred             CCCCCCCCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCC----CCc
Q 018382           80 SEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDG----MAL  155 (357)
Q Consensus        80 ~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~----l~~  155 (357)
                       ++++|++||||++                                      .|+|+||++++++.++++|++    +++
T Consensus        79 -~v~~~~vGdrV~~--------------------------------------~g~~aey~~v~~~~~~~iP~~~~~~~~~  119 (333)
T 1v3u_A           79 -KNSAFPAGSIVLA--------------------------------------QSGWTTHFISDGKGLEKLLTEWPDKLPL  119 (333)
T ss_dssp             -SCTTSCTTCEEEE--------------------------------------CCCSBSEEEESSTTEEECC--CCTTSCG
T ss_pred             -CCCCCCCCCEEEe--------------------------------------cCceEEEEEechHHeEEcCcccccCCCH
Confidence             6789999999963                                      378999999999999999997    888


Q ss_pred             cc-cccccchhhhhhhhhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCC
Q 018382          156 EQ-AAPLLCAGVTVFSPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSS  233 (357)
Q Consensus       156 ~~-aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~  233 (357)
                      ++ +|+++++++|||+++.+...+++|++|||+|+ |++|++++|+++..|++|+++++++++.+.+++ +|+++++|.+
T Consensus       120 ~~a~a~l~~~~~ta~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~-~g~~~~~d~~  198 (333)
T 1v3u_A          120 SLALGTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQ-IGFDAAFNYK  198 (333)
T ss_dssp             GGGGTTTSHHHHHHHHHHHTTSCCCSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-TTCSEEEETT
T ss_pred             HHHHHHhCChHHHHHHHHHHhhCCCCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh-cCCcEEEecC
Confidence            88 58999999999999977777799999999997 999999999999999999999999988888855 9999999887


Q ss_pred             C-hhH---HHHhh-CCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCC------c-ccchHHHhhccceEEEEeec
Q 018382          234 D-ATR---MQEAA-DSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTP------M-QFLTPMVMLGRKAITGSFIG  301 (357)
Q Consensus       234 ~-~~~---~~~~~-~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~------~-~~~~~~~~~~~~~i~g~~~~  301 (357)
                      + .+.   +.+.. +++|++||++|.. .+..++++++++|+++.+|.....      . ..+...++.+++++.|+..+
T Consensus       199 ~~~~~~~~~~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~  277 (333)
T 1v3u_A          199 TVNSLEEALKKASPDGYDCYFDNVGGE-FLNTVLSQMKDFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVY  277 (333)
T ss_dssp             SCSCHHHHHHHHCTTCEEEEEESSCHH-HHHHHHTTEEEEEEEEECCCCC-------CCBCCCHHHHHHTTCEEEECCGG
T ss_pred             CHHHHHHHHHHHhCCCCeEEEECCChH-HHHHHHHHHhcCCEEEEEeccccccCCCCCCCCcCHHHHhhcCceEEEEehh
Confidence            6 433   33333 3799999999986 788999999999999999875431      1 13455678899999998764


Q ss_pred             C------HHHHHHHHHHHHhcCCCccE-EEeecccHHHHHHHHHcCCccEEEEEec
Q 018382          302 S------MKETKEMLEFCREKGVTSMI-EVIKMDYVNKAFERLEKNDVRYRFVVDV  350 (357)
Q Consensus       302 ~------~~~~~~~~~~~~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~  350 (357)
                      .      .+.++++++++.+|++++.+ .+|+++++++||+.+++++..||+++++
T Consensus       278 ~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  333 (333)
T 1v3u_A          278 RWQGDVREKALRDLMKWVLEGKIQYHEHVTKGFENMPAAFIEMLNGANLGKAVVTA  333 (333)
T ss_dssp             GCCTHHHHHHHHHHHHHHHTTSSCCCEEEEECGGGHHHHHHHHHTTCCSBEEEEEC
T ss_pred             hcchHHHHHHHHHHHHHHHCCCccCccccccCHHHHHHHHHHHHcCCCCceEEEeC
Confidence            3      35678899999999999876 7789999999999999998889999874

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=100.00  E-value=8.5e-44  Score=328.88  Aligned_cols=304  Identities=19%  Similarity=0.163  Sum_probs=249.4

Q ss_pred             hheeeehcc----CCCC--Cccee--eeecCC-CCCCcEEEEEeeeccccchHHHHhcCCCC----CCCCCccCccccEE
Q 018382            8 RATIGWAAK----DPSG--ILSPY--TYTLRN-TGAEDVYIKVLYCGICHTDIHQIKNDLGM----SNYPMVPGHEVVGE   74 (357)
Q Consensus         8 ~~~~~~~~~----~~~~--~~~~~--~~~~p~-~~~~evlV~v~~~~~~~~D~~~~~g~~~~----~~~p~~lG~e~~G~   74 (357)
                      ++|+++.+.    ++++  .++++  +++.|. |+++||||||.++++|+.|+ ...|....    ..+|.++|||++|+
T Consensus         3 ~~mka~~m~a~~~~~p~~~~l~~~~~~~~~P~~~~~~eVlVkv~a~g~~~~~~-~~~g~~~~~~~~~~~p~v~G~e~~G~   81 (345)
T 2j3h_A            3 ATNKQVILKDYVSGFPTESDFDFTTTTVELRVPEGTNSVLVKNLYLSCDPYMR-IRMGKPDPSTAALAQAYTPGQPIQGY   81 (345)
T ss_dssp             EEEEEEEECSCBSSSCCGGGEEEEEEEEECCSCSSSSCEEEEECEEECCTTHH-HHHBC---------CCCCTTSBCEEE
T ss_pred             ccceEEEEecCCCCCCCccceeEEEeecCCCCCCCCCEEEEEEEEecCCHHHH-hhcccCCCCccccCCCcCCCCeeecc
Confidence            345555432    3455  58887  888887 89999999999999999885 45565421    24688999999999


Q ss_pred             EEE--eCCCCCCCCCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcc--eEECC
Q 018382           75 VKE--VGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKF--VVKIP  150 (357)
Q Consensus        75 V~~--vG~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~--~~~lP  150 (357)
                      +++  +|+++++|++||||++                                      .|+|+||++++++.  ++++|
T Consensus        82 ~~~GvV~~~v~~~~vGdrV~~--------------------------------------~g~~aey~~v~~~~~~~~~ip  123 (345)
T 2j3h_A           82 GVSRIIESGHPDYKKGDLLWG--------------------------------------IVAWEEYSVITPMTHAHFKIQ  123 (345)
T ss_dssp             EEEEEEEECSTTCCTTCEEEE--------------------------------------EEESBSEEEECCCTTTCEEEC
T ss_pred             eEEEEEecCCCCCCCCCEEEe--------------------------------------ecCceeEEEecccccceeecC
Confidence            999  9999999999999963                                      37899999999876  99999


Q ss_pred             C---CCCccccccccchhhhhhhhhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCC
Q 018382          151 D---GMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGA  226 (357)
Q Consensus       151 ~---~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~  226 (357)
                      +   +++++ +|+++++++|||+++.+...+++|++|||+|+ |++|++++|+++..|++|+++++++++.+.+++++|+
T Consensus       124 ~~~~~~~~~-aa~l~~~~~ta~~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~g~  202 (345)
T 2j3h_A          124 HTDVPLSYY-TGLLGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGF  202 (345)
T ss_dssp             CCSSCTTGG-GTTTSHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTSCC
T ss_pred             CCCCCHHHH-HHhccccHHHHHHHHHHHhCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCC
Confidence            6   45665 67899999999999977777799999999997 9999999999999999999999999998888745999


Q ss_pred             cEEEcCCCh-h---HHHHhh-CCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCC------CcccchHHHhhccceE
Q 018382          227 DQYLVSSDA-T---RMQEAA-DSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINT------PMQFLTPMVMLGRKAI  295 (357)
Q Consensus       227 ~~vv~~~~~-~---~~~~~~-~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~i  295 (357)
                      ++++|+++. +   .+.++. +++|++||++|.. .+..++++++++|+++.+|....      ...++...++.+++++
T Consensus       203 ~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~i  281 (345)
T 2j3h_A          203 DDAFNYKEESDLTAALKRCFPNGIDIYFENVGGK-MLDAVLVNMNMHGRIAVCGMISQYNLENQEGVHNLSNIIYKRNRI  281 (345)
T ss_dssp             SEEEETTSCSCSHHHHHHHCTTCEEEEEESSCHH-HHHHHHTTEEEEEEEEECCCGGGTTCSSCCCBSCTTHHHHHTCEE
T ss_pred             ceEEecCCHHHHHHHHHHHhCCCCcEEEECCCHH-HHHHHHHHHhcCCEEEEEccccccccCCccccccHHHHhhhceee
Confidence            999987653 2   333333 3799999999985 88999999999999999987543      2334555677889999


Q ss_pred             EEEeecCH-----HHHHHHHHHHHhcCCCccE-EEeecccHHHHHHHHHcCCccEEEEEecCC
Q 018382          296 TGSFIGSM-----KETKEMLEFCREKGVTSMI-EVIKMDYVNKAFERLEKNDVRYRFVVDVAG  352 (357)
Q Consensus       296 ~g~~~~~~-----~~~~~~~~~~~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~~~  352 (357)
                      .|+..+..     +.++++++++++|++++.+ ++|+++++++||+.+++++..||+++++++
T Consensus       282 ~g~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~~  344 (345)
T 2j3h_A          282 QGFVVSDFYDKYSKFLEFVLPHIREGKITYVEDVADGLEKAPEALVGLFHGKNVGKQVVVVAR  344 (345)
T ss_dssp             EECCGGGGGGGHHHHHHHHHHHHHTTSSCCCEEEEESGGGSHHHHHHHHTTCCSSEEEEESSC
T ss_pred             ceeeehhhhhhHHHHHHHHHHHHHCCCCcCcccccCCHHHHHHHHHHHHcCCCceEEEEEeCC
Confidence            99876542     2388999999999999877 689999999999999999999999999864

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=100.00  E-value=1e-33  Score=312.75  Aligned_cols=274  Identities=22%  Similarity=0.254  Sum_probs=228.0

Q ss_pred             CCcEEEEEeeeccccchHHHHhcCCCCC-------CCCCccCccccEEEEEeCCCCCCCCCCCEEEEccccCCCCCCccc
Q 018382           34 AEDVYIKVLYCGICHTDIHQIKNDLGMS-------NYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPC  106 (357)
Q Consensus        34 ~~evlV~v~~~~~~~~D~~~~~g~~~~~-------~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~g~~~~~  106 (357)
                      ++||+|||.++++|+.|+++..|.++..       ..|.++|+|++|+|.          +||+|+..            
T Consensus      1559 ~~eVlVkV~aaglN~~Dv~~~~G~~~~~~~p~~~~~~~~~lG~E~aG~V~----------vGdrV~g~------------ 1616 (2512)
T 2vz8_A         1559 CQDRLCSVYYTSLNFRDVMLATGKLSPDSIPGKWLTRDCMLGMEFSGRDA----------SGRRVMGM------------ 1616 (2512)
T ss_dssp             HHTTEEEEEEEECCHHHHHHHHTSSCGGGCCSCCSCSSSCCCCEEEEEET----------TSCCEEEE------------
T ss_pred             CCceEEEEEecccCHHHHHHHhCCCccccccccccccCCceEEEEEEEEc----------cCCEEEEe------------
Confidence            7999999999999999999999976521       235689999999873          69999743            


Q ss_pred             ccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhhhhhhhhccCCCCCCCeEEE
Q 018382          107 EADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGI  186 (357)
Q Consensus       107 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI  186 (357)
                                             ...|+|+||++++++.++++|+++++++||++++.++|||+++...+.+++|++|||
T Consensus      1617 -----------------------~~~G~~Aeyv~vp~~~v~~iPd~ls~~eAA~lp~~~~TA~~al~~~a~l~~Ge~VLI 1673 (2512)
T 2vz8_A         1617 -----------------------VPAEGLATSVLLLQHATWEVPSTWTLEEAASVPIVYTTAYYSLVVRGRMQPGESVLI 1673 (2512)
T ss_dssp             -----------------------CSSCCSBSEEECCGGGEEECCTTSCHHHHTTSHHHHHHHHHHHTTTTCCCTTCEEEE
T ss_pred             -----------------------ecCCceeeEEEcccceEEEeCCCCCHHHHHHhHHHHHHHHHHHHHHhcCCCCCEEEE
Confidence                                   246999999999999999999999999999999999999999988888899999999


Q ss_pred             Eec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCCcEEEcCCChhHHHHh---hC--CccEEEEcCCCCCC
Q 018382          187 LGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGADQYLVSSDATRMQEA---AD--SLDYIIDTVPANHP  257 (357)
Q Consensus       187 ~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~~~vv~~~~~~~~~~~---~~--~~d~v~d~~g~~~~  257 (357)
                      +|+ |++|++++|+|+..|++|+++++++++.+.+++.   +|+++++++++.+..+.+   ++  ++|+|||++++. .
T Consensus      1674 ~gaaGgVG~aAiqlAk~~Ga~Viat~~s~~k~~~l~~~~~~lga~~v~~~~~~~~~~~i~~~t~g~GvDvVld~~g~~-~ 1752 (2512)
T 2vz8_A         1674 HSGSGGVGQAAIAIALSRGCRVFTTVGSAEKRAYLQARFPQLDETCFANSRDTSFEQHVLRHTAGKGVDLVLNSLAEE-K 1752 (2512)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTCCSTTEEESSSSHHHHHHHHTTTSCCEEEEEECCCHH-H
T ss_pred             EeCChHHHHHHHHHHHHcCCEEEEEeCChhhhHHHHhhcCCCCceEEecCCCHHHHHHHHHhcCCCCceEEEECCCch-H
Confidence            976 9999999999999999999999999998888874   578999998886655443   32  799999999865 8


Q ss_pred             hHHHHhccccCCeEEEEccCCCCc-ccchHHHhhccceEEEEeecC-----HHHHHHHHHHHH----hcCCCccE-EEee
Q 018382          258 LEPYLSLLKLDGKLILTGVINTPM-QFLTPMVMLGRKAITGSFIGS-----MKETKEMLEFCR----EKGVTSMI-EVIK  326 (357)
Q Consensus       258 ~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~~~~----~~~l~~~i-~~~~  326 (357)
                      +..++++++++|+++.+|...... ......++.+++++.++....     .+.++.+++++.    ++.+++.+ ++|+
T Consensus      1753 l~~~l~~L~~~Gr~V~iG~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~l~~l~~~~~~g~l~p~i~~~f~ 1832 (2512)
T 2vz8_A         1753 LQASVRCLAQHGRFLEIGKFDLSNNHALGMAVFLKNVTFHGILLDSLFEEGGATWQEVSELLKAGIQEGVVQPLKCTVFP 1832 (2512)
T ss_dssp             HHHHHTTEEEEEEEEECCCHHHHTTCEEEGGGGGGCCEEEECCGGGTTSSCCHHHHHHHHHHHHHHTTTCSCCCCEEEEE
T ss_pred             HHHHHHhcCCCcEEEEeecccccccCcccccccccCCcEEEeeHHHHhhhCHHHHHHHHHHHHHHHHcCCcCCCcceEec
Confidence            899999999999999998542111 111233556888998876532     245555555554    57788876 9999


Q ss_pred             cccHHHHHHHHHcCCccEEEEEecCCC
Q 018382          327 MDYVNKAFERLEKNDVRYRFVVDVAGS  353 (357)
Q Consensus       327 ~~~~~~a~~~~~~~~~~Gkvvi~~~~~  353 (357)
                      ++++++||+.+++++..||+|++++++
T Consensus      1833 l~ei~eA~~~l~~g~~~GKvVi~~~~~ 1859 (2512)
T 2vz8_A         1833 RTKVEAAFRYMAQGKHIGKVVIQVREE 1859 (2512)
T ss_dssp             SSTHHHHHHHHHTTCCSSEEEEECSCC
T ss_pred             HHHHHHHHHhhhccCccceEEEECCCc
Confidence            999999999999999999999998654

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=99.86  E-value=6e-22  Score=167.91  Aligned_cols=176  Identities=22%  Similarity=0.269  Sum_probs=131.3

Q ss_pred             cceEECCCCCCccccccccchhhhhhhhhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHH
Q 018382          144 KFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAME  222 (357)
Q Consensus       144 ~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~  222 (357)
                      +.++++|+++++++||++++++.|||+++.+...+++|++|||+|+ |++|++++|+++..|++|+++++++++.+.+++
T Consensus         2 ~~~~~~P~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~   81 (198)
T 1pqw_A            2 DLVVPIPDTLADNEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSR   81 (198)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHT
T ss_pred             CceeECCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Confidence            5688999999999999999999999999987777799999999985 999999999999999999999999888877766


Q ss_pred             hcCCcEEEcCCChhHHHHh---h--CCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCC--CcccchHHHhhccceE
Q 018382          223 HLGADQYLVSSDATRMQEA---A--DSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINT--PMQFLTPMVMLGRKAI  295 (357)
Q Consensus       223 ~~g~~~vv~~~~~~~~~~~---~--~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~~~i  295 (357)
                       +|+++++|.++.+..+.+   .  .++|++||++|.. .+..++++++++|+++.+|....  ...++.. .+.+++++
T Consensus        82 -~g~~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~~  158 (198)
T 1pqw_A           82 -LGVEYVGDSRSVDFADEILELTDGYGVDVVLNSLAGE-AIQRGVQILAPGGRFIELGKKDVYADASLGLA-ALAKSASF  158 (198)
T ss_dssp             -TCCSEEEETTCSTHHHHHHHHTTTCCEEEEEECCCTH-HHHHHHHTEEEEEEEEECSCGGGTTTCEEEGG-GGTTTCEE
T ss_pred             -cCCCEEeeCCcHHHHHHHHHHhCCCCCeEEEECCchH-HHHHHHHHhccCCEEEEEcCCCCcCcCcCChh-HhcCCcEE
Confidence             899888887765443332   2  2699999999875 78899999999999999987542  2223322 34577887


Q ss_pred             EEEee------cC---HHHHHHHHHHHHhcCCCccE
Q 018382          296 TGSFI------GS---MKETKEMLEFCREKGVTSMI  322 (357)
Q Consensus       296 ~g~~~------~~---~~~~~~~~~~~~~~~l~~~i  322 (357)
                      .+...      ..   .+.++++++++++|++++.+
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~  194 (198)
T 1pqw_A          159 SVVDLDLNLKLQPARYRQLLQHILQHVADGKLEVLP  194 (198)
T ss_dssp             EECCHHHHHHHCHHHHHHHHHHHHHHHHTTSSCCCC
T ss_pred             EEEehHHhhccCHHHHHHHHHHHHHHHHcCCccCCC
Confidence            76432      11   35678999999999998754

>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}

Probab=99.06  E-value=9.6e-10  Score=95.63  Aligned_cols=170  Identities=13%  Similarity=0.046  Sum_probs=107.2

Q ss_pred             CCCCCEEEEccc------cCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCcc--
Q 018382           85 FKVGDKVGVGVL------VGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALE--  156 (357)
Q Consensus        85 ~~~Gd~V~~~~~------~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~--  156 (357)
                      +++||+|++.+.      ...||.|..|+.|..+.|+..+..           .|+..      +..+++.|+...+.  
T Consensus         4 ~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~G~~~~~~~~g~~-----------~G~~~------~~~~~~~p~~~~~~~~   66 (248)
T 2yvl_A            4 FKEGEYVLIRFGEKKFLRKLLPKQSLSVKKSVLKFDEVIGKP-----------EGVKI------NGFEVYRPTLEEIILL   66 (248)
T ss_dssp             CCTTCEEEEEETTEEEEEECCTTCEEEETTEEEEGGGTTTCC-----------TTEEE------TTEEEECCCHHHHHHH
T ss_pred             CCCCCEEEEEeCCeEEEEEEcCCCEEecCCceEEHHHhcCCC-----------CCCEE------EEEEEeCCCHHHHHHh
Confidence            899999988763      446899999999988888753211           22221      23334444321111  


Q ss_pred             ---ccccccchhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc---CC--c-
Q 018382          157 ---QAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL---GA--D-  227 (357)
Q Consensus       157 ---~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~---g~--~-  227 (357)
                         ..+.+... ..+...+.... +.++++||.+|+| .|..++.+++. +.+|++++.+++..+.+++.+   +.  . 
T Consensus        67 ~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~vldiG~G-~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~  142 (248)
T 2yvl_A           67 GFERKTQIIYP-KDSFYIALKLN-LNKEKRVLEFGTG-SGALLAVLSEV-AGEVWTFEAVEEFYKTAQKNLKKFNLGKNV  142 (248)
T ss_dssp             TSCCSSCCCCH-HHHHHHHHHTT-CCTTCEEEEECCT-TSHHHHHHHHH-SSEEEEECSCHHHHHHHHHHHHHTTCCTTE
T ss_pred             cCcCCCCcccc-hhHHHHHHhcC-CCCCCEEEEeCCC-ccHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCCcE
Confidence               11111112 22223344444 3889999999998 68889999988 889999999988877776632   42  1 


Q ss_pred             EEEcCCChhHHHHhhCCccEEEEcCCCC-CChHHHHhccccCCeEEEEcc
Q 018382          228 QYLVSSDATRMQEAADSLDYIIDTVPAN-HPLEPYLSLLKLDGKLILTGV  276 (357)
Q Consensus       228 ~vv~~~~~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~~l~~~G~~v~~g~  276 (357)
                      .++..+-.+.. ...+++|+|+...+.. ..++.+.+.|+++|+++....
T Consensus       143 ~~~~~d~~~~~-~~~~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~~  191 (248)
T 2yvl_A          143 KFFNVDFKDAE-VPEGIFHAAFVDVREPWHYLEKVHKSLMEGAPVGFLLP  191 (248)
T ss_dssp             EEECSCTTTSC-CCTTCBSEEEECSSCGGGGHHHHHHHBCTTCEEEEEES
T ss_pred             EEEEcChhhcc-cCCCcccEEEECCcCHHHHHHHHHHHcCCCCEEEEEeC
Confidence            22221111110 0123799999877764 467889999999999987744

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=98.99  E-value=4.8e-12  Score=118.34  Aligned_cols=181  Identities=14%  Similarity=0.130  Sum_probs=128.3

Q ss_pred             ccCccccEEEEEeCCCCCCCCCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcc
Q 018382           66 VPGHEVVGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKF  145 (357)
Q Consensus        66 ~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~  145 (357)
                      ..|++.++.|.++|++++++.+|+.+.+....          .+. ..               ....|++++|+......
T Consensus        76 ~~g~~a~~~i~~v~~Glds~~vGe~~Il~qvk----------~~~-~~---------------~~~~G~~~~~~~~~~~~  129 (404)
T 1gpj_A           76 KRGSEAVRHLFRVASGLESMMVGEQEILRQVK----------KAY-DR---------------AARLGTLDEALKIVFRR  129 (404)
T ss_dssp             EEHHHHHHHHHHHHTTTTSSSTTCHHHHHHHH----------HHH-HH---------------HHHHTCCCHHHHHHHHH
T ss_pred             ecCchHhhhheeeccCCCCCcCCcchhHHHHH----------HHH-HH---------------HHHcCCchHHHHHHHHH
Confidence            57999999999999999999999987321000          000 00               01346788888888888


Q ss_pred             eEECCCCCCccccccccchhhhhhhhhhccCC---CCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHH
Q 018382          146 VVKIPDGMALEQAAPLLCAGVTVFSPLSHFGL---KQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAM  221 (357)
Q Consensus       146 ~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~---~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~  221 (357)
                      ++++|++++.+.++. ..++.++|.++..+..   -.+|++|+|+|+|.+|.++++.++..|+ +|+++.++.++.+.+.
T Consensus       130 a~~~~k~v~~~~~~~-~~~~s~a~~av~~a~~~~~~l~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la  208 (404)
T 1gpj_A          130 AINLGKRAREETRIS-EGAVSIGSAAVELAERELGSLHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELA  208 (404)
T ss_dssp             HHHHHHHHHHHSSTT-CSCCSHHHHHHHHHHHHHSCCTTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHH
T ss_pred             HhhhhccCcchhhhc-CCCccHHHHHHHHHHHHhccccCCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHH
Confidence            899999888777654 3456677777654331   1579999999999999999999999999 9999999988875555


Q ss_pred             HhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCCChH--HHHhc--c--ccCCeEEEEccC
Q 018382          222 EHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLE--PYLSL--L--KLDGKLILTGVI  277 (357)
Q Consensus       222 ~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~~~--~~~~~--l--~~~G~~v~~g~~  277 (357)
                      +.+|++ +++..   .+.+...++|+|+++++....+.  ..++.  +  +++|.++.++..
T Consensus       209 ~~~g~~-~~~~~---~l~~~l~~aDvVi~at~~~~~~~~~~~l~~~~lk~r~~~~~v~vdia  266 (404)
T 1gpj_A          209 RDLGGE-AVRFD---ELVDHLARSDVVVSATAAPHPVIHVDDVREALRKRDRRSPILIIDIA  266 (404)
T ss_dssp             HHHTCE-ECCGG---GHHHHHHTCSEEEECCSSSSCCBCHHHHHHHHHHCSSCCCEEEEECC
T ss_pred             HHcCCc-eecHH---hHHHHhcCCCEEEEccCCCCceecHHHHHHHHHhccCCCCEEEEEcc
Confidence            558976 34332   23344468999999998764432  44554  3  556776666553

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=98.94  E-value=3.5e-09  Score=97.43  Aligned_cols=135  Identities=16%  Similarity=0.111  Sum_probs=96.2

Q ss_pred             CCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcE--EEcCCChhHHHHhhCCccEEEEcCCCCCC-
Q 018382          181 GLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQ--YLVSSDATRMQEAADSLDYIIDTVPANHP-  257 (357)
Q Consensus       181 ~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~--vv~~~~~~~~~~~~~~~d~v~d~~g~~~~-  257 (357)
                      +++|+|+|+|++|+++++.++..|++|+++++++++.+.+.+ ++...  +++.+.. .+.+...++|+||+|++.... 
T Consensus       167 ~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~DvVI~~~~~~~~~  244 (361)
T 1pjc_A          167 PGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERLSYLET-LFGSRVELLYSNSA-EIETAVAEADLLIGAVLVPGRR  244 (361)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-HHGGGSEEEECCHH-HHHHHHHTCSEEEECCCCTTSS
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHH-hhCceeEeeeCCHH-HHHHHHcCCCEEEECCCcCCCC
Confidence            489999999999999999999999999999999999888877 44332  3433322 233333489999999987531 


Q ss_pred             -----hHHHHhccccCCeEEEEccCCC-------CcccchHHHhhccceEEEEeec------------CHHHHHHHHHHH
Q 018382          258 -----LEPYLSLLKLDGKLILTGVINT-------PMQFLTPMVMLGRKAITGSFIG------------SMKETKEMLEFC  313 (357)
Q Consensus       258 -----~~~~~~~l~~~G~~v~~g~~~~-------~~~~~~~~~~~~~~~i~g~~~~------------~~~~~~~~~~~~  313 (357)
                           .+..++.|+++|.+++++...+       ...++...+..+++++.+...-            ....++.+++++
T Consensus       245 ~~~li~~~~~~~~~~g~~ivdv~~~~gg~~e~~~~~~~~~~~~~~~~v~~~~~~~lp~~~~~~~s~~~~~~~~~~l~~l~  324 (361)
T 1pjc_A          245 APILVPASLVEQMRTGSVIVDVAVDQGGCVETLHPTSHTQPTYEVFGVVHYGVPNMPGAVPWTATQALNNSTLPYVVKLA  324 (361)
T ss_dssp             CCCCBCHHHHTTSCTTCEEEETTCTTCCSBTTCCCCCSSSCEEEETTEEEECCSCGGGGCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCeecCHHHHhhCCCCCEEEEEecCCCCCCccccCCCCCCCEEEECCEEEEEeCCcchhhHHHHHHHHHHHHHHHHHHHH
Confidence                 5678899999999999987543       2233444455677777665421            113356777788


Q ss_pred             HhcC
Q 018382          314 REKG  317 (357)
Q Consensus       314 ~~~~  317 (357)
                      .+|.
T Consensus       325 ~~G~  328 (361)
T 1pjc_A          325 NQGL  328 (361)
T ss_dssp             HHGG
T ss_pred             hCCc
Confidence            7773

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=98.94  E-value=3.3e-09  Score=98.07  Aligned_cols=137  Identities=17%  Similarity=0.132  Sum_probs=95.8

Q ss_pred             CCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCCC--
Q 018382          180 SGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHP--  257 (357)
Q Consensus       180 ~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~--  257 (357)
                      ++++|+|+|+|.+|+++++.++.+|++|++.++++++.+.+.+.+|+....+......+.+...++|+|++|++.+..  
T Consensus       167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~l~~aDvVi~~~~~p~~~t  246 (377)
T 2vhw_A          167 EPADVVVIGAGTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGRIHTRYSSAYELEGAVKRADLVIGAVLVPGAKA  246 (377)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSSEEEECCHHHHHHHHHHCSEEEECCCCTTSCC
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCeeEeccCCHHHHHHHHcCCCEEEECCCcCCCCC
Confidence            578999999999999999999999999999999999888887767865333333333344445589999999876532  


Q ss_pred             ----hHHHHhccccCCeEEEEccCCC-------CcccchHHHhhccceEEEEeec------------CHHHHHHHHHHHH
Q 018382          258 ----LEPYLSLLKLDGKLILTGVINT-------PMQFLTPMVMLGRKAITGSFIG------------SMKETKEMLEFCR  314 (357)
Q Consensus       258 ----~~~~~~~l~~~G~~v~~g~~~~-------~~~~~~~~~~~~~~~i~g~~~~------------~~~~~~~~~~~~~  314 (357)
                          ....++.|+++|.++.++...+       +..++...+..+++.+.+...-            ....++.+++++.
T Consensus       247 ~~li~~~~l~~mk~g~~iV~va~~~Ggv~e~~ep~~~~~~~~~~~~v~i~~~phl~~~~~~~as~~~~~~~~~~~~~l~~  326 (377)
T 2vhw_A          247 PKLVSNSLVAHMKPGAVLVDIAIDQGGCFEGSRPTTYDHPTFAVHDTLFYCVANMPASVPKTSTYALTNATMPYVLELAD  326 (377)
T ss_dssp             CCCBCHHHHTTSCTTCEEEEGGGGTTCSBTTCCCBCSSSCEEEETTEEEECBTTGGGGSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cceecHHHHhcCCCCcEEEEEecCCCCccccccCCCCCCCEEEECCEEEEecCCcchhhHHHHHHHHHHHHHHHHHHHHh
Confidence                5778899999999999985432       2223333334456665444431            1122456666666


Q ss_pred             hc
Q 018382          315 EK  316 (357)
Q Consensus       315 ~~  316 (357)
                      +|
T Consensus       327 ~g  328 (377)
T 2vhw_A          327 HG  328 (377)
T ss_dssp             HH
T ss_pred             CC
Confidence            66

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.94  E-value=8.3e-09  Score=95.23  Aligned_cols=138  Identities=18%  Similarity=0.177  Sum_probs=93.8

Q ss_pred             CCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCC---
Q 018382          180 SGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANH---  256 (357)
Q Consensus       180 ~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~---  256 (357)
                      ++++|+|+|+|.+|+++++.++..|++|+++++++++.+.+.+.+|.....+..+.+.+.+...++|+|+++++...   
T Consensus       165 ~~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~~~~~DvVi~~~g~~~~~~  244 (369)
T 2eez_A          165 APASVVILGGGTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGGRVITLTATEANIKKSVQHADLLIGAVLVPGAKA  244 (369)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSEEEEECCHHHHHHHHHHCSEEEECCC------
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCceEEEecCCHHHHHHHHhCCCEEEECCCCCcccc
Confidence            46899999999999999999999999999999999888877766787644444444445555568999999998652   


Q ss_pred             ---ChHHHHhccccCCeEEEEccCCCC-------cccchHHHhhccceEEEEee------------cCHHHHHHHHHHHH
Q 018382          257 ---PLEPYLSLLKLDGKLILTGVINTP-------MQFLTPMVMLGRKAITGSFI------------GSMKETKEMLEFCR  314 (357)
Q Consensus       257 ---~~~~~~~~l~~~G~~v~~g~~~~~-------~~~~~~~~~~~~~~i~g~~~------------~~~~~~~~~~~~~~  314 (357)
                         ..+..++.|+++|.++.++...+.       ..++...+..+++++.+...            .+...++.+++++.
T Consensus       245 ~~li~~~~l~~mk~gg~iV~v~~~~gg~~d~~ep~~~~~~~~~~~~v~~~~v~~lp~~~p~~as~~~~~~~~~~l~~l~~  324 (369)
T 2eez_A          245 PKLVTRDMLSLMKEGAVIVDVAVDQGGCVETIRPTTHAEPTYVVDGVVHYGVANMPGAVPRTSTFALTNQTLPYVLKLAE  324 (369)
T ss_dssp             -CCSCHHHHTTSCTTCEEEECC-------------------CEETTEEEECCSCSGGGSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             chhHHHHHHHhhcCCCEEEEEecCCCCCCCcccCCCCCCCEEEECCEEEEeeCCcchhcHHHHHHHHHHHHHHHHHHHHh
Confidence               157788999999999999875431       22233334456666665442            11234567777777


Q ss_pred             hcC
Q 018382          315 EKG  317 (357)
Q Consensus       315 ~~~  317 (357)
                      ++.
T Consensus       325 ~g~  327 (369)
T 2eez_A          325 KGL  327 (369)
T ss_dssp             HTT
T ss_pred             cCh
Confidence            663

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=98.92  E-value=6.7e-09  Score=96.36  Aligned_cols=156  Identities=14%  Similarity=0.102  Sum_probs=108.8

Q ss_pred             CCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEE-EcCCC----------------------hh
Q 018382          180 SGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQY-LVSSD----------------------AT  236 (357)
Q Consensus       180 ~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~v-v~~~~----------------------~~  236 (357)
                      ++++|+|+|+|.+|++++++++.+|++|++.++++++.+.+++ +|++.+ ++..+                      .+
T Consensus       171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~~-~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~~  249 (384)
T 1l7d_A          171 PPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQVES-LGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAE  249 (384)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHH-TTCEECCC-----------------------CCHHH
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCCeEEeecccccccccccccchhhcCHHHHhhhHH
Confidence            6899999999999999999999999999999999888888877 998754 22211                      11


Q ss_pred             HHHHhhCCccEEEEcC---CCC--CC-hHHHHhccccCCeEEEEccCCC-Ccc--cchHHHhhccceEEEEeecCHHHHH
Q 018382          237 RMQEAADSLDYIIDTV---PAN--HP-LEPYLSLLKLDGKLILTGVINT-PMQ--FLTPMVMLGRKAITGSFIGSMKETK  307 (357)
Q Consensus       237 ~~~~~~~~~d~v~d~~---g~~--~~-~~~~~~~l~~~G~~v~~g~~~~-~~~--~~~~~~~~~~~~i~g~~~~~~~~~~  307 (357)
                      .+.+...++|+|++++   |..  .. ....++.|++++.++.++...+ ...  .+...+..+.+++.+.........+
T Consensus       250 ~l~~~~~~aDvVi~~~~~pg~~~~~li~~~~l~~mk~g~vivdva~~~gg~~~~~~~~~~~~~~~v~i~g~~~~p~~~~~  329 (384)
T 1l7d_A          250 AVLKELVKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAVEAGGNCPLSEPGKIVVKHGVKIVGHTNVPSRVAA  329 (384)
T ss_dssp             HHHHHHTTCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTGGGTCSSTTCCTTCEEEETTEEEECCSSGGGGGHH
T ss_pred             HHHHHhCCCCEEEECCccCCCCCCeeeCHHHHhcCCCCCEEEEEecCCCCCeecccCCcEEEECCEEEEEeCCCcchhHH
Confidence            2445556899999999   532  12 3678899999999999986432 221  2333345677888887765444567


Q ss_pred             HHHHHHHhcCCCc---cEE----EeecccHHHHHHH
Q 018382          308 EMLEFCREKGVTS---MIE----VIKMDYVNKAFER  336 (357)
Q Consensus       308 ~~~~~~~~~~l~~---~i~----~~~~~~~~~a~~~  336 (357)
                      ++.+++.++.+..   ..+    .+.++.-++.++.
T Consensus       330 ~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~  365 (384)
T 1l7d_A          330 DASPLFAKNLLNFLTPHVDKDTKTLVMKLEDETVSG  365 (384)
T ss_dssp             HHHHHHHHHHHHHHGGGEETTTTEECCCTTCHHHHH
T ss_pred             HHHHHHHHhHHHHHHHHHhCCcchhhccccCHHHhc
Confidence            7888888875543   221    4455544555554

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=98.72  E-value=8.2e-08  Score=89.31  Aligned_cols=138  Identities=12%  Similarity=0.131  Sum_probs=94.8

Q ss_pred             CCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEE-cCC-------------Chh-------HH
Q 018382          180 SGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYL-VSS-------------DAT-------RM  238 (357)
Q Consensus       180 ~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv-~~~-------------~~~-------~~  238 (357)
                      ++++|+|+|+|.+|++++++++.+|++|++++++.++.+.+.+ +|++.+. +..             ..+       .+
T Consensus       171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~~~-lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l  249 (401)
T 1x13_A          171 PPAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQS-MGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMELF  249 (401)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCGGGHHHHHH-TTCEECCC--------CCHHHHHHSHHHHHHHHHHH
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH-cCCEEEEecccccccccccchhhccHHHHHHHHHHH
Confidence            5789999999999999999999999999999999998888866 8986542 211             111       23


Q ss_pred             HHhhCCccEEEEcCCC-----CCCh-HHHHhccccCCeEEEEccCC-CCcccchH---HHhhccceEEEEeecCHHHHHH
Q 018382          239 QEAADSLDYIIDTVPA-----NHPL-EPYLSLLKLDGKLILTGVIN-TPMQFLTP---MVMLGRKAITGSFIGSMKETKE  308 (357)
Q Consensus       239 ~~~~~~~d~v~d~~g~-----~~~~-~~~~~~l~~~G~~v~~g~~~-~~~~~~~~---~~~~~~~~i~g~~~~~~~~~~~  308 (357)
                      .+...++|+||++++.     ...+ ...++.|++++.++.++... +...+...   .+..+.+++.+......+..+.
T Consensus       250 ~e~~~~aDvVI~~~~~pg~~ap~li~~~~l~~mk~g~vIVdva~~~Gg~v~~~~~~~p~~~~~gv~i~g~~~~p~~~~~~  329 (401)
T 1x13_A          250 AAQAKEVDIIVTTALIPGKPAPKLITREMVDSMKAGSVIVDLAAQNGGNCEYTVPGEIFTTENGVKVIGYTDLPGRLPTQ  329 (401)
T ss_dssp             HHHHHHCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGGGTCSBTTCCTTSEEECTTSCEEECCSCTGGGSHHH
T ss_pred             HHHhCCCCEEEECCccCCCCCCeeeCHHHHhcCCCCcEEEEEcCCCCCCcCcccCCCceEEECCEEEEeeCCCcccCHHH
Confidence            3444579999999522     1233 57899999999999998653 32333211   1456788888876543222234


Q ss_pred             HHHHHHhcCC
Q 018382          309 MLEFCREKGV  318 (357)
Q Consensus       309 ~~~~~~~~~l  318 (357)
                      +.+++.++.+
T Consensus       330 a~~ll~~~~~  339 (401)
T 1x13_A          330 SSQLYGTNLV  339 (401)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHhHH
Confidence            6666665544

>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*

Probab=98.60  E-value=1.2e-07  Score=89.78  Aligned_cols=173  Identities=16%  Similarity=0.098  Sum_probs=113.1

Q ss_pred             hhhhhhhhhhccC-CCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhh
Q 018382          164 AGVTVFSPLSHFG-LKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAA  242 (357)
Q Consensus       164 ~~~ta~~~l~~~~-~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~  242 (357)
                      ...++|.++.... ...+|++|+|+|.|.+|..+++.++..|++|+++++++.+.+.+.+ +|++ +++      +.+..
T Consensus       256 ~~~s~~~g~~r~~~~~l~GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~~-~Ga~-~~~------l~e~l  327 (494)
T 3ce6_A          256 TRHSLIDGINRGTDALIGGKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDPINALQAMM-EGFD-VVT------VEEAI  327 (494)
T ss_dssp             HHHHHHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-TTCE-ECC------HHHHG
T ss_pred             hhhhhhHHHHhccCCCCCcCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCCE-Eec------HHHHH
Confidence            3455666654433 2478999999999999999999999999999999999888877777 8985 322      22344


Q ss_pred             CCccEEEEcCCCCCChH-HHHhccccCCeEEEEccCCCCcccchHHHhhccc---eEEEEee-cCHHHHHHHHHHHHhcC
Q 018382          243 DSLDYIIDTVPANHPLE-PYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRK---AITGSFI-GSMKETKEMLEFCREKG  317 (357)
Q Consensus       243 ~~~d~v~d~~g~~~~~~-~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~---~i~g~~~-~~~~~~~~~~~~~~~~~  317 (357)
                      .++|+|+++++....+. ..++.|+++|+++.+|....  .++...+..+.+   ++.+... .....+...+.++.++.
T Consensus       328 ~~aDvVi~atgt~~~i~~~~l~~mk~ggilvnvG~~~~--eId~~aL~~~aL~~~~I~~~ldv~~~~~~~~~l~LL~~gr  405 (494)
T 3ce6_A          328 GDADIVVTATGNKDIIMLEHIKAMKDHAILGNIGHFDN--EIDMAGLERSGATRVNVKPQVDLWTFGDTGRSIIVLSEGR  405 (494)
T ss_dssp             GGCSEEEECSSSSCSBCHHHHHHSCTTCEEEECSSSGG--GBCHHHHHHTTCEEEEEETTEEEEECTTTCCEEEEEGGGS
T ss_pred             hCCCEEEECCCCHHHHHHHHHHhcCCCcEEEEeCCCCC--ccCHHHHHHhhhccceEEEEEEEeecCCcchHHHHHhCCC
Confidence            68999999999876666 78899999999999976532  244444444333   3332111 00011112222344444


Q ss_pred             CC------ccE-----EEeecccHHHHHHHHHcCCccEEEE
Q 018382          318 VT------SMI-----EVIKMDYVNKAFERLEKNDVRYRFV  347 (357)
Q Consensus       318 l~------~~i-----~~~~~~~~~~a~~~~~~~~~~Gkvv  347 (357)
                      +.      +.+     +.| ++++.++++.+.+++..++.|
T Consensus       406 lvnL~~~TPH~a~~~~~s~-~~qa~~ai~~~~~g~~~~~~V  445 (494)
T 3ce6_A          406 LLNLGNATGHPSFVMSNSF-ANQTIAQIELWTKNDEYDNEV  445 (494)
T ss_dssp             CHHHHHSCCSCHHHHHHHH-HHHHHHHHHHHHTGGGCCSSE
T ss_pred             EEeccCCCCCccccchHHH-HHHHHHHHHHHHcCCCCCCEE
Confidence            42      211     223 567788888887766655443

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=98.55  E-value=5.9e-08  Score=77.02  Aligned_cols=108  Identities=14%  Similarity=-0.011  Sum_probs=80.2

Q ss_pred             hhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCC
Q 018382          165 GVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADS  244 (357)
Q Consensus       165 ~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~  244 (357)
                      .+.++.++..+.. ..+++|+|+|+|.+|.++++.++..|++|++..+++++.+.+.+++|.+.. ...+   +.+...+
T Consensus         6 ~sv~~~a~~~~~~-~~~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~~~~~-~~~~---~~~~~~~   80 (144)
T 3oj0_A            6 VSIPSIVYDIVRK-NGGNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYEYEYV-LIND---IDSLIKN   80 (144)
T ss_dssp             CSHHHHHHHHHHH-HCCCEEEEECCSHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHTCEEE-ECSC---HHHHHHT
T ss_pred             ccHHHHHHHHHHh-ccCCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhCCceE-eecC---HHHHhcC
Confidence            3456666666555 568999999999999999999988899999999999988877666885432 2222   2333457


Q ss_pred             ccEEEEcCCCCCChHHHHhccccCCeEEEEccCC
Q 018382          245 LDYIIDTVPANHPLEPYLSLLKLDGKLILTGVIN  278 (357)
Q Consensus       245 ~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~  278 (357)
                      +|+|+++++...... ..+.+++++.++.++.+.
T Consensus        81 ~Divi~at~~~~~~~-~~~~l~~g~~vid~~~p~  113 (144)
T 3oj0_A           81 NDVIITATSSKTPIV-EERSLMPGKLFIDLGNPP  113 (144)
T ss_dssp             CSEEEECSCCSSCSB-CGGGCCTTCEEEECCSSC
T ss_pred             CCEEEEeCCCCCcEe-eHHHcCCCCEEEEccCCc
Confidence            999999999863332 237788889999887653

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=98.49  E-value=1e-06  Score=81.13  Aligned_cols=136  Identities=15%  Similarity=0.140  Sum_probs=92.4

Q ss_pred             CCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEc-------------CCC----------hh
Q 018382          180 SGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLV-------------SSD----------AT  236 (357)
Q Consensus       180 ~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~-------------~~~----------~~  236 (357)
                      ++.+|+|+|+|.+|+.++++++.+|++|++.++++++.+.+.+ +|++.+-.             +..          ..
T Consensus       189 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~-~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~  267 (405)
T 4dio_A          189 PAAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPAAKEQVAS-LGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQAA  267 (405)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHH-TTCEECCCCC-----------------CHHHHHHHH
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH-cCCceeecccccccccccccchhhhcchhhhhhhHh
Confidence            5789999999999999999999999999999999999888888 88753211             000          11


Q ss_pred             HHHHhhCCccEEEEcCCCC-----C-ChHHHHhccccCCeEEEEccCC-CCccc--chHHHhhccceEEEEeecCHHHHH
Q 018382          237 RMQEAADSLDYIIDTVPAN-----H-PLEPYLSLLKLDGKLILTGVIN-TPMQF--LTPMVMLGRKAITGSFIGSMKETK  307 (357)
Q Consensus       237 ~~~~~~~~~d~v~d~~g~~-----~-~~~~~~~~l~~~G~~v~~g~~~-~~~~~--~~~~~~~~~~~i~g~~~~~~~~~~  307 (357)
                      .+.+...+.|+||.|+..+     . ..+..++.|++++.+++++... +....  +...+..+.+.+.+..+-.-...+
T Consensus       268 ~l~e~l~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA~d~GG~~e~t~~~~~~~~~GV~~~gv~nlP~~vp~  347 (405)
T 4dio_A          268 LVAEHIAKQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLAVERGGNIEGAEAGKVTEVGGVRIVGHLNVAGRIAA  347 (405)
T ss_dssp             HHHHHHHTCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETTGGGTCSBTTCCTTEEEEETTEEEEECSSGGGGGHH
T ss_pred             HHHHHhcCCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEeCCCCCCccccCCCCeEEECCEEEEEeCCCCccCHH
Confidence            2334445899999986322     1 3468899999999999997633 22221  111233466777777764434445


Q ss_pred             HHHHHHHhc
Q 018382          308 EMLEFCREK  316 (357)
Q Consensus       308 ~~~~~~~~~  316 (357)
                      +...++.+.
T Consensus       348 tAS~~ls~~  356 (405)
T 4dio_A          348 SASLLYAKN  356 (405)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            555444443

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=98.45  E-value=8.2e-07  Score=81.08  Aligned_cols=98  Identities=14%  Similarity=0.116  Sum_probs=76.0

Q ss_pred             CCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEE-c--------C----------CChhHHHH
Q 018382          180 SGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYL-V--------S----------SDATRMQE  240 (357)
Q Consensus       180 ~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv-~--------~----------~~~~~~~~  240 (357)
                      ++.+|+|+|+|.+|+.+++.++.+|++|++.+++.++.+.+.+ +|++.+- +        +          ...+.+.+
T Consensus       183 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~-lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~e  261 (381)
T 3p2y_A          183 KPASALVLGVGVAGLQALATAKRLGAKTTGYDVRPEVAEQVRS-VGAQWLDLGIDAAGEGGYARELSEAERAQQQQALED  261 (381)
T ss_dssp             CCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHH-TTCEECCCC-------------CHHHHHHHHHHHHH
T ss_pred             CCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCCeEEeccccccccccchhhhhHHHHhhhHHHHHH
Confidence            6789999999999999999999999999999999999998888 8875431 0        0          01123444


Q ss_pred             hhCCccEEEEcCCCC-----C-ChHHHHhccccCCeEEEEccCC
Q 018382          241 AADSLDYIIDTVPAN-----H-PLEPYLSLLKLDGKLILTGVIN  278 (357)
Q Consensus       241 ~~~~~d~v~d~~g~~-----~-~~~~~~~~l~~~G~~v~~g~~~  278 (357)
                      ....+|+||.++..+     . ..+..++.|++++.+++++...
T Consensus       262 ~l~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDvA~d~  305 (381)
T 3p2y_A          262 AITKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDLAGET  305 (381)
T ss_dssp             HHTTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGGG
T ss_pred             HHhcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEEeCCC
Confidence            556999999986221     1 2468899999999999997654

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=98.25  E-value=3.3e-05  Score=68.70  Aligned_cols=100  Identities=21%  Similarity=0.218  Sum_probs=77.4

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCCCh
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPL  258 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~~  258 (357)
                      -+|++|+|+|.|.+|.++++.++..|++|++..++.++.+.+.+ +|+.. ++.   +.+.++....|+|+.+++....-
T Consensus       153 l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~-~g~~~-~~~---~~l~~~l~~aDvVi~~~p~~~i~  227 (293)
T 3d4o_A          153 IHGANVAVLGLGRVGMSVARKFAALGAKVKVGARESDLLARIAE-MGMEP-FHI---SKAAQELRDVDVCINTIPALVVT  227 (293)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-TTSEE-EEG---GGHHHHTTTCSEEEECCSSCCBC
T ss_pred             CCCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH-CCCee-cCh---hhHHHHhcCCCEEEECCChHHhC
Confidence            47899999999999999999999999999999999877666665 88653 222   23455567899999999875333


Q ss_pred             HHHHhccccCCeEEEEccCCCCccc
Q 018382          259 EPYLSLLKLDGKLILTGVINTPMQF  283 (357)
Q Consensus       259 ~~~~~~l~~~G~~v~~g~~~~~~~~  283 (357)
                      ...++.|++++.++.++-......+
T Consensus       228 ~~~l~~mk~~~~lin~ar~~~~~~~  252 (293)
T 3d4o_A          228 ANVLAEMPSHTFVIDLASKPGGTDF  252 (293)
T ss_dssp             HHHHHHSCTTCEEEECSSTTCSBCH
T ss_pred             HHHHHhcCCCCEEEEecCCCCCCCH
Confidence            5678889999999998754333433

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=98.23  E-value=5.8e-06  Score=62.52  Aligned_cols=93  Identities=15%  Similarity=0.115  Sum_probs=68.2

Q ss_pred             CCCeEEEEecChHHHHHHHHHHHcC-CeEEEEeCCcHHHHHHHHhcCCcE-EEcCCChhHHHHhhCCccEEEEcCCCCCC
Q 018382          180 SGLRGGILGLGGVGHMGVLIAKAMG-HHVTVISSSDKKRVEAMEHLGADQ-YLVSSDATRMQEAADSLDYIIDTVPANHP  257 (357)
Q Consensus       180 ~~~~VlI~G~g~~G~~ai~la~~~g-~~V~~~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~~~~d~v~d~~g~~~~  257 (357)
                      .+.+|+|+|+|.+|..+++.+...| .+|+++++++++.+.+.+ .+... ..|..+.+.+.+...++|+||++++.. .
T Consensus         4 ~~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~~~~-~   81 (118)
T 3ic5_A            4 MRWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDLAALAVLNR-MGVATKQVDAKDEAGLAKALGGFDAVISAAPFF-L   81 (118)
T ss_dssp             TCEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHT-TTCEEEECCTTCHHHHHHHTTTCSEEEECSCGG-G
T ss_pred             CcCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHh-CCCcEEEecCCCHHHHHHHHcCCCEEEECCCch-h
Confidence            4568999999999999999999999 699999999888877764 66543 345566666666777999999999766 3


Q ss_pred             hHHHHh-ccccCCeEEEE
Q 018382          258 LEPYLS-LLKLDGKLILT  274 (357)
Q Consensus       258 ~~~~~~-~l~~~G~~v~~  274 (357)
                      .....+ +.+.+-.++.+
T Consensus        82 ~~~~~~~~~~~g~~~~~~   99 (118)
T 3ic5_A           82 TPIIAKAAKAAGAHYFDL   99 (118)
T ss_dssp             HHHHHHHHHHTTCEEECC
T ss_pred             hHHHHHHHHHhCCCEEEe
Confidence            333333 34444455443

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=98.13  E-value=1e-05  Score=70.98  Aligned_cols=99  Identities=18%  Similarity=0.224  Sum_probs=75.5

Q ss_pred             CCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcE---EEcCCChhHHHHh-------hCCccE
Q 018382          179 QSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQ---YLVSSDATRMQEA-------ADSLDY  247 (357)
Q Consensus       179 ~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~-------~~~~d~  247 (357)
                      -+|+++||+|+ +++|.+.++.+...|++|+++.+++++.+.+.+++|...   ..|..+++.++++       .+++|+
T Consensus        27 L~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDi  106 (273)
T 4fgs_A           27 LNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAGRIDV  106 (273)
T ss_dssp             TTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCEEE
T ss_pred             hCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            36899999987 999999999999999999999999999888877788432   2455665444333       247999


Q ss_pred             EEEcCCCC-------------------------CChHHHHhccccCCeEEEEccC
Q 018382          248 IIDTVPAN-------------------------HPLEPYLSLLKLDGKLILTGVI  277 (357)
Q Consensus       248 v~d~~g~~-------------------------~~~~~~~~~l~~~G~~v~~g~~  277 (357)
                      +++++|..                         ...+.++..|+++|+++.++..
T Consensus       107 LVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~  161 (273)
T 4fgs_A          107 LFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGST  161 (273)
T ss_dssp             EEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCG
T ss_pred             EEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeeh
Confidence            99998764                         1334455678888999988654

>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33

Probab=98.12  E-value=1.9e-06  Score=75.60  Aligned_cols=96  Identities=18%  Similarity=0.094  Sum_probs=69.6

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHc-CCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCCC
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAM-GHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHP  257 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~-g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~  257 (357)
                      .++.+||.+|+|. |..+..+++.. +.+|++++.+++..+.+++......++..+..+ +....+.+|+|+...... .
T Consensus        84 ~~~~~vLdiG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~-~~~~~~~fD~v~~~~~~~-~  160 (269)
T 1p91_A           84 DKATAVLDIGCGE-GYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSHR-LPFSDTSMDAIIRIYAPC-K  160 (269)
T ss_dssp             TTCCEEEEETCTT-STTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCTTSEEEECCTTS-CSBCTTCEEEEEEESCCC-C
T ss_pred             CCCCEEEEECCCC-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhCCCcEEEEcchhh-CCCCCCceeEEEEeCChh-h
Confidence            5788999999987 88888999886 679999999999888888744322333222111 111124799999654444 8


Q ss_pred             hHHHHhccccCCeEEEEccC
Q 018382          258 LEPYLSLLKLDGKLILTGVI  277 (357)
Q Consensus       258 ~~~~~~~l~~~G~~v~~g~~  277 (357)
                      +..+.+.|+|+|+++.....
T Consensus       161 l~~~~~~L~pgG~l~~~~~~  180 (269)
T 1p91_A          161 AEELARVVKPGGWVITATPG  180 (269)
T ss_dssp             HHHHHHHEEEEEEEEEEEEC
T ss_pred             HHHHHHhcCCCcEEEEEEcC
Confidence            89999999999999877543

>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*

Probab=98.11  E-value=1.9e-05  Score=72.86  Aligned_cols=103  Identities=20%  Similarity=0.194  Sum_probs=79.5

Q ss_pred             hhhhhhcc-CCCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCcc
Q 018382          168 VFSPLSHF-GLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLD  246 (357)
Q Consensus       168 a~~~l~~~-~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d  246 (357)
                      .+.++.++ +..-.|++|+|+|.|.+|...++.++.+|++|+++.+++.+...+.. .|... .      .++++....|
T Consensus       206 ~~~gi~rat~~~L~GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp~ra~~A~~-~G~~v-~------~Leeal~~AD  277 (435)
T 3gvp_A          206 ILDGLKRTTDMMFGGKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDPICALQACM-DGFRL-V------KLNEVIRQVD  277 (435)
T ss_dssp             HHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-TTCEE-C------CHHHHTTTCS
T ss_pred             HHHHHHHhhCceecCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCChhhhHHHHH-cCCEe-c------cHHHHHhcCC
Confidence            34444443 33358999999999999999999999999999999988776655555 67532 1      2455667899


Q ss_pred             EEEEcCCCCCChH-HHHhccccCCeEEEEccCC
Q 018382          247 YIIDTVPANHPLE-PYLSLLKLDGKLILTGVIN  278 (357)
Q Consensus       247 ~v~d~~g~~~~~~-~~~~~l~~~G~~v~~g~~~  278 (357)
                      +++.|.+....+. ..++.|++++.++.++-..
T Consensus       278 IVi~atgt~~lI~~e~l~~MK~gailINvgrg~  310 (435)
T 3gvp_A          278 IVITCTGNKNVVTREHLDRMKNSCIVCNMGHSN  310 (435)
T ss_dssp             EEEECSSCSCSBCHHHHHHSCTTEEEEECSSTT
T ss_pred             EEEECCCCcccCCHHHHHhcCCCcEEEEecCCC
Confidence            9999988776665 8899999999999987654

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=98.06  E-value=4.2e-05  Score=68.26  Aligned_cols=100  Identities=21%  Similarity=0.237  Sum_probs=77.5

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCCCh
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPL  258 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~~  258 (357)
                      -++++|+|+|+|.+|..+++.++..|++|++.+++.++.+.+.+ +|.. +++.   ..+.++....|+|+.+++....-
T Consensus       155 l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~-~g~~-~~~~---~~l~~~l~~aDvVi~~~p~~~i~  229 (300)
T 2rir_A          155 IHGSQVAVLGLGRTGMTIARTFAALGANVKVGARSSAHLARITE-MGLV-PFHT---DELKEHVKDIDICINTIPSMILN  229 (300)
T ss_dssp             STTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-TTCE-EEEG---GGHHHHSTTCSEEEECCSSCCBC
T ss_pred             CCCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-CCCe-EEch---hhHHHHhhCCCEEEECCChhhhC
Confidence            47899999999999999999999999999999999877766666 7764 2322   23455667899999999876333


Q ss_pred             HHHHhccccCCeEEEEccCCCCccc
Q 018382          259 EPYLSLLKLDGKLILTGVINTPMQF  283 (357)
Q Consensus       259 ~~~~~~l~~~G~~v~~g~~~~~~~~  283 (357)
                      ...++.|++++.++.++.......+
T Consensus       230 ~~~~~~mk~g~~lin~a~g~~~~~~  254 (300)
T 2rir_A          230 QTVLSSMTPKTLILDLASRPGGTDF  254 (300)
T ss_dssp             HHHHTTSCTTCEEEECSSTTCSBCH
T ss_pred             HHHHHhCCCCCEEEEEeCCCCCcCH
Confidence            5677889999999998764433433

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=98.04  E-value=6.5e-06  Score=65.92  Aligned_cols=89  Identities=13%  Similarity=0.120  Sum_probs=64.7

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEE-cCCChhHHHHh-hCCccEEEEcCCCCC
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYL-VSSDATRMQEA-ADSLDYIIDTVPANH  256 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv-~~~~~~~~~~~-~~~~d~v~d~~g~~~  256 (357)
                      .++++|+|+|+|.+|..+++.++..|.+|+++++++++.+.+.+..|...+. +..+.+.+.+. ..++|+||.+++...
T Consensus        17 ~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~~~~~~   96 (155)
T 2g1u_A           17 QKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEYAFHRLNSEFSGFTVVGDAAEFETLKECGMEKADMVFAFTNDDS   96 (155)
T ss_dssp             CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCTTCCSEEEESCTTSHHHHHTTTGGGCSEEEECSSCHH
T ss_pred             cCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHhcCCCcEEEecCCCHHHHHHcCcccCCEEEEEeCCcH
Confidence            6788999999999999999999999999999999988877665226765432 33334444443 347999999999863


Q ss_pred             ChHHHHhcccc
Q 018382          257 PLEPYLSLLKL  267 (357)
Q Consensus       257 ~~~~~~~~l~~  267 (357)
                      ....+...++.
T Consensus        97 ~~~~~~~~~~~  107 (155)
T 2g1u_A           97 TNFFISMNARY  107 (155)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            44444444444

>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13

Probab=97.95  E-value=2.9e-05  Score=68.43  Aligned_cols=186  Identities=18%  Similarity=0.130  Sum_probs=101.5

Q ss_pred             eCCCCCCCCCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCc--ceEECCCCCCc
Q 018382           78 VGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQK--FVVKIPDGMAL  155 (357)
Q Consensus        78 vG~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~--~~~~lP~~l~~  155 (357)
                      +|+....++.||+|.+... ..+.++..+..+..-.+..+.+....+      ....+.+.+.++..  ....-|+...+
T Consensus        13 ~~~~~~~~~~gd~v~i~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~i------~g~~~g~~~~~~~~~~~~~~~p~~~~~   85 (277)
T 1o54_A           13 VGKVADTLKPGDRVLLSFE-DESEFLVDLEKDKKLHTHLGIIDLNEV------FEKGPGEIIRTSAGKKGYILIPSLIDE   85 (277)
T ss_dssp             CCCGGGCCCTTCEEEEEET-TSCEEEEECCTTCEEEETTEEEEHHHH------TTSCTTCEEECTTCCEEEEECCCHHHH
T ss_pred             cccccCCCCCCCEEEEEEC-CCcEEEEEEcCCCEEecCCceEEHHHh------cCCCCCcEEEEcCCcEEEEeCCCHHHH
Confidence            4566667999999977532 123333334444333333333322111      01123344444433  33434442222


Q ss_pred             cccc----cccchhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHc--CCeEEEEeCCcHHHHHHHHhc---CC
Q 018382          156 EQAA----PLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAM--GHHVTVISSSDKKRVEAMEHL---GA  226 (357)
Q Consensus       156 ~~aa----~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~--g~~V~~~~~~~~~~~~~~~~~---g~  226 (357)
                      .++.    ..... ..+...+... .+.++++||-+|+|. |..++.+++..  +.+|+.++.+++..+.+++.+   |.
T Consensus        86 ~~~~~~~~~~~~~-~~~~~i~~~~-~~~~~~~VLDiG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~  162 (277)
T 1o54_A           86 IMNMKRRTQIVYP-KDSSFIAMML-DVKEGDRIIDTGVGS-GAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGL  162 (277)
T ss_dssp             HHTCCC-CCCCCH-HHHHHHHHHT-TCCTTCEEEEECCTT-SHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTC
T ss_pred             HhhccccCCccCH-HHHHHHHHHh-CCCCCCEEEEECCcC-CHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCC
Confidence            1111    00000 1111223333 348899999999876 88888888885  469999999988777666532   43


Q ss_pred             --c-EEEcCCChhHHHHhh-CCccEEEEcCCCC-CChHHHHhccccCCeEEEEcc
Q 018382          227 --D-QYLVSSDATRMQEAA-DSLDYIIDTVPAN-HPLEPYLSLLKLDGKLILTGV  276 (357)
Q Consensus       227 --~-~vv~~~~~~~~~~~~-~~~d~v~d~~g~~-~~~~~~~~~l~~~G~~v~~g~  276 (357)
                        . .++..+-.+   .+. +.+|+|+...... ..+..+.+.|+++|.++....
T Consensus       163 ~~~v~~~~~d~~~---~~~~~~~D~V~~~~~~~~~~l~~~~~~L~pgG~l~~~~~  214 (277)
T 1o54_A          163 IERVTIKVRDISE---GFDEKDVDALFLDVPDPWNYIDKCWEALKGGGRFATVCP  214 (277)
T ss_dssp             GGGEEEECCCGGG---CCSCCSEEEEEECCSCGGGTHHHHHHHEEEEEEEEEEES
T ss_pred             CCCEEEEECCHHH---cccCCccCEEEECCcCHHHHHHHHHHHcCCCCEEEEEeC
Confidence              1 222221111   122 3699998766553 467888999999999987743

>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}

Probab=97.93  E-value=4.6e-05  Score=70.49  Aligned_cols=102  Identities=16%  Similarity=0.154  Sum_probs=77.5

Q ss_pred             hhhhhc-cCCCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccE
Q 018382          169 FSPLSH-FGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDY  247 (357)
Q Consensus       169 ~~~l~~-~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~  247 (357)
                      +.++.+ .+..-.|++|+|+|.|.+|..+++.++.+|++|+++.+++.+...+.. .|... ++      ++++....|+
T Consensus       234 vdgI~Ratg~~L~GKTVgVIG~G~IGr~vA~~lrafGa~Viv~d~dp~~a~~A~~-~G~~v-v~------LeElL~~ADI  305 (464)
T 3n58_A          234 VDGIRRGTDVMMAGKVAVVCGYGDVGKGSAQSLAGAGARVKVTEVDPICALQAAM-DGFEV-VT------LDDAASTADI  305 (464)
T ss_dssp             HHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHH-TTCEE-CC------HHHHGGGCSE
T ss_pred             HHHHHHhcCCcccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCcchhhHHHh-cCcee-cc------HHHHHhhCCE
Confidence            344433 334468999999999999999999999999999999887766555544 66542 21      3455568999


Q ss_pred             EEEcCCCCCCh-HHHHhccccCCeEEEEccCC
Q 018382          248 IIDTVPANHPL-EPYLSLLKLDGKLILTGVIN  278 (357)
Q Consensus       248 v~d~~g~~~~~-~~~~~~l~~~G~~v~~g~~~  278 (357)
                      |+.+.+....+ ...++.|++++.++.+|-..
T Consensus       306 Vv~atgt~~lI~~e~l~~MK~GAILINvGRgd  337 (464)
T 3n58_A          306 VVTTTGNKDVITIDHMRKMKDMCIVGNIGHFD  337 (464)
T ss_dssp             EEECCSSSSSBCHHHHHHSCTTEEEEECSSST
T ss_pred             EEECCCCccccCHHHHhcCCCCeEEEEcCCCC
Confidence            99999876555 57899999999999887543

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=97.92  E-value=2.9e-05  Score=73.01  Aligned_cols=91  Identities=18%  Similarity=0.192  Sum_probs=73.3

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCCCh
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPL  258 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~~  258 (357)
                      -.|++|+|+|+|++|.++++.++..|++|+++.+++.+...+.. .|.+ +.+      .++....+|+++++.|....+
T Consensus       263 L~GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~-~g~d-v~~------lee~~~~aDvVi~atG~~~vl  334 (488)
T 3ond_A          263 IAGKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDPICALQATM-EGLQ-VLT------LEDVVSEADIFVTTTGNKDII  334 (488)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-TTCE-ECC------GGGTTTTCSEEEECSSCSCSB
T ss_pred             ccCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH-hCCc-cCC------HHHHHHhcCEEEeCCCChhhh
Confidence            47899999999999999999999999999999998877776666 6653 211      123445799999999986555


Q ss_pred             H-HHHhccccCCeEEEEccC
Q 018382          259 E-PYLSLLKLDGKLILTGVI  277 (357)
Q Consensus       259 ~-~~~~~l~~~G~~v~~g~~  277 (357)
                      . ..++.+++++.++.+|..
T Consensus       335 ~~e~l~~mk~gaiVvNaG~~  354 (488)
T 3ond_A          335 MLDHMKKMKNNAIVCNIGHF  354 (488)
T ss_dssp             CHHHHTTSCTTEEEEESSST
T ss_pred             hHHHHHhcCCCeEEEEcCCC
Confidence            4 488999999999998864

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.92  E-value=5.7e-05  Score=62.09  Aligned_cols=93  Identities=14%  Similarity=0.150  Sum_probs=68.9

Q ss_pred             CCeEEEEecChHHHHHHHHHHHc-CCeEEEEeCCcHHHHHHHHhcCCcEEE-cCCChhHHHHh--hCCccEEEEcCCCCC
Q 018382          181 GLRGGILGLGGVGHMGVLIAKAM-GHHVTVISSSDKKRVEAMEHLGADQYL-VSSDATRMQEA--ADSLDYIIDTVPANH  256 (357)
Q Consensus       181 ~~~VlI~G~g~~G~~ai~la~~~-g~~V~~~~~~~~~~~~~~~~~g~~~vv-~~~~~~~~~~~--~~~~d~v~d~~g~~~  256 (357)
                      +++|+|+|+|.+|..+++.++.. |.+|+++++++++.+.+.+ .|...+. |..+.+.+.+.  ..++|+|+.+++...
T Consensus        39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~-~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~~~~~  117 (183)
T 3c85_A           39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIREEAAQQHRS-EGRNVISGDATDPDFWERILDTGHVKLVLLAMPHHQ  117 (183)
T ss_dssp             TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHH-TTCCEEECCTTCHHHHHTBCSCCCCCEEEECCSSHH
T ss_pred             CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHH-CCCCEEEcCCCCHHHHHhccCCCCCCEEEEeCCChH
Confidence            66899999999999999999998 9999999999998888777 7876543 55555666665  458999999988753


Q ss_pred             ChHHHHhc---cccCCeEEEE
Q 018382          257 PLEPYLSL---LKLDGKLILT  274 (357)
Q Consensus       257 ~~~~~~~~---l~~~G~~v~~  274 (357)
                      ....+...   +.+...++..
T Consensus       118 ~~~~~~~~~~~~~~~~~ii~~  138 (183)
T 3c85_A          118 GNQTALEQLQRRNYKGQIAAI  138 (183)
T ss_dssp             HHHHHHHHHHHTTCCSEEEEE
T ss_pred             HHHHHHHHHHHHCCCCEEEEE
Confidence            33333333   3444565543

>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*

Probab=97.85  E-value=0.00012  Score=67.67  Aligned_cols=90  Identities=14%  Similarity=0.203  Sum_probs=72.8

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCCCh
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPL  258 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~~  258 (357)
                      -.|++|+|+|.|.+|..+++.++.+|++|+++.+++.+...+.. .|....       .++++....|+++.+.+....+
T Consensus       209 L~GktVgIiG~G~IG~~vA~~Lka~Ga~Viv~D~~p~~a~~A~~-~G~~~~-------sL~eal~~ADVVilt~gt~~iI  280 (436)
T 3h9u_A          209 IAGKTACVCGYGDVGKGCAAALRGFGARVVVTEVDPINALQAAM-EGYQVL-------LVEDVVEEAHIFVTTTGNDDII  280 (436)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-TTCEEC-------CHHHHTTTCSEEEECSSCSCSB
T ss_pred             ccCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCChhhhHHHHH-hCCeec-------CHHHHHhhCCEEEECCCCcCcc
Confidence            46899999999999999999999999999999988776655555 675321       2456667899999988876555


Q ss_pred             H-HHHhccccCCeEEEEcc
Q 018382          259 E-PYLSLLKLDGKLILTGV  276 (357)
Q Consensus       259 ~-~~~~~l~~~G~~v~~g~  276 (357)
                      . ..++.|+++..++.++-
T Consensus       281 ~~e~l~~MK~gAIVINvgR  299 (436)
T 3h9u_A          281 TSEHFPRMRDDAIVCNIGH  299 (436)
T ss_dssp             CTTTGGGCCTTEEEEECSS
T ss_pred             CHHHHhhcCCCcEEEEeCC
Confidence            4 67889999999988863

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=97.84  E-value=7.8e-05  Score=64.80  Aligned_cols=99  Identities=14%  Similarity=0.210  Sum_probs=71.9

Q ss_pred             CCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcE---EEcCCChhHHHHh-------hCCccE
Q 018382          179 QSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQ---YLVSSDATRMQEA-------ADSLDY  247 (357)
Q Consensus       179 ~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~-------~~~~d~  247 (357)
                      -.++++||+|+ +++|.++++.+...|++|+++++++++.+.+.++++...   ..|..+.+.++++       .+++|+
T Consensus         6 l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   85 (255)
T 4eso_A            6 YQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAIDL   85 (255)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSEEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            35789999987 999999999999999999999999988887777666432   2355555443332       247999


Q ss_pred             EEEcCCCCC-------------------------ChHHHHhccccCCeEEEEccC
Q 018382          248 IIDTVPANH-------------------------PLEPYLSLLKLDGKLILTGVI  277 (357)
Q Consensus       248 v~d~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~~  277 (357)
                      +++++|...                         ..+.+...++++|+++.++..
T Consensus        86 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~  140 (255)
T 4eso_A           86 LHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSV  140 (255)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCG
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECCh
Confidence            999987631                         122344456678999988754

>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*

Probab=97.83  E-value=2.9e-05  Score=68.54  Aligned_cols=98  Identities=16%  Similarity=0.284  Sum_probs=71.5

Q ss_pred             cCCCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCCc--EEEcCCChhHHHHhhCCccEEE
Q 018382          175 FGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGAD--QYLVSSDATRMQEAADSLDYII  249 (357)
Q Consensus       175 ~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~~--~vv~~~~~~~~~~~~~~~d~v~  249 (357)
                      ...++++++||.+|+|..++.++.+++..|++|++++.+++..+.+++.   .|.+  .++..+..+ +.  .+.||+||
T Consensus       117 la~l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~-l~--d~~FDvV~  193 (298)
T 3fpf_A          117 LGRFRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETV-ID--GLEFDVLM  193 (298)
T ss_dssp             HTTCCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGG-GG--GCCCSEEE
T ss_pred             HcCCCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhh-CC--CCCcCEEE
Confidence            3455899999999998877888888888899999999999988777663   3432  222222222 11  46899999


Q ss_pred             EcCCCC---CChHHHHhccccCCeEEEEc
Q 018382          250 DTVPAN---HPLEPYLSLLKLDGKLILTG  275 (357)
Q Consensus       250 d~~g~~---~~~~~~~~~l~~~G~~v~~g  275 (357)
                      ......   ..++.+.+.|+|+|+++...
T Consensus       194 ~~a~~~d~~~~l~el~r~LkPGG~Lvv~~  222 (298)
T 3fpf_A          194 VAALAEPKRRVFRNIHRYVDTETRIIYRT  222 (298)
T ss_dssp             ECTTCSCHHHHHHHHHHHCCTTCEEEEEE
T ss_pred             ECCCccCHHHHHHHHHHHcCCCcEEEEEc
Confidence            765543   25778889999999998764

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=97.80  E-value=0.00013  Score=65.11  Aligned_cols=110  Identities=12%  Similarity=0.096  Sum_probs=71.9

Q ss_pred             hhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCC---cHHHHHHHHhcC----C-cEEEcCCChhHHH
Q 018382          169 FSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSS---DKKRVEAMEHLG----A-DQYLVSSDATRMQ  239 (357)
Q Consensus       169 ~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~---~~~~~~~~~~~g----~-~~vv~~~~~~~~~  239 (357)
                      ..+|...+.--.++++||+|+|++|.+++..+...|+ +|+++.|+   .++.+.+.++++    . ..+++..+.+.+.
T Consensus       142 ~~~L~~~~~~l~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~  221 (315)
T 3tnl_A          142 MRALKEAGHDIIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLR  221 (315)
T ss_dssp             HHHHHHTTCCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHH
T ss_pred             HHHHHHcCCCccCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHH
Confidence            3344443332468899999999999999999999999 89999999   777666554343    2 2344555444444


Q ss_pred             HhhCCccEEEEcCCCCCC-----hHH-HHhccccCCeEEEEccCC
Q 018382          240 EAADSLDYIIDTVPANHP-----LEP-YLSLLKLDGKLILTGVIN  278 (357)
Q Consensus       240 ~~~~~~d~v~d~~g~~~~-----~~~-~~~~l~~~G~~v~~g~~~  278 (357)
                      +....+|+||++++....     ... ....++++..++++-..+
T Consensus       222 ~~l~~aDiIINaTp~Gm~~~~~~~p~~~~~~l~~~~~V~DlvY~P  266 (315)
T 3tnl_A          222 KEIAESVIFTNATGVGMKPFEGETLLPSADMLRPELIVSDVVYKP  266 (315)
T ss_dssp             HHHHTCSEEEECSSTTSTTSTTCCSCCCGGGCCTTCEEEESCCSS
T ss_pred             hhhcCCCEEEECccCCCCCCCCCCCCCcHHHcCCCCEEEEeccCC
Confidence            455689999999864311     001 234566666666664443

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=97.76  E-value=0.00014  Score=64.40  Aligned_cols=76  Identities=16%  Similarity=0.191  Sum_probs=59.1

Q ss_pred             CCCCeEEEEe-cChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc----CC-cEEEcCCChhHHHHhhCCccEEEEcC
Q 018382          179 QSGLRGGILG-LGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL----GA-DQYLVSSDATRMQEAADSLDYIIDTV  252 (357)
Q Consensus       179 ~~~~~VlI~G-~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~----g~-~~vv~~~~~~~~~~~~~~~d~v~d~~  252 (357)
                      -+++++||+| +|++|.+++..+...|++|+++.++.++.+.+.+.+    +. ....|..+.+.+++....+|++++++
T Consensus       117 l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~DvlVn~a  196 (287)
T 1lu9_A          117 VKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVFTAG  196 (287)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEEECC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHhCCEEEECC
Confidence            4678999998 599999999999999999999999988776555433    32 23356666666666667899999999


Q ss_pred             CC
Q 018382          253 PA  254 (357)
Q Consensus       253 g~  254 (357)
                      +.
T Consensus       197 g~  198 (287)
T 1lu9_A          197 AI  198 (287)
T ss_dssp             CT
T ss_pred             Cc
Confidence            74

>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13

Probab=97.76  E-value=0.00013  Score=66.15  Aligned_cols=103  Identities=17%  Similarity=0.168  Sum_probs=65.9

Q ss_pred             hhccCCCCCCCeEEEEecChHHHHHHHHHHHcC--CeEEEEeCCcHHHHHHHHhcC----------------CcEEEcCC
Q 018382          172 LSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMG--HHVTVISSSDKKRVEAMEHLG----------------ADQYLVSS  233 (357)
Q Consensus       172 l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g--~~V~~~~~~~~~~~~~~~~~g----------------~~~vv~~~  233 (357)
                      +..+. +.++++||-+|+|. |..++.+++..|  .+|+.++.++...+.+++.+.                .-.++..+
T Consensus        98 l~~l~-~~~g~~VLDiG~G~-G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d  175 (336)
T 2b25_A           98 LSMMD-INPGDTVLEAGSGS-GGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKD  175 (336)
T ss_dssp             HHHHT-CCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESC
T ss_pred             HHhcC-CCCCCEEEEeCCCc-CHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECC
Confidence            33343 48999999999876 777888888766  689999999887776665321                11222222


Q ss_pred             ChhHHHHhh-CCccEEEEcCCCC-CChHHHHhccccCCeEEEEcc
Q 018382          234 DATRMQEAA-DSLDYIIDTVPAN-HPLEPYLSLLKLDGKLILTGV  276 (357)
Q Consensus       234 ~~~~~~~~~-~~~d~v~d~~g~~-~~~~~~~~~l~~~G~~v~~g~  276 (357)
                      -.+....+. +.+|+|+-..... ..+..+.+.|+++|+++....
T Consensus       176 ~~~~~~~~~~~~fD~V~~~~~~~~~~l~~~~~~LkpgG~lv~~~~  220 (336)
T 2b25_A          176 ISGATEDIKSLTFDAVALDMLNPHVTLPVFYPHLKHGGVCAVYVV  220 (336)
T ss_dssp             TTCCC-------EEEEEECSSSTTTTHHHHGGGEEEEEEEEEEES
T ss_pred             hHHcccccCCCCeeEEEECCCCHHHHHHHHHHhcCCCcEEEEEeC
Confidence            111111222 3699998654443 357889999999999987644

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.68  E-value=0.00038  Score=54.38  Aligned_cols=94  Identities=21%  Similarity=0.162  Sum_probs=69.6

Q ss_pred             CCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEE-cCCChhHHHHhh-CCccEEEEcCCCCCC
Q 018382          180 SGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYL-VSSDATRMQEAA-DSLDYIIDTVPANHP  257 (357)
Q Consensus       180 ~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv-~~~~~~~~~~~~-~~~d~v~d~~g~~~~  257 (357)
                      -.++|+|+|.|.+|..+++.++..|.+|+++++++++.+.+.+ .|...+. |..+++.+++.. ..+|+++.+++....
T Consensus         6 ~~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~-~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~~~~   84 (140)
T 3fwz_A            6 ICNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRVDELRE-RGVRAVLGNAANEEIMQLAHLECAKWLILTIPNGYE   84 (140)
T ss_dssp             CCSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH-TTCEEEESCTTSHHHHHHTTGGGCSEEEECCSCHHH
T ss_pred             CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH-cCCCEEECCCCCHHHHHhcCcccCCEEEEECCChHH
Confidence            3568999999999999999999999999999999999888887 7876543 445556665543 479999999887522


Q ss_pred             hH---HHHhccccCCeEEEE
Q 018382          258 LE---PYLSLLKLDGKLILT  274 (357)
Q Consensus       258 ~~---~~~~~l~~~G~~v~~  274 (357)
                      ..   ...+.+.+..+++..
T Consensus        85 n~~~~~~a~~~~~~~~iiar  104 (140)
T 3fwz_A           85 AGEIVASARAKNPDIEIIAR  104 (140)
T ss_dssp             HHHHHHHHHHHCSSSEEEEE
T ss_pred             HHHHHHHHHHHCCCCeEEEE
Confidence            22   234445566665543

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=97.64  E-value=0.00051  Score=60.00  Aligned_cols=76  Identities=22%  Similarity=0.359  Sum_probs=58.8

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEE---EcCCChhHHHHhh-------CCccEE
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQY---LVSSDATRMQEAA-------DSLDYI  248 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~v---v~~~~~~~~~~~~-------~~~d~v  248 (357)
                      .++++||+|+ |++|.++++.+...|++|+++.+++++.+.+.+.++....   .|..+.+.++++.       +++|++
T Consensus        26 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  105 (266)
T 3grp_A           26 TGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREMEGIDIL  105 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTSCCEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHHcCCCCEE
Confidence            5789999987 9999999999999999999999999888777766775432   3555554443332       379999


Q ss_pred             EEcCCCC
Q 018382          249 IDTVPAN  255 (357)
Q Consensus       249 ~d~~g~~  255 (357)
                      ++++|..
T Consensus       106 vnnAg~~  112 (266)
T 3grp_A          106 VNNAGIT  112 (266)
T ss_dssp             EECCCCC
T ss_pred             EECCCCC
Confidence            9999863

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=97.64  E-value=0.00034  Score=61.32  Aligned_cols=75  Identities=15%  Similarity=0.162  Sum_probs=57.1

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCc-E--EEcCCChhHHHHhh-------CCccEE
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGAD-Q--YLVSSDATRMQEAA-------DSLDYI  248 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~-~--vv~~~~~~~~~~~~-------~~~d~v  248 (357)
                      .++++||+|+ |++|.++++.+...|++|+++++++++.+.+.+.++.. .  ..|..+.+.++++.       +++|++
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  106 (272)
T 4dyv_A           27 GKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEKFGRVDVL  106 (272)
T ss_dssp             -CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            5688999987 99999999999889999999999988887777666632 2  23666654444332       379999


Q ss_pred             EEcCCC
Q 018382          249 IDTVPA  254 (357)
Q Consensus       249 ~d~~g~  254 (357)
                      ++++|.
T Consensus       107 VnnAg~  112 (272)
T 4dyv_A          107 FNNAGT  112 (272)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999986

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=97.63  E-value=0.00033  Score=60.81  Aligned_cols=75  Identities=9%  Similarity=0.174  Sum_probs=54.3

Q ss_pred             CCCeEEEEec-C--hHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHH---hcCC--cE--EEcCCChhHHHHh-------h
Q 018382          180 SGLRGGILGL-G--GVGHMGVLIAKAMGHHVTVISSSDKKRVEAME---HLGA--DQ--YLVSSDATRMQEA-------A  242 (357)
Q Consensus       180 ~~~~VlI~G~-g--~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~---~~g~--~~--vv~~~~~~~~~~~-------~  242 (357)
                      .|+++||+|+ |  ++|++.++.+...|++|+++.++++..+.+.+   +++.  .+  ..|..+++.++++       .
T Consensus         5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   84 (256)
T 4fs3_A            5 ENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKDV   84 (256)
T ss_dssp             TTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            5899999986 4  89999999999999999999999876655543   2342  12  2466665443332       2


Q ss_pred             CCccEEEEcCCC
Q 018382          243 DSLDYIIDTVPA  254 (357)
Q Consensus       243 ~~~d~v~d~~g~  254 (357)
                      +++|++++++|.
T Consensus        85 G~iD~lvnnAg~   96 (256)
T 4fs3_A           85 GNIDGVYHSIAF   96 (256)
T ss_dssp             CCCSEEEECCCC
T ss_pred             CCCCEEEecccc
Confidence            479999999874

>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13

Probab=97.62  E-value=0.00022  Score=62.66  Aligned_cols=98  Identities=21%  Similarity=0.221  Sum_probs=67.3

Q ss_pred             CCCCCCeEEEEecChHHHHHHHHHHHc--CCeEEEEeCCcHHHHHHHHhc----C--Cc--EEEcCCChhHHHHhhCCcc
Q 018382          177 LKQSGLRGGILGLGGVGHMGVLIAKAM--GHHVTVISSSDKKRVEAMEHL----G--AD--QYLVSSDATRMQEAADSLD  246 (357)
Q Consensus       177 ~~~~~~~VlI~G~g~~G~~ai~la~~~--g~~V~~~~~~~~~~~~~~~~~----g--~~--~vv~~~~~~~~~~~~~~~d  246 (357)
                      .++++++||.+|+| .|..++.+++..  +.+|+.++.+++..+.+++.+    |  .+  .++. .+........+.+|
T Consensus        96 ~~~~~~~vLdiG~G-~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~-~d~~~~~~~~~~~D  173 (280)
T 1i9g_A           96 DIFPGARVLEAGAG-SGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVV-SDLADSELPDGSVD  173 (280)
T ss_dssp             TCCTTCEEEEECCT-TSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEEC-SCGGGCCCCTTCEE
T ss_pred             CCCCCCEEEEEccc-ccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEE-CchHhcCCCCCcee
Confidence            34899999999987 688888888875  459999999988877766543    4  21  2222 22111100124799


Q ss_pred             EEEEcCCCC-CChHHHHhccccCCeEEEEcc
Q 018382          247 YIIDTVPAN-HPLEPYLSLLKLDGKLILTGV  276 (357)
Q Consensus       247 ~v~d~~g~~-~~~~~~~~~l~~~G~~v~~g~  276 (357)
                      +|+...... ..+..+.+.|+++|+++....
T Consensus       174 ~v~~~~~~~~~~l~~~~~~L~pgG~l~~~~~  204 (280)
T 1i9g_A          174 RAVLDMLAPWEVLDAVSRLLVAGGVLMVYVA  204 (280)
T ss_dssp             EEEEESSCGGGGHHHHHHHEEEEEEEEEEES
T ss_pred             EEEECCcCHHHHHHHHHHhCCCCCEEEEEeC
Confidence            998765543 467788999999999987643

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.59  E-value=0.00027  Score=62.78  Aligned_cols=96  Identities=14%  Similarity=0.054  Sum_probs=69.3

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCc--EEEcCCChhHHHHhhCCccEEEEcCCCC
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGAD--QYLVSSDATRMQEAADSLDYIIDTVPAN  255 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~--~vv~~~~~~~~~~~~~~~d~v~d~~g~~  255 (357)
                      -++++++|+|+|++|.+++..+...|+ +|++..++.++.+.+.+.++..  .+++.   +.+.+....+|+|++|++..
T Consensus       139 l~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~~~~~~---~~~~~~~~~aDivIn~t~~~  215 (297)
T 2egg_A          139 LDGKRILVIGAGGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRSAYFSL---AEAETRLAEYDIIINTTSVG  215 (297)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSCCEECH---HHHHHTGGGCSEEEECSCTT
T ss_pred             CCCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccCceeeH---HHHHhhhccCCEEEECCCCC
Confidence            367899999999999999999999998 9999999988887777767752  23221   23344456899999999875


Q ss_pred             CCh-----HHHHhccccCCeEEEEccC
Q 018382          256 HPL-----EPYLSLLKLDGKLILTGVI  277 (357)
Q Consensus       256 ~~~-----~~~~~~l~~~G~~v~~g~~  277 (357)
                      ..-     ......++++..++++...
T Consensus       216 ~~~~~~~~~i~~~~l~~~~~v~D~~y~  242 (297)
T 2egg_A          216 MHPRVEVQPLSLERLRPGVIVSDIIYN  242 (297)
T ss_dssp             CSSCCSCCSSCCTTCCTTCEEEECCCS
T ss_pred             CCCCCCCCCCCHHHcCCCCEEEEcCCC
Confidence            210     1123456777777777653

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=97.58  E-value=0.00042  Score=60.96  Aligned_cols=75  Identities=16%  Similarity=0.177  Sum_probs=57.7

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCc---EEEcCCChhHHHHh-------hCCccEE
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGAD---QYLVSSDATRMQEA-------ADSLDYI  248 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~~-------~~~~d~v  248 (357)
                      .++++||+|+ |++|.++++.+...|++|+++++++++.+.+.+.++..   ...|..+.+.++++       .+++|++
T Consensus        28 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  107 (277)
T 3gvc_A           28 AGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAFGGVDKL  107 (277)
T ss_dssp             TTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHHSSCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            5788999987 99999999999889999999999988887776666632   22366665443332       2379999


Q ss_pred             EEcCCC
Q 018382          249 IDTVPA  254 (357)
Q Consensus       249 ~d~~g~  254 (357)
                      ++++|.
T Consensus       108 vnnAg~  113 (277)
T 3gvc_A          108 VANAGV  113 (277)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999986

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=97.57  E-value=0.00086  Score=58.42  Aligned_cols=75  Identities=17%  Similarity=0.198  Sum_probs=56.8

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCc---EEEcCCChhHHHHhh-------CCccEE
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGAD---QYLVSSDATRMQEAA-------DSLDYI  248 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~~~-------~~~d~v  248 (357)
                      .++++||+|+ |++|.++++.+...|++|+++++++++.+.+.+.++..   ...|..+.+.++++.       +++|++
T Consensus         5 ~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~l   84 (263)
T 2a4k_A            5 SGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHGV   84 (263)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHHcCCCcEE
Confidence            4688999987 99999999999989999999999988877776656532   124566654443322       378999


Q ss_pred             EEcCCC
Q 018382          249 IDTVPA  254 (357)
Q Consensus       249 ~d~~g~  254 (357)
                      ++++|.
T Consensus        85 vnnAg~   90 (263)
T 2a4k_A           85 AHFAGV   90 (263)
T ss_dssp             EEGGGG
T ss_pred             EECCCC
Confidence            999874

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=97.57  E-value=0.00015  Score=56.52  Aligned_cols=75  Identities=19%  Similarity=0.288  Sum_probs=55.9

Q ss_pred             CCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEE-EcCCChhHHHHh-hCCccEEEEcCCCC
Q 018382          180 SGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQY-LVSSDATRMQEA-ADSLDYIIDTVPAN  255 (357)
Q Consensus       180 ~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~v-v~~~~~~~~~~~-~~~~d~v~d~~g~~  255 (357)
                      ++++|+|+|+|.+|..+++.+...|.+|+++++++++.+.+.+ .+...+ .+..+.+.+.+. ..++|+|+.+++..
T Consensus         5 ~~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~-~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~   81 (144)
T 2hmt_A            5 KNKQFAVIGLGRFGGSIVKELHRMGHEVLAVDINEEKVNAYAS-YATHAVIANATEENELLSLGIRNFEYVIVAIGAN   81 (144)
T ss_dssp             -CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTT-TCSEEEECCTTCHHHHHTTTGGGCSEEEECCCSC
T ss_pred             cCCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-hCCEEEEeCCCCHHHHHhcCCCCCCEEEECCCCc
Confidence            3567999999999999999999999999999998777665554 455433 244444445444 35799999999874

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=97.57  E-value=0.00039  Score=60.22  Aligned_cols=76  Identities=18%  Similarity=0.196  Sum_probs=55.8

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCCcEE---EcCCChhHHHHh----h---CCc
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGADQY---LVSSDATRMQEA----A---DSL  245 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~~~v---v~~~~~~~~~~~----~---~~~  245 (357)
                      +|+++||+|+ +++|.+.++.+...|++|+++.+++++.+...++   .|.+..   .|..+++.++++    .   +++
T Consensus         8 ~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i   87 (255)
T 4g81_D            8 TGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGIHV   87 (255)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCCCC
Confidence            6789999986 9999999999999999999999998876554432   343322   355555444333    2   379


Q ss_pred             cEEEEcCCCC
Q 018382          246 DYIIDTVPAN  255 (357)
Q Consensus       246 d~v~d~~g~~  255 (357)
                      |++++++|..
T Consensus        88 DiLVNNAG~~   97 (255)
T 4g81_D           88 DILINNAGIQ   97 (255)
T ss_dssp             CEEEECCCCC
T ss_pred             cEEEECCCCC
Confidence            9999998864

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=97.56  E-value=0.00029  Score=62.12  Aligned_cols=75  Identities=17%  Similarity=0.150  Sum_probs=54.1

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc----CCc-E--EEcCCChhHHHHh-------hCC
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL----GAD-Q--YLVSSDATRMQEA-------ADS  244 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~----g~~-~--vv~~~~~~~~~~~-------~~~  244 (357)
                      .++++||+|+ |++|.++++.+...|++|+++++++++.+.+.+.+    +.. .  ..|..+.+.++++       .++
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  111 (281)
T 4dry_A           32 EGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEFAR  111 (281)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            5789999987 99999999999889999999999988766554433    222 2  2466665443333       247


Q ss_pred             ccEEEEcCCC
Q 018382          245 LDYIIDTVPA  254 (357)
Q Consensus       245 ~d~v~d~~g~  254 (357)
                      +|++++++|.
T Consensus       112 iD~lvnnAG~  121 (281)
T 4dry_A          112 LDLLVNNAGS  121 (281)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999985

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=97.51  E-value=0.00024  Score=62.30  Aligned_cols=96  Identities=17%  Similarity=0.118  Sum_probs=65.1

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhh-CCccEEEEcCCCCCC
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAA-DSLDYIIDTVPANHP  257 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~-~~~d~v~d~~g~~~~  257 (357)
                      -++++++|+|+|++|.++++.+...|++|++..++.++.+.+.+.++...-++..+.+   ++. +++|+++++++....
T Consensus       117 l~~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~~~~~~~~~---~~~~~~~DivVn~t~~~~~  193 (271)
T 1nyt_A          117 RPGLRILLIGAGGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSMD---ELEGHEFDLIINATSSGIS  193 (271)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCSG---GGTTCCCSEEEECCSCGGG
T ss_pred             cCCCEEEEECCcHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccCCeeEecHH---HhccCCCCEEEECCCCCCC
Confidence            3678999999999999999999999999999999988877776656641001111111   122 689999999987522


Q ss_pred             hH---HHHhccccCCeEEEEccC
Q 018382          258 LE---PYLSLLKLDGKLILTGVI  277 (357)
Q Consensus       258 ~~---~~~~~l~~~G~~v~~g~~  277 (357)
                      -.   .....++++..++++...
T Consensus       194 ~~~~~i~~~~l~~~~~v~D~~y~  216 (271)
T 1nyt_A          194 GDIPAIPSSLIHPGIYCYDMFYQ  216 (271)
T ss_dssp             TCCCCCCGGGCCTTCEEEESCCC
T ss_pred             CCCCCCCHHHcCCCCEEEEeccC
Confidence            00   112345666667776554

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=97.49  E-value=0.00044  Score=53.94  Aligned_cols=74  Identities=16%  Similarity=0.104  Sum_probs=59.5

Q ss_pred             CCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEE-EcCCChhHHHHhh-CCccEEEEcCCCC
Q 018382          181 GLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQY-LVSSDATRMQEAA-DSLDYIIDTVPAN  255 (357)
Q Consensus       181 ~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~v-v~~~~~~~~~~~~-~~~d~v~d~~g~~  255 (357)
                      ..+++|+|+|.+|..+++.+...|.+|+++++++++.+.+.+ .|...+ .|..+++.+++.. .++|+|+.+++..
T Consensus         6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~-~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~~~   81 (141)
T 3llv_A            6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSKEKIELLED-EGFDAVIADPTDESFYRSLDLEGVSAVLITGSDD   81 (141)
T ss_dssp             CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH-TTCEEEECCTTCHHHHHHSCCTTCSEEEECCSCH
T ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH-CCCcEEECCCCCHHHHHhCCcccCCEEEEecCCH
Confidence            467999999999999999999999999999999998888877 675433 3555566666553 4799999999864

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.49  E-value=0.00082  Score=58.79  Aligned_cols=98  Identities=13%  Similarity=0.040  Sum_probs=68.2

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCC--cEEEcCCChhHHHHhh-CCccEEEEcCCC
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGA--DQYLVSSDATRMQEAA-DSLDYIIDTVPA  254 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~--~~vv~~~~~~~~~~~~-~~~d~v~d~~g~  254 (357)
                      -.+++++|+|+|++|.+++..+...|+ +|++..|+.++.+.+.+.++.  ..++...+      +. ..+|+|+++++.
T Consensus       118 l~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~------l~~~~~DivInaTp~  191 (272)
T 3pwz_A          118 LRNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRISRYEA------LEGQSFDIVVNATSA  191 (272)
T ss_dssp             CTTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEEECSGG------GTTCCCSEEEECSSG
T ss_pred             ccCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeEeeHHH------hcccCCCEEEECCCC
Confidence            368899999999999999999988997 999999999998887776764  23333222      22 689999999865


Q ss_pred             CCC---hHHHHhccccCCeEEEEccCCCCcc
Q 018382          255 NHP---LEPYLSLLKLDGKLILTGVINTPMQ  282 (357)
Q Consensus       255 ~~~---~~~~~~~l~~~G~~v~~g~~~~~~~  282 (357)
                      ...   .....+.++++..++++...+..+.
T Consensus       192 gm~~~~~~i~~~~l~~~~~V~DlvY~P~~T~  222 (272)
T 3pwz_A          192 SLTADLPPLPADVLGEAALAYELAYGKGLTP  222 (272)
T ss_dssp             GGGTCCCCCCGGGGTTCSEEEESSCSCCSCH
T ss_pred             CCCCCCCCCCHHHhCcCCEEEEeecCCCCCH
Confidence            310   0012345777777777654433333

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=97.49  E-value=0.00065  Score=57.30  Aligned_cols=97  Identities=10%  Similarity=0.054  Sum_probs=68.0

Q ss_pred             CeEEEEec-ChHHHHHHHHHH-HcCCeEEEEeCCcH-HHHHHHHhcC-CcE-EEcCCChhHHHHhhCCccEEEEcCCCCC
Q 018382          182 LRGGILGL-GGVGHMGVLIAK-AMGHHVTVISSSDK-KRVEAMEHLG-ADQ-YLVSSDATRMQEAADSLDYIIDTVPANH  256 (357)
Q Consensus       182 ~~VlI~G~-g~~G~~ai~la~-~~g~~V~~~~~~~~-~~~~~~~~~g-~~~-vv~~~~~~~~~~~~~~~d~v~d~~g~~~  256 (357)
                      ++|||+|+ |.+|.++++.+. ..|++|++++++++ +.+.+.+... ... ..|..+.+.+++...++|++|+++|...
T Consensus         6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~~ag~~n   85 (221)
T 3r6d_A            6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVTNAEVVFVGAMESG   85 (221)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHHTTCSEEEESCCCCH
T ss_pred             EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHHHHcCCCEEEEcCCCCC
Confidence            46999987 999999998887 89999999999987 6555542122 221 2366677777777789999999998631


Q ss_pred             C-hHHHHhccccC--CeEEEEccCC
Q 018382          257 P-LEPYLSLLKLD--GKLILTGVIN  278 (357)
Q Consensus       257 ~-~~~~~~~l~~~--G~~v~~g~~~  278 (357)
                      . ...+++.++..  ++++.++...
T Consensus        86 ~~~~~~~~~~~~~~~~~iv~iSs~~  110 (221)
T 3r6d_A           86 SDMASIVKALSRXNIRRVIGVSMAG  110 (221)
T ss_dssp             HHHHHHHHHHHHTTCCEEEEEEETT
T ss_pred             hhHHHHHHHHHhcCCCeEEEEeece
Confidence            1 33444445433  5888876543

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=97.49  E-value=0.00054  Score=59.06  Aligned_cols=75  Identities=17%  Similarity=0.214  Sum_probs=57.9

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEE---EcCCChhHHHHh-------hCCccEE
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQY---LVSSDATRMQEA-------ADSLDYI  248 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~v---v~~~~~~~~~~~-------~~~~d~v  248 (357)
                      .++++||+|+ +++|.++++.+...|++|+++++++++.+.+.+.++....   .|..+.+.++++       .+++|++
T Consensus         5 ~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l   84 (247)
T 3rwb_A            5 AGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALTGGIDIL   84 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHHSCCSEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEE
Confidence            5789999987 9999999999999999999999999888777666764432   355554443332       2379999


Q ss_pred             EEcCCC
Q 018382          249 IDTVPA  254 (357)
Q Consensus       249 ~d~~g~  254 (357)
                      ++++|.
T Consensus        85 v~nAg~   90 (247)
T 3rwb_A           85 VNNASI   90 (247)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999985

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=97.49  E-value=0.00038  Score=59.98  Aligned_cols=75  Identities=13%  Similarity=0.091  Sum_probs=56.5

Q ss_pred             CCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcE--EEcCCChhHHHHh-------hCCccEEEE
Q 018382          181 GLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQ--YLVSSDATRMQEA-------ADSLDYIID  250 (357)
Q Consensus       181 ~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~--vv~~~~~~~~~~~-------~~~~d~v~d  250 (357)
                      +++|||+|+ +++|.+.++.+...|++|+++++++++.+.+.++.+...  ..|..+++.++++       .+++|++++
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDiLVN   81 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLVN   81 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            368999986 999999999999999999999999988887777444222  2455565444433       247999999


Q ss_pred             cCCCC
Q 018382          251 TVPAN  255 (357)
Q Consensus       251 ~~g~~  255 (357)
                      ++|..
T Consensus        82 NAG~~   86 (247)
T 3ged_A           82 NACRG   86 (247)
T ss_dssp             CCCCC
T ss_pred             CCCCC
Confidence            98753

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=97.48  E-value=0.0007  Score=62.03  Aligned_cols=94  Identities=14%  Similarity=0.199  Sum_probs=72.8

Q ss_pred             CeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCCChHHH
Q 018382          182 LRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPY  261 (357)
Q Consensus       182 ~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~  261 (357)
                      -+|+|+|+|.+|..+++.+.. ..+|.+++++.++.+.+.+ ......+|..+.+.+.++..+.|+|+++++.......+
T Consensus        17 mkilvlGaG~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~~-~~~~~~~d~~d~~~l~~~~~~~DvVi~~~p~~~~~~v~   94 (365)
T 3abi_A           17 MKVLILGAGNIGRAIAWDLKD-EFDVYIGDVNNENLEKVKE-FATPLKVDASNFDKLVEVMKEFELVIGALPGFLGFKSI   94 (365)
T ss_dssp             CEEEEECCSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHTT-TSEEEECCTTCHHHHHHHHTTCSEEEECCCGGGHHHHH
T ss_pred             cEEEEECCCHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHhc-cCCcEEEecCCHHHHHHHHhCCCEEEEecCCcccchHH
Confidence            469999999999998887754 4689999998888777655 44344467778777888888999999999876445566


Q ss_pred             HhccccCCeEEEEccC
Q 018382          262 LSLLKLDGKLILTGVI  277 (357)
Q Consensus       262 ~~~l~~~G~~v~~g~~  277 (357)
                      ..|++.+-.++++...
T Consensus        95 ~~~~~~g~~yvD~s~~  110 (365)
T 3abi_A           95 KAAIKSKVDMVDVSFM  110 (365)
T ss_dssp             HHHHHHTCEEEECCCC
T ss_pred             HHHHhcCcceEeeecc
Confidence            6778888889887643

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=97.48  E-value=0.00085  Score=57.49  Aligned_cols=75  Identities=17%  Similarity=0.216  Sum_probs=57.3

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcE--EEcCCChhHHHHhhC---CccEEEEcCC
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQ--YLVSSDATRMQEAAD---SLDYIIDTVP  253 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~--vv~~~~~~~~~~~~~---~~d~v~d~~g  253 (357)
                      +++++||+|+ |++|.++++.+...|++|+++++++++.+.+.+++....  ..|..+.+.++++..   ++|++|+++|
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~Ag   85 (244)
T 3d3w_A            6 AGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNNAA   85 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEECCC
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCCEEEEeCCCHHHHHHHHHHcCCCCEEEECCc
Confidence            5789999987 999999999999999999999999887766655443222  246666665555543   6899999988


Q ss_pred             C
Q 018382          254 A  254 (357)
Q Consensus       254 ~  254 (357)
                      .
T Consensus        86 ~   86 (244)
T 3d3w_A           86 V   86 (244)
T ss_dssp             C
T ss_pred             c
Confidence            5

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=97.46  E-value=0.00076  Score=59.20  Aligned_cols=75  Identities=15%  Similarity=0.073  Sum_probs=53.9

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCC-c--E--EEcCCChhHHHHhh-------C
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGA-D--Q--YLVSSDATRMQEAA-------D  243 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~-~--~--vv~~~~~~~~~~~~-------~  243 (357)
                      .++++||+|+ |++|.++++.+...|++|++++++.++.+.+.+.   .|. .  .  ..|..+.+.++++.       +
T Consensus        31 ~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  110 (279)
T 1xg5_A           31 RDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHS  110 (279)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhCC
Confidence            4688999987 9999999999988999999999987766554332   231 1  1  23555554433322       3


Q ss_pred             CccEEEEcCCC
Q 018382          244 SLDYIIDTVPA  254 (357)
Q Consensus       244 ~~d~v~d~~g~  254 (357)
                      ++|++|+++|.
T Consensus       111 ~iD~vi~~Ag~  121 (279)
T 1xg5_A          111 GVDICINNAGL  121 (279)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999884

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=97.45  E-value=0.00049  Score=59.77  Aligned_cols=75  Identities=16%  Similarity=0.218  Sum_probs=57.9

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcE---EEcCCChhHHHHhh-------CCccEE
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQ---YLVSSDATRMQEAA-------DSLDYI  248 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~~-------~~~d~v  248 (357)
                      .++++||+|+ |++|.++++.+...|++|++++++.++.+.+.+.++...   ..|..+++.++++.       +++|++
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l   86 (259)
T 4e6p_A            7 EGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAGGLDIL   86 (259)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHSSSCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            5789999987 999999999998899999999999888877766666432   23556655444332       379999


Q ss_pred             EEcCCC
Q 018382          249 IDTVPA  254 (357)
Q Consensus       249 ~d~~g~  254 (357)
                      ++++|.
T Consensus        87 v~~Ag~   92 (259)
T 4e6p_A           87 VNNAAL   92 (259)
T ss_dssp             EECCCC
T ss_pred             EECCCc
Confidence            999985

>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*

Probab=97.45  E-value=0.00032  Score=60.63  Aligned_cols=96  Identities=19%  Similarity=0.180  Sum_probs=67.1

Q ss_pred             CCCCCCeEEEEecChHHHHHHHHHHHc--CCeEEEEeCCcHHHHHHHHhc---CCc--EEEcCCChhHHHHhh-CCccEE
Q 018382          177 LKQSGLRGGILGLGGVGHMGVLIAKAM--GHHVTVISSSDKKRVEAMEHL---GAD--QYLVSSDATRMQEAA-DSLDYI  248 (357)
Q Consensus       177 ~~~~~~~VlI~G~g~~G~~ai~la~~~--g~~V~~~~~~~~~~~~~~~~~---g~~--~vv~~~~~~~~~~~~-~~~d~v  248 (357)
                      .+.++++||-+|+|. |..++.+++..  +.+|+.++.+++..+.+++.+   |..  ..+...+..  .... +.+|+|
T Consensus        90 ~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~--~~~~~~~~D~v  166 (255)
T 3mb5_A           90 GISPGDFIVEAGVGS-GALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIY--EGIEEENVDHV  166 (255)
T ss_dssp             TCCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGG--GCCCCCSEEEE
T ss_pred             CCCCCCEEEEecCCc-hHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchh--hccCCCCcCEE
Confidence            348899999999875 88888888885  569999999988777766533   432  112222211  1122 369999


Q ss_pred             EEcCCCC-CChHHHHhccccCCeEEEEc
Q 018382          249 IDTVPAN-HPLEPYLSLLKLDGKLILTG  275 (357)
Q Consensus       249 ~d~~g~~-~~~~~~~~~l~~~G~~v~~g  275 (357)
                      +...... ..+..+.+.|+++|+++...
T Consensus       167 ~~~~~~~~~~l~~~~~~L~~gG~l~~~~  194 (255)
T 3mb5_A          167 ILDLPQPERVVEHAAKALKPGGFFVAYT  194 (255)
T ss_dssp             EECSSCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred             EECCCCHHHHHHHHHHHcCCCCEEEEEE
Confidence            8766653 26788999999999998764

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=97.45  E-value=0.00063  Score=58.53  Aligned_cols=75  Identities=17%  Similarity=0.195  Sum_probs=57.1

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcE-EEcCCChhHHHHhh-------CCccEEEE
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQ-YLVSSDATRMQEAA-------DSLDYIID  250 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~-------~~~d~v~d  250 (357)
                      .++++||+|+ |++|.++++.+...|++|+++++++++.+.+.+.+|... ..|..+.+.+++..       +++|++++
T Consensus         4 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lvn   83 (245)
T 1uls_A            4 KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVVH   83 (245)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            4678999987 999999999998899999999999888777766566432 24666654443322       37999999


Q ss_pred             cCCC
Q 018382          251 TVPA  254 (357)
Q Consensus       251 ~~g~  254 (357)
                      ++|.
T Consensus        84 ~Ag~   87 (245)
T 1uls_A           84 YAGI   87 (245)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            9985

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=97.44  E-value=0.00049  Score=59.60  Aligned_cols=75  Identities=23%  Similarity=0.212  Sum_probs=57.0

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcE---EEcCCChhHHHHhh-------CCccEE
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQ---YLVSSDATRMQEAA-------DSLDYI  248 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~~-------~~~d~v  248 (357)
                      .++++||+|+ |++|.++++.+...|++|+++++++++.+.+.+.++...   ..|..+++.++++.       +++|++
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~l   83 (254)
T 1hdc_A            4 SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGL   83 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            4688999987 999999999999999999999999888777666565322   23555554443332       379999


Q ss_pred             EEcCCC
Q 018382          249 IDTVPA  254 (357)
Q Consensus       249 ~d~~g~  254 (357)
                      ++++|.
T Consensus        84 v~nAg~   89 (254)
T 1hdc_A           84 VNNAGI   89 (254)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999885

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=97.43  E-value=0.00071  Score=60.33  Aligned_cols=109  Identities=17%  Similarity=0.104  Sum_probs=69.2

Q ss_pred             hhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCC---cHHHHHHHHhcC----Cc-EEEcCCChhHHHH
Q 018382          170 SPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSS---DKKRVEAMEHLG----AD-QYLVSSDATRMQE  240 (357)
Q Consensus       170 ~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~---~~~~~~~~~~~g----~~-~vv~~~~~~~~~~  240 (357)
                      .+|...+.--.++++||+|+|++|.+++..+...|+ +|+++.|+   .++.+.+.++++    .. ..++..+.+...+
T Consensus       137 ~~L~~~~~~l~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~  216 (312)
T 3t4e_A          137 RAIKESGFDMRGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTE  216 (312)
T ss_dssp             HHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHH
T ss_pred             HHHHhcCCCcCCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHh
Confidence            344443332468899999999999999999999999 89999999   666666554343    21 2344433222233


Q ss_pred             hhCCccEEEEcCCCCC--ChHH----HHhccccCCeEEEEccCC
Q 018382          241 AADSLDYIIDTVPANH--PLEP----YLSLLKLDGKLILTGVIN  278 (357)
Q Consensus       241 ~~~~~d~v~d~~g~~~--~~~~----~~~~l~~~G~~v~~g~~~  278 (357)
                      ....+|+||++++...  .-..    -...++++..++++-..+
T Consensus       217 ~l~~~DiIINaTp~Gm~~~~~~~~~~~~~~l~~~~~v~D~vY~P  260 (312)
T 3t4e_A          217 ALASADILTNGTKVGMKPLENESLIGDVSLLRPELLVTECVYNP  260 (312)
T ss_dssp             HHHHCSEEEECSSTTSTTSTTCCSCCCGGGSCTTCEEEECCCSS
T ss_pred             hccCceEEEECCcCCCCCCCCCcccCCHHHcCCCCEEEEeccCC
Confidence            4457999999987641  0011    124566666666664443

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=97.43  E-value=0.00068  Score=58.44  Aligned_cols=75  Identities=21%  Similarity=0.261  Sum_probs=56.6

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcE----EEcCCChhHHHHhh------CCccEE
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQ----YLVSSDATRMQEAA------DSLDYI  248 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~----vv~~~~~~~~~~~~------~~~d~v  248 (357)
                      .++++||+|+ |++|.++++.+...|++|+++++++++.+.+.+.++...    ..|..+.+.+++..      +++|++
T Consensus        10 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~l   89 (254)
T 2wsb_A           10 DGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAEAVAPVSIL   89 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceeEEEEecCCHHHHHHHHHHHHhhCCCcEE
Confidence            5688999987 999999999998899999999999887766655455332    23555554444332      579999


Q ss_pred             EEcCCC
Q 018382          249 IDTVPA  254 (357)
Q Consensus       249 ~d~~g~  254 (357)
                      |+++|.
T Consensus        90 i~~Ag~   95 (254)
T 2wsb_A           90 VNSAGI   95 (254)
T ss_dssp             EECCCC
T ss_pred             EECCcc
Confidence            999885

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=97.42  E-value=0.00047  Score=59.71  Aligned_cols=75  Identities=11%  Similarity=0.093  Sum_probs=56.5

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCCcE---EEcCCChhHHHHh-------hCCc
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGADQ---YLVSSDATRMQEA-------ADSL  245 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~~~---vv~~~~~~~~~~~-------~~~~  245 (357)
                      +|+++||+|+ +++|.+.++.+...|++|+++.+++++.+.+.++   .|.+.   ..|..+++.++++       .+++
T Consensus         6 ~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~i   85 (254)
T 4fn4_A            6 KNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYSRI   85 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999987 9999999999989999999999998877655443   45332   3466665544433       2479


Q ss_pred             cEEEEcCCC
Q 018382          246 DYIIDTVPA  254 (357)
Q Consensus       246 d~v~d~~g~  254 (357)
                      |++++++|.
T Consensus        86 DiLVNNAGi   94 (254)
T 4fn4_A           86 DVLCNNAGI   94 (254)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCcc
Confidence            999999873

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=97.41  E-value=0.00056  Score=60.13  Aligned_cols=75  Identities=15%  Similarity=0.192  Sum_probs=57.9

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcE---EEcCCChhHHHHhh-------CCccEE
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQ---YLVSSDATRMQEAA-------DSLDYI  248 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~~-------~~~d~v  248 (357)
                      .++++||+|+ |++|.++++.+...|++|+++++++++.+.+.+.++...   ..|..+.+.++++.       +++|++
T Consensus        26 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  105 (277)
T 4dqx_A           26 NQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWGRVDVL  105 (277)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            5789999987 999999999999999999999999888877766666432   24556654443332       379999


Q ss_pred             EEcCCC
Q 018382          249 IDTVPA  254 (357)
Q Consensus       249 ~d~~g~  254 (357)
                      ++++|.
T Consensus       106 v~nAg~  111 (277)
T 4dqx_A          106 VNNAGF  111 (277)
T ss_dssp             EECCCC
T ss_pred             EECCCc
Confidence            999984

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=97.41  E-value=0.00041  Score=59.87  Aligned_cols=75  Identities=15%  Similarity=0.229  Sum_probs=57.7

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCc---EEEcCCChhHHHHhh-------CCccEE
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGAD---QYLVSSDATRMQEAA-------DSLDYI  248 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~~~-------~~~d~v  248 (357)
                      .++++||+|+ +++|.++++.+...|++|+++++++++.+.+.+.++..   ...|..+.+.++++.       +++|++
T Consensus         8 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l   87 (248)
T 3op4_A            8 EGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGGVDIL   87 (248)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHCCCSEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            5789999987 99999999999999999999999988877776655532   234666655444332       379999


Q ss_pred             EEcCCC
Q 018382          249 IDTVPA  254 (357)
Q Consensus       249 ~d~~g~  254 (357)
                      ++++|.
T Consensus        88 v~nAg~   93 (248)
T 3op4_A           88 VNNAGI   93 (248)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999885

>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}

Probab=97.41  E-value=0.0012  Score=55.03  Aligned_cols=95  Identities=12%  Similarity=0.124  Sum_probs=66.4

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCCc---EEEcCCChhHHHHhhCCccEEEEcC
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGAD---QYLVSSDATRMQEAADSLDYIIDTV  252 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~~---~vv~~~~~~~~~~~~~~~d~v~d~~  252 (357)
                      .++++||-+|+|. |..++.+++. +.+|++++.+++..+.+++.   .|..   .++..+..+.+.. ...+|+|+...
T Consensus        54 ~~~~~vLDlGcG~-G~~~~~la~~-~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~-~~~~D~v~~~~  130 (204)
T 3njr_A           54 RRGELLWDIGGGS-GSVSVEWCLA-GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALAD-LPLPEAVFIGG  130 (204)
T ss_dssp             CTTCEEEEETCTT-CHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTT-SCCCSEEEECS
T ss_pred             CCCCEEEEecCCC-CHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhccc-CCCCCEEEECC
Confidence            7899999999875 7888888888 88999999999887766653   3433   2333222221111 23799999765


Q ss_pred             CCCC-ChHHHHhccccCCeEEEEcc
Q 018382          253 PANH-PLEPYLSLLKLDGKLILTGV  276 (357)
Q Consensus       253 g~~~-~~~~~~~~l~~~G~~v~~g~  276 (357)
                      +... .+..+.+.|+++|+++....
T Consensus       131 ~~~~~~l~~~~~~LkpgG~lv~~~~  155 (204)
T 3njr_A          131 GGSQALYDRLWEWLAPGTRIVANAV  155 (204)
T ss_dssp             CCCHHHHHHHHHHSCTTCEEEEEEC
T ss_pred             cccHHHHHHHHHhcCCCcEEEEEec
Confidence            4432 46778889999999987643

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=97.41  E-value=0.00054  Score=58.60  Aligned_cols=74  Identities=12%  Similarity=0.082  Sum_probs=56.1

Q ss_pred             CCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCc---EEEcCCChhHHHHh-------hCCccEEE
Q 018382          181 GLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGAD---QYLVSSDATRMQEA-------ADSLDYII  249 (357)
Q Consensus       181 ~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~~-------~~~~d~v~  249 (357)
                      ++++||+|+ |++|.++++.+...|++|+++++++++.+.+.+.++..   ...|..+.+.++++       .+++|+++
T Consensus         3 ~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv   82 (235)
T 3l6e_A            3 LGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVEWGGLPELVL   82 (235)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHHHHHCSCSEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCCcEEE
Confidence            578999987 99999999998889999999999998887776655532   22355555443332       23799999


Q ss_pred             EcCCC
Q 018382          250 DTVPA  254 (357)
Q Consensus       250 d~~g~  254 (357)
                      +++|.
T Consensus        83 nnAg~   87 (235)
T 3l6e_A           83 HCAGT   87 (235)
T ss_dssp             EECCC
T ss_pred             ECCCC
Confidence            99886

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=97.40  E-value=0.0018  Score=57.19  Aligned_cols=97  Identities=21%  Similarity=0.202  Sum_probs=65.7

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHH-HHH---HHhcCCcE---EEcCCChhHHHHh-------hCC
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKR-VEA---MEHLGADQ---YLVSSDATRMQEA-------ADS  244 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~-~~~---~~~~g~~~---vv~~~~~~~~~~~-------~~~  244 (357)
                      .++++||+|+ |++|.++++.+...|++|+++++++++. +.+   .+..|...   ..|..+.+.++++       .++
T Consensus        46 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  125 (291)
T 3ijr_A           46 KGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLGS  125 (291)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            5789999987 9999999999999999999999886642 222   22245332   2355665443332       237


Q ss_pred             ccEEEEcCCCCC--------------------------ChHHHHhccccCCeEEEEcc
Q 018382          245 LDYIIDTVPANH--------------------------PLEPYLSLLKLDGKLILTGV  276 (357)
Q Consensus       245 ~d~v~d~~g~~~--------------------------~~~~~~~~l~~~G~~v~~g~  276 (357)
                      +|++++++|...                          ..+.++..++++|+++.++.
T Consensus       126 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS  183 (291)
T 3ijr_A          126 LNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTAS  183 (291)
T ss_dssp             CCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECC
T ss_pred             CCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEec
Confidence            999999987421                          12234456677899998865

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=97.40  E-value=0.0017  Score=56.39  Aligned_cols=98  Identities=7%  Similarity=0.093  Sum_probs=65.1

Q ss_pred             CCCeEEEEec-Ch--HHHHHHHHHHHcCCeEEEEeCCcHHHH---HHHHhcCC--cE--EEcCCChhHHHHh-------h
Q 018382          180 SGLRGGILGL-GG--VGHMGVLIAKAMGHHVTVISSSDKKRV---EAMEHLGA--DQ--YLVSSDATRMQEA-------A  242 (357)
Q Consensus       180 ~~~~VlI~G~-g~--~G~~ai~la~~~g~~V~~~~~~~~~~~---~~~~~~g~--~~--vv~~~~~~~~~~~-------~  242 (357)
                      .++++||+|+ |.  +|.++++.+...|++|+++.+++...+   .+.+.++.  -.  ..|..+.+.++++       .
T Consensus         6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   85 (266)
T 3oig_A            6 EGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQV   85 (266)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHHh
Confidence            5789999986 55  999999998888999999988865333   33333443  11  2455555443332       2


Q ss_pred             CCccEEEEcCCCCC-----------------------------ChHHHHhccccCCeEEEEccC
Q 018382          243 DSLDYIIDTVPANH-----------------------------PLEPYLSLLKLDGKLILTGVI  277 (357)
Q Consensus       243 ~~~d~v~d~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~g~~  277 (357)
                      +.+|++++++|...                             ..+.+...++++|+++.++..
T Consensus        86 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~  149 (266)
T 3oig_A           86 GVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYL  149 (266)
T ss_dssp             SCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECG
T ss_pred             CCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecc
Confidence            37999999987531                             122344566678999988754

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=97.39  E-value=0.00051  Score=60.79  Aligned_cols=76  Identities=17%  Similarity=0.155  Sum_probs=59.5

Q ss_pred             CCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcE---EEcCCChhHHHHhh---CCccEEEEc
Q 018382          179 QSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQ---YLVSSDATRMQEAA---DSLDYIIDT  251 (357)
Q Consensus       179 ~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~~---~~~d~v~d~  251 (357)
                      -+++++||+|+ |++|.++++.+...|++|+++++++++.+.+.+.++...   ..|..+.+.++++.   +++|+++++
T Consensus        14 l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~iD~lv~n   93 (291)
T 3rd5_A           14 FAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGVSGADVLINN   93 (291)
T ss_dssp             CTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTCCCEEEEEEC
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhcCCCCEEEEC
Confidence            36789999987 999999999999999999999999988887777665322   24556665555543   378999999


Q ss_pred             CCC
Q 018382          252 VPA  254 (357)
Q Consensus       252 ~g~  254 (357)
                      +|.
T Consensus        94 Ag~   96 (291)
T 3rd5_A           94 AGI   96 (291)
T ss_dssp             CCC
T ss_pred             CcC
Confidence            885

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=97.39  E-value=0.00064  Score=58.99  Aligned_cols=75  Identities=15%  Similarity=0.164  Sum_probs=57.8

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcE---EEcCCChhHHHHhh-------CCccEE
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQ---YLVSSDATRMQEAA-------DSLDYI  248 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~~-------~~~d~v  248 (357)
                      .++++||+|+ +++|.++++.+...|++|+++++++++.+.+.++++...   ..|..+.+.++++.       +++|++
T Consensus         8 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   87 (261)
T 3n74_A            8 EGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKFGKVDIL   87 (261)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            5689999987 999999999999999999999999998887777676432   23555554433322       379999


Q ss_pred             EEcCCC
Q 018382          249 IDTVPA  254 (357)
Q Consensus       249 ~d~~g~  254 (357)
                      ++++|.
T Consensus        88 i~~Ag~   93 (261)
T 3n74_A           88 VNNAGI   93 (261)
T ss_dssp             EECCCC
T ss_pred             EECCcc
Confidence            999885

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=97.39  E-value=0.00047  Score=60.34  Aligned_cols=76  Identities=14%  Similarity=0.207  Sum_probs=58.3

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCc---EEEcCCChhHHHHhh-------CCccEE
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGAD---QYLVSSDATRMQEAA-------DSLDYI  248 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~~~-------~~~d~v  248 (357)
                      .++++||+|+ |++|.++++.+...|++|+++++++++.+.+.+.++..   ...|..+.+.++++.       +++|++
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l   89 (271)
T 3tzq_B           10 ENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTFGRLDIV   89 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            5789999987 99999999999999999999999988877776666632   234666655444332       379999


Q ss_pred             EEcCCCC
Q 018382          249 IDTVPAN  255 (357)
Q Consensus       249 ~d~~g~~  255 (357)
                      ++++|..
T Consensus        90 v~nAg~~   96 (271)
T 3tzq_B           90 DNNAAHS   96 (271)
T ss_dssp             EECCCCC
T ss_pred             EECCCCC
Confidence            9998853

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=97.39  E-value=0.0015  Score=56.79  Aligned_cols=75  Identities=15%  Similarity=0.185  Sum_probs=53.9

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcC-----Cc---EEEcCCChhHHHHhh-------C
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLG-----AD---QYLVSSDATRMQEAA-------D  243 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g-----~~---~vv~~~~~~~~~~~~-------~  243 (357)
                      .++++||+|+ |++|.++++.+...|++|+++++++++.+.+.+.+.     ..   ...|..+++.++++.       +
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   85 (267)
T 2gdz_A            6 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG   85 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHcC
Confidence            4678999987 999999999999899999999998877655443232     11   123556654443322       3


Q ss_pred             CccEEEEcCCC
Q 018382          244 SLDYIIDTVPA  254 (357)
Q Consensus       244 ~~d~v~d~~g~  254 (357)
                      ++|++++++|.
T Consensus        86 ~id~lv~~Ag~   96 (267)
T 2gdz_A           86 RLDILVNNAGV   96 (267)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            68999999985

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=97.38  E-value=0.00074  Score=58.67  Aligned_cols=75  Identities=17%  Similarity=0.160  Sum_probs=56.2

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCc---EEEcCCChhHHHHhh-------CCccEE
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGAD---QYLVSSDATRMQEAA-------DSLDYI  248 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~~~-------~~~d~v  248 (357)
                      .++++||+|+ |++|.++++.+...|++|+++++++++.+.+.+.++..   ...|..+.+.++++.       +++|++
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~l   85 (260)
T 1nff_A            6 TGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVL   85 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcCceEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            5688999987 99999999999889999999999988777665545422   124556655444332       379999


Q ss_pred             EEcCCC
Q 018382          249 IDTVPA  254 (357)
Q Consensus       249 ~d~~g~  254 (357)
                      |+++|.
T Consensus        86 v~~Ag~   91 (260)
T 1nff_A           86 VNNAGI   91 (260)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999885

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=97.37  E-value=0.0011  Score=58.90  Aligned_cols=77  Identities=19%  Similarity=0.197  Sum_probs=54.4

Q ss_pred             CCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc---C-Cc---EEEcCCCh-hHHHHh-------h
Q 018382          179 QSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL---G-AD---QYLVSSDA-TRMQEA-------A  242 (357)
Q Consensus       179 ~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~---g-~~---~vv~~~~~-~~~~~~-------~  242 (357)
                      ..++++||+|+ |++|.++++.+...|++|+++++++++.+.+.+++   + ..   ..+|..+. +.++.+       .
T Consensus        10 ~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~   89 (311)
T 3o26_A           10 TKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHF   89 (311)
T ss_dssp             --CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred             CCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHhC
Confidence            35788999987 99999999999889999999999988765554433   2 11   22455554 433332       2


Q ss_pred             CCccEEEEcCCCC
Q 018382          243 DSLDYIIDTVPAN  255 (357)
Q Consensus       243 ~~~d~v~d~~g~~  255 (357)
                      +++|++|+++|..
T Consensus        90 g~iD~lv~nAg~~  102 (311)
T 3o26_A           90 GKLDILVNNAGVA  102 (311)
T ss_dssp             SSCCEEEECCCCC
T ss_pred             CCCCEEEECCccc
Confidence            4899999999853

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=97.35  E-value=0.0013  Score=57.43  Aligned_cols=98  Identities=17%  Similarity=0.222  Sum_probs=65.3

Q ss_pred             CCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCc-HHHHHHHH---hcCCcE---EEcCCChhHHHHhh-------C
Q 018382          179 QSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSD-KKRVEAME---HLGADQ---YLVSSDATRMQEAA-------D  243 (357)
Q Consensus       179 ~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~-~~~~~~~~---~~g~~~---vv~~~~~~~~~~~~-------~  243 (357)
                      -.++++||+|+ +++|.++++.+...|++|+++.+.. ++.+.+.+   ..|...   ..|..+.+.++++.       +
T Consensus        29 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  108 (271)
T 3v2g_A           29 LAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALG  108 (271)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            36789999987 9999999999989999999986554 33333322   235332   23555554433322       3


Q ss_pred             CccEEEEcCCCCC-------------------------ChHHHHhccccCCeEEEEcc
Q 018382          244 SLDYIIDTVPANH-------------------------PLEPYLSLLKLDGKLILTGV  276 (357)
Q Consensus       244 ~~d~v~d~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~  276 (357)
                      ++|++++++|...                         ..+.+...|+++|+++.++.
T Consensus       109 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS  166 (271)
T 3v2g_A          109 GLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGS  166 (271)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECC
T ss_pred             CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeC
Confidence            7999999987521                         12334456677899998865

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=97.35  E-value=0.0014  Score=50.64  Aligned_cols=75  Identities=19%  Similarity=0.194  Sum_probs=56.4

Q ss_pred             CCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEE-cCCChhHHHHh-hCCccEEEEcCCCC
Q 018382          181 GLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYL-VSSDATRMQEA-ADSLDYIIDTVPAN  255 (357)
Q Consensus       181 ~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv-~~~~~~~~~~~-~~~~d~v~d~~g~~  255 (357)
                      +.+|+|+|+|.+|..+++.+...|.+|+++++++++.+.+.+.+|...+. +..+.+.+.+. ..++|+|+.+++..
T Consensus         4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~   80 (140)
T 1lss_A            4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGKE   80 (140)
T ss_dssp             -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSCH
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEeeCCc
Confidence            45799999999999999999888999999999988877776656754332 33444444433 35799999998875

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=97.35  E-value=0.00058  Score=58.83  Aligned_cols=76  Identities=16%  Similarity=0.192  Sum_probs=58.2

Q ss_pred             CCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcE---EEcCCChhHHHHhh---CCccEEEEc
Q 018382          179 QSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQ---YLVSSDATRMQEAA---DSLDYIIDT  251 (357)
Q Consensus       179 ~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~~---~~~d~v~d~  251 (357)
                      .++++|||+|+ |++|.++++.+...|++|+++++++++.+.+.+.+....   ..|..+.+.+.++.   +++|+++++
T Consensus        12 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~   91 (249)
T 3f9i_A           12 LTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISKTSNLDILVCN   91 (249)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHTCSCCSEEEEC
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHhcCCCCEEEEC
Confidence            57889999987 999999999998999999999999988887776565432   23555555444443   379999999


Q ss_pred             CCC
Q 018382          252 VPA  254 (357)
Q Consensus       252 ~g~  254 (357)
                      +|.
T Consensus        92 Ag~   94 (249)
T 3f9i_A           92 AGI   94 (249)
T ss_dssp             CC-
T ss_pred             CCC
Confidence            884

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=97.35  E-value=0.00091  Score=58.21  Aligned_cols=75  Identities=16%  Similarity=0.147  Sum_probs=53.2

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHH-cCCeEEEEeCCcHHHHHHHHhc---CC-cE--EEcCCChhHHHHhh-------CC
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKA-MGHHVTVISSSDKKRVEAMEHL---GA-DQ--YLVSSDATRMQEAA-------DS  244 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~-~g~~V~~~~~~~~~~~~~~~~~---g~-~~--vv~~~~~~~~~~~~-------~~  244 (357)
                      +++++||+|+ |++|.++++.+.. .|++|++++++.++.+.+.+.+   +. ..  ..|..+.+.++++.       ++
T Consensus         3 ~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~   82 (276)
T 1wma_A            3 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGG   82 (276)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            5688999987 9999999888887 8999999999877655443322   32 12  24555554433332       37


Q ss_pred             ccEEEEcCCC
Q 018382          245 LDYIIDTVPA  254 (357)
Q Consensus       245 ~d~v~d~~g~  254 (357)
                      +|++|+++|.
T Consensus        83 id~li~~Ag~   92 (276)
T 1wma_A           83 LDVLVNNAGI   92 (276)
T ss_dssp             EEEEEECCCC
T ss_pred             CCEEEECCcc
Confidence            9999999875

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=97.35  E-value=0.00098  Score=57.91  Aligned_cols=75  Identities=17%  Similarity=0.213  Sum_probs=55.0

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc----CCcE---EEcCCChhHHHHhh-------CC
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL----GADQ---YLVSSDATRMQEAA-------DS  244 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~----g~~~---vv~~~~~~~~~~~~-------~~  244 (357)
                      .++++||+|+ |++|.++++.+...|++|+++++++++.+.+.+.+    +...   ..|..+.+.++++.       ++
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   85 (263)
T 3ai3_A            6 SGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSFGG   85 (263)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4688999987 99999999999889999999999987765544323    5322   23666655444332       37


Q ss_pred             ccEEEEcCCC
Q 018382          245 LDYIIDTVPA  254 (357)
Q Consensus       245 ~d~v~d~~g~  254 (357)
                      +|++++++|.
T Consensus        86 id~lv~~Ag~   95 (263)
T 3ai3_A           86 ADILVNNAGT   95 (263)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999985

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=97.34  E-value=0.00099  Score=58.55  Aligned_cols=102  Identities=16%  Similarity=0.004  Sum_probs=68.2

Q ss_pred             hhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCC---cEEEcCCChhHHHHhhCCc
Q 018382          170 SPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGA---DQYLVSSDATRMQEAADSL  245 (357)
Q Consensus       170 ~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~---~~vv~~~~~~~~~~~~~~~  245 (357)
                      .+|...+.--.+++++|+|+|++|.+++..+...|+ +|++..|+.++.+.+.+.++.   ..++...      ++...+
T Consensus       115 ~~L~~~~~~l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~------~l~~~a  188 (281)
T 3o8q_A          115 QDLLAQQVLLKGATILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQAFE------QLKQSY  188 (281)
T ss_dssp             HHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEEEGG------GCCSCE
T ss_pred             HHHHHhCCCccCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeEeeHH------HhcCCC
Confidence            334444332368899999999999999999988997 999999999888777765653   2233221      223689


Q ss_pred             cEEEEcCCCCCChH---HHHhccccCCeEEEEccC
Q 018382          246 DYIIDTVPANHPLE---PYLSLLKLDGKLILTGVI  277 (357)
Q Consensus       246 d~v~d~~g~~~~~~---~~~~~l~~~G~~v~~g~~  277 (357)
                      |+|+++++....-+   .-.+.++++..++++...
T Consensus       189 DiIInaTp~gm~~~~~~l~~~~l~~~~~V~DlvY~  223 (281)
T 3o8q_A          189 DVIINSTSASLDGELPAIDPVIFSSRSVCYDMMYG  223 (281)
T ss_dssp             EEEEECSCCCC----CSCCGGGEEEEEEEEESCCC
T ss_pred             CEEEEcCcCCCCCCCCCCCHHHhCcCCEEEEecCC
Confidence            99999987652111   112456666666666443

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=97.34  E-value=0.001  Score=57.86  Aligned_cols=75  Identities=13%  Similarity=0.108  Sum_probs=56.4

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCC--c-EEEcCCChhHHHHhh-------CCccEE
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGA--D-QYLVSSDATRMQEAA-------DSLDYI  248 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~--~-~vv~~~~~~~~~~~~-------~~~d~v  248 (357)
                      .++++||+|+ |++|.++++.+...|++|+++++++++.+.+.+.+..  . ...|..+.+.++++.       +++|++
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~iD~l   90 (263)
T 3ak4_A           11 SGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDALGGFDLL   90 (263)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHHHHHHTCCCEE
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            4688999987 9999999999998999999999998877766654532  1 224666655444332       379999


Q ss_pred             EEcCCC
Q 018382          249 IDTVPA  254 (357)
Q Consensus       249 ~d~~g~  254 (357)
                      |+++|.
T Consensus        91 v~~Ag~   96 (263)
T 3ak4_A           91 CANAGV   96 (263)
T ss_dssp             EECCCC
T ss_pred             EECCCc
Confidence            999884

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=97.33  E-value=0.0018  Score=56.98  Aligned_cols=98  Identities=19%  Similarity=0.219  Sum_probs=65.2

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHH-HHHHH---HhcCCcE---EEcCCChhHHHHh-------hCC
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKK-RVEAM---EHLGADQ---YLVSSDATRMQEA-------ADS  244 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~-~~~~~---~~~g~~~---vv~~~~~~~~~~~-------~~~  244 (357)
                      .++++||+|+ |++|.++++.+...|++|++++++.++ .+.+.   +..|.+.   ..|..+.+.++++       .++
T Consensus        28 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  107 (283)
T 1g0o_A           28 EGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGK  107 (283)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            5688999987 999999999999999999999988654 22221   2245332   2355554433332       247


Q ss_pred             ccEEEEcCCCCC-------------------------ChHHHHhccccCCeEEEEccC
Q 018382          245 LDYIIDTVPANH-------------------------PLEPYLSLLKLDGKLILTGVI  277 (357)
Q Consensus       245 ~d~v~d~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~~  277 (357)
                      +|++++++|...                         ..+.+...|+..|+++.++..
T Consensus       108 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~  165 (283)
T 1g0o_A          108 LDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSI  165 (283)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCG
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEech
Confidence            999999998531                         113344556667999988753

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=97.32  E-value=0.0012  Score=57.64  Aligned_cols=75  Identities=20%  Similarity=0.191  Sum_probs=55.0

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc----CCcE---EEcCCChhHHHHhh-------CC
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL----GADQ---YLVSSDATRMQEAA-------DS  244 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~----g~~~---vv~~~~~~~~~~~~-------~~  244 (357)
                      .++++||+|+ |++|.++++.+...|++|+++++++++.+.+.+.+    |...   ..|..+.+.++++.       ++
T Consensus        20 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   99 (267)
T 1vl8_A           20 RGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGK   99 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4688999987 99999999999989999999999987765544333    5332   23566654433322       37


Q ss_pred             ccEEEEcCCC
Q 018382          245 LDYIIDTVPA  254 (357)
Q Consensus       245 ~d~v~d~~g~  254 (357)
                      +|++|+++|.
T Consensus       100 iD~lvnnAg~  109 (267)
T 1vl8_A          100 LDTVVNAAGI  109 (267)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCc
Confidence            9999999885

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=97.32  E-value=0.00072  Score=57.65  Aligned_cols=96  Identities=18%  Similarity=0.178  Sum_probs=66.7

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCC-cEE-EcCCChhHHHHhhCCccEEEEcCCCCC
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGA-DQY-LVSSDATRMQEAADSLDYIIDTVPANH  256 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~-~~v-v~~~~~~~~~~~~~~~d~v~d~~g~~~  256 (357)
                      .+.+|||+|+ |.+|..+++.+...|.+|+++++++++.+.+.. .+. ..+ .|..  +.+.+..+++|+||+++|...
T Consensus        20 ~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~-~~~~~~~~~Dl~--~~~~~~~~~~D~vi~~ag~~~   96 (236)
T 3e8x_A           20 QGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE-RGASDIVVANLE--EDFSHAFASIDAVVFAAGSGP   96 (236)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-TTCSEEEECCTT--SCCGGGGTTCSEEEECCCCCT
T ss_pred             CCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh-CCCceEEEcccH--HHHHHHHcCCCEEEECCCCCC
Confidence            4789999987 999999999999999999999999988877766 565 332 2333  233344458999999998641


Q ss_pred             --C-----------hHHHHhccc--cCCeEEEEccCC
Q 018382          257 --P-----------LEPYLSLLK--LDGKLILTGVIN  278 (357)
Q Consensus       257 --~-----------~~~~~~~l~--~~G~~v~~g~~~  278 (357)
                        .           ...+++.++  ..++++.++...
T Consensus        97 ~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~  133 (236)
T 3e8x_A           97 HTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVG  133 (236)
T ss_dssp             TSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTT
T ss_pred             CCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCC
Confidence              0           112233333  236888887644

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=97.31  E-value=0.00054  Score=59.39  Aligned_cols=75  Identities=13%  Similarity=0.102  Sum_probs=49.5

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCc-E--EEcCCChhHHHHhh-------CCccEE
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGAD-Q--YLVSSDATRMQEAA-------DSLDYI  248 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~-~--vv~~~~~~~~~~~~-------~~~d~v  248 (357)
                      .++++||+|+ +++|.++++.+...|++|+++++++++.+...+.++.. .  ..|..+.+.++++.       +++|++
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l   85 (257)
T 3tpc_A            6 KSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQEFGHVHGL   85 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC------------CEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            5788999987 99999999999999999999999988776665556532 1  23555554433332       389999


Q ss_pred             EEcCCC
Q 018382          249 IDTVPA  254 (357)
Q Consensus       249 ~d~~g~  254 (357)
                      ++++|.
T Consensus        86 v~nAg~   91 (257)
T 3tpc_A           86 VNCAGT   91 (257)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999885

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=97.31  E-value=0.0018  Score=57.39  Aligned_cols=76  Identities=24%  Similarity=0.285  Sum_probs=53.8

Q ss_pred             CCCeEEEEec-C--hHHHHHHHHHHHcCCeEEEEeCCcHHHH---HHHHhcCCcEE--EcCCChhHHHHhh-------CC
Q 018382          180 SGLRGGILGL-G--GVGHMGVLIAKAMGHHVTVISSSDKKRV---EAMEHLGADQY--LVSSDATRMQEAA-------DS  244 (357)
Q Consensus       180 ~~~~VlI~G~-g--~~G~~ai~la~~~g~~V~~~~~~~~~~~---~~~~~~g~~~v--v~~~~~~~~~~~~-------~~  244 (357)
                      .++++||+|+ |  ++|.++++.+...|++|++++++++..+   .+.+..|....  .|..+.+.++++.       ++
T Consensus        29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  108 (296)
T 3k31_A           29 EGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEEWGS  108 (296)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            5789999987 5  9999999999889999999999875433   23333453332  4666655444332       47


Q ss_pred             ccEEEEcCCCC
Q 018382          245 LDYIIDTVPAN  255 (357)
Q Consensus       245 ~d~v~d~~g~~  255 (357)
                      +|++++++|..
T Consensus       109 iD~lVnnAG~~  119 (296)
T 3k31_A          109 LDFVVHAVAFS  119 (296)
T ss_dssp             CSEEEECCCCC
T ss_pred             CCEEEECCCcC
Confidence            99999999853

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=97.31  E-value=0.0018  Score=55.33  Aligned_cols=75  Identities=20%  Similarity=0.300  Sum_probs=56.7

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcC-CcE-EEcCCChhHHHHhhC---CccEEEEcCC
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLG-ADQ-YLVSSDATRMQEAAD---SLDYIIDTVP  253 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g-~~~-vv~~~~~~~~~~~~~---~~d~v~d~~g  253 (357)
                      +++++||+|+ |++|.++++.+...|++|++++++.++.+.+.+... ... ..|..+.+.++++..   ++|++|+++|
T Consensus         6 ~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~Ag   85 (244)
T 1cyd_A            6 SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNNAA   85 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEECCC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCCcEEecCCCHHHHHHHHHHcCCCCEEEECCc
Confidence            5688999987 999999999999899999999999877766555343 222 346666665555543   5899999998


Q ss_pred             C
Q 018382          254 A  254 (357)
Q Consensus       254 ~  254 (357)
                      .
T Consensus        86 ~   86 (244)
T 1cyd_A           86 L   86 (244)
T ss_dssp             C
T ss_pred             c
Confidence            4

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=97.30  E-value=0.00071  Score=58.73  Aligned_cols=75  Identities=16%  Similarity=0.173  Sum_probs=56.5

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcE---EEcCCChhHHHHhh-------CCccEE
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQ---YLVSSDATRMQEAA-------DSLDYI  248 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~~-------~~~d~v  248 (357)
                      .++++||+|+ |++|.++++.+...|++|++++++.++.+.+.+.++...   ..|..+.+.++++.       +++|++
T Consensus        11 ~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l   90 (265)
T 2o23_A           11 KGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDVA   90 (265)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEE
Confidence            5688999987 999999999999899999999998877766665566432   23555554444332       379999


Q ss_pred             EEcCCC
Q 018382          249 IDTVPA  254 (357)
Q Consensus       249 ~d~~g~  254 (357)
                      |+++|.
T Consensus        91 i~~Ag~   96 (265)
T 2o23_A           91 VNCAGI   96 (265)
T ss_dssp             EECCCC
T ss_pred             EECCcc
Confidence            999875

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=97.30  E-value=0.0013  Score=57.65  Aligned_cols=106  Identities=14%  Similarity=0.054  Sum_probs=69.8

Q ss_pred             hhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccE
Q 018382          169 FSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDY  247 (357)
Q Consensus       169 ~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~  247 (357)
                      ..+|...+.--.++++||+|+|++|.+++..+...|+ +|+++.|+.++.+.+.+.++   .+..   +.+.++  .+|+
T Consensus       110 ~~~L~~~~~~~~~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~~~~---~~~~---~~l~~l--~~Di  181 (282)
T 3fbt_A          110 GKMLSKFRVEIKNNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYGEFK---VISY---DELSNL--KGDV  181 (282)
T ss_dssp             HHHHHHTTCCCTTSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCTTSE---EEEH---HHHTTC--CCSE
T ss_pred             HHHHHHcCCCccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhcC---cccH---HHHHhc--cCCE
Confidence            3445443432468899999999999999999999999 89999999888776655443   2222   112222  7999


Q ss_pred             EEEcCCCCC--C---hHHHHhccccCCeEEEEccCCCCcc
Q 018382          248 IIDTVPANH--P---LEPYLSLLKLDGKLILTGVINTPMQ  282 (357)
Q Consensus       248 v~d~~g~~~--~---~~~~~~~l~~~G~~v~~g~~~~~~~  282 (357)
                      |+++++...  .   .......++++..++++...+..+.
T Consensus       182 vInaTp~Gm~~~~~~~pi~~~~l~~~~~v~DlvY~P~~T~  221 (282)
T 3fbt_A          182 IINCTPKGMYPKEGESPVDKEVVAKFSSAVDLIYNPVETL  221 (282)
T ss_dssp             EEECSSTTSTTSTTCCSSCHHHHTTCSEEEESCCSSSSCH
T ss_pred             EEECCccCccCCCccCCCCHHHcCCCCEEEEEeeCCCCCH
Confidence            999986531  0   1123455777777777654443333

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=97.30  E-value=0.0008  Score=59.23  Aligned_cols=75  Identities=21%  Similarity=0.148  Sum_probs=57.5

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcE---EEcCCChhHHHHh-------hCCccEE
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQ---YLVSSDATRMQEA-------ADSLDYI  248 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~-------~~~~d~v  248 (357)
                      .++++||+|+ +++|.++++.+...|++|++++++.++.+.+.+.++...   ..|..+.+.++++       .+++|++
T Consensus         4 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~l   83 (281)
T 3zv4_A            4 TGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAFGKIDTL   83 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            4789999987 999999999999999999999999988887777666432   2355554433322       2479999


Q ss_pred             EEcCCC
Q 018382          249 IDTVPA  254 (357)
Q Consensus       249 ~d~~g~  254 (357)
                      ++++|.
T Consensus        84 vnnAg~   89 (281)
T 3zv4_A           84 IPNAGI   89 (281)
T ss_dssp             ECCCCC
T ss_pred             EECCCc
Confidence            999985

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=97.30  E-value=0.00017  Score=61.96  Aligned_cols=98  Identities=15%  Similarity=0.180  Sum_probs=68.0

Q ss_pred             CCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcC-CcEEEcCCChhHHHHhh---CCccEEEEcCC
Q 018382          179 QSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLG-ADQYLVSSDATRMQEAA---DSLDYIIDTVP  253 (357)
Q Consensus       179 ~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g-~~~vv~~~~~~~~~~~~---~~~d~v~d~~g  253 (357)
                      -.|+++||+|+ +++|.+.++.+...|++|+++.+++++.+.... -. .....|..+++.++++.   +++|++++++|
T Consensus         9 f~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~g~iDiLVNNAG   87 (242)
T 4b79_A            9 YAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAPRH-PRIRREELDITDSQRLQRLFEALPRLDVLVNNAG   87 (242)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSCCC-TTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhhhc-CCeEEEEecCCCHHHHHHHHHhcCCCCEEEECCC
Confidence            36999999987 999999999999999999999998776543211 11 12234666666555543   47999999998


Q ss_pred             CCC-----------------------ChHHHHhccc-cCCeEEEEccC
Q 018382          254 ANH-----------------------PLEPYLSLLK-LDGKLILTGVI  277 (357)
Q Consensus       254 ~~~-----------------------~~~~~~~~l~-~~G~~v~~g~~  277 (357)
                      -..                       ..+.+...|+ .+|++|.++..
T Consensus        88 i~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~  135 (242)
T 4b79_A           88 ISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASM  135 (242)
T ss_dssp             CCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCG
T ss_pred             CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeec
Confidence            641                       1123334454 47999998754

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=97.30  E-value=0.0017  Score=57.48  Aligned_cols=99  Identities=19%  Similarity=0.223  Sum_probs=66.2

Q ss_pred             CCCCeEEEEec-Ch--HHHHHHHHHHHcCCeEEEEeCCcHHH---HHHHHhcCCcEE--EcCCChhHHHHhh-------C
Q 018382          179 QSGLRGGILGL-GG--VGHMGVLIAKAMGHHVTVISSSDKKR---VEAMEHLGADQY--LVSSDATRMQEAA-------D  243 (357)
Q Consensus       179 ~~~~~VlI~G~-g~--~G~~ai~la~~~g~~V~~~~~~~~~~---~~~~~~~g~~~v--v~~~~~~~~~~~~-------~  243 (357)
                      -.++++||+|+ |.  +|.++++.+...|++|+++.++++..   +.+.+..+....  .|..+.+.++++.       +
T Consensus        29 l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  108 (293)
T 3grk_A           29 LQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKKWG  108 (293)
T ss_dssp             TTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             CCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcC
Confidence            35789999986 55  99999999988999999999886433   233333453222  3556654443332       3


Q ss_pred             CccEEEEcCCCCC-----------------------------ChHHHHhccccCCeEEEEccC
Q 018382          244 SLDYIIDTVPANH-----------------------------PLEPYLSLLKLDGKLILTGVI  277 (357)
Q Consensus       244 ~~d~v~d~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~g~~  277 (357)
                      ++|++++++|...                             ..+.++..++++|+++.++..
T Consensus       109 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~  171 (293)
T 3grk_A          109 KLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYY  171 (293)
T ss_dssp             CCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECG
T ss_pred             CCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeeh
Confidence            7999999998531                             122344456678999988654

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=97.29  E-value=0.0015  Score=57.41  Aligned_cols=97  Identities=15%  Similarity=0.148  Sum_probs=65.1

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCC------------cHHHHHHHH---hcCCcE---EEcCCChhHHHH
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSS------------DKKRVEAME---HLGADQ---YLVSSDATRMQE  240 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~------------~~~~~~~~~---~~g~~~---vv~~~~~~~~~~  240 (357)
                      .++++||+|+ +++|.++++.+...|++|++++++            .++.+.+.+   ..+...   ..|..+.+.+++
T Consensus         9 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   88 (287)
T 3pxx_A            9 QDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVSR   88 (287)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHHH
Confidence            5789999987 999999999999999999999876            333333222   234322   236666544433


Q ss_pred             hh-------CCccEEEEcCCCCC-----------------------ChHHHHhccccCCeEEEEcc
Q 018382          241 AA-------DSLDYIIDTVPANH-----------------------PLEPYLSLLKLDGKLILTGV  276 (357)
Q Consensus       241 ~~-------~~~d~v~d~~g~~~-----------------------~~~~~~~~l~~~G~~v~~g~  276 (357)
                      +.       +++|++++++|...                       ..+.++..++.+|+++.++.
T Consensus        89 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS  154 (287)
T 3pxx_A           89 ELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGS  154 (287)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECC
T ss_pred             HHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEecc
Confidence            22       37999999988631                       11234445667899998865

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=97.29  E-value=0.0015  Score=57.10  Aligned_cols=75  Identities=19%  Similarity=0.193  Sum_probs=54.9

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCCc---EEEcCCChhHHHHhh--------CC
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGAD---QYLVSSDATRMQEAA--------DS  244 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~~---~vv~~~~~~~~~~~~--------~~  244 (357)
                      .++++||+|+ |++|.++++.+...|++|+++++++++.+.+.+.   .|..   ...|..+++.++++.        ++
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   99 (273)
T 1ae1_A           20 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGK   99 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSC
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            4688999987 9999999999999999999999998766554332   2432   224555654443332        57


Q ss_pred             ccEEEEcCCC
Q 018382          245 LDYIIDTVPA  254 (357)
Q Consensus       245 ~d~v~d~~g~  254 (357)
                      +|++++++|.
T Consensus       100 id~lv~nAg~  109 (273)
T 1ae1_A          100 LNILVNNAGV  109 (273)
T ss_dssp             CCEEEECCCC
T ss_pred             CcEEEECCCC
Confidence            9999999985

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=97.28  E-value=0.0015  Score=57.15  Aligned_cols=75  Identities=13%  Similarity=0.123  Sum_probs=56.4

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcE--EEcCCChhHHHHhh-------CCccEEE
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQ--YLVSSDATRMQEAA-------DSLDYII  249 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~--vv~~~~~~~~~~~~-------~~~d~v~  249 (357)
                      .++++||+|+ |++|.++++.+...|++|+++++++++.+.+.+.+....  ..|..+.+.++++.       +++|++|
T Consensus         8 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv   87 (270)
T 1yde_A            8 AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVV   87 (270)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCeEEEcCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            5788999987 999999999999999999999999887776665454222  23555654443332       3799999


Q ss_pred             EcCCC
Q 018382          250 DTVPA  254 (357)
Q Consensus       250 d~~g~  254 (357)
                      +++|.
T Consensus        88 ~nAg~   92 (270)
T 1yde_A           88 NNAGH   92 (270)
T ss_dssp             ECCCC
T ss_pred             ECCCC
Confidence            99875

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=97.28  E-value=0.0012  Score=57.23  Aligned_cols=75  Identities=12%  Similarity=0.162  Sum_probs=51.4

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEE-eCCcHHHHHHHHh---cCCc---EEEcCCChhHHHHhh-------CC
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVI-SSSDKKRVEAMEH---LGAD---QYLVSSDATRMQEAA-------DS  244 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~-~~~~~~~~~~~~~---~g~~---~vv~~~~~~~~~~~~-------~~  244 (357)
                      .++++||+|+ +++|.++++.+...|++|+++ .+++++.+...+.   .|..   ...|..+.+.++++.       ++
T Consensus         7 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   86 (259)
T 3edm_A            7 TNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKFGE   86 (259)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHHCS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            5789999987 999999999998899999998 4555544433322   3422   224556654433332       37


Q ss_pred             ccEEEEcCCC
Q 018382          245 LDYIIDTVPA  254 (357)
Q Consensus       245 ~d~v~d~~g~  254 (357)
                      +|++++++|.
T Consensus        87 id~lv~nAg~   96 (259)
T 3edm_A           87 IHGLVHVAGG   96 (259)
T ss_dssp             EEEEEECCCC
T ss_pred             CCEEEECCCc
Confidence            9999999874

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=97.28  E-value=0.00091  Score=57.98  Aligned_cols=75  Identities=16%  Similarity=0.148  Sum_probs=56.0

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcC---Cc---EEEcCCChhHHHHhh-------CCc
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLG---AD---QYLVSSDATRMQEAA-------DSL  245 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g---~~---~vv~~~~~~~~~~~~-------~~~  245 (357)
                      .++++||+|+ |++|.++++.+...|++|+++++++++.+.+.+.+.   ..   ...|..+.+.++++.       +++
T Consensus         5 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   84 (257)
T 3imf_A            5 KEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFGRI   84 (257)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            4688999987 999999999999999999999999888776665442   22   124556654433332       379


Q ss_pred             cEEEEcCCC
Q 018382          246 DYIIDTVPA  254 (357)
Q Consensus       246 d~v~d~~g~  254 (357)
                      |++++++|.
T Consensus        85 d~lv~nAg~   93 (257)
T 3imf_A           85 DILINNAAG   93 (257)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999984

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=97.27  E-value=0.0015  Score=56.61  Aligned_cols=75  Identities=19%  Similarity=0.192  Sum_probs=54.7

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc---CCc---EEEcCCChhHHHHhh--------CC
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL---GAD---QYLVSSDATRMQEAA--------DS  244 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~---g~~---~vv~~~~~~~~~~~~--------~~  244 (357)
                      .++++||+|+ |++|.++++.+...|++|+++++++++.+.+.+.+   |..   ...|..+++.++++.        ++
T Consensus         8 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   87 (260)
T 2ae2_A            8 EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGK   87 (260)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            4688999987 99999999999889999999999887765544322   432   123556654443332        57


Q ss_pred             ccEEEEcCCC
Q 018382          245 LDYIIDTVPA  254 (357)
Q Consensus       245 ~d~v~d~~g~  254 (357)
                      +|++++++|.
T Consensus        88 id~lv~~Ag~   97 (260)
T 2ae2_A           88 LNILVNNAGI   97 (260)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999984

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=97.27  E-value=0.0014  Score=57.01  Aligned_cols=75  Identities=15%  Similarity=0.154  Sum_probs=54.6

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc-----CCcE---EEcCCChhHHHHhh-------C
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL-----GADQ---YLVSSDATRMQEAA-------D  243 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~-----g~~~---vv~~~~~~~~~~~~-------~  243 (357)
                      .++++||+|+ |++|.++++.+...|++|+++++++++.+.+.+.+     +...   ..|..+.+.++++.       +
T Consensus        12 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   91 (267)
T 1iy8_A           12 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFG   91 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4688999987 99999999999889999999999987765544322     4321   23666654443332       3


Q ss_pred             CccEEEEcCCC
Q 018382          244 SLDYIIDTVPA  254 (357)
Q Consensus       244 ~~d~v~d~~g~  254 (357)
                      ++|++++++|.
T Consensus        92 ~id~lv~nAg~  102 (267)
T 1iy8_A           92 RIDGFFNNAGI  102 (267)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCCc
Confidence            79999999875

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=97.26  E-value=0.0009  Score=58.42  Aligned_cols=98  Identities=14%  Similarity=0.162  Sum_probs=64.0

Q ss_pred             CCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEe-CCcHHHHHHHH---hcCCcE---EEcCCChhHHHHhh-------C
Q 018382          179 QSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVIS-SSDKKRVEAME---HLGADQ---YLVSSDATRMQEAA-------D  243 (357)
Q Consensus       179 ~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~-~~~~~~~~~~~---~~g~~~---vv~~~~~~~~~~~~-------~  243 (357)
                      ..++++||+|+ +++|.++++.+...|++|+++. +++++.+.+.+   ..|...   ..|..+.+.++++.       +
T Consensus        25 ~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  104 (267)
T 3u5t_A           25 ETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAFG  104 (267)
T ss_dssp             --CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            35789999987 9999999988888899999874 44444443332   234322   23666655444332       3


Q ss_pred             CccEEEEcCCCCC-------------------------ChHHHHhccccCCeEEEEcc
Q 018382          244 SLDYIIDTVPANH-------------------------PLEPYLSLLKLDGKLILTGV  276 (357)
Q Consensus       244 ~~d~v~d~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~  276 (357)
                      ++|++++++|...                         ..+.++..++++|+++.++.
T Consensus       105 ~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS  162 (267)
T 3u5t_A          105 GVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMST  162 (267)
T ss_dssp             CEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECC
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeC
Confidence            7999999998531                         12234455667899998865

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=97.26  E-value=0.0014  Score=57.10  Aligned_cols=76  Identities=14%  Similarity=0.141  Sum_probs=54.7

Q ss_pred             CCCeEEEEe---cChHHHHHHHHHHHcCCeEEEEeCCcHH-HHHHHHhcCCc---EEEcCCChhHHHHhh-------C--
Q 018382          180 SGLRGGILG---LGGVGHMGVLIAKAMGHHVTVISSSDKK-RVEAMEHLGAD---QYLVSSDATRMQEAA-------D--  243 (357)
Q Consensus       180 ~~~~VlI~G---~g~~G~~ai~la~~~g~~V~~~~~~~~~-~~~~~~~~g~~---~vv~~~~~~~~~~~~-------~--  243 (357)
                      .++++||+|   +|++|.++++.+...|++|+++++++++ .+.+.+.++..   ...|..+++.++++.       +  
T Consensus         6 ~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   85 (269)
T 2h7i_A            6 DGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGAG   85 (269)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCTT
T ss_pred             CCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhcCCCceEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            468899997   4899999999998899999999998765 35555545532   234666654433322       3  


Q ss_pred             -CccEEEEcCCCC
Q 018382          244 -SLDYIIDTVPAN  255 (357)
Q Consensus       244 -~~d~v~d~~g~~  255 (357)
                       ++|++++++|..
T Consensus        86 ~~iD~lv~nAg~~   98 (269)
T 2h7i_A           86 NKLDGVVHSIGFM   98 (269)
T ss_dssp             CCEEEEEECCCCC
T ss_pred             CCceEEEECCccC
Confidence             799999998853

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=97.26  E-value=0.002  Score=55.49  Aligned_cols=75  Identities=13%  Similarity=0.109  Sum_probs=54.8

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCc-HHHHHHHHhcCCcE---EEcCCChhHHHHh-------hCCccE
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSD-KKRVEAMEHLGADQ---YLVSSDATRMQEA-------ADSLDY  247 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~-~~~~~~~~~~g~~~---vv~~~~~~~~~~~-------~~~~d~  247 (357)
                      .++++||+|+ |++|.++++.+...|++|+++++++ ++.+...+..|...   ..|..+++.++++       .+++|+
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   85 (249)
T 2ew8_A            6 KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDI   85 (249)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCCCE
Confidence            4688999987 9999999999988999999999987 66554333356332   2456665544433       247999


Q ss_pred             EEEcCCC
Q 018382          248 IIDTVPA  254 (357)
Q Consensus       248 v~d~~g~  254 (357)
                      +++++|.
T Consensus        86 lv~nAg~   92 (249)
T 2ew8_A           86 LVNNAGI   92 (249)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999985

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=97.25  E-value=0.00083  Score=59.14  Aligned_cols=106  Identities=12%  Similarity=0.054  Sum_probs=68.5

Q ss_pred             hhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCC-----c-EEEcCCChhHHHHhh
Q 018382          170 SPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGA-----D-QYLVSSDATRMQEAA  242 (357)
Q Consensus       170 ~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~-----~-~vv~~~~~~~~~~~~  242 (357)
                      .+|.....--.+++++|+|+|++|.+++..+...|+ +|+++.|+.++.+.+.+.++.     . ..++..   .+.+..
T Consensus       116 ~~l~~~~~~l~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~---~l~~~l  192 (283)
T 3jyo_A          116 RGMEEGLPNAKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDAR---GIEDVI  192 (283)
T ss_dssp             HHHHHHCTTCCCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECST---THHHHH
T ss_pred             HHHHHhCcCcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHH---HHHHHH
Confidence            334433322468899999999999999999999999 799999999888766554541     1 122221   233344


Q ss_pred             CCccEEEEcCCCCCC----hHHHHhccccCCeEEEEccCC
Q 018382          243 DSLDYIIDTVPANHP----LEPYLSLLKLDGKLILTGVIN  278 (357)
Q Consensus       243 ~~~d~v~d~~g~~~~----~~~~~~~l~~~G~~v~~g~~~  278 (357)
                      ..+|+|+++++....    .......++++..++++-..+
T Consensus       193 ~~~DiVInaTp~Gm~~~~~~pi~~~~l~~~~~v~DlvY~P  232 (283)
T 3jyo_A          193 AAADGVVNATPMGMPAHPGTAFDVSCLTKDHWVGDVVYMP  232 (283)
T ss_dssp             HHSSEEEECSSTTSTTSCSCSSCGGGCCTTCEEEECCCSS
T ss_pred             hcCCEEEECCCCCCCCCCCCCCCHHHhCCCCEEEEecCCC
Confidence            479999999865311    111235567776666664433

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=97.25  E-value=0.0028  Score=56.04  Aligned_cols=98  Identities=16%  Similarity=0.166  Sum_probs=65.0

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcH--HHHHH---HHhcCCcEE---EcCCChhHHHHh-------hC
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDK--KRVEA---MEHLGADQY---LVSSDATRMQEA-------AD  243 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~--~~~~~---~~~~g~~~v---v~~~~~~~~~~~-------~~  243 (357)
                      .++++||+|+ +++|.++++.+...|++|+++.++.+  +.+.+   .+..|....   .|..+.+.++++       .+
T Consensus        48 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  127 (294)
T 3r3s_A           48 KDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREALG  127 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            5789999987 99999999999999999999887632  22222   223454322   255554443332       24


Q ss_pred             CccEEEEcCCCCC--------------------------ChHHHHhccccCCeEEEEccC
Q 018382          244 SLDYIIDTVPANH--------------------------PLEPYLSLLKLDGKLILTGVI  277 (357)
Q Consensus       244 ~~d~v~d~~g~~~--------------------------~~~~~~~~l~~~G~~v~~g~~  277 (357)
                      ++|++++++|...                          ..+.++..++++|+++.++..
T Consensus       128 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~  187 (294)
T 3r3s_A          128 GLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSI  187 (294)
T ss_dssp             CCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCG
T ss_pred             CCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCh
Confidence            7999999998521                          122344566778999988754

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=97.25  E-value=0.0012  Score=56.18  Aligned_cols=74  Identities=16%  Similarity=0.126  Sum_probs=55.5

Q ss_pred             CCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh----cCCcE---EEcCCChhHHHHhh-------CCc
Q 018382          181 GLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH----LGADQ---YLVSSDATRMQEAA-------DSL  245 (357)
Q Consensus       181 ~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~----~g~~~---vv~~~~~~~~~~~~-------~~~  245 (357)
                      ++++||+|+ |++|.++++.+...|++|++++++.++.+.+.+.    .+...   ..|..+++.++++.       +++
T Consensus         2 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   81 (235)
T 3l77_A            2 MKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGDV   81 (235)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSSC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCCC
Confidence            578999987 9999999999999999999999998876655432    34332   23666665555443       379


Q ss_pred             cEEEEcCCC
Q 018382          246 DYIIDTVPA  254 (357)
Q Consensus       246 d~v~d~~g~  254 (357)
                      |++++++|.
T Consensus        82 d~li~~Ag~   90 (235)
T 3l77_A           82 DVVVANAGL   90 (235)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCcc
Confidence            999999885

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=97.24  E-value=0.0014  Score=57.44  Aligned_cols=75  Identities=12%  Similarity=0.155  Sum_probs=54.4

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc---CCcE---EEcCCChhHHHHhh-------CCc
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL---GADQ---YLVSSDATRMQEAA-------DSL  245 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~---g~~~---vv~~~~~~~~~~~~-------~~~  245 (357)
                      .++++||+|+ |++|.++++.+...|++|+++++++++.+.+.+.+   |...   ..|..+.+.++++.       +++
T Consensus        21 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i  100 (277)
T 2rhc_B           21 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPV  100 (277)
T ss_dssp             TSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            4688999987 99999999999989999999999987765443323   4321   24555654433332       379


Q ss_pred             cEEEEcCCC
Q 018382          246 DYIIDTVPA  254 (357)
Q Consensus       246 d~v~d~~g~  254 (357)
                      |++|+++|.
T Consensus       101 D~lv~~Ag~  109 (277)
T 2rhc_B          101 DVLVNNAGR  109 (277)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999985

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=97.24  E-value=0.00078  Score=59.14  Aligned_cols=75  Identities=17%  Similarity=0.147  Sum_probs=57.3

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcE---EEcCCChhHHHHhh-------CCccEE
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQ---YLVSSDATRMQEAA-------DSLDYI  248 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~~-------~~~d~v  248 (357)
                      .++++||+|+ |++|.++++.+...|++|++++++.++.+.+.+.++...   ..|..+.+.++++.       +++|++
T Consensus         4 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~l   83 (281)
T 3m1a_A            4 SAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYGRVDVL   83 (281)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCSEE
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHhCCCCCEE
Confidence            4678999987 999999999999999999999999888777766566332   23555654444332       379999


Q ss_pred             EEcCCC
Q 018382          249 IDTVPA  254 (357)
Q Consensus       249 ~d~~g~  254 (357)
                      |+++|.
T Consensus        84 v~~Ag~   89 (281)
T 3m1a_A           84 VNNAGR   89 (281)
T ss_dssp             EECCCC
T ss_pred             EECCCc
Confidence            999885

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=97.23  E-value=0.001  Score=57.46  Aligned_cols=75  Identities=16%  Similarity=0.121  Sum_probs=55.3

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc---CCc---EEEcCCChhHHHHhh------CCcc
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL---GAD---QYLVSSDATRMQEAA------DSLD  246 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~---g~~---~vv~~~~~~~~~~~~------~~~d  246 (357)
                      .++++||+|+ +++|.++++.+...|++|+++++++++.+.+.+.+   |..   ...|..+.+.++++.      +++|
T Consensus         6 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~g~id   85 (252)
T 3h7a_A            6 RNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAHAPLE   85 (252)
T ss_dssp             CSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHSCEE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhhCCce
Confidence            5788999987 99999999999999999999999988766554433   432   123555654433322      4799


Q ss_pred             EEEEcCCC
Q 018382          247 YIIDTVPA  254 (357)
Q Consensus       247 ~v~d~~g~  254 (357)
                      ++++++|.
T Consensus        86 ~lv~nAg~   93 (252)
T 3h7a_A           86 VTIFNVGA   93 (252)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCc
Confidence            99999985

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=97.23  E-value=0.0018  Score=55.69  Aligned_cols=75  Identities=23%  Similarity=0.259  Sum_probs=54.8

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc---CCcE---EEcCCChhHHHHh-------hCCc
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL---GADQ---YLVSSDATRMQEA-------ADSL  245 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~---g~~~---vv~~~~~~~~~~~-------~~~~  245 (357)
                      .++++||+|+ |++|.++++.+...|++|++++++.++.+.+.+.+   |...   ..|..+++.++++       .+++
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i   85 (247)
T 2jah_A            6 QGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALGGL   85 (247)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            4688999987 99999999999889999999999987766554433   4321   2355665444332       2479


Q ss_pred             cEEEEcCCC
Q 018382          246 DYIIDTVPA  254 (357)
Q Consensus       246 d~v~d~~g~  254 (357)
                      |++++++|.
T Consensus        86 d~lv~nAg~   94 (247)
T 2jah_A           86 DILVNNAGI   94 (247)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999874

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=97.23  E-value=0.0017  Score=54.38  Aligned_cols=91  Identities=23%  Similarity=0.258  Sum_probs=63.3

Q ss_pred             eEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEE-EcCCChhHHHHhhCCccEEEEcCCCCC----
Q 018382          183 RGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQY-LVSSDATRMQEAADSLDYIIDTVPANH----  256 (357)
Q Consensus       183 ~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~v-v~~~~~~~~~~~~~~~d~v~d~~g~~~----  256 (357)
                      +|||+|+ |.+|..+++.+...|.+|+++++++++...+.  -+...+ .|..+.+.  +...++|+||.++|...    
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~--~~~~~~~~D~~d~~~--~~~~~~d~vi~~ag~~~~~~~   77 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH--KDINILQKDIFDLTL--SDLSDQNVVVDAYGISPDEAE   77 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC--SSSEEEECCGGGCCH--HHHTTCSEEEECCCSSTTTTT
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc--CCCeEEeccccChhh--hhhcCCCEEEECCcCCccccc
Confidence            5899987 99999999999999999999999988765443  233322 34444433  44568999999998741    


Q ss_pred             ----ChHHHHhccccC--CeEEEEccC
Q 018382          257 ----PLEPYLSLLKLD--GKLILTGVI  277 (357)
Q Consensus       257 ----~~~~~~~~l~~~--G~~v~~g~~  277 (357)
                          ....+++.++..  ++++.++..
T Consensus        78 ~~~~~~~~l~~a~~~~~~~~~v~~SS~  104 (221)
T 3ew7_A           78 KHVTSLDHLISVLNGTVSPRLLVVGGA  104 (221)
T ss_dssp             SHHHHHHHHHHHHCSCCSSEEEEECCC
T ss_pred             hHHHHHHHHHHHHHhcCCceEEEEecc
Confidence                123455555543  688877653

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=97.22  E-value=0.00088  Score=58.23  Aligned_cols=75  Identities=23%  Similarity=0.179  Sum_probs=54.8

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcE-EEcCCChhHHHHhh-------CCccEEEE
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQ-YLVSSDATRMQEAA-------DSLDYIID  250 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~-------~~~d~v~d  250 (357)
                      .++++||+|+ |++|.++++.+...|++|+++++++++.....+..+... ..|..+.+.++++.       +++|++++
T Consensus        26 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~  105 (260)
T 3gem_A           26 SSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQAGAVALYGDFSCETGIMAFIDLLKTQTSSLRAVVH  105 (260)
T ss_dssp             -CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHHTCEEEECCTTSHHHHHHHHHHHHHHCSCCSEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhcCCeEEECCCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence            4678999987 999999999998889999999998876544444366432 24666654433322       37999999


Q ss_pred             cCCC
Q 018382          251 TVPA  254 (357)
Q Consensus       251 ~~g~  254 (357)
                      ++|.
T Consensus       106 nAg~  109 (260)
T 3gem_A          106 NASE  109 (260)
T ss_dssp             CCCC
T ss_pred             CCCc
Confidence            9985

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=97.22  E-value=0.0021  Score=56.21  Aligned_cols=76  Identities=17%  Similarity=0.198  Sum_probs=53.5

Q ss_pred             CCCeEEEEec---ChHHHHHHHHHHHcCCeEEEEeCCcH---HHHHHHHhcCCc--EEEcCCChhHHHHhh-------CC
Q 018382          180 SGLRGGILGL---GGVGHMGVLIAKAMGHHVTVISSSDK---KRVEAMEHLGAD--QYLVSSDATRMQEAA-------DS  244 (357)
Q Consensus       180 ~~~~VlI~G~---g~~G~~ai~la~~~g~~V~~~~~~~~---~~~~~~~~~g~~--~vv~~~~~~~~~~~~-------~~  244 (357)
                      .++++||+|+   |++|.++++.+...|++|++++++++   ..+.+.+..|..  ...|..+.+.++++.       ++
T Consensus         5 ~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   84 (275)
T 2pd4_A            5 KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLGS   84 (275)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4688999975   69999999999888999999998875   344444434522  224666654443332       37


Q ss_pred             ccEEEEcCCCC
Q 018382          245 LDYIIDTVPAN  255 (357)
Q Consensus       245 ~d~v~d~~g~~  255 (357)
                      +|++++++|..
T Consensus        85 id~lv~nAg~~   95 (275)
T 2pd4_A           85 LDFIVHSVAFA   95 (275)
T ss_dssp             EEEEEECCCCC
T ss_pred             CCEEEECCccC
Confidence            99999999853

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=97.22  E-value=0.0019  Score=56.16  Aligned_cols=76  Identities=14%  Similarity=0.121  Sum_probs=53.0

Q ss_pred             CCCeEEEEec---ChHHHHHHHHHHHcCCeEEEEeCCc---HHHHHHHHhcCCcE--EEcCCChhHHHHhh-------CC
Q 018382          180 SGLRGGILGL---GGVGHMGVLIAKAMGHHVTVISSSD---KKRVEAMEHLGADQ--YLVSSDATRMQEAA-------DS  244 (357)
Q Consensus       180 ~~~~VlI~G~---g~~G~~ai~la~~~g~~V~~~~~~~---~~~~~~~~~~g~~~--vv~~~~~~~~~~~~-------~~  244 (357)
                      .++++||+|+   |++|.++++.+...|++|+++++++   +..+.+.+..+...  ..|..+.+.++++.       ++
T Consensus         8 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   87 (265)
T 1qsg_A            8 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPK   87 (265)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCSS
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            4678999975   6999999999988999999999876   33444444344322  24666655444332       27


Q ss_pred             ccEEEEcCCCC
Q 018382          245 LDYIIDTVPAN  255 (357)
Q Consensus       245 ~d~v~d~~g~~  255 (357)
                      +|++++++|..
T Consensus        88 iD~lv~~Ag~~   98 (265)
T 1qsg_A           88 FDGFVHSIGFA   98 (265)
T ss_dssp             EEEEEECCCCC
T ss_pred             CCEEEECCCCC
Confidence            99999999853

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=97.22  E-value=0.00094  Score=59.39  Aligned_cols=76  Identities=16%  Similarity=0.150  Sum_probs=56.4

Q ss_pred             CCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc---CCc---EEEcCCChhHHHHhh-------CC
Q 018382          179 QSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL---GAD---QYLVSSDATRMQEAA-------DS  244 (357)
Q Consensus       179 ~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~---g~~---~vv~~~~~~~~~~~~-------~~  244 (357)
                      -.++++||+|+ |++|.++++.+...|++|+++++++++.+.+.+.+   +..   ...|..+.+.++++.       ++
T Consensus        29 l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  108 (301)
T 3tjr_A           29 FDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLGG  108 (301)
T ss_dssp             STTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCCC
Confidence            36789999987 99999999999999999999999988776654433   322   224556654443332       37


Q ss_pred             ccEEEEcCCC
Q 018382          245 LDYIIDTVPA  254 (357)
Q Consensus       245 ~d~v~d~~g~  254 (357)
                      +|++|+++|.
T Consensus       109 id~lvnnAg~  118 (301)
T 3tjr_A          109 VDVVFSNAGI  118 (301)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCc
Confidence            9999999985

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=97.21  E-value=0.00087  Score=58.83  Aligned_cols=76  Identities=17%  Similarity=0.203  Sum_probs=55.5

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCCc---EEEcCCChhHHHHhh-------CCc
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGAD---QYLVSSDATRMQEAA-------DSL  245 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~~---~vv~~~~~~~~~~~~-------~~~  245 (357)
                      .++++||+|+ |++|.++++.+...|++|+++++++++.+.+.+.   .|..   ...|..+.+.++++.       +++
T Consensus        31 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~i  110 (276)
T 3r1i_A           31 SGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELGGI  110 (276)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999987 9999999999989999999999988776554443   2321   224666655444332       379


Q ss_pred             cEEEEcCCCC
Q 018382          246 DYIIDTVPAN  255 (357)
Q Consensus       246 d~v~d~~g~~  255 (357)
                      |++++++|..
T Consensus       111 D~lvnnAg~~  120 (276)
T 3r1i_A          111 DIAVCNAGIV  120 (276)
T ss_dssp             SEEEECCCCC
T ss_pred             CEEEECCCCC
Confidence            9999998863

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=97.21  E-value=0.0022  Score=55.86  Aligned_cols=89  Identities=22%  Similarity=0.197  Sum_probs=65.5

Q ss_pred             CCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCC----
Q 018382          181 GLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANH----  256 (357)
Q Consensus       181 ~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~----  256 (357)
                      +++++|+|+|++|.+++..+...|.+|++..|+.++.+.+. ++|.. .....+      +. .+|+||+|++...    
T Consensus       118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~~ka~~la-~~~~~-~~~~~~------l~-~~DiVInaTp~Gm~~~~  188 (269)
T 3phh_A          118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSSRGLDFFQ-RLGCD-CFMEPP------KS-AFDLIINATSASLHNEL  188 (269)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-HHTCE-EESSCC------SS-CCSEEEECCTTCCCCSC
T ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HCCCe-EecHHH------hc-cCCEEEEcccCCCCCCC
Confidence            88999999999999999999999999999999999988777 48843 333322      12 7999999986541    


Q ss_pred             ChH--HHHhccccCCeEEEEccCC
Q 018382          257 PLE--PYLSLLKLDGKLILTGVIN  278 (357)
Q Consensus       257 ~~~--~~~~~l~~~G~~v~~g~~~  278 (357)
                      .+.  .+...++++..++++...+
T Consensus       189 ~l~~~~l~~~l~~~~~v~D~vY~P  212 (269)
T 3phh_A          189 PLNKEVLKGYFKEGKLAYDLAYGF  212 (269)
T ss_dssp             SSCHHHHHHHHHHCSEEEESCCSS
T ss_pred             CCChHHHHhhCCCCCEEEEeCCCC
Confidence            121  1223677888888775543

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=97.21  E-value=0.0014  Score=56.59  Aligned_cols=75  Identities=19%  Similarity=0.288  Sum_probs=55.5

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc---CCc---EEEcCCChhHHHHhh-------CCc
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL---GAD---QYLVSSDATRMQEAA-------DSL  245 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~---g~~---~vv~~~~~~~~~~~~-------~~~  245 (357)
                      .++++||+|+ |++|.++++.+...|++|+++++++++.+.+.+.+   +..   ...|..+.+.++++.       +++
T Consensus         8 ~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   87 (253)
T 3qiv_A            8 ENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEFGGI   87 (253)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999987 99999999999999999999999988766655433   322   123555554433332       389


Q ss_pred             cEEEEcCCC
Q 018382          246 DYIIDTVPA  254 (357)
Q Consensus       246 d~v~d~~g~  254 (357)
                      |++++++|.
T Consensus        88 d~li~~Ag~   96 (253)
T 3qiv_A           88 DYLVNNAAI   96 (253)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCc
Confidence            999999985

>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3

Probab=97.21  E-value=0.0013  Score=61.88  Aligned_cols=91  Identities=21%  Similarity=0.181  Sum_probs=71.7

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCCCh
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPL  258 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~~  258 (357)
                      -.|++|.|+|.|.+|..+++.++.+|++|++..++..+...+.. .|.. +.      .++++....|+|+.+.+....+
T Consensus       255 l~GktVgIIG~G~IG~~vA~~l~~~G~~Viv~d~~~~~~~~a~~-~g~~-~~------~l~ell~~aDiVi~~~~t~~lI  326 (479)
T 1v8b_A          255 ISGKIVVICGYGDVGKGCASSMKGLGARVYITEIDPICAIQAVM-EGFN-VV------TLDEIVDKGDFFITCTGNVDVI  326 (479)
T ss_dssp             CTTSEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHT-TTCE-EC------CHHHHTTTCSEEEECCSSSSSB
T ss_pred             cCCCEEEEEeeCHHHHHHHHHHHhCcCEEEEEeCChhhHHHHHH-cCCE-ec------CHHHHHhcCCEEEECCChhhhc
Confidence            57899999999999999999999999999999998776544444 5653 21      2455667899999998776555


Q ss_pred             -HHHHhccccCCeEEEEccC
Q 018382          259 -EPYLSLLKLDGKLILTGVI  277 (357)
Q Consensus       259 -~~~~~~l~~~G~~v~~g~~  277 (357)
                       ...++.|+++..++.++-.
T Consensus       327 ~~~~l~~MK~gailiNvgrg  346 (479)
T 1v8b_A          327 KLEHLLKMKNNAVVGNIGHF  346 (479)
T ss_dssp             CHHHHTTCCTTCEEEECSST
T ss_pred             CHHHHhhcCCCcEEEEeCCC
Confidence             3678899999999988653

>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*

Probab=97.21  E-value=0.0014  Score=62.02  Aligned_cols=91  Identities=19%  Similarity=0.207  Sum_probs=71.1

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCCCh
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPL  258 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~~  258 (357)
                      -.|++|.|+|.|.+|..+++.++.+|++|++.+++..+...... .|... .      .++++....|+|+.+++....+
T Consensus       275 L~GktVgIIG~G~IG~~vA~~l~~~G~~V~v~d~~~~~~~~a~~-~G~~~-~------~l~ell~~aDiVi~~~~t~~lI  346 (494)
T 3d64_A          275 IAGKIAVVAGYGDVGKGCAQSLRGLGATVWVTEIDPICALQAAM-EGYRV-V------TMEYAADKADIFVTATGNYHVI  346 (494)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSCHHHHHHHHT-TTCEE-C------CHHHHTTTCSEEEECSSSSCSB
T ss_pred             cCCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCChHhHHHHHH-cCCEe-C------CHHHHHhcCCEEEECCCccccc
Confidence            47899999999999999999999999999999998766433333 56532 1      2455667899999998766455


Q ss_pred             -HHHHhccccCCeEEEEccC
Q 018382          259 -EPYLSLLKLDGKLILTGVI  277 (357)
Q Consensus       259 -~~~~~~l~~~G~~v~~g~~  277 (357)
                       ...++.|+++..++.++-.
T Consensus       347 ~~~~l~~MK~gAilINvgrg  366 (494)
T 3d64_A          347 NHDHMKAMRHNAIVCNIGHF  366 (494)
T ss_dssp             CHHHHHHCCTTEEEEECSSS
T ss_pred             CHHHHhhCCCCcEEEEcCCC
Confidence             4678899999999988653

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=97.21  E-value=0.001  Score=57.95  Aligned_cols=76  Identities=13%  Similarity=0.116  Sum_probs=55.8

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc---CCcE---EEcCCChhHHHHh-------hCCc
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL---GADQ---YLVSSDATRMQEA-------ADSL  245 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~---g~~~---vv~~~~~~~~~~~-------~~~~  245 (357)
                      .++++||+|+ |++|.++++.+...|++|+++++++++.+.+.+.+   |...   ..|..+.+.++++       .+++
T Consensus         3 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   82 (264)
T 3tfo_A            3 MDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGRI   82 (264)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            4678999987 99999999999999999999999988766655433   4322   2466665443333       2379


Q ss_pred             cEEEEcCCCC
Q 018382          246 DYIIDTVPAN  255 (357)
Q Consensus       246 d~v~d~~g~~  255 (357)
                      |++++++|..
T Consensus        83 D~lVnnAG~~   92 (264)
T 3tfo_A           83 DVLVNNAGVM   92 (264)
T ss_dssp             CEEEECCCCC
T ss_pred             CEEEECCCCC
Confidence            9999999853

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=97.20  E-value=0.0014  Score=55.63  Aligned_cols=73  Identities=12%  Similarity=0.082  Sum_probs=55.9

Q ss_pred             CeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCc---EEEcCCChhHHHHhh----CCccEEEEcCC
Q 018382          182 LRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGAD---QYLVSSDATRMQEAA----DSLDYIIDTVP  253 (357)
Q Consensus       182 ~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~~~----~~~d~v~d~~g  253 (357)
                      +++||+|+ |++|.++++.+...|++|+++++++++.+.+.+.++..   ...|..+.+.++++.    ..+|++++++|
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~lv~~Ag   81 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQLDSIPSTVVHSAG   81 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTCSSCCCEEECCTTCHHHHHHHHHSCSSCCSEEEECCC
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhccCeEeecCCCHHHHHHHHHHHhhcCCEEEEeCC
Confidence            46899987 99999999999999999999999999888887766532   234666665555443    24699999988


Q ss_pred             C
Q 018382          254 A  254 (357)
Q Consensus       254 ~  254 (357)
                      .
T Consensus        82 ~   82 (230)
T 3guy_A           82 S   82 (230)
T ss_dssp             C
T ss_pred             c
Confidence            5

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=97.19  E-value=0.0022  Score=56.00  Aligned_cols=100  Identities=17%  Similarity=0.188  Sum_probs=66.7

Q ss_pred             CCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCc-HHHHHHHH---hcCCcE---EEcCCChhHHHHhh-------C
Q 018382          179 QSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSD-KKRVEAME---HLGADQ---YLVSSDATRMQEAA-------D  243 (357)
Q Consensus       179 ~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~-~~~~~~~~---~~g~~~---vv~~~~~~~~~~~~-------~  243 (357)
                      -.++++||+|+ +++|.++++.+...|++|+++.+.. ++.+.+.+   ..|...   ..|..+.+.++++.       +
T Consensus        16 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   95 (270)
T 3is3_A           16 LDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFG   95 (270)
T ss_dssp             CTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            35788999987 9999999999999999999977643 33333222   245332   23555654433332       3


Q ss_pred             CccEEEEcCCCCC-------------------------ChHHHHhccccCCeEEEEccCC
Q 018382          244 SLDYIIDTVPANH-------------------------PLEPYLSLLKLDGKLILTGVIN  278 (357)
Q Consensus       244 ~~d~v~d~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~~~  278 (357)
                      ++|++++++|...                         ..+.++..++++|+++.++...
T Consensus        96 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~  155 (270)
T 3is3_A           96 HLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNT  155 (270)
T ss_dssp             CCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTT
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCch
Confidence            7999999988531                         1234555677789999987644

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=97.18  E-value=0.0015  Score=56.66  Aligned_cols=75  Identities=13%  Similarity=0.143  Sum_probs=54.4

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc-----C-CcE--EEcCCChhHHHHhhC------C
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL-----G-ADQ--YLVSSDATRMQEAAD------S  244 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~-----g-~~~--vv~~~~~~~~~~~~~------~  244 (357)
                      .++++||+|+ |++|.++++.+...|++|+++++++++.+.+.+.+     + ...  ..|..+++.++++..      +
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   85 (260)
T 2z1n_A            6 QGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLGG   85 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence            4688999987 99999999999889999999999987766554433     3 112  246666554443321      5


Q ss_pred             ccEEEEcCCC
Q 018382          245 LDYIIDTVPA  254 (357)
Q Consensus       245 ~d~v~d~~g~  254 (357)
                      +|++|+++|.
T Consensus        86 id~lv~~Ag~   95 (260)
T 2z1n_A           86 ADILVYSTGG   95 (260)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999985

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=97.18  E-value=0.0017  Score=57.10  Aligned_cols=75  Identities=21%  Similarity=0.264  Sum_probs=55.8

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc---CCc---EEEcCCChhHHHHh-------hCCc
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL---GAD---QYLVSSDATRMQEA-------ADSL  245 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~---g~~---~vv~~~~~~~~~~~-------~~~~  245 (357)
                      +++++||+|+ +++|.++++.+...|++|++++++.++.+.+.+.+   |..   ...|..+++.++++       .+++
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  106 (283)
T 3v8b_A           27 PSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKFGHL  106 (283)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            5788999987 99999999999899999999999988777665544   222   12355565443332       2379


Q ss_pred             cEEEEcCCC
Q 018382          246 DYIIDTVPA  254 (357)
Q Consensus       246 d~v~d~~g~  254 (357)
                      |++++++|.
T Consensus       107 D~lVnnAg~  115 (283)
T 3v8b_A          107 DIVVANAGI  115 (283)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999985

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=97.17  E-value=0.0018  Score=55.94  Aligned_cols=74  Identities=18%  Similarity=0.210  Sum_probs=53.6

Q ss_pred             CCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc---CCc---EEEcCCChhHHHHhh-------CCcc
Q 018382          181 GLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL---GAD---QYLVSSDATRMQEAA-------DSLD  246 (357)
Q Consensus       181 ~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~---g~~---~vv~~~~~~~~~~~~-------~~~d  246 (357)
                      ++++||+|+ |++|.++++.+...|++|+++++++++.+.+.+.+   |..   ...|..+.+.++++.       +++|
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   81 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFD   81 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence            468999987 99999999999989999999999887665544322   422   123666654444332       3799


Q ss_pred             EEEEcCCC
Q 018382          247 YIIDTVPA  254 (357)
Q Consensus       247 ~v~d~~g~  254 (357)
                      ++|+++|.
T Consensus        82 ~lv~nAg~   89 (256)
T 1geg_A           82 VIVNNAGV   89 (256)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999875

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=97.17  E-value=0.00095  Score=63.09  Aligned_cols=95  Identities=17%  Similarity=0.142  Sum_probs=66.3

Q ss_pred             CCCeEEEEecChHHHHHHHHHHHc-CCeEEEEeCCcHHHHHHHHhcCCcE-EEcCCChhHHHHhhCCccEEEEcCCCCCC
Q 018382          180 SGLRGGILGLGGVGHMGVLIAKAM-GHHVTVISSSDKKRVEAMEHLGADQ-YLVSSDATRMQEAADSLDYIIDTVPANHP  257 (357)
Q Consensus       180 ~~~~VlI~G~g~~G~~ai~la~~~-g~~V~~~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~~~~d~v~d~~g~~~~  257 (357)
                      ++.+|+|+|+|.+|.+++..+... +.+|+++.++.++.+.+.+..+... .+|..+.+.+.+...++|+|+++++....
T Consensus        22 ~~k~VlIiGAGgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~~l~~~DvVIn~tp~~~~  101 (467)
T 2axq_A           22 MGKNVLLLGSGFVAQPVIDTLAANDDINVTVACRTLANAQALAKPSGSKAISLDVTDDSALDKVLADNDVVISLIPYTFH  101 (467)
T ss_dssp             -CEEEEEECCSTTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGGGTCEEEECCTTCHHHHHHHHHTSSEEEECSCGGGH
T ss_pred             CCCEEEEECChHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhcCCcEEEEecCCHHHHHHHHcCCCEEEECCchhhh
Confidence            456899999999999999888877 6799999999888776665334432 34555554555555689999999987522


Q ss_pred             hHHHHhccccCCeEEEE
Q 018382          258 LEPYLSLLKLDGKLILT  274 (357)
Q Consensus       258 ~~~~~~~l~~~G~~v~~  274 (357)
                      ......+++++-.++..
T Consensus       102 ~~v~~a~l~~g~~vvd~  118 (467)
T 2axq_A          102 PNVVKSAIRTKTDVVTS  118 (467)
T ss_dssp             HHHHHHHHHHTCEEEEC
T ss_pred             HHHHHHHHhcCCEEEEe
Confidence            22344556666666654

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=97.17  E-value=0.0015  Score=56.49  Aligned_cols=75  Identities=16%  Similarity=0.183  Sum_probs=55.9

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcE-E--EcCCChhHHHHh-------hCCccEE
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQ-Y--LVSSDATRMQEA-------ADSLDYI  248 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~-v--v~~~~~~~~~~~-------~~~~d~v  248 (357)
                      .++++||+|+ |++|.++++.+...|++|+++++++++.+.+.+.++... .  .|..+.+.++++       .+++|++
T Consensus         5 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l   84 (253)
T 1hxh_A            5 QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVL   84 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            4678999987 999999999998889999999999887776666565332 2  355555443332       2368999


Q ss_pred             EEcCCC
Q 018382          249 IDTVPA  254 (357)
Q Consensus       249 ~d~~g~  254 (357)
                      ++++|.
T Consensus        85 v~~Ag~   90 (253)
T 1hxh_A           85 VNNAGI   90 (253)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999985

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=97.17  E-value=0.00032  Score=60.03  Aligned_cols=95  Identities=12%  Similarity=0.081  Sum_probs=67.3

Q ss_pred             CeEEEEec-ChHHHHHHHHHHHcC-CeEEEEeCCcHHHHHHHHhcCCc-EEEcCCChhHHHHhhCCccEEEEcCCCCCC-
Q 018382          182 LRGGILGL-GGVGHMGVLIAKAMG-HHVTVISSSDKKRVEAMEHLGAD-QYLVSSDATRMQEAADSLDYIIDTVPANHP-  257 (357)
Q Consensus       182 ~~VlI~G~-g~~G~~ai~la~~~g-~~V~~~~~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~-  257 (357)
                      ++|||+|+ |.+|.++++.+...| .+|+++++++++...+.. .+.. ...|..+.+.++++..++|+||.+++.... 
T Consensus        24 k~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~~-~~~~~~~~Dl~d~~~~~~~~~~~D~vv~~a~~~~~~  102 (236)
T 3qvo_A           24 KNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYP-TNSQIIMGDVLNHAALKQAMQGQDIVYANLTGEDLD  102 (236)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSCC-TTEEEEECCTTCHHHHHHHHTTCSEEEEECCSTTHH
T ss_pred             cEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhccccc-CCcEEEEecCCCHHHHHHHhcCCCEEEEcCCCCchh
Confidence            57999987 999999999999999 799999998776433211 1222 224666777777777899999999987522 


Q ss_pred             --hHHHHhccccC--CeEEEEccC
Q 018382          258 --LEPYLSLLKLD--GKLILTGVI  277 (357)
Q Consensus       258 --~~~~~~~l~~~--G~~v~~g~~  277 (357)
                        .+.+++.++..  +++|.++..
T Consensus       103 ~~~~~~~~~~~~~~~~~iV~iSS~  126 (236)
T 3qvo_A          103 IQANSVIAAMKACDVKRLIFVLSL  126 (236)
T ss_dssp             HHHHHHHHHHHHTTCCEEEEECCC
T ss_pred             HHHHHHHHHHHHcCCCEEEEEecc
Confidence              23344445443  588888654

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=97.16  E-value=0.0014  Score=56.47  Aligned_cols=76  Identities=16%  Similarity=0.176  Sum_probs=55.3

Q ss_pred             CCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc-----C--Cc--EEEcCCChhHHHHh-------
Q 018382          179 QSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL-----G--AD--QYLVSSDATRMQEA-------  241 (357)
Q Consensus       179 ~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~-----g--~~--~vv~~~~~~~~~~~-------  241 (357)
                      ..++++||+|+ |++|.++++.+...|++|+++++++++.+.+.+.+     +  ..  ...|..+.+.++++       
T Consensus         5 ~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   84 (250)
T 3nyw_A            5 KQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQK   84 (250)
T ss_dssp             CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHh
Confidence            35788999987 99999999988888999999999988766655432     2  11  22456665443332       


Q ss_pred             hCCccEEEEcCCC
Q 018382          242 ADSLDYIIDTVPA  254 (357)
Q Consensus       242 ~~~~d~v~d~~g~  254 (357)
                      .+++|++++++|.
T Consensus        85 ~g~iD~lvnnAg~   97 (250)
T 3nyw_A           85 YGAVDILVNAAAM   97 (250)
T ss_dssp             HCCEEEEEECCCC
T ss_pred             cCCCCEEEECCCc
Confidence            2379999999986

>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}

Probab=97.16  E-value=0.0021  Score=51.84  Aligned_cols=97  Identities=14%  Similarity=0.186  Sum_probs=67.6

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHc-CCeEEEEeCCcHHHHHHHHh---cCCc--EEEcCCChhHHHHhhCCccEEEEcC
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAM-GHHVTVISSSDKKRVEAMEH---LGAD--QYLVSSDATRMQEAADSLDYIIDTV  252 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~-g~~V~~~~~~~~~~~~~~~~---~g~~--~vv~~~~~~~~~~~~~~~d~v~d~~  252 (357)
                      +++++||.+|+|. |..++.+++.. +.+|++++.+++..+.+++.   .|..  ..+..+..+.+....+.+|+|+...
T Consensus        24 ~~~~~vldiG~G~-G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~i~~~~  102 (178)
T 3hm2_A           24 KPHETLWDIGGGS-GSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRIAVQQGAPRAFDDVPDNPDVIFIGG  102 (178)
T ss_dssp             CTTEEEEEESTTT-THHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSEEEECCTTGGGGGCCSCCSEEEECC
T ss_pred             cCCCeEEEeCCCC-CHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCEEEecchHhhhhccCCCCCEEEECC
Confidence            7889999999875 88888888877 56999999998877766653   3432  2232222232332236799999655


Q ss_pred             CCC--CChHHHHhccccCCeEEEEcc
Q 018382          253 PAN--HPLEPYLSLLKLDGKLILTGV  276 (357)
Q Consensus       253 g~~--~~~~~~~~~l~~~G~~v~~g~  276 (357)
                      ...  ..++.+.+.|+++|+++....
T Consensus       103 ~~~~~~~l~~~~~~L~~gG~l~~~~~  128 (178)
T 3hm2_A          103 GLTAPGVFAAAWKRLPVGGRLVANAV  128 (178)
T ss_dssp             -TTCTTHHHHHHHTCCTTCEEEEEEC
T ss_pred             cccHHHHHHHHHHhcCCCCEEEEEee
Confidence            433  257889999999999986643

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=97.16  E-value=0.002  Score=56.25  Aligned_cols=75  Identities=16%  Similarity=0.228  Sum_probs=54.9

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCC--c-E--EEcCCChhHHHHhh-------CCcc
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGA--D-Q--YLVSSDATRMQEAA-------DSLD  246 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~--~-~--vv~~~~~~~~~~~~-------~~~d  246 (357)
                      .++++||+|+ |++|.++++.+...|++|++++++.++.+.+.+.++.  . .  ..|..+.+.++++.       +++|
T Consensus        15 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   94 (278)
T 2bgk_A           15 QDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLD   94 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            4688999987 9999999999988999999999987776655544542  1 1  23555554444332       3799


Q ss_pred             EEEEcCCC
Q 018382          247 YIIDTVPA  254 (357)
Q Consensus       247 ~v~d~~g~  254 (357)
                      ++|+++|.
T Consensus        95 ~li~~Ag~  102 (278)
T 2bgk_A           95 IMFGNVGV  102 (278)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCcc
Confidence            99999874

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=97.15  E-value=0.0012  Score=57.46  Aligned_cols=75  Identities=19%  Similarity=0.184  Sum_probs=55.0

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc---C-Cc-E--EEcCCChhHHHHhh-------CC
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL---G-AD-Q--YLVSSDATRMQEAA-------DS  244 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~---g-~~-~--vv~~~~~~~~~~~~-------~~  244 (357)
                      .++++||+|+ |++|.++++.+...|++|+++++++++.+.+.+.+   + .. .  ..|..+++.++++.       ++
T Consensus         9 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   88 (262)
T 3pk0_A            9 QGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFGG   88 (262)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            5788999986 99999999999999999999999988766554433   3 11 1  23555654444332       38


Q ss_pred             ccEEEEcCCC
Q 018382          245 LDYIIDTVPA  254 (357)
Q Consensus       245 ~d~v~d~~g~  254 (357)
                      +|++++++|.
T Consensus        89 id~lvnnAg~   98 (262)
T 3pk0_A           89 IDVVCANAGV   98 (262)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999885

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=97.15  E-value=0.00084  Score=56.53  Aligned_cols=93  Identities=13%  Similarity=0.055  Sum_probs=65.1

Q ss_pred             eEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCc-EEEcCCC-hhHHHHhhCCccEEEEcCCCCC---
Q 018382          183 RGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGAD-QYLVSSD-ATRMQEAADSLDYIIDTVPANH---  256 (357)
Q Consensus       183 ~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~-~vv~~~~-~~~~~~~~~~~d~v~d~~g~~~---  256 (357)
                      +|||+|+ |.+|..+++.+...|.+|+++++++++....   .+.. ...|..+ .+.+.+...++|+||.+++...   
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ag~~~~~~   78 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY---NNVKAVHFDVDWTPEEMAKQLHGMDAIINVSGSGGKSL   78 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC---TTEEEEECCTTSCHHHHHTTTTTCSEEEECCCCTTSSC
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc---CCceEEEecccCCHHHHHHHHcCCCEEEECCcCCCCCc
Confidence            6899987 9999999999998999999999987664322   1222 1246666 6677777779999999998642   


Q ss_pred             ------ChHHHHhccccC--CeEEEEccCC
Q 018382          257 ------PLEPYLSLLKLD--GKLILTGVIN  278 (357)
Q Consensus       257 ------~~~~~~~~l~~~--G~~v~~g~~~  278 (357)
                            .....++.++..  ++++.++...
T Consensus        79 ~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~  108 (219)
T 3dqp_A           79 LKVDLYGAVKLMQAAEKAEVKRFILLSTIF  108 (219)
T ss_dssp             CCCCCHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred             EeEeHHHHHHHHHHHHHhCCCEEEEECccc
Confidence                  022344444433  4788886643

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.15  E-value=0.0012  Score=57.88  Aligned_cols=75  Identities=17%  Similarity=0.258  Sum_probs=54.6

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc---C---Cc---EEEcCCChhHHHHhh-------
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL---G---AD---QYLVSSDATRMQEAA-------  242 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~---g---~~---~vv~~~~~~~~~~~~-------  242 (357)
                      .++++||+|+ |++|.++++.+...|++|+++++++++.+.+.+.+   +   ..   ...|..+++.++++.       
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (278)
T 1spx_A            5 AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKF   84 (278)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHHc
Confidence            4678999987 99999999998889999999999988776655444   2   11   124566655444332       


Q ss_pred             CCccEEEEcCCC
Q 018382          243 DSLDYIIDTVPA  254 (357)
Q Consensus       243 ~~~d~v~d~~g~  254 (357)
                      +++|++|+++|.
T Consensus        85 g~id~lv~~Ag~   96 (278)
T 1spx_A           85 GKLDILVNNAGA   96 (278)
T ss_dssp             SCCCEEEECCC-
T ss_pred             CCCCEEEECCCC
Confidence            389999999875

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=97.13  E-value=0.0012  Score=57.32  Aligned_cols=97  Identities=14%  Similarity=0.084  Sum_probs=63.7

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcH---HHHHHHHhc---CCcE---EEcCCChhHHHHhh-------
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDK---KRVEAMEHL---GADQ---YLVSSDATRMQEAA-------  242 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~---~~~~~~~~~---g~~~---vv~~~~~~~~~~~~-------  242 (357)
                      .++++||+|+ +++|.++++.+...|++|+++.++..   +.+.+.+.+   |...   ..|..+.+.++++.       
T Consensus        10 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   89 (262)
T 3ksu_A           10 KNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKEF   89 (262)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            5789999987 99999999999889999999876532   333333222   4321   23666655444332       


Q ss_pred             CCccEEEEcCCCCC-------------------------ChHHHHhccccCCeEEEEcc
Q 018382          243 DSLDYIIDTVPANH-------------------------PLEPYLSLLKLDGKLILTGV  276 (357)
Q Consensus       243 ~~~d~v~d~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~  276 (357)
                      +++|++++++|...                         ..+.+...|+++|+++.++.
T Consensus        90 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS  148 (262)
T 3ksu_A           90 GKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIAT  148 (262)
T ss_dssp             CSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECC
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEec
Confidence            37999999998420                         12223445567899998865

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=97.12  E-value=0.0011  Score=57.55  Aligned_cols=75  Identities=11%  Similarity=0.117  Sum_probs=54.8

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCCcE---EEcCCChhHHHHhh-------CCc
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGADQ---YLVSSDATRMQEAA-------DSL  245 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~~~---vv~~~~~~~~~~~~-------~~~  245 (357)
                      .++++||+|+ |++|.++++.+...|++|+++++++++.+.+.+.   .|...   ..|..+.+.++++.       +++
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   90 (256)
T 3gaf_A           11 NDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFGKI   90 (256)
T ss_dssp             TTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999987 9999999998888899999999998776655442   34322   23555654433332       379


Q ss_pred             cEEEEcCCC
Q 018382          246 DYIIDTVPA  254 (357)
Q Consensus       246 d~v~d~~g~  254 (357)
                      |++++++|.
T Consensus        91 d~lv~nAg~   99 (256)
T 3gaf_A           91 TVLVNNAGG   99 (256)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999885

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=97.12  E-value=0.0016  Score=57.13  Aligned_cols=76  Identities=17%  Similarity=0.190  Sum_probs=54.4

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc---CCcE---EEcCCChhHHHHh-------hCCc
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL---GADQ---YLVSSDATRMQEA-------ADSL  245 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~---g~~~---vv~~~~~~~~~~~-------~~~~  245 (357)
                      .++++||+|+ |++|.++++.+...|++|+++++++++.+.+.+.+   |...   ..|..+.+.++++       .+++
T Consensus        23 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  102 (279)
T 3sju_A           23 RPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFGPI  102 (279)
T ss_dssp             --CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHCSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            5788999987 99999999998888999999999988766554433   4322   2355665443332       2379


Q ss_pred             cEEEEcCCCC
Q 018382          246 DYIIDTVPAN  255 (357)
Q Consensus       246 d~v~d~~g~~  255 (357)
                      |++++++|..
T Consensus       103 d~lv~nAg~~  112 (279)
T 3sju_A          103 GILVNSAGRN  112 (279)
T ss_dssp             CEEEECCCCC
T ss_pred             cEEEECCCCC
Confidence            9999999863

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=97.12  E-value=0.0022  Score=55.31  Aligned_cols=76  Identities=16%  Similarity=0.210  Sum_probs=54.3

Q ss_pred             CCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc----C--Cc-EEEcC--CChhHHHHh-------
Q 018382          179 QSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL----G--AD-QYLVS--SDATRMQEA-------  241 (357)
Q Consensus       179 ~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~----g--~~-~vv~~--~~~~~~~~~-------  241 (357)
                      -.++++||+|+ |++|.++++.+...|++|+++++++++.+.+.+.+    +  .. ...|.  .+.+.++++       
T Consensus        10 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (252)
T 3f1l_A           10 LNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAVN   89 (252)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHHh
Confidence            35789999987 99999999999889999999999988766554422    2  11 22344  444433332       


Q ss_pred             hCCccEEEEcCCC
Q 018382          242 ADSLDYIIDTVPA  254 (357)
Q Consensus       242 ~~~~d~v~d~~g~  254 (357)
                      .+++|++++++|.
T Consensus        90 ~g~id~lv~nAg~  102 (252)
T 3f1l_A           90 YPRLDGVLHNAGL  102 (252)
T ss_dssp             CSCCSEEEECCCC
T ss_pred             CCCCCEEEECCcc
Confidence            1379999999985

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=97.11  E-value=0.0023  Score=55.48  Aligned_cols=75  Identities=12%  Similarity=0.204  Sum_probs=54.6

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc---CCcE---EEcCCChhHHHHh-------hCCc
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL---GADQ---YLVSSDATRMQEA-------ADSL  245 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~---g~~~---vv~~~~~~~~~~~-------~~~~  245 (357)
                      .++++||+|+ |++|.++++.+...|++|+++++++++.+.+.+.+   |...   ..|..+.+.++++       .+++
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   85 (262)
T 1zem_A            6 NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKI   85 (262)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            5688999987 99999999999999999999999887765544433   4322   2355665443332       2379


Q ss_pred             cEEEEcCCC
Q 018382          246 DYIIDTVPA  254 (357)
Q Consensus       246 d~v~d~~g~  254 (357)
                      |++++++|.
T Consensus        86 d~lv~nAg~   94 (262)
T 1zem_A           86 DFLFNNAGY   94 (262)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999874

>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}

Probab=97.11  E-value=0.004  Score=52.52  Aligned_cols=117  Identities=13%  Similarity=0.058  Sum_probs=72.0

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcH-HHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCCC
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDK-KRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHP  257 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~-~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~  257 (357)
                      -.+++|||+|+|.+|...++.+...|++|+++++... ....+.+ .|.-..+.. .  +......++|+||-+++.. .
T Consensus        29 L~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~~~~l~~l~~-~~~i~~i~~-~--~~~~dL~~adLVIaAT~d~-~  103 (223)
T 3dfz_A           29 LKGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPTVSAEINEWEA-KGQLRVKRK-K--VGEEDLLNVFFIVVATNDQ-A  103 (223)
T ss_dssp             CTTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSSCCHHHHHHHH-TTSCEEECS-C--CCGGGSSSCSEEEECCCCT-H
T ss_pred             cCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHH-cCCcEEEEC-C--CCHhHhCCCCEEEECCCCH-H
Confidence            3578999999999999999999999999999987643 3444444 342222221 1  1112235899999999988 5


Q ss_pred             hHHHHhccccCCeEEEEccCCCCcccchHHHh-hccceEEEEee
Q 018382          258 LEPYLSLLKLDGKLILTGVINTPMQFLTPMVM-LGRKAITGSFI  300 (357)
Q Consensus       258 ~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~i~g~~~  300 (357)
                      .+..+...+..|..|.....+...+|.....+ ...+++.-+..
T Consensus       104 ~N~~I~~~ak~gi~VNvvD~p~~~~f~~Paiv~rg~l~iaIST~  147 (223)
T 3dfz_A          104 VNKFVKQHIKNDQLVNMASSFSDGNIQIPAQFSRGRLSLAISTD  147 (223)
T ss_dssp             HHHHHHHHSCTTCEEEC-----CCSEECCEEEEETTEEEEEECT
T ss_pred             HHHHHHHHHhCCCEEEEeCCcccCeEEEeeEEEeCCEEEEEECC
Confidence            55544444458888887665544444444332 33455544443

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=97.11  E-value=0.0026  Score=55.31  Aligned_cols=75  Identities=13%  Similarity=0.104  Sum_probs=55.0

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh----cCCc--E--EEcCCChhHHHHh-------hC
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH----LGAD--Q--YLVSSDATRMQEA-------AD  243 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~----~g~~--~--vv~~~~~~~~~~~-------~~  243 (357)
                      .++++||+|+ +++|.++++.+...|++|+++++++++.+.+.+.    .+..  .  ..|..+.+.++++       .+
T Consensus         7 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   86 (265)
T 3lf2_A            7 SEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTLG   86 (265)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            5789999987 9999999999999999999999998876655443    3322  1  2356665443332       24


Q ss_pred             CccEEEEcCCC
Q 018382          244 SLDYIIDTVPA  254 (357)
Q Consensus       244 ~~d~v~d~~g~  254 (357)
                      ++|++++++|.
T Consensus        87 ~id~lvnnAg~   97 (265)
T 3lf2_A           87 CASILVNNAGQ   97 (265)
T ss_dssp             SCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999985

>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}

Probab=97.11  E-value=0.0016  Score=54.29  Aligned_cols=96  Identities=19%  Similarity=0.132  Sum_probs=67.1

Q ss_pred             CCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc---CCc--EEEcCCChhHHHHhhCCccEEEEcC
Q 018382          178 KQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL---GAD--QYLVSSDATRMQEAADSLDYIIDTV  252 (357)
Q Consensus       178 ~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~---g~~--~vv~~~~~~~~~~~~~~~d~v~d~~  252 (357)
                      .+++++||-+|+| .|..++.+++. +.+|+.++.+++..+.+++.+   |..  .++..+..+.. ...+.+|+|+...
T Consensus        75 ~~~~~~vLdiG~G-~G~~~~~la~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-~~~~~~D~i~~~~  151 (210)
T 3lbf_A           75 LTPQSRVLEIGTG-SGYQTAILAHL-VQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGW-QARAPFDAIIVTA  151 (210)
T ss_dssp             CCTTCEEEEECCT-TSHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCC-GGGCCEEEEEESS
T ss_pred             CCCCCEEEEEcCC-CCHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCC-ccCCCccEEEEcc
Confidence            3889999999987 47778888887 789999999998877766533   422  22222111111 1135799999876


Q ss_pred             CCCCChHHHHhccccCCeEEEEcc
Q 018382          253 PANHPLEPYLSLLKLDGKLILTGV  276 (357)
Q Consensus       253 g~~~~~~~~~~~l~~~G~~v~~g~  276 (357)
                      .-......+.+.|+++|+++..-.
T Consensus       152 ~~~~~~~~~~~~L~pgG~lv~~~~  175 (210)
T 3lbf_A          152 APPEIPTALMTQLDEGGILVLPVG  175 (210)
T ss_dssp             BCSSCCTHHHHTEEEEEEEEEEEC
T ss_pred             chhhhhHHHHHhcccCcEEEEEEc
Confidence            655456678999999999887543

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=97.11  E-value=0.0014  Score=57.35  Aligned_cols=75  Identities=16%  Similarity=0.170  Sum_probs=54.8

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCCc---EEEcCCChhHHHHhh-------CCc
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGAD---QYLVSSDATRMQEAA-------DSL  245 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~~---~vv~~~~~~~~~~~~-------~~~  245 (357)
                      .++++||+|+ |++|.++++.+...|++|+++++++++.+.+.+.   .|..   ...|..+.+.++++.       +++
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  106 (270)
T 3ftp_A           27 DKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFGAL  106 (270)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence            5688999987 9999999999988999999999998776554432   2321   234666654443332       379


Q ss_pred             cEEEEcCCC
Q 018382          246 DYIIDTVPA  254 (357)
Q Consensus       246 d~v~d~~g~  254 (357)
                      |++++++|.
T Consensus       107 D~lvnnAg~  115 (270)
T 3ftp_A          107 NVLVNNAGI  115 (270)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999985

>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}

Probab=97.11  E-value=0.0016  Score=54.63  Aligned_cols=97  Identities=25%  Similarity=0.283  Sum_probs=68.0

Q ss_pred             CCCCCeEEEEecChHHHHHHHHHHHcC--CeEEEEeCCcHHHHHHHHhc---CCc--EEEcCCChhHHHHhhCCccEEEE
Q 018382          178 KQSGLRGGILGLGGVGHMGVLIAKAMG--HHVTVISSSDKKRVEAMEHL---GAD--QYLVSSDATRMQEAADSLDYIID  250 (357)
Q Consensus       178 ~~~~~~VlI~G~g~~G~~ai~la~~~g--~~V~~~~~~~~~~~~~~~~~---g~~--~vv~~~~~~~~~~~~~~~d~v~d  250 (357)
                      +.++++||.+|+| .|..+..+++..+  .+|+.++.+++..+.+++.+   |..  .++..+..... ...+.+|+|+.
T Consensus        75 ~~~~~~vLdiG~G-~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~v~~  152 (215)
T 2yxe_A           75 LKPGMKVLEIGTG-CGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGY-EPLAPYDRIYT  152 (215)
T ss_dssp             CCTTCEEEEECCT-TSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCC-GGGCCEEEEEE
T ss_pred             CCCCCEEEEECCC-ccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCC-CCCCCeeEEEE
Confidence            4789999999987 4888889998876  79999999988777666532   322  22221111111 11347999998


Q ss_pred             cCCCCCChHHHHhccccCCeEEEEcc
Q 018382          251 TVPANHPLEPYLSLLKLDGKLILTGV  276 (357)
Q Consensus       251 ~~g~~~~~~~~~~~l~~~G~~v~~g~  276 (357)
                      ...-......+.+.|+++|+++..-.
T Consensus       153 ~~~~~~~~~~~~~~L~pgG~lv~~~~  178 (215)
T 2yxe_A          153 TAAGPKIPEPLIRQLKDGGKLLMPVG  178 (215)
T ss_dssp             SSBBSSCCHHHHHTEEEEEEEEEEES
T ss_pred             CCchHHHHHHHHHHcCCCcEEEEEEC
Confidence            76665456788999999999887643

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=97.11  E-value=0.0035  Score=56.88  Aligned_cols=75  Identities=19%  Similarity=0.294  Sum_probs=53.9

Q ss_pred             CCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHH-----------HHHHHHhcCCcE---EEcCCChhHHHHhh-
Q 018382          179 QSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKK-----------RVEAMEHLGADQ---YLVSSDATRMQEAA-  242 (357)
Q Consensus       179 ~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~-----------~~~~~~~~g~~~---vv~~~~~~~~~~~~-  242 (357)
                      -.++++||+|+ +++|.++++.+...|++|+++++++++           .+.+.+ .|...   ..|..+.+.++++. 
T Consensus        43 l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~-~g~~~~~~~~Dv~d~~~v~~~~~  121 (346)
T 3kvo_A           43 LAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEA-VGGKALPCIVDVRDEQQISAAVE  121 (346)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHH-TTCEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHh-cCCeEEEEEccCCCHHHHHHHHH
Confidence            36789999987 999999999998889999999988763           222333 45322   24666655444332 


Q ss_pred             ------CCccEEEEcCCC
Q 018382          243 ------DSLDYIIDTVPA  254 (357)
Q Consensus       243 ------~~~d~v~d~~g~  254 (357)
                            +++|++++++|.
T Consensus       122 ~~~~~~g~iDilVnnAG~  139 (346)
T 3kvo_A          122 KAIKKFGGIDILVNNASA  139 (346)
T ss_dssp             HHHHHHSCCCEEEECCCC
T ss_pred             HHHHHcCCCCEEEECCCC
Confidence                  389999999985

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=97.10  E-value=0.002  Score=58.42  Aligned_cols=76  Identities=18%  Similarity=0.111  Sum_probs=59.4

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHc-CC-eEEEEeCCcHHHHHHHHhcC---Cc-EEEcCCChhHHHHhhCCccEEEEcC
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAM-GH-HVTVISSSDKKRVEAMEHLG---AD-QYLVSSDATRMQEAADSLDYIIDTV  252 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~-g~-~V~~~~~~~~~~~~~~~~~g---~~-~vv~~~~~~~~~~~~~~~d~v~d~~  252 (357)
                      .+++|||+|+ |.+|..+++.+... |. +|+++++++.+...+.+.+.   .. ...|..+.+.+.++..++|+||.++
T Consensus        20 ~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~D~Vih~A   99 (344)
T 2gn4_A           20 DNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYALEGVDICIHAA   99 (344)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHHHTTTCSEEEECC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhcCCEEEECC
Confidence            4688999987 99999999888877 98 99999999887766655443   21 2246667777777777999999999


Q ss_pred             CCC
Q 018382          253 PAN  255 (357)
Q Consensus       253 g~~  255 (357)
                      +..
T Consensus       100 a~~  102 (344)
T 2gn4_A          100 ALK  102 (344)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            865

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=97.10  E-value=0.0015  Score=56.83  Aligned_cols=76  Identities=11%  Similarity=0.115  Sum_probs=55.8

Q ss_pred             CCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc---CCcE---EEcCCChhHHHHhh-------CC
Q 018382          179 QSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL---GADQ---YLVSSDATRMQEAA-------DS  244 (357)
Q Consensus       179 ~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~---g~~~---vv~~~~~~~~~~~~-------~~  244 (357)
                      -.++++||+|+ +++|.+.++.+...|++|+++++++++.+.+.+.+   |...   ..|..+.+.++++.       ++
T Consensus         9 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   88 (264)
T 3ucx_A            9 LTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYGR   88 (264)
T ss_dssp             TTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred             cCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            36789999987 99999999999899999999999988766554433   4221   23666655443332       37


Q ss_pred             ccEEEEcCCC
Q 018382          245 LDYIIDTVPA  254 (357)
Q Consensus       245 ~d~v~d~~g~  254 (357)
                      +|++++++|.
T Consensus        89 id~lv~nAg~   98 (264)
T 3ucx_A           89 VDVVINNAFR   98 (264)
T ss_dssp             CSEEEECCCS
T ss_pred             CcEEEECCCC
Confidence            9999999865

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=97.10  E-value=0.0014  Score=58.01  Aligned_cols=75  Identities=21%  Similarity=0.202  Sum_probs=55.4

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCC----c---EEEcCCChhHHHHh-------hCC
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGA----D---QYLVSSDATRMQEA-------ADS  244 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~----~---~vv~~~~~~~~~~~-------~~~  244 (357)
                      .++++||+|+ |++|.++++.+...|++|+++++++++.+.+.+.+..    .   ...|..+.+.++++       .++
T Consensus        40 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  119 (293)
T 3rih_A           40 SARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFGA  119 (293)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence            5788999987 9999999999999999999999998876665554421    1   12456665443332       247


Q ss_pred             ccEEEEcCCC
Q 018382          245 LDYIIDTVPA  254 (357)
Q Consensus       245 ~d~v~d~~g~  254 (357)
                      +|++++++|.
T Consensus       120 iD~lvnnAg~  129 (293)
T 3rih_A          120 LDVVCANAGI  129 (293)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999885

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=97.10  E-value=0.00079  Score=59.27  Aligned_cols=95  Identities=19%  Similarity=0.116  Sum_probs=67.5

Q ss_pred             eEEEEec-ChHHHHHHHHHHHc-CCeEEEEeCCcHHHHHHHHhcCCcE-EEcCCChhHHHHhhCCccEEEEcCCCCCC--
Q 018382          183 RGGILGL-GGVGHMGVLIAKAM-GHHVTVISSSDKKRVEAMEHLGADQ-YLVSSDATRMQEAADSLDYIIDTVPANHP--  257 (357)
Q Consensus       183 ~VlI~G~-g~~G~~ai~la~~~-g~~V~~~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~~~~d~v~d~~g~~~~--  257 (357)
                      +|||+|+ |.+|..+++.+... |.+|++++++.++...+.. .+... ..|..+++.+.+...++|+||.+++....  
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~~-~~v~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~~~~   80 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWR-GKVSVRQLDYFNQESMVEAFKGMDTVVFIPSIIHPSF   80 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGGB-TTBEEEECCTTCHHHHHHHTTTCSEEEECCCCCCSHH
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhhh-CCCEEEEcCCCCHHHHHHHHhCCCEEEEeCCCCccch
Confidence            5899987 99999999998877 8999999998876543322 34432 34677777788888899999999886422  


Q ss_pred             -----hHHHHhccccC--CeEEEEccCC
Q 018382          258 -----LEPYLSLLKLD--GKLILTGVIN  278 (357)
Q Consensus       258 -----~~~~~~~l~~~--G~~v~~g~~~  278 (357)
                           ....++.++..  ++++.++...
T Consensus        81 ~~~~~~~~l~~aa~~~gv~~iv~~Ss~~  108 (289)
T 3e48_A           81 KRIPEVENLVYAAKQSGVAHIIFIGYYA  108 (289)
T ss_dssp             HHHHHHHHHHHHHHHTTCCEEEEEEESC
T ss_pred             hhHHHHHHHHHHHHHcCCCEEEEEcccC
Confidence                 22344444443  4788776543

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=97.10  E-value=0.0019  Score=60.78  Aligned_cols=94  Identities=16%  Similarity=0.128  Sum_probs=64.5

Q ss_pred             CCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcE--EEcCCChhHHHHhhCCccEEEEcCCCCCCh
Q 018382          181 GLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQ--YLVSSDATRMQEAADSLDYIIDTVPANHPL  258 (357)
Q Consensus       181 ~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~--vv~~~~~~~~~~~~~~~d~v~d~~g~~~~~  258 (357)
                      +++|+|+|+|.+|.++++.+...|.+|++++++.++.+.+.+.++...  .+|..+.+.+.++..++|+|+++++.....
T Consensus         3 ~k~VlViGaG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~~~DvVIn~a~~~~~~   82 (450)
T 1ff9_A            3 TKSVLMLGSGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIPYTFHA   82 (450)
T ss_dssp             CCEEEEECCSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECCC--CHH
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHHHcCCcEEEECCccccch
Confidence            568999999999999998888889999999998877766555454222  235555555556666899999999875222


Q ss_pred             HHHHhccccCCeEEEE
Q 018382          259 EPYLSLLKLDGKLILT  274 (357)
Q Consensus       259 ~~~~~~l~~~G~~v~~  274 (357)
                      .....+++++-.++..
T Consensus        83 ~i~~a~l~~g~~vvd~   98 (450)
T 1ff9_A           83 TVIKSAIRQKKHVVTT   98 (450)
T ss_dssp             HHHHHHHHHTCEEEES
T ss_pred             HHHHHHHhCCCeEEEe
Confidence            2344556665555544

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=97.10  E-value=0.0016  Score=57.25  Aligned_cols=75  Identities=19%  Similarity=0.258  Sum_probs=55.5

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc---CCcE-E--EcCCChhHHHHhh-------CCc
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL---GADQ-Y--LVSSDATRMQEAA-------DSL  245 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~---g~~~-v--v~~~~~~~~~~~~-------~~~  245 (357)
                      .++++||+|+ |++|.++++.+...|++|+++++++++.+.+.+.+   +... .  .|..+.+.++++.       +++
T Consensus         7 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   86 (280)
T 3tox_A            7 EGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFGGL   86 (280)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            5788999987 99999999999899999999999988877666544   3222 1  2555554433332       379


Q ss_pred             cEEEEcCCC
Q 018382          246 DYIIDTVPA  254 (357)
Q Consensus       246 d~v~d~~g~  254 (357)
                      |++++++|.
T Consensus        87 D~lvnnAg~   95 (280)
T 3tox_A           87 DTAFNNAGA   95 (280)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999984

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=97.10  E-value=0.0018  Score=55.61  Aligned_cols=75  Identities=19%  Similarity=0.298  Sum_probs=53.2

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeC-CcHHHHHHHHh---cCCcE---EEcCCChhHHHHhh-------CC
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISS-SDKKRVEAMEH---LGADQ---YLVSSDATRMQEAA-------DS  244 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~-~~~~~~~~~~~---~g~~~---vv~~~~~~~~~~~~-------~~  244 (357)
                      .++++||+|+ |++|.++++.+...|++|+++++ ++++.+.+.+.   .+...   ..|..+.+.++++.       ++
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   82 (246)
T 2uvd_A            3 KGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFGQ   82 (246)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4678999987 99999999999889999999998 66655444332   34321   23556654443332       37


Q ss_pred             ccEEEEcCCC
Q 018382          245 LDYIIDTVPA  254 (357)
Q Consensus       245 ~d~v~d~~g~  254 (357)
                      +|++++++|.
T Consensus        83 id~lv~nAg~   92 (246)
T 2uvd_A           83 VDILVNNAGV   92 (246)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999985

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=97.09  E-value=0.0028  Score=55.40  Aligned_cols=74  Identities=18%  Similarity=0.139  Sum_probs=54.8

Q ss_pred             CeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCC--c---EEEcCCChhHHHHhh-------CCccEE
Q 018382          182 LRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGA--D---QYLVSSDATRMQEAA-------DSLDYI  248 (357)
Q Consensus       182 ~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~--~---~vv~~~~~~~~~~~~-------~~~d~v  248 (357)
                      +++||+|+ |++|.++++.+...|++|+++++++++.+.+.+.+..  .   ...|..+.+.++++.       +++|++
T Consensus        22 k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  101 (272)
T 2nwq_A           22 STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFATLRGL  101 (272)
T ss_dssp             CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGGSSCCEE
T ss_pred             cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            67899987 9999999999988999999999998877766554432  1   124566655544432       268999


Q ss_pred             EEcCCCC
Q 018382          249 IDTVPAN  255 (357)
Q Consensus       249 ~d~~g~~  255 (357)
                      ++++|..
T Consensus       102 vnnAG~~  108 (272)
T 2nwq_A          102 INNAGLA  108 (272)
T ss_dssp             EECCCCC
T ss_pred             EECCCCC
Confidence            9998753

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=97.09  E-value=0.002  Score=55.88  Aligned_cols=75  Identities=16%  Similarity=0.192  Sum_probs=53.7

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHH-HHHHHHhc----CCcE-E--EcCCChhHHHHhh-------C
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKK-RVEAMEHL----GADQ-Y--LVSSDATRMQEAA-------D  243 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~-~~~~~~~~----g~~~-v--v~~~~~~~~~~~~-------~  243 (357)
                      .++++||+|+ |++|.++++.+...|++|+++++++++ .+.+.+.+    |... .  .|..+.+.++++.       +
T Consensus         3 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   82 (260)
T 1x1t_A            3 KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMG   82 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            4678999987 999999999998899999999998776 55444323    4332 2  3555554433332       3


Q ss_pred             CccEEEEcCCC
Q 018382          244 SLDYIIDTVPA  254 (357)
Q Consensus       244 ~~d~v~d~~g~  254 (357)
                      ++|++|+++|.
T Consensus        83 ~iD~lv~~Ag~   93 (260)
T 1x1t_A           83 RIDILVNNAGI   93 (260)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999885

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=97.09  E-value=0.00094  Score=58.22  Aligned_cols=76  Identities=18%  Similarity=0.194  Sum_probs=55.1

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh----cCCcE---EEcCCChhHHHHh-------hCC
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH----LGADQ---YLVSSDATRMQEA-------ADS  244 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~----~g~~~---vv~~~~~~~~~~~-------~~~  244 (357)
                      .++++||+|+ +++|.++++.+...|++|+++++++++.+.+.+.    .+...   ..|..+.+.++++       .++
T Consensus        19 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   98 (266)
T 4egf_A           19 DGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAFGG   98 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHHTS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            5788999987 9999999999999999999999998876655432    34322   2355554433332       248


Q ss_pred             ccEEEEcCCCC
Q 018382          245 LDYIIDTVPAN  255 (357)
Q Consensus       245 ~d~v~d~~g~~  255 (357)
                      +|++++++|..
T Consensus        99 id~lv~nAg~~  109 (266)
T 4egf_A           99 LDVLVNNAGIS  109 (266)
T ss_dssp             CSEEEEECCCC
T ss_pred             CCEEEECCCcC
Confidence            99999998853

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=97.08  E-value=0.00071  Score=59.06  Aligned_cols=74  Identities=14%  Similarity=0.069  Sum_probs=52.7

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCC-cEEEcCCChhHHHHhh-------CCccEEEE
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGA-DQYLVSSDATRMQEAA-------DSLDYIID  250 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~-~~vv~~~~~~~~~~~~-------~~~d~v~d  250 (357)
                      .++++||+|+ |++|.++++.+...|++|++++++.++.+.+.. -.. ....|..+.+.++++.       +++|++++
T Consensus        15 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvn   93 (266)
T 3p19_A           15 MKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALNL-PNTLCAQVDVTDKYTFDTAITRAEKIYGPADAIVN   93 (266)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTCC-TTEEEEECCTTCHHHHHHHHHHHHHHHCSEEEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhhc-CCceEEEecCCCHHHHHHHHHHHHHHCCCCCEEEE
Confidence            4688999987 999999999999999999999998776543322 111 1224555654433322       38999999


Q ss_pred             cCCC
Q 018382          251 TVPA  254 (357)
Q Consensus       251 ~~g~  254 (357)
                      ++|.
T Consensus        94 nAg~   97 (266)
T 3p19_A           94 NAGM   97 (266)
T ss_dssp             CCCC
T ss_pred             CCCc
Confidence            9985

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=97.08  E-value=0.002  Score=55.74  Aligned_cols=73  Identities=15%  Similarity=0.176  Sum_probs=53.7

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEE--EcCCChhHHHHh-------hCCccEEE
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQY--LVSSDATRMQEA-------ADSLDYII  249 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~v--v~~~~~~~~~~~-------~~~~d~v~  249 (357)
                      .++++||+|+ |++|.++++.+...|++|+++++++++ +.+.+.++. ..  .|..+.+.++++       .+++|+++
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv   82 (256)
T 2d1y_A            5 AGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIGG-AFFQVDLEDERERVRFVEEAAYALGRVDVLV   82 (256)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHTC-EEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhhC-CEEEeeCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            4688999987 999999999998899999999998877 544443542 32  355555433332       23799999


Q ss_pred             EcCCC
Q 018382          250 DTVPA  254 (357)
Q Consensus       250 d~~g~  254 (357)
                      +++|.
T Consensus        83 ~~Ag~   87 (256)
T 2d1y_A           83 NNAAI   87 (256)
T ss_dssp             ECCCC
T ss_pred             ECCCC
Confidence            99885

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=97.08  E-value=0.001  Score=55.06  Aligned_cols=95  Identities=16%  Similarity=0.111  Sum_probs=64.4

Q ss_pred             CeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcE-EEcCCChhHHHHhhCCccEEEEcCCCCCC--
Q 018382          182 LRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQ-YLVSSDATRMQEAADSLDYIIDTVPANHP--  257 (357)
Q Consensus       182 ~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~~~~d~v~d~~g~~~~--  257 (357)
                      .+|||+|+ |.+|..+++.+...|.+|+++++++++...... .+... ..|..+.+.+.+...++|+||.+++....  
T Consensus         4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~~~~~   82 (206)
T 1hdo_A            4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGP-RPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTRNDLS   82 (206)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSC-CCSEEEESCTTSHHHHHHHHTTCSEEEECCCCTTCCS
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccccC-CceEEEEecCCCHHHHHHHHcCCCEEEECccCCCCCC
Confidence            68999987 999999999998889999999998765432111 12222 23556666677777789999999986421  


Q ss_pred             --------hHHHHhcccc--CCeEEEEccC
Q 018382          258 --------LEPYLSLLKL--DGKLILTGVI  277 (357)
Q Consensus       258 --------~~~~~~~l~~--~G~~v~~g~~  277 (357)
                              ....++.++.  .++++.++..
T Consensus        83 ~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~  112 (206)
T 1hdo_A           83 PTTVMSEGARNIVAAMKAHGVDKVVACTSA  112 (206)
T ss_dssp             CCCHHHHHHHHHHHHHHHHTCCEEEEECCG
T ss_pred             ccchHHHHHHHHHHHHHHhCCCeEEEEeee
Confidence                    2233333333  3578877543

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=97.08  E-value=0.0021  Score=55.72  Aligned_cols=75  Identities=13%  Similarity=0.104  Sum_probs=53.8

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCCcE---EEcCCChhHHHHh-------hCCc
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGADQ---YLVSSDATRMQEA-------ADSL  245 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~~~---vv~~~~~~~~~~~-------~~~~  245 (357)
                      .++++||+|+ |++|.++++.+...|++|+++++++++.+.+.+.   .+...   ..|..+.+.++++       .+++
T Consensus        13 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   92 (260)
T 2zat_A           13 ENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGGV   92 (260)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            4688999987 9999999999988999999999988766544332   24321   2355555443332       2379


Q ss_pred             cEEEEcCCC
Q 018382          246 DYIIDTVPA  254 (357)
Q Consensus       246 d~v~d~~g~  254 (357)
                      |++|+++|.
T Consensus        93 D~lv~~Ag~  101 (260)
T 2zat_A           93 DILVSNAAV  101 (260)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999884

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=97.07  E-value=0.0019  Score=54.89  Aligned_cols=75  Identities=15%  Similarity=0.113  Sum_probs=55.3

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcE--EEcCCChhHHHHh-------hCCccEEE
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQ--YLVSSDATRMQEA-------ADSLDYII  249 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~--vv~~~~~~~~~~~-------~~~~d~v~  249 (357)
                      .++++||+|+ |++|.++++.+...|++|++++++.++.+.+.+.++...  ..|..+.+.++++       .+++|+++
T Consensus         4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li   83 (234)
T 2ehd_A            4 MKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGALPLPGDVREEGDWARAVAAMEEAFGELSALV   83 (234)
T ss_dssp             CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhhceEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            3568999987 999999999998899999999999887776665454222  2355555443332       23799999


Q ss_pred             EcCCC
Q 018382          250 DTVPA  254 (357)
Q Consensus       250 d~~g~  254 (357)
                      +++|.
T Consensus        84 ~~Ag~   88 (234)
T 2ehd_A           84 NNAGV   88 (234)
T ss_dssp             ECCCC
T ss_pred             ECCCc
Confidence            99885

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=97.07  E-value=0.002  Score=55.37  Aligned_cols=74  Identities=15%  Similarity=0.113  Sum_probs=54.0

Q ss_pred             CCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc----CCc-E--EEcCCChhHHHHhh-------CCc
Q 018382          181 GLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL----GAD-Q--YLVSSDATRMQEAA-------DSL  245 (357)
Q Consensus       181 ~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~----g~~-~--vv~~~~~~~~~~~~-------~~~  245 (357)
                      ++++||+|+ |++|.+++..+...|++|+++++++++.+.+.+.+    +.. .  ..|..+.+.++++.       +++
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAI   81 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            568999987 99999999999889999999999987776655433    322 1  23555554444332       379


Q ss_pred             cEEEEcCCC
Q 018382          246 DYIIDTVPA  254 (357)
Q Consensus       246 d~v~d~~g~  254 (357)
                      |++|+++|.
T Consensus        82 d~li~~Ag~   90 (250)
T 2cfc_A           82 DVLVNNAGI   90 (250)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999874

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=97.07  E-value=0.0017  Score=56.33  Aligned_cols=75  Identities=15%  Similarity=0.186  Sum_probs=55.2

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc---CCc---EEEcCCChhHHHHh-------hCCc
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL---GAD---QYLVSSDATRMQEA-------ADSL  245 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~---g~~---~vv~~~~~~~~~~~-------~~~~  245 (357)
                      .++++||+|+ |++|.++++.+...|++|+++++++++.+.+.+.+   |..   ...|..+.+.++++       .+.+
T Consensus        28 ~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i  107 (262)
T 3rkr_A           28 SGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHGRC  107 (262)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence            5788999987 99999999999888999999999988766554433   322   22455555443332       2379


Q ss_pred             cEEEEcCCC
Q 018382          246 DYIIDTVPA  254 (357)
Q Consensus       246 d~v~d~~g~  254 (357)
                      |++++++|.
T Consensus       108 d~lv~~Ag~  116 (262)
T 3rkr_A          108 DVLVNNAGV  116 (262)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCCc
Confidence            999999986

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=97.07  E-value=0.0017  Score=57.00  Aligned_cols=75  Identities=20%  Similarity=0.214  Sum_probs=54.1

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCC--c-EE--EcCCChhHHHHhh-------CCcc
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGA--D-QY--LVSSDATRMQEAA-------DSLD  246 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~--~-~v--v~~~~~~~~~~~~-------~~~d  246 (357)
                      .++++||+|+ |++|.++++.+...|++|+++++++++.+.+.+.+..  . ..  .|..+.+.++++.       +++|
T Consensus        28 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD  107 (276)
T 2b4q_A           28 AGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGELSARLD  107 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHHCSCCS
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence            4688999987 9999999999998999999999998776655443421  1 11  3555554433322       3799


Q ss_pred             EEEEcCCC
Q 018382          247 YIIDTVPA  254 (357)
Q Consensus       247 ~v~d~~g~  254 (357)
                      ++|+++|.
T Consensus       108 ~lvnnAg~  115 (276)
T 2b4q_A          108 ILVNNAGT  115 (276)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999984

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=97.07  E-value=0.0019  Score=56.55  Aligned_cols=76  Identities=20%  Similarity=0.184  Sum_probs=55.2

Q ss_pred             CCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc----CCcE---EEcCCChhHHHHhh-------C
Q 018382          179 QSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL----GADQ---YLVSSDATRMQEAA-------D  243 (357)
Q Consensus       179 ~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~----g~~~---vv~~~~~~~~~~~~-------~  243 (357)
                      -.++++||+|+ +++|.++++.+...|++|++++++.++.+...+++    |...   ..|..+.+.++++.       +
T Consensus        25 l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g  104 (277)
T 4fc7_A           25 LRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEFG  104 (277)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            35789999987 99999999999999999999999987655443322    4322   23566654433322       3


Q ss_pred             CccEEEEcCCC
Q 018382          244 SLDYIIDTVPA  254 (357)
Q Consensus       244 ~~d~v~d~~g~  254 (357)
                      ++|++++++|.
T Consensus       105 ~id~lv~nAg~  115 (277)
T 4fc7_A          105 RIDILINCAAG  115 (277)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCcC
Confidence            79999999984

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=97.06  E-value=0.0023  Score=54.83  Aligned_cols=76  Identities=16%  Similarity=0.240  Sum_probs=54.6

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh----cCCcE---EEcCCChhHHHHhh-------CC
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH----LGADQ---YLVSSDATRMQEAA-------DS  244 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~----~g~~~---vv~~~~~~~~~~~~-------~~  244 (357)
                      .++++||+|+ |++|.++++.+...|++|++++++.++.+.+.+.    .+...   ..|..+.+.++++.       ++
T Consensus         6 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   85 (248)
T 2pnf_A            6 QGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVDG   85 (248)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHSSC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence            4678999987 9999999999988999999999988766554432    24321   23555554444332       37


Q ss_pred             ccEEEEcCCCC
Q 018382          245 LDYIIDTVPAN  255 (357)
Q Consensus       245 ~d~v~d~~g~~  255 (357)
                      +|++|+++|..
T Consensus        86 ~d~vi~~Ag~~   96 (248)
T 2pnf_A           86 IDILVNNAGIT   96 (248)
T ss_dssp             CSEEEECCCCC
T ss_pred             CCEEEECCCCC
Confidence            99999998853

>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}

Probab=97.06  E-value=0.0023  Score=57.09  Aligned_cols=89  Identities=26%  Similarity=0.332  Sum_probs=67.4

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCC--
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANH--  256 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~--  256 (357)
                      -.|++|.|+|.|.+|..+++.++..|++|++.+++.++ +.+.+ +|+.. .   +   ++++....|+|+.++....  
T Consensus       140 l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~-~~~~~-~g~~~-~---~---l~ell~~aDvV~l~~p~~~~t  210 (307)
T 1wwk_A          140 LEGKTIGIIGFGRIGYQVAKIANALGMNILLYDPYPNE-ERAKE-VNGKF-V---D---LETLLKESDVVTIHVPLVEST  210 (307)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCH-HHHHH-TTCEE-C---C---HHHHHHHCSEEEECCCCSTTT
T ss_pred             cCCceEEEEccCHHHHHHHHHHHHCCCEEEEECCCCCh-hhHhh-cCccc-c---C---HHHHHhhCCEEEEecCCChHH
Confidence            35789999999999999999999999999999988766 44545 78643 1   2   2334457899999887532  


Q ss_pred             --Ch-HHHHhccccCCeEEEEcc
Q 018382          257 --PL-EPYLSLLKLDGKLILTGV  276 (357)
Q Consensus       257 --~~-~~~~~~l~~~G~~v~~g~  276 (357)
                        .+ ...++.|+++..++.++-
T Consensus       211 ~~li~~~~l~~mk~ga~lin~ar  233 (307)
T 1wwk_A          211 YHLINEERLKLMKKTAILINTSR  233 (307)
T ss_dssp             TTCBCHHHHHHSCTTCEEEECSC
T ss_pred             hhhcCHHHHhcCCCCeEEEECCC
Confidence              23 356788999999988854

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=97.06  E-value=0.0023  Score=55.24  Aligned_cols=75  Identities=16%  Similarity=0.206  Sum_probs=53.9

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCCc-E--EEcCCChhHHHHhh-------CCc
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGAD-Q--YLVSSDATRMQEAA-------DSL  245 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~~-~--vv~~~~~~~~~~~~-------~~~  245 (357)
                      .++++||+|+ |++|.++++.+...|++|+++++++++.+.+.+.   .+.. .  ..|..+.+.++++.       +++
T Consensus        12 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   91 (260)
T 3awd_A           12 DNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGRV   91 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            5688999987 9999999999988999999999987765544332   2432 1  23555554443332       379


Q ss_pred             cEEEEcCCC
Q 018382          246 DYIIDTVPA  254 (357)
Q Consensus       246 d~v~d~~g~  254 (357)
                      |++|+++|.
T Consensus        92 d~vi~~Ag~  100 (260)
T 3awd_A           92 DILVACAGI  100 (260)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999874

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=97.06  E-value=0.0016  Score=57.07  Aligned_cols=73  Identities=21%  Similarity=0.229  Sum_probs=55.4

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcE---EEcCCChhHHHHhh------CCccEEE
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQ---YLVSSDATRMQEAA------DSLDYII  249 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~~------~~~d~v~  249 (357)
                      .++++||+|+ +++|.++++.+...|++|+++++++++.+.+.+.++...   ..|..+.+.++++.      +++|+++
T Consensus        29 ~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~id~lv  108 (281)
T 3ppi_A           29 EGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAANQLGRLRYAV  108 (281)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHTTSSEEEEEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCeEE
Confidence            5688999987 999999999998899999999999988887777676432   23555554433322      2689999


Q ss_pred             EcC
Q 018382          250 DTV  252 (357)
Q Consensus       250 d~~  252 (357)
                      .+.
T Consensus       109 ~~a  111 (281)
T 3ppi_A          109 VAH  111 (281)
T ss_dssp             ECC
T ss_pred             Ecc
Confidence            883

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=97.06  E-value=0.0013  Score=58.97  Aligned_cols=75  Identities=19%  Similarity=0.186  Sum_probs=55.0

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc---CC--c---EEEcCCChhHHHHhh-------C
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL---GA--D---QYLVSSDATRMQEAA-------D  243 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~---g~--~---~vv~~~~~~~~~~~~-------~  243 (357)
                      .+++|||+|+ |++|.++++.+...|++|++++++.++.+.+.+.+   +.  .   ...|..+.+.++++.       +
T Consensus         7 ~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   86 (319)
T 3ioy_A            7 AGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARFG   86 (319)
T ss_dssp             TTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhCC
Confidence            5789999987 99999999999889999999999988766554432   22  1   223556654433332       4


Q ss_pred             CccEEEEcCCC
Q 018382          244 SLDYIIDTVPA  254 (357)
Q Consensus       244 ~~d~v~d~~g~  254 (357)
                      ++|++|+++|.
T Consensus        87 ~id~lv~nAg~   97 (319)
T 3ioy_A           87 PVSILCNNAGV   97 (319)
T ss_dssp             CEEEEEECCCC
T ss_pred             CCCEEEECCCc
Confidence            79999999984

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=97.06  E-value=0.0011  Score=57.75  Aligned_cols=75  Identities=16%  Similarity=0.187  Sum_probs=54.9

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc-----CCc---EEEcCCChhHHHHhh---CCccE
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL-----GAD---QYLVSSDATRMQEAA---DSLDY  247 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~-----g~~---~vv~~~~~~~~~~~~---~~~d~  247 (357)
                      .++++||+|+ |++|.++++.+...|++|+++++++++.+...+++     +..   ...|..+.+.++++.   +++|+
T Consensus         9 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~   88 (267)
T 3t4x_A            9 KGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPKVDI   88 (267)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCCCSE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCCCCE
Confidence            5788999987 99999999999889999999999987765544322     221   123555555555443   37999


Q ss_pred             EEEcCCC
Q 018382          248 IIDTVPA  254 (357)
Q Consensus       248 v~d~~g~  254 (357)
                      +++++|.
T Consensus        89 lv~nAg~   95 (267)
T 3t4x_A           89 LINNLGI   95 (267)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999985

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=97.05  E-value=0.0021  Score=55.02  Aligned_cols=73  Identities=16%  Similarity=0.040  Sum_probs=55.6

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHc--CCeEEEEeCCcHHHHHHHHhcCCc-EEEcCCChhHHHHhhCCccEEEEcCCC
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAM--GHHVTVISSSDKKRVEAMEHLGAD-QYLVSSDATRMQEAADSLDYIIDTVPA  254 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~--g~~V~~~~~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~~~~~~d~v~d~~g~  254 (357)
                      .+.+|||+|+ |.+|..+++.+...  |.+|+++++++++.+.+ . .+.. ...|..+.+.+.++..++|+||++++.
T Consensus         3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~-~-~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~   79 (253)
T 1xq6_A            3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI-G-GEADVFIGDITDADSINPAFQGIDALVILTSA   79 (253)
T ss_dssp             SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT-T-CCTTEEECCTTSHHHHHHHHTTCSEEEECCCC
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc-C-CCeeEEEecCCCHHHHHHHHcCCCEEEEeccc
Confidence            4678999987 99999999999888  78999999987665432 1 2332 234666777777777789999999874

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=97.04  E-value=0.0022  Score=55.89  Aligned_cols=97  Identities=16%  Similarity=0.216  Sum_probs=72.6

Q ss_pred             ccccchhhhhhhhhhccCCCCCCCeEEEEecCh-HHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhH
Q 018382          159 APLLCAGVTVFSPLSHFGLKQSGLRGGILGLGG-VGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATR  237 (357)
Q Consensus       159 a~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~-~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~  237 (357)
                      ..+||....+...|++...--.|++++|+|.|. +|..+++++...|++|++..+...                     .
T Consensus       139 ~~~PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~---------------------~  197 (285)
T 3l07_A          139 CLESCTPKGIMTMLREYGIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTT---------------------D  197 (285)
T ss_dssp             CCCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCS---------------------S
T ss_pred             CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCch---------------------h
Confidence            456776666777777766545899999999854 899999999999999988754311                     2


Q ss_pred             HHHhhCCccEEEEcCCCCCChHHHHhccccCCeEEEEccCC
Q 018382          238 MQEAADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVIN  278 (357)
Q Consensus       238 ~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~  278 (357)
                      +++....+|+||.++|.+..+  -.+.++++-.++++|...
T Consensus       198 L~~~~~~ADIVI~Avg~p~~I--~~~~vk~GavVIDvgi~~  236 (285)
T 3l07_A          198 LKSHTTKADILIVAVGKPNFI--TADMVKEGAVVIDVGINH  236 (285)
T ss_dssp             HHHHHTTCSEEEECCCCTTCB--CGGGSCTTCEEEECCCEE
T ss_pred             HHHhcccCCEEEECCCCCCCC--CHHHcCCCcEEEEecccC
Confidence            344566899999999987443  336678888888888654

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=97.04  E-value=0.0025  Score=55.68  Aligned_cols=75  Identities=13%  Similarity=0.192  Sum_probs=54.3

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc---CCc-E--EEcCCChhHHHHhh-------CCc
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL---GAD-Q--YLVSSDATRMQEAA-------DSL  245 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~---g~~-~--vv~~~~~~~~~~~~-------~~~  245 (357)
                      .++++||+|+ |++|.++++.+...|++|+++++++++.+.+.+.+   |.. .  ..|..+.+.++++.       +++
T Consensus        30 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i  109 (272)
T 1yb1_A           30 TGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDV  109 (272)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHCCCC
Confidence            4688999987 99999999999889999999999887765544322   432 1  23555554433322       379


Q ss_pred             cEEEEcCCC
Q 018382          246 DYIIDTVPA  254 (357)
Q Consensus       246 d~v~d~~g~  254 (357)
                      |++|+++|.
T Consensus       110 D~li~~Ag~  118 (272)
T 1yb1_A          110 SILVNNAGV  118 (272)
T ss_dssp             SEEEECCCC
T ss_pred             cEEEECCCc
Confidence            999999985

>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}

Probab=97.03  E-value=0.0025  Score=54.24  Aligned_cols=102  Identities=12%  Similarity=0.156  Sum_probs=69.7

Q ss_pred             hhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC--eEEEEeCCcHHHHHHHHhcC----CcEEE-cCCChhHHHHhhC
Q 018382          171 PLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH--HVTVISSSDKKRVEAMEHLG----ADQYL-VSSDATRMQEAAD  243 (357)
Q Consensus       171 ~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~--~V~~~~~~~~~~~~~~~~~g----~~~vv-~~~~~~~~~~~~~  243 (357)
                      .|..+.. +||++||=+|+|. |..+..+++..|.  +|++++.+++..+.+++...    ...+. +..+++.......
T Consensus        69 gl~~l~i-kpG~~VldlG~G~-G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~~~~~~~~  146 (233)
T 4df3_A           69 GLIELPV-KEGDRILYLGIAS-GTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPEKYRHLVE  146 (233)
T ss_dssp             TCSCCCC-CTTCEEEEETCTT-SHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCGGGGTTTCC
T ss_pred             chhhcCC-CCCCEEEEecCcC-CHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCccccccccc
Confidence            4555555 9999999999864 7788889998875  89999999988877766433    12222 2223333333345


Q ss_pred             CccEEEEcCCCCC----ChHHHHhccccCCeEEEE
Q 018382          244 SLDYIIDTVPANH----PLEPYLSLLKLDGKLILT  274 (357)
Q Consensus       244 ~~d~v~d~~g~~~----~~~~~~~~l~~~G~~v~~  274 (357)
                      .+|+||.......    .+..+.+.|+|+|+++..
T Consensus       147 ~vDvVf~d~~~~~~~~~~l~~~~r~LKpGG~lvI~  181 (233)
T 4df3_A          147 GVDGLYADVAQPEQAAIVVRNARFFLRDGGYMLMA  181 (233)
T ss_dssp             CEEEEEECCCCTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             eEEEEEEeccCChhHHHHHHHHHHhccCCCEEEEE
Confidence            7999886554432    345667889999998764

>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}

Probab=97.03  E-value=0.003  Score=53.38  Aligned_cols=99  Identities=20%  Similarity=0.155  Sum_probs=69.1

Q ss_pred             CCCCCCeEEEEecChHHHHHHHHHHHcC------CeEEEEeCCcHHHHHHHHhc---C-------CcEEEcCCChhHHH-
Q 018382          177 LKQSGLRGGILGLGGVGHMGVLIAKAMG------HHVTVISSSDKKRVEAMEHL---G-------ADQYLVSSDATRMQ-  239 (357)
Q Consensus       177 ~~~~~~~VlI~G~g~~G~~ai~la~~~g------~~V~~~~~~~~~~~~~~~~~---g-------~~~vv~~~~~~~~~-  239 (357)
                      .++++++||-+|+|. |..++.+++..+      .+|+.++.+++..+.+++.+   +       .-.++..+..+... 
T Consensus        77 ~~~~~~~VLdiG~G~-G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~  155 (227)
T 2pbf_A           77 VLKPGSRAIDVGSGS-GYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEE  155 (227)
T ss_dssp             TSCTTCEEEEESCTT-SHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHH
T ss_pred             hCCCCCEEEEECCCC-CHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccc
Confidence            347899999999875 888888888876      59999999988777666532   2       12222222111110 


Q ss_pred             --HhhCCccEEEEcCCCCCChHHHHhccccCCeEEEEcc
Q 018382          240 --EAADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGV  276 (357)
Q Consensus       240 --~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~  276 (357)
                        ...+.||+|+...........+.+.|+++|+++..-.
T Consensus       156 ~~~~~~~fD~I~~~~~~~~~~~~~~~~LkpgG~lv~~~~  194 (227)
T 2pbf_A          156 EKKELGLFDAIHVGASASELPEILVDLLAENGKLIIPIE  194 (227)
T ss_dssp             HHHHHCCEEEEEECSBBSSCCHHHHHHEEEEEEEEEEEE
T ss_pred             cCccCCCcCEEEECCchHHHHHHHHHhcCCCcEEEEEEc
Confidence              1235799998877666577889999999999887644

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=97.02  E-value=0.0019  Score=56.45  Aligned_cols=75  Identities=13%  Similarity=0.223  Sum_probs=54.8

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc---CCcEE---EcCCChhHHHHhh-------CCc
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL---GADQY---LVSSDATRMQEAA-------DSL  245 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~---g~~~v---v~~~~~~~~~~~~-------~~~  245 (357)
                      .++++||+|+ |++|.++++.+...|++|+++++++++.+.+.+++   |....   .|..+.+.++++.       +++
T Consensus        25 ~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  104 (271)
T 4ibo_A           25 GGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQGIDV  104 (271)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHCCCC
Confidence            5789999987 99999999999999999999999988766554433   43322   3555554433332       379


Q ss_pred             cEEEEcCCC
Q 018382          246 DYIIDTVPA  254 (357)
Q Consensus       246 d~v~d~~g~  254 (357)
                      |++++++|.
T Consensus       105 D~lv~nAg~  113 (271)
T 4ibo_A          105 DILVNNAGI  113 (271)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999985

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=97.02  E-value=0.0017  Score=56.03  Aligned_cols=93  Identities=16%  Similarity=0.132  Sum_probs=62.5

Q ss_pred             CCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHH----hh---CCccEEEE
Q 018382          179 QSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQE----AA---DSLDYIID  250 (357)
Q Consensus       179 ~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~----~~---~~~d~v~d  250 (357)
                      +-++++||+|+ |++|.++++.+...|++|+++++++++..      .....++..+.+.+++    +.   +++|++++
T Consensus        20 ~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~------~~~~~~d~~d~~~v~~~~~~~~~~~g~iD~li~   93 (251)
T 3orf_A           20 HMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNA------DHSFTIKDSGEEEIKSVIEKINSKSIKVDTFVC   93 (251)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTS------SEEEECSCSSHHHHHHHHHHHHTTTCCEEEEEE
T ss_pred             ccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc------ccceEEEeCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            34688999987 99999999999999999999998866432      1122344555443333    22   37899999


Q ss_pred             cCCCC-------C-------------------ChHHHHhccccCCeEEEEccC
Q 018382          251 TVPAN-------H-------------------PLEPYLSLLKLDGKLILTGVI  277 (357)
Q Consensus       251 ~~g~~-------~-------------------~~~~~~~~l~~~G~~v~~g~~  277 (357)
                      ++|..       .                   ..+.+...++++|+++.++..
T Consensus        94 ~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~  146 (251)
T 3orf_A           94 AAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGAS  146 (251)
T ss_dssp             CCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCG
T ss_pred             CCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEech
Confidence            99841       0                   122344456677899988654

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=97.02  E-value=0.0023  Score=55.90  Aligned_cols=75  Identities=16%  Similarity=0.097  Sum_probs=53.4

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeC-CcHHHHHHHHhc----CCcE---EEcCCCh----hHHHHhh----
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISS-SDKKRVEAMEHL----GADQ---YLVSSDA----TRMQEAA----  242 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~-~~~~~~~~~~~~----g~~~---vv~~~~~----~~~~~~~----  242 (357)
                      .++++||+|+ |++|.++++.+...|++|+++++ ++++.+.+.+.+    |...   ..|..+.    +.++++.    
T Consensus        10 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   89 (276)
T 1mxh_A           10 ECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSF   89 (276)
T ss_dssp             -CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHHHH
Confidence            4678999987 99999999999889999999999 777665544433    5321   2355555    4443332    


Q ss_pred             ---CCccEEEEcCCC
Q 018382          243 ---DSLDYIIDTVPA  254 (357)
Q Consensus       243 ---~~~d~v~d~~g~  254 (357)
                         +++|++|+++|.
T Consensus        90 ~~~g~id~lv~nAg~  104 (276)
T 1mxh_A           90 RAFGRCDVLVNNASA  104 (276)
T ss_dssp             HHHSCCCEEEECCCC
T ss_pred             HhcCCCCEEEECCCC
Confidence               379999999984

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=97.01  E-value=0.0016  Score=57.11  Aligned_cols=75  Identities=17%  Similarity=0.142  Sum_probs=54.6

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc---CC---cE---EEcCCChhHHHHh-------h
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL---GA---DQ---YLVSSDATRMQEA-------A  242 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~---g~---~~---vv~~~~~~~~~~~-------~  242 (357)
                      .++++||+|+ |++|.++++.+...|++|+++++++++.+.+.+.+   +.   ..   ..|..+.+.++++       .
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   89 (281)
T 3svt_A           10 QDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAWH   89 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            5789999987 99999999999889999999999988766554433   32   11   2355555443332       2


Q ss_pred             CCccEEEEcCCC
Q 018382          243 DSLDYIIDTVPA  254 (357)
Q Consensus       243 ~~~d~v~d~~g~  254 (357)
                      +++|++++++|.
T Consensus        90 g~id~lv~nAg~  101 (281)
T 3svt_A           90 GRLHGVVHCAGG  101 (281)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence            379999999985

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=97.01  E-value=0.0037  Score=54.85  Aligned_cols=98  Identities=18%  Similarity=0.205  Sum_probs=72.0

Q ss_pred             ccccchhhhhhhhhhccCCCCCCCeEEEEecC-hHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhH
Q 018382          159 APLLCAGVTVFSPLSHFGLKQSGLRGGILGLG-GVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATR  237 (357)
Q Consensus       159 a~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g-~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~  237 (357)
                      ..+||....+...|++...--.|++++|+|.| .+|..++.++...|++|++..+.....+                   
T Consensus       143 ~~~PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~~l~-------------------  203 (300)
T 4a26_A          143 PFTPCTAKGVIVLLKRCGIEMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTSTED-------------------  203 (300)
T ss_dssp             SCCCHHHHHHHHHHHHHTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSCHHH-------------------
T ss_pred             CCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCCCch-------------------
Confidence            35677666677777776654689999999985 5899999999999999998876322111                   


Q ss_pred             HHHhhCCccEEEEcCCCCCChHHHHhccccCCeEEEEccC
Q 018382          238 MQEAADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVI  277 (357)
Q Consensus       238 ~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~  277 (357)
                      +++....+|+||.++|.+..+.  .+.++++-.+++++..
T Consensus       204 l~~~~~~ADIVI~Avg~p~~I~--~~~vk~GavVIDvgi~  241 (300)
T 4a26_A          204 MIDYLRTADIVIAAMGQPGYVK--GEWIKEGAAVVDVGTT  241 (300)
T ss_dssp             HHHHHHTCSEEEECSCCTTCBC--GGGSCTTCEEEECCCE
T ss_pred             hhhhhccCCEEEECCCCCCCCc--HHhcCCCcEEEEEecc
Confidence            1144557899999999874443  3567888888988764

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=97.01  E-value=0.0029  Score=55.07  Aligned_cols=97  Identities=16%  Similarity=0.151  Sum_probs=72.8

Q ss_pred             ccccchhhhhhhhhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhH
Q 018382          159 APLLCAGVTVFSPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATR  237 (357)
Q Consensus       159 a~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~  237 (357)
                      ..+||....++..|++.+.--.|++++|+|. +.+|..++.++...|++|++..+...                     .
T Consensus       139 ~~~PcTp~gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T~---------------------~  197 (286)
T 4a5o_A          139 LLRPCTPKGIMTLLASTGADLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFTR---------------------D  197 (286)
T ss_dssp             SSCCHHHHHHHHHHHHTTCCCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTCS---------------------C
T ss_pred             CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCCc---------------------C
Confidence            4567776667777777765468999999997 55999999999999999998764321                     1


Q ss_pred             HHHhhCCccEEEEcCCCCCChHHHHhccccCCeEEEEccCC
Q 018382          238 MQEAADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVIN  278 (357)
Q Consensus       238 ~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~  278 (357)
                      +++....+|+||.++|.+..+  -.+.++++-.++++|...
T Consensus       198 L~~~~~~ADIVI~Avg~p~~I--~~~~vk~GavVIDvgi~~  236 (286)
T 4a5o_A          198 LADHVSRADLVVVAAGKPGLV--KGEWIKEGAIVIDVGINR  236 (286)
T ss_dssp             HHHHHHTCSEEEECCCCTTCB--CGGGSCTTCEEEECCSCS
T ss_pred             HHHHhccCCEEEECCCCCCCC--CHHHcCCCeEEEEecccc
Confidence            234445789999999987444  336678998999998653

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=97.01  E-value=0.0022  Score=55.23  Aligned_cols=76  Identities=16%  Similarity=0.239  Sum_probs=54.6

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCCcE---EEcCCChhHHHHhh-------CCc
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGADQ---YLVSSDATRMQEAA-------DSL  245 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~~~---vv~~~~~~~~~~~~-------~~~  245 (357)
                      .++++||+|+ |++|.++++.+...|++|+++++++++.+.+.+.   .+...   ..|..+++.++++.       +++
T Consensus        10 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   89 (255)
T 1fmc_A           10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKV   89 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence            5688999987 9999999999988899999999988766544332   24321   23555555444332       389


Q ss_pred             cEEEEcCCCC
Q 018382          246 DYIIDTVPAN  255 (357)
Q Consensus       246 d~v~d~~g~~  255 (357)
                      |++|+++|..
T Consensus        90 d~vi~~Ag~~   99 (255)
T 1fmc_A           90 DILVNNAGGG   99 (255)
T ss_dssp             CEEEECCCCC
T ss_pred             CEEEECCCCC
Confidence            9999998753

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=97.00  E-value=0.0016  Score=56.04  Aligned_cols=73  Identities=16%  Similarity=0.213  Sum_probs=54.9

Q ss_pred             CeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcE---EEcCCChhHHHHhh-------CCccEEEE
Q 018382          182 LRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQ---YLVSSDATRMQEAA-------DSLDYIID  250 (357)
Q Consensus       182 ~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~~-------~~~d~v~d  250 (357)
                      +++||+|+ |++|.++++.+...|++|+++++++++.+.+.+.++...   ..|..+++.++++.       +++|++++
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvn   80 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVN   80 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEE
Confidence            36888887 999999999998899999999999888777666565321   24666655544432       27999999


Q ss_pred             cCCC
Q 018382          251 TVPA  254 (357)
Q Consensus       251 ~~g~  254 (357)
                      ++|.
T Consensus        81 nAg~   84 (248)
T 3asu_A           81 NAGL   84 (248)
T ss_dssp             CCCC
T ss_pred             CCCc
Confidence            9884

>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*

Probab=96.99  E-value=0.0015  Score=55.78  Aligned_cols=96  Identities=25%  Similarity=0.266  Sum_probs=67.5

Q ss_pred             CCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCCcEE-EcCCChhHHHHh--hCCccEEEEc
Q 018382          178 KQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGADQY-LVSSDATRMQEA--ADSLDYIIDT  251 (357)
Q Consensus       178 ~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~~~v-v~~~~~~~~~~~--~~~~d~v~d~  251 (357)
                      ++++++||.+|+| .|..++.+++..+.+|++++.+++..+.+++.   .|...+ +...+.  ....  ..++|+|+.+
T Consensus        89 ~~~~~~vLdiG~G-~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~--~~~~~~~~~fD~Ii~~  165 (235)
T 1jg1_A           89 LKPGMNILEVGTG-SGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDG--SKGFPPKAPYDVIIVT  165 (235)
T ss_dssp             CCTTCCEEEECCT-TSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCG--GGCCGGGCCEEEEEEC
T ss_pred             CCCCCEEEEEeCC-cCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCc--ccCCCCCCCccEEEEC
Confidence            4789999999998 68888899988778999999998877666653   343221 111121  1111  1259999987


Q ss_pred             CCCCCChHHHHhccccCCeEEEEcc
Q 018382          252 VPANHPLEPYLSLLKLDGKLILTGV  276 (357)
Q Consensus       252 ~g~~~~~~~~~~~l~~~G~~v~~g~  276 (357)
                      ..-......+.+.|+++|+++..-.
T Consensus       166 ~~~~~~~~~~~~~L~pgG~lvi~~~  190 (235)
T 1jg1_A          166 AGAPKIPEPLIEQLKIGGKLIIPVG  190 (235)
T ss_dssp             SBBSSCCHHHHHTEEEEEEEEEEEC
T ss_pred             CcHHHHHHHHHHhcCCCcEEEEEEe
Confidence            6665466788999999999876543

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=96.99  E-value=0.003  Score=54.79  Aligned_cols=75  Identities=17%  Similarity=0.165  Sum_probs=54.0

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc---CCcE---EEcCCChhHHHHhh--------CC
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL---GADQ---YLVSSDATRMQEAA--------DS  244 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~---g~~~---vv~~~~~~~~~~~~--------~~  244 (357)
                      .++++||+|+ |++|.++++.+...|++|+++.+++++.+.+.+.+   +...   ..|..+.+.++++.        ++
T Consensus        13 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   92 (266)
T 1xq1_A           13 KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGK   92 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            4678999987 99999999999889999999999887665543322   4321   23555554433332        57


Q ss_pred             ccEEEEcCCC
Q 018382          245 LDYIIDTVPA  254 (357)
Q Consensus       245 ~d~v~d~~g~  254 (357)
                      +|++|+++|.
T Consensus        93 id~li~~Ag~  102 (266)
T 1xq1_A           93 LDILINNLGA  102 (266)
T ss_dssp             CSEEEEECCC
T ss_pred             CcEEEECCCC
Confidence            9999999885

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.98  E-value=0.0018  Score=57.39  Aligned_cols=75  Identities=20%  Similarity=0.340  Sum_probs=54.2

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc---CC---c-E--EEcCCChhHHHHhh-------
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL---GA---D-Q--YLVSSDATRMQEAA-------  242 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~---g~---~-~--vv~~~~~~~~~~~~-------  242 (357)
                      .++++||+|+ |++|.++++.+...|++|+++++++++.+.+.+.+   |.   . .  ..|..+++.++++.       
T Consensus        25 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  104 (297)
T 1xhl_A           25 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKF  104 (297)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHhc
Confidence            4678999987 99999999999889999999999987765544322   32   2 1  23556654443332       


Q ss_pred             CCccEEEEcCCC
Q 018382          243 DSLDYIIDTVPA  254 (357)
Q Consensus       243 ~~~d~v~d~~g~  254 (357)
                      +++|++|+++|.
T Consensus       105 g~iD~lvnnAG~  116 (297)
T 1xhl_A          105 GKIDILVNNAGA  116 (297)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence            379999999884

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=96.98  E-value=0.0019  Score=55.70  Aligned_cols=75  Identities=19%  Similarity=0.222  Sum_probs=53.2

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCC-cHHHHHHHHhc---CCc---EEEcCCChhHHHHhh-------CC
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSS-DKKRVEAMEHL---GAD---QYLVSSDATRMQEAA-------DS  244 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~-~~~~~~~~~~~---g~~---~vv~~~~~~~~~~~~-------~~  244 (357)
                      .++++||+|+ |++|.++++.+...|++|++++++ .++.+.+.+.+   +..   ...|..+.+.++++.       ++
T Consensus         6 ~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   85 (258)
T 3afn_B            6 KGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKFGG   85 (258)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            4678999987 999999999998899999999998 66554443322   422   123555655444332       37


Q ss_pred             ccEEEEcCCC
Q 018382          245 LDYIIDTVPA  254 (357)
Q Consensus       245 ~d~v~d~~g~  254 (357)
                      +|++|+++|.
T Consensus        86 id~vi~~Ag~   95 (258)
T 3afn_B           86 IDVLINNAGG   95 (258)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999985

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.97  E-value=0.0019  Score=56.64  Aligned_cols=75  Identities=17%  Similarity=0.252  Sum_probs=54.3

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc---CC---c-E--EEcCCChhHHHHh-------h
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL---GA---D-Q--YLVSSDATRMQEA-------A  242 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~---g~---~-~--vv~~~~~~~~~~~-------~  242 (357)
                      .++++||+|+ |++|.++++.+...|++|+++++++++.+.+.+.+   +.   . .  ..|..+.+.++++       .
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   84 (280)
T 1xkq_A            5 SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQF   84 (280)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHhc
Confidence            4678999987 99999999999889999999999987766554423   22   2 1  2366665443332       2


Q ss_pred             CCccEEEEcCCC
Q 018382          243 DSLDYIIDTVPA  254 (357)
Q Consensus       243 ~~~d~v~d~~g~  254 (357)
                      +++|++|+++|.
T Consensus        85 g~iD~lv~nAg~   96 (280)
T 1xkq_A           85 GKIDVLVNNAGA   96 (280)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            379999999875

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=96.97  E-value=0.0024  Score=54.76  Aligned_cols=76  Identities=16%  Similarity=0.132  Sum_probs=54.8

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCCcE---EEcCCChhHHHHhh-------CCc
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGADQ---YLVSSDATRMQEAA-------DSL  245 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~~~---vv~~~~~~~~~~~~-------~~~  245 (357)
                      .++++||+|+ |++|.++++.+...|++|+++++++++.+.+.+.   .+...   ..|..+.+.+++..       +++
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   83 (247)
T 3lyl_A            4 NEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENLAI   83 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTCCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            4678999987 9999999999988999999999998776655442   24322   23555554433321       369


Q ss_pred             cEEEEcCCCC
Q 018382          246 DYIIDTVPAN  255 (357)
Q Consensus       246 d~v~d~~g~~  255 (357)
                      |++++++|..
T Consensus        84 d~li~~Ag~~   93 (247)
T 3lyl_A           84 DILVNNAGIT   93 (247)
T ss_dssp             SEEEECCCCC
T ss_pred             CEEEECCCCC
Confidence            9999998853

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=96.97  E-value=0.0022  Score=57.66  Aligned_cols=77  Identities=13%  Similarity=-0.041  Sum_probs=56.3

Q ss_pred             CCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc----C--CcEE--EcCCChhHHHHhhCCccEEE
Q 018382          179 QSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL----G--ADQY--LVSSDATRMQEAADSLDYII  249 (357)
Q Consensus       179 ~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~----g--~~~v--v~~~~~~~~~~~~~~~d~v~  249 (357)
                      -++.+|||+|+ |.+|..+++.+...|.+|++++++.++.+.+.+.+    +  ...+  .|..+.+.+.++..++|+||
T Consensus         9 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi   88 (342)
T 1y1p_A            9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGVA   88 (342)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEEE
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCCCEEE
Confidence            45789999987 99999999988888999999999877655444322    2  2222  35555555555556899999


Q ss_pred             EcCCCC
Q 018382          250 DTVPAN  255 (357)
Q Consensus       250 d~~g~~  255 (357)
                      .+++..
T Consensus        89 h~A~~~   94 (342)
T 1y1p_A           89 HIASVV   94 (342)
T ss_dssp             ECCCCC
T ss_pred             EeCCCC
Confidence            998754

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=96.97  E-value=0.0023  Score=55.71  Aligned_cols=95  Identities=20%  Similarity=0.205  Sum_probs=71.6

Q ss_pred             cccchhhhhhhhhhccCCCCCCCeEEEEecC-hHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHH
Q 018382          160 PLLCAGVTVFSPLSHFGLKQSGLRGGILGLG-GVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRM  238 (357)
Q Consensus       160 ~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g-~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~  238 (357)
                      .+||....+...|++...--.|++++|+|.| .+|..++.++...|++|++..+...                     .+
T Consensus       139 ~~PcTp~gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t~---------------------~L  197 (285)
T 3p2o_A          139 FLPCTPLGVMKLLKAYEIDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTK---------------------DL  197 (285)
T ss_dssp             CCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCS---------------------CH
T ss_pred             CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCch---------------------hH
Confidence            4666666666677776654689999999985 5899999999999999988765321                     23


Q ss_pred             HHhhCCccEEEEcCCCCCChHHHHhccccCCeEEEEccC
Q 018382          239 QEAADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVI  277 (357)
Q Consensus       239 ~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~  277 (357)
                      ++....+|+||.++|.+..+  -.+.++++-.++++|..
T Consensus       198 ~~~~~~ADIVI~Avg~p~~I--~~~~vk~GavVIDVgi~  234 (285)
T 3p2o_A          198 SLYTRQADLIIVAAGCVNLL--RSDMVKEGVIVVDVGIN  234 (285)
T ss_dssp             HHHHTTCSEEEECSSCTTCB--CGGGSCTTEEEEECCCE
T ss_pred             HHHhhcCCEEEECCCCCCcC--CHHHcCCCeEEEEeccC
Confidence            44566899999999987443  34667888888888865

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=96.96  E-value=0.0036  Score=54.15  Aligned_cols=74  Identities=15%  Similarity=0.185  Sum_probs=52.4

Q ss_pred             CCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHH--HHHHHHhc---CCcE---EEcCCChhHHHHhh-------CC
Q 018382          181 GLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKK--RVEAMEHL---GADQ---YLVSSDATRMQEAA-------DS  244 (357)
Q Consensus       181 ~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~--~~~~~~~~---g~~~---vv~~~~~~~~~~~~-------~~  244 (357)
                      ++++||+|+ |++|.++++.+...|++|++++++.++  .+.+.+.+   +...   ..|..+.+.++++.       ++
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   81 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGG   81 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            578999987 999999999888889999999988776  44443322   4221   23556654433322       37


Q ss_pred             ccEEEEcCCC
Q 018382          245 LDYIIDTVPA  254 (357)
Q Consensus       245 ~d~v~d~~g~  254 (357)
                      +|++|+++|.
T Consensus        82 iD~lv~nAg~   91 (258)
T 3a28_C           82 FDVLVNNAGI   91 (258)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999885

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=96.96  E-value=0.0015  Score=56.21  Aligned_cols=75  Identities=13%  Similarity=0.166  Sum_probs=54.3

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcH--HHHHHHHhcCCcE---EEcCCChhHHHHhh--CCccEEEEc
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDK--KRVEAMEHLGADQ---YLVSSDATRMQEAA--DSLDYIIDT  251 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~--~~~~~~~~~g~~~---vv~~~~~~~~~~~~--~~~d~v~d~  251 (357)
                      .|+++||+|+ +++|.+.++.+...|++|+++.+++.  ..+.+.+ .|.+.   ..|..+++.+++..  +++|+++++
T Consensus         8 ~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~-~g~~~~~~~~Dv~d~~~v~~~~~~g~iDiLVNN   86 (247)
T 4hp8_A            8 EGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIAK-DGGNASALLIDFADPLAAKDSFTDAGFDILVNN   86 (247)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHH-TTCCEEEEECCTTSTTTTTTSSTTTCCCEEEEC
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHH-hCCcEEEEEccCCCHHHHHHHHHhCCCCEEEEC
Confidence            5889999986 99999999999999999999998753  3344444 66432   23555554444333  379999999


Q ss_pred             CCCC
Q 018382          252 VPAN  255 (357)
Q Consensus       252 ~g~~  255 (357)
                      +|..
T Consensus        87 AGi~   90 (247)
T 4hp8_A           87 AGII   90 (247)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            8863

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=96.96  E-value=0.0015  Score=56.21  Aligned_cols=74  Identities=16%  Similarity=0.190  Sum_probs=55.1

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCC-c-EEEcCCChhHHHHhh---CCccEEEEcCC
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGA-D-QYLVSSDATRMQEAA---DSLDYIIDTVP  253 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~-~-~vv~~~~~~~~~~~~---~~~d~v~d~~g  253 (357)
                      .++++||+|+ |++|.++++.+...|++|+++++++++.+.+. +++. . ...|..+++.++++.   +++|++++++|
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~id~lv~~Ag   83 (246)
T 2ag5_A            5 DGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-KYPGIQTRVLDVTKKKQIDQFANEVERLDVLFNVAG   83 (246)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-GSTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hccCceEEEeeCCCHHHHHHHHHHhCCCCEEEECCc
Confidence            4688999987 99999999999989999999999877765544 2431 1 224666665555442   47999999988


Q ss_pred             C
Q 018382          254 A  254 (357)
Q Consensus       254 ~  254 (357)
                      .
T Consensus        84 ~   84 (246)
T 2ag5_A           84 F   84 (246)
T ss_dssp             C
T ss_pred             c
Confidence            5

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=96.95  E-value=0.0018  Score=54.45  Aligned_cols=91  Identities=21%  Similarity=0.228  Sum_probs=62.5

Q ss_pred             eEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEE-EcCCChhHHHHhhCCccEEEEcCCCC-----
Q 018382          183 RGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQY-LVSSDATRMQEAADSLDYIIDTVPAN-----  255 (357)
Q Consensus       183 ~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~v-v~~~~~~~~~~~~~~~d~v~d~~g~~-----  255 (357)
                      +|||+|+ |.+|..+++.+...|.+|+++++++++...+.. .+...+ .|..+.+.  +...++|+||+++|..     
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-~~~~~~~~D~~d~~~--~~~~~~d~vi~~ag~~~~~~~   78 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRLG-ATVATLVKEPLVLTE--ADLDSVDAVVDALSVPWGSGR   78 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHTC-TTSEEEECCGGGCCH--HHHTTCSEEEECCCCCTTSSC
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccccC-CCceEEecccccccH--hhcccCCEEEECCccCCCcch
Confidence            5899987 999999999999889999999999877654432 343322 34444433  4556899999999873     


Q ss_pred             -----CChHHHHhcccc-CCeEEEEcc
Q 018382          256 -----HPLEPYLSLLKL-DGKLILTGV  276 (357)
Q Consensus       256 -----~~~~~~~~~l~~-~G~~v~~g~  276 (357)
                           .....+++.++. +++++.++.
T Consensus        79 ~~~n~~~~~~l~~a~~~~~~~~v~~SS  105 (224)
T 3h2s_A           79 GYLHLDFATHLVSLLRNSDTLAVFILG  105 (224)
T ss_dssp             THHHHHHHHHHHHTCTTCCCEEEEECC
T ss_pred             hhHHHHHHHHHHHHHHHcCCcEEEEec
Confidence                 012334444443 468888753

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=96.94  E-value=0.0024  Score=54.78  Aligned_cols=75  Identities=17%  Similarity=0.109  Sum_probs=54.5

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcC---CcE--EEcCCChhHHHHhh-------CCcc
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLG---ADQ--YLVSSDATRMQEAA-------DSLD  246 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g---~~~--vv~~~~~~~~~~~~-------~~~d  246 (357)
                      +++++||+|+ |++|.++++.+...|++|+++++++++.+.+.+.+.   .-.  ..|..+.+.++++.       +++|
T Consensus         5 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   84 (251)
T 1zk4_A            5 DGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVS   84 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSCC
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence            4678999987 999999999998899999999999877666554443   112  23555554433322       3699


Q ss_pred             EEEEcCCC
Q 018382          247 YIIDTVPA  254 (357)
Q Consensus       247 ~v~d~~g~  254 (357)
                      ++|+++|.
T Consensus        85 ~li~~Ag~   92 (251)
T 1zk4_A           85 TLVNNAGI   92 (251)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999875

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=96.93  E-value=0.0012  Score=55.76  Aligned_cols=84  Identities=21%  Similarity=0.128  Sum_probs=59.8

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhh---CCccEEEEcCCCC
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAA---DSLDYIIDTVPAN  255 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~---~~~d~v~d~~g~~  255 (357)
                      .++++||+|+ +++|.+.++.+...|++|++++++++              .|..+++.++++.   +++|++++++|..
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~--------------~D~~~~~~v~~~~~~~g~id~lv~nAg~~   70 (223)
T 3uce_A            5 DKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG--------------LDISDEKSVYHYFETIGAFDHLIVTAGSY   70 (223)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT--------------CCTTCHHHHHHHHHHHCSEEEEEECCCCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc--------------cCCCCHHHHHHHHHHhCCCCEEEECCCCC
Confidence            4678999987 99999999998888999999987643              3455544444332   4789999988743


Q ss_pred             C--------------------------ChHHHHhccccCCeEEEEccC
Q 018382          256 H--------------------------PLEPYLSLLKLDGKLILTGVI  277 (357)
Q Consensus       256 ~--------------------------~~~~~~~~l~~~G~~v~~g~~  277 (357)
                      .                          ..+.+...++++|+++.++..
T Consensus        71 ~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~  118 (223)
T 3uce_A           71 APAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGM  118 (223)
T ss_dssp             CCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCG
T ss_pred             CCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecch
Confidence            0                          122344556678899988753

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=96.92  E-value=0.0043  Score=54.52  Aligned_cols=76  Identities=16%  Similarity=0.199  Sum_probs=54.2

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc---CCcE---EEcCCChhHHHHhh-------CCc
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL---GADQ---YLVSSDATRMQEAA-------DSL  245 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~---g~~~---vv~~~~~~~~~~~~-------~~~  245 (357)
                      .++++||+|+ |++|.++++.+...|++|+++.+++++.+.+.+.+   +...   ..|..+.+.++++.       +++
T Consensus        43 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~i  122 (285)
T 2c07_A           43 ENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNV  122 (285)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            4678999987 99999999998888999999888877665544323   4322   23556655444332       479


Q ss_pred             cEEEEcCCCC
Q 018382          246 DYIIDTVPAN  255 (357)
Q Consensus       246 d~v~d~~g~~  255 (357)
                      |++|+++|..
T Consensus       123 d~li~~Ag~~  132 (285)
T 2c07_A          123 DILVNNAGIT  132 (285)
T ss_dssp             CEEEECCCCC
T ss_pred             CEEEECCCCC
Confidence            9999998753

>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*

Probab=96.92  E-value=0.0035  Score=54.97  Aligned_cols=97  Identities=14%  Similarity=0.108  Sum_probs=72.8

Q ss_pred             ccccchhhhhhhhhhccCCCCCCCeEEEEecC-hHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhH
Q 018382          159 APLLCAGVTVFSPLSHFGLKQSGLRGGILGLG-GVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATR  237 (357)
Q Consensus       159 a~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g-~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~  237 (357)
                      ..+||........|.+...--.|.+|+|+|.| .+|.-+++++...|++|++..+..                     ..
T Consensus       143 ~~~PcTp~gi~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t---------------------~~  201 (301)
T 1a4i_A          143 CFIPCTPKGCLELIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKT---------------------AH  201 (301)
T ss_dssp             CCCCHHHHHHHHHHHTTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC---------------------SS
T ss_pred             CccCchHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECCc---------------------cc
Confidence            45677666666667666654589999999997 689999999999999999875331                     12


Q ss_pred             HHHhhCCccEEEEcCCCCCChHHHHhccccCCeEEEEccCC
Q 018382          238 MQEAADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVIN  278 (357)
Q Consensus       238 ~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~  278 (357)
                      +++....+|+||.++|.+..+  -.+.++++..++++|...
T Consensus       202 L~~~~~~ADIVI~Avg~p~~I--~~~~vk~GavVIDVgi~~  240 (301)
T 1a4i_A          202 LDEEVNKGDILVVATGQPEMV--KGEWIKPGAIVIDCGINY  240 (301)
T ss_dssp             HHHHHTTCSEEEECCCCTTCB--CGGGSCTTCEEEECCCBC
T ss_pred             HHHHhccCCEEEECCCCcccC--CHHHcCCCcEEEEccCCC
Confidence            345556899999999997443  335578999999998753

>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0

Probab=96.92  E-value=0.003  Score=52.46  Aligned_cols=97  Identities=13%  Similarity=0.104  Sum_probs=65.7

Q ss_pred             CCCCCeEEEEecChHHHHHHHHHHHcC-CeEEEEeCCcHHHHHHHHhc---CCc--EEEcCCChhHHHHhhCCccEEEEc
Q 018382          178 KQSGLRGGILGLGGVGHMGVLIAKAMG-HHVTVISSSDKKRVEAMEHL---GAD--QYLVSSDATRMQEAADSLDYIIDT  251 (357)
Q Consensus       178 ~~~~~~VlI~G~g~~G~~ai~la~~~g-~~V~~~~~~~~~~~~~~~~~---g~~--~vv~~~~~~~~~~~~~~~d~v~d~  251 (357)
                      ++++++||-+|+|. |..++.+++... .+|++++.+++..+.+++..   |.+  .++..+..+... ....+|+|+..
T Consensus        38 ~~~~~~vLDiG~G~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~-~~~~~D~i~~~  115 (204)
T 3e05_A           38 LQDDLVMWDIGAGS-ASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLD-DLPDPDRVFIG  115 (204)
T ss_dssp             CCTTCEEEEETCTT-CHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCT-TSCCCSEEEES
T ss_pred             CCCCCEEEEECCCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhh-cCCCCCEEEEC
Confidence            37899999999874 888888888853 69999999998877766532   432  222222111111 11469999976


Q ss_pred             CCCC---CChHHHHhccccCCeEEEEcc
Q 018382          252 VPAN---HPLEPYLSLLKLDGKLILTGV  276 (357)
Q Consensus       252 ~g~~---~~~~~~~~~l~~~G~~v~~g~  276 (357)
                      ....   ..+..+.+.|+++|+++....
T Consensus       116 ~~~~~~~~~l~~~~~~LkpgG~l~~~~~  143 (204)
T 3e05_A          116 GSGGMLEEIIDAVDRRLKSEGVIVLNAV  143 (204)
T ss_dssp             CCTTCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred             CCCcCHHHHHHHHHHhcCCCeEEEEEec
Confidence            5432   246678889999999987643

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=96.92  E-value=0.0028  Score=54.85  Aligned_cols=75  Identities=13%  Similarity=0.109  Sum_probs=53.6

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcC-----------CcE--EEcCCChhHHHHhh---
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLG-----------ADQ--YLVSSDATRMQEAA---  242 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g-----------~~~--vv~~~~~~~~~~~~---  242 (357)
                      .++++||+|+ |++|.++++.+...|++|+++++++++.+.+.+.+.           .-.  ..|..+.+.++++.   
T Consensus         6 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   85 (264)
T 2pd6_A            6 RSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQV   85 (264)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHHHH
Confidence            4678999987 999999999988899999999999887766554332           111  23555554433332   


Q ss_pred             ----CCc-cEEEEcCCC
Q 018382          243 ----DSL-DYIIDTVPA  254 (357)
Q Consensus       243 ----~~~-d~v~d~~g~  254 (357)
                          +++ |++|+++|.
T Consensus        86 ~~~~g~i~d~vi~~Ag~  102 (264)
T 2pd6_A           86 QACFSRPPSVVVSCAGI  102 (264)
T ss_dssp             HHHHSSCCSEEEECCCC
T ss_pred             HHHhCCCCeEEEECCCc
Confidence                356 999999885

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=96.92  E-value=0.0032  Score=54.53  Aligned_cols=95  Identities=15%  Similarity=0.084  Sum_probs=70.7

Q ss_pred             ccccchhhhhhhhhhccCCCCCCCeEEEEecC-hHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhH
Q 018382          159 APLLCAGVTVFSPLSHFGLKQSGLRGGILGLG-GVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATR  237 (357)
Q Consensus       159 a~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g-~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~  237 (357)
                      ..+||........|++.+  -.|++++|+|.| .+|..+++++...|++|++..+...                     .
T Consensus       130 ~~~PcTp~gv~~lL~~~~--l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~t~---------------------~  186 (276)
T 3ngx_A          130 FLVPATPRAVIDIMDYYG--YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKTK---------------------D  186 (276)
T ss_dssp             SSCCHHHHHHHHHHHHHT--CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCS---------------------C
T ss_pred             CCCCCcHHHHHHHHHHhC--cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCCcc---------------------c
Confidence            456666666677777766  589999999985 6999999999999999998765321                     1


Q ss_pred             HHHhhCCccEEEEcCCCCCChHHHHhccccCCeEEEEccCC
Q 018382          238 MQEAADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVIN  278 (357)
Q Consensus       238 ~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~  278 (357)
                      +++....+|+||.++|.+..+.  .+.++++..++++|...
T Consensus       187 L~~~~~~ADIVI~Avg~p~~I~--~~~vk~GavVIDvgi~~  225 (276)
T 3ngx_A          187 IGSMTRSSKIVVVAVGRPGFLN--REMVTPGSVVIDVGINY  225 (276)
T ss_dssp             HHHHHHHSSEEEECSSCTTCBC--GGGCCTTCEEEECCCEE
T ss_pred             HHHhhccCCEEEECCCCCcccc--HhhccCCcEEEEeccCc
Confidence            2334456899999999874443  35678888888888654

>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}

Probab=96.91  E-value=0.004  Score=56.11  Aligned_cols=89  Identities=20%  Similarity=0.215  Sum_probs=68.3

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCC--
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANH--  256 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~--  256 (357)
                      -.|++|.|+|.|.+|..+++.++..|++|++.+++..+ +.+.+ +|+.. .      .++++....|+|+.++....  
T Consensus       163 l~g~tvgIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~~~~-~g~~~-~------~l~ell~~aDvV~l~~P~t~~t  233 (335)
T 2g76_A          163 LNGKTLGILGLGRIGREVATRMQSFGMKTIGYDPIISP-EVSAS-FGVQQ-L------PLEEIWPLCDFITVHTPLLPST  233 (335)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSCH-HHHHH-TTCEE-C------CHHHHGGGCSEEEECCCCCTTT
T ss_pred             CCcCEEEEEeECHHHHHHHHHHHHCCCEEEEECCCcch-hhhhh-cCcee-C------CHHHHHhcCCEEEEecCCCHHH
Confidence            35789999999999999999999999999999987665 34444 78642 1      23455668999999876642  


Q ss_pred             --Ch-HHHHhccccCCeEEEEcc
Q 018382          257 --PL-EPYLSLLKLDGKLILTGV  276 (357)
Q Consensus       257 --~~-~~~~~~l~~~G~~v~~g~  276 (357)
                        .+ ...++.|++++.++.++-
T Consensus       234 ~~li~~~~l~~mk~gailIN~ar  256 (335)
T 2g76_A          234 TGLLNDNTFAQCKKGVRVVNCAR  256 (335)
T ss_dssp             TTSBCHHHHTTSCTTEEEEECSC
T ss_pred             HHhhCHHHHhhCCCCcEEEECCC
Confidence              23 457888999999988864

>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*

Probab=96.91  E-value=0.002  Score=54.50  Aligned_cols=97  Identities=21%  Similarity=0.205  Sum_probs=66.6

Q ss_pred             CCCCCeEEEEecChHHHHHHHHHHHcC--CeEEEEeCCcHHHHHHHHhc---C-------CcEEEcCCChhHHHHhhCCc
Q 018382          178 KQSGLRGGILGLGGVGHMGVLIAKAMG--HHVTVISSSDKKRVEAMEHL---G-------ADQYLVSSDATRMQEAADSL  245 (357)
Q Consensus       178 ~~~~~~VlI~G~g~~G~~ai~la~~~g--~~V~~~~~~~~~~~~~~~~~---g-------~~~vv~~~~~~~~~~~~~~~  245 (357)
                      ++++++||-+|+|. |..+..+++..|  .+|+.++.++...+.+++.+   |       .-.++.. +........+.+
T Consensus        75 ~~~~~~vLDiG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~-d~~~~~~~~~~f  152 (226)
T 1i1n_A           75 LHEGAKALDVGSGS-GILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVG-DGRMGYAEEAPY  152 (226)
T ss_dssp             SCTTCEEEEETCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEES-CGGGCCGGGCCE
T ss_pred             CCCCCEEEEEcCCc-CHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEEC-CcccCcccCCCc
Confidence            47899999999874 777888888766  59999999988777665432   2       1122222 211111113479


Q ss_pred             cEEEEcCCCCCChHHHHhccccCCeEEEEcc
Q 018382          246 DYIIDTVPANHPLEPYLSLLKLDGKLILTGV  276 (357)
Q Consensus       246 d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~  276 (357)
                      |+|+....-......+.+.|+++|+++..-.
T Consensus       153 D~i~~~~~~~~~~~~~~~~LkpgG~lv~~~~  183 (226)
T 1i1n_A          153 DAIHVGAAAPVVPQALIDQLKPGGRLILPVG  183 (226)
T ss_dssp             EEEEECSBBSSCCHHHHHTEEEEEEEEEEES
T ss_pred             CEEEECCchHHHHHHHHHhcCCCcEEEEEEe
Confidence            9998766655577889999999999887644

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=96.91  E-value=0.0035  Score=55.15  Aligned_cols=75  Identities=25%  Similarity=0.308  Sum_probs=53.2

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCCcE----EEcCCChhHHHHh-------hCC
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGADQ----YLVSSDATRMQEA-------ADS  244 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~~~----vv~~~~~~~~~~~-------~~~  244 (357)
                      +++++||+|+ |++|.++++.+...|++|+++++++++.+.+.+.   .|...    ..|..+.+.++++       .++
T Consensus        27 ~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~  106 (286)
T 1xu9_A           27 QGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGG  106 (286)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHTS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            4688999987 9999999999988999999999998876654432   24321    2355554443332       247


Q ss_pred             ccEEEEc-CCC
Q 018382          245 LDYIIDT-VPA  254 (357)
Q Consensus       245 ~d~v~d~-~g~  254 (357)
                      +|++|++ .|.
T Consensus       107 iD~li~naag~  117 (286)
T 1xu9_A          107 LDMLILNHITN  117 (286)
T ss_dssp             CSEEEECCCCC
T ss_pred             CCEEEECCccC
Confidence            9999998 443

>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7

Probab=96.91  E-value=0.002  Score=54.55  Aligned_cols=97  Identities=13%  Similarity=0.098  Sum_probs=66.9

Q ss_pred             CCCCCCeEEEEecChHHHHHHHHHHHcC-------CeEEEEeCCcHHHHHHHHhc---C-------CcEEEcCCChhHHH
Q 018382          177 LKQSGLRGGILGLGGVGHMGVLIAKAMG-------HHVTVISSSDKKRVEAMEHL---G-------ADQYLVSSDATRMQ  239 (357)
Q Consensus       177 ~~~~~~~VlI~G~g~~G~~ai~la~~~g-------~~V~~~~~~~~~~~~~~~~~---g-------~~~vv~~~~~~~~~  239 (357)
                      .++++++||-+|+|. |..++.+++..+       .+|+.++.+++..+.+++.+   +       .-.++..+..+...
T Consensus        81 ~~~~~~~VLdiG~G~-G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~  159 (227)
T 1r18_A           81 HLKPGARILDVGSGS-GYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYP  159 (227)
T ss_dssp             TCCTTCEEEEESCTT-SHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCCG
T ss_pred             hCCCCCEEEEECCCc-cHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCcccCCC
Confidence            347899999999875 788888888666       49999999988776665532   1       12222222111111


Q ss_pred             HhhCCccEEEEcCCCCCChHHHHhccccCCeEEEEc
Q 018382          240 EAADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTG  275 (357)
Q Consensus       240 ~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g  275 (357)
                       ..+.||+|+....-......+.+.|+++|+++..-
T Consensus       160 -~~~~fD~I~~~~~~~~~~~~~~~~LkpgG~lvi~~  194 (227)
T 1r18_A          160 -PNAPYNAIHVGAAAPDTPTELINQLASGGRLIVPV  194 (227)
T ss_dssp             -GGCSEEEEEECSCBSSCCHHHHHTEEEEEEEEEEE
T ss_pred             -cCCCccEEEECCchHHHHHHHHHHhcCCCEEEEEE
Confidence             12479999987776656788999999999988653

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=96.91  E-value=0.0026  Score=55.36  Aligned_cols=75  Identities=21%  Similarity=0.215  Sum_probs=53.0

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeC-CcHHHHHHHHh---cCCcE---EEcCCChhHHHHhh-------CC
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISS-SDKKRVEAMEH---LGADQ---YLVSSDATRMQEAA-------DS  244 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~-~~~~~~~~~~~---~g~~~---vv~~~~~~~~~~~~-------~~  244 (357)
                      +++++||+|+ |++|.++++.+...|++|+++++ +.++.+.+.+.   .+...   ..|..+.+.++++.       ++
T Consensus        20 ~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   99 (274)
T 1ja9_A           20 AGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGG   99 (274)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            4678999987 99999999999889999999998 65554433322   35332   23556655444332       37


Q ss_pred             ccEEEEcCCC
Q 018382          245 LDYIIDTVPA  254 (357)
Q Consensus       245 ~d~v~d~~g~  254 (357)
                      +|++|+++|.
T Consensus       100 ~d~vi~~Ag~  109 (274)
T 1ja9_A          100 LDFVMSNSGM  109 (274)
T ss_dssp             EEEEECCCCC
T ss_pred             CCEEEECCCC
Confidence            9999999875

>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}

Probab=96.90  E-value=0.0023  Score=54.37  Aligned_cols=95  Identities=15%  Similarity=0.226  Sum_probs=67.0

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHc-CCeEEEEeCCcHHHHHHHHhc---CC---cEEEcCCChhHHHHh--hCCccEEE
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAM-GHHVTVISSSDKKRVEAMEHL---GA---DQYLVSSDATRMQEA--ADSLDYII  249 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~-g~~V~~~~~~~~~~~~~~~~~---g~---~~vv~~~~~~~~~~~--~~~~d~v~  249 (357)
                      .++++||-+|+| .|..++.+++.. +.+|++++.+++..+.+++.+   |.   -.++..+..+.+...  .+.+|+||
T Consensus        53 ~~~~~vLdiG~G-~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~  131 (233)
T 2gpy_A           53 AAPARILEIGTA-IGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVLF  131 (233)
T ss_dssp             HCCSEEEEECCT-TSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEEE
T ss_pred             cCCCEEEEecCC-CcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccEEE
Confidence            578899999987 688888899887 579999999988877776643   43   223333223333444  45799998


Q ss_pred             EcCCCC---CChHHHHhccccCCeEEEE
Q 018382          250 DTVPAN---HPLEPYLSLLKLDGKLILT  274 (357)
Q Consensus       250 d~~g~~---~~~~~~~~~l~~~G~~v~~  274 (357)
                      ......   ..+..+.+.|+++|.++..
T Consensus       132 ~~~~~~~~~~~l~~~~~~L~pgG~lv~~  159 (233)
T 2gpy_A          132 IDAAKGQYRRFFDMYSPMVRPGGLILSD  159 (233)
T ss_dssp             EEGGGSCHHHHHHHHGGGEEEEEEEEEE
T ss_pred             ECCCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence            765532   2456788899999998875

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=96.90  E-value=0.0036  Score=54.07  Aligned_cols=75  Identities=16%  Similarity=0.150  Sum_probs=52.5

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeC-CcHHHHHHHHh---cCCcE---EEcCCChhHHHHhh-------CC
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISS-SDKKRVEAMEH---LGADQ---YLVSSDATRMQEAA-------DS  244 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~-~~~~~~~~~~~---~g~~~---vv~~~~~~~~~~~~-------~~  244 (357)
                      .++++||+|+ |++|.++++.+...|++|+++++ ++++.+.+.+.   .+...   ..|..+.+.+.++.       ++
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   85 (261)
T 1gee_A            6 EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGK   85 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            4678999987 99999999988888999999999 66655444332   24321   23555554433322       37


Q ss_pred             ccEEEEcCCC
Q 018382          245 LDYIIDTVPA  254 (357)
Q Consensus       245 ~d~v~d~~g~  254 (357)
                      +|++|+++|.
T Consensus        86 id~li~~Ag~   95 (261)
T 1gee_A           86 LDVMINNAGL   95 (261)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999875

>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5

Probab=96.90  E-value=0.0068  Score=52.91  Aligned_cols=97  Identities=11%  Similarity=0.120  Sum_probs=66.8

Q ss_pred             hhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEE
Q 018382          171 PLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYII  249 (357)
Q Consensus       171 ~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~  249 (357)
                      +|...+. ..+++++|+|+|++|.+++..+...|+ +|++..|+.++.+.+.+.++.+ . .. +.   .  ...+|+|+
T Consensus       110 ~l~~~~~-~~~~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~~~~-~-~~-~~---~--~~~~DivI  180 (271)
T 1npy_A          110 LIEKYHL-NKNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYA-Y-IN-SL---E--NQQADILV  180 (271)
T ss_dssp             HHHHTTC-CTTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCE-E-ES-CC---T--TCCCSEEE
T ss_pred             HHHHhCC-CCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCc-c-ch-hh---h--cccCCEEE
Confidence            3433333 356889999999999999999999998 8999999988887777767752 1 11 10   1  24799999


Q ss_pred             EcCCCCCCh-------HHHHhccccCCeEEEEcc
Q 018382          250 DTVPANHPL-------EPYLSLLKLDGKLILTGV  276 (357)
Q Consensus       250 d~~g~~~~~-------~~~~~~l~~~G~~v~~g~  276 (357)
                      ++++....-       ......++++..++++..
T Consensus       181 naTp~gm~~~~~~~~~~~~~~~l~~~~~v~DlvY  214 (271)
T 1npy_A          181 NVTSIGMKGGKEEMDLAFPKAFIDNASVAFDVVA  214 (271)
T ss_dssp             ECSSTTCTTSTTTTSCSSCHHHHHHCSEEEECCC
T ss_pred             ECCCCCccCccccCCCCCCHHHcCCCCEEEEeec
Confidence            998865211       111345666777777754

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=96.88  E-value=0.0024  Score=55.33  Aligned_cols=74  Identities=11%  Similarity=0.038  Sum_probs=53.2

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHH---HHHHhcCCc---EEEcCCChhHHHHh-------hCCc
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRV---EAMEHLGAD---QYLVSSDATRMQEA-------ADSL  245 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~---~~~~~~g~~---~vv~~~~~~~~~~~-------~~~~  245 (357)
                      +|+++||+|+ +++|.+.++.+...|++|++..+++++.+   .+.+ .+..   ...|..+++.++++       .+++
T Consensus         6 ~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G~i   84 (258)
T 4gkb_A            6 QDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQ-RQPRATYLPVELQDDAQCRDAVAQTIATFGRL   84 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHH-HCTTCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHh-cCCCEEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            6889999987 99999999998889999999998776433   3333 3421   23466665443332       2479


Q ss_pred             cEEEEcCCC
Q 018382          246 DYIIDTVPA  254 (357)
Q Consensus       246 d~v~d~~g~  254 (357)
                      |++++++|-
T Consensus        85 DiLVNnAGi   93 (258)
T 4gkb_A           85 DGLVNNAGV   93 (258)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999985

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=96.87  E-value=0.0039  Score=54.61  Aligned_cols=77  Identities=19%  Similarity=0.193  Sum_probs=53.9

Q ss_pred             CCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeC-------------CcHHHHHHHH---hcCCcE---EEcCCChhHH
Q 018382          179 QSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISS-------------SDKKRVEAME---HLGADQ---YLVSSDATRM  238 (357)
Q Consensus       179 ~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~-------------~~~~~~~~~~---~~g~~~---vv~~~~~~~~  238 (357)
                      -.++++||+|+ +++|.++++.+...|++|+++++             ++++.+.+.+   ..|...   ..|..+.+.+
T Consensus        13 l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v   92 (280)
T 3pgx_A           13 LQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAAL   92 (280)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHH
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHH
Confidence            36789999987 99999999999999999999987             4455444333   234322   2466665544


Q ss_pred             HHhh-------CCccEEEEcCCCC
Q 018382          239 QEAA-------DSLDYIIDTVPAN  255 (357)
Q Consensus       239 ~~~~-------~~~d~v~d~~g~~  255 (357)
                      +++.       +++|++++++|..
T Consensus        93 ~~~~~~~~~~~g~id~lvnnAg~~  116 (280)
T 3pgx_A           93 RELVADGMEQFGRLDVVVANAGVL  116 (280)
T ss_dssp             HHHHHHHHHHHCCCCEEEECCCCC
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCC
Confidence            4332       3799999998863

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=96.87  E-value=0.0021  Score=59.66  Aligned_cols=95  Identities=15%  Similarity=0.121  Sum_probs=68.1

Q ss_pred             CeEEEEecChHHHHHHHHHHHcC---CeEEEEeCCcHHHHHHHHhcC------Cc-EEEcCCChhHHHHhhC--CccEEE
Q 018382          182 LRGGILGLGGVGHMGVLIAKAMG---HHVTVISSSDKKRVEAMEHLG------AD-QYLVSSDATRMQEAAD--SLDYII  249 (357)
Q Consensus       182 ~~VlI~G~g~~G~~ai~la~~~g---~~V~~~~~~~~~~~~~~~~~g------~~-~vv~~~~~~~~~~~~~--~~d~v~  249 (357)
                      .+|+|+|+|.+|..+++.+...|   .+|++++++.++.+.+.+.++      .. ..+|..+.+.++++..  ++|+|+
T Consensus         2 ~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~DvVi   81 (405)
T 4ina_A            2 AKVLQIGAGGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEVKPQIVL   81 (405)
T ss_dssp             CEEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CEEEEECCCHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhCCCEEE
Confidence            37899999999999999888777   389999999988877666553      21 1345555555555554  499999


Q ss_pred             EcCCCCCChHHHHhccccCCeEEEEcc
Q 018382          250 DTVPANHPLEPYLSLLKLDGKLILTGV  276 (357)
Q Consensus       250 d~~g~~~~~~~~~~~l~~~G~~v~~g~  276 (357)
                      ++++.......+..+++.+-.++.+..
T Consensus        82 n~ag~~~~~~v~~a~l~~g~~vvD~a~  108 (405)
T 4ina_A           82 NIALPYQDLTIMEACLRTGVPYLDTAN  108 (405)
T ss_dssp             ECSCGGGHHHHHHHHHHHTCCEEESSC
T ss_pred             ECCCcccChHHHHHHHHhCCCEEEecC
Confidence            999875334455666777777776533

>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}

Probab=96.87  E-value=0.0034  Score=56.10  Aligned_cols=89  Identities=26%  Similarity=0.333  Sum_probs=66.9

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCC--
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANH--  256 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~--  256 (357)
                      -.|++|.|+|.|.+|..+++.++..|++|++.+++.++. .+.+ +|+.. .   +   ++++....|+|+.++....  
T Consensus       140 l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~-~~~~-~g~~~-~---~---l~ell~~aDvVvl~~P~~~~t  210 (313)
T 2ekl_A          140 LAGKTIGIVGFGRIGTKVGIIANAMGMKVLAYDILDIRE-KAEK-INAKA-V---S---LEELLKNSDVISLHVTVSKDA  210 (313)
T ss_dssp             CTTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSCCHH-HHHH-TTCEE-C---C---HHHHHHHCSEEEECCCCCTTS
T ss_pred             CCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCcchh-HHHh-cCcee-c---C---HHHHHhhCCEEEEeccCChHH
Confidence            467899999999999999999999999999999887664 3444 78652 1   2   2334447899999887432  


Q ss_pred             --Ch-HHHHhccccCCeEEEEcc
Q 018382          257 --PL-EPYLSLLKLDGKLILTGV  276 (357)
Q Consensus       257 --~~-~~~~~~l~~~G~~v~~g~  276 (357)
                        .+ ...++.|++++.++.++-
T Consensus       211 ~~li~~~~l~~mk~ga~lIn~ar  233 (313)
T 2ekl_A          211 KPIIDYPQFELMKDNVIIVNTSR  233 (313)
T ss_dssp             CCSBCHHHHHHSCTTEEEEESSC
T ss_pred             HHhhCHHHHhcCCCCCEEEECCC
Confidence              23 456788999988888754

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=96.87  E-value=0.003  Score=55.96  Aligned_cols=75  Identities=16%  Similarity=0.191  Sum_probs=54.4

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc----CCcE---EEcCCChhHHHHhh-------CC
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL----GADQ---YLVSSDATRMQEAA-------DS  244 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~----g~~~---vv~~~~~~~~~~~~-------~~  244 (357)
                      .++++||+|+ |++|.++++.+...|++|+++++++++.+.+.+.+    +...   ..|..+.+.++++.       +.
T Consensus        25 ~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~  104 (302)
T 1w6u_A           25 QGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGH  104 (302)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHHcCC
Confidence            5688999987 99999999999889999999999987765544333    4322   23555554433332       36


Q ss_pred             ccEEEEcCCC
Q 018382          245 LDYIIDTVPA  254 (357)
Q Consensus       245 ~d~v~d~~g~  254 (357)
                      +|++|+++|.
T Consensus       105 id~li~~Ag~  114 (302)
T 1w6u_A          105 PNIVINNAAG  114 (302)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            8999999984

>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*

Probab=96.87  E-value=0.0032  Score=54.73  Aligned_cols=89  Identities=18%  Similarity=0.266  Sum_probs=64.9

Q ss_pred             CCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCCCh-
Q 018382          180 SGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPL-  258 (357)
Q Consensus       180 ~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~~-  258 (357)
                      .+ +++|+|+|.+|.+++..+...|++|++..++.++.+.+.+.+|..  ++  +   +.+. ..+|+|+.+++....- 
T Consensus       116 ~~-~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~~~~--~~--~---~~~~-~~~Divi~~tp~~~~~~  186 (263)
T 2d5c_A          116 KG-PALVLGAGGAGRAVAFALREAGLEVWVWNRTPQRALALAEEFGLR--AV--P---LEKA-REARLLVNATRVGLEDP  186 (263)
T ss_dssp             CS-CEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHTCE--EC--C---GGGG-GGCSEEEECSSTTTTCT
T ss_pred             CC-eEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccc--hh--h---Hhhc-cCCCEEEEccCCCCCCC
Confidence            56 999999999999999999989999999999988877776667764  21  2   2234 6799999999876210 


Q ss_pred             --HH-HHhccccCCeEEEEccC
Q 018382          259 --EP-YLSLLKLDGKLILTGVI  277 (357)
Q Consensus       259 --~~-~~~~l~~~G~~v~~g~~  277 (357)
                        .. ....++++..++.++..
T Consensus       187 ~~~~l~~~~l~~g~~viD~~~~  208 (263)
T 2d5c_A          187 SASPLPAELFPEEGAAVDLVYR  208 (263)
T ss_dssp             TCCSSCGGGSCSSSEEEESCCS
T ss_pred             CCCCCCHHHcCCCCEEEEeecC
Confidence              11 14567777777776543

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=96.86  E-value=0.002  Score=56.41  Aligned_cols=75  Identities=16%  Similarity=0.124  Sum_probs=53.4

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCCcE---EEcCCChhHHHHhh------CCcc
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGADQ---YLVSSDATRMQEAA------DSLD  246 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~~~---vv~~~~~~~~~~~~------~~~d  246 (357)
                      .++++||+|+ +++|.++++.+...|++|+++++++++.+.+.+.   .+...   ..|..+.+.++++.      +++|
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g~iD  111 (275)
T 4imr_A           32 RGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAIAPVD  111 (275)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHhCCCC
Confidence            5789999987 9999999999999999999999988765544432   24322   23444543332221      4899


Q ss_pred             EEEEcCCC
Q 018382          247 YIIDTVPA  254 (357)
Q Consensus       247 ~v~d~~g~  254 (357)
                      ++++++|.
T Consensus       112 ~lvnnAg~  119 (275)
T 4imr_A          112 ILVINASA  119 (275)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999985

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=96.85  E-value=0.00078  Score=57.57  Aligned_cols=75  Identities=16%  Similarity=0.045  Sum_probs=53.6

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCC--eEEEEeCCcHHHHHHHHhcCCc-EEEcCCChhHHHHhhCCccEEEEcCCCC
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGH--HVTVISSSDKKRVEAMEHLGAD-QYLVSSDATRMQEAADSLDYIIDTVPAN  255 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~--~V~~~~~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~~~~~~d~v~d~~g~~  255 (357)
                      .+.+|||+|+ |.+|.++++.+...|.  +|+++++++++...... -+.. ...|..+.+.+.+...++|+||+++|..
T Consensus        17 ~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~-~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~   95 (242)
T 2bka_A           17 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAY-KNVNQEVVDFEKLDDYASAFQGHDVGFCCLGTT   95 (242)
T ss_dssp             TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGG-GGCEEEECCGGGGGGGGGGGSSCSEEEECCCCC
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCcccccc-CCceEEecCcCCHHHHHHHhcCCCEEEECCCcc
Confidence            3578999987 9999999999888899  99999988654322111 1222 1235555555566666899999999864

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=96.83  E-value=0.01  Score=46.72  Aligned_cols=93  Identities=20%  Similarity=0.143  Sum_probs=62.4

Q ss_pred             CCeEEEEecChHHHHHHHHHHHcCCeEEEEeCC-cHHHHHHHHhc--CCcEEE-cCCChhHHHHh-hCCccEEEEcCCCC
Q 018382          181 GLRGGILGLGGVGHMGVLIAKAMGHHVTVISSS-DKKRVEAMEHL--GADQYL-VSSDATRMQEA-ADSLDYIIDTVPAN  255 (357)
Q Consensus       181 ~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~-~~~~~~~~~~~--g~~~vv-~~~~~~~~~~~-~~~~d~v~d~~g~~  255 (357)
                      ..+++|+|+|.+|...++.+...|.+|++++++ +++.+.+.+.+  |...+. |..+++.+++. ..++|+|+-+++..
T Consensus         3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d   82 (153)
T 1id1_A            3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSDND   82 (153)
T ss_dssp             CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECSSCH
T ss_pred             CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEEEecCCh
Confidence            467999999999999999999999999999997 45555554423  443332 44445555554 45899999998875


Q ss_pred             CChHH----HHhccccCCeEEEE
Q 018382          256 HPLEP----YLSLLKLDGKLILT  274 (357)
Q Consensus       256 ~~~~~----~~~~l~~~G~~v~~  274 (357)
                       ..+.    ..+.+.+..+++..
T Consensus        83 -~~n~~~~~~a~~~~~~~~ii~~  104 (153)
T 1id1_A           83 -ADNAFVVLSAKDMSSDVKTVLA  104 (153)
T ss_dssp             -HHHHHHHHHHHHHTSSSCEEEE
T ss_pred             -HHHHHHHHHHHHHCCCCEEEEE
Confidence             2332    23334455565543

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=96.83  E-value=0.0029  Score=54.26  Aligned_cols=76  Identities=18%  Similarity=0.239  Sum_probs=53.8

Q ss_pred             CCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc---C--CcEE--EcC--CChhHHHHh-------
Q 018382          179 QSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL---G--ADQY--LVS--SDATRMQEA-------  241 (357)
Q Consensus       179 ~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~---g--~~~v--v~~--~~~~~~~~~-------  241 (357)
                      -.++++||+|+ |++|.++++.+...|++|+++++++++.+.+.+.+   +  ...+  ++.  .+.+.++++       
T Consensus        12 l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~~   91 (247)
T 3i1j_A           12 LKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEHE   91 (247)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHHh
Confidence            35789999987 99999999999999999999999988766554432   2  1222  233  443333322       


Q ss_pred             hCCccEEEEcCCC
Q 018382          242 ADSLDYIIDTVPA  254 (357)
Q Consensus       242 ~~~~d~v~d~~g~  254 (357)
                      .+++|++++++|.
T Consensus        92 ~g~id~lv~nAg~  104 (247)
T 3i1j_A           92 FGRLDGLLHNASI  104 (247)
T ss_dssp             HSCCSEEEECCCC
T ss_pred             CCCCCEEEECCcc
Confidence            2379999999885

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=96.83  E-value=0.0026  Score=56.36  Aligned_cols=75  Identities=15%  Similarity=0.196  Sum_probs=53.9

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc--------CCcE---EEcCCChhHHHHhh-----
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL--------GADQ---YLVSSDATRMQEAA-----  242 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~--------g~~~---vv~~~~~~~~~~~~-----  242 (357)
                      .++++||+|+ |++|.++++.+...|++|++++++.++.+.+.+.+        +...   ..|..+.+.++++.     
T Consensus        17 ~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   96 (303)
T 1yxm_A           17 QGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLD   96 (303)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHHH
Confidence            4688999987 99999999999889999999999887765544322        3221   23555554443332     


Q ss_pred             --CCccEEEEcCCC
Q 018382          243 --DSLDYIIDTVPA  254 (357)
Q Consensus       243 --~~~d~v~d~~g~  254 (357)
                        +++|++|+++|.
T Consensus        97 ~~g~id~li~~Ag~  110 (303)
T 1yxm_A           97 TFGKINFLVNNGGG  110 (303)
T ss_dssp             HHSCCCEEEECCCC
T ss_pred             HcCCCCEEEECCCC
Confidence              369999999983

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=96.83  E-value=0.00078  Score=59.05  Aligned_cols=102  Identities=17%  Similarity=0.036  Sum_probs=65.2

Q ss_pred             hhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEE
Q 018382          170 SPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYI  248 (357)
Q Consensus       170 ~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v  248 (357)
                      .+|...+.--.+++++|+|+|++|.+++..+...|+ +|+++.|+.++.+.+.+.+   ...   ..+...+....+|+|
T Consensus       106 ~~L~~~~~~l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~---~~~---~~~~~~~~~~~aDiV  179 (277)
T 3don_A          106 NGLKQIYEGIEDAYILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNNWSLNI---NKI---NLSHAESHLDEFDII  179 (277)
T ss_dssp             HHHHHHSTTGGGCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCSCC---EEE---CHHHHHHTGGGCSEE
T ss_pred             HHHHHhCCCcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhc---ccc---cHhhHHHHhcCCCEE
Confidence            344443332367899999999999999999999999 8999999987765443211   111   122234445589999


Q ss_pred             EEcCCCCCChH-----HHHhccccCCeEEEEccCC
Q 018382          249 IDTVPANHPLE-----PYLSLLKLDGKLILTGVIN  278 (357)
Q Consensus       249 ~d~~g~~~~~~-----~~~~~l~~~G~~v~~g~~~  278 (357)
                      |++++.. ...     .....++++..++++...+
T Consensus       180 InaTp~G-m~~~~~~~l~~~~l~~~~~V~D~vY~P  213 (277)
T 3don_A          180 INTTPAG-MNGNTDSVISLNRLASHTLVSDIVYNP  213 (277)
T ss_dssp             EECCC--------CCSSCCTTCCSSCEEEESCCSS
T ss_pred             EECccCC-CCCCCcCCCCHHHcCCCCEEEEecCCC
Confidence            9998653 111     1234567777777775443

>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A

Probab=96.83  E-value=0.0034  Score=56.90  Aligned_cols=90  Identities=18%  Similarity=0.194  Sum_probs=68.8

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCC---
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPAN---  255 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~---  255 (357)
                      -.|++|.|+|.|.+|..+++.++.+|++|++..++....+.+.+ .|...+      +.++++....|+|+.++...   
T Consensus       162 l~gktvGIIG~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~-~g~~~~------~~l~ell~~aDvV~l~~Plt~~t  234 (351)
T 3jtm_A          162 LEGKTIGTVGAGRIGKLLLQRLKPFGCNLLYHDRLQMAPELEKE-TGAKFV------EDLNEMLPKCDVIVINMPLTEKT  234 (351)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHGGGCCEEEEECSSCCCHHHHHH-HCCEEC------SCHHHHGGGCSEEEECSCCCTTT
T ss_pred             ccCCEEeEEEeCHHHHHHHHHHHHCCCEEEEeCCCccCHHHHHh-CCCeEc------CCHHHHHhcCCEEEECCCCCHHH
Confidence            35889999999999999999999999999999987655555555 676432      12455667899999887642   


Q ss_pred             -CCh-HHHHhccccCCeEEEEc
Q 018382          256 -HPL-EPYLSLLKLDGKLILTG  275 (357)
Q Consensus       256 -~~~-~~~~~~l~~~G~~v~~g  275 (357)
                       ..+ ...++.|+++..++.++
T Consensus       235 ~~li~~~~l~~mk~gailIN~a  256 (351)
T 3jtm_A          235 RGMFNKELIGKLKKGVLIVNNA  256 (351)
T ss_dssp             TTCBSHHHHHHSCTTEEEEECS
T ss_pred             HHhhcHHHHhcCCCCCEEEECc
Confidence             122 56778899999988875

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=96.83  E-value=0.0029  Score=54.65  Aligned_cols=74  Identities=14%  Similarity=0.139  Sum_probs=54.2

Q ss_pred             CCeEEEEec-ChHHHHHHHHHHHc--CCeEEEEeCCcHHHHHHHHhcCCcE---EEcCCChhHHHHhh-------CCccE
Q 018382          181 GLRGGILGL-GGVGHMGVLIAKAM--GHHVTVISSSDKKRVEAMEHLGADQ---YLVSSDATRMQEAA-------DSLDY  247 (357)
Q Consensus       181 ~~~VlI~G~-g~~G~~ai~la~~~--g~~V~~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~~-------~~~d~  247 (357)
                      ++++||+|+ +++|.++++.+...  |++|+.+.+++++.+.+.+.+|...   ..|..+.+.++++.       +++|+
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   81 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKGHGKIDS   81 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHhcCCccE
Confidence            578899987 99999988776655  4789999999888887777666432   23556654443332       37999


Q ss_pred             EEEcCCC
Q 018382          248 IIDTVPA  254 (357)
Q Consensus       248 v~d~~g~  254 (357)
                      +++++|.
T Consensus        82 lvnnAg~   88 (254)
T 3kzv_A           82 LVANAGV   88 (254)
T ss_dssp             EEEECCC
T ss_pred             EEECCcc
Confidence            9999985

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=96.82  E-value=0.0031  Score=54.62  Aligned_cols=75  Identities=19%  Similarity=0.286  Sum_probs=53.4

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEE-eCCcHHHHHHHHh---cCCcE---EEcCCChhHHHHh-------hCC
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVI-SSSDKKRVEAMEH---LGADQ---YLVSSDATRMQEA-------ADS  244 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~-~~~~~~~~~~~~~---~g~~~---vv~~~~~~~~~~~-------~~~  244 (357)
                      .++++||+|+ |++|.++++.+...|++|+++ .+++++.+.+.+.   .|...   ..|..+.+.++++       .++
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGR   82 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            5788999987 999999999999999999987 7777665554442   34322   2355565443333       247


Q ss_pred             ccEEEEcCCC
Q 018382          245 LDYIIDTVPA  254 (357)
Q Consensus       245 ~d~v~d~~g~  254 (357)
                      +|++++++|.
T Consensus        83 id~lv~nAg~   92 (258)
T 3oid_A           83 LDVFVNNAAS   92 (258)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            8999999974

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=96.82  E-value=0.0034  Score=54.52  Aligned_cols=76  Identities=16%  Similarity=0.199  Sum_probs=55.1

Q ss_pred             CCCCeEEEEec-C-hHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc---C-Cc---EEEcCCChhHHHHhh-------
Q 018382          179 QSGLRGGILGL-G-GVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL---G-AD---QYLVSSDATRMQEAA-------  242 (357)
Q Consensus       179 ~~~~~VlI~G~-g-~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~---g-~~---~vv~~~~~~~~~~~~-------  242 (357)
                      -.++++||+|+ | ++|.++++.+...|++|++++++.++.+.+.+.+   + ..   ...|..+.+.++++.       
T Consensus        20 l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   99 (266)
T 3o38_A           20 LKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKA   99 (266)
T ss_dssp             TTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHh
Confidence            35789999987 6 7999999999888999999999988766655434   2 11   123555654433322       


Q ss_pred             CCccEEEEcCCC
Q 018382          243 DSLDYIIDTVPA  254 (357)
Q Consensus       243 ~~~d~v~d~~g~  254 (357)
                      +++|++|+++|.
T Consensus       100 g~id~li~~Ag~  111 (266)
T 3o38_A          100 GRLDVLVNNAGL  111 (266)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCcEEEECCCc
Confidence            379999999985

>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A

Probab=96.81  E-value=0.003  Score=57.65  Aligned_cols=90  Identities=16%  Similarity=0.162  Sum_probs=67.8

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCCe-EEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCC--
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGHH-VTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPAN--  255 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~-V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~--  255 (357)
                      -.|++|.|+|.|.+|..+++.++..|++ |++.+++..+.+.+.+ +|+..+   .   .+.++....|+|+.++...  
T Consensus       162 l~g~tvgIIG~G~IG~~vA~~l~~~G~~~V~~~d~~~~~~~~~~~-~g~~~~---~---~l~ell~~aDvV~l~~P~t~~  234 (364)
T 2j6i_A          162 IEGKTIATIGAGRIGYRVLERLVPFNPKELLYYDYQALPKDAEEK-VGARRV---E---NIEELVAQADIVTVNAPLHAG  234 (364)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHGGGCCSEEEEECSSCCCHHHHHH-TTEEEC---S---SHHHHHHTCSEEEECCCCSTT
T ss_pred             CCCCEEEEECcCHHHHHHHHHHHhCCCcEEEEECCCccchhHHHh-cCcEec---C---CHHHHHhcCCEEEECCCCChH
Confidence            3688999999999999999999999997 9999987655555555 775421   1   1334455799999988763  


Q ss_pred             --CCh-HHHHhccccCCeEEEEc
Q 018382          256 --HPL-EPYLSLLKLDGKLILTG  275 (357)
Q Consensus       256 --~~~-~~~~~~l~~~G~~v~~g  275 (357)
                        ..+ ...++.|+++..++.++
T Consensus       235 t~~li~~~~l~~mk~ga~lIn~a  257 (364)
T 2j6i_A          235 TKGLINKELLSKFKKGAWLVNTA  257 (364)
T ss_dssp             TTTCBCHHHHTTSCTTEEEEECS
T ss_pred             HHHHhCHHHHhhCCCCCEEEECC
Confidence              233 35778899999888875

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=96.81  E-value=0.0035  Score=55.03  Aligned_cols=76  Identities=14%  Similarity=0.150  Sum_probs=52.1

Q ss_pred             CCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeC-CcHHHHHHHHh---cCCcE---EEcCCChhHHHHh-------hC
Q 018382          179 QSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISS-SDKKRVEAMEH---LGADQ---YLVSSDATRMQEA-------AD  243 (357)
Q Consensus       179 ~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~-~~~~~~~~~~~---~g~~~---vv~~~~~~~~~~~-------~~  243 (357)
                      -.++++||+|+ |++|.++++.+...|++|+++++ ++++.+.+.+.   .|...   ..|..+.+.++++       .+
T Consensus        27 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  106 (280)
T 4da9_A           27 KARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEFG  106 (280)
T ss_dssp             CCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHHS
T ss_pred             cCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            35788999987 99999999999999999999985 55544433322   34322   2355555443332       23


Q ss_pred             CccEEEEcCCC
Q 018382          244 SLDYIIDTVPA  254 (357)
Q Consensus       244 ~~d~v~d~~g~  254 (357)
                      ++|++++++|.
T Consensus       107 ~iD~lvnnAg~  117 (280)
T 4da9_A          107 RIDCLVNNAGI  117 (280)
T ss_dssp             CCCEEEEECC-
T ss_pred             CCCEEEECCCc
Confidence            79999999986

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=96.81  E-value=0.0063  Score=53.39  Aligned_cols=75  Identities=8%  Similarity=0.102  Sum_probs=51.8

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeC-CcHHHHHHHHhc----CCcE-E--EcCCChhHHHHhh-------C
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISS-SDKKRVEAMEHL----GADQ-Y--LVSSDATRMQEAA-------D  243 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~-~~~~~~~~~~~~----g~~~-v--v~~~~~~~~~~~~-------~  243 (357)
                      .++++||+|+ |++|.++++.+...|++|+++++ ++++.+.+.+.+    +... .  .|..+.+.++++.       +
T Consensus        24 ~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  103 (281)
T 3v2h_A           24 MTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADRFG  103 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHHTS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHHCC
Confidence            4688999987 99999999999999999999998 444444433322    3222 1  3555554433322       3


Q ss_pred             CccEEEEcCCC
Q 018382          244 SLDYIIDTVPA  254 (357)
Q Consensus       244 ~~d~v~d~~g~  254 (357)
                      ++|++++++|.
T Consensus       104 ~iD~lv~nAg~  114 (281)
T 3v2h_A          104 GADILVNNAGV  114 (281)
T ss_dssp             SCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999886

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=96.80  E-value=0.004  Score=54.47  Aligned_cols=76  Identities=16%  Similarity=0.215  Sum_probs=52.9

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCC------------cHHHHHHHH---hcCCcE---EEcCCChhHHHH
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSS------------DKKRVEAME---HLGADQ---YLVSSDATRMQE  240 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~------------~~~~~~~~~---~~g~~~---vv~~~~~~~~~~  240 (357)
                      .++++||+|+ +++|.++++.+...|++|++++++            .++.+...+   ..+...   ..|..+.+.+++
T Consensus        12 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   91 (278)
T 3sx2_A           12 TGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLSA   91 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHH
Confidence            5789999987 999999999999999999999876            444333322   234322   235566544443


Q ss_pred             hh-------CCccEEEEcCCCC
Q 018382          241 AA-------DSLDYIIDTVPAN  255 (357)
Q Consensus       241 ~~-------~~~d~v~d~~g~~  255 (357)
                      +.       +++|++++++|..
T Consensus        92 ~~~~~~~~~g~id~lv~nAg~~  113 (278)
T 3sx2_A           92 ALQAGLDELGRLDIVVANAGIA  113 (278)
T ss_dssp             HHHHHHHHHCCCCEEEECCCCC
T ss_pred             HHHHHHHHcCCCCEEEECCCCC
Confidence            32       3799999999863

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=96.80  E-value=0.005  Score=53.29  Aligned_cols=74  Identities=16%  Similarity=0.165  Sum_probs=53.1

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc---CCcE---EEcCCChhHHH----Hh----hCC
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL---GADQ---YLVSSDATRMQ----EA----ADS  244 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~---g~~~---vv~~~~~~~~~----~~----~~~  244 (357)
                      .++++||+|+ |++|.++++.+...|++|+++++++++.+.+.+.+   |...   ..|..+.+.++    ++    .++
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~   83 (260)
T 2qq5_A            4 NGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQGR   83 (260)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            4678999987 99999999999989999999999887765554433   4221   23555544333    22    347


Q ss_pred             ccEEEEcCC
Q 018382          245 LDYIIDTVP  253 (357)
Q Consensus       245 ~d~v~d~~g  253 (357)
                      +|++++++|
T Consensus        84 id~lvnnAg   92 (260)
T 2qq5_A           84 LDVLVNNAY   92 (260)
T ss_dssp             CCEEEECCC
T ss_pred             ceEEEECCc
Confidence            899999994

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=96.80  E-value=0.0028  Score=55.25  Aligned_cols=76  Identities=18%  Similarity=0.197  Sum_probs=52.6

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeC-CcHHHHHHHH---hcCCcE---EEcCCChhHHHHhh-------CC
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISS-SDKKRVEAME---HLGADQ---YLVSSDATRMQEAA-------DS  244 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~-~~~~~~~~~~---~~g~~~---vv~~~~~~~~~~~~-------~~  244 (357)
                      .++++||+|+ |++|.++++.+...|++|+++.+ ++++.+.+.+   ..|...   ..|..+.+.++++.       ++
T Consensus        27 ~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~  106 (269)
T 4dmm_A           27 TDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERWGR  106 (269)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            5788999987 99999999999899999999888 4444443332   234322   23566654443332       37


Q ss_pred             ccEEEEcCCCC
Q 018382          245 LDYIIDTVPAN  255 (357)
Q Consensus       245 ~d~v~d~~g~~  255 (357)
                      +|++++++|..
T Consensus       107 id~lv~nAg~~  117 (269)
T 4dmm_A          107 LDVLVNNAGIT  117 (269)
T ss_dssp             CCEEEECCCCC
T ss_pred             CCEEEECCCCC
Confidence            99999998763

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=96.79  E-value=0.0027  Score=55.91  Aligned_cols=75  Identities=11%  Similarity=0.125  Sum_probs=53.2

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCc-HHHHHHHHh----cCCcE---EEcCCC----hhHHHHhh----
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSD-KKRVEAMEH----LGADQ---YLVSSD----ATRMQEAA----  242 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~-~~~~~~~~~----~g~~~---vv~~~~----~~~~~~~~----  242 (357)
                      .++++||+|+ |++|.++++.+...|++|+++++++ ++.+.+.+.    .|...   ..|..+    .+.++++.    
T Consensus        22 ~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~~  101 (288)
T 2x9g_A           22 EAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINSCF  101 (288)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHHHH
Confidence            4678999987 9999999999888899999999987 655444332    34321   245555    44433322    


Q ss_pred             ---CCccEEEEcCCC
Q 018382          243 ---DSLDYIIDTVPA  254 (357)
Q Consensus       243 ---~~~d~v~d~~g~  254 (357)
                         +++|++|+++|.
T Consensus       102 ~~~g~iD~lvnnAG~  116 (288)
T 2x9g_A          102 RAFGRCDVLVNNASA  116 (288)
T ss_dssp             HHHSCCCEEEECCCC
T ss_pred             HhcCCCCEEEECCCC
Confidence               379999999885

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=96.79  E-value=0.005  Score=54.11  Aligned_cols=75  Identities=15%  Similarity=0.160  Sum_probs=52.8

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCC----------------cHHHHHHHHh---cCCcE---EEcCCChh
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSS----------------DKKRVEAMEH---LGADQ---YLVSSDAT  236 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~----------------~~~~~~~~~~---~g~~~---vv~~~~~~  236 (357)
                      .++++||+|+ +++|.++++.+...|++|++++++                +++.+.+.+.   .+...   ..|..+.+
T Consensus        10 ~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~   89 (286)
T 3uve_A           10 EGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDYD   89 (286)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCHH
Confidence            5789999987 999999999999999999999876                4444443332   33222   23566654


Q ss_pred             HHHHhh-------CCccEEEEcCCC
Q 018382          237 RMQEAA-------DSLDYIIDTVPA  254 (357)
Q Consensus       237 ~~~~~~-------~~~d~v~d~~g~  254 (357)
                      .++++.       +++|++++++|.
T Consensus        90 ~v~~~~~~~~~~~g~id~lv~nAg~  114 (286)
T 3uve_A           90 ALKAAVDSGVEQLGRLDIIVANAGI  114 (286)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred             HHHHHHHHHHHHhCCCCEEEECCcc
Confidence            444332       379999999885

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=96.77  E-value=0.0097  Score=51.63  Aligned_cols=69  Identities=14%  Similarity=0.091  Sum_probs=50.0

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCc-EEEcCCChhHHHHhh-------CCccEEEE
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGAD-QYLVSSDATRMQEAA-------DSLDYIID  250 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~~~-------~~~d~v~d  250 (357)
                      .++++||+|+ |++|.++++.+...|++|+++++++++     . -... ...|..+.+.++++.       +++|++++
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-----~-~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~   80 (264)
T 2dtx_A            7 RDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG-----E-AKYDHIECDVTNPDQVKASIDHIFKEYGSISVLVN   80 (264)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC-----S-CSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc-----C-CceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            4688999987 999999999999999999999987654     1 1222 224556654443332       37999999


Q ss_pred             cCCC
Q 018382          251 TVPA  254 (357)
Q Consensus       251 ~~g~  254 (357)
                      ++|.
T Consensus        81 ~Ag~   84 (264)
T 2dtx_A           81 NAGI   84 (264)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            9885

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=96.77  E-value=0.0035  Score=53.77  Aligned_cols=73  Identities=12%  Similarity=0.036  Sum_probs=52.7

Q ss_pred             CCeEEEEec-ChHHHHHHHHHHHcCCeEEEE-e--CCcHHHHHHHHhc-CCcEEEcCCC-hhHHHHhh---CCccEEEEc
Q 018382          181 GLRGGILGL-GGVGHMGVLIAKAMGHHVTVI-S--SSDKKRVEAMEHL-GADQYLVSSD-ATRMQEAA---DSLDYIIDT  251 (357)
Q Consensus       181 ~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~-~--~~~~~~~~~~~~~-g~~~vv~~~~-~~~~~~~~---~~~d~v~d~  251 (357)
                      ++++||+|+ |++|.++++.+...|++|+++ .  +++++.+.+.+.+ +.+ +.+..+ ...++++.   +++|+++++
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~g~iD~lv~~   79 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESENPGTI-ALAEQKPERLVDATLQHGEAIDTIVSN   79 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHSTTEE-ECCCCCGGGHHHHHGGGSSCEEEEEEC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHhCCCc-ccCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            467899987 999999999999999999999 6  8888777666655 432 334333 23344443   379999999


Q ss_pred             CCC
Q 018382          252 VPA  254 (357)
Q Consensus       252 ~g~  254 (357)
                      +|.
T Consensus        80 Ag~   82 (244)
T 1zmo_A           80 DYI   82 (244)
T ss_dssp             CCC
T ss_pred             CCc
Confidence            884

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=96.77  E-value=0.0073  Score=52.28  Aligned_cols=76  Identities=17%  Similarity=0.298  Sum_probs=53.1

Q ss_pred             CCCeEEEEec---ChHHHHHHHHHHHcCCeEEEEeCCcH---HHHHHHHhcCCcEE--EcCCChhHHHHhh-------CC
Q 018382          180 SGLRGGILGL---GGVGHMGVLIAKAMGHHVTVISSSDK---KRVEAMEHLGADQY--LVSSDATRMQEAA-------DS  244 (357)
Q Consensus       180 ~~~~VlI~G~---g~~G~~ai~la~~~g~~V~~~~~~~~---~~~~~~~~~g~~~v--v~~~~~~~~~~~~-------~~  244 (357)
                      .++++||+|+   |++|.++++.+...|++|++++++++   ..+.+.+..+....  .|..+.+.++++.       ++
T Consensus         7 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   86 (261)
T 2wyu_A            7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFGG   86 (261)
T ss_dssp             TTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            4688999975   69999999888888999999998875   33444443453222  3556654443332       37


Q ss_pred             ccEEEEcCCCC
Q 018382          245 LDYIIDTVPAN  255 (357)
Q Consensus       245 ~d~v~d~~g~~  255 (357)
                      +|++++++|..
T Consensus        87 iD~lv~~Ag~~   97 (261)
T 2wyu_A           87 LDYLVHAIAFA   97 (261)
T ss_dssp             EEEEEECCCCC
T ss_pred             CCEEEECCCCC
Confidence            99999999853

>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*

Probab=96.76  E-value=0.0042  Score=56.19  Aligned_cols=99  Identities=21%  Similarity=0.241  Sum_probs=62.0

Q ss_pred             hhccCC-CCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCC----------------
Q 018382          172 LSHFGL-KQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSD----------------  234 (357)
Q Consensus       172 l~~~~~-~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~----------------  234 (357)
                      +...+. --+|++|.|.|.|.+|+.+++.++..|++|++.+.+.++.+.. +.+|++.+ +..+                
T Consensus       165 ~~~~G~~~L~GktV~I~G~GnVG~~~A~~l~~~GakVvvsD~~~~~~~~a-~~~ga~~v-~~~ell~~~~DIliP~A~~~  242 (355)
T 1c1d_A          165 VAHRGLGSLDGLTVLVQGLGAVGGSLASLAAEAGAQLLVADTDTERVAHA-VALGHTAV-ALEDVLSTPCDVFAPCAMGG  242 (355)
T ss_dssp             HHHTTCCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH-HHTTCEEC-CGGGGGGCCCSEEEECSCSC
T ss_pred             HHhcCCCCCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCccHHHHH-HhcCCEEe-ChHHhhcCccceecHhHHHh
Confidence            344443 2578999999999999999999999999999887776653333 44776543 2110                


Q ss_pred             ---hhHHHHhhCCccEEEEcCCCCCChHHHHhccccCCeEEEE
Q 018382          235 ---ATRMQEAADSLDYIIDTVPANHPLEPYLSLLKLDGKLILT  274 (357)
Q Consensus       235 ---~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~  274 (357)
                         .+.++.+  +.++|+++++.+-..+.+.+.|..+|.++.-
T Consensus       243 ~I~~~~~~~l--k~~iVie~AN~p~t~~eA~~~L~~~gIlv~P  283 (355)
T 1c1d_A          243 VITTEVARTL--DCSVVAGAANNVIADEAASDILHARGILYAP  283 (355)
T ss_dssp             CBCHHHHHHC--CCSEECCSCTTCBCSHHHHHHHHHTTCEECC
T ss_pred             hcCHHHHhhC--CCCEEEECCCCCCCCHHHHHHHHhCCEEEEC
Confidence               0011111  4566666666552223556666666665543

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.76  E-value=0.0027  Score=54.26  Aligned_cols=74  Identities=14%  Similarity=0.074  Sum_probs=53.8

Q ss_pred             CCeEEEEec-ChHHHHHHHHHHHcC--CeEEEEeCCcHHHHHHHHhc-CCc---EEEcCCChhHHHHhh-------C--C
Q 018382          181 GLRGGILGL-GGVGHMGVLIAKAMG--HHVTVISSSDKKRVEAMEHL-GAD---QYLVSSDATRMQEAA-------D--S  244 (357)
Q Consensus       181 ~~~VlI~G~-g~~G~~ai~la~~~g--~~V~~~~~~~~~~~~~~~~~-g~~---~vv~~~~~~~~~~~~-------~--~  244 (357)
                      ++++||+|+ |++|.++++.+...|  ++|++++++.++.+.+.+ . +..   ...|..+.+.++++.       +  +
T Consensus         3 ~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~~   81 (250)
T 1yo6_A            3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKS-IKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDG   81 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHT-CCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGC
T ss_pred             CCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHh-ccCCceEEEEeecCCHHHHHHHHHHHHHhcCCCC
Confidence            578999987 999999999998899  999999999887766654 4 322   124555554433332       2  7


Q ss_pred             ccEEEEcCCCC
Q 018382          245 LDYIIDTVPAN  255 (357)
Q Consensus       245 ~d~v~d~~g~~  255 (357)
                      +|++|+++|..
T Consensus        82 id~li~~Ag~~   92 (250)
T 1yo6_A           82 LSLLINNAGVL   92 (250)
T ss_dssp             CCEEEECCCCC
T ss_pred             CcEEEECCccc
Confidence            99999998754

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=96.76  E-value=0.0052  Score=52.54  Aligned_cols=75  Identities=13%  Similarity=0.185  Sum_probs=50.2

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEE-eCCcHHHHHHHHh---cCCcE---EEcCCChhHHHHhh-------CC
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVI-SSSDKKRVEAMEH---LGADQ---YLVSSDATRMQEAA-------DS  244 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~-~~~~~~~~~~~~~---~g~~~---vv~~~~~~~~~~~~-------~~  244 (357)
                      .++++||+|+ |++|.++++.+...|++|+++ .+++++.+.+.+.   .+...   ..|..+.+.++++.       ++
T Consensus         4 ~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   83 (247)
T 2hq1_A            4 KGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFGR   83 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            4678999987 999999999998899999998 5555544433322   34322   23555554444332       37


Q ss_pred             ccEEEEcCCC
Q 018382          245 LDYIIDTVPA  254 (357)
Q Consensus       245 ~d~v~d~~g~  254 (357)
                      +|++|+++|.
T Consensus        84 ~d~vi~~Ag~   93 (247)
T 2hq1_A           84 IDILVNNAGI   93 (247)
T ss_dssp             CCEEEECC--
T ss_pred             CCEEEECCCC
Confidence            9999999875

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=96.75  E-value=0.0056  Score=54.11  Aligned_cols=75  Identities=19%  Similarity=0.110  Sum_probs=56.4

Q ss_pred             CCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCc-------HHHHHHHH--hcCCcE-EEcCCChhHHHHhhCCccEEE
Q 018382          181 GLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSD-------KKRVEAME--HLGADQ-YLVSSDATRMQEAADSLDYII  249 (357)
Q Consensus       181 ~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~-------~~~~~~~~--~~g~~~-vv~~~~~~~~~~~~~~~d~v~  249 (357)
                      +.+|||+|+ |.+|..+++.+...|.+|++++++.       ++.+.+.+  ..|... ..|..+.+.+.+...++|+||
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi   81 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIKQVDIVI   81 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhCCCEEE
Confidence            357999997 9999999998888899999999986       44433322  145433 246667777777777999999


Q ss_pred             EcCCCC
Q 018382          250 DTVPAN  255 (357)
Q Consensus       250 d~~g~~  255 (357)
                      .+++..
T Consensus        82 ~~a~~~   87 (307)
T 2gas_A           82 CAAGRL   87 (307)
T ss_dssp             ECSSSS
T ss_pred             ECCccc
Confidence            999864

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=96.75  E-value=0.00054  Score=60.99  Aligned_cols=118  Identities=14%  Similarity=0.143  Sum_probs=76.4

Q ss_pred             ccccchhhhhhhhhhc---------cCCCCCCCeEEEEecC-hHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCc-
Q 018382          159 APLLCAGVTVFSPLSH---------FGLKQSGLRGGILGLG-GVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGAD-  227 (357)
Q Consensus       159 a~~~~~~~ta~~~l~~---------~~~~~~~~~VlI~G~g-~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~-  227 (357)
                      ..+||....+...+++         .+.--.|.+|+|+|+| .+|..+++++...|++|++..++..+.....+.++.. 
T Consensus       146 ~~~PcTp~a~v~ll~~~~~~~~~~~~g~~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~~  225 (320)
T 1edz_A          146 SILPCTPLAIVKILEFLKIYNNLLPEGNRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNK  225 (320)
T ss_dssp             CCCCHHHHHHHHHHHHTTCSCTTSCTTCTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCC
T ss_pred             CcCCCcHHHHHHHHHhhcccccccccCCCCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhhhc
Confidence            4667776667666666         3422478999999997 5699999999999999998877633321111113321 


Q ss_pred             EEE-cC--CChhHHHHhhCCccEEEEcCCCCCC-hHHHHhccccCCeEEEEccCC
Q 018382          228 QYL-VS--SDATRMQEAADSLDYIIDTVPANHP-LEPYLSLLKLDGKLILTGVIN  278 (357)
Q Consensus       228 ~vv-~~--~~~~~~~~~~~~~d~v~d~~g~~~~-~~~~~~~l~~~G~~v~~g~~~  278 (357)
                      +.. ..  .+++.+++....+|+||.+++.... +.  .+.++++-.+++++...
T Consensus       226 ~~~t~~~~t~~~~L~e~l~~ADIVIsAtg~p~~vI~--~e~vk~GavVIDVgi~r  278 (320)
T 1edz_A          226 HHVEDLGEYSEDLLKKCSLDSDVVITGVPSENYKFP--TEYIKEGAVCINFACTK  278 (320)
T ss_dssp             CEEEEEEECCHHHHHHHHHHCSEEEECCCCTTCCBC--TTTSCTTEEEEECSSSC
T ss_pred             ccccccccccHhHHHHHhccCCEEEECCCCCcceeC--HHHcCCCeEEEEcCCCc
Confidence            100 00  1113456666789999999998743 32  34478877788887754

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=96.75  E-value=0.0043  Score=53.53  Aligned_cols=74  Identities=15%  Similarity=0.194  Sum_probs=51.2

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHH--HHHHHHhcCCcE-E--EcCCChhHHHHhh-------CCcc
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKK--RVEAMEHLGADQ-Y--LVSSDATRMQEAA-------DSLD  246 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~--~~~~~~~~g~~~-v--v~~~~~~~~~~~~-------~~~d  246 (357)
                      .++++||+|+ |++|.++++.+...|++|+++++++++  .+.+.+ .|... .  .|..+.+.++++.       +++|
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~-~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   81 (255)
T 2q2v_A            3 KGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIAR-HGVKAVHHPADLSDVAQIEALFALAEREFGGVD   81 (255)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHT-TSCCEEEECCCTTSHHHHHHHHHHHHHHHSSCS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHh-cCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            4678999987 999999999998899999999887652  122222 34322 1  3555554444332       3799


Q ss_pred             EEEEcCCC
Q 018382          247 YIIDTVPA  254 (357)
Q Consensus       247 ~v~d~~g~  254 (357)
                      ++|+++|.
T Consensus        82 ~lv~~Ag~   89 (255)
T 2q2v_A           82 ILVNNAGI   89 (255)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999884

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=96.74  E-value=0.0045  Score=52.86  Aligned_cols=74  Identities=15%  Similarity=0.074  Sum_probs=53.1

Q ss_pred             CCeEEEEec-ChHHHHHHHHHHHcCC-------eEEEEeCCcHHHHHHHHhc---CCc---EEEcCCChhHHHHhh----
Q 018382          181 GLRGGILGL-GGVGHMGVLIAKAMGH-------HVTVISSSDKKRVEAMEHL---GAD---QYLVSSDATRMQEAA----  242 (357)
Q Consensus       181 ~~~VlI~G~-g~~G~~ai~la~~~g~-------~V~~~~~~~~~~~~~~~~~---g~~---~vv~~~~~~~~~~~~----  242 (357)
                      ++++||+|+ |++|.++++.+...|+       +|+++.++.++.+.+.+.+   +..   ...|..+.+.++++.    
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   81 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIV   81 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHHH
Confidence            567999987 9999999988888898       9999999887766554433   422   123555554443332    


Q ss_pred             ---CCccEEEEcCCC
Q 018382          243 ---DSLDYIIDTVPA  254 (357)
Q Consensus       243 ---~~~d~v~d~~g~  254 (357)
                         +++|++|+++|.
T Consensus        82 ~~~g~id~li~~Ag~   96 (244)
T 2bd0_A           82 ERYGHIDCLVNNAGV   96 (244)
T ss_dssp             HHTSCCSEEEECCCC
T ss_pred             HhCCCCCEEEEcCCc
Confidence               379999999885

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=96.74  E-value=0.0048  Score=53.97  Aligned_cols=76  Identities=18%  Similarity=0.226  Sum_probs=52.7

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeC-------------CcHHHHHHHH---hcCCcE---EEcCCChhHHH
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISS-------------SDKKRVEAME---HLGADQ---YLVSSDATRMQ  239 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~-------------~~~~~~~~~~---~~g~~~---vv~~~~~~~~~  239 (357)
                      .++++||+|+ +++|.++++.+...|++|+++++             ++++.+...+   ..+...   ..|..+.+.++
T Consensus        10 ~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (277)
T 3tsc_A           10 EGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRLR   89 (277)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHH
Confidence            5789999987 99999999999999999999987             4444443332   134322   23556654443


Q ss_pred             Hhh-------CCccEEEEcCCCC
Q 018382          240 EAA-------DSLDYIIDTVPAN  255 (357)
Q Consensus       240 ~~~-------~~~d~v~d~~g~~  255 (357)
                      ++.       +++|++++++|..
T Consensus        90 ~~~~~~~~~~g~id~lvnnAg~~  112 (277)
T 3tsc_A           90 KVVDDGVAALGRLDIIVANAGVA  112 (277)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCC
T ss_pred             HHHHHHHHHcCCCCEEEECCCCC
Confidence            332       4799999999863

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=96.74  E-value=0.0078  Score=51.76  Aligned_cols=75  Identities=8%  Similarity=0.046  Sum_probs=51.5

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCe-EEEEeCCc--HHHHHHHHhc-CCc---EEEcCCCh-hHHHHh-------hC
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHH-VTVISSSD--KKRVEAMEHL-GAD---QYLVSSDA-TRMQEA-------AD  243 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~-V~~~~~~~--~~~~~~~~~~-g~~---~vv~~~~~-~~~~~~-------~~  243 (357)
                      .++++||+|+ |++|.++++.+...|++ |+++++++  +..+.+.+.. +..   ...|..+. +.++++       .+
T Consensus         4 ~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   83 (254)
T 1sby_A            4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLK   83 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHhcC
Confidence            4678999987 99999999999999996 89888876  3444444433 221   12355554 433332       23


Q ss_pred             CccEEEEcCCC
Q 018382          244 SLDYIIDTVPA  254 (357)
Q Consensus       244 ~~d~v~d~~g~  254 (357)
                      ++|++|+++|.
T Consensus        84 ~id~lv~~Ag~   94 (254)
T 1sby_A           84 TVDILINGAGI   94 (254)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCcc
Confidence            79999999985

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=96.73  E-value=0.0042  Score=54.76  Aligned_cols=75  Identities=15%  Similarity=0.170  Sum_probs=53.7

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCC---eEEEEeCCcHHHHHHHHhc-----CCcE---EEcCCChhHHHHhh-----
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGH---HVTVISSSDKKRVEAMEHL-----GADQ---YLVSSDATRMQEAA-----  242 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~---~V~~~~~~~~~~~~~~~~~-----g~~~---vv~~~~~~~~~~~~-----  242 (357)
                      .++++||+|+ +++|.++++.+...|+   +|+++.+++++.+.+.+.+     +...   ..|..+.+.++++.     
T Consensus        32 ~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  111 (287)
T 3rku_A           32 AKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQ  111 (287)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSCG
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            5689999987 9999998887766676   9999999988776665433     3221   23556655444432     


Q ss_pred             --CCccEEEEcCCC
Q 018382          243 --DSLDYIIDTVPA  254 (357)
Q Consensus       243 --~~~d~v~d~~g~  254 (357)
                        +++|++++++|.
T Consensus       112 ~~g~iD~lVnnAG~  125 (287)
T 3rku_A          112 EFKDIDILVNNAGK  125 (287)
T ss_dssp             GGCSCCEEEECCCC
T ss_pred             hcCCCCEEEECCCc
Confidence              279999999984

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=96.73  E-value=0.0059  Score=53.36  Aligned_cols=76  Identities=18%  Similarity=0.171  Sum_probs=52.1

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHH--hcCCc---EEEcCCChhHHHHhh------CCccE
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAME--HLGAD---QYLVSSDATRMQEAA------DSLDY  247 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~--~~g~~---~vv~~~~~~~~~~~~------~~~d~  247 (357)
                      .++++||+|+ +++|.++++.+...|++|+++++++...+...+  ..+..   ...|..+.+.++++.      +++|+
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g~iD~  109 (273)
T 3uf0_A           30 AGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKEVADEIADGGGSAEAVVADLADLEGAANVAEELAATRRVDV  109 (273)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTHHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhcCCCcE
Confidence            5789999987 999999999998999999999976543332222  12322   123555554443332      37999


Q ss_pred             EEEcCCCC
Q 018382          248 IIDTVPAN  255 (357)
Q Consensus       248 v~d~~g~~  255 (357)
                      +++++|..
T Consensus       110 lv~nAg~~  117 (273)
T 3uf0_A          110 LVNNAGII  117 (273)
T ss_dssp             EEECCCCC
T ss_pred             EEECCCCC
Confidence            99998863

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=96.72  E-value=0.0089  Score=52.31  Aligned_cols=75  Identities=16%  Similarity=0.224  Sum_probs=52.1

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCC------------cHHHHHHH---HhcCCcE---EEcCCChhHHHH
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSS------------DKKRVEAM---EHLGADQ---YLVSSDATRMQE  240 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~------------~~~~~~~~---~~~g~~~---vv~~~~~~~~~~  240 (357)
                      .++++||+|+ +++|.++++.+...|++|++++++            .++.+...   +..|...   ..|..+.+.+++
T Consensus         9 ~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~   88 (281)
T 3s55_A            9 EGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALES   88 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHH
Confidence            5789999987 999999999999999999999986            33333222   2245332   235566544333


Q ss_pred             hh-------CCccEEEEcCCC
Q 018382          241 AA-------DSLDYIIDTVPA  254 (357)
Q Consensus       241 ~~-------~~~d~v~d~~g~  254 (357)
                      +.       +++|++++++|.
T Consensus        89 ~~~~~~~~~g~id~lv~nAg~  109 (281)
T 3s55_A           89 FVAEAEDTLGGIDIAITNAGI  109 (281)
T ss_dssp             HHHHHHHHHTCCCEEEECCCC
T ss_pred             HHHHHHHhcCCCCEEEECCCC
Confidence            32       379999999885

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=96.72  E-value=0.0018  Score=56.65  Aligned_cols=102  Identities=17%  Similarity=0.155  Sum_probs=66.5

Q ss_pred             hhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCC--c-EEEcCCChhHHHHhh-CCcc
Q 018382          171 PLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGA--D-QYLVSSDATRMQEAA-DSLD  246 (357)
Q Consensus       171 ~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~--~-~vv~~~~~~~~~~~~-~~~d  246 (357)
                      +|...+.--++++++|+|+|++|.+++..+...|.+|++..++.++.+.+.+.++.  . ...+.      +++. +.+|
T Consensus       109 ~L~~~~~~~~~~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~~~~~~~~------~~~~~~~~D  182 (272)
T 1p77_A          109 DLQRLNWLRPNQHVLILGAGGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSM------DSIPLQTYD  182 (272)
T ss_dssp             HHHHTTCCCTTCEEEEECCSHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEG------GGCCCSCCS
T ss_pred             HHHHhCCCcCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccCCeEEeeH------HHhccCCCC
Confidence            34443322367899999999999999999988899999999998888777665653  1 12221      1232 4799


Q ss_pred             EEEEcCCCCCChH---HHHhccccCCeEEEEccCC
Q 018382          247 YIIDTVPANHPLE---PYLSLLKLDGKLILTGVIN  278 (357)
Q Consensus       247 ~v~d~~g~~~~~~---~~~~~l~~~G~~v~~g~~~  278 (357)
                      +++++++....-.   .....++++..++++...+
T Consensus       183 ivIn~t~~~~~~~~~~i~~~~l~~~~~v~D~~y~p  217 (272)
T 1p77_A          183 LVINATSAGLSGGTASVDAEILKLGSAFYDMQYAK  217 (272)
T ss_dssp             EEEECCCC-------CCCHHHHHHCSCEEESCCCT
T ss_pred             EEEECCCCCCCCCCCCCCHHHcCCCCEEEEeeCCC
Confidence            9999998762211   1123455666777765543

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=96.72  E-value=0.0013  Score=56.75  Aligned_cols=89  Identities=16%  Similarity=0.218  Sum_probs=58.4

Q ss_pred             CeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhh----CCccEEEEcCCCCC
Q 018382          182 LRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAA----DSLDYIIDTVPANH  256 (357)
Q Consensus       182 ~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~----~~~d~v~d~~g~~~  256 (357)
                      +++||+|+ |++|.++++.+...|++|+++++++++.+.       ....|..+.+.++++.    +++|++++++|...
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~-------~~~~Dl~~~~~v~~~~~~~~~~id~lv~~Ag~~~   74 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA-------DLSTAEGRKQAIADVLAKCSKGMDGLVLCAGLGP   74 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC-------CTTSHHHHHHHHHHHHTTCTTCCSEEEECCCCCT
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc-------ccccCCCCHHHHHHHHHHhCCCCCEEEECCCCCC
Confidence            46899987 999999999998899999999987654211       1112333333444433    46799999998652


Q ss_pred             ------------------ChHHHHhcccc--CCeEEEEccC
Q 018382          257 ------------------PLEPYLSLLKL--DGKLILTGVI  277 (357)
Q Consensus       257 ------------------~~~~~~~~l~~--~G~~v~~g~~  277 (357)
                                        ..+.+...|+.  .|+++.++..
T Consensus        75 ~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~  115 (257)
T 1fjh_A           75 QTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSV  115 (257)
T ss_dssp             TCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCG
T ss_pred             CcccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECCh
Confidence                              02334444433  3899988654

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=96.72  E-value=0.0045  Score=52.83  Aligned_cols=74  Identities=18%  Similarity=0.158  Sum_probs=52.0

Q ss_pred             CCeEEEEec-ChHHHHHHHHHHHcCCeEEEE-eCCcHHHHHHHHh---cCCc----EEEcCCChhHHHHh-------hCC
Q 018382          181 GLRGGILGL-GGVGHMGVLIAKAMGHHVTVI-SSSDKKRVEAMEH---LGAD----QYLVSSDATRMQEA-------ADS  244 (357)
Q Consensus       181 ~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~-~~~~~~~~~~~~~---~g~~----~vv~~~~~~~~~~~-------~~~  244 (357)
                      ++++||+|+ |++|.++++.+...|++|+++ .++.++.+.+.+.   .+..    ...|..+.+.+++.       .++
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGG   80 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCC
Confidence            357899987 999999999998899999998 7776665544332   2422    22366665444433       247


Q ss_pred             ccEEEEcCCC
Q 018382          245 LDYIIDTVPA  254 (357)
Q Consensus       245 ~d~v~d~~g~  254 (357)
                      +|++|+++|.
T Consensus        81 ~d~li~~Ag~   90 (245)
T 2ph3_A           81 LDTLVNNAGI   90 (245)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999885

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=96.71  E-value=0.002  Score=55.64  Aligned_cols=76  Identities=20%  Similarity=0.235  Sum_probs=52.6

Q ss_pred             CCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCc-------------------HHHHHHHHhcC----CcEE--EcCC
Q 018382          180 SGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSD-------------------KKRVEAMEHLG----ADQY--LVSS  233 (357)
Q Consensus       180 ~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~-------------------~~~~~~~~~~g----~~~v--v~~~  233 (357)
                      .+.+|+|+|+|++|..+++.+...|+ +++++++..                   .|.+.+.+.+.    ...+  ++..
T Consensus        30 ~~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~  109 (249)
T 1jw9_B           30 KDSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNAL  109 (249)
T ss_dssp             HHCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSC
T ss_pred             hCCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEecc
Confidence            35789999999999999999999998 888888776                   56555544332    1222  2211


Q ss_pred             -ChhHHHHhhCCccEEEEcCCCC
Q 018382          234 -DATRMQEAADSLDYIIDTVPAN  255 (357)
Q Consensus       234 -~~~~~~~~~~~~d~v~d~~g~~  255 (357)
                       +.+.+.+...++|+|+++++..
T Consensus       110 ~~~~~~~~~~~~~DvVi~~~d~~  132 (249)
T 1jw9_B          110 LDDAELAALIAEHDLVLDCTDNV  132 (249)
T ss_dssp             CCHHHHHHHHHTSSEEEECCSSH
T ss_pred             CCHhHHHHHHhCCCEEEEeCCCH
Confidence             1233444456899999999875

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=96.71  E-value=0.011  Score=52.49  Aligned_cols=75  Identities=24%  Similarity=0.285  Sum_probs=55.1

Q ss_pred             CCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCc-----HHHHHHHH--hcCCcEE-EcCCChhHHHHhhCCccEEEEc
Q 018382          181 GLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSD-----KKRVEAME--HLGADQY-LVSSDATRMQEAADSLDYIIDT  251 (357)
Q Consensus       181 ~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~-----~~~~~~~~--~~g~~~v-v~~~~~~~~~~~~~~~d~v~d~  251 (357)
                      ..+|||+|+ |.+|..+++.+...|.+|++++++.     ++.+.+.+  ..+...+ .|..+++.+.+...++|+||.+
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~   83 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVISA   83 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEEC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHhCCCEEEEC
Confidence            357999987 9999999999988899999999873     34333322  1344322 4666777777777899999999


Q ss_pred             CCCC
Q 018382          252 VPAN  255 (357)
Q Consensus       252 ~g~~  255 (357)
                      ++..
T Consensus        84 a~~~   87 (313)
T 1qyd_A           84 LAGG   87 (313)
T ss_dssp             CCCS
T ss_pred             Cccc
Confidence            8753

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=96.71  E-value=0.0041  Score=54.35  Aligned_cols=75  Identities=19%  Similarity=0.255  Sum_probs=51.9

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHH---hcCCcE---EEcCCChhHHHHhh-------CCc
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAME---HLGADQ---YLVSSDATRMQEAA-------DSL  245 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~---~~g~~~---vv~~~~~~~~~~~~-------~~~  245 (357)
                      .++++||+|+ |++|.+++..+...|++|+++++++++.+.+.+   ..+...   ..|..+.+.++++.       +.+
T Consensus        33 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i  112 (279)
T 3ctm_A           33 KGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDFGTI  112 (279)
T ss_dssp             TTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            5688999987 999999998888889999999988765443322   234321   23555554443332       369


Q ss_pred             cEEEEcCCC
Q 018382          246 DYIIDTVPA  254 (357)
Q Consensus       246 d~v~d~~g~  254 (357)
                      |++|+++|.
T Consensus       113 d~li~~Ag~  121 (279)
T 3ctm_A          113 DVFVANAGV  121 (279)
T ss_dssp             SEEEECGGG
T ss_pred             CEEEECCcc
Confidence            999998874

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=96.71  E-value=0.0035  Score=53.98  Aligned_cols=75  Identities=13%  Similarity=0.132  Sum_probs=49.2

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEE-eCCcHHHHHHHHh---cCCcE---EEcCCChhHHHHh----h-----
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVI-SSSDKKRVEAMEH---LGADQ---YLVSSDATRMQEA----A-----  242 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~-~~~~~~~~~~~~~---~g~~~---vv~~~~~~~~~~~----~-----  242 (357)
                      .++++||+|+ +++|.++++.+...|++|+++ .++.++.+...+.   .+...   ..|..+.+.++..    .     
T Consensus         6 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   85 (255)
T 3icc_A            6 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQN   85 (255)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHhcc
Confidence            5788999987 999999999999999999886 5555554433322   33221   1344444332222    1     


Q ss_pred             ----CCccEEEEcCCC
Q 018382          243 ----DSLDYIIDTVPA  254 (357)
Q Consensus       243 ----~~~d~v~d~~g~  254 (357)
                          ..+|++++++|.
T Consensus        86 ~~~~~~id~lv~nAg~  101 (255)
T 3icc_A           86 RTGSTKFDILINNAGI  101 (255)
T ss_dssp             HHSSSCEEEEEECCCC
T ss_pred             cccCCcccEEEECCCC
Confidence                139999999875

>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}

Probab=96.70  E-value=0.0028  Score=53.66  Aligned_cols=94  Identities=10%  Similarity=0.006  Sum_probs=66.9

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHh-hCCccEEEEcCCCCCC
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEA-ADSLDYIIDTVPANHP  257 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~-~~~~d~v~d~~g~~~~  257 (357)
                      .++.+||-+|+|. |..+..+++. +.+|+.++.++...+.+++......++..+-.+.+... .+.+|+|+........
T Consensus        47 ~~~~~vLDiGcG~-G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~~~~~~~  124 (226)
T 3m33_A           47 TPQTRVLEAGCGH-GPDAARFGPQ-AARWAAYDFSPELLKLARANAPHADVYEWNGKGELPAGLGAPFGLIVSRRGPTSV  124 (226)
T ss_dssp             CTTCEEEEESCTT-SHHHHHHGGG-SSEEEEEESCHHHHHHHHHHCTTSEEEECCSCSSCCTTCCCCEEEEEEESCCSGG
T ss_pred             CCCCeEEEeCCCC-CHHHHHHHHc-CCEEEEEECCHHHHHHHHHhCCCceEEEcchhhccCCcCCCCEEEEEeCCCHHHH
Confidence            6788999998853 6667777766 88999999999988888875443333322221111111 3579999987665557


Q ss_pred             hHHHHhccccCCeEEEE
Q 018382          258 LEPYLSLLKLDGKLILT  274 (357)
Q Consensus       258 ~~~~~~~l~~~G~~v~~  274 (357)
                      +..+.+.|+|+|+++..
T Consensus       125 l~~~~~~LkpgG~l~~~  141 (226)
T 3m33_A          125 ILRLPELAAPDAHFLYV  141 (226)
T ss_dssp             GGGHHHHEEEEEEEEEE
T ss_pred             HHHHHHHcCCCcEEEEe
Confidence            88899999999999944

>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*

Probab=96.69  E-value=0.003  Score=57.49  Aligned_cols=114  Identities=11%  Similarity=0.097  Sum_probs=75.2

Q ss_pred             hhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCC----cHH----HHHHHHhcCCcEEEcCCC
Q 018382          164 AGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSS----DKK----RVEAMEHLGADQYLVSSD  234 (357)
Q Consensus       164 ~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~----~~~----~~~~~~~~g~~~vv~~~~  234 (357)
                      .+...+.++...+.--++.+|+|+|+|..|..+++++...|+ +|++++++    .++    +...++.|..+.- ....
T Consensus       175 ~lAal~~A~~i~g~~l~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~-~~~~  253 (388)
T 1vl6_A          175 VSAAFLNALKLTEKKIEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKGILNENDPETCLNEYHLEIARITN-PERL  253 (388)
T ss_dssp             HHHHHHHHHHHHTCCTTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSC-TTCC
T ss_pred             HHHHHHHHHHHhCCCCCCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCcccCCCcccccCHHHHHHHHhhh-ccCc
Confidence            334445555555532467899999999999999999999999 89999987    544    2222332331100 0112


Q ss_pred             hhHHHHhhCCccEEEEcCCCCCChHHHHhccccCCeEEEEccCC
Q 018382          235 ATRMQEAADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVIN  278 (357)
Q Consensus       235 ~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~  278 (357)
                      ...+++...++|++|-+++..-..+..++.|+++-.++.+.++.
T Consensus       254 ~~~L~eav~~ADVlIG~Sap~l~t~emVk~Ma~~pIIfalSNPt  297 (388)
T 1vl6_A          254 SGDLETALEGADFFIGVSRGNILKPEWIKKMSRKPVIFALANPV  297 (388)
T ss_dssp             CSCHHHHHTTCSEEEECSCSSCSCHHHHTTSCSSCEEEECCSSS
T ss_pred             hhhHHHHHccCCEEEEeCCCCccCHHHHHhcCCCCEEEEcCCCC
Confidence            23355566678999998885434467888899877777776654

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=96.69  E-value=0.0026  Score=55.00  Aligned_cols=72  Identities=15%  Similarity=0.191  Sum_probs=50.5

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcE---EEcCCChhHHHHhh------CCccEEE
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQ---YLVSSDATRMQEAA------DSLDYII  249 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~~------~~~d~v~  249 (357)
                      .++++||+|+ +++|.++++.+...|++|++++++.++.  ..+ ++...   ..|..+.+.++++.      +++|+++
T Consensus         8 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~--~~~-~~~~~~~~~~D~~~~~~v~~~~~~~~~~g~id~lv   84 (257)
T 3tl3_A            8 RDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDV--VAD-LGDRARFAAADVTDEAAVASALDLAETMGTLRIVV   84 (257)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHH--HHH-TCTTEEEEECCTTCHHHHHHHHHHHHHHSCEEEEE
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHH--HHh-cCCceEEEECCCCCHHHHHHHHHHHHHhCCCCEEE
Confidence            4688999987 9999999998888899999999865443  223 55322   24556654433332      4899999


Q ss_pred             EcCCC
Q 018382          250 DTVPA  254 (357)
Q Consensus       250 d~~g~  254 (357)
                      +++|.
T Consensus        85 ~nAg~   89 (257)
T 3tl3_A           85 NCAGT   89 (257)
T ss_dssp             ECGGG
T ss_pred             ECCCC
Confidence            99984

>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}

Probab=96.69  E-value=0.0054  Score=55.61  Aligned_cols=88  Identities=19%  Similarity=0.217  Sum_probs=65.3

Q ss_pred             CCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCC---
Q 018382          180 SGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANH---  256 (357)
Q Consensus       180 ~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~---  256 (357)
                      .|++|.|+|.|.+|..+++.++..|++|++.+++. +.+.+.+ .|...+      +.++++....|+|+.++....   
T Consensus       159 ~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~-~~~~~~~-~g~~~~------~~l~ell~~aDiV~l~~Plt~~t~  230 (352)
T 3gg9_A          159 KGQTLGIFGYGKIGQLVAGYGRAFGMNVLVWGREN-SKERARA-DGFAVA------ESKDALFEQSDVLSVHLRLNDETR  230 (352)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSHH-HHHHHHH-TTCEEC------SSHHHHHHHCSEEEECCCCSTTTT
T ss_pred             CCCEEEEEeECHHHHHHHHHHHhCCCEEEEECCCC-CHHHHHh-cCceEe------CCHHHHHhhCCEEEEeccCcHHHH
Confidence            57899999999999999999999999999998874 3334444 676421      123344456899998875431   


Q ss_pred             -Ch-HHHHhccccCCeEEEEc
Q 018382          257 -PL-EPYLSLLKLDGKLILTG  275 (357)
Q Consensus       257 -~~-~~~~~~l~~~G~~v~~g  275 (357)
                       .+ ...++.|+++..++.++
T Consensus       231 ~li~~~~l~~mk~gailIN~a  251 (352)
T 3gg9_A          231 SIITVADLTRMKPTALFVNTS  251 (352)
T ss_dssp             TCBCHHHHTTSCTTCEEEECS
T ss_pred             HhhCHHHHhhCCCCcEEEECC
Confidence             22 36778899999999886

>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2

Probab=96.68  E-value=0.005  Score=53.65  Aligned_cols=97  Identities=18%  Similarity=0.189  Sum_probs=71.7

Q ss_pred             ccccchhhhhhhhhhccCCCCCCCeEEEEecC-hHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhH
Q 018382          159 APLLCAGVTVFSPLSHFGLKQSGLRGGILGLG-GVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATR  237 (357)
Q Consensus       159 a~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g-~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~  237 (357)
                      +.+||........|++...--.|++|+|+|.| .+|.-+++++...|++|++..+...                     .
T Consensus       137 ~~~PcTp~gi~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~---------------------~  195 (288)
T 1b0a_A          137 RLRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTK---------------------N  195 (288)
T ss_dssp             SSCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCS---------------------C
T ss_pred             CCCCCcHHHHHHHHHHcCCCCCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCch---------------------h
Confidence            45677666666667766654689999999987 5899999999999999999864431                     1


Q ss_pred             HHHhhCCccEEEEcCCCCCChHHHHhccccCCeEEEEccCC
Q 018382          238 MQEAADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVIN  278 (357)
Q Consensus       238 ~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~  278 (357)
                      +++....+|+||.++|.+..+  -.+.++++..++++|...
T Consensus       196 L~~~~~~ADIVI~Avg~p~lI--~~~~vk~GavVIDVgi~r  234 (288)
T 1b0a_A          196 LRHHVENADLLIVAVGKPGFI--PGDWIKEGAIVIDVGINR  234 (288)
T ss_dssp             HHHHHHHCSEEEECSCCTTCB--CTTTSCTTCEEEECCCEE
T ss_pred             HHHHhccCCEEEECCCCcCcC--CHHHcCCCcEEEEccCCc
Confidence            233444689999999987443  334578888899998653

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=96.67  E-value=0.0057  Score=53.57  Aligned_cols=77  Identities=12%  Similarity=0.107  Sum_probs=54.7

Q ss_pred             CCCCeEEEEec-C--hHHHHHHHHHHHcCCeEEEEeCCc--HHHHHHHHhcCCcEE--EcCCChhHHHHhh-------CC
Q 018382          179 QSGLRGGILGL-G--GVGHMGVLIAKAMGHHVTVISSSD--KKRVEAMEHLGADQY--LVSSDATRMQEAA-------DS  244 (357)
Q Consensus       179 ~~~~~VlI~G~-g--~~G~~ai~la~~~g~~V~~~~~~~--~~~~~~~~~~g~~~v--v~~~~~~~~~~~~-------~~  244 (357)
                      -.++++||+|+ |  ++|.++++.+...|++|+++++++  +..+.+.+..+....  .|..+.+.++++.       +.
T Consensus        24 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~  103 (280)
T 3nrc_A           24 LAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKVWDG  103 (280)
T ss_dssp             TTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHHCSS
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHHcCC
Confidence            35789999984 4  499999999988999999999887  555666554553332  4555554433322       37


Q ss_pred             ccEEEEcCCCC
Q 018382          245 LDYIIDTVPAN  255 (357)
Q Consensus       245 ~d~v~d~~g~~  255 (357)
                      +|++++++|..
T Consensus       104 id~li~nAg~~  114 (280)
T 3nrc_A          104 LDAIVHSIAFA  114 (280)
T ss_dssp             CCEEEECCCCC
T ss_pred             CCEEEECCccC
Confidence            99999999853

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=96.67  E-value=0.0034  Score=55.46  Aligned_cols=75  Identities=13%  Similarity=0.018  Sum_probs=53.3

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEe-CCcHHHHHHHHh----cCCcE---EEcCCChh--------------
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVIS-SSDKKRVEAMEH----LGADQ---YLVSSDAT--------------  236 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~-~~~~~~~~~~~~----~g~~~---vv~~~~~~--------------  236 (357)
                      .++++||+|+ |++|.++++.+...|++|++++ +++++.+.+.+.    .|...   ..|..+.+              
T Consensus         8 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   87 (291)
T 1e7w_A            8 TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVT   87 (291)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCcccccccccccccccc
Confidence            4678999987 9999999999999999999999 887766554432    34321   23444444              


Q ss_pred             ---HHHHhh-------CCccEEEEcCCC
Q 018382          237 ---RMQEAA-------DSLDYIIDTVPA  254 (357)
Q Consensus       237 ---~~~~~~-------~~~d~v~d~~g~  254 (357)
                         .++++.       +++|++|+++|.
T Consensus        88 ~~~~v~~~~~~~~~~~g~iD~lvnnAg~  115 (291)
T 1e7w_A           88 LFTRCAELVAACYTHWGRCDVLVNNASS  115 (291)
T ss_dssp             HHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred             hHHHHHHHHHHHHHhcCCCCEEEECCCC
Confidence               333322       379999999975

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=96.67  E-value=0.0056  Score=54.26  Aligned_cols=76  Identities=21%  Similarity=0.245  Sum_probs=52.7

Q ss_pred             CCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCC------------cHHHHHHHH---hcCCcE---EEcCCChhHHH
Q 018382          179 QSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSS------------DKKRVEAME---HLGADQ---YLVSSDATRMQ  239 (357)
Q Consensus       179 ~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~------------~~~~~~~~~---~~g~~~---vv~~~~~~~~~  239 (357)
                      -.++++||+|+ +++|.++++.+...|++|++++++            .++.+...+   ..|...   ..|..+.+.++
T Consensus        26 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~  105 (299)
T 3t7c_A           26 VEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQ  105 (299)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHH
Confidence            35789999987 999999999999999999999876            444333322   245332   24566654433


Q ss_pred             Hhh-------CCccEEEEcCCC
Q 018382          240 EAA-------DSLDYIIDTVPA  254 (357)
Q Consensus       240 ~~~-------~~~d~v~d~~g~  254 (357)
                      ++.       +++|++++++|.
T Consensus       106 ~~~~~~~~~~g~iD~lv~nAg~  127 (299)
T 3t7c_A          106 AAVDDGVTQLGRLDIVLANAAL  127 (299)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCC
T ss_pred             HHHHHHHHHhCCCCEEEECCCC
Confidence            332       379999999874

>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A

Probab=96.66  E-value=0.0052  Score=53.33  Aligned_cols=97  Identities=20%  Similarity=0.293  Sum_probs=71.6

Q ss_pred             ccccchhhhhhhhhhccCCCCCCCeEEEEecC-hHHHHHHHHHHHc--CCeEEEEeCCcHHHHHHHHhcCCcEEEcCCCh
Q 018382          159 APLLCAGVTVFSPLSHFGLKQSGLRGGILGLG-GVGHMGVLIAKAM--GHHVTVISSSDKKRVEAMEHLGADQYLVSSDA  235 (357)
Q Consensus       159 a~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g-~~G~~ai~la~~~--g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~  235 (357)
                      ..+||....+...+++.+.--.|++++|+|.| .+|..+++++...  |++|++..+..                     
T Consensus       136 ~~~PcTp~gi~~ll~~~~i~l~gk~vvVvG~s~iVG~p~A~lL~~~g~~atVtv~h~~t---------------------  194 (281)
T 2c2x_A          136 APLPCTPRGIVHLLRRYDISIAGAHVVVIGRGVTVGRPLGLLLTRRSENATVTLCHTGT---------------------  194 (281)
T ss_dssp             CCCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHTSTTTCCEEEEECTTC---------------------
T ss_pred             CCCCChHHHHHHHHHHcCCCCCCCEEEEECCCcHHHHHHHHHHhcCCCCCEEEEEECch---------------------
Confidence            45676666666667766643689999999997 5799999999998  89999875432                     


Q ss_pred             hHHHHhhCCccEEEEcCCCCCChHHHHhccccCCeEEEEccCC
Q 018382          236 TRMQEAADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVIN  278 (357)
Q Consensus       236 ~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~  278 (357)
                      ..+.+....+|+||.++|.+..  .-.+.++++-.++++|...
T Consensus       195 ~~L~~~~~~ADIVI~Avg~p~~--I~~~~vk~GavVIDVgi~r  235 (281)
T 2c2x_A          195 RDLPALTRQADIVVAAVGVAHL--LTADMVRPGAAVIDVGVSR  235 (281)
T ss_dssp             SCHHHHHTTCSEEEECSCCTTC--BCGGGSCTTCEEEECCEEE
T ss_pred             hHHHHHHhhCCEEEECCCCCcc--cCHHHcCCCcEEEEccCCC
Confidence            1234455679999999998844  3345578888888887753

>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A

Probab=96.66  E-value=0.0056  Score=56.30  Aligned_cols=89  Identities=15%  Similarity=0.166  Sum_probs=67.3

Q ss_pred             CCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCC----
Q 018382          180 SGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPAN----  255 (357)
Q Consensus       180 ~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~----  255 (357)
                      .|++|.|+|.|.+|..+++.++.+|.+|++..++..+.+...+ +|+...   .   .++++....|+|+.++...    
T Consensus       190 ~gktvGIIGlG~IG~~vA~~l~a~G~~V~~~d~~~~~~~~~~~-~G~~~~---~---~l~ell~~aDvV~l~~Plt~~t~  262 (393)
T 2nac_A          190 EAMHVGTVAAGRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKE-LNLTWH---A---TREDMYPVCDVVTLNCPLHPETE  262 (393)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHH-HTCEEC---S---SHHHHGGGCSEEEECSCCCTTTT
T ss_pred             CCCEEEEEeECHHHHHHHHHHHhCCCEEEEEcCCccchhhHhh-cCceec---C---CHHHHHhcCCEEEEecCCchHHH
Confidence            5789999999999999999999999999999887655555555 676431   1   2345666899999887642    


Q ss_pred             CCh-HHHHhccccCCeEEEEc
Q 018382          256 HPL-EPYLSLLKLDGKLILTG  275 (357)
Q Consensus       256 ~~~-~~~~~~l~~~G~~v~~g  275 (357)
                      ..+ ...++.|+++..++.++
T Consensus       263 ~li~~~~l~~mk~gailIN~a  283 (393)
T 2nac_A          263 HMINDETLKLFKRGAYIVNTA  283 (393)
T ss_dssp             TCBSHHHHTTSCTTEEEEECS
T ss_pred             HHhhHHHHhhCCCCCEEEECC
Confidence            233 45778899988888875

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=96.65  E-value=0.0065  Score=53.40  Aligned_cols=74  Identities=22%  Similarity=0.199  Sum_probs=52.5

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHH-----------HHHHHHhcCCcE---EEcCCChhHHHHhh--
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKK-----------RVEAMEHLGADQ---YLVSSDATRMQEAA--  242 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~-----------~~~~~~~~g~~~---vv~~~~~~~~~~~~--  242 (357)
                      .++++||+|+ +++|.++++.+...|++|+++++++++           .+.+.+ .+...   ..|..+.+.++++.  
T Consensus         8 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~   86 (285)
T 3sc4_A            8 RGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEE-AGGQALPIVGDIRDGDAVAAAVAK   86 (285)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHH-HTSEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHh-cCCcEEEEECCCCCHHHHHHHHHH
Confidence            5789999987 999999999998889999999988752           222233 45322   23666654433332  


Q ss_pred             -----CCccEEEEcCCC
Q 018382          243 -----DSLDYIIDTVPA  254 (357)
Q Consensus       243 -----~~~d~v~d~~g~  254 (357)
                           +++|++++++|.
T Consensus        87 ~~~~~g~id~lvnnAg~  103 (285)
T 3sc4_A           87 TVEQFGGIDICVNNASA  103 (285)
T ss_dssp             HHHHHSCCSEEEECCCC
T ss_pred             HHHHcCCCCEEEECCCC
Confidence                 379999999885

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=96.64  E-value=0.0035  Score=56.41  Aligned_cols=75  Identities=13%  Similarity=0.018  Sum_probs=53.4

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEe-CCcHHHHHHHHh----cCCcE---EEcCCChh--------------
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVIS-SSDKKRVEAMEH----LGADQ---YLVSSDAT--------------  236 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~-~~~~~~~~~~~~----~g~~~---vv~~~~~~--------------  236 (357)
                      .++++||+|+ |++|.++++.+...|++|++++ +++++.+.+.+.    .|...   ..|..+.+              
T Consensus        45 ~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~  124 (328)
T 2qhx_A           45 TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVT  124 (328)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------CCBC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhccccccccccccc
Confidence            4678999987 9999999999999999999999 887776555432    34221   23444444              


Q ss_pred             ---HHHHhh-------CCccEEEEcCCC
Q 018382          237 ---RMQEAA-------DSLDYIIDTVPA  254 (357)
Q Consensus       237 ---~~~~~~-------~~~d~v~d~~g~  254 (357)
                         .++++.       +++|++|+++|.
T Consensus       125 ~~~~v~~~~~~~~~~~g~iD~lVnnAG~  152 (328)
T 2qhx_A          125 LFTRCAELVAACYTHWGRCDVLVNNASS  152 (328)
T ss_dssp             HHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred             cHHHHHHHHHHHHHhcCCCCEEEECCCC
Confidence               333322       379999999975

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=96.63  E-value=0.0045  Score=53.95  Aligned_cols=75  Identities=19%  Similarity=0.205  Sum_probs=51.2

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcH-HHHHHHH---hcCCcE---EEcCCChhHHHHh-------hCC
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDK-KRVEAME---HLGADQ---YLVSSDATRMQEA-------ADS  244 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~-~~~~~~~---~~g~~~---vv~~~~~~~~~~~-------~~~  244 (357)
                      .++++||+|+ |++|.++++.+...|++|++++++.. ..+.+.+   ..+...   ..|..+.+.+.++       .++
T Consensus        28 ~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~  107 (271)
T 4iin_A           28 TGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQSDGG  107 (271)
T ss_dssp             SCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            5788999987 99999999999889999999998543 3333222   234322   2355554433332       237


Q ss_pred             ccEEEEcCCC
Q 018382          245 LDYIIDTVPA  254 (357)
Q Consensus       245 ~d~v~d~~g~  254 (357)
                      +|++++++|.
T Consensus       108 id~li~nAg~  117 (271)
T 4iin_A          108 LSYLVNNAGV  117 (271)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCc
Confidence            9999999986

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=96.62  E-value=0.0015  Score=56.42  Aligned_cols=91  Identities=12%  Similarity=0.061  Sum_probs=61.8

Q ss_pred             CCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCC--
Q 018382          180 SGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANH--  256 (357)
Q Consensus       180 ~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~--  256 (357)
                      ++ +++|+|+|++|.+++..+...|+ +|++..|+.++.+.+.+.++.   ...   +.+.+....+|+||+++....  
T Consensus       108 ~~-~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~~~~~---~~~---~~~~~~~~~aDiVInatp~gm~p  180 (253)
T 3u62_A          108 KE-PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTIERAKALDFPVKI---FSL---DQLDEVVKKAKSLFNTTSVGMKG  180 (253)
T ss_dssp             CS-SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCSSCEE---EEG---GGHHHHHHTCSEEEECSSTTTTS
T ss_pred             CC-eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHccc---CCH---HHHHhhhcCCCEEEECCCCCCCC
Confidence            56 99999999999999999999999 999999998887665554442   222   123344457999999885420  


Q ss_pred             -ChHHHHhccccCCeEEEEccC
Q 018382          257 -PLEPYLSLLKLDGKLILTGVI  277 (357)
Q Consensus       257 -~~~~~~~~l~~~G~~v~~g~~  277 (357)
                       ........++++..++++...
T Consensus       181 ~~~~i~~~~l~~~~~V~Divy~  202 (253)
T 3u62_A          181 EELPVSDDSLKNLSLVYDVIYF  202 (253)
T ss_dssp             CCCSCCHHHHTTCSEEEECSSS
T ss_pred             CCCCCCHHHhCcCCEEEEeeCC
Confidence             001113446677777776443

>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*

Probab=96.61  E-value=0.006  Score=52.64  Aligned_cols=97  Identities=18%  Similarity=0.145  Sum_probs=66.8

Q ss_pred             CCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCC---cEEEcCCChhHHHHhhCCccEEEEcCCC
Q 018382          178 KQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGA---DQYLVSSDATRMQEAADSLDYIIDTVPA  254 (357)
Q Consensus       178 ~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~---~~vv~~~~~~~~~~~~~~~d~v~d~~g~  254 (357)
                      ++++.+||-+|+| .|..+..+++..+.+|++++.+++..+.+++....   ..++..+-.+ .....+.+|+|+....-
T Consensus        53 ~~~~~~vLdiG~G-~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~-~~~~~~~fD~v~~~~~l  130 (266)
T 3ujc_A           53 LNENSKVLDIGSG-LGGGCMYINEKYGAHTHGIDICSNIVNMANERVSGNNKIIFEANDILT-KEFPENNFDLIYSRDAI  130 (266)
T ss_dssp             CCTTCEEEEETCT-TSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTT-CCCCTTCEEEEEEESCG
T ss_pred             CCCCCEEEEECCC-CCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhcCCCeEEEECcccc-CCCCCCcEEEEeHHHHH
Confidence            4789999999987 67888888887789999999999988888884432   1222111111 11113479999875432


Q ss_pred             CC--------ChHHHHhccccCCeEEEEcc
Q 018382          255 NH--------PLEPYLSLLKLDGKLILTGV  276 (357)
Q Consensus       255 ~~--------~~~~~~~~l~~~G~~v~~g~  276 (357)
                      ..        .+..+.+.|+|+|.++....
T Consensus       131 ~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~  160 (266)
T 3ujc_A          131 LALSLENKNKLFQKCYKWLKPTGTLLITDY  160 (266)
T ss_dssp             GGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             HhcChHHHHHHHHHHHHHcCCCCEEEEEEe
Confidence            21        25678889999999987654

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=96.61  E-value=0.0058  Score=54.74  Aligned_cols=75  Identities=17%  Similarity=0.187  Sum_probs=52.1

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEe---------CCcHHHHHHHHh---cCCcEEEcCCChhHHH----Hh-
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVIS---------SSDKKRVEAMEH---LGADQYLVSSDATRMQ----EA-  241 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~---------~~~~~~~~~~~~---~g~~~vv~~~~~~~~~----~~-  241 (357)
                      .++++||+|+ |++|.++++.+...|++|++.+         ++.++.+.+.+.   .+...+.|..+.+.++    ++ 
T Consensus         8 ~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~~~D~~~~~~~~~~~~~~~   87 (319)
T 1gz6_A            8 DGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTAL   87 (319)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeEEEeCCCHHHHHHHHHHHH
Confidence            5788999987 9999999999988999999964         345554433322   3444456666654322    22 


Q ss_pred             --hCCccEEEEcCCC
Q 018382          242 --ADSLDYIIDTVPA  254 (357)
Q Consensus       242 --~~~~d~v~d~~g~  254 (357)
                        .+++|++|+++|.
T Consensus        88 ~~~g~iD~lVnnAG~  102 (319)
T 1gz6_A           88 DTFGRIDVVVNNAGI  102 (319)
T ss_dssp             HHTSCCCEEEECCCC
T ss_pred             HHcCCCCEEEECCCC
Confidence              2479999999984

>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}

Probab=96.61  E-value=0.0032  Score=51.86  Aligned_cols=96  Identities=14%  Similarity=0.089  Sum_probs=64.0

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcC--CeEEEEeCCcHHHHHHHHhc---CC---cEEEcCCChhHHHHhhCCccEEEE
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMG--HHVTVISSSDKKRVEAMEHL---GA---DQYLVSSDATRMQEAADSLDYIID  250 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g--~~V~~~~~~~~~~~~~~~~~---g~---~~vv~~~~~~~~~~~~~~~d~v~d  250 (357)
                      +++++||-+|+|. |..++.+++..+  .+|++++.+++..+.+++.+   |.   -.++..+-.+......+.+|+|+.
T Consensus        21 ~~~~~vLDlGcG~-G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~   99 (197)
T 3eey_A           21 KEGDTVVDATCGN-GNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVMF   99 (197)
T ss_dssp             CTTCEEEESCCTT-SHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEEE
T ss_pred             CCCCEEEEcCCCC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEEE
Confidence            7889999999865 777888888764  59999999988777666532   32   223322211221122357999986


Q ss_pred             cCCC---------------CCChHHHHhccccCCeEEEEc
Q 018382          251 TVPA---------------NHPLEPYLSLLKLDGKLILTG  275 (357)
Q Consensus       251 ~~g~---------------~~~~~~~~~~l~~~G~~v~~g  275 (357)
                      ..+-               ...+..+.+.|+++|+++...
T Consensus       100 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~  139 (197)
T 3eey_A          100 NLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVI  139 (197)
T ss_dssp             EESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             cCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEE
Confidence            5422               125677889999999998764

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=96.60  E-value=0.0061  Score=52.68  Aligned_cols=75  Identities=19%  Similarity=0.144  Sum_probs=51.4

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHH----HHHhcCCc---EEEcCCChhHHHHhh-------CC
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVE----AMEHLGAD---QYLVSSDATRMQEAA-------DS  244 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~----~~~~~g~~---~vv~~~~~~~~~~~~-------~~  244 (357)
                      .++++||+|+ |++|.++++.+...|++|++++++.++...    +.+..+..   ...|..+.+.++++.       +.
T Consensus        13 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   92 (265)
T 1h5q_A           13 VNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGP   92 (265)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence            4678999987 999999999998899999999986544332    22223432   223555654433322       36


Q ss_pred             ccEEEEcCCC
Q 018382          245 LDYIIDTVPA  254 (357)
Q Consensus       245 ~d~v~d~~g~  254 (357)
                      +|++++++|.
T Consensus        93 id~li~~Ag~  102 (265)
T 1h5q_A           93 ISGLIANAGV  102 (265)
T ss_dssp             EEEEEECCCC
T ss_pred             CCEEEECCCc
Confidence            9999999885

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=96.59  E-value=0.001  Score=56.22  Aligned_cols=94  Identities=16%  Similarity=0.088  Sum_probs=64.1

Q ss_pred             CeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcE-EEcCCChhHHHHhhCCccEEEEcCCCCC---
Q 018382          182 LRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQ-YLVSSDATRMQEAADSLDYIIDTVPANH---  256 (357)
Q Consensus       182 ~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~~~~d~v~d~~g~~~---  256 (357)
                      .+|||+|+ |.+|..+++.+...|.+|+++++++++...+.  -+... ..|..+.+.+.+...++|+||.+++...   
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~~~   82 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIEN--EHLKVKKADVSSLDEVCEVCKGADAVISAFNPGWNNP   82 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCCC--TTEEEECCCTTCHHHHHHHHTTCSEEEECCCC-----
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhcc--CceEEEEecCCCHHHHHHHhcCCCEEEEeCcCCCCCh
Confidence            57999987 99999999999999999999999876643221  12221 2355666777777779999999987641   


Q ss_pred             --------ChHHHHhccccC--CeEEEEccC
Q 018382          257 --------PLEPYLSLLKLD--GKLILTGVI  277 (357)
Q Consensus       257 --------~~~~~~~~l~~~--G~~v~~g~~  277 (357)
                              ....+++.++..  .+++.++..
T Consensus        83 ~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~  113 (227)
T 3dhn_A           83 DIYDETIKVYLTIIDGVKKAGVNRFLMVGGA  113 (227)
T ss_dssp             -CCSHHHHHHHHHHHHHHHTTCSEEEEECCS
T ss_pred             hHHHHHHHHHHHHHHHHHHhCCCEEEEeCCh
Confidence                    122334444443  378887654

>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}

Probab=96.59  E-value=0.02  Score=51.64  Aligned_cols=134  Identities=13%  Similarity=0.146  Sum_probs=82.2

Q ss_pred             CeEEEEecChHHHHHHHHHH-Hc-CCeEEE-EeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhh--CCccEEEEcCCCCC
Q 018382          182 LRGGILGLGGVGHMGVLIAK-AM-GHHVTV-ISSSDKKRVEAMEHLGADQYLVSSDATRMQEAA--DSLDYIIDTVPANH  256 (357)
Q Consensus       182 ~~VlI~G~g~~G~~ai~la~-~~-g~~V~~-~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~--~~~d~v~d~~g~~~  256 (357)
                      -+|.|+|+|.+|...++.++ .. ++++++ .++++++.+.+.+++|...+++  +   .+++.  ..+|+|+.|++...
T Consensus         9 ~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~~~g~~~~~~--~---~~~~l~~~~~D~V~i~tp~~~   83 (346)
T 3cea_A            9 LRAAIIGLGRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNELGVETTYT--N---YKDMIDTENIDAIFIVAPTPF   83 (346)
T ss_dssp             EEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHHTTCCSEEES--C---HHHHHTTSCCSEEEECSCGGG
T ss_pred             ceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHhCCCcccC--C---HHHHhcCCCCCEEEEeCChHh
Confidence            47899999999998888876 43 667654 4666667766666688755542  2   22332  27999999998875


Q ss_pred             ChHHHHhccccCCeEEEEccCCCCcccc---hHHHh-hc-cceEEEEeecCH-HHHHHHHHHHHhcCCCcc
Q 018382          257 PLEPYLSLLKLDGKLILTGVINTPMQFL---TPMVM-LG-RKAITGSFIGSM-KETKEMLEFCREKGVTSM  321 (357)
Q Consensus       257 ~~~~~~~~l~~~G~~v~~g~~~~~~~~~---~~~~~-~~-~~~i~g~~~~~~-~~~~~~~~~~~~~~l~~~  321 (357)
                      ....+..+++.+ +-|.+.-+.....-.   +.... .+ +..+......+. ..++.+.+++.+|.+-.+
T Consensus        84 h~~~~~~al~~G-~~v~~eKp~~~~~~~~~~l~~~a~~~~~~~~~~~~~~r~~p~~~~~~~~i~~g~iG~i  153 (346)
T 3cea_A           84 HPEMTIYAMNAG-LNVFCEKPLGLDFNEVDEMAKVIKSHPNQIFQSGFMRRYDDSYRYAKKIVDNGDIGKI  153 (346)
T ss_dssp             HHHHHHHHHHTT-CEEEECSCCCSCHHHHHHHHHHHHTCTTSCEECCCGGGTCHHHHHHHHHHHTTTTCSE
T ss_pred             HHHHHHHHHHCC-CEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEecccccCHHHHHHHHHHHcCCCCCe
Confidence            566777777765 545554322111111   11221 23 444433333222 457888889999887653

>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*

Probab=96.59  E-value=0.0094  Score=52.73  Aligned_cols=96  Identities=14%  Similarity=0.154  Sum_probs=67.3

Q ss_pred             CCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc---CCc---EEEcCCChhHHHHhhCCccEEEE
Q 018382          177 LKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL---GAD---QYLVSSDATRMQEAADSLDYIID  250 (357)
Q Consensus       177 ~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~---g~~---~vv~~~~~~~~~~~~~~~d~v~d  250 (357)
                      .++++++||-+|+|. |..+..+++..|++|++++.+++..+.+++..   |..   .++.. +..   ++.+.+|+|+.
T Consensus        69 ~~~~~~~vLDiGcG~-G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~-d~~---~~~~~fD~v~~  143 (302)
T 3hem_A           69 NLEPGMTLLDIGCGW-GSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQ-GWE---EFDEPVDRIVS  143 (302)
T ss_dssp             CCCTTCEEEEETCTT-SHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEEC-CGG---GCCCCCSEEEE
T ss_pred             CCCCcCEEEEeeccC-cHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEC-CHH---HcCCCccEEEE
Confidence            348999999999874 88888999988899999999988777666532   321   12222 211   22568999986


Q ss_pred             cCCCC---------------CChHHHHhccccCCeEEEEccC
Q 018382          251 TVPAN---------------HPLEPYLSLLKLDGKLILTGVI  277 (357)
Q Consensus       251 ~~g~~---------------~~~~~~~~~l~~~G~~v~~g~~  277 (357)
                      ...-.               ..+..+.+.|+|+|+++.....
T Consensus       144 ~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~  185 (302)
T 3hem_A          144 LGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTIT  185 (302)
T ss_dssp             ESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEE
T ss_pred             cchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence            43211               2466788899999999876554

>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}

Probab=96.59  E-value=0.0019  Score=53.71  Aligned_cols=133  Identities=18%  Similarity=0.259  Sum_probs=76.2

Q ss_pred             cceEEE-eeCcceEECCCCCCccccccccchhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeC
Q 018382          135 FAESMV-VDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISS  212 (357)
Q Consensus       135 ~~~~~~-v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~  212 (357)
                      |.+|.. .+....+.+++.+++..+.. +.. ......+...  +.++++||-+|+|. |..+..+++. +. +|++++.
T Consensus        18 w~~~~~~~~~~~~~~~~~~~~f~~~~~-~~~-~~~~~~l~~~--~~~~~~vLDiG~G~-G~~~~~l~~~-~~~~v~~vD~   91 (205)
T 3grz_A           18 WEDYQPVFKDQEIIRLDPGLAFGTGNH-QTT-QLAMLGIERA--MVKPLTVADVGTGS-GILAIAAHKL-GAKSVLATDI   91 (205)
T ss_dssp             TCCCCCSSTTCEEEEESCC-----CCH-HHH-HHHHHHHHHH--CSSCCEEEEETCTT-SHHHHHHHHT-TCSEEEEEES
T ss_pred             ccccccCCCCceeEEecCCcccCCCCC-ccH-HHHHHHHHHh--ccCCCEEEEECCCC-CHHHHHHHHC-CCCEEEEEEC
Confidence            455555 56677788888777666431 111 1111112211  36789999999865 6666777664 55 9999999


Q ss_pred             CcHHHHHHHHh---cCCc--EEEcCCChhHHHHhhCCccEEEEcCCCC---CChHHHHhccccCCeEEEEcc
Q 018382          213 SDKKRVEAMEH---LGAD--QYLVSSDATRMQEAADSLDYIIDTVPAN---HPLEPYLSLLKLDGKLILTGV  276 (357)
Q Consensus       213 ~~~~~~~~~~~---~g~~--~vv~~~~~~~~~~~~~~~d~v~d~~g~~---~~~~~~~~~l~~~G~~v~~g~  276 (357)
                      ++...+.+++.   .+..  .++..+-   .....+.+|+|+......   ..+..+.+.|+++|+++....
T Consensus        92 s~~~~~~a~~~~~~~~~~~v~~~~~d~---~~~~~~~fD~i~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~  160 (205)
T 3grz_A           92 SDESMTAAEENAALNGIYDIALQKTSL---LADVDGKFDLIVANILAEILLDLIPQLDSHLNEDGQVIFSGI  160 (205)
T ss_dssp             CHHHHHHHHHHHHHTTCCCCEEEESST---TTTCCSCEEEEEEESCHHHHHHHGGGSGGGEEEEEEEEEEEE
T ss_pred             CHHHHHHHHHHHHHcCCCceEEEeccc---cccCCCCceEEEECCcHHHHHHHHHHHHHhcCCCCEEEEEec
Confidence            98877766653   2432  2222221   112335899998654332   124556678999999887543

>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}

Probab=96.58  E-value=0.0071  Score=51.56  Aligned_cols=95  Identities=20%  Similarity=0.143  Sum_probs=66.1

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHc--CCeEEEEeCCcHHHHHHHHhc---CCc---EEEcCCChhHHHHh---------
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAM--GHHVTVISSSDKKRVEAMEHL---GAD---QYLVSSDATRMQEA---------  241 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~--g~~V~~~~~~~~~~~~~~~~~---g~~---~vv~~~~~~~~~~~---------  241 (357)
                      .++++||-+|+| .|..++.+++..  +.+|+.++.+++..+.+++.+   |..   .++..+..+.+...         
T Consensus        59 ~~~~~VLdiG~G-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~  137 (239)
T 2hnk_A           59 SGAKRIIEIGTF-TGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSW  137 (239)
T ss_dssp             HTCSEEEEECCT-TCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGG
T ss_pred             hCcCEEEEEeCC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhcccccc
Confidence            578899999987 588888999887  569999999988777666643   432   22222222333333         


Q ss_pred             ------h-CCccEEEEcCCCC---CChHHHHhccccCCeEEEE
Q 018382          242 ------A-DSLDYIIDTVPAN---HPLEPYLSLLKLDGKLILT  274 (357)
Q Consensus       242 ------~-~~~d~v~d~~g~~---~~~~~~~~~l~~~G~~v~~  274 (357)
                            . +.+|+||......   ..+..+.+.|+++|.++..
T Consensus       138 ~~~f~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~  180 (239)
T 2hnk_A          138 ASDFAFGPSSIDLFFLDADKENYPNYYPLILKLLKPGGLLIAD  180 (239)
T ss_dssp             GTTTCCSTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEE
T ss_pred             cccccCCCCCcCEEEEeCCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence                  1 6799998765543   2346788899999999865

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=96.58  E-value=0.0059  Score=52.05  Aligned_cols=75  Identities=17%  Similarity=0.172  Sum_probs=51.7

Q ss_pred             CCeEEEEec-ChHHHHHHHHHHHcCCeEEEE-eCCcHHHHHHHHh---cCCcE---EEcCCChhHHHHhh-------CCc
Q 018382          181 GLRGGILGL-GGVGHMGVLIAKAMGHHVTVI-SSSDKKRVEAMEH---LGADQ---YLVSSDATRMQEAA-------DSL  245 (357)
Q Consensus       181 ~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~-~~~~~~~~~~~~~---~g~~~---vv~~~~~~~~~~~~-------~~~  245 (357)
                      |+++||+|+ |++|.++++.+...|++|+++ .+++++.+.+.+.   .+...   ..|..+.+.++++.       +++
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   80 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTI   80 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            467899987 999999999999999999985 6776665544332   24321   23555554444332       379


Q ss_pred             cEEEEcCCCC
Q 018382          246 DYIIDTVPAN  255 (357)
Q Consensus       246 d~v~d~~g~~  255 (357)
                      |++|+++|..
T Consensus        81 d~li~~Ag~~   90 (244)
T 1edo_A           81 DVVVNNAGIT   90 (244)
T ss_dssp             SEEEECCCCC
T ss_pred             CEEEECCCCC
Confidence            9999998753

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=96.58  E-value=0.0052  Score=52.70  Aligned_cols=75  Identities=21%  Similarity=0.240  Sum_probs=51.3

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCc-HHHHHHHH---hcCCcE---EEcCCChhHHHHhh-------CC
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSD-KKRVEAME---HLGADQ---YLVSSDATRMQEAA-------DS  244 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~-~~~~~~~~---~~g~~~---vv~~~~~~~~~~~~-------~~  244 (357)
                      .++++||+|+ |++|.++++.+...|++|+++.+.. ++.+.+.+   ..|.+.   ..|..+.+.++++.       ++
T Consensus         3 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   82 (246)
T 3osu_A            3 MTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGS   82 (246)
T ss_dssp             CSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            3578999987 9999999999999999999887643 44433332   234332   23555554433332       37


Q ss_pred             ccEEEEcCCC
Q 018382          245 LDYIIDTVPA  254 (357)
Q Consensus       245 ~d~v~d~~g~  254 (357)
                      +|++++++|.
T Consensus        83 id~lv~nAg~   92 (246)
T 3osu_A           83 LDVLVNNAGI   92 (246)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999885

>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A

Probab=96.57  E-value=0.005  Score=55.22  Aligned_cols=94  Identities=13%  Similarity=0.141  Sum_probs=64.2

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHH-cCC-eEEEEeCCcHHHHHHHHhcCCc--EEEcCCChhHHHHhhCCccEEEEcCCC
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKA-MGH-HVTVISSSDKKRVEAMEHLGAD--QYLVSSDATRMQEAADSLDYIIDTVPA  254 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~-~g~-~V~~~~~~~~~~~~~~~~~g~~--~vv~~~~~~~~~~~~~~~d~v~d~~g~  254 (357)
                      ....+++|+|+|.+|...++.+.. .+. +|.+..++.++.+.+.++++..  .+. ..+   .++.. ++|+|+.|+..
T Consensus       123 ~~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~~~~a~~la~~~~~~~~~~~-~~~---~~e~v-~aDvVi~aTp~  197 (322)
T 1omo_A          123 KNSSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRGISAS-VQP---AEEAS-RCDVLVTTTPS  197 (322)
T ss_dssp             TTCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTTCCEE-ECC---HHHHT-SSSEEEECCCC
T ss_pred             CCCCEEEEEcCcHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhcCceEE-ECC---HHHHh-CCCEEEEeeCC
Confidence            567889999999999988776665 455 8889999988888777655521  111 222   33444 79999999887


Q ss_pred             CCChHHHHhccccCCeEEEEccCC
Q 018382          255 NHPLEPYLSLLKLDGKLILTGVIN  278 (357)
Q Consensus       255 ~~~~~~~~~~l~~~G~~v~~g~~~  278 (357)
                      ....- ....++++-.++.+|...
T Consensus       198 ~~pv~-~~~~l~~G~~V~~ig~~~  220 (322)
T 1omo_A          198 RKPVV-KAEWVEEGTHINAIGADG  220 (322)
T ss_dssp             SSCCB-CGGGCCTTCEEEECSCCS
T ss_pred             CCcee-cHHHcCCCeEEEECCCCC
Confidence            53221 135678877777776543

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=96.57  E-value=0.0098  Score=51.89  Aligned_cols=75  Identities=21%  Similarity=0.216  Sum_probs=52.1

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHH-------HHHHH---HhcCCc---EEEcCCChhHHHHh----
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKK-------RVEAM---EHLGAD---QYLVSSDATRMQEA----  241 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~-------~~~~~---~~~g~~---~vv~~~~~~~~~~~----  241 (357)
                      .++++||+|+ +++|.++++.+...|++|++++++.++       .+...   +..|..   ...|..+.+.++++    
T Consensus         5 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   84 (274)
T 3e03_A            5 SGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVAAT   84 (274)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHH
Confidence            5789999987 999999999998899999999988642       22211   123432   22456665443332    


Q ss_pred             ---hCCccEEEEcCCC
Q 018382          242 ---ADSLDYIIDTVPA  254 (357)
Q Consensus       242 ---~~~~d~v~d~~g~  254 (357)
                         .+++|++++++|.
T Consensus        85 ~~~~g~iD~lvnnAG~  100 (274)
T 3e03_A           85 VDTFGGIDILVNNASA  100 (274)
T ss_dssp             HHHHSCCCEEEECCCC
T ss_pred             HHHcCCCCEEEECCCc
Confidence               2479999999985

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=96.56  E-value=0.012  Score=49.36  Aligned_cols=73  Identities=15%  Similarity=0.056  Sum_probs=57.8

Q ss_pred             eEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEE-cCCChhHHHHh-hCCccEEEEcCCCC
Q 018382          183 RGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYL-VSSDATRMQEA-ADSLDYIIDTVPAN  255 (357)
Q Consensus       183 ~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv-~~~~~~~~~~~-~~~~d~v~d~~g~~  255 (357)
                      +|+|+|+|.+|..+++.+...|.+|+++++++++.+.+.+.+|...+. |..+.+.+++. ...+|+++-+++..
T Consensus         2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d   76 (218)
T 3l4b_C            2 KVIIIGGETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVILTPRD   76 (218)
T ss_dssp             CEEEECCHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEECCSCH
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEEecCCc
Confidence            588999999999999999999999999999999888776656754332 44455555554 35899999998886

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=96.56  E-value=0.0094  Score=52.31  Aligned_cols=75  Identities=19%  Similarity=0.183  Sum_probs=52.6

Q ss_pred             CCCeEEEEec---ChHHHHHHHHHHHcCCeEEEEeCCcH---HHHHHHHhcCCc--EEEcCCChhHHHHhh-------CC
Q 018382          180 SGLRGGILGL---GGVGHMGVLIAKAMGHHVTVISSSDK---KRVEAMEHLGAD--QYLVSSDATRMQEAA-------DS  244 (357)
Q Consensus       180 ~~~~VlI~G~---g~~G~~ai~la~~~g~~V~~~~~~~~---~~~~~~~~~g~~--~vv~~~~~~~~~~~~-------~~  244 (357)
                      .++++||+|+   |++|.++++.+...|++|++++++++   ..+.+.+..|..  ...|..+.+.++++.       ++
T Consensus        20 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   99 (285)
T 2p91_A           20 EGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENWGS   99 (285)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4688999975   69999999998888999999998875   333443434422  224666654443332       37


Q ss_pred             ccEEEEcCCC
Q 018382          245 LDYIIDTVPA  254 (357)
Q Consensus       245 ~d~v~d~~g~  254 (357)
                      +|++++++|.
T Consensus       100 iD~lv~~Ag~  109 (285)
T 2p91_A          100 LDIIVHSIAY  109 (285)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999985

>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*

Probab=96.56  E-value=0.0035  Score=56.36  Aligned_cols=88  Identities=22%  Similarity=0.283  Sum_probs=66.0

Q ss_pred             CCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCC----
Q 018382          180 SGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPAN----  255 (357)
Q Consensus       180 ~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~----  255 (357)
                      .|++|.|+|.|.+|..+++.++..|++|++..++..+.+...+ +|....    +   ++++....|+|+.++...    
T Consensus       144 ~g~tvGIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~-~g~~~~----~---l~ell~~aDvV~l~~P~t~~t~  215 (330)
T 4e5n_A          144 DNATVGFLGMGAIGLAMADRLQGWGATLQYHEAKALDTQTEQR-LGLRQV----A---CSELFASSDFILLALPLNADTL  215 (330)
T ss_dssp             TTCEEEEECCSHHHHHHHHHTTTSCCEEEEECSSCCCHHHHHH-HTEEEC----C---HHHHHHHCSEEEECCCCSTTTT
T ss_pred             CCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCCCcHhHHHh-cCceeC----C---HHHHHhhCCEEEEcCCCCHHHH
Confidence            5789999999999999999999999999999988644444445 675321    1   334445689999887642    


Q ss_pred             CCh-HHHHhccccCCeEEEEc
Q 018382          256 HPL-EPYLSLLKLDGKLILTG  275 (357)
Q Consensus       256 ~~~-~~~~~~l~~~G~~v~~g  275 (357)
                      ..+ ...++.|+++..++.++
T Consensus       216 ~li~~~~l~~mk~gailIN~a  236 (330)
T 4e5n_A          216 HLVNAELLALVRPGALLVNPC  236 (330)
T ss_dssp             TCBCHHHHTTSCTTEEEEECS
T ss_pred             HHhCHHHHhhCCCCcEEEECC
Confidence            123 46788899999998885

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=96.56  E-value=0.0097  Score=52.46  Aligned_cols=73  Identities=18%  Similarity=0.061  Sum_probs=55.3

Q ss_pred             CCeEEEEec-ChHHHHHHHHHHHcC-CeEEEEeCCcHHH--HHHHHhcCCcEE-EcCCChhHHHHhhCCccEEEEcCCC
Q 018382          181 GLRGGILGL-GGVGHMGVLIAKAMG-HHVTVISSSDKKR--VEAMEHLGADQY-LVSSDATRMQEAADSLDYIIDTVPA  254 (357)
Q Consensus       181 ~~~VlI~G~-g~~G~~ai~la~~~g-~~V~~~~~~~~~~--~~~~~~~g~~~v-v~~~~~~~~~~~~~~~d~v~d~~g~  254 (357)
                      .++|||+|+ |.+|..+++.+...| .+|++++++.++.  ..+.. .+...+ .|..+++.+.+...++|+||.+++.
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~~-~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~   82 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRL-QGAEVVQGDQDDQVIMELALNGAYATFIVTNY   82 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHHH-TTCEEEECCTTCHHHHHHHHTTCSEEEECCCH
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHHH-CCCEEEEecCCCHHHHHHHHhcCCEEEEeCCC
Confidence            468999997 999999998888778 8999999986653  22333 455432 4666777777777899999998873

>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*

Probab=96.55  E-value=0.0047  Score=50.27  Aligned_cols=96  Identities=13%  Similarity=0.161  Sum_probs=63.0

Q ss_pred             CCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc---CCc--EEEcCCChhHHH-HhhCCccEEEEc
Q 018382          178 KQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL---GAD--QYLVSSDATRMQ-EAADSLDYIIDT  251 (357)
Q Consensus       178 ~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~---g~~--~vv~~~~~~~~~-~~~~~~d~v~d~  251 (357)
                      ++++++||-+|+|. |..++.+++. +.+|++++.+++..+.+++.+   |.+  .++. .+...+. ...+.+|+|+-.
T Consensus        20 ~~~~~~vLDiGcG~-G~~~~~la~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~-~~~~~l~~~~~~~fD~v~~~   96 (185)
T 3mti_A           20 LDDESIVVDATMGN-GNDTAFLAGL-SKKVYAFDVQEQALGKTSQRLSDLGIENTELIL-DGHENLDHYVREPIRAAIFN   96 (185)
T ss_dssp             CCTTCEEEESCCTT-SHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEE-SCGGGGGGTCCSCEEEEEEE
T ss_pred             CCCCCEEEEEcCCC-CHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEe-CcHHHHHhhccCCcCEEEEe
Confidence            47899999998864 7777788877 889999999998777665533   322  2332 2222221 123479999765


Q ss_pred             CCCC---------------CChHHHHhccccCCeEEEEcc
Q 018382          252 VPAN---------------HPLEPYLSLLKLDGKLILTGV  276 (357)
Q Consensus       252 ~g~~---------------~~~~~~~~~l~~~G~~v~~g~  276 (357)
                      .+--               ..+..+.+.|+|+|+++....
T Consensus        97 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~  136 (185)
T 3mti_A           97 LGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIY  136 (185)
T ss_dssp             EC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred             CCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEe
Confidence            3221               123667789999999987643

>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1

Probab=96.55  E-value=0.0095  Score=50.23  Aligned_cols=96  Identities=16%  Similarity=0.095  Sum_probs=66.2

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHc--CCeEEEEeCCcHHHHHHHHhc---CC---cEEEcCCChhHHHHhh-----CCc
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAM--GHHVTVISSSDKKRVEAMEHL---GA---DQYLVSSDATRMQEAA-----DSL  245 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~--g~~V~~~~~~~~~~~~~~~~~---g~---~~vv~~~~~~~~~~~~-----~~~  245 (357)
                      .++++||-+|+| .|..++.+++..  +.+|+.++.+++..+.+++.+   |.   -.++..+..+.+..+.     +.+
T Consensus        68 ~~~~~vLdiG~G-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~  146 (229)
T 2avd_A           68 IQAKKALDLGTF-TGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTF  146 (229)
T ss_dssp             TTCCEEEEECCT-TSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCE
T ss_pred             cCCCEEEEEcCC-ccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCc
Confidence            577899999987 688888898876  469999999998877766533   42   1233322223333332     579


Q ss_pred             cEEEEcCCCC---CChHHHHhccccCCeEEEEc
Q 018382          246 DYIIDTVPAN---HPLEPYLSLLKLDGKLILTG  275 (357)
Q Consensus       246 d~v~d~~g~~---~~~~~~~~~l~~~G~~v~~g  275 (357)
                      |+||-.....   ..+..+.+.|+++|.++...
T Consensus       147 D~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~~  179 (229)
T 2avd_A          147 DVAVVDADKENCSAYYERCLQLLRPGGILAVLR  179 (229)
T ss_dssp             EEEEECSCSTTHHHHHHHHHHHEEEEEEEEEEC
T ss_pred             cEEEECCCHHHHHHHHHHHHHHcCCCeEEEEEC
Confidence            9998644332   24677889999999988754

>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7

Probab=96.54  E-value=0.0097  Score=50.25  Aligned_cols=97  Identities=21%  Similarity=0.147  Sum_probs=67.5

Q ss_pred             CCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCC---cEEEcCCChhHHHHhhCCccEEEEcCCC
Q 018382          178 KQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGA---DQYLVSSDATRMQEAADSLDYIIDTVPA  254 (357)
Q Consensus       178 ~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~---~~vv~~~~~~~~~~~~~~~d~v~d~~g~  254 (357)
                      +.++++||-+|+|. |..+..+++. +.+|++++.+++..+.+++.+..   ..++..+..+.. ...+.+|+|+....-
T Consensus        68 ~~~~~~vLdiG~G~-G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~v~~~~~~  144 (231)
T 1vbf_A           68 LHKGQKVLEIGTGI-GYYTALIAEI-VDKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGY-EEEKPYDRVVVWATA  144 (231)
T ss_dssp             CCTTCEEEEECCTT-SHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCC-GGGCCEEEEEESSBB
T ss_pred             CCCCCEEEEEcCCC-CHHHHHHHHH-cCEEEEEeCCHHHHHHHHHHHhhcCCeEEEECCccccc-ccCCCccEEEECCcH
Confidence            37889999999875 7777788876 48999999999888888775432   222222211111 123579999876655


Q ss_pred             CCChHHHHhccccCCeEEEEccC
Q 018382          255 NHPLEPYLSLLKLDGKLILTGVI  277 (357)
Q Consensus       255 ~~~~~~~~~~l~~~G~~v~~g~~  277 (357)
                      ......+.+.|+++|+++.....
T Consensus       145 ~~~~~~~~~~L~pgG~l~~~~~~  167 (231)
T 1vbf_A          145 PTLLCKPYEQLKEGGIMILPIGV  167 (231)
T ss_dssp             SSCCHHHHHTEEEEEEEEEEECS
T ss_pred             HHHHHHHHHHcCCCcEEEEEEcC
Confidence            54567889999999998876443

>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*

Probab=96.54  E-value=0.0093  Score=53.76  Aligned_cols=88  Identities=26%  Similarity=0.342  Sum_probs=65.5

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCC--
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANH--  256 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~--  256 (357)
                      -.+.+|.|+|.|.+|..+++.++..|.+|++.+++.++ +...+ +|...    .+   +.++....|+|+.++....  
T Consensus       148 l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~-~~~~~-~g~~~----~~---l~~~l~~aDvVil~vp~~~~t  218 (334)
T 2dbq_A          148 VYGKTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTRKE-EVERE-LNAEF----KP---LEDLLRESDFVVLAVPLTRET  218 (334)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCH-HHHHH-HCCEE----CC---HHHHHHHCSEEEECCCCCTTT
T ss_pred             CCCCEEEEEccCHHHHHHHHHHHhCCCEEEEECCCcch-hhHhh-cCccc----CC---HHHHHhhCCEEEECCCCChHH
Confidence            35789999999999999999999999999999988776 44444 67532    12   2334446899999887642  


Q ss_pred             --Ch-HHHHhccccCCeEEEEc
Q 018382          257 --PL-EPYLSLLKLDGKLILTG  275 (357)
Q Consensus       257 --~~-~~~~~~l~~~G~~v~~g  275 (357)
                        .+ ...+..|+++..++.++
T Consensus       219 ~~~i~~~~~~~mk~~ailIn~s  240 (334)
T 2dbq_A          219 YHLINEERLKLMKKTAILINIA  240 (334)
T ss_dssp             TTCBCHHHHHHSCTTCEEEECS
T ss_pred             HHhhCHHHHhcCCCCcEEEECC
Confidence              23 35667888888888775

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=96.53  E-value=0.0066  Score=54.81  Aligned_cols=75  Identities=13%  Similarity=0.001  Sum_probs=55.1

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcH----HHHHHHHhc-----C-Cc-EEEcCCChhHHHHhhCCccE
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDK----KRVEAMEHL-----G-AD-QYLVSSDATRMQEAADSLDY  247 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~----~~~~~~~~~-----g-~~-~vv~~~~~~~~~~~~~~~d~  247 (357)
                      .+.+|||+|+ |.+|..+++.+...|.+|++++++..    ....+...+     + .. ...|..+.+.+.++..++|+
T Consensus        24 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~  103 (351)
T 3ruf_A           24 SPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGVDH  103 (351)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTTCSE
T ss_pred             CCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcCCCE
Confidence            4679999987 99999999999889999999998543    233333211     2 22 22466667777777779999


Q ss_pred             EEEcCCC
Q 018382          248 IIDTVPA  254 (357)
Q Consensus       248 v~d~~g~  254 (357)
                      ||.+++.
T Consensus       104 Vih~A~~  110 (351)
T 3ruf_A          104 VLHQAAL  110 (351)
T ss_dssp             EEECCCC
T ss_pred             EEECCcc
Confidence            9999985

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.53  E-value=0.0021  Score=54.81  Aligned_cols=68  Identities=15%  Similarity=0.054  Sum_probs=47.5

Q ss_pred             CCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEE--EcCCChhHHHHh-------h--CCccEE
Q 018382          181 GLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQY--LVSSDATRMQEA-------A--DSLDYI  248 (357)
Q Consensus       181 ~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~v--v~~~~~~~~~~~-------~--~~~d~v  248 (357)
                      ++++||+|+ |++|.++++.+...|++|+++++++++..      +....  .|..+.+.++++       .  +++|++
T Consensus         3 ~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~l   76 (236)
T 1ooe_A            3 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA------DSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGV   76 (236)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS------SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc------cccEEEeCCCCCHHHHHHHHHHHHHHhCCCCCCEE
Confidence            568999987 99999999999999999999998866532      11111  233343333222       1  479999


Q ss_pred             EEcCCC
Q 018382          249 IDTVPA  254 (357)
Q Consensus       249 ~d~~g~  254 (357)
                      ++++|.
T Consensus        77 v~~Ag~   82 (236)
T 1ooe_A           77 FCVAGG   82 (236)
T ss_dssp             EECCCC
T ss_pred             EECCcc
Confidence            999984

>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}

Probab=96.51  E-value=0.0079  Score=51.70  Aligned_cols=97  Identities=18%  Similarity=0.139  Sum_probs=68.2

Q ss_pred             CCCCCCeEEEEecChHHHHHHHHHHHc--CCeEEEEeCCcHHHHHHHHhc----CCcE--EEcCCChhHHHHhh-CCccE
Q 018382          177 LKQSGLRGGILGLGGVGHMGVLIAKAM--GHHVTVISSSDKKRVEAMEHL----GADQ--YLVSSDATRMQEAA-DSLDY  247 (357)
Q Consensus       177 ~~~~~~~VlI~G~g~~G~~ai~la~~~--g~~V~~~~~~~~~~~~~~~~~----g~~~--vv~~~~~~~~~~~~-~~~d~  247 (357)
                      .++++++||.+|+|. |..++.+++..  +.+|++++.+++..+.+++.+    |.+.  ++..+-.+.  .+. +.+|+
T Consensus        93 ~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~--~~~~~~~D~  169 (258)
T 2pwy_A           93 DLAPGMRVLEAGTGS-GGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEA--ELEEAAYDG  169 (258)
T ss_dssp             TCCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGC--CCCTTCEEE
T ss_pred             CCCCCCEEEEECCCc-CHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhc--CCCCCCcCE
Confidence            348999999999875 88888899886  469999999988877776643    5222  222211111  122 36999


Q ss_pred             EEEcCCCC-CChHHHHhccccCCeEEEEcc
Q 018382          248 IIDTVPAN-HPLEPYLSLLKLDGKLILTGV  276 (357)
Q Consensus       248 v~d~~g~~-~~~~~~~~~l~~~G~~v~~g~  276 (357)
                      |+...... ..+..+.+.|+++|+++.+..
T Consensus       170 v~~~~~~~~~~l~~~~~~L~~gG~l~~~~~  199 (258)
T 2pwy_A          170 VALDLMEPWKVLEKAALALKPDRFLVAYLP  199 (258)
T ss_dssp             EEEESSCGGGGHHHHHHHEEEEEEEEEEES
T ss_pred             EEECCcCHHHHHHHHHHhCCCCCEEEEEeC
Confidence            98766554 467888999999999987643

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=96.51  E-value=0.01  Score=50.94  Aligned_cols=72  Identities=14%  Similarity=0.106  Sum_probs=49.2

Q ss_pred             CCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEE-EcCC-ChhHHHHhhCCccEEEEcCCC
Q 018382          179 QSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQY-LVSS-DATRMQEAADSLDYIIDTVPA  254 (357)
Q Consensus       179 ~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~v-v~~~-~~~~~~~~~~~~d~v~d~~g~  254 (357)
                      -.++++||+|+ |++|.++++.+...|++|++++++++..   .+ ++.... .|.. +.+.+.+...++|++|+++|.
T Consensus        17 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~---~~-~~~~~~~~D~~~~~~~~~~~~~~iD~lv~~Ag~   91 (249)
T 1o5i_A           17 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELL---KR-SGHRYVVCDLRKDLDLLFEKVKEVDILVLNAGG   91 (249)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHH---HH-TCSEEEECCTTTCHHHHHHHSCCCSEEEECCCC
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHH---Hh-hCCeEEEeeHHHHHHHHHHHhcCCCEEEECCCC
Confidence            45789999987 9999999999988999999999986332   23 453222 2331 111111222389999999985

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=96.51  E-value=0.0047  Score=53.97  Aligned_cols=94  Identities=13%  Similarity=0.123  Sum_probs=64.4

Q ss_pred             eEEEEec-ChHHHHHHHHHHHc--CCeEEEEeCCcHHHHHHHHhcCCcE-EEcCCChhHHHHhhCCccEEEEcCCCC---
Q 018382          183 RGGILGL-GGVGHMGVLIAKAM--GHHVTVISSSDKKRVEAMEHLGADQ-YLVSSDATRMQEAADSLDYIIDTVPAN---  255 (357)
Q Consensus       183 ~VlI~G~-g~~G~~ai~la~~~--g~~V~~~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~~~~d~v~d~~g~~---  255 (357)
                      +|||+|+ |.+|..+++.+...  |.+|++++++.++...+.. .+... ..|..+.+.+.+...++|+||.+++..   
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~~~~~   79 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAA-QGITVRQADYGDEAALTSALQGVEKLLLISSSEVGQ   79 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHH-TTCEEEECCTTCHHHHHHHTTTCSEEEECC------
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhc-CCCeEEEcCCCCHHHHHHHHhCCCEEEEeCCCCchH
Confidence            4899987 99999999988877  8999999998776555444 45433 246667777777778999999998752   


Q ss_pred             --CChHHHHhccccC--CeEEEEccC
Q 018382          256 --HPLEPYLSLLKLD--GKLILTGVI  277 (357)
Q Consensus       256 --~~~~~~~~~l~~~--G~~v~~g~~  277 (357)
                        ......++.++..  ++++.++..
T Consensus        80 ~~~~~~~l~~a~~~~~~~~~v~~Ss~  105 (286)
T 2zcu_A           80 RAPQHRNVINAAKAAGVKFIAYTSLL  105 (286)
T ss_dssp             --CHHHHHHHHHHHHTCCEEEEEEET
T ss_pred             HHHHHHHHHHHHHHcCCCEEEEECCC
Confidence              1233344444332  578877653

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=96.50  E-value=0.0092  Score=55.43  Aligned_cols=94  Identities=13%  Similarity=0.181  Sum_probs=69.9

Q ss_pred             CCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEE-cCCChhHHHHhh-CCccEEEEcCCCCCC
Q 018382          180 SGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYL-VSSDATRMQEAA-DSLDYIIDTVPANHP  257 (357)
Q Consensus       180 ~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv-~~~~~~~~~~~~-~~~d~v~d~~g~~~~  257 (357)
                      .+..|+|+|.|.+|..+++.++..|.+|++++.++++.+.+++ .|...++ |..+++.++... ..+|+|+-+++....
T Consensus         3 ~~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~-~g~~vi~GDat~~~~L~~agi~~A~~viv~~~~~~~   81 (413)
T 3l9w_A            3 HGMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPDHIETLRK-FGMKVFYGDATRMDLLESAGAAKAEVLINAIDDPQT   81 (413)
T ss_dssp             -CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHH-TTCCCEESCTTCHHHHHHTTTTTCSEEEECCSSHHH
T ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHh-CCCeEEEcCCCCHHHHHhcCCCccCEEEECCCChHH
Confidence            4567999999999999999999999999999999999988887 8865432 555666666653 489999999987522


Q ss_pred             hH---HHHhccccCCeEEEE
Q 018382          258 LE---PYLSLLKLDGKLILT  274 (357)
Q Consensus       258 ~~---~~~~~l~~~G~~v~~  274 (357)
                      ..   ...+.+.+..+++.-
T Consensus        82 n~~i~~~ar~~~p~~~Iiar  101 (413)
T 3l9w_A           82 NLQLTEMVKEHFPHLQIIAR  101 (413)
T ss_dssp             HHHHHHHHHHHCTTCEEEEE
T ss_pred             HHHHHHHHHHhCCCCeEEEE
Confidence            22   233445566565543

>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1

Probab=96.50  E-value=0.0077  Score=53.93  Aligned_cols=90  Identities=11%  Similarity=0.149  Sum_probs=66.1

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeC-CcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCC-
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISS-SDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANH-  256 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~-~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~-  256 (357)
                      -.|++|.|+|.|.+|..+++.++..|.+|++.++ +.++ ..+.+ +|+.. .  .+   ++++....|+|+.++.... 
T Consensus       144 l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~-~~~~~-~g~~~-~--~~---l~ell~~aDvVil~~p~~~~  215 (320)
T 1gdh_A          144 LDNKTLGIYGFGSIGQALAKRAQGFDMDIDYFDTHRASS-SDEAS-YQATF-H--DS---LDSLLSVSQFFSLNAPSTPE  215 (320)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSCCCH-HHHHH-HTCEE-C--SS---HHHHHHHCSEEEECCCCCTT
T ss_pred             CCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcCh-hhhhh-cCcEE-c--CC---HHHHHhhCCEEEEeccCchH
Confidence            4678999999999999999999999999999998 7665 34444 67642 1  11   2334457899999887531 


Q ss_pred             ---Ch-HHHHhccccCCeEEEEcc
Q 018382          257 ---PL-EPYLSLLKLDGKLILTGV  276 (357)
Q Consensus       257 ---~~-~~~~~~l~~~G~~v~~g~  276 (357)
                         .+ ...++.|+++..++.++-
T Consensus       216 t~~~i~~~~l~~mk~gailIn~ar  239 (320)
T 1gdh_A          216 TRYFFNKATIKSLPQGAIVVNTAR  239 (320)
T ss_dssp             TTTCBSHHHHTTSCTTEEEEECSC
T ss_pred             HHhhcCHHHHhhCCCCcEEEECCC
Confidence               23 346788999988888754

>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*

Probab=96.48  E-value=0.0028  Score=54.82  Aligned_cols=125  Identities=18%  Similarity=0.253  Sum_probs=72.2

Q ss_pred             cceEECCCCCCccccccccchhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh
Q 018382          144 KFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH  223 (357)
Q Consensus       144 ~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~  223 (357)
                      ...+.+++++.+.....-...  .....+...  ++++++||-+|+|. |..++.+++ .|++|++++.++...+.+++.
T Consensus        88 ~~~~~l~p~~~fgtg~~~tt~--~~~~~l~~~--~~~~~~VLDiGcG~-G~l~~~la~-~g~~v~gvDi~~~~v~~a~~n  161 (254)
T 2nxc_A           88 EIPLVIEPGMAFGTGHHETTR--LALKALARH--LRPGDKVLDLGTGS-GVLAIAAEK-LGGKALGVDIDPMVLPQAEAN  161 (254)
T ss_dssp             SEEEECCCC-----CCSHHHH--HHHHHHHHH--CCTTCEEEEETCTT-SHHHHHHHH-TTCEEEEEESCGGGHHHHHHH
T ss_pred             ceEEEECCCccccCCCCHHHH--HHHHHHHHh--cCCCCEEEEecCCC-cHHHHHHHH-hCCeEEEEECCHHHHHHHHHH
Confidence            455667666655443211111  112223333  37889999999865 677777666 477999999998877666653


Q ss_pred             c---CCc-EEEcCCChhHHHHh-hCCccEEEEcCCCC---CChHHHHhccccCCeEEEEccC
Q 018382          224 L---GAD-QYLVSSDATRMQEA-ADSLDYIIDTVPAN---HPLEPYLSLLKLDGKLILTGVI  277 (357)
Q Consensus       224 ~---g~~-~vv~~~~~~~~~~~-~~~~d~v~d~~g~~---~~~~~~~~~l~~~G~~v~~g~~  277 (357)
                      .   +.. .++..   +....+ .+.+|+|+......   ..+..+.+.|+++|+++..+..
T Consensus       162 ~~~~~~~v~~~~~---d~~~~~~~~~fD~Vv~n~~~~~~~~~l~~~~~~LkpgG~lils~~~  220 (254)
T 2nxc_A          162 AKRNGVRPRFLEG---SLEAALPFGPFDLLVANLYAELHAALAPRYREALVPGGRALLTGIL  220 (254)
T ss_dssp             HHHTTCCCEEEES---CHHHHGGGCCEEEEEEECCHHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred             HHHcCCcEEEEEC---ChhhcCcCCCCCEEEECCcHHHHHHHHHHHHHHcCCCCEEEEEeec
Confidence            2   332 22221   122223 35799998654221   2456677889999999886543

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=96.47  E-value=0.0045  Score=53.99  Aligned_cols=71  Identities=18%  Similarity=0.218  Sum_probs=50.8

Q ss_pred             CCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCc-EEEcCCChhHHHHhh-------CCccEEE
Q 018382          179 QSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGAD-QYLVSSDATRMQEAA-------DSLDYII  249 (357)
Q Consensus       179 ~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~~~-------~~~d~v~  249 (357)
                      ..+++|||+|+ +++|.++++.+...|++|+++++++++...     ... ...|..+.+.++++.       +++|+++
T Consensus        12 ~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~-----~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv   86 (269)
T 3vtz_A           12 FTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVN-----VSDHFKIDVTNEEEVKEAVEKTTKKYGRIDILV   86 (269)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CTT-----SSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhccC-----ceeEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            56889999987 999999999998899999999988654311     121 234666654433332       3799999


Q ss_pred             EcCCC
Q 018382          250 DTVPA  254 (357)
Q Consensus       250 d~~g~  254 (357)
                      +++|.
T Consensus        87 ~nAg~   91 (269)
T 3vtz_A           87 NNAGI   91 (269)
T ss_dssp             ECCCC
T ss_pred             ECCCc
Confidence            99985

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=96.47  E-value=0.0043  Score=54.32  Aligned_cols=94  Identities=11%  Similarity=0.077  Sum_probs=65.4

Q ss_pred             eEEEEec-ChHHHHHHHHHHHc--CCeEEEEeCCcHHHHHHHHhcCCcE-EEcCCChhHHHHhhCCccEEEEcCCCCC--
Q 018382          183 RGGILGL-GGVGHMGVLIAKAM--GHHVTVISSSDKKRVEAMEHLGADQ-YLVSSDATRMQEAADSLDYIIDTVPANH--  256 (357)
Q Consensus       183 ~VlI~G~-g~~G~~ai~la~~~--g~~V~~~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~~~~d~v~d~~g~~~--  256 (357)
                      +|||+|+ |.+|..+++.+...  |.+|++++++.++...+.. .+... ..|..+++.+.+...++|+||.+++...  
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~-~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~~~   80 (287)
T 2jl1_A            2 SIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLAD-QGVEVRHGDYNQPESLQKAFAGVSKLLFISGPHYDN   80 (287)
T ss_dssp             CEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHH-TTCEEEECCTTCHHHHHHHTTTCSEEEECCCCCSCH
T ss_pred             eEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhh-cCCeEEEeccCCHHHHHHHHhcCCEEEEcCCCCcCc
Confidence            6899987 99999999888877  8899999998776655544 45433 2466677777777779999999988531  


Q ss_pred             -----ChHHHHhccccC--CeEEEEccC
Q 018382          257 -----PLEPYLSLLKLD--GKLILTGVI  277 (357)
Q Consensus       257 -----~~~~~~~~l~~~--G~~v~~g~~  277 (357)
                           .....++.++..  ++++.++..
T Consensus        81 ~~n~~~~~~l~~a~~~~~~~~~v~~Ss~  108 (287)
T 2jl1_A           81 TLLIVQHANVVKAARDAGVKHIAYTGYA  108 (287)
T ss_dssp             HHHHHHHHHHHHHHHHTTCSEEEEEEET
T ss_pred             hHHHHHHHHHHHHHHHcCCCEEEEECCC
Confidence                 112233333333  478877653

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=96.47  E-value=0.008  Score=53.94  Aligned_cols=75  Identities=17%  Similarity=0.124  Sum_probs=50.4

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCC-----cHHHHHHHH---hcCCcE---EEcCCChhHHHHhh-----
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSS-----DKKRVEAME---HLGADQ---YLVSSDATRMQEAA-----  242 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~-----~~~~~~~~~---~~g~~~---vv~~~~~~~~~~~~-----  242 (357)
                      .++++||+|+ |++|.++++.+...|++|++++++     +++.+.+.+   ..+...   ..|..+.+.+++..     
T Consensus         4 ~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~   83 (324)
T 3u9l_A            4 SKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQIIG   83 (324)
T ss_dssp             -CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence            3578999987 999999999999999999998875     233333322   134321   23555554433322     


Q ss_pred             --CCccEEEEcCCC
Q 018382          243 --DSLDYIIDTVPA  254 (357)
Q Consensus       243 --~~~d~v~d~~g~  254 (357)
                        +++|++++++|.
T Consensus        84 ~~g~iD~lVnnAG~   97 (324)
T 3u9l_A           84 EDGRIDVLIHNAGH   97 (324)
T ss_dssp             HHSCCSEEEECCCC
T ss_pred             HcCCCCEEEECCCc
Confidence              389999999984

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=96.46  E-value=0.0047  Score=54.44  Aligned_cols=93  Identities=14%  Similarity=0.093  Sum_probs=62.5

Q ss_pred             CCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCc---E---EEcCCChhHHHHhhCCccEEEEcCC
Q 018382          180 SGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGAD---Q---YLVSSDATRMQEAADSLDYIIDTVP  253 (357)
Q Consensus       180 ~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~---~---vv~~~~~~~~~~~~~~~d~v~d~~g  253 (357)
                      .+++++|+|+|++|.+++..+...| +|+++.++.++.+.+.+.++..   .   .++..+   +.+..+.+|+++++++
T Consensus       127 ~~k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~---~~~~~~~~DilVn~ag  202 (287)
T 1nvt_A          127 KDKNIVIYGAGGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSG---LDVDLDGVDIIINATP  202 (287)
T ss_dssp             CSCEEEEECCSHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEEC---TTCCCTTCCEEEECSC
T ss_pred             CCCEEEEECchHHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccccceeEEEee---HHHhhCCCCEEEECCC
Confidence            5789999999999999999998899 9999999888776665544320   0   011111   1222347999999998


Q ss_pred             CCCCh-----HH-HHhccccCCeEEEEcc
Q 018382          254 ANHPL-----EP-YLSLLKLDGKLILTGV  276 (357)
Q Consensus       254 ~~~~~-----~~-~~~~l~~~G~~v~~g~  276 (357)
                      ....-     .. ..+.++++..++++..
T Consensus       203 ~~~~~~~~~~~~~~~~~l~~~~~v~Dv~y  231 (287)
T 1nvt_A          203 IGMYPNIDVEPIVKAEKLREDMVVMDLIY  231 (287)
T ss_dssp             TTCTTCCSSCCSSCSTTCCSSSEEEECCC
T ss_pred             CCCCCCCCCCCCCCHHHcCCCCEEEEeee
Confidence            75211     01 2355677777777764

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=96.46  E-value=0.0085  Score=54.52  Aligned_cols=50  Identities=24%  Similarity=0.278  Sum_probs=43.5

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcE
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQ  228 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~  228 (357)
                      -+|++|+|.|.|.+|..+++.+...|++|++.+++.++.+.+.+++|++.
T Consensus       171 L~GktV~V~G~G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~ga~~  220 (364)
T 1leh_A          171 LEGLAVSVQGLGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGADA  220 (364)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCCEE
T ss_pred             CCcCEEEEECchHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCEE
Confidence            47899999999999999999999999999999988888776666678643

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=96.45  E-value=0.007  Score=54.14  Aligned_cols=76  Identities=17%  Similarity=0.196  Sum_probs=52.2

Q ss_pred             CCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCC------------cHHHHHHHH---hcCCcE---EEcCCChhHHH
Q 018382          179 QSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSS------------DKKRVEAME---HLGADQ---YLVSSDATRMQ  239 (357)
Q Consensus       179 ~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~------------~~~~~~~~~---~~g~~~---vv~~~~~~~~~  239 (357)
                      -.++++||+|+ +++|.++++.+...|++|++++++            .++.+...+   ..|...   ..|..+.+.++
T Consensus        44 l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~  123 (317)
T 3oec_A           44 LQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQ  123 (317)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHH
Confidence            35789999987 999999999999999999998765            333333222   245332   23556654443


Q ss_pred             Hhh-------CCccEEEEcCCC
Q 018382          240 EAA-------DSLDYIIDTVPA  254 (357)
Q Consensus       240 ~~~-------~~~d~v~d~~g~  254 (357)
                      ++.       +++|++|+++|.
T Consensus       124 ~~~~~~~~~~g~iD~lVnnAg~  145 (317)
T 3oec_A          124 AVVDEALAEFGHIDILVSNVGI  145 (317)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCC
T ss_pred             HHHHHHHHHcCCCCEEEECCCC
Confidence            332       379999999885

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=96.45  E-value=0.012  Score=52.36  Aligned_cols=92  Identities=13%  Similarity=0.126  Sum_probs=63.1

Q ss_pred             CCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCc------HHHHHHH--HhcCCcEE-EcCCChhHHHHhhCCccEEEE
Q 018382          181 GLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSD------KKRVEAM--EHLGADQY-LVSSDATRMQEAADSLDYIID  250 (357)
Q Consensus       181 ~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~------~~~~~~~--~~~g~~~v-v~~~~~~~~~~~~~~~d~v~d  250 (357)
                      ..+|||+|+ |.+|..+++.+...|.+|++++++.      ++.+.+.  ...+...+ .|..+.+.+.+...++|+||.
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~~~d~vi~   83 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLKQVDIVIS   83 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHcCCCEEEE
Confidence            457999987 9999999999888899999999985      2333222  12354332 466777777777789999999


Q ss_pred             cCCCCC--ChHHHHhccccC---CeEE
Q 018382          251 TVPANH--PLEPYLSLLKLD---GKLI  272 (357)
Q Consensus       251 ~~g~~~--~~~~~~~~l~~~---G~~v  272 (357)
                      +++...  ....+++.++..   ++++
T Consensus        84 ~a~~~~~~~~~~l~~aa~~~g~v~~~v  110 (321)
T 3c1o_A           84 ALPFPMISSQIHIINAIKAAGNIKRFL  110 (321)
T ss_dssp             CCCGGGSGGGHHHHHHHHHHCCCCEEE
T ss_pred             CCCccchhhHHHHHHHHHHhCCccEEe
Confidence            988531  233444444433   3666

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=96.45  E-value=0.0049  Score=53.41  Aligned_cols=77  Identities=10%  Similarity=0.036  Sum_probs=51.7

Q ss_pred             CCCCeEEEEec-ChHHHHHHHHHHHcC---CeEEEEeCCcHHHHHHHHh--cCCc-E--EEcCCChhHHHHhh-------
Q 018382          179 QSGLRGGILGL-GGVGHMGVLIAKAMG---HHVTVISSSDKKRVEAMEH--LGAD-Q--YLVSSDATRMQEAA-------  242 (357)
Q Consensus       179 ~~~~~VlI~G~-g~~G~~ai~la~~~g---~~V~~~~~~~~~~~~~~~~--~g~~-~--vv~~~~~~~~~~~~-------  242 (357)
                      -+++++||+|+ |++|.++++.+...|   ++|++++++.++.+.+.+.  .+.. .  ..|..+.+.++++.       
T Consensus        19 ~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   98 (267)
T 1sny_A           19 SHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVT   98 (267)
T ss_dssp             -CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHHHHHHHHHHHhc
Confidence            35678999987 999999999998889   8999999987644333220  1322 2  23555544333332       


Q ss_pred             C--CccEEEEcCCCC
Q 018382          243 D--SLDYIIDTVPAN  255 (357)
Q Consensus       243 ~--~~d~v~d~~g~~  255 (357)
                      +  ++|++|+++|..
T Consensus        99 g~~~id~li~~Ag~~  113 (267)
T 1sny_A           99 KDQGLNVLFNNAGIA  113 (267)
T ss_dssp             GGGCCSEEEECCCCC
T ss_pred             CCCCccEEEECCCcC
Confidence            2  699999999853

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=96.45  E-value=0.0055  Score=53.63  Aligned_cols=92  Identities=16%  Similarity=0.166  Sum_probs=65.1

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCCCh
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPL  258 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~~  258 (357)
                      -.+.+++|+|+|.+|.+++..+...|++|++..++.++.+.+.+.+|.. +.+  +   +.+....+|+|+.+++....-
T Consensus       127 ~~~~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~~~g~~-~~~--~---~~~~~~~aDiVi~atp~~~~~  200 (275)
T 2hk9_A          127 VKEKSILVLGAGGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKFPLE-VVN--S---PEEVIDKVQVIVNTTSVGLKD  200 (275)
T ss_dssp             GGGSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTTTSCEE-ECS--C---GGGTGGGCSEEEECSSTTSST
T ss_pred             cCCCEEEEECchHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHcCCe-eeh--h---HHhhhcCCCEEEEeCCCCCCC
Confidence            3578999999999999999999888999999999988877776656642 221  1   122335799999999875211


Q ss_pred             ---HH-HHhccccCCeEEEEcc
Q 018382          259 ---EP-YLSLLKLDGKLILTGV  276 (357)
Q Consensus       259 ---~~-~~~~l~~~G~~v~~g~  276 (357)
                         .. ....++++..++++..
T Consensus       201 ~~~~~i~~~~l~~g~~viDv~~  222 (275)
T 2hk9_A          201 EDPEIFNYDLIKKDHVVVDIIY  222 (275)
T ss_dssp             TCCCSSCGGGCCTTSEEEESSS
T ss_pred             CCCCCCCHHHcCCCCEEEEcCC
Confidence               11 1345677777777655

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=96.44  E-value=0.0045  Score=55.65  Aligned_cols=72  Identities=21%  Similarity=0.259  Sum_probs=52.2

Q ss_pred             CeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcE-EEcCCChhHHHHhhCCccEEEEcCCC
Q 018382          182 LRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQ-YLVSSDATRMQEAADSLDYIIDTVPA  254 (357)
Q Consensus       182 ~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~~~~d~v~d~~g~  254 (357)
                      -+|||+|+ |.+|..+++.+...|.+|++++++..+.+.+.. .+... ..|..+.+.+.++..++|+||.+++.
T Consensus        14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~-~~~~~~~~Dl~d~~~~~~~~~~~d~vih~a~~   87 (342)
T 2x4g_A           14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAY-LEPECRVAEMLDHAGLERALRGLDGVIFSAGY   87 (342)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGGG-GCCEEEECCTTCHHHHHHHTTTCSEEEEC---
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhcc-CCeEEEEecCCCHHHHHHHHcCCCEEEECCcc
Confidence            37999987 999999999998889999999988665433322 24332 23666667777777789999999874

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=96.44  E-value=0.0081  Score=51.21  Aligned_cols=71  Identities=18%  Similarity=0.167  Sum_probs=49.8

Q ss_pred             CCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcE-EEcCCCh---hHHHHh---hCCccEEEEcC
Q 018382          181 GLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQ-YLVSSDA---TRMQEA---ADSLDYIIDTV  252 (357)
Q Consensus       181 ~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~-vv~~~~~---~~~~~~---~~~~d~v~d~~  252 (357)
                      ++++||+|+ |++|.++++.+...|++|+++++++++.  ..+ +|... ..|..+.   ..++++   .+++|++++++
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~~--~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~g~id~lv~~A   78 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEA--AQS-LGAVPLPTDLEKDDPKGLVKRALEALGGLHVLVHAA   78 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHH--HHH-HTCEEEECCTTTSCHHHHHHHHHHHHTSCCEEEECC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH--HHh-hCcEEEecCCchHHHHHHHHHHHHHcCCCCEEEECC
Confidence            568999987 9999999999999999999999987762  223 56322 2344431   122222   24799999998


Q ss_pred             CC
Q 018382          253 PA  254 (357)
Q Consensus       253 g~  254 (357)
                      |.
T Consensus        79 g~   80 (239)
T 2ekp_A           79 AV   80 (239)
T ss_dssp             CC
T ss_pred             CC
Confidence            75

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=96.43  E-value=0.0063  Score=54.68  Aligned_cols=76  Identities=16%  Similarity=0.103  Sum_probs=53.3

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHH----HHHhcCC-cEE--EcCCChhHHHHhhC--CccEEE
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVE----AMEHLGA-DQY--LVSSDATRMQEAAD--SLDYII  249 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~----~~~~~g~-~~v--v~~~~~~~~~~~~~--~~d~v~  249 (357)
                      .+.+|||+|+ |.+|..+++.+...|.+|++++++.++...    +.+..+. ..+  .|..+.+.+.++..  ++|+||
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi   83 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDAHPITAAI   83 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCCEEE
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhccCCcEEE
Confidence            4568999987 999999999999899999999876543322    2221232 122  35556666666544  899999


Q ss_pred             EcCCCC
Q 018382          250 DTVPAN  255 (357)
Q Consensus       250 d~~g~~  255 (357)
                      ++++..
T Consensus        84 h~A~~~   89 (341)
T 3enk_A           84 HFAALK   89 (341)
T ss_dssp             ECCCCC
T ss_pred             ECcccc
Confidence            999864

>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}

Probab=96.42  E-value=0.012  Score=53.61  Aligned_cols=87  Identities=18%  Similarity=0.271  Sum_probs=65.8

Q ss_pred             CCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCC---
Q 018382          180 SGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANH---  256 (357)
Q Consensus       180 ~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~---  256 (357)
                      .|++|.|+|.|.+|..+++.++.+|++|++.+++.. .+.+.+ .|+..    .   .++++....|+|+.++....   
T Consensus       175 ~gktvGIIGlG~IG~~vA~~l~~fG~~V~~~d~~~~-~~~~~~-~g~~~----~---~l~ell~~aDvV~l~~Plt~~T~  245 (365)
T 4hy3_A          175 AGSEIGIVGFGDLGKALRRVLSGFRARIRVFDPWLP-RSMLEE-NGVEP----A---SLEDVLTKSDFIFVVAAVTSENK  245 (365)
T ss_dssp             SSSEEEEECCSHHHHHHHHHHTTSCCEEEEECSSSC-HHHHHH-TTCEE----C---CHHHHHHSCSEEEECSCSSCC--
T ss_pred             CCCEEEEecCCcccHHHHHhhhhCCCEEEEECCCCC-HHHHhh-cCeee----C---CHHHHHhcCCEEEEcCcCCHHHH
Confidence            478999999999999999999999999999988753 333444 67542    1   23455668999998766431   


Q ss_pred             -Ch-HHHHhccccCCeEEEEc
Q 018382          257 -PL-EPYLSLLKLDGKLILTG  275 (357)
Q Consensus       257 -~~-~~~~~~l~~~G~~v~~g  275 (357)
                       .+ ...++.|+++..++.++
T Consensus       246 ~li~~~~l~~mk~gailIN~a  266 (365)
T 4hy3_A          246 RFLGAEAFSSMRRGAAFILLS  266 (365)
T ss_dssp             -CCCHHHHHTSCTTCEEEECS
T ss_pred             hhcCHHHHhcCCCCcEEEECc
Confidence             22 46788899999999886

>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*

Probab=96.42  E-value=0.0086  Score=53.39  Aligned_cols=96  Identities=15%  Similarity=0.214  Sum_probs=66.8

Q ss_pred             CCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc---CC---cEEEcCCChhHHHHhhCCccEEEE
Q 018382          177 LKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL---GA---DQYLVSSDATRMQEAADSLDYIID  250 (357)
Q Consensus       177 ~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~---g~---~~vv~~~~~~~~~~~~~~~d~v~d  250 (357)
                      .+.++++||-+|+|. |..+..+++..|++|++++.+++..+.+++..   |.   ..++.. +.   .++.+.+|+|+.
T Consensus        87 ~~~~~~~vLDiGcG~-G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~-d~---~~~~~~fD~v~~  161 (318)
T 2fk8_A           87 DLKPGMTLLDIGCGW-GTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQ-GW---EDFAEPVDRIVS  161 (318)
T ss_dssp             CCCTTCEEEEESCTT-SHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEES-CG---GGCCCCCSEEEE
T ss_pred             CCCCcCEEEEEcccc-hHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEC-Ch---HHCCCCcCEEEE
Confidence            347899999999875 78888888877999999999998877776643   32   122221 21   122367999987


Q ss_pred             c-----CCC---CCChHHHHhccccCCeEEEEccC
Q 018382          251 T-----VPA---NHPLEPYLSLLKLDGKLILTGVI  277 (357)
Q Consensus       251 ~-----~g~---~~~~~~~~~~l~~~G~~v~~g~~  277 (357)
                      .     .+.   ...+..+.+.|+|+|+++.....
T Consensus       162 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~  196 (318)
T 2fk8_A          162 IEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSSV  196 (318)
T ss_dssp             ESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEEE
T ss_pred             eChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEec
Confidence            5     332   12456678899999999876543

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=96.41  E-value=0.0066  Score=52.68  Aligned_cols=69  Identities=16%  Similarity=0.108  Sum_probs=50.2

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCC--cEEEcCCChhHHHHh-------hCCccEEE
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGA--DQYLVSSDATRMQEA-------ADSLDYII  249 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~--~~vv~~~~~~~~~~~-------~~~~d~v~  249 (357)
                      +|+++||+|+ +++|++.++.+...|++|+++.+++++.      ...  ....|..+++.++.+       .+++|+++
T Consensus        10 ~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDilV   83 (261)
T 4h15_A           10 RGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEG------LPEELFVEADLTTKEGCAIVAEATRQRLGGVDVIV   83 (261)
T ss_dssp             TTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTT------SCTTTEEECCTTSHHHHHHHHHHHHHHTSSCSEEE
T ss_pred             CCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhC------CCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            7899999987 9999999999999999999999875431      221  123455565443332       24799999


Q ss_pred             EcCCC
Q 018382          250 DTVPA  254 (357)
Q Consensus       250 d~~g~  254 (357)
                      +++|.
T Consensus        84 nnAG~   88 (261)
T 4h15_A           84 HMLGG   88 (261)
T ss_dssp             ECCCC
T ss_pred             ECCCC
Confidence            98874

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=96.41  E-value=0.01  Score=51.39  Aligned_cols=74  Identities=18%  Similarity=0.104  Sum_probs=51.1

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHH-HHHHHHhc---CCc---EEEcCCChhHHHHhh-------CC
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKK-RVEAMEHL---GAD---QYLVSSDATRMQEAA-------DS  244 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~-~~~~~~~~---g~~---~vv~~~~~~~~~~~~-------~~  244 (357)
                      .++++||+|+ |++|.++++.+...|++|+++.+++.+ .+.+.+.+   +..   ...|..+.+.++++.       ++
T Consensus         6 ~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   85 (264)
T 3i4f_A            6 FVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFGK   85 (264)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             ccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            4678999987 999999999998899999998776554 33333322   221   124556654444332       37


Q ss_pred             ccEEEEcCC
Q 018382          245 LDYIIDTVP  253 (357)
Q Consensus       245 ~d~v~d~~g  253 (357)
                      +|++|+++|
T Consensus        86 id~lv~~Ag   94 (264)
T 3i4f_A           86 IDFLINNAG   94 (264)
T ss_dssp             CCEEECCCC
T ss_pred             CCEEEECCc
Confidence            999999999

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=96.40  E-value=0.012  Score=50.88  Aligned_cols=76  Identities=18%  Similarity=0.169  Sum_probs=53.3

Q ss_pred             CCCCeEEEEe-c--ChHHHHHHHHHHHcCCeEEEEeCCcHH---HHHHHHhcCCc--EEEcCCChhHHHHhh-------C
Q 018382          179 QSGLRGGILG-L--GGVGHMGVLIAKAMGHHVTVISSSDKK---RVEAMEHLGAD--QYLVSSDATRMQEAA-------D  243 (357)
Q Consensus       179 ~~~~~VlI~G-~--g~~G~~ai~la~~~g~~V~~~~~~~~~---~~~~~~~~g~~--~vv~~~~~~~~~~~~-------~  243 (357)
                      .++++|||+| +  +++|.++++.+...|++|+++++++..   .+.+.+..+..  ...|..+.+.++++.       +
T Consensus        12 ~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   91 (271)
T 3ek2_A           12 LDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKTHWD   91 (271)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHCS
T ss_pred             cCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            5688999997 3  699999999998899999999887543   33333335532  234566654443332       3


Q ss_pred             CccEEEEcCCC
Q 018382          244 SLDYIIDTVPA  254 (357)
Q Consensus       244 ~~d~v~d~~g~  254 (357)
                      ++|++|+++|.
T Consensus        92 ~id~lv~nAg~  102 (271)
T 3ek2_A           92 SLDGLVHSIGF  102 (271)
T ss_dssp             CEEEEEECCCC
T ss_pred             CCCEEEECCcc
Confidence            79999999875

>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A

Probab=96.36  E-value=0.011  Score=49.98  Aligned_cols=96  Identities=14%  Similarity=0.119  Sum_probs=64.2

Q ss_pred             CCCCCeEEEEecChHHHHHHHHHHHcC-CeEEEEeCCcHHHHHHHHhcCC--c-EEE--cCCChhHHHHhhCCccEEEEc
Q 018382          178 KQSGLRGGILGLGGVGHMGVLIAKAMG-HHVTVISSSDKKRVEAMEHLGA--D-QYL--VSSDATRMQEAADSLDYIIDT  251 (357)
Q Consensus       178 ~~~~~~VlI~G~g~~G~~ai~la~~~g-~~V~~~~~~~~~~~~~~~~~g~--~-~vv--~~~~~~~~~~~~~~~d~v~d~  251 (357)
                      ++++++||-+|+|. |..+..+++..| .+|++++.+++..+.+++....  . ..+  |..++.........+|+|+..
T Consensus        72 ~~~~~~VLDlGcG~-G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~~~  150 (230)
T 1fbn_A           72 IKRDSKILYLGASA-GTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYANIVEKVDVIYED  150 (230)
T ss_dssp             CCTTCEEEEESCCS-SHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTSCCEEEEEEC
T ss_pred             CCCCCEEEEEcccC-CHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCCcccccccCccEEEEEEe
Confidence            37889999999875 788888888876 5999999998887777664321  1 111  111111101112579999965


Q ss_pred             CCCC---C-ChHHHHhccccCCeEEEE
Q 018382          252 VPAN---H-PLEPYLSLLKLDGKLILT  274 (357)
Q Consensus       252 ~g~~---~-~~~~~~~~l~~~G~~v~~  274 (357)
                      ....   . .+..+.+.|+|+|+++..
T Consensus       151 ~~~~~~~~~~l~~~~~~LkpgG~l~i~  177 (230)
T 1fbn_A          151 VAQPNQAEILIKNAKWFLKKGGYGMIA  177 (230)
T ss_dssp             CCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             cCChhHHHHHHHHHHHhCCCCcEEEEE
Confidence            5443   1 266788899999998875

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=96.36  E-value=0.0078  Score=52.42  Aligned_cols=76  Identities=14%  Similarity=0.112  Sum_probs=51.8

Q ss_pred             CCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEE-eCCcHHHHHHHHh---cCCcE---EEcCCChhHHHHhh-------C
Q 018382          179 QSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVI-SSSDKKRVEAMEH---LGADQ---YLVSSDATRMQEAA-------D  243 (357)
Q Consensus       179 ~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~-~~~~~~~~~~~~~---~g~~~---vv~~~~~~~~~~~~-------~  243 (357)
                      ..++++||+|+ |++|.++++.+...|++|+++ .+++++.+.+.+.   .+...   ..|..+.+.++++.       +
T Consensus        24 ~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  103 (272)
T 4e3z_A           24 SDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFG  103 (272)
T ss_dssp             CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            45678999987 999999999999999999887 5665555444332   34321   23555554433322       3


Q ss_pred             CccEEEEcCCC
Q 018382          244 SLDYIIDTVPA  254 (357)
Q Consensus       244 ~~d~v~d~~g~  254 (357)
                      ++|++|+++|.
T Consensus       104 ~id~li~nAg~  114 (272)
T 4e3z_A          104 RLDGLVNNAGI  114 (272)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999885

>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17

Probab=96.35  E-value=0.0095  Score=52.12  Aligned_cols=94  Identities=16%  Similarity=0.102  Sum_probs=63.8

Q ss_pred             CCCeEEEEecChHHHHHHHHHHHcC-CeEEEEeCCcHHHHHHHHhc-----CC----cEEEcCCChhHHHHhhCCccEEE
Q 018382          180 SGLRGGILGLGGVGHMGVLIAKAMG-HHVTVISSSDKKRVEAMEHL-----GA----DQYLVSSDATRMQEAADSLDYII  249 (357)
Q Consensus       180 ~~~~VlI~G~g~~G~~ai~la~~~g-~~V~~~~~~~~~~~~~~~~~-----g~----~~vv~~~~~~~~~~~~~~~d~v~  249 (357)
                      ..++||++|+|. |..+..+++..+ .+|+++..+++-.+.+++.+     +.    -.++..+..+.+....+.+|+|+
T Consensus        75 ~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii  153 (275)
T 1iy9_A           75 NPEHVLVVGGGD-GGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIM  153 (275)
T ss_dssp             SCCEEEEESCTT-CHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEE
T ss_pred             CCCEEEEECCch-HHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEE
Confidence            468999998753 555667777666 49999999988887777755     21    23343333344444445899997


Q ss_pred             EcCCC----------CCChHHHHhccccCCeEEEE
Q 018382          250 DTVPA----------NHPLEPYLSLLKLDGKLILT  274 (357)
Q Consensus       250 d~~g~----------~~~~~~~~~~l~~~G~~v~~  274 (357)
                      --...          ...+..+.+.|+++|.++..
T Consensus       154 ~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~  188 (275)
T 1iy9_A          154 VDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQ  188 (275)
T ss_dssp             ESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEE
T ss_pred             ECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence            54322          22567888999999999876

>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21

Probab=96.35  E-value=0.0094  Score=51.15  Aligned_cols=95  Identities=22%  Similarity=0.163  Sum_probs=63.9

Q ss_pred             CCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCC---cEEEcCCChhHHHHhhCCccEEEEc
Q 018382          178 KQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGA---DQYLVSSDATRMQEAADSLDYIIDT  251 (357)
Q Consensus       178 ~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~---~~vv~~~~~~~~~~~~~~~d~v~d~  251 (357)
                      +.++.+||-+|+|. |..+..+++..+.+|++++.++...+.+++.   .|.   ..++..+-.+. .. .+.+|+|+..
T Consensus        34 ~~~~~~VLDiGcG~-G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~-~~-~~~fD~V~~~  110 (256)
T 1nkv_A           34 MKPGTRILDLGSGS-GEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGY-VA-NEKCDVAACV  110 (256)
T ss_dssp             CCTTCEEEEETCTT-CHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTC-CC-SSCEEEEEEE
T ss_pred             CCCCCEEEEECCCC-CHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhC-Cc-CCCCCEEEEC
Confidence            47899999999865 7778888888899999999998877666553   342   12222211111 11 3579999852


Q ss_pred             CC-----C-CCChHHHHhccccCCeEEEEc
Q 018382          252 VP-----A-NHPLEPYLSLLKLDGKLILTG  275 (357)
Q Consensus       252 ~g-----~-~~~~~~~~~~l~~~G~~v~~g  275 (357)
                      ..     . ...+..+.+.|+|+|+++...
T Consensus       111 ~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~  140 (256)
T 1nkv_A          111 GATWIAGGFAGAEELLAQSLKPGGIMLIGE  140 (256)
T ss_dssp             SCGGGTSSSHHHHHHHTTSEEEEEEEEEEE
T ss_pred             CChHhcCCHHHHHHHHHHHcCCCeEEEEec
Confidence            21     1 123677888999999988754

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=96.35  E-value=0.0035  Score=57.18  Aligned_cols=75  Identities=15%  Similarity=0.059  Sum_probs=55.2

Q ss_pred             CCeEEEEec-ChHHHHHHHHHHHc-CCeEEEEeCCcHHHHHHHHhcCCcE-EEcCC-ChhHHHHhhCCccEEEEcCCCC
Q 018382          181 GLRGGILGL-GGVGHMGVLIAKAM-GHHVTVISSSDKKRVEAMEHLGADQ-YLVSS-DATRMQEAADSLDYIIDTVPAN  255 (357)
Q Consensus       181 ~~~VlI~G~-g~~G~~ai~la~~~-g~~V~~~~~~~~~~~~~~~~~g~~~-vv~~~-~~~~~~~~~~~~d~v~d~~g~~  255 (357)
                      ..+|||+|+ |.+|..+++.+... |.+|++++++.++...+.+.-+... ..|.. +.+.+.++..++|+||.+++..
T Consensus        24 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~~~~~d~Vih~A~~~  102 (372)
T 3slg_A           24 AKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEYHVKKCDVILPLVAIA  102 (372)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHHHHHCSEEEECBCCC
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHHHhccCCEEEEcCccc
Confidence            468999987 99999999988877 8999999998776544433123322 23555 6666666666899999988754

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=96.35  E-value=0.015  Score=52.52  Aligned_cols=89  Identities=16%  Similarity=0.124  Sum_probs=60.8

Q ss_pred             CCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCc----HHHHHHHH--hcCCcEE-EcCCChhHHHHhhC--CccEEEE
Q 018382          181 GLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSD----KKRVEAME--HLGADQY-LVSSDATRMQEAAD--SLDYIID  250 (357)
Q Consensus       181 ~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~----~~~~~~~~--~~g~~~v-v~~~~~~~~~~~~~--~~d~v~d  250 (357)
                      ..+|||+|+ |.+|..+++.+...|.+|++++++.    ++...+.+  ..+...+ .|..+.+.+.++..  ++|+||.
T Consensus        10 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vi~   89 (346)
T 3i6i_A           10 KGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEHEIDIVVS   89 (346)
T ss_dssp             -CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHTTCCEEEE
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhCCCCEEEE
Confidence            358999998 9999999999988899999999976    44432222  1354432 46666666676666  9999999


Q ss_pred             cCCCCC--ChHHHHhccccCC
Q 018382          251 TVPANH--PLEPYLSLLKLDG  269 (357)
Q Consensus       251 ~~g~~~--~~~~~~~~l~~~G  269 (357)
                      +++...  ....+++.++..|
T Consensus        90 ~a~~~n~~~~~~l~~aa~~~g  110 (346)
T 3i6i_A           90 TVGGESILDQIALVKAMKAVG  110 (346)
T ss_dssp             CCCGGGGGGHHHHHHHHHHHC
T ss_pred             CCchhhHHHHHHHHHHHHHcC
Confidence            998631  2234444444444

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=96.35  E-value=0.0079  Score=54.23  Aligned_cols=70  Identities=14%  Similarity=0.116  Sum_probs=53.0

Q ss_pred             CCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcE-EEcCCChhHHHHhhCCccEEEEcCCCC
Q 018382          179 QSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQ-YLVSSDATRMQEAADSLDYIIDTVPAN  255 (357)
Q Consensus       179 ~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~~~~d~v~d~~g~~  255 (357)
                      .++.+|||+|+ |.+|..+++.+...|.+|+++++++.+       .+... ..|..+.+.+.++..++|+||.+++..
T Consensus        17 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-------~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~~~   88 (347)
T 4id9_A           17 RGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG-------TGGEEVVGSLEDGQALSDAIMGVSAVLHLGAFM   88 (347)
T ss_dssp             ----CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS-------SCCSEEESCTTCHHHHHHHHTTCSEEEECCCCC
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC-------CCccEEecCcCCHHHHHHHHhCCCEEEECCccc
Confidence            45678999987 999999999999999999999988654       23332 346667777777777999999998753

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=96.33  E-value=0.0057  Score=55.60  Aligned_cols=76  Identities=12%  Similarity=0.051  Sum_probs=53.2

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHH--cCCeEEEEeCCcHHHHH----------HHH--hcCCc-EEEcCCChhHHHHh-h
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKA--MGHHVTVISSSDKKRVE----------AME--HLGAD-QYLVSSDATRMQEA-A  242 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~--~g~~V~~~~~~~~~~~~----------~~~--~~g~~-~vv~~~~~~~~~~~-~  242 (357)
                      .+.+|||+|+ |.+|..+++.+..  .|.+|++++++......          ...  ..+.. ...|..+.+.++++ .
T Consensus         9 ~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   88 (362)
T 3sxp_A            9 ENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRRLEK   88 (362)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHHHTT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHHhhc
Confidence            5689999987 9999999988888  89999999986541100          001  01122 23466667777777 6


Q ss_pred             CCccEEEEcCCCC
Q 018382          243 DSLDYIIDTVPAN  255 (357)
Q Consensus       243 ~~~d~v~d~~g~~  255 (357)
                      .++|+||++++..
T Consensus        89 ~~~D~vih~A~~~  101 (362)
T 3sxp_A           89 LHFDYLFHQAAVS  101 (362)
T ss_dssp             SCCSEEEECCCCC
T ss_pred             cCCCEEEECCccC
Confidence            7999999999853

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=96.32  E-value=0.0099  Score=51.66  Aligned_cols=75  Identities=17%  Similarity=0.157  Sum_probs=50.7

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEe-CCcHHHHHHHH---hcCCc---EEEcCCChhHHHHhh-------CC
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVIS-SSDKKRVEAME---HLGAD---QYLVSSDATRMQEAA-------DS  244 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~-~~~~~~~~~~~---~~g~~---~vv~~~~~~~~~~~~-------~~  244 (357)
                      .++++||+|+ |++|.++++.+...|++|+++. ++.++.+...+   ..+..   ...|..+.+.++++.       ++
T Consensus        24 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~  103 (269)
T 3gk3_A           24 AKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADFGK  103 (269)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             cCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            5678899987 9999999999998999999988 44444333222   12321   224566654433322       37


Q ss_pred             ccEEEEcCCC
Q 018382          245 LDYIIDTVPA  254 (357)
Q Consensus       245 ~d~v~d~~g~  254 (357)
                      +|++|+++|.
T Consensus       104 id~li~nAg~  113 (269)
T 3gk3_A          104 VDVLINNAGI  113 (269)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCc
Confidence            9999999885

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=96.32  E-value=0.0051  Score=55.11  Aligned_cols=76  Identities=18%  Similarity=0.226  Sum_probs=51.7

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCC----------cHHHHHHHHh---cCCcEE---EcCCChhHHHHhh
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSS----------DKKRVEAMEH---LGADQY---LVSSDATRMQEAA  242 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~----------~~~~~~~~~~---~g~~~v---v~~~~~~~~~~~~  242 (357)
                      .++++||+|+ +++|.++++.+...|++|++++++          .++.+.+.+.   .|....   .|..+.+.++++.
T Consensus        26 ~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~  105 (322)
T 3qlj_A           26 DGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGLI  105 (322)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHH
Confidence            5788999987 999999999998899999999876          3443333222   343222   2445544433322


Q ss_pred             -------CCccEEEEcCCCC
Q 018382          243 -------DSLDYIIDTVPAN  255 (357)
Q Consensus       243 -------~~~d~v~d~~g~~  255 (357)
                             +++|++|+++|..
T Consensus       106 ~~~~~~~g~iD~lv~nAg~~  125 (322)
T 3qlj_A          106 QTAVETFGGLDVLVNNAGIV  125 (322)
T ss_dssp             HHHHHHHSCCCEEECCCCCC
T ss_pred             HHHHHHcCCCCEEEECCCCC
Confidence                   3799999999853

>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}

Probab=96.30  E-value=0.038  Score=49.21  Aligned_cols=93  Identities=19%  Similarity=0.135  Sum_probs=64.4

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHc-CC-eEEEEeCCcHHHHHHHHhcCC-cEEEcCCChhHHHHhhCCccEEEEcCCCC
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAM-GH-HVTVISSSDKKRVEAMEHLGA-DQYLVSSDATRMQEAADSLDYIIDTVPAN  255 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~-g~-~V~~~~~~~~~~~~~~~~~g~-~~vv~~~~~~~~~~~~~~~d~v~d~~g~~  255 (357)
                      ....++.|+|+|.+|...++.+... |. +|.+..+++++.+.+.+.++. -..  ..+   .++.....|+|+.++...
T Consensus       133 ~~~~~igiIG~G~~g~~~a~~l~~~~g~~~V~v~dr~~~~~~~l~~~~~~~~~~--~~~---~~e~v~~aDiVi~atp~~  207 (312)
T 2i99_A          133 PSSEVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNRTKENAEKFADTVQGEVRV--CSS---VQEAVAGADVIITVTLAT  207 (312)
T ss_dssp             TTCCEEEEECCSHHHHHHHHHHHHHCCCSEEEEECSSHHHHHHHHHHSSSCCEE--CSS---HHHHHTTCSEEEECCCCS
T ss_pred             CCCcEEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHhhCCeEE--eCC---HHHHHhcCCEEEEEeCCC
Confidence            4567899999999999988777654 87 899999999888888776773 122  112   334445789999998764


Q ss_pred             CChHHHHhccccCCeEEEEccC
Q 018382          256 HPLEPYLSLLKLDGKLILTGVI  277 (357)
Q Consensus       256 ~~~~~~~~~l~~~G~~v~~g~~  277 (357)
                      ..+-.. ..++++-.++.++..
T Consensus       208 ~~v~~~-~~l~~g~~vi~~g~~  228 (312)
T 2i99_A          208 EPILFG-EWVKPGAHINAVGAS  228 (312)
T ss_dssp             SCCBCG-GGSCTTCEEEECCCC
T ss_pred             CcccCH-HHcCCCcEEEeCCCC
Confidence            221111 567777777777544

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=96.30  E-value=0.02  Score=51.73  Aligned_cols=75  Identities=12%  Similarity=0.044  Sum_probs=54.3

Q ss_pred             CCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcH----HHHHHHHhc------CCcE-EEcCCChhHHHHhhCCccEE
Q 018382          181 GLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDK----KRVEAMEHL------GADQ-YLVSSDATRMQEAADSLDYI  248 (357)
Q Consensus       181 ~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~----~~~~~~~~~------g~~~-vv~~~~~~~~~~~~~~~d~v  248 (357)
                      +.+|||+|+ |.+|..+++.+...|.+|++++++..    +...+.+.+      +... ..|..+.+.+.++..++|+|
T Consensus        27 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~v  106 (352)
T 1sb8_A           27 PKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVDYV  106 (352)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCSEE
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhcCCCEE
Confidence            568999987 99999999999888999999998653    333333222      2221 23556666677777799999


Q ss_pred             EEcCCCC
Q 018382          249 IDTVPAN  255 (357)
Q Consensus       249 ~d~~g~~  255 (357)
                      |.+++..
T Consensus       107 ih~A~~~  113 (352)
T 1sb8_A          107 LHQAALG  113 (352)
T ss_dssp             EECCSCC
T ss_pred             EECCccc
Confidence            9999854

>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}

Probab=96.30  E-value=0.04  Score=49.37  Aligned_cols=132  Identities=14%  Similarity=0.109  Sum_probs=74.7

Q ss_pred             eEEEEecChHHHHH-HHHHHHcCCeEEE-EeCCcHHHHHHHHhcCCcEEEcCCChhHHHHh-h-CCccEEEEcCCCCCCh
Q 018382          183 RGGILGLGGVGHMG-VLIAKAMGHHVTV-ISSSDKKRVEAMEHLGADQYLVSSDATRMQEA-A-DSLDYIIDTVPANHPL  258 (357)
Q Consensus       183 ~VlI~G~g~~G~~a-i~la~~~g~~V~~-~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~-~-~~~d~v~d~~g~~~~~  258 (357)
                      +|.|+|+|.+|... +..+...+.++++ .++++++.+.+.+++|...++  .+   .+++ . ..+|+|+.++......
T Consensus         2 ~vgiiG~G~~g~~~~~~~l~~~~~~~vav~d~~~~~~~~~~~~~g~~~~~--~~---~~~~l~~~~~D~V~i~tp~~~h~   76 (332)
T 2glx_A            2 RWGLIGASTIAREWVIGAIRATGGEVVSMMSTSAERGAAYATENGIGKSV--TS---VEELVGDPDVDAVYVSTTNELHR   76 (332)
T ss_dssp             EEEEESCCHHHHHTHHHHHHHTTCEEEEEECSCHHHHHHHHHHTTCSCCB--SC---HHHHHTCTTCCEEEECSCGGGHH
T ss_pred             eEEEEcccHHHHHhhhHHhhcCCCeEEEEECCCHHHHHHHHHHcCCCccc--CC---HHHHhcCCCCCEEEEeCChhHhH
Confidence            58899999999886 6444447788764 456666766666668864222  22   2233 2 2699999999887455


Q ss_pred             HHHHhccccCCeEEEEccCCCCcccc---hHHH-hhccceEEEEeecCH-HHHHHHHHHHHhcCCCc
Q 018382          259 EPYLSLLKLDGKLILTGVINTPMQFL---TPMV-MLGRKAITGSFIGSM-KETKEMLEFCREKGVTS  320 (357)
Q Consensus       259 ~~~~~~l~~~G~~v~~g~~~~~~~~~---~~~~-~~~~~~i~g~~~~~~-~~~~~~~~~~~~~~l~~  320 (357)
                      ..+..+++. |+-|.+.-+.....-.   +... -.++..+.-....+. ..++.+.+++.+|.+-.
T Consensus        77 ~~~~~al~~-Gk~v~~ekP~~~~~~~~~~l~~~a~~~g~~~~~~~~~r~~p~~~~~~~~i~~g~iG~  142 (332)
T 2glx_A           77 EQTLAAIRA-GKHVLCEKPLAMTLEDAREMVVAAREAGVVLGTNHHLRNAAAHRAMRDAIAEGRIGR  142 (332)
T ss_dssp             HHHHHHHHT-TCEEEECSSSCSSHHHHHHHHHHHHHHTCCEEECCCGGGSHHHHHHHHHHHTTTTSS
T ss_pred             HHHHHHHHC-CCeEEEeCCCcCCHHHHHHHHHHHHHcCCEEEEeehhhcCHHHHHHHHHHHcCCCCC
Confidence            666667766 4545554322111111   1111 122333322222222 44677777777777654

>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}

Probab=96.29  E-value=0.058  Score=48.85  Aligned_cols=133  Identities=12%  Similarity=0.057  Sum_probs=79.8

Q ss_pred             CeEEEEecChHHHHHHHHHHHc-CCeEEEE-eCCcHHHHHHHHhcCCcEEEcCCChhHHHHhh--CCccEEEEcCCCCCC
Q 018382          182 LRGGILGLGGVGHMGVLIAKAM-GHHVTVI-SSSDKKRVEAMEHLGADQYLVSSDATRMQEAA--DSLDYIIDTVPANHP  257 (357)
Q Consensus       182 ~~VlI~G~g~~G~~ai~la~~~-g~~V~~~-~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~--~~~d~v~d~~g~~~~  257 (357)
                      -+|.|+|+|.+|...+..++.. +++++++ ++++++.+.+.+++|...   +.+.   +++.  ..+|+|+.|+.....
T Consensus         6 ~~vgiiG~G~~g~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~g~~~---~~~~---~~~l~~~~~D~V~i~tp~~~h   79 (354)
T 3db2_A            6 VGVAAIGLGRWAYVMADAYTKSEKLKLVTCYSRTEDKREKFGKRYNCAG---DATM---EALLAREDVEMVIITVPNDKH   79 (354)
T ss_dssp             EEEEEECCSHHHHHHHHHHTTCSSEEEEEEECSSHHHHHHHHHHHTCCC---CSSH---HHHHHCSSCCEEEECSCTTSH
T ss_pred             ceEEEEccCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCCC---cCCH---HHHhcCCCCCEEEEeCChHHH
Confidence            4689999999999888877766 6787654 566667666666688643   2232   2232  479999999998756


Q ss_pred             hHHHHhccccCCeEEEEccCCCCcccc---hHHH-hhccceEEEEeec-CHHHHHHHHHHHHhcCCCcc
Q 018382          258 LEPYLSLLKLDGKLILTGVINTPMQFL---TPMV-MLGRKAITGSFIG-SMKETKEMLEFCREKGVTSM  321 (357)
Q Consensus       258 ~~~~~~~l~~~G~~v~~g~~~~~~~~~---~~~~-~~~~~~i~g~~~~-~~~~~~~~~~~~~~~~l~~~  321 (357)
                      ...+..+++.+-. |.+.-+.....-.   +... -.++..+.-.+.. -...++.+-+++++|.+-.+
T Consensus        80 ~~~~~~al~~gk~-vl~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~~R~~p~~~~~k~~i~~g~iG~i  147 (354)
T 3db2_A           80 AEVIEQCARSGKH-IYVEKPISVSLDHAQRIDQVIKETGVKFLCGHSSRRLGALRKMKEMIDTKEIGEV  147 (354)
T ss_dssp             HHHHHHHHHTTCE-EEEESSSCSSHHHHHHHHHHHHHHCCCEEEECGGGGSHHHHHHHHHHHTTTTCCE
T ss_pred             HHHHHHHHHcCCE-EEEccCCCCCHHHHHHHHHHHHHcCCeEEEeechhcCHHHHHHHHHHhcCCCCCe
Confidence            6667777766544 5554432211111   1111 1223333322222 22456777788888877654

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=96.29  E-value=0.016  Score=51.61  Aligned_cols=91  Identities=19%  Similarity=0.177  Sum_probs=62.6

Q ss_pred             CeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcH-HHHHHH--HhcCCcE-EEcCCChhHHHHhhCCccEEEEcCCCC-
Q 018382          182 LRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDK-KRVEAM--EHLGADQ-YLVSSDATRMQEAADSLDYIIDTVPAN-  255 (357)
Q Consensus       182 ~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~-~~~~~~--~~~g~~~-vv~~~~~~~~~~~~~~~d~v~d~~g~~-  255 (357)
                      ++|||+|+ |.+|..+++.+...|.+|++++++.. +...+.  +..|... ..|..+.+.+.+...++|+||.+++.. 
T Consensus        12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~~~d~vi~~a~~~~   91 (318)
T 2r6j_A           12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVELMKKVDVVISALAFPQ   91 (318)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCCGGG
T ss_pred             CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHHHcCCCEEEECCchhh
Confidence            47999997 99999999999888999999998764 332221  1245443 246677777777778999999998753 


Q ss_pred             -CChHHHHhccccC---CeEE
Q 018382          256 -HPLEPYLSLLKLD---GKLI  272 (357)
Q Consensus       256 -~~~~~~~~~l~~~---G~~v  272 (357)
                       .....+++.++..   .+++
T Consensus        92 ~~~~~~l~~aa~~~g~v~~~v  112 (318)
T 2r6j_A           92 ILDQFKILEAIKVAGNIKRFL  112 (318)
T ss_dssp             STTHHHHHHHHHHHCCCCEEE
T ss_pred             hHHHHHHHHHHHhcCCCCEEE
Confidence             1233444444433   3665

>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}

Probab=96.26  E-value=0.011  Score=53.22  Aligned_cols=87  Identities=25%  Similarity=0.305  Sum_probs=62.5

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCC---
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPAN---  255 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~---  255 (357)
                      -.|.+|.|+|.|.+|..+++.++..|.+|++.+++.++ +...+ +|...  .  +   +.++....|+|+.++...   
T Consensus       144 l~g~~vgIIG~G~iG~~vA~~l~~~G~~V~~~d~~~~~-~~~~~-~g~~~--~--~---l~e~l~~aDiVil~vp~~~~t  214 (333)
T 2d0i_A          144 LYGKKVGILGMGAIGKAIARRLIPFGVKLYYWSRHRKV-NVEKE-LKARY--M--D---IDELLEKSDIVILALPLTRDT  214 (333)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCCH-HHHHH-HTEEE--C--C---HHHHHHHCSEEEECCCCCTTT
T ss_pred             CCcCEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcch-hhhhh-cCcee--c--C---HHHHHhhCCEEEEcCCCChHH
Confidence            45789999999999999999999999999999988776 44444 66432  1  2   223334689999888764   


Q ss_pred             -CChH-HHHhccccCCeEEEEc
Q 018382          256 -HPLE-PYLSLLKLDGKLILTG  275 (357)
Q Consensus       256 -~~~~-~~~~~l~~~G~~v~~g  275 (357)
                       ..+. ..++.|+++ .++.++
T Consensus       215 ~~~i~~~~~~~mk~g-ilin~s  235 (333)
T 2d0i_A          215 YHIINEERVKKLEGK-YLVNIG  235 (333)
T ss_dssp             TTSBCHHHHHHTBTC-EEEECS
T ss_pred             HHHhCHHHHhhCCCC-EEEECC
Confidence             1232 356778888 776664

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=96.26  E-value=0.012  Score=50.88  Aligned_cols=75  Identities=15%  Similarity=0.099  Sum_probs=52.4

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHH---cCCeEEEEeCCcHHHHHHHHhc-----CCcE---EEcCCChhHHHH----hh-
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKA---MGHHVTVISSSDKKRVEAMEHL-----GADQ---YLVSSDATRMQE----AA-  242 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~---~g~~V~~~~~~~~~~~~~~~~~-----g~~~---vv~~~~~~~~~~----~~-  242 (357)
                      .++++||+|+ |++|.++++.+..   .|++|+++++++++.+.+.+.+     +...   ..|..+++.+++    +. 
T Consensus         5 ~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   84 (259)
T 1oaa_A            5 GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRE   84 (259)
T ss_dssp             BSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHHHh
Confidence            4678899987 9999998888877   7999999999988766554433     3221   235556543332    22 


Q ss_pred             ----CCcc--EEEEcCCC
Q 018382          243 ----DSLD--YIIDTVPA  254 (357)
Q Consensus       243 ----~~~d--~v~d~~g~  254 (357)
                          +.+|  ++++++|.
T Consensus        85 ~~~~g~~d~~~lvnnAg~  102 (259)
T 1oaa_A           85 LPRPEGLQRLLLINNAAT  102 (259)
T ss_dssp             SCCCTTCCEEEEEECCCC
T ss_pred             ccccccCCccEEEECCcc
Confidence                2578  99999874

>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B

Probab=96.26  E-value=0.0098  Score=53.92  Aligned_cols=90  Identities=20%  Similarity=0.299  Sum_probs=65.3

Q ss_pred             CCCCeEEEEecChHHHHHHHHHH-HcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCC-
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAK-AMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANH-  256 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~-~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~-  256 (357)
                      -.|++|.|+|.|.+|..+++.++ ..|.+|++.+++.++.+...+ +|...+   .+   +.++....|+|+.++.... 
T Consensus       161 l~g~~vgIIG~G~IG~~vA~~l~~~~G~~V~~~d~~~~~~~~~~~-~g~~~~---~~---l~ell~~aDvVil~vp~~~~  233 (348)
T 2w2k_A          161 PRGHVLGAVGLGAIQKEIARKAVHGLGMKLVYYDVAPADAETEKA-LGAERV---DS---LEELARRSDCVSVSVPYMKL  233 (348)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHH-HTCEEC---SS---HHHHHHHCSEEEECCCCSGG
T ss_pred             CCCCEEEEEEECHHHHHHHHHHHHhcCCEEEEECCCCcchhhHhh-cCcEEe---CC---HHHHhccCCEEEEeCCCChH
Confidence            46789999999999999999999 999999999988766555544 675421   12   2333446899999886531 


Q ss_pred             ---Ch-HHHHhccccCCeEEEEc
Q 018382          257 ---PL-EPYLSLLKLDGKLILTG  275 (357)
Q Consensus       257 ---~~-~~~~~~l~~~G~~v~~g  275 (357)
                         .+ ...++.|+++..++.++
T Consensus       234 t~~li~~~~l~~mk~gailin~s  256 (348)
T 2w2k_A          234 THHLIDEAFFAAMKPGSRIVNTA  256 (348)
T ss_dssp             GTTCBCHHHHHHSCTTEEEEECS
T ss_pred             HHHHhhHHHHhcCCCCCEEEECC
Confidence               22 34667788888777664

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=96.26  E-value=0.016  Score=51.20  Aligned_cols=75  Identities=21%  Similarity=0.214  Sum_probs=54.3

Q ss_pred             CCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCc------HHHHHHHH--hcCCcEE-EcCCChhHHHHhhCCccEEEE
Q 018382          181 GLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSD------KKRVEAME--HLGADQY-LVSSDATRMQEAADSLDYIID  250 (357)
Q Consensus       181 ~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~------~~~~~~~~--~~g~~~v-v~~~~~~~~~~~~~~~d~v~d  250 (357)
                      ..+|||+|+ |.+|..+++.+...|.+|++++++.      ++.+.+.+  ..|...+ .|..+++.+.+...++|+||.
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~   83 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVIS   83 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEEE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHcCCCEEEE
Confidence            467999997 9999999999988899999999873      23322222  2344332 466666666666678999999


Q ss_pred             cCCCC
Q 018382          251 TVPAN  255 (357)
Q Consensus       251 ~~g~~  255 (357)
                      +++..
T Consensus        84 ~a~~~   88 (308)
T 1qyc_A           84 TVGSL   88 (308)
T ss_dssp             CCCGG
T ss_pred             CCcch
Confidence            98863

>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A

Probab=96.24  E-value=0.011  Score=53.09  Aligned_cols=88  Identities=20%  Similarity=0.257  Sum_probs=63.8

Q ss_pred             CCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCC----
Q 018382          180 SGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPAN----  255 (357)
Q Consensus       180 ~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~----  255 (357)
                      .|.+|.|+|.|.+|..+++.++..|.+|++.+++.++.+.+.+ +|....    +   +.++....|+|+.++...    
T Consensus       154 ~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~-~g~~~~----~---l~e~l~~aDvVi~~vp~~~~t~  225 (330)
T 2gcg_A          154 TQSTVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQPRPEEAAE-FQAEFV----S---TPELAAQSDFIVVACSLTPATE  225 (330)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHGGGTCCEEEEESSSCCHHHHHT-TTCEEC----C---HHHHHHHCSEEEECCCCCTTTT
T ss_pred             CCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcchhHHHh-cCceeC----C---HHHHHhhCCEEEEeCCCChHHH
Confidence            5789999999999999999999999999999987665554444 665321    1   223334689999988653    


Q ss_pred             CCh-HHHHhccccCCeEEEEc
Q 018382          256 HPL-EPYLSLLKLDGKLILTG  275 (357)
Q Consensus       256 ~~~-~~~~~~l~~~G~~v~~g  275 (357)
                      ..+ ...++.|+++..++.++
T Consensus       226 ~~i~~~~~~~mk~gailIn~s  246 (330)
T 2gcg_A          226 GLCNKDFFQKMKETAVFINIS  246 (330)
T ss_dssp             TCBSHHHHHHSCTTCEEEECS
T ss_pred             HhhCHHHHhcCCCCcEEEECC
Confidence            123 35667888888887664

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=96.24  E-value=0.0062  Score=50.44  Aligned_cols=71  Identities=20%  Similarity=0.222  Sum_probs=51.5

Q ss_pred             CeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEE--EcCCChhHHHHhhC---CccEEEEcCCCC
Q 018382          182 LRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQY--LVSSDATRMQEAAD---SLDYIIDTVPAN  255 (357)
Q Consensus       182 ~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~v--v~~~~~~~~~~~~~---~~d~v~d~~g~~  255 (357)
                      +++||+|+ |++|..+++.+...  +|+++++++++.+.+.+.++. ..  .|..+++.++++..   ++|++|+++|..
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~~   77 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVGA-RALPADLADELEAKALLEEAGPLDLLVHAVGKA   77 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHTC-EECCCCTTSHHHHHHHHHHHCSEEEEEECCCCC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhccC-cEEEeeCCCHHHHHHHHHhcCCCCEEEECCCcC
Confidence            36899987 99999888877655  999999998877766654543 33  35555555555443   899999998753

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=96.24  E-value=0.003  Score=54.33  Aligned_cols=71  Identities=15%  Similarity=0.145  Sum_probs=51.2

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhh-------CCccEEEEc
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAA-------DSLDYIIDT  251 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~-------~~~d~v~d~  251 (357)
                      .++++||+|+ |++|.++++.+...|++|+++++++++.+.+.   +  ...|..+.+.++++.       +++|+++++
T Consensus        14 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~---~--~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~   88 (247)
T 1uzm_A           14 VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLF---G--VEVDVTDSDAVDRAFTAVEEHQGPVEVLVSN   88 (247)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTSE---E--EECCTTCHHHHHHHHHHHHHHHSSCSEEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHhc---C--eeccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            4678999987 99999999999889999999998765432211   1  345666655443332       378999999


Q ss_pred             CCCC
Q 018382          252 VPAN  255 (357)
Q Consensus       252 ~g~~  255 (357)
                      +|..
T Consensus        89 Ag~~   92 (247)
T 1uzm_A           89 AGLS   92 (247)
T ss_dssp             CSCC
T ss_pred             CCCC
Confidence            8853

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=96.24  E-value=0.0063  Score=52.50  Aligned_cols=69  Identities=13%  Similarity=0.063  Sum_probs=49.7

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCc-EEEcCCChhHHHHhh-------CCccEEEE
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGAD-QYLVSSDATRMQEAA-------DSLDYIID  250 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~~~-------~~~d~v~d  250 (357)
                      .++++||+|+ |++|.++++.+...|++|+++++++++.+.      .. ...|..+++.++++.       +++|++++
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~------~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lv~   93 (253)
T 2nm0_A           20 MSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPEG------FLAVKCDITDTEQVEQAYKEIEETHGPVEVLIA   93 (253)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTT------SEEEECCTTSHHHHHHHHHHHHHHTCSCSEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhcc------ceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            4678999987 999999999998899999999987654321      11 224566654443322       36899999


Q ss_pred             cCCC
Q 018382          251 TVPA  254 (357)
Q Consensus       251 ~~g~  254 (357)
                      ++|.
T Consensus        94 nAg~   97 (253)
T 2nm0_A           94 NAGV   97 (253)
T ss_dssp             ECSC
T ss_pred             CCCC
Confidence            9875

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=96.22  E-value=0.0044  Score=55.60  Aligned_cols=76  Identities=21%  Similarity=0.169  Sum_probs=52.9

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcC-Cc-EEEcCCChhHHHHhhC--CccEEEEcCCC
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLG-AD-QYLVSSDATRMQEAAD--SLDYIIDTVPA  254 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g-~~-~vv~~~~~~~~~~~~~--~~d~v~d~~g~  254 (357)
                      .+.+|||+|+ |.+|..+++.+...|.+|++++++........+.+. .. ...|..+.+.+.++..  ++|+||++++.
T Consensus        19 ~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~~~~~~~D~vih~A~~   98 (330)
T 2pzm_A           19 SHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLERAFDSFKPTHVVHSAAA   98 (330)
T ss_dssp             TCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECCCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHHHHhhcCCCEEEECCcc
Confidence            4678999987 999999999988889999999986443211111122 11 1235566666666655  89999999986


Q ss_pred             C
Q 018382          255 N  255 (357)
Q Consensus       255 ~  255 (357)
                      .
T Consensus        99 ~   99 (330)
T 2pzm_A           99 Y   99 (330)
T ss_dssp             C
T ss_pred             C
Confidence            4

>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*

Probab=96.21  E-value=0.012  Score=50.70  Aligned_cols=93  Identities=22%  Similarity=0.149  Sum_probs=60.2

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCC---------------------c-EEEcCCChh
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGA---------------------D-QYLVSSDAT  236 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~---------------------~-~vv~~~~~~  236 (357)
                      .++.+||.+|+|. |..+..|++. |.+|++++.++...+.++++.+.                     . .++.. +..
T Consensus        67 ~~~~~vLD~GCG~-G~~~~~La~~-G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-D~~  143 (252)
T 2gb4_A           67 QSGLRVFFPLCGK-AIEMKWFADR-GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCC-SIF  143 (252)
T ss_dssp             CCSCEEEETTCTT-CTHHHHHHHT-TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEES-CTT
T ss_pred             CCCCeEEEeCCCC-cHHHHHHHHC-CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEEC-ccc
Confidence            5788999998853 6666777765 89999999999988888664531                     1 11111 111


Q ss_pred             HHHHh-hCCccEEEEcCCC-----C---CChHHHHhccccCCeEEEE
Q 018382          237 RMQEA-ADSLDYIIDTVPA-----N---HPLEPYLSLLKLDGKLILT  274 (357)
Q Consensus       237 ~~~~~-~~~~d~v~d~~g~-----~---~~~~~~~~~l~~~G~~v~~  274 (357)
                      .+... .+.||+|++...-     .   ..+..+.+.|+|+|+++.+
T Consensus       144 ~l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~  190 (252)
T 2gb4_A          144 DLPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVA  190 (252)
T ss_dssp             TGGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEE
T ss_pred             cCCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence            11111 1579999974321     1   1245677899999998654

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=96.21  E-value=0.022  Score=51.69  Aligned_cols=97  Identities=15%  Similarity=0.065  Sum_probs=63.7

Q ss_pred             CCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHH--HHHHHhcCCcE-EEc-CCChhHHHHhhCCccEEEEcCCCC
Q 018382          181 GLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKR--VEAMEHLGADQ-YLV-SSDATRMQEAADSLDYIIDTVPAN  255 (357)
Q Consensus       181 ~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~--~~~~~~~g~~~-vv~-~~~~~~~~~~~~~~d~v~d~~g~~  255 (357)
                      +.+|||+|+ |.+|..+++.+...|.+|++++++.++.  ..+....+... ..| ..+++.+.+...++|+||.+++..
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~~~~~v~~v~~D~l~d~~~l~~~~~~~d~Vi~~a~~~   84 (352)
T 1xgk_A            5 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTTSQ   84 (352)
T ss_dssp             CCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEECCCST
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHhhcCCcEEEECCccCCHHHHHHHHhcCCEEEEcCCCC
Confidence            467999987 9999999988888899999999887654  22322113322 235 556777777777899999877643


Q ss_pred             -CC----hHHHHhcccc-C--CeEEEEccC
Q 018382          256 -HP----LEPYLSLLKL-D--GKLILTGVI  277 (357)
Q Consensus       256 -~~----~~~~~~~l~~-~--G~~v~~g~~  277 (357)
                       ..    ...+++.++. +  +++|.++..
T Consensus        85 ~~~~~~~~~~l~~aa~~~g~v~~~V~~SS~  114 (352)
T 1xgk_A           85 AGDEIAIGKDLADAAKRAGTIQHYIYSSMP  114 (352)
T ss_dssp             TSCHHHHHHHHHHHHHHHSCCSEEEEEECC
T ss_pred             CcHHHHHHHHHHHHHHHcCCccEEEEeCCc
Confidence             11    1223333333 2  588877653

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=96.20  E-value=0.0095  Score=51.18  Aligned_cols=70  Identities=20%  Similarity=0.256  Sum_probs=51.1

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcE-EEcCCChhHHHHhh-------CCccEEEE
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQ-YLVSSDATRMQEAA-------DSLDYIID  250 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~-------~~~d~v~d  250 (357)
                      .++++||+|+ |++|.++++.+...|++|++++++++.     +..+... ..|..+.+.++++.       +++|++|+
T Consensus         6 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~-----~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~lv~   80 (250)
T 2fwm_X            6 SGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ-----EQYPFATEVMDVADAAQVAQVCQRLLAETERLDALVN   80 (250)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS-----SCCSSEEEECCTTCHHHHHHHHHHHHHHCSCCCEEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh-----hcCCceEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            4678999987 999999999999999999999987652     1144322 24666655444332       37999999


Q ss_pred             cCCC
Q 018382          251 TVPA  254 (357)
Q Consensus       251 ~~g~  254 (357)
                      ++|.
T Consensus        81 ~Ag~   84 (250)
T 2fwm_X           81 AAGI   84 (250)
T ss_dssp             CCCC
T ss_pred             CCCc
Confidence            9885

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=96.20  E-value=0.0032  Score=54.04  Aligned_cols=67  Identities=18%  Similarity=0.123  Sum_probs=45.8

Q ss_pred             CeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhh----CCccEEEEcCCCC
Q 018382          182 LRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAA----DSLDYIIDTVPAN  255 (357)
Q Consensus       182 ~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~----~~~d~v~d~~g~~  255 (357)
                      ++|||+|+ |.+|..+++.+...|++|++++++.++.+.       ....|..+.+.++++.    +++|++|+++|..
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------~~~~D~~~~~~~~~~~~~~~~~~d~vi~~Ag~~   73 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA-------DLSTPGGRETAVAAVLDRCGGVLDGLVCCAGVG   73 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC-------CTTSHHHHHHHHHHHHHHHTTCCSEEEECCCCC
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc-------cccCCcccHHHHHHHHHHcCCCccEEEECCCCC
Confidence            46899987 999999999888889999999987653210       1011222333333332    4899999998854

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=96.20  E-value=0.014  Score=51.37  Aligned_cols=87  Identities=20%  Similarity=0.154  Sum_probs=61.5

Q ss_pred             CeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCCChHHH
Q 018382          182 LRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPY  261 (357)
Q Consensus       182 ~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~  261 (357)
                      .+|.|+|+|.+|..+++.+...|.+|++.++++++.+.+.+ .|....   .+   ..+.....|+||.|+......+..
T Consensus         2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~-~g~~~~---~~---~~~~~~~aDvvi~~vp~~~~~~~v   74 (287)
T 3pef_A            2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAA-LGAERA---AT---PCEVVESCPVTFAMLADPAAAEEV   74 (287)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHH-TTCEEC---SS---HHHHHHHCSEEEECCSSHHHHHHH
T ss_pred             CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHH-CCCeec---CC---HHHHHhcCCEEEEEcCCHHHHHHH
Confidence            47899999999999999999999999999999998888877 565321   11   223334579999888854234433


Q ss_pred             H-------hccccCCeEEEEc
Q 018382          262 L-------SLLKLDGKLILTG  275 (357)
Q Consensus       262 ~-------~~l~~~G~~v~~g  275 (357)
                      +       ..++++..++..+
T Consensus        75 ~~~~~~l~~~l~~~~~vi~~s   95 (287)
T 3pef_A           75 CFGKHGVLEGIGEGRGYVDMS   95 (287)
T ss_dssp             HHSTTCHHHHCCTTCEEEECS
T ss_pred             HcCcchHhhcCCCCCEEEeCC
Confidence            3       4456666666553

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=96.18  E-value=0.017  Score=51.24  Aligned_cols=69  Identities=13%  Similarity=0.133  Sum_probs=51.5

Q ss_pred             CeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcE-EEcCCChhHHHHhhCCccEEEEcCCCC
Q 018382          182 LRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQ-YLVSSDATRMQEAADSLDYIIDTVPAN  255 (357)
Q Consensus       182 ~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~~~~d~v~d~~g~~  255 (357)
                      .+|||+|+ |.+|..+++.+...|.+|+++++++.+.. +.   +... ..|.. .+.+.++..++|+||.+++..
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~---~~~~~~~Dl~-~~~~~~~~~~~d~Vih~a~~~   73 (311)
T 3m2p_A            3 LKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-IN---DYEYRVSDYT-LEDLINQLNDVDAVVHLAATR   73 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC---------CCEEEECCCC-HHHHHHHTTTCSEEEECCCCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-CC---ceEEEEcccc-HHHHHHhhcCCCEEEEccccC
Confidence            57999987 99999999999999999999999854443 22   4332 24555 666777777999999998864

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=96.18  E-value=0.0096  Score=49.14  Aligned_cols=60  Identities=12%  Similarity=0.123  Sum_probs=45.4

Q ss_pred             eEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhh---CCccEEEEcCCC
Q 018382          183 RGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAA---DSLDYIIDTVPA  254 (357)
Q Consensus       183 ~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~---~~~d~v~d~~g~  254 (357)
                      ++||+|+ |.+|.++++.+. .|++|++++++.+           ....|..+++.++++.   +++|++|+++|.
T Consensus         5 ~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~-----------~~~~D~~~~~~~~~~~~~~~~~d~vi~~ag~   68 (202)
T 3d7l_A            5 KILLIGASGTLGSAVKERLE-KKAEVITAGRHSG-----------DVTVDITNIDSIKKMYEQVGKVDAIVSATGS   68 (202)
T ss_dssp             EEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS-----------SEECCTTCHHHHHHHHHHHCCEEEEEECCCC
T ss_pred             EEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc-----------ceeeecCCHHHHHHHHHHhCCCCEEEECCCC
Confidence            7999987 999999999888 8999999998753           2234566655544433   368999999874

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=96.18  E-value=0.022  Score=50.97  Aligned_cols=89  Identities=16%  Similarity=0.167  Sum_probs=63.8

Q ss_pred             CCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCCChHH
Q 018382          181 GLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEP  260 (357)
Q Consensus       181 ~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~  260 (357)
                      ..+|.|+|.|.+|..+++.+...|.+|++.++++++.+.+.+ .|....   .   ...+.....|+||.++......+.
T Consensus        31 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~-~g~~~~---~---~~~e~~~~aDvVi~~vp~~~~~~~  103 (320)
T 4dll_A           31 ARKITFLGTGSMGLPMARRLCEAGYALQVWNRTPARAASLAA-LGATIH---E---QARAAARDADIVVSMLENGAVVQD  103 (320)
T ss_dssp             CSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHT-TTCEEE---S---SHHHHHTTCSEEEECCSSHHHHHH
T ss_pred             CCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHH-CCCEee---C---CHHHHHhcCCEEEEECCCHHHHHH
Confidence            458999999999999999999999999999999998888777 565322   1   223445578999998886433443


Q ss_pred             HH------hccccCCeEEEEcc
Q 018382          261 YL------SLLKLDGKLILTGV  276 (357)
Q Consensus       261 ~~------~~l~~~G~~v~~g~  276 (357)
                      .+      ..++++..++..+.
T Consensus       104 v~~~~~~~~~l~~~~~vi~~st  125 (320)
T 4dll_A          104 VLFAQGVAAAMKPGSLFLDMAS  125 (320)
T ss_dssp             HHTTTCHHHHCCTTCEEEECSC
T ss_pred             HHcchhHHhhCCCCCEEEecCC
Confidence            33      34566666666543

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=96.17  E-value=0.003  Score=54.93  Aligned_cols=70  Identities=14%  Similarity=0.025  Sum_probs=53.9

Q ss_pred             CCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCc-EEEcCCChhHHHHhhCCccEEEEcCCC
Q 018382          181 GLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGAD-QYLVSSDATRMQEAADSLDYIIDTVPA  254 (357)
Q Consensus       181 ~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~~~~~~d~v~d~~g~  254 (357)
                      +++|||+|+ |.+|.++++.+...|.+|+++++++.+..   . .+.. ...|..+.+.+.++..++|+||+++|.
T Consensus         3 ~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~---~-~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~Ag~   74 (267)
T 3rft_A            3 MKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA---G-PNEECVQCDLADANAVNAMVAGCDGIVHLGGI   74 (267)
T ss_dssp             EEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC---C-TTEEEEECCTTCHHHHHHHHTTCSEEEECCSC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc---C-CCCEEEEcCCCCHHHHHHHHcCCCEEEECCCC
Confidence            467999987 99999999999888999999998865532   1 1222 234666777777777899999999875

>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}

Probab=96.17  E-value=0.022  Score=48.03  Aligned_cols=95  Identities=19%  Similarity=0.300  Sum_probs=63.3

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHc--CCeEEEEeCCcHHHHHHHHh---cCCc----EEEcCCChhHHHHh-hCCccEE
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAM--GHHVTVISSSDKKRVEAMEH---LGAD----QYLVSSDATRMQEA-ADSLDYI  248 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~--g~~V~~~~~~~~~~~~~~~~---~g~~----~vv~~~~~~~~~~~-~~~~d~v  248 (357)
                      +++.+||-+|+| .|..++.+++..  +.+|+.++.+++..+.+++.   .|..    .++..+..+.+... .+.||+|
T Consensus        55 ~~~~~vLdiG~G-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~~~~fD~V  133 (221)
T 3dr5_A           55 NGSTGAIAITPA-AGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLANDSYQLV  133 (221)
T ss_dssp             TTCCEEEEESTT-HHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSCTTCEEEE
T ss_pred             CCCCCEEEEcCC-chHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhcCCCcCeE
Confidence            455689988886 488888888876  57999999998877666553   3432    22222222333333 4579999


Q ss_pred             EEcCCCC---CChHHHHhccccCCeEEEE
Q 018382          249 IDTVPAN---HPLEPYLSLLKLDGKLILT  274 (357)
Q Consensus       249 ~d~~g~~---~~~~~~~~~l~~~G~~v~~  274 (357)
                      |-.....   ..++.+.+.|+|+|.++.-
T Consensus       134 ~~d~~~~~~~~~l~~~~~~LkpGG~lv~d  162 (221)
T 3dr5_A          134 FGQVSPMDLKALVDAAWPLLRRGGALVLA  162 (221)
T ss_dssp             EECCCTTTHHHHHHHHHHHEEEEEEEEET
T ss_pred             EEcCcHHHHHHHHHHHHHHcCCCcEEEEe
Confidence            8644432   1356788899999998864

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=96.16  E-value=0.033  Score=49.35  Aligned_cols=88  Identities=19%  Similarity=0.205  Sum_probs=62.8

Q ss_pred             CeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCCChHHH
Q 018382          182 LRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPY  261 (357)
Q Consensus       182 ~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~  261 (357)
                      .+|.|+|+|.+|..++..+...|.+|++.++++++.+.+.+ .|.......     ..+.....|+||.++......+..
T Consensus         8 ~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~-~g~~~~~~~-----~~e~~~~aDvvi~~vp~~~~~~~v   81 (303)
T 3g0o_A            8 FHVGIVGLGSMGMGAARSCLRAGLSTWGADLNPQACANLLA-EGACGAAAS-----AREFAGVVDALVILVVNAAQVRQV   81 (303)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-TTCSEEESS-----STTTTTTCSEEEECCSSHHHHHHH
T ss_pred             CeEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH-cCCccccCC-----HHHHHhcCCEEEEECCCHHHHHHH
Confidence            57999999999999999999899999999999999888887 676541211     112334689999888874334443


Q ss_pred             H-------hccccCCeEEEEc
Q 018382          262 L-------SLLKLDGKLILTG  275 (357)
Q Consensus       262 ~-------~~l~~~G~~v~~g  275 (357)
                      +       ..++++..++..+
T Consensus        82 ~~~~~~l~~~l~~g~ivv~~s  102 (303)
T 3g0o_A           82 LFGEDGVAHLMKPGSAVMVSS  102 (303)
T ss_dssp             HC--CCCGGGSCTTCEEEECS
T ss_pred             HhChhhHHhhCCCCCEEEecC
Confidence            3       3455666666554

>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}

Probab=96.13  E-value=0.078  Score=47.47  Aligned_cols=132  Identities=11%  Similarity=0.061  Sum_probs=79.4

Q ss_pred             eEEEEecChHHHHHHHHHHHc-CCeEEE-EeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhh-CCccEEEEcCCCCCChH
Q 018382          183 RGGILGLGGVGHMGVLIAKAM-GHHVTV-ISSSDKKRVEAMEHLGADQYLVSSDATRMQEAA-DSLDYIIDTVPANHPLE  259 (357)
Q Consensus       183 ~VlI~G~g~~G~~ai~la~~~-g~~V~~-~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~-~~~d~v~d~~g~~~~~~  259 (357)
                      +|.|+|+|.+|...+..++.. ++++++ .++++++.+.+.+.+|..    +.+.+.  -+. ..+|+|+.|+.......
T Consensus         5 ~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~----~~~~~~--~l~~~~~D~V~i~tp~~~h~~   78 (331)
T 4hkt_A            5 RFGLLGAGRIGKVHAKAVSGNADARLVAVADAFPAAAEAIAGAYGCE----VRTIDA--IEAAADIDAVVICTPTDTHAD   78 (331)
T ss_dssp             EEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCE----ECCHHH--HHHCTTCCEEEECSCGGGHHH
T ss_pred             EEEEECCCHHHHHHHHHHhhCCCcEEEEEECCCHHHHHHHHHHhCCC----cCCHHH--HhcCCCCCEEEEeCCchhHHH
Confidence            688999999999888877765 678774 556666767776668865    223221  122 37999999998875566


Q ss_pred             HHHhccccCCeEEEEccCCCCcccc---hHHH-hhccceEEEEeecC-HHHHHHHHHHHHhcCCCcc
Q 018382          260 PYLSLLKLDGKLILTGVINTPMQFL---TPMV-MLGRKAITGSFIGS-MKETKEMLEFCREKGVTSM  321 (357)
Q Consensus       260 ~~~~~l~~~G~~v~~g~~~~~~~~~---~~~~-~~~~~~i~g~~~~~-~~~~~~~~~~~~~~~l~~~  321 (357)
                      .+..+++.+ +-|.+.-+.....-.   +... -.++..+.-.+..+ ...++.+.+++.+|.+-.+
T Consensus        79 ~~~~al~~g-k~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i~~g~iG~i  144 (331)
T 4hkt_A           79 LIERFARAG-KAIFCEKPIDLDAERVRACLKVVSDTKAKLMVGFNRRFDPHFMAVRKAIDDGRIGEV  144 (331)
T ss_dssp             HHHHHHHTT-CEEEECSCSCSSHHHHHHHHHHHHHTTCCEEECCGGGGCHHHHHHHHHHHTTTTCSE
T ss_pred             HHHHHHHcC-CcEEEecCCCCCHHHHHHHHHHHHHcCCeEEEcccccCCHHHHHHHHHHHcCCCCce
Confidence            676777665 445554432211111   1111 22333333333222 2457778888888877654

>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1

Probab=96.12  E-value=0.019  Score=51.27  Aligned_cols=96  Identities=21%  Similarity=0.272  Sum_probs=65.6

Q ss_pred             CCCCCeEEEEecChHHHHHHHHHHHcC--CeEEEEeCCcHHHHHHHHhc---CCc--EEEcCCChhHHHHhhCCccEEEE
Q 018382          178 KQSGLRGGILGLGGVGHMGVLIAKAMG--HHVTVISSSDKKRVEAMEHL---GAD--QYLVSSDATRMQEAADSLDYIID  250 (357)
Q Consensus       178 ~~~~~~VlI~G~g~~G~~ai~la~~~g--~~V~~~~~~~~~~~~~~~~~---g~~--~vv~~~~~~~~~~~~~~~d~v~d  250 (357)
                      ++++++||-+|+|. |..++.+++..+  .+|++++.+++..+.+++.+   |..  .++..+-.+.. ...+.+|+|+.
T Consensus        73 ~~~~~~VLDiGcG~-G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~-~~~~~fD~Iv~  150 (317)
T 1dl5_A           73 LDKGMRVLEIGGGT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGV-PEFSPYDVIFV  150 (317)
T ss_dssp             CCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCC-GGGCCEEEEEE
T ss_pred             CCCcCEEEEecCCc-hHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhcc-ccCCCeEEEEE
Confidence            48999999999876 777888887653  46999999988877766532   432  22222111111 12357999998


Q ss_pred             cCCCCCChHHHHhccccCCeEEEEc
Q 018382          251 TVPANHPLEPYLSLLKLDGKLILTG  275 (357)
Q Consensus       251 ~~g~~~~~~~~~~~l~~~G~~v~~g  275 (357)
                      ...-......+.+.|+|+|+++..-
T Consensus       151 ~~~~~~~~~~~~~~LkpgG~lvi~~  175 (317)
T 1dl5_A          151 TVGVDEVPETWFTQLKEGGRVIVPI  175 (317)
T ss_dssp             CSBBSCCCHHHHHHEEEEEEEEEEB
T ss_pred             cCCHHHHHHHHHHhcCCCcEEEEEE
Confidence            7665545577889999999988753

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=96.11  E-value=0.038  Score=49.24  Aligned_cols=88  Identities=17%  Similarity=0.171  Sum_probs=64.4

Q ss_pred             CeEEEEecChHHHHHHHHHHHcCC--eEEEEeCCcHHHHHHHHhcCCc-EEEcCCChhHHHH-hhCCccEEEEcCCCCCC
Q 018382          182 LRGGILGLGGVGHMGVLIAKAMGH--HVTVISSSDKKRVEAMEHLGAD-QYLVSSDATRMQE-AADSLDYIIDTVPANHP  257 (357)
Q Consensus       182 ~~VlI~G~g~~G~~ai~la~~~g~--~V~~~~~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~-~~~~~d~v~d~~g~~~~  257 (357)
                      .+|.|+|.|.+|.++++.++..|.  +|++.++++++.+.+.+ .|.. .....     .++ .....|+||.|+... .
T Consensus        34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~-~G~~~~~~~~-----~~~~~~~~aDvVilavp~~-~  106 (314)
T 3ggo_A           34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVD-LGIIDEGTTS-----IAKVEDFSPDFVMLSSPVR-T  106 (314)
T ss_dssp             SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHH-TTSCSEEESC-----TTGGGGGCCSEEEECSCGG-G
T ss_pred             CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHH-CCCcchhcCC-----HHHHhhccCCEEEEeCCHH-H
Confidence            679999999999999999999998  99999999988888877 7852 32221     123 345789999998876 3


Q ss_pred             hH----HHHhccccCCeEEEEcc
Q 018382          258 LE----PYLSLLKLDGKLILTGV  276 (357)
Q Consensus       258 ~~----~~~~~l~~~G~~v~~g~  276 (357)
                      ..    .....++++..++.++.
T Consensus       107 ~~~vl~~l~~~l~~~~iv~d~~S  129 (314)
T 3ggo_A          107 FREIAKKLSYILSEDATVTDQGS  129 (314)
T ss_dssp             HHHHHHHHHHHSCTTCEEEECCS
T ss_pred             HHHHHHHHhhccCCCcEEEECCC
Confidence            33    33445666666666654

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=96.11  E-value=0.0065  Score=52.32  Aligned_cols=76  Identities=21%  Similarity=0.206  Sum_probs=49.4

Q ss_pred             CCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEe-CCcHHHHHHHH---hcCCc-E--EEcCCChhHHHHh-------hC
Q 018382          179 QSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVIS-SSDKKRVEAME---HLGAD-Q--YLVSSDATRMQEA-------AD  243 (357)
Q Consensus       179 ~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~-~~~~~~~~~~~---~~g~~-~--vv~~~~~~~~~~~-------~~  243 (357)
                      .++++|||+|+ |++|.++++.+...|++|++++ ++.++.....+   ..+.+ .  ..|..+.+.+++.       .+
T Consensus        11 ~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   90 (256)
T 3ezl_A           11 MSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAEVG   90 (256)
T ss_dssp             --CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHhcC
Confidence            46788999987 9999999999988999999887 44443322221   24432 2  2355554433332       23


Q ss_pred             CccEEEEcCCC
Q 018382          244 SLDYIIDTVPA  254 (357)
Q Consensus       244 ~~d~v~d~~g~  254 (357)
                      ++|++++++|.
T Consensus        91 ~id~lv~~Ag~  101 (256)
T 3ezl_A           91 EIDVLVNNAGI  101 (256)
T ss_dssp             CEEEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999885

>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}

Probab=96.10  E-value=0.016  Score=49.10  Aligned_cols=96  Identities=13%  Similarity=0.148  Sum_probs=65.4

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHc--CCeEEEEeCCcHHHHHHHHhc---CCc---EEEcCCChhHHHHhh-----CCc
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAM--GHHVTVISSSDKKRVEAMEHL---GAD---QYLVSSDATRMQEAA-----DSL  245 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~--g~~V~~~~~~~~~~~~~~~~~---g~~---~vv~~~~~~~~~~~~-----~~~  245 (357)
                      .++++||-+|+| .|..++.+++..  +.+|+.++.+++..+.+++.+   |..   .++..+..+.+..+.     +.|
T Consensus        71 ~~~~~vLdiG~G-~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~f  149 (232)
T 3cbg_A           71 TGAKQVLEIGVF-RGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEF  149 (232)
T ss_dssp             HTCCEEEEECCT-TSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCE
T ss_pred             cCCCEEEEecCC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCc
Confidence            567899999987 688888999876  469999999988777666533   431   223222233344442     579


Q ss_pred             cEEEEcCCCC---CChHHHHhccccCCeEEEEc
Q 018382          246 DYIIDTVPAN---HPLEPYLSLLKLDGKLILTG  275 (357)
Q Consensus       246 d~v~d~~g~~---~~~~~~~~~l~~~G~~v~~g  275 (357)
                      |+||-.....   ..++.+.+.|+++|.++.-.
T Consensus       150 D~V~~d~~~~~~~~~l~~~~~~LkpgG~lv~~~  182 (232)
T 3cbg_A          150 DLIFIDADKRNYPRYYEIGLNLLRRGGLMVIDN  182 (232)
T ss_dssp             EEEEECSCGGGHHHHHHHHHHTEEEEEEEEEEC
T ss_pred             CEEEECCCHHHHHHHHHHHHHHcCCCeEEEEeC
Confidence            9998443321   13677889999999988653

>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*

Probab=96.10  E-value=0.014  Score=51.04  Aligned_cols=94  Identities=16%  Similarity=0.172  Sum_probs=64.5

Q ss_pred             CCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc---CC---cEEEcCCChhHHHHhhCCccEEEEc
Q 018382          178 KQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL---GA---DQYLVSSDATRMQEAADSLDYIIDT  251 (357)
Q Consensus       178 ~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~---g~---~~vv~~~~~~~~~~~~~~~d~v~d~  251 (357)
                      +.++.+||-+|+|. |..+..+++..|.+|++++.+++..+.+++.+   |.   ..++. .+..   .+.+.+|+|+..
T Consensus        62 ~~~~~~vLDiGcG~-G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~-~d~~---~~~~~fD~v~~~  136 (287)
T 1kpg_A           62 LQPGMTLLDVGCGW-GATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLL-AGWE---QFDEPVDRIVSI  136 (287)
T ss_dssp             CCTTCEEEEETCTT-SHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEE-SCGG---GCCCCCSEEEEE
T ss_pred             CCCcCEEEEECCcc-cHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEE-CChh---hCCCCeeEEEEe
Confidence            47899999999865 77788888777999999999988877776643   21   12221 1211   223679999864


Q ss_pred             -----CCC---CCChHHHHhccccCCeEEEEcc
Q 018382          252 -----VPA---NHPLEPYLSLLKLDGKLILTGV  276 (357)
Q Consensus       252 -----~g~---~~~~~~~~~~l~~~G~~v~~g~  276 (357)
                           .+.   ...+..+.+.|+|+|+++....
T Consensus       137 ~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~  169 (287)
T 1kpg_A          137 GAFEHFGHERYDAFFSLAHRLLPADGVMLLHTI  169 (287)
T ss_dssp             SCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred             CchhhcChHHHHHHHHHHHHhcCCCCEEEEEEe
Confidence                 221   1245677889999999887543

>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}

Probab=96.08  E-value=0.014  Score=50.19  Aligned_cols=96  Identities=17%  Similarity=0.176  Sum_probs=64.8

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHc--CCeEEEEeCCcHHHHHHHHhc---CCc---EEEcCCChhHHHHhhC--CccEE
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAM--GHHVTVISSSDKKRVEAMEHL---GAD---QYLVSSDATRMQEAAD--SLDYI  248 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~--g~~V~~~~~~~~~~~~~~~~~---g~~---~vv~~~~~~~~~~~~~--~~d~v  248 (357)
                      .++.+||-+|+|. |..++.+++..  +.+|+.++.+++..+.+++.+   |..   .++..+..+.+.....  .||+|
T Consensus        62 ~~~~~VLdiG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V  140 (248)
T 3tfw_A           62 TQAKRILEIGTLG-GYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDLI  140 (248)
T ss_dssp             HTCSEEEEECCTT-SHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEE
T ss_pred             cCCCEEEEecCCc-hHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEE
Confidence            5788999999864 77788888876  469999999998777666533   432   2332222233444433  79999


Q ss_pred             EEcCCCC---CChHHHHhccccCCeEEEEc
Q 018382          249 IDTVPAN---HPLEPYLSLLKLDGKLILTG  275 (357)
Q Consensus       249 ~d~~g~~---~~~~~~~~~l~~~G~~v~~g  275 (357)
                      |-.....   ..++.+.+.|+|+|.++.-.
T Consensus       141 ~~d~~~~~~~~~l~~~~~~LkpGG~lv~~~  170 (248)
T 3tfw_A          141 FIDADKPNNPHYLRWALRYSRPGTLIIGDN  170 (248)
T ss_dssp             EECSCGGGHHHHHHHHHHTCCTTCEEEEEC
T ss_pred             EECCchHHHHHHHHHHHHhcCCCeEEEEeC
Confidence            8433322   24667789999999887653

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=96.08  E-value=0.015  Score=50.79  Aligned_cols=89  Identities=9%  Similarity=-0.012  Sum_probs=62.4

Q ss_pred             CeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEE-EcCCChhHHHHhhCCccEEEEcCCCCC----
Q 018382          182 LRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQY-LVSSDATRMQEAADSLDYIIDTVPANH----  256 (357)
Q Consensus       182 ~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~v-v~~~~~~~~~~~~~~~d~v~d~~g~~~----  256 (357)
                      .+|||+|+|.+|..+++.+...|.+|+++++++.+...+.. .+...+ .|..+.+     ..++|+||.+++...    
T Consensus         6 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~D~~d~~-----~~~~d~vi~~a~~~~~~~~   79 (286)
T 3ius_A            6 GTLLSFGHGYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA-SGAEPLLWPGEEPS-----LDGVTHLLISTAPDSGGDP   79 (286)
T ss_dssp             CEEEEETCCHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH-TTEEEEESSSSCCC-----CTTCCEEEECCCCBTTBCH
T ss_pred             CcEEEECCcHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh-CCCeEEEecccccc-----cCCCCEEEECCCccccccH
Confidence            57999999999999999998889999999999888776665 554433 2333322     468999999987642    


Q ss_pred             ChHHHHhcccc----CCeEEEEcc
Q 018382          257 PLEPYLSLLKL----DGKLILTGV  276 (357)
Q Consensus       257 ~~~~~~~~l~~----~G~~v~~g~  276 (357)
                      .....++.++.    -.+++.++.
T Consensus        80 ~~~~l~~a~~~~~~~~~~~v~~Ss  103 (286)
T 3ius_A           80 VLAALGDQIAARAAQFRWVGYLST  103 (286)
T ss_dssp             HHHHHHHHHHHTGGGCSEEEEEEE
T ss_pred             HHHHHHHHHHhhcCCceEEEEeec
Confidence            12334444433    257877653

>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*

Probab=96.06  E-value=0.013  Score=53.06  Aligned_cols=89  Identities=25%  Similarity=0.262  Sum_probs=64.0

Q ss_pred             CCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCC----
Q 018382          180 SGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPAN----  255 (357)
Q Consensus       180 ~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~----  255 (357)
                      .|.+|.|+|.|.+|..+++.++..|++|++.+++.++. ...+ +|+..+ .  +   ++++....|+|+.++...    
T Consensus       167 ~g~tvGIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~-~~~~-~g~~~~-~--~---l~ell~~aDvV~l~~P~t~~t~  238 (347)
T 1mx3_A          167 RGETLGIIGLGRVGQAVALRAKAFGFNVLFYDPYLSDG-VERA-LGLQRV-S--T---LQDLLFHSDCVTLHCGLNEHNH  238 (347)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTTCEEEEECTTSCTT-HHHH-HTCEEC-S--S---HHHHHHHCSEEEECCCCCTTCT
T ss_pred             CCCEEEEEeECHHHHHHHHHHHHCCCEEEEECCCcchh-hHhh-cCCeec-C--C---HHHHHhcCCEEEEcCCCCHHHH
Confidence            57899999999999999999999999999988765542 2333 676422 1  1   233444689999877543    


Q ss_pred             CCh-HHHHhccccCCeEEEEcc
Q 018382          256 HPL-EPYLSLLKLDGKLILTGV  276 (357)
Q Consensus       256 ~~~-~~~~~~l~~~G~~v~~g~  276 (357)
                      ..+ ...++.|+++..++.++-
T Consensus       239 ~li~~~~l~~mk~gailIN~ar  260 (347)
T 1mx3_A          239 HLINDFTVKQMRQGAFLVNTAR  260 (347)
T ss_dssp             TSBSHHHHTTSCTTEEEEECSC
T ss_pred             HHhHHHHHhcCCCCCEEEECCC
Confidence            123 456788999888887753

>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6

Probab=96.06  E-value=0.015  Score=51.42  Aligned_cols=86  Identities=22%  Similarity=0.247  Sum_probs=61.2

Q ss_pred             eEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCCChHHHH
Q 018382          183 RGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPYL  262 (357)
Q Consensus       183 ~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~  262 (357)
                      +|.|+|+|.+|...+..+...|.+|++.++++++.+.+.+ .|...   ..+.   .+.....|+||.++......+..+
T Consensus         7 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~-~g~~~---~~~~---~~~~~~~D~vi~~v~~~~~~~~~~   79 (299)
T 1vpd_A            7 KVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIA-AGAET---ASTA---KAIAEQCDVIITMLPNSPHVKEVA   79 (299)
T ss_dssp             EEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-TTCEE---CSSH---HHHHHHCSEEEECCSSHHHHHHHH
T ss_pred             eEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHH-CCCee---cCCH---HHHHhCCCEEEEECCCHHHHHHHH
Confidence            6899999999999999888889999999999888887777 56432   1221   222335899999998643344443


Q ss_pred             -------hccccCCeEEEEc
Q 018382          263 -------SLLKLDGKLILTG  275 (357)
Q Consensus       263 -------~~l~~~G~~v~~g  275 (357)
                             ..++++..++.++
T Consensus        80 ~~~~~l~~~l~~~~~vv~~s   99 (299)
T 1vpd_A           80 LGENGIIEGAKPGTVLIDMS   99 (299)
T ss_dssp             HSTTCHHHHCCTTCEEEECS
T ss_pred             hCcchHhhcCCCCCEEEECC
Confidence                   4566676666654

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=96.05  E-value=0.017  Score=50.05  Aligned_cols=75  Identities=17%  Similarity=0.140  Sum_probs=50.8

Q ss_pred             CCCeEEEEec---ChHHHHHHHHHHHcCCeEEEEeCCcHH-----HHHHHHhcCCcEE---EcCCChhHHHHh-------
Q 018382          180 SGLRGGILGL---GGVGHMGVLIAKAMGHHVTVISSSDKK-----RVEAMEHLGADQY---LVSSDATRMQEA-------  241 (357)
Q Consensus       180 ~~~~VlI~G~---g~~G~~ai~la~~~g~~V~~~~~~~~~-----~~~~~~~~g~~~v---v~~~~~~~~~~~-------  241 (357)
                      .++++||+|+   +++|.++++.+...|++|++++++..+     .+.+.+..+....   .|..+.+.++++       
T Consensus        19 ~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   98 (267)
T 3gdg_A           19 KGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVVAD   98 (267)
T ss_dssp             TTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHHHHH
Confidence            5788999975   499999999998899999999877533     2333333453322   355554433332       


Q ss_pred             hCCccEEEEcCCC
Q 018382          242 ADSLDYIIDTVPA  254 (357)
Q Consensus       242 ~~~~d~v~d~~g~  254 (357)
                      .+++|++|+++|.
T Consensus        99 ~g~id~li~nAg~  111 (267)
T 3gdg_A           99 FGQIDAFIANAGA  111 (267)
T ss_dssp             TSCCSEEEECCCC
T ss_pred             cCCCCEEEECCCc
Confidence            2379999999885

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=96.04  E-value=0.0047  Score=53.55  Aligned_cols=71  Identities=15%  Similarity=0.046  Sum_probs=50.5

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCc-EEEcCCChhHHHHhh-------CCccEEEE
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGAD-QYLVSSDATRMQEAA-------DSLDYIID  250 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~~~-------~~~d~v~d  250 (357)
                      .++++||+|+ |++|.++++.+...|++|++++++.++...    .... ...|..+++.++++.       +++|++++
T Consensus        27 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~----~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~  102 (260)
T 3un1_A           27 QQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSAD----PDIHTVAGDISKPETADRIVREGIERFGRIDSLVN  102 (260)
T ss_dssp             TCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCSS----TTEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc----CceEEEEccCCCHHHHHHHHHHHHHHCCCCCEEEE
Confidence            5688999987 999999999998899999999987654221    1111 123555655444332       37999999


Q ss_pred             cCCC
Q 018382          251 TVPA  254 (357)
Q Consensus       251 ~~g~  254 (357)
                      ++|.
T Consensus       103 nAg~  106 (260)
T 3un1_A          103 NAGV  106 (260)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            9875

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=96.03  E-value=0.014  Score=52.36  Aligned_cols=74  Identities=14%  Similarity=0.070  Sum_probs=50.8

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHH---HHHHHhcC-----CcE-EEcCCChhHHHHhhCCccEEE
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKR---VEAMEHLG-----ADQ-YLVSSDATRMQEAADSLDYII  249 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~---~~~~~~~g-----~~~-vv~~~~~~~~~~~~~~~d~v~  249 (357)
                      .+++|||+|+ |.+|..+++.+...|.+|++++++.+..   ..+.+ +.     ... ..|..+.+.+.++..++|+||
T Consensus         4 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vi   82 (337)
T 2c29_D            4 QSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLD-LPKAETHLTLWKADLADEGSFDEAIKGCTGVF   82 (337)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHHT-STTHHHHEEEEECCTTSTTTTHHHHTTCSEEE
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHHHh-cccCCCeEEEEEcCCCCHHHHHHHHcCCCEEE
Confidence            4678999986 9999999998888899999988876532   22211 22     111 225555555666667899999


Q ss_pred             EcCCC
Q 018382          250 DTVPA  254 (357)
Q Consensus       250 d~~g~  254 (357)
                      .+++.
T Consensus        83 h~A~~   87 (337)
T 2c29_D           83 HVATP   87 (337)
T ss_dssp             ECCCC
T ss_pred             Eeccc
Confidence            98764

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=96.02  E-value=0.0062  Score=52.52  Aligned_cols=74  Identities=12%  Similarity=0.054  Sum_probs=50.2

Q ss_pred             CeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHH--hcCCc-EEEcCCCh-hHHHHh---hCCccEEEEcCC
Q 018382          182 LRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAME--HLGAD-QYLVSSDA-TRMQEA---ADSLDYIIDTVP  253 (357)
Q Consensus       182 ~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~--~~g~~-~vv~~~~~-~~~~~~---~~~~d~v~d~~g  253 (357)
                      +++||+|+ |++|.++++.+...|++|+++++++++.+.+.+  ..|.+ ..+|..+- ..++++   .+++|++++++|
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lv~nAg   81 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSNDI   81 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEECCCCSHHHHHHHHHHHHSCCCEEEEECC
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCcEEEECHHHHHHHHHHHHHHhCCCCEEEECCC
Confidence            46889987 999999999999999999999988776554432  13432 22333332 223332   248999999987


Q ss_pred             CC
Q 018382          254 AN  255 (357)
Q Consensus       254 ~~  255 (357)
                      ..
T Consensus        82 ~~   83 (254)
T 1zmt_A           82 FA   83 (254)
T ss_dssp             CC
T ss_pred             cC
Confidence            53

>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A

Probab=96.02  E-value=0.019  Score=49.51  Aligned_cols=86  Identities=22%  Similarity=0.288  Sum_probs=63.1

Q ss_pred             CeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCCChHHH
Q 018382          182 LRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPY  261 (357)
Q Consensus       182 ~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~  261 (357)
                      -+|.|+|+|.+|...+..+...|.+|++.++++++.+.+.+.+|...   ..+.   .+.....|+||.++... .....
T Consensus         4 m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~g~~~---~~~~---~~~~~~~D~Vi~~v~~~-~~~~v   76 (259)
T 2ahr_A            4 MKIGIIGVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPY---AMSH---QDLIDQVDLVILGIKPQ-LFETV   76 (259)
T ss_dssp             CEEEEECCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCB---CSSH---HHHHHTCSEEEECSCGG-GHHHH
T ss_pred             cEEEEECCCHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHHcCCEe---eCCH---HHHHhcCCEEEEEeCcH-hHHHH
Confidence            36899999999999988888888899999999888887776567541   2221   22334799999999855 66667


Q ss_pred             HhccccCCeEEEE
Q 018382          262 LSLLKLDGKLILT  274 (357)
Q Consensus       262 ~~~l~~~G~~v~~  274 (357)
                      +..++++..++..
T Consensus        77 ~~~l~~~~~vv~~   89 (259)
T 2ahr_A           77 LKPLHFKQPIISM   89 (259)
T ss_dssp             HTTSCCCSCEEEC
T ss_pred             HHHhccCCEEEEe
Confidence            7777766555555

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=96.01  E-value=0.014  Score=50.54  Aligned_cols=76  Identities=12%  Similarity=0.101  Sum_probs=50.4

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEe-CCcHHHHHHHHh---cCCc-E--EEcCCChhHHHHhh-------CC
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVIS-SSDKKRVEAMEH---LGAD-Q--YLVSSDATRMQEAA-------DS  244 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~-~~~~~~~~~~~~---~g~~-~--vv~~~~~~~~~~~~-------~~  244 (357)
                      .++++||+|+ |++|.++++.+...|++|+++. ++.++.+...+.   .+.. .  ..|..+.+.++++.       ++
T Consensus        25 ~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~  104 (267)
T 4iiu_A           25 MSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQHGA  104 (267)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            4678999987 9999999999999999997755 554444433322   2322 2  23555554433322       37


Q ss_pred             ccEEEEcCCCC
Q 018382          245 LDYIIDTVPAN  255 (357)
Q Consensus       245 ~d~v~d~~g~~  255 (357)
                      +|++++++|..
T Consensus       105 id~li~nAg~~  115 (267)
T 4iiu_A          105 WYGVVSNAGIA  115 (267)
T ss_dssp             CSEEEECCCCC
T ss_pred             ccEEEECCCCC
Confidence            99999998753

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=96.00  E-value=0.0092  Score=54.67  Aligned_cols=74  Identities=12%  Similarity=0.074  Sum_probs=54.2

Q ss_pred             CCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcE-EEcCCChhHHHHhhCCccEEEEcCCCC
Q 018382          181 GLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQ-YLVSSDATRMQEAADSLDYIIDTVPAN  255 (357)
Q Consensus       181 ~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~~~~d~v~d~~g~~  255 (357)
                      ..+|||+|+ |.+|..+++.+...|.+|++++++..+...... .+... ..|..+.+.+.++..++|+||.+++..
T Consensus        29 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~v~~~~~Dl~d~~~~~~~~~~~d~Vih~A~~~  104 (379)
T 2c5a_A           29 NLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDM-FCDEFHLVDLRVMENCLKVTEGVDHVFNLAADM  104 (379)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGGG-TCSEEEECCTTSHHHHHHHHTTCSEEEECCCCC
T ss_pred             CCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhhcc-CCceEEECCCCCHHHHHHHhCCCCEEEECceec
Confidence            468999987 999999999888889999999987654321111 23322 246666666777777999999998853

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=95.98  E-value=0.011  Score=53.65  Aligned_cols=75  Identities=19%  Similarity=0.149  Sum_probs=53.0

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc----CCc-EEEcCCChhHHHHhhC--CccEEEEc
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL----GAD-QYLVSSDATRMQEAAD--SLDYIIDT  251 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~----g~~-~vv~~~~~~~~~~~~~--~~d~v~d~  251 (357)
                      .+.+|||+|+ |.+|..+++.+...|.+|++++++..+...+.+.+    +.. ...|..+.+.+.++..  ++|+||.+
T Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~   87 (357)
T 1rkx_A            8 QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFHM   87 (357)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHHHHhcCCCEEEEC
Confidence            3578999987 99999999999888999999998765433332212    222 2235556655555544  58999999


Q ss_pred             CCC
Q 018382          252 VPA  254 (357)
Q Consensus       252 ~g~  254 (357)
                      ++.
T Consensus        88 A~~   90 (357)
T 1rkx_A           88 AAQ   90 (357)
T ss_dssp             CSC
T ss_pred             CCC
Confidence            984

>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*

Probab=95.98  E-value=0.0042  Score=53.03  Aligned_cols=96  Identities=19%  Similarity=0.090  Sum_probs=62.9

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc---CCc-EEEcCCChhHHHHhh-CCccEE-EEcC
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL---GAD-QYLVSSDATRMQEAA-DSLDYI-IDTV  252 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~---g~~-~vv~~~~~~~~~~~~-~~~d~v-~d~~  252 (357)
                      .+|.+||-+|+| .|..+..+++..+.+|+++..+++-.+.+++..   +.. .++..+..+...... +.||.| +|+.
T Consensus        59 ~~G~rVLdiG~G-~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~FD~i~~D~~  137 (236)
T 3orh_A           59 SKGGRVLEVGFG-MAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTY  137 (236)
T ss_dssp             TTCEEEEEECCT-TSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCC
T ss_pred             cCCCeEEEECCC-ccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhhcccccccCCceEEEeee
Confidence            689999999986 377777888776779999999988877777632   222 222222122222222 368888 5654


Q ss_pred             CCC----------CChHHHHhccccCCeEEEEc
Q 018382          253 PAN----------HPLEPYLSLLKLDGKLILTG  275 (357)
Q Consensus       253 g~~----------~~~~~~~~~l~~~G~~v~~g  275 (357)
                      ...          ..++.+.+.|+|||+++...
T Consensus       138 ~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~  170 (236)
T 3orh_A          138 PLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN  170 (236)
T ss_dssp             CCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred             ecccchhhhcchhhhhhhhhheeCCCCEEEEEe
Confidence            332          12456788999999998653

>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*

Probab=95.98  E-value=0.012  Score=52.36  Aligned_cols=102  Identities=15%  Similarity=0.109  Sum_probs=66.7

Q ss_pred             hccCCCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCCc---EEEcCCChhHHHHhhCCcc
Q 018382          173 SHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGAD---QYLVSSDATRMQEAADSLD  246 (357)
Q Consensus       173 ~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~~---~vv~~~~~~~~~~~~~~~d  246 (357)
                      ..+..++++++||-+|+|. |..+..+++..+++|++++.+++..+.+++.   .|..   .++.. +...+....+.+|
T Consensus       110 ~~l~~~~~~~~vLDiGcG~-G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~-d~~~~~~~~~~fD  187 (312)
T 3vc1_A          110 DHLGQAGPDDTLVDAGCGR-GGSMVMAHRRFGSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVC-NMLDTPFDKGAVT  187 (312)
T ss_dssp             TTSCCCCTTCEEEEESCTT-SHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEEC-CTTSCCCCTTCEE
T ss_pred             HHhccCCCCCEEEEecCCC-CHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEEC-ChhcCCCCCCCEe
Confidence            3444358899999999864 7777788887789999999998877766553   3321   22221 1111111124799


Q ss_pred             EEEEcCC-----CCCChHHHHhccccCCeEEEEcc
Q 018382          247 YIIDTVP-----ANHPLEPYLSLLKLDGKLILTGV  276 (357)
Q Consensus       247 ~v~d~~g-----~~~~~~~~~~~l~~~G~~v~~g~  276 (357)
                      +|+..-.     -...+..+.+.|+|+|+++....
T Consensus       188 ~V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~~~~~  222 (312)
T 3vc1_A          188 ASWNNESTMYVDLHDLFSEHSRFLKVGGRYVTITG  222 (312)
T ss_dssp             EEEEESCGGGSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             EEEECCchhhCCHHHHHHHHHHHcCCCcEEEEEEc
Confidence            9986322     12256778889999999987754

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=95.97  E-value=0.024  Score=50.91  Aligned_cols=75  Identities=19%  Similarity=0.108  Sum_probs=51.7

Q ss_pred             CCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCc----------HHHHHHHHhcC--Cc-EEEcCCChhHHHHhhC--C
Q 018382          181 GLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSD----------KKRVEAMEHLG--AD-QYLVSSDATRMQEAAD--S  244 (357)
Q Consensus       181 ~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~----------~~~~~~~~~~g--~~-~vv~~~~~~~~~~~~~--~  244 (357)
                      +.+|||+|+ |.+|..+++.+...|.+|++++++.          +..+.+.+..+  .. ...|..+.+.+.++..  +
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   81 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYS   81 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhcC
Confidence            367999987 9999999998888899999998642          23333332123  22 2245566665655544  8


Q ss_pred             ccEEEEcCCCC
Q 018382          245 LDYIIDTVPAN  255 (357)
Q Consensus       245 ~d~v~d~~g~~  255 (357)
                      +|+||.+++..
T Consensus        82 ~d~vih~A~~~   92 (348)
T 1ek6_A           82 FMAVIHFAGLK   92 (348)
T ss_dssp             EEEEEECCSCC
T ss_pred             CCEEEECCCCc
Confidence            99999999864

>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6

Probab=95.96  E-value=0.026  Score=49.35  Aligned_cols=88  Identities=17%  Similarity=0.201  Sum_probs=62.1

Q ss_pred             CeEEEEecChHHHHHHHHHHHcCC--eEEEEeCCcHHHHHHHHhcCCc-EEEcCCChhHHHHhhC-CccEEEEcCCCCCC
Q 018382          182 LRGGILGLGGVGHMGVLIAKAMGH--HVTVISSSDKKRVEAMEHLGAD-QYLVSSDATRMQEAAD-SLDYIIDTVPANHP  257 (357)
Q Consensus       182 ~~VlI~G~g~~G~~ai~la~~~g~--~V~~~~~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~~~~-~~d~v~d~~g~~~~  257 (357)
                      .+|.|+|+|.+|.+.++.+...|.  +|++.++++++.+.+.+ +|.. ....  +   ..+... ..|+||.++... .
T Consensus         2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~-~g~~~~~~~--~---~~~~~~~~aDvVilavp~~-~   74 (281)
T 2g5c_A            2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVD-LGIIDEGTT--S---IAKVEDFSPDFVMLSSPVR-T   74 (281)
T ss_dssp             CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHH-TTSCSEEES--C---GGGGGGTCCSEEEECSCHH-H
T ss_pred             cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHH-CCCcccccC--C---HHHHhcCCCCEEEEcCCHH-H
Confidence            368899999999999999998887  89999999888877766 7853 2221  1   112345 789999998875 3


Q ss_pred             hH----HHHhccccCCeEEEEcc
Q 018382          258 LE----PYLSLLKLDGKLILTGV  276 (357)
Q Consensus       258 ~~----~~~~~l~~~G~~v~~g~  276 (357)
                      ..    .....++++..++.++.
T Consensus        75 ~~~v~~~l~~~l~~~~iv~~~~~   97 (281)
T 2g5c_A           75 FREIAKKLSYILSEDATVTDQGS   97 (281)
T ss_dssp             HHHHHHHHHHHSCTTCEEEECCS
T ss_pred             HHHHHHHHHhhCCCCcEEEECCC
Confidence            32    23345666666666544

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=95.95  E-value=0.041  Score=53.72  Aligned_cols=74  Identities=16%  Similarity=0.166  Sum_probs=48.7

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCC-cHHH-HHHHHhcCCcEEEcCCCh-h----HHHHh---hCCccEE
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSS-DKKR-VEAMEHLGADQYLVSSDA-T----RMQEA---ADSLDYI  248 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~-~~~~-~~~~~~~g~~~vv~~~~~-~----~~~~~---~~~~d~v  248 (357)
                      .++++||+|+ +++|.+.++.+...|++|++.++. .++. +.+.+ .|...+...-|- +    .++++   .+.+|++
T Consensus       321 ~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~~~i~~-~g~~~~~~~~Dv~~~~~~~~~~~~~~~G~iDiL  399 (604)
T 2et6_A          321 KDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIKA-AGGEAWPDQHDVAKDSEAIIKNVIDKYGTIDIL  399 (604)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHH-TTCEEEEECCCHHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCccHHHHHHHHHh-cCCeEEEEEcChHHHHHHHHHHHHHhcCCCCEE
Confidence            4678899987 999999999999999999998743 2332 33333 554433322232 1    22222   2479999


Q ss_pred             EEcCCC
Q 018382          249 IDTVPA  254 (357)
Q Consensus       249 ~d~~g~  254 (357)
                      ++++|-
T Consensus       400 VnNAGi  405 (604)
T 2et6_A          400 VNNAGI  405 (604)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999885

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=95.95  E-value=0.02  Score=50.94  Aligned_cols=88  Identities=22%  Similarity=0.169  Sum_probs=62.2

Q ss_pred             CCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCCChHH
Q 018382          181 GLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEP  260 (357)
Q Consensus       181 ~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~  260 (357)
                      -.+|.|+|+|.+|..+++.+...|.+|++.++++++.+.+.+ .|....   .+   ..+.....|+||.++......+.
T Consensus        21 m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~-~g~~~~---~~---~~~~~~~aDvvi~~vp~~~~~~~   93 (310)
T 3doj_A           21 MMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLSKCDELVE-HGASVC---ES---PAEVIKKCKYTIAMLSDPCAALS   93 (310)
T ss_dssp             SCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHH-TTCEEC---SS---HHHHHHHCSEEEECCSSHHHHHH
T ss_pred             CCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH-CCCeEc---CC---HHHHHHhCCEEEEEcCCHHHHHH
Confidence            357999999999999999999999999999999998888877 775321   11   12233457999988876433443


Q ss_pred             HH-------hccccCCeEEEEc
Q 018382          261 YL-------SLLKLDGKLILTG  275 (357)
Q Consensus       261 ~~-------~~l~~~G~~v~~g  275 (357)
                      .+       ..++++..++..+
T Consensus        94 v~~~~~~l~~~l~~g~~vv~~s  115 (310)
T 3doj_A           94 VVFDKGGVLEQICEGKGYIDMS  115 (310)
T ss_dssp             HHHSTTCGGGGCCTTCEEEECS
T ss_pred             HHhCchhhhhccCCCCEEEECC
Confidence            33       3455555666554

>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}

Probab=95.93  E-value=0.01  Score=52.29  Aligned_cols=84  Identities=21%  Similarity=0.291  Sum_probs=61.7

Q ss_pred             CCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCC---
Q 018382          180 SGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANH---  256 (357)
Q Consensus       180 ~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~---  256 (357)
                      .|++|.|+|.|.+|..+++.++..|.+|++.+++.++.+.      .. .  .   +.++++....|+|+.++....   
T Consensus       121 ~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~------~~-~--~---~~l~ell~~aDiV~l~~P~t~~t~  188 (290)
T 3gvx_A          121 YGKALGILGYGGIGRRVAHLAKAFGMRVIAYTRSSVDQNV------DV-I--S---ESPADLFRQSDFVLIAIPLTDKTR  188 (290)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSCCCTTC------SE-E--C---SSHHHHHHHCSEEEECCCCCTTTT
T ss_pred             ecchheeeccCchhHHHHHHHHhhCcEEEEEecccccccc------cc-c--c---CChHHHhhccCeEEEEeeccccch
Confidence            4789999999999999999999999999999987544221      11 1  1   123444557899998887421   


Q ss_pred             -Ch-HHHHhccccCCeEEEEc
Q 018382          257 -PL-EPYLSLLKLDGKLILTG  275 (357)
Q Consensus       257 -~~-~~~~~~l~~~G~~v~~g  275 (357)
                       .+ ...++.|+++..++.++
T Consensus       189 ~li~~~~l~~mk~gailIN~a  209 (290)
T 3gvx_A          189 GMVNSRLLANARKNLTIVNVA  209 (290)
T ss_dssp             TCBSHHHHTTCCTTCEEEECS
T ss_pred             hhhhHHHHhhhhcCceEEEee
Confidence             22 46778899999998875

>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36

Probab=95.92  E-value=0.02  Score=47.45  Aligned_cols=94  Identities=12%  Similarity=-0.006  Sum_probs=59.2

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCC-----------------cEEEcCCChhHHHHh
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGA-----------------DQYLVSSDATRMQEA  241 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~-----------------~~vv~~~~~~~~~~~  241 (357)
                      .++.+||.+|+|. |..+..+++. |.+|+.++.++...+.++++.+.                 -.++..+-.+.-..-
T Consensus        21 ~~~~~vLD~GCG~-G~~~~~la~~-g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~   98 (203)
T 1pjz_A           21 VPGARVLVPLCGK-SQDMSWLSGQ-GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARD   98 (203)
T ss_dssp             CTTCEEEETTTCC-SHHHHHHHHH-CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHH
T ss_pred             CCCCEEEEeCCCC-cHhHHHHHHC-CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCccc
Confidence            6788999998853 5666777776 89999999999988888775432                 111111111110111


Q ss_pred             hCCccEEEEcCCCC--------CChHHHHhccccCCeEEEE
Q 018382          242 ADSLDYIIDTVPAN--------HPLEPYLSLLKLDGKLILT  274 (357)
Q Consensus       242 ~~~~d~v~d~~g~~--------~~~~~~~~~l~~~G~~v~~  274 (357)
                      .+.||+|++...-.        ..+..+.+.|+|+|+++.+
T Consensus        99 ~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~  139 (203)
T 1pjz_A           99 IGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLI  139 (203)
T ss_dssp             HHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEE
T ss_pred             CCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEE
Confidence            14799999743211        1345678889999994443

>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*

Probab=95.90  E-value=0.018  Score=51.83  Aligned_cols=87  Identities=15%  Similarity=0.184  Sum_probs=63.5

Q ss_pred             CCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCC---
Q 018382          180 SGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANH---  256 (357)
Q Consensus       180 ~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~---  256 (357)
                      .|++|.|+|.|.+|..+++.++..|++|++.+++.++.  +.+ + +.. .  .+   ++++....|+|+.++....   
T Consensus       145 ~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~--~~~-~-~~~-~--~~---l~ell~~aDvV~l~~p~~~~t~  214 (333)
T 1j4a_A          145 RDQVVGVVGTGHIGQVFMQIMEGFGAKVITYDIFRNPE--LEK-K-GYY-V--DS---LDDLYKQADVISLHVPDVPANV  214 (333)
T ss_dssp             GGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHH--HHH-T-TCB-C--SC---HHHHHHHCSEEEECSCCCGGGT
T ss_pred             CCCEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcchh--HHh-h-Cee-c--CC---HHHHHhhCCEEEEcCCCcHHHH
Confidence            47899999999999999999999999999999887654  233 3 321 1  11   3344457899999887542   


Q ss_pred             -Ch-HHHHhccccCCeEEEEcc
Q 018382          257 -PL-EPYLSLLKLDGKLILTGV  276 (357)
Q Consensus       257 -~~-~~~~~~l~~~G~~v~~g~  276 (357)
                       .+ ...++.|++++.++.++-
T Consensus       215 ~li~~~~l~~mk~ga~lIn~ar  236 (333)
T 1j4a_A          215 HMINDESIAKMKQDVVIVNVSR  236 (333)
T ss_dssp             TCBSHHHHHHSCTTEEEEECSC
T ss_pred             HHHhHHHHhhCCCCcEEEECCC
Confidence             22 356788999998888753

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=95.88  E-value=0.012  Score=57.66  Aligned_cols=75  Identities=15%  Similarity=0.196  Sum_probs=47.6

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeC---------CcHHHHHHHH---hcCCcEEEcCCChhHHHHhh----
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISS---------SDKKRVEAME---HLGADQYLVSSDATRMQEAA----  242 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~---------~~~~~~~~~~---~~g~~~vv~~~~~~~~~~~~----  242 (357)
                      .|+++||+|+ +++|.+.++.+...|++|+++++         +.++.+.+.+   ..+...+.|..+.+.++++.    
T Consensus        18 ~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~D~~d~~~~~~~~~~~~   97 (613)
T 3oml_A           18 DGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAVADYNSVIDGAKVIETAI   97 (613)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCCEEECCCCGGGHHHHHC---
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeEEEEeCCHHHHHHHHHHHH
Confidence            5788999987 99999999999889999999876         3333332222   24555666776654444332    


Q ss_pred             ---CCccEEEEcCCC
Q 018382          243 ---DSLDYIIDTVPA  254 (357)
Q Consensus       243 ---~~~d~v~d~~g~  254 (357)
                         +.+|++++++|.
T Consensus        98 ~~~g~iDiLVnnAGi  112 (613)
T 3oml_A           98 KAFGRVDILVNNAGI  112 (613)
T ss_dssp             -------CEECCCCC
T ss_pred             HHCCCCcEEEECCCC
Confidence               269999999885

>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}

Probab=95.86  E-value=0.021  Score=51.60  Aligned_cols=87  Identities=18%  Similarity=0.227  Sum_probs=63.8

Q ss_pred             CCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCC----
Q 018382          180 SGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPAN----  255 (357)
Q Consensus       180 ~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~----  255 (357)
                      .|++|.|+|.|.+|..+++.++.+|.+|++.+++....+.  . .|...+      +.++++....|+|+-++...    
T Consensus       172 ~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~--~-~g~~~~------~~l~ell~~sDvV~l~~Plt~~T~  242 (345)
T 4g2n_A          172 TGRRLGIFGMGRIGRAIATRARGFGLAIHYHNRTRLSHAL--E-EGAIYH------DTLDSLLGASDIFLIAAPGRPELK  242 (345)
T ss_dssp             TTCEEEEESCSHHHHHHHHHHHTTTCEEEEECSSCCCHHH--H-TTCEEC------SSHHHHHHTCSEEEECSCCCGGGT
T ss_pred             CCCEEEEEEeChhHHHHHHHHHHCCCEEEEECCCCcchhh--h-cCCeEe------CCHHHHHhhCCEEEEecCCCHHHH
Confidence            4789999999999999999999999999999987543322  2 244321      12345556789999888742    


Q ss_pred             CCh-HHHHhccccCCeEEEEc
Q 018382          256 HPL-EPYLSLLKLDGKLILTG  275 (357)
Q Consensus       256 ~~~-~~~~~~l~~~G~~v~~g  275 (357)
                      ..+ ...++.|+++..++.++
T Consensus       243 ~li~~~~l~~mk~gailIN~a  263 (345)
T 4g2n_A          243 GFLDHDRIAKIPEGAVVINIS  263 (345)
T ss_dssp             TCBCHHHHHHSCTTEEEEECS
T ss_pred             HHhCHHHHhhCCCCcEEEECC
Confidence            123 46778899999988875

>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*

Probab=95.85  E-value=0.12  Score=46.60  Aligned_cols=133  Identities=16%  Similarity=0.115  Sum_probs=78.9

Q ss_pred             CeEEEEecChHHH-HHHHHHHHc-CCeEEEE-eCCcHHHHHHHHhcCCcEEEcCCChhHHHHhh--CCccEEEEcCCCCC
Q 018382          182 LRGGILGLGGVGH-MGVLIAKAM-GHHVTVI-SSSDKKRVEAMEHLGADQYLVSSDATRMQEAA--DSLDYIIDTVPANH  256 (357)
Q Consensus       182 ~~VlI~G~g~~G~-~ai~la~~~-g~~V~~~-~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~--~~~d~v~d~~g~~~  256 (357)
                      -+|.|+|+|.+|. ..+..++.. +++++++ ++++++.+.+.+++|...+   .+   .+++.  ..+|+|+.|+....
T Consensus        28 ~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~---~~---~~~ll~~~~~D~V~i~tp~~~  101 (350)
T 3rc1_A           28 IRVGVIGCADIAWRRALPALEAEPLTEVTAIASRRWDRAKRFTERFGGEPV---EG---YPALLERDDVDAVYVPLPAVL  101 (350)
T ss_dssp             EEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEESSHHHHHHHHHHHCSEEE---ES---HHHHHTCTTCSEEEECCCGGG
T ss_pred             eEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcCCHHHHHHHHHHcCCCCc---CC---HHHHhcCCCCCEEEECCCcHH
Confidence            4789999999998 566666655 6787754 5666777777666887543   12   22332  37999999998875


Q ss_pred             ChHHHHhccccCCeEEEEccCCCCcccc---hHH-HhhccceEEEEeecCH-HHHHHHHHHHHhcCCCcc
Q 018382          257 PLEPYLSLLKLDGKLILTGVINTPMQFL---TPM-VMLGRKAITGSFIGSM-KETKEMLEFCREKGVTSM  321 (357)
Q Consensus       257 ~~~~~~~~l~~~G~~v~~g~~~~~~~~~---~~~-~~~~~~~i~g~~~~~~-~~~~~~~~~~~~~~l~~~  321 (357)
                      ....+..+++.+ +-|++.-+.....-.   +.. .-.+++.+.-.+..+. ..++.+-+++.+|.|-.+
T Consensus       102 h~~~~~~al~aG-k~Vl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~~G~iG~i  170 (350)
T 3rc1_A          102 HAEWIDRALRAG-KHVLAEKPLTTDRPQAERLFAVARERGLLLMENFMFLHHPQHRQVADMLDEGVIGEI  170 (350)
T ss_dssp             HHHHHHHHHHTT-CEEEEESSSCSSHHHHHHHHHHHHHTTCCEEEECGGGGCTHHHHHHHHHHTTTTCSE
T ss_pred             HHHHHHHHHHCC-CcEEEeCCCCCCHHHHHHHHHHHHHhCCEEEEEecccCCHHHHHHHHHHhcCCCCCe
Confidence            566676777655 445564432211111   111 1223333333332222 456777778888777543

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=95.85  E-value=0.0057  Score=52.35  Aligned_cols=70  Identities=16%  Similarity=0.029  Sum_probs=46.6

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHH-cCCeEEEEeCCcH-HHHHHHHhcCCcEEEcCCChhHHHHhh-----CCccEEEEc
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKA-MGHHVTVISSSDK-KRVEAMEHLGADQYLVSSDATRMQEAA-----DSLDYIIDT  251 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~-~g~~V~~~~~~~~-~~~~~~~~~g~~~vv~~~~~~~~~~~~-----~~~d~v~d~  251 (357)
                      +++++||+|+ +++|.++++.+.. .|.+|++..++++ ..+.    . .....|..+.+.++++.     .++|+++++
T Consensus         3 ~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~~~~----~-~~~~~Dv~~~~~v~~~~~~~~~~~id~lv~n   77 (244)
T 4e4y_A            3 AMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSAEN----L-KFIKADLTKQQDITNVLDIIKNVSFDGIFLN   77 (244)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCCCTT----E-EEEECCTTCHHHHHHHHHHTTTCCEEEEEEC
T ss_pred             CCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEecccccccccc----c-eEEecCcCCHHHHHHHHHHHHhCCCCEEEEC
Confidence            4678999987 9999998877765 6889998887654 1110    1 11223555554444332     279999999


Q ss_pred             CCC
Q 018382          252 VPA  254 (357)
Q Consensus       252 ~g~  254 (357)
                      +|.
T Consensus        78 Ag~   80 (244)
T 4e4y_A           78 AGI   80 (244)
T ss_dssp             CCC
T ss_pred             Ccc
Confidence            986

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=95.83  E-value=0.027  Score=48.02  Aligned_cols=74  Identities=15%  Similarity=0.154  Sum_probs=46.7

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCC--ChhHHH---H-h--hCCccEEEE
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSS--DATRMQ---E-A--ADSLDYIID  250 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~--~~~~~~---~-~--~~~~d~v~d  250 (357)
                      .++++||+|+ |++|.++++.+.. |.+|+++.+++++.+.+.+ ......+..+  +....+   + +  .+++|++++
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~lv~   81 (245)
T 3e9n_A            4 KKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAE-IEGVEPIESDIVKEVLEEGGVDKLKNLDHVDTLVH   81 (245)
T ss_dssp             --CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHT-STTEEEEECCHHHHHHTSSSCGGGTTCSCCSEEEE
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHh-hcCCcceecccchHHHHHHHHHHHHhcCCCCEEEE
Confidence            4688999987 9999998887765 8999999999888776665 3322222211  111100   1 1  126999999


Q ss_pred             cCCCC
Q 018382          251 TVPAN  255 (357)
Q Consensus       251 ~~g~~  255 (357)
                      ++|..
T Consensus        82 ~Ag~~   86 (245)
T 3e9n_A           82 AAAVA   86 (245)
T ss_dssp             CC---
T ss_pred             CCCcC
Confidence            98863

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=95.82  E-value=0.0064  Score=54.63  Aligned_cols=76  Identities=16%  Similarity=0.112  Sum_probs=51.4

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc-CCc-EEEcCCChhHHHHhhCC--ccEEEEcCCC
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL-GAD-QYLVSSDATRMQEAADS--LDYIIDTVPA  254 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~-g~~-~vv~~~~~~~~~~~~~~--~d~v~d~~g~  254 (357)
                      .+.+|||+|+ |.+|..+++.+...|.+|++++++........+.+ +.. ...|..+.+.+.++..+  +|+||++++.
T Consensus        20 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~vih~A~~   99 (333)
T 2q1w_A           20 HMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDHPNLTFVEGSIADHALVNQLIGDLQPDAVVHTAAS   99 (333)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCCCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECCCC
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhhcCCceEEEEeCCCHHHHHHHHhccCCcEEEECcee
Confidence            4578999987 99999999988888999999998753221111111 221 12355666666655554  9999999886


Q ss_pred             C
Q 018382          255 N  255 (357)
Q Consensus       255 ~  255 (357)
                      .
T Consensus       100 ~  100 (333)
T 2q1w_A          100 Y  100 (333)
T ss_dssp             C
T ss_pred             c
Confidence            4

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=95.81  E-value=0.013  Score=56.27  Aligned_cols=72  Identities=19%  Similarity=0.285  Sum_probs=50.4

Q ss_pred             CCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHH-hhCCccEEEEcCCCC
Q 018382          180 SGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQE-AADSLDYIIDTVPAN  255 (357)
Q Consensus       180 ~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~-~~~~~d~v~d~~g~~  255 (357)
                      .+++++|+|+|++|.+++..+...|++|+++.++.++.+.+.+.++.. +++..+   +.. ....+|++++++|..
T Consensus       363 ~~k~vlV~GaGGig~aia~~L~~~G~~V~i~~R~~~~a~~la~~~~~~-~~~~~d---l~~~~~~~~DilVN~agvg  435 (523)
T 2o7s_A          363 ASKTVVVIGAGGAGKALAYGAKEKGAKVVIANRTYERALELAEAIGGK-ALSLTD---LDNYHPEDGMVLANTTSMG  435 (523)
T ss_dssp             ---CEEEECCSHHHHHHHHHHHHHCC-CEEEESSHHHHHHHHHHTTC--CEETTT---TTTC--CCSEEEEECSSTT
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCc-eeeHHH---hhhccccCceEEEECCCCC
Confidence            467899999999999999999999999999999988888777767642 222222   111 112589999999853

>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*

Probab=95.81  E-value=0.022  Score=49.89  Aligned_cols=93  Identities=12%  Similarity=0.128  Sum_probs=62.0

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhc----CC-----------cEEEcCCChhHHHHhh
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHL----GA-----------DQYLVSSDATRMQEAA  242 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~----g~-----------~~vv~~~~~~~~~~~~  242 (357)
                      .++++||++|+|. |..+..+++. +. +|++++.+++..+.+++.+    +.           -.++..+..+.+.. .
T Consensus        74 ~~~~~VLdiG~G~-G~~~~~l~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~-~  150 (281)
T 1mjf_A           74 PKPKRVLVIGGGD-GGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-N  150 (281)
T ss_dssp             SCCCEEEEEECTT-SHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-C
T ss_pred             CCCCeEEEEcCCc-CHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHHhcc-c
Confidence            4568999998753 5566677776 65 9999999988888887766    21           12332222233444 5


Q ss_pred             CCccEEEEcCCC----------CCChHHHHhccccCCeEEEE
Q 018382          243 DSLDYIIDTVPA----------NHPLEPYLSLLKLDGKLILT  274 (357)
Q Consensus       243 ~~~d~v~d~~g~----------~~~~~~~~~~l~~~G~~v~~  274 (357)
                      +.+|+|+-....          ...++.+.+.|+++|.++..
T Consensus       151 ~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~  192 (281)
T 1mjf_A          151 RGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQ  192 (281)
T ss_dssp             CCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEE
T ss_pred             CCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence            689999753331          11356788899999998875

>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}

Probab=95.80  E-value=0.077  Score=47.79  Aligned_cols=133  Identities=14%  Similarity=0.046  Sum_probs=79.9

Q ss_pred             CeEEEEecChHHHHHHHHHHHc-CCeEEE-EeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhC--CccEEEEcCCCCCC
Q 018382          182 LRGGILGLGGVGHMGVLIAKAM-GHHVTV-ISSSDKKRVEAMEHLGADQYLVSSDATRMQEAAD--SLDYIIDTVPANHP  257 (357)
Q Consensus       182 ~~VlI~G~g~~G~~ai~la~~~-g~~V~~-~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~--~~d~v~d~~g~~~~  257 (357)
                      -+|.|+|+|.+|...+..++.. ++++++ .++++++.+.+.+++|. .+++  +   .+++..  .+|+|+.|+.....
T Consensus         5 ~rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~-~~~~--~---~~~~l~~~~~D~V~i~tp~~~h   78 (344)
T 3euw_A            5 LRIALFGAGRIGHVHAANIAANPDLELVVIADPFIEGAQRLAEANGA-EAVA--S---PDEVFARDDIDGIVIGSPTSTH   78 (344)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHTTTC-EEES--S---HHHHTTCSCCCEEEECSCGGGH
T ss_pred             eEEEEECCcHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCC-ceeC--C---HHHHhcCCCCCEEEEeCCchhh
Confidence            3689999999999888877765 667774 55666676766666884 3332  2   233333  79999999988755


Q ss_pred             hHHHHhccccCCeEEEEccCCCCccc---chHHH-hhccceEEEEeecC-HHHHHHHHHHHHhcCCCcc
Q 018382          258 LEPYLSLLKLDGKLILTGVINTPMQF---LTPMV-MLGRKAITGSFIGS-MKETKEMLEFCREKGVTSM  321 (357)
Q Consensus       258 ~~~~~~~l~~~G~~v~~g~~~~~~~~---~~~~~-~~~~~~i~g~~~~~-~~~~~~~~~~~~~~~l~~~  321 (357)
                      ...+..+++.+-. |.+.-+.....-   .+... -.++..+.-.+..+ ...+..+-+++.+|.|-.+
T Consensus        79 ~~~~~~al~~gk~-v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i~~g~iG~i  146 (344)
T 3euw_A           79 VDLITRAVERGIP-ALCEKPIDLDIEMVRACKEKIGDGASKVMLGFNRRFDPSFAAINARVANQEIGNL  146 (344)
T ss_dssp             HHHHHHHHHTTCC-EEECSCSCSCHHHHHHHHHHHGGGGGGEEECCGGGGCHHHHHHHHHHHTTTTSSE
T ss_pred             HHHHHHHHHcCCc-EEEECCCCCCHHHHHHHHHHHHhcCCeEEecchhhcCHHHHHHHHHHhcCCCCce
Confidence            6667777766544 445433221111   11111 12233333333222 2567788888888887654

>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6

Probab=95.80  E-value=0.052  Score=47.28  Aligned_cols=85  Identities=19%  Similarity=0.155  Sum_probs=60.4

Q ss_pred             eEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCc-EEEcCCChhHHHHhhCCccEEEEcCCCCCChHHH
Q 018382          183 RGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGAD-QYLVSSDATRMQEAADSLDYIIDTVPANHPLEPY  261 (357)
Q Consensus       183 ~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~  261 (357)
                      +|.|+|+|.+|.+.+..+...|.+|++.++++++.+.+.+ .|.. .+..  +   ..+. ...|+||.++... .....
T Consensus         2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~-~g~~~~~~~--~---~~~~-~~~D~vi~av~~~-~~~~~   73 (279)
T 2f1k_A            2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVE-RQLVDEAGQ--D---LSLL-QTAKIIFLCTPIQ-LILPT   73 (279)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-TTSCSEEES--C---GGGG-TTCSEEEECSCHH-HHHHH
T ss_pred             EEEEEcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHh-CCCCccccC--C---HHHh-CCCCEEEEECCHH-HHHHH
Confidence            5889999999999999988889999999999888887766 7753 2221  1   1234 6799999998875 33333


Q ss_pred             H----hccccCCeEEEEc
Q 018382          262 L----SLLKLDGKLILTG  275 (357)
Q Consensus       262 ~----~~l~~~G~~v~~g  275 (357)
                      +    ..++++..++.++
T Consensus        74 ~~~l~~~~~~~~~vv~~~   91 (279)
T 2f1k_A           74 LEKLIPHLSPTAIVTDVA   91 (279)
T ss_dssp             HHHHGGGSCTTCEEEECC
T ss_pred             HHHHHhhCCCCCEEEECC
Confidence            3    3455566666553

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=95.79  E-value=0.0092  Score=50.68  Aligned_cols=68  Identities=18%  Similarity=0.150  Sum_probs=47.9

Q ss_pred             CCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhh------CCccEEEEcCC
Q 018382          181 GLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAA------DSLDYIIDTVP  253 (357)
Q Consensus       181 ~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~------~~~d~v~d~~g  253 (357)
                      ++++||+|+ |++|.++++.+...|++|++++++++ .+   + . .-...|..+.+.++++.      +++|++++++|
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~~---~-~-~~~~~D~~~~~~~~~~~~~~~~~~~~d~li~~ag   75 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-GE---D-L-IYVEGDVTREEDVRRAVARAQEEAPLFAVVSAAG   75 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-SS---S-S-EEEECCTTCHHHHHHHHHHHHHHSCEEEEEECCC
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-cc---c-e-EEEeCCCCCHHHHHHHHHHHHhhCCceEEEEccc
Confidence            578999987 99999999988888999999998754 11   1 1 11224555554444332      37999999987


Q ss_pred             C
Q 018382          254 A  254 (357)
Q Consensus       254 ~  254 (357)
                      .
T Consensus        76 ~   76 (242)
T 1uay_A           76 V   76 (242)
T ss_dssp             C
T ss_pred             c
Confidence            5

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=95.79  E-value=0.0042  Score=54.10  Aligned_cols=71  Identities=18%  Similarity=0.161  Sum_probs=49.3

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHh-------hCCccEEEEc
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEA-------ADSLDYIIDT  251 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~-------~~~~d~v~d~  251 (357)
                      .++++||+|+ |++|.++++.+...|++|++++++.++....     .....|..+.+.+.++       .+++|+++++
T Consensus        27 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~-----~~~~~Dv~~~~~~~~~~~~~~~~~g~iD~lvnn  101 (266)
T 3uxy_A           27 EGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAAD-----LHLPGDLREAAYADGLPGAVAAGLGRLDIVVNN  101 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSCCS-----EECCCCTTSHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHhh-----hccCcCCCCHHHHHHHHHHHHHhcCCCCEEEEC
Confidence            5788999987 9999999999988999999999876543211     0112344444333222       2479999999


Q ss_pred             CCCC
Q 018382          252 VPAN  255 (357)
Q Consensus       252 ~g~~  255 (357)
                      +|..
T Consensus       102 Ag~~  105 (266)
T 3uxy_A          102 AGVI  105 (266)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            8863

>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A

Probab=95.78  E-value=0.034  Score=46.77  Aligned_cols=96  Identities=15%  Similarity=0.156  Sum_probs=61.9

Q ss_pred             CCCCCeEEEEecChHHHHHHHHHHHcC--CeEEEEeCCcHHHHHHHHhcC---CcEEEcCC--ChhHHHHhhCCccEEEE
Q 018382          178 KQSGLRGGILGLGGVGHMGVLIAKAMG--HHVTVISSSDKKRVEAMEHLG---ADQYLVSS--DATRMQEAADSLDYIID  250 (357)
Q Consensus       178 ~~~~~~VlI~G~g~~G~~ai~la~~~g--~~V~~~~~~~~~~~~~~~~~g---~~~vv~~~--~~~~~~~~~~~~d~v~d  250 (357)
                      ++++++||-+|+|. |..+..+++..|  .+|++++.+++..+.+.+...   ...++..+  +........+.+|+|+-
T Consensus        71 ~~~~~~vLDlG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~~  149 (227)
T 1g8a_A           71 IKPGKSVLYLGIAS-GTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRALVPKVDVIFE  149 (227)
T ss_dssp             CCTTCEEEEETTTS-TTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCCEEEEEE
T ss_pred             CCCCCEEEEEeccC-CHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhccCCCEEEEccCCCcchhhcccCCceEEEE
Confidence            37899999999865 777788887764  599999999876555544332   11222221  11111122347999986


Q ss_pred             cCCCCC---C-hHHHHhccccCCeEEEE
Q 018382          251 TVPANH---P-LEPYLSLLKLDGKLILT  274 (357)
Q Consensus       251 ~~g~~~---~-~~~~~~~l~~~G~~v~~  274 (357)
                      ......   . +..+.+.|+|+|.++..
T Consensus       150 ~~~~~~~~~~~l~~~~~~LkpgG~l~~~  177 (227)
T 1g8a_A          150 DVAQPTQAKILIDNAEVYLKRGGYGMIA  177 (227)
T ss_dssp             CCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             CCCCHhHHHHHHHHHHHhcCCCCEEEEE
Confidence            554331   2 56688899999998876

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=95.78  E-value=0.018  Score=56.22  Aligned_cols=75  Identities=19%  Similarity=0.153  Sum_probs=50.4

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCc---------HHHHHHHH---hcCCcEEEcCCChh----HHHHh-
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSD---------KKRVEAME---HLGADQYLVSSDAT----RMQEA-  241 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~---------~~~~~~~~---~~g~~~vv~~~~~~----~~~~~-  241 (357)
                      .++++||+|+ +++|.+.++.+...|++|++.+++.         ++.+.+.+   ..|...+.|..+.+    .++++ 
T Consensus         7 ~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~~~d~~d~~~~~~~v~~~~   86 (604)
T 2et6_A            7 KDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVAVADYNNVLDGDKIVETAV   86 (604)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCEEEEECCCTTCHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCeEEEEcCCHHHHHHHHHHHH
Confidence            4678899987 8999999999999999999987643         33332222   24544555655532    23333 


Q ss_pred             --hCCccEEEEcCCC
Q 018382          242 --ADSLDYIIDTVPA  254 (357)
Q Consensus       242 --~~~~d~v~d~~g~  254 (357)
                        .+.+|++++++|-
T Consensus        87 ~~~G~iDiLVnNAGi  101 (604)
T 2et6_A           87 KNFGTVHVIINNAGI  101 (604)
T ss_dssp             HHHSCCCEEEECCCC
T ss_pred             HHcCCCCEEEECCCC
Confidence              2479999999985

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=95.77  E-value=0.026  Score=53.13  Aligned_cols=76  Identities=13%  Similarity=0.202  Sum_probs=51.8

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcH--HHHHHHHhcCCcE-EEcCCChhHHHHh-------hCC-ccE
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDK--KRVEAMEHLGADQ-YLVSSDATRMQEA-------ADS-LDY  247 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~--~~~~~~~~~g~~~-vv~~~~~~~~~~~-------~~~-~d~  247 (357)
                      +++++||+|+ |++|.++++.+...|++|+++.+++.  +.....+..+... ..|..+.+.++++       .++ +|+
T Consensus       212 ~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~l~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g~~id~  291 (454)
T 3u0b_A          212 DGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKVGGTALTLDVTADDAVDKITAHVTEHHGGKVDI  291 (454)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHTCEEEECCTTSTTHHHHHHHHHHHHSTTCCSE
T ss_pred             CCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHHcCCCceE
Confidence            5788999986 99999999888888999999887543  3333333355432 2455554433332       124 999


Q ss_pred             EEEcCCCC
Q 018382          248 IIDTVPAN  255 (357)
Q Consensus       248 v~d~~g~~  255 (357)
                      +|+++|..
T Consensus       292 lV~nAGv~  299 (454)
T 3u0b_A          292 LVNNAGIT  299 (454)
T ss_dssp             EEECCCCC
T ss_pred             EEECCccc
Confidence            99998863

>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*

Probab=95.77  E-value=0.021  Score=46.23  Aligned_cols=92  Identities=16%  Similarity=0.162  Sum_probs=61.9

Q ss_pred             CCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCC--c-EEEcCCChhHHHHhh--CCccEEE
Q 018382          178 KQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGA--D-QYLVSSDATRMQEAA--DSLDYII  249 (357)
Q Consensus       178 ~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~--~-~vv~~~~~~~~~~~~--~~~d~v~  249 (357)
                      ..++++||-+|+|. |..+..+++.. .+|++++.+++..+.+++.   .+.  . .++.. +  ....+.  ..+|+|+
T Consensus        31 ~~~~~~vldiG~G~-G~~~~~l~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~-d--~~~~~~~~~~~D~v~  105 (192)
T 1l3i_A           31 PGKNDVAVDVGCGT-GGVTLELAGRV-RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEG-D--APEALCKIPDIDIAV  105 (192)
T ss_dssp             CCTTCEEEEESCTT-SHHHHHHHTTS-SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEES-C--HHHHHTTSCCEEEEE
T ss_pred             CCCCCEEEEECCCC-CHHHHHHHHhc-CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEec-C--HHHhcccCCCCCEEE
Confidence            37889999999876 77777777765 8999999998877766653   332  1 22222 2  222222  4799998


Q ss_pred             EcCCCC---CChHHHHhccccCCeEEEE
Q 018382          250 DTVPAN---HPLEPYLSLLKLDGKLILT  274 (357)
Q Consensus       250 d~~g~~---~~~~~~~~~l~~~G~~v~~  274 (357)
                      ......   ..+..+.+.|+++|.++..
T Consensus       106 ~~~~~~~~~~~l~~~~~~l~~gG~l~~~  133 (192)
T 1l3i_A          106 VGGSGGELQEILRIIKDKLKPGGRIIVT  133 (192)
T ss_dssp             ESCCTTCHHHHHHHHHHTEEEEEEEEEE
T ss_pred             ECCchHHHHHHHHHHHHhcCCCcEEEEE
Confidence            654321   2456677889999998765

>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17

Probab=95.75  E-value=0.029  Score=50.02  Aligned_cols=95  Identities=21%  Similarity=0.156  Sum_probs=62.2

Q ss_pred             CCCeEEEEecChHHHHHHHHHHHcC-CeEEEEeCCcHHHHHHHHhcCC---------cEEEcCCChhHHHHhhCCccEEE
Q 018382          180 SGLRGGILGLGGVGHMGVLIAKAMG-HHVTVISSSDKKRVEAMEHLGA---------DQYLVSSDATRMQEAADSLDYII  249 (357)
Q Consensus       180 ~~~~VlI~G~g~~G~~ai~la~~~g-~~V~~~~~~~~~~~~~~~~~g~---------~~vv~~~~~~~~~~~~~~~d~v~  249 (357)
                      +.++||++|+|. |..+..+++..+ .+|+++..+++-.+.+++.+..         -.++..+..+.+....+.+|+|+
T Consensus       108 ~~~~VLdIG~G~-G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii  186 (314)
T 2b2c_A          108 DPKRVLIIGGGD-GGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVII  186 (314)
T ss_dssp             SCCEEEEESCTT-SHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEE
T ss_pred             CCCEEEEEcCCc-CHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEE
Confidence            457999998753 556667777654 5999999998888888876632         12222222233444345799998


Q ss_pred             EcCCC----------CCChHHHHhccccCCeEEEEc
Q 018382          250 DTVPA----------NHPLEPYLSLLKLDGKLILTG  275 (357)
Q Consensus       250 d~~g~----------~~~~~~~~~~l~~~G~~v~~g  275 (357)
                      -....          ...++.+.+.|+++|.++.-.
T Consensus       187 ~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~  222 (314)
T 2b2c_A          187 TDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQG  222 (314)
T ss_dssp             ECCC-------------HHHHHHHHEEEEEEEEEEC
T ss_pred             EcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence            53311          235677889999999998753

>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*

Probab=95.74  E-value=0.04  Score=49.11  Aligned_cols=95  Identities=13%  Similarity=0.098  Sum_probs=61.7

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcC-CeEEEEeCCcHHHHHHHHhcC----------CcEEEcCCChhHHHHhhCCccE
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMG-HHVTVISSSDKKRVEAMEHLG----------ADQYLVSSDATRMQEAADSLDY  247 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g-~~V~~~~~~~~~~~~~~~~~g----------~~~vv~~~~~~~~~~~~~~~d~  247 (357)
                      .+.++||++|+|. |..+..+++..+ .+|++++.+++-.+.+++.+.          .-.++..+..+.+....+.+|+
T Consensus        76 ~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~  154 (314)
T 1uir_A           76 PEPKRVLIVGGGE-GATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDV  154 (314)
T ss_dssp             SCCCEEEEEECTT-SHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEE
T ss_pred             CCCCeEEEEcCCc-CHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccE
Confidence            3558999998753 555667777654 599999999887777776442          1123322223334444457999


Q ss_pred             EEEcCCCC-------------CChHHHHhccccCCeEEEE
Q 018382          248 IIDTVPAN-------------HPLEPYLSLLKLDGKLILT  274 (357)
Q Consensus       248 v~d~~g~~-------------~~~~~~~~~l~~~G~~v~~  274 (357)
                      |+-.....             ..++.+.+.|+++|.++..
T Consensus       155 Ii~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~  194 (314)
T 1uir_A          155 VIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQ  194 (314)
T ss_dssp             EEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEE
T ss_pred             EEECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEE
Confidence            97543322             1366788899999998865

>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}

Probab=95.74  E-value=0.073  Score=46.55  Aligned_cols=77  Identities=19%  Similarity=0.101  Sum_probs=57.8

Q ss_pred             CeEEEEecChHHHHHHHHHHHcCC---eEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCCCh
Q 018382          182 LRGGILGLGGVGHMGVLIAKAMGH---HVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPL  258 (357)
Q Consensus       182 ~~VlI~G~g~~G~~ai~la~~~g~---~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~~  258 (357)
                      .+|.|+|+|.+|.+.++.+...|.   +|++.++++++.+.+.+.+|....   .+   ..+.....|+||-++... .+
T Consensus         4 ~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~---~~---~~~~~~~aDvVilav~p~-~~   76 (280)
T 3tri_A            4 SNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTT---QD---NRQGALNADVVVLAVKPH-QI   76 (280)
T ss_dssp             SCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEE---SC---HHHHHSSCSEEEECSCGG-GH
T ss_pred             CEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEe---CC---hHHHHhcCCeEEEEeCHH-HH
Confidence            568999999999999999888887   899999999999888886786432   11   123445789999999654 55


Q ss_pred             HHHHhcc
Q 018382          259 EPYLSLL  265 (357)
Q Consensus       259 ~~~~~~l  265 (357)
                      ...++.+
T Consensus        77 ~~vl~~l   83 (280)
T 3tri_A           77 KMVCEEL   83 (280)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            5544443

>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*

Probab=95.73  E-value=0.094  Score=44.86  Aligned_cols=95  Identities=14%  Similarity=0.164  Sum_probs=63.7

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHc--CCeEEEEeCCcHHHHHHHHh---cCCc---EEEcCCChhHHHHh------hCC
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAM--GHHVTVISSSDKKRVEAMEH---LGAD---QYLVSSDATRMQEA------ADS  244 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~--g~~V~~~~~~~~~~~~~~~~---~g~~---~vv~~~~~~~~~~~------~~~  244 (357)
                      .++++||-+|+| .|..++.+++..  +.+|+.++.+++..+.+++.   .|..   .++..+..+.+..+      .+.
T Consensus        78 ~~~~~VLeiG~G-~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~  156 (247)
T 1sui_A           78 INAKNTMEIGVY-TGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGS  156 (247)
T ss_dssp             TTCCEEEEECCG-GGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTC
T ss_pred             hCcCEEEEeCCC-cCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCC
Confidence            466789999875 377778888876  57999999999877766653   3431   23333323344444      357


Q ss_pred             ccEEEEcCCCC---CChHHHHhccccCCeEEEE
Q 018382          245 LDYIIDTVPAN---HPLEPYLSLLKLDGKLILT  274 (357)
Q Consensus       245 ~d~v~d~~g~~---~~~~~~~~~l~~~G~~v~~  274 (357)
                      ||+||-.....   ..++.+.+.|+++|.++.-
T Consensus       157 fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~d  189 (247)
T 1sui_A          157 YDFIFVDADKDNYLNYHKRLIDLVKVGGVIGYD  189 (247)
T ss_dssp             BSEEEECSCSTTHHHHHHHHHHHBCTTCCEEEE
T ss_pred             EEEEEEcCchHHHHHHHHHHHHhCCCCeEEEEe
Confidence            99998544332   2356788899999998754

>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*

Probab=95.73  E-value=0.13  Score=46.60  Aligned_cols=135  Identities=13%  Similarity=0.030  Sum_probs=80.7

Q ss_pred             CeEEEEecChHHHHHHHHHHHc--CCeEE-EEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhh-CCccEEEEcCCCCCC
Q 018382          182 LRGGILGLGGVGHMGVLIAKAM--GHHVT-VISSSDKKRVEAMEHLGADQYLVSSDATRMQEAA-DSLDYIIDTVPANHP  257 (357)
Q Consensus       182 ~~VlI~G~g~~G~~ai~la~~~--g~~V~-~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~-~~~d~v~d~~g~~~~  257 (357)
                      -+|.|+|+|.+|...+..++..  +++++ +.++++++.+.+.+++|. ..+  .+.+.  -+. ..+|+|+.|+.....
T Consensus        14 ~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~~~~~~~-~~~--~~~~~--ll~~~~~D~V~i~tp~~~h   88 (354)
T 3q2i_A           14 IRFALVGCGRIANNHFGALEKHADRAELIDVCDIDPAALKAAVERTGA-RGH--ASLTD--MLAQTDADIVILTTPSGLH   88 (354)
T ss_dssp             EEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHHCC-EEE--SCHHH--HHHHCCCSEEEECSCGGGH
T ss_pred             ceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcCCHHHHHHHHHHcCC-cee--CCHHH--HhcCCCCCEEEECCCcHHH
Confidence            4789999999998887777765  67776 445666777777666886 333  22211  122 479999999988745


Q ss_pred             hHHHHhccccCCeEEEEccCCCCcc---cchHHH-hhccceEE-EEeecCHHHHHHHHHHHHhcCCCccE
Q 018382          258 LEPYLSLLKLDGKLILTGVINTPMQ---FLTPMV-MLGRKAIT-GSFIGSMKETKEMLEFCREKGVTSMI  322 (357)
Q Consensus       258 ~~~~~~~l~~~G~~v~~g~~~~~~~---~~~~~~-~~~~~~i~-g~~~~~~~~~~~~~~~~~~~~l~~~i  322 (357)
                      ...+..+++.+ +-|.+.-+.....   ..+... -.++..+. +........++.+-+++++|.+-.+.
T Consensus        89 ~~~~~~al~~g-k~v~~EKP~a~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i~~g~iG~i~  157 (354)
T 3q2i_A           89 PTQSIECSEAG-FHVMTEKPMATRWEDGLEMVKAADKAKKHLFVVKQNRRNATLQLLKRAMQEKRFGRIY  157 (354)
T ss_dssp             HHHHHHHHHTT-CEEEECSSSCSSHHHHHHHHHHHHHHTCCEEECCGGGGSHHHHHHHHHHHTTTTCSEE
T ss_pred             HHHHHHHHHCC-CCEEEeCCCcCCHHHHHHHHHHHHHhCCeEEEEEcccCCHHHHHHHHHHhcCCCCceE
Confidence            56666777665 4455544322111   111111 12233332 33222224678888888888886643

>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}

Probab=95.72  E-value=0.022  Score=48.84  Aligned_cols=94  Identities=22%  Similarity=0.202  Sum_probs=63.8

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHc-CCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCC---
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAM-GHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPA---  254 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~-g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~---  254 (357)
                      .++.+||-+|+| .|..+..+++.. +.+|++++.++...+.+++......++..+-.+. . ..+.+|+|+....-   
T Consensus        32 ~~~~~vLdiG~G-~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~-~-~~~~fD~v~~~~~l~~~  108 (259)
T 2p35_A           32 ERVLNGYDLGCG-PGNSTELLTDRYGVNVITGIDSDDDMLEKAADRLPNTNFGKADLATW-K-PAQKADLLYANAVFQWV  108 (259)
T ss_dssp             SCCSSEEEETCT-TTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHSTTSEEEECCTTTC-C-CSSCEEEEEEESCGGGS
T ss_pred             CCCCEEEEecCc-CCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhCCCcEEEECChhhc-C-ccCCcCEEEEeCchhhC
Confidence            788899999886 466777777765 6799999999988888877533333332222111 1 23479999865421   


Q ss_pred             ---CCChHHHHhccccCCeEEEEc
Q 018382          255 ---NHPLEPYLSLLKLDGKLILTG  275 (357)
Q Consensus       255 ---~~~~~~~~~~l~~~G~~v~~g  275 (357)
                         ...+..+.+.|+|+|.++...
T Consensus       109 ~~~~~~l~~~~~~L~pgG~l~~~~  132 (259)
T 2p35_A          109 PDHLAVLSQLMDQLESGGVLAVQM  132 (259)
T ss_dssp             TTHHHHHHHHGGGEEEEEEEEEEE
T ss_pred             CCHHHHHHHHHHhcCCCeEEEEEe
Confidence               124566778999999988764

>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*

Probab=95.72  E-value=0.016  Score=51.49  Aligned_cols=96  Identities=20%  Similarity=0.153  Sum_probs=62.3

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcC-CeEEEEeCCcHHHHHHHHhcCC---------cEEEcCCChhHHHHhhCCccEE
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMG-HHVTVISSSDKKRVEAMEHLGA---------DQYLVSSDATRMQEAADSLDYI  248 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g-~~V~~~~~~~~~~~~~~~~~g~---------~~vv~~~~~~~~~~~~~~~d~v  248 (357)
                      ..+++||++|+|. |..+..+++..+ .+|++++.+++-.+.+++.+..         -.++..+..+.+....+.+|+|
T Consensus        94 ~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~I  172 (304)
T 2o07_A           94 PNPRKVLIIGGGD-GGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVI  172 (304)
T ss_dssp             SSCCEEEEEECTT-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEE
T ss_pred             CCCCEEEEECCCc-hHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEE
Confidence            4568999998753 566667777654 5999999998887777765421         1233222223344334579999


Q ss_pred             EEcCCC----------CCChHHHHhccccCCeEEEEc
Q 018382          249 IDTVPA----------NHPLEPYLSLLKLDGKLILTG  275 (357)
Q Consensus       249 ~d~~g~----------~~~~~~~~~~l~~~G~~v~~g  275 (357)
                      |--...          ...++.+.+.|+++|.++.-.
T Consensus       173 i~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~  209 (304)
T 2o07_A          173 ITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQG  209 (304)
T ss_dssp             EEECC-----------CHHHHHHHHHEEEEEEEEEEE
T ss_pred             EECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEec
Confidence            843222          124677889999999988653

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=95.72  E-value=0.0073  Score=51.56  Aligned_cols=70  Identities=17%  Similarity=0.173  Sum_probs=48.7

Q ss_pred             CCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEE--EcCCChhHHHHh-------h--CCcc
Q 018382          179 QSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQY--LVSSDATRMQEA-------A--DSLD  246 (357)
Q Consensus       179 ~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~v--v~~~~~~~~~~~-------~--~~~d  246 (357)
                      ..++++||+|+ |++|.++++.+...|++|+++++++++..      +....  .|..+.+.++++       .  +++|
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~------~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~iD   78 (241)
T 1dhr_A            5 GEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA------SASVIVKMTDSFTEQADQVTAEVGKLLGDQKVD   78 (241)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS------SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc------CCcEEEEcCCCCHHHHHHHHHHHHHHhCCCCCC
Confidence            45788999987 99999999999989999999998865432      11111  244444333222       1  4799


Q ss_pred             EEEEcCCC
Q 018382          247 YIIDTVPA  254 (357)
Q Consensus       247 ~v~d~~g~  254 (357)
                      ++++++|.
T Consensus        79 ~lv~~Ag~   86 (241)
T 1dhr_A           79 AILCVAGG   86 (241)
T ss_dssp             EEEECCCC
T ss_pred             EEEEcccc
Confidence            99999984

>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*

Probab=95.72  E-value=0.027  Score=48.28  Aligned_cols=102  Identities=15%  Similarity=0.114  Sum_probs=67.0

Q ss_pred             hhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCC---cEEEcCCChhHHHHhhCCc
Q 018382          172 LSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGA---DQYLVSSDATRMQEAADSL  245 (357)
Q Consensus       172 l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~---~~vv~~~~~~~~~~~~~~~  245 (357)
                      +..+..+.++.+||-+|+|. |..+..+++..+.+|++++.++...+.+++.   .|.   ..++..+- ..+....+.+
T Consensus        38 l~~l~~~~~~~~vLDiG~G~-G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~-~~~~~~~~~f  115 (257)
T 3f4k_A           38 VSFINELTDDAKIADIGCGT-GGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANCADRVKGITGSM-DNLPFQNEEL  115 (257)
T ss_dssp             HTTSCCCCTTCEEEEETCTT-SHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCT-TSCSSCTTCE
T ss_pred             HHHHhcCCCCCeEEEeCCCC-CHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECCh-hhCCCCCCCE
Confidence            44444557889999999874 7888889988777999999998877666553   332   12222111 1111112479


Q ss_pred             cEEEEcCCC-----CCChHHHHhccccCCeEEEEc
Q 018382          246 DYIIDTVPA-----NHPLEPYLSLLKLDGKLILTG  275 (357)
Q Consensus       246 d~v~d~~g~-----~~~~~~~~~~l~~~G~~v~~g  275 (357)
                      |+|+....-     ...+..+.+.|+|+|.++...
T Consensus       116 D~v~~~~~l~~~~~~~~l~~~~~~L~pgG~l~~~~  150 (257)
T 3f4k_A          116 DLIWSEGAIYNIGFERGMNEWSKYLKKGGFIAVSE  150 (257)
T ss_dssp             EEEEEESCSCCCCHHHHHHHHHTTEEEEEEEEEEE
T ss_pred             EEEEecChHhhcCHHHHHHHHHHHcCCCcEEEEEE
Confidence            999754222     124677888999999998765

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=95.71  E-value=0.033  Score=48.80  Aligned_cols=93  Identities=17%  Similarity=0.153  Sum_probs=60.0

Q ss_pred             CeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc------------CCcEE-Ec-----CCChhHHHHhhC
Q 018382          182 LRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL------------GADQY-LV-----SSDATRMQEAAD  243 (357)
Q Consensus       182 ~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~------------g~~~v-v~-----~~~~~~~~~~~~  243 (357)
                      ++|.|+|+|.+|..+++.+...|.+|++.++++++.+.+.+..            +.... .+     ....+...+...
T Consensus         5 ~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~~~~~   84 (283)
T 4e12_A            5 TNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYSDDLAQAVK   84 (283)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEESCHHHHTT
T ss_pred             CEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEeCCHHHHhc
Confidence            5799999999999999999999999999999988877665521            11000 00     000011223345


Q ss_pred             CccEEEEcCCCCC-----ChHHHHhccccCCeEEEE
Q 018382          244 SLDYIIDTVPANH-----PLEPYLSLLKLDGKLILT  274 (357)
Q Consensus       244 ~~d~v~d~~g~~~-----~~~~~~~~l~~~G~~v~~  274 (357)
                      +.|+||+++....     .+......++++..++..
T Consensus        85 ~aDlVi~av~~~~~~~~~v~~~l~~~~~~~~il~s~  120 (283)
T 4e12_A           85 DADLVIEAVPESLDLKRDIYTKLGELAPAKTIFATN  120 (283)
T ss_dssp             TCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEEC
T ss_pred             cCCEEEEeccCcHHHHHHHHHHHHhhCCCCcEEEEC
Confidence            7999999998741     223344456666655543

>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}

Probab=95.71  E-value=0.0033  Score=57.27  Aligned_cols=121  Identities=12%  Similarity=0.069  Sum_probs=74.4

Q ss_pred             ccccccchhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCc-------HHHHHHHHhcCCcE
Q 018382          157 QAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSD-------KKRVEAMEHLGADQ  228 (357)
Q Consensus       157 ~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~-------~~~~~~~~~~g~~~  228 (357)
                      +.-+.......-+.++...+.--+..+|+|+|+|..|..+++++...|+ +|++++++-       +++...++.|..+.
T Consensus       164 iqGTa~V~lAall~al~l~g~~l~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~Gli~~~R~~~L~~~k~~fa~~~  243 (398)
T 2a9f_A          164 QHGTAIVVLAAIFNSLKLLKKSLDEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFGIINEQEAAQLAPHHLDIAKVT  243 (398)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTCCTTSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTCCCSCCC---CHHHHH
T ss_pred             hhhHHHHHHHHHHHHHHHhCCCCCccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCCcccCCccccchHHHHHHhhcc
Confidence            3333333344445555555542356789999999999999999999999 999998762       11222222122110


Q ss_pred             EEcCCChhHHHHhhCCccEEEEcCCCCCChHHHHhccccCCeEEEEccCC
Q 018382          229 YLVSSDATRMQEAADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVIN  278 (357)
Q Consensus       229 vv~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~  278 (357)
                      - ..+....+++...+.|++|-+++..-..+..++.|+++-.++.+.++.
T Consensus       244 ~-~~~~~~~L~eav~~ADV~IG~Sapgl~T~EmVk~Ma~~pIIfalsNPt  292 (398)
T 2a9f_A          244 N-REFKSGTLEDALEGADIFIGVSAPGVLKAEWISKMAARPVIFAMANPI  292 (398)
T ss_dssp             S-CTTCCCSCSHHHHTTCSEEECCSTTCCCHHHHHTSCSSCEEEECCSSS
T ss_pred             C-cccchhhHHHHhccCCEEEecCCCCCCCHHHHHhhCCCCEEEECCCCC
Confidence            0 000111122333368999988775535678899999999998887765

>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}

Probab=95.70  E-value=0.099  Score=47.06  Aligned_cols=134  Identities=16%  Similarity=0.133  Sum_probs=79.4

Q ss_pred             eEEEEecChHHHHHHHHHHHc-CCeEEEE-eCCcHHHHHHHHhcCCcEEEcCCChhHHHHhh-CCccEEEEcCCCCCChH
Q 018382          183 RGGILGLGGVGHMGVLIAKAM-GHHVTVI-SSSDKKRVEAMEHLGADQYLVSSDATRMQEAA-DSLDYIIDTVPANHPLE  259 (357)
Q Consensus       183 ~VlI~G~g~~G~~ai~la~~~-g~~V~~~-~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~-~~~d~v~d~~g~~~~~~  259 (357)
                      +|.|+|+|.+|...+..++.. +++++.+ ++++++.+.+.+.+|...+++  +.+  +-+. ..+|+|+.|+.......
T Consensus         4 rvgiIG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~--~~~--~ll~~~~~D~V~i~tp~~~h~~   79 (344)
T 3ezy_A            4 RIGVIGLGRIGTIHAENLKMIDDAILYAISDVREDRLREMKEKLGVEKAYK--DPH--ELIEDPNVDAVLVCSSTNTHSE   79 (344)
T ss_dssp             EEEEECCSHHHHHHHHHGGGSTTEEEEEEECSCHHHHHHHHHHHTCSEEES--SHH--HHHHCTTCCEEEECSCGGGHHH
T ss_pred             EEEEEcCCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHhCCCceeC--CHH--HHhcCCCCCEEEEcCCCcchHH
Confidence            688999999999877766554 5677754 566677677666688655442  211  1122 37999999998874556


Q ss_pred             HHHhccccCCeEEEEccCCCCccc---chHHH-hhccceEEEEeecC-HHHHHHHHHHHHhcCCCcc
Q 018382          260 PYLSLLKLDGKLILTGVINTPMQF---LTPMV-MLGRKAITGSFIGS-MKETKEMLEFCREKGVTSM  321 (357)
Q Consensus       260 ~~~~~l~~~G~~v~~g~~~~~~~~---~~~~~-~~~~~~i~g~~~~~-~~~~~~~~~~~~~~~l~~~  321 (357)
                      .+..+++.+ +-|.+.-+.....-   .+... -.++..+.-.+..+ ...++.+-+++.+|.|-.+
T Consensus        80 ~~~~al~~g-k~v~~EKP~~~~~~e~~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~~G~iG~i  145 (344)
T 3ezy_A           80 LVIACAKAK-KHVFCEKPLSLNLADVDRMIEETKKADVILFTGFNRRFDRNFKKLKEAVENGTIGKP  145 (344)
T ss_dssp             HHHHHHHTT-CEEEEESCSCSCHHHHHHHHHHHHHHTCCEEEECGGGGCHHHHHHHHHHHTTTTSSE
T ss_pred             HHHHHHhcC-CeEEEECCCCCCHHHHHHHHHHHHHhCCcEEEeecccCCHHHHHHHHHHHcCCCCCe
Confidence            666666665 44445433221111   11111 12233333333322 2567788888888887654

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=95.67  E-value=0.034  Score=51.38  Aligned_cols=75  Identities=11%  Similarity=0.085  Sum_probs=50.5

Q ss_pred             CCCCeEEEEec-ChHHHHHHHHHHH-cCCeEEEEeCCcHHH----------------HHHHHhcCCcE---EEcCCChhH
Q 018382          179 QSGLRGGILGL-GGVGHMGVLIAKA-MGHHVTVISSSDKKR----------------VEAMEHLGADQ---YLVSSDATR  237 (357)
Q Consensus       179 ~~~~~VlI~G~-g~~G~~ai~la~~-~g~~V~~~~~~~~~~----------------~~~~~~~g~~~---vv~~~~~~~  237 (357)
                      +.++++||+|+ +++|++.+..+.. .|++|+++.++.+..                +.+.+ .|...   ..|..+++.
T Consensus        59 ~~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~-~G~~a~~i~~Dvtd~~~  137 (422)
T 3s8m_A           59 DGPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKA-AGLYSKSINGDAFSDAA  137 (422)
T ss_dssp             SSCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHH-TTCCEEEEESCTTSHHH
T ss_pred             cCCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHh-cCCcEEEEEecCCCHHH
Confidence            35788899987 8999998887777 899999988764321                23333 66432   235555443


Q ss_pred             HHH-------hh-CCccEEEEcCCC
Q 018382          238 MQE-------AA-DSLDYIIDTVPA  254 (357)
Q Consensus       238 ~~~-------~~-~~~d~v~d~~g~  254 (357)
                      +++       .. +++|++++++|.
T Consensus       138 v~~~v~~i~~~~~G~IDiLVNNAG~  162 (422)
T 3s8m_A          138 RAQVIELIKTEMGGQVDLVVYSLAS  162 (422)
T ss_dssp             HHHHHHHHHHHSCSCEEEEEECCCC
T ss_pred             HHHHHHHHHHHcCCCCCEEEEcCcc
Confidence            222       23 579999999875

>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*

Probab=95.64  E-value=0.017  Score=47.96  Aligned_cols=98  Identities=14%  Similarity=0.014  Sum_probs=65.1

Q ss_pred             cCCCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCC-c-EEEcCCChhHHHHhhCCccEEEEcC
Q 018382          175 FGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGA-D-QYLVSSDATRMQEAADSLDYIIDTV  252 (357)
Q Consensus       175 ~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~-~-~vv~~~~~~~~~~~~~~~d~v~d~~  252 (357)
                      ...+.++.+||-+|+|. |..+..+++. |.+|++++.++...+.+++ .+. . .++..+-.+.  ...+.+|+|+...
T Consensus        41 l~~~~~~~~vLdiG~G~-G~~~~~l~~~-~~~v~~~D~s~~~~~~a~~-~~~~~~~~~~~d~~~~--~~~~~~D~v~~~~  115 (218)
T 3ou2_A           41 LRAGNIRGDVLELASGT-GYWTRHLSGL-ADRVTALDGSAEMIAEAGR-HGLDNVEFRQQDLFDW--TPDRQWDAVFFAH  115 (218)
T ss_dssp             HTTTTSCSEEEEESCTT-SHHHHHHHHH-SSEEEEEESCHHHHHHHGG-GCCTTEEEEECCTTSC--CCSSCEEEEEEES
T ss_pred             HhcCCCCCeEEEECCCC-CHHHHHHHhc-CCeEEEEeCCHHHHHHHHh-cCCCCeEEEecccccC--CCCCceeEEEEec
Confidence            34347788999999864 6677777776 8899999999888887776 552 2 2222211111  1234799998643


Q ss_pred             CC--------CCChHHHHhccccCCeEEEEccC
Q 018382          253 PA--------NHPLEPYLSLLKLDGKLILTGVI  277 (357)
Q Consensus       253 g~--------~~~~~~~~~~l~~~G~~v~~g~~  277 (357)
                      .-        ...+..+.+.|+++|.++.....
T Consensus       116 ~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~  148 (218)
T 3ou2_A          116 WLAHVPDDRFEAFWESVRSAVAPGGVVEFVDVT  148 (218)
T ss_dssp             CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred             hhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence            21        12456677899999999877543

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=95.64  E-value=0.016  Score=52.02  Aligned_cols=74  Identities=16%  Similarity=0.136  Sum_probs=51.8

Q ss_pred             CCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHH--HHHHHhcC---CcEE--EcCCChhHHHHhhC--CccEEEE
Q 018382          181 GLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKR--VEAMEHLG---ADQY--LVSSDATRMQEAAD--SLDYIID  250 (357)
Q Consensus       181 ~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~--~~~~~~~g---~~~v--v~~~~~~~~~~~~~--~~d~v~d  250 (357)
                      +.+|||+|+ |.+|..+++.+...|.+|++++++.++.  ..+.+ ++   .-..  .|..+.+.+.++..  ++|+||+
T Consensus         3 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih   81 (345)
T 2z1m_A            3 GKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKE-LGIENDVKIIHMDLLEFSNIIRTIEKVQPDEVYN   81 (345)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHH-TTCTTTEEECCCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhh-ccccCceeEEECCCCCHHHHHHHHHhcCCCEEEE
Confidence            578999987 9999999998888899999999876542  23333 32   1122  24555555555444  5799999


Q ss_pred             cCCCC
Q 018382          251 TVPAN  255 (357)
Q Consensus       251 ~~g~~  255 (357)
                      +++..
T Consensus        82 ~A~~~   86 (345)
T 2z1m_A           82 LAAQS   86 (345)
T ss_dssp             CCCCC
T ss_pred             CCCCc
Confidence            99853

>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}

Probab=95.63  E-value=0.039  Score=49.72  Aligned_cols=92  Identities=22%  Similarity=0.157  Sum_probs=62.6

Q ss_pred             CCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCCChHH
Q 018382          181 GLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEP  260 (357)
Q Consensus       181 ~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~  260 (357)
                      -.+|.|+|.|.+|.+++..++..|.+|++.++++++.+.+.+ +|....  .+..+.+++.....|+||-++... .+..
T Consensus         8 ~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~~~~~~a~~-~G~~~~--~~~~e~~~~a~~~aDlVilavP~~-~~~~   83 (341)
T 3ktd_A            8 SRPVCILGLGLIGGSLLRDLHAANHSVFGYNRSRSGAKSAVD-EGFDVS--ADLEATLQRAAAEDALIVLAVPMT-AIDS   83 (341)
T ss_dssp             SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHH-TTCCEE--SCHHHHHHHHHHTTCEEEECSCHH-HHHH
T ss_pred             CCEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCCeee--CCHHHHHHhcccCCCEEEEeCCHH-HHHH
Confidence            357999999999999999999999999999999988888777 887432  111223333233678999888764 3333


Q ss_pred             HHhc---cccCCeEEEEcc
Q 018382          261 YLSL---LKLDGKLILTGV  276 (357)
Q Consensus       261 ~~~~---l~~~G~~v~~g~  276 (357)
                      .++.   ++++..+++++.
T Consensus        84 vl~~l~~~~~~~iv~Dv~S  102 (341)
T 3ktd_A           84 LLDAVHTHAPNNGFTDVVS  102 (341)
T ss_dssp             HHHHHHHHCTTCCEEECCS
T ss_pred             HHHHHHccCCCCEEEEcCC
Confidence            2222   345555555543

>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}

Probab=95.62  E-value=0.022  Score=50.06  Aligned_cols=86  Identities=23%  Similarity=0.155  Sum_probs=59.7

Q ss_pred             eEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCCChHHHH
Q 018382          183 RGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPYL  262 (357)
Q Consensus       183 ~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~  262 (357)
                      +|.|+|.|.+|..+++.+...|.+|++.++++++.+.+.+ .|....   .+   ..+.....|+||.++.....++..+
T Consensus         3 ~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~-~g~~~~---~~---~~~~~~~advvi~~v~~~~~~~~v~   75 (287)
T 3pdu_A            3 TYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPAKCAPLVA-LGARQA---SS---PAEVCAACDITIAMLADPAAAREVC   75 (287)
T ss_dssp             CEEEECCSTTHHHHHHHHHHHTCCEEEECSSGGGGHHHHH-HTCEEC---SC---HHHHHHHCSEEEECCSSHHHHHHHH
T ss_pred             eEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHH-CCCeec---CC---HHHHHHcCCEEEEEcCCHHHHHHHH
Confidence            6889999999999998888889999999999998888777 565321   11   2223345789998888752343333


Q ss_pred             -------hccccCCeEEEEc
Q 018382          263 -------SLLKLDGKLILTG  275 (357)
Q Consensus       263 -------~~l~~~G~~v~~g  275 (357)
                             ..++++..++..+
T Consensus        76 ~~~~~l~~~l~~g~~vv~~s   95 (287)
T 3pdu_A           76 FGANGVLEGIGGGRGYIDMS   95 (287)
T ss_dssp             HSTTCGGGTCCTTCEEEECS
T ss_pred             cCchhhhhcccCCCEEEECC
Confidence                   3455555565553

>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}

Probab=95.62  E-value=0.069  Score=47.50  Aligned_cols=93  Identities=22%  Similarity=0.108  Sum_probs=62.2

Q ss_pred             CeEEEEecChHHHHHHHHHHHc-CCeEEEEeCCcHHHHHHHHhcCCc-----EEEcCCChhHHHHh-hCCccEEEEcCCC
Q 018382          182 LRGGILGLGGVGHMGVLIAKAM-GHHVTVISSSDKKRVEAMEHLGAD-----QYLVSSDATRMQEA-ADSLDYIIDTVPA  254 (357)
Q Consensus       182 ~~VlI~G~g~~G~~ai~la~~~-g~~V~~~~~~~~~~~~~~~~~g~~-----~vv~~~~~~~~~~~-~~~~d~v~d~~g~  254 (357)
                      .+||++|+|. |..+..+++.. +.+|+++..+++-.+.+++.++..     .++..+..++++.. .+.||+||--...
T Consensus        91 ~rVLdIG~G~-G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~  169 (317)
T 3gjy_A           91 LRITHLGGGA-CTMARYFADVYPQSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIRDVFA  169 (317)
T ss_dssp             CEEEEESCGG-GHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEECCST
T ss_pred             CEEEEEECCc-CHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEECCCC
Confidence            3899998753 56677777754 679999999998888888877631     23322223344443 2479999753211


Q ss_pred             ----------CCChHHHHhccccCCeEEEEc
Q 018382          255 ----------NHPLEPYLSLLKLDGKLILTG  275 (357)
Q Consensus       255 ----------~~~~~~~~~~l~~~G~~v~~g  275 (357)
                                ...+..+.+.|+++|.++...
T Consensus       170 ~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~  200 (317)
T 3gjy_A          170 GAITPQNFTTVEFFEHCHRGLAPGGLYVANC  200 (317)
T ss_dssp             TSCCCGGGSBHHHHHHHHHHEEEEEEEEEEE
T ss_pred             ccccchhhhHHHHHHHHHHhcCCCcEEEEEe
Confidence                      113567888999999987653

>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*

Probab=95.62  E-value=0.04  Score=48.81  Aligned_cols=96  Identities=17%  Similarity=0.176  Sum_probs=61.9

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcC-CeEEEEeCCcHHHHHHHHhcC---------CcEEEcCCChhHHHH-hhCCccE
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMG-HHVTVISSSDKKRVEAMEHLG---------ADQYLVSSDATRMQE-AADSLDY  247 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g-~~V~~~~~~~~~~~~~~~~~g---------~~~vv~~~~~~~~~~-~~~~~d~  247 (357)
                      .++++||++|+|. |..+..+++..+ .+|++++.+++-.+.+++.+.         .-.++..+..+.... ..+.+|+
T Consensus        94 ~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDv  172 (304)
T 3bwc_A           94 PKPERVLIIGGGD-GGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDV  172 (304)
T ss_dssp             SSCCEEEEEECTT-SHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEE
T ss_pred             CCCCeEEEEcCCC-CHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeE
Confidence            4668999998753 556667777654 599999999888777776551         122332222223322 2457999


Q ss_pred             EEEcCCC----------CCChHHHHhccccCCeEEEEc
Q 018382          248 IIDTVPA----------NHPLEPYLSLLKLDGKLILTG  275 (357)
Q Consensus       248 v~d~~g~----------~~~~~~~~~~l~~~G~~v~~g  275 (357)
                      |+-....          ...++.+.+.|+++|.++...
T Consensus       173 Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~  210 (304)
T 3bwc_A          173 VIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQG  210 (304)
T ss_dssp             EEEECC---------CCHHHHHHHHHHEEEEEEEEEEE
T ss_pred             EEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEec
Confidence            9853321          124667888999999998763

>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*

Probab=95.62  E-value=0.021  Score=50.52  Aligned_cols=95  Identities=16%  Similarity=0.116  Sum_probs=59.8

Q ss_pred             CCCeEEEEecChHHHHHHHHHHHcC-CeEEEEeCCcHHHHHHHHhcC--------C-cEEEcCCChhHHHHhhCCccEEE
Q 018382          180 SGLRGGILGLGGVGHMGVLIAKAMG-HHVTVISSSDKKRVEAMEHLG--------A-DQYLVSSDATRMQEAADSLDYII  249 (357)
Q Consensus       180 ~~~~VlI~G~g~~G~~ai~la~~~g-~~V~~~~~~~~~~~~~~~~~g--------~-~~vv~~~~~~~~~~~~~~~d~v~  249 (357)
                      .+++||++|+|. |..+..+++..+ .+|++++.++...+.+++.+.        . -.++..+..+.+....+.+|+|+
T Consensus        90 ~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii  168 (296)
T 1inl_A           90 NPKKVLIIGGGD-GGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVII  168 (296)
T ss_dssp             SCCEEEEEECTT-CHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEE
T ss_pred             CCCEEEEEcCCc-CHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEE
Confidence            458999998753 555667777655 599999999888777776541        1 12222221222222235799997


Q ss_pred             EcCC-C----------CCChHHHHhccccCCeEEEEc
Q 018382          250 DTVP-A----------NHPLEPYLSLLKLDGKLILTG  275 (357)
Q Consensus       250 d~~g-~----------~~~~~~~~~~l~~~G~~v~~g  275 (357)
                      -... .          ...+..+.+.|+++|.++...
T Consensus       169 ~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~  205 (296)
T 1inl_A          169 IDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAET  205 (296)
T ss_dssp             EEC----------CCSHHHHHHHHHHEEEEEEEEEEC
T ss_pred             EcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence            4221 1          124567888999999998763

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=95.61  E-value=0.053  Score=51.77  Aligned_cols=78  Identities=14%  Similarity=0.061  Sum_probs=54.3

Q ss_pred             CCCCCeEEEEec-ChHHHHHHHHHHHcCC-eEEEEeCCcHH---HHHH---HHhcCCcE---EEcCCChhHHHHhh--CC
Q 018382          178 KQSGLRGGILGL-GGVGHMGVLIAKAMGH-HVTVISSSDKK---RVEA---MEHLGADQ---YLVSSDATRMQEAA--DS  244 (357)
Q Consensus       178 ~~~~~~VlI~G~-g~~G~~ai~la~~~g~-~V~~~~~~~~~---~~~~---~~~~g~~~---vv~~~~~~~~~~~~--~~  244 (357)
                      +++++++||+|+ |++|..+++.+...|+ +|+++.++...   .+.+   .+..|...   ..|..+.+.+.++.  ..
T Consensus       256 ~~~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~~~  335 (511)
T 2z5l_A          256 WQPSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTAYP  335 (511)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHHSC
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhcCC
Confidence            467899999987 9999999998888899 68888887531   2222   12245432   23666666555544  36


Q ss_pred             ccEEEEcCCCC
Q 018382          245 LDYIIDTVPAN  255 (357)
Q Consensus       245 ~d~v~d~~g~~  255 (357)
                      +|+||+++|..
T Consensus       336 ld~VVh~AGv~  346 (511)
T 2z5l_A          336 PNAVFHTAGIL  346 (511)
T ss_dssp             CSEEEECCCCC
T ss_pred             CcEEEECCccc
Confidence            99999999853

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=95.61  E-value=0.016  Score=51.54  Aligned_cols=73  Identities=15%  Similarity=0.034  Sum_probs=49.4

Q ss_pred             CCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeC-CcHH---HHHHHHhcCC----cEE--EcCCChhHHHHhhCCccEEE
Q 018382          181 GLRGGILGL-GGVGHMGVLIAKAMGHHVTVISS-SDKK---RVEAMEHLGA----DQY--LVSSDATRMQEAADSLDYII  249 (357)
Q Consensus       181 ~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~-~~~~---~~~~~~~~g~----~~v--v~~~~~~~~~~~~~~~d~v~  249 (357)
                      |++|||+|+ |.+|..+++.+...|.+|+++.+ +.+.   ...+.+ +..    -.+  .|..+.+.++++..++|+||
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi   79 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTN-LPGASEKLHFFNADLSNPDSFAAAIEGCVGIF   79 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHHHT-STTHHHHEEECCCCTTCGGGGHHHHTTCSEEE
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHHHh-hhccCCceEEEecCCCCHHHHHHHHcCCCEEE
Confidence            468999987 99999999988888999999887 5322   112211 210    112  25555666666667899999


Q ss_pred             EcCCC
Q 018382          250 DTVPA  254 (357)
Q Consensus       250 d~~g~  254 (357)
                      .+++.
T Consensus        80 h~A~~   84 (322)
T 2p4h_X           80 HTASP   84 (322)
T ss_dssp             ECCCC
T ss_pred             EcCCc
Confidence            98853

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=95.58  E-value=0.019  Score=51.29  Aligned_cols=76  Identities=14%  Similarity=0.049  Sum_probs=51.1

Q ss_pred             CCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHH--HHHHHhc----CCcE-EEcCCChhHHHHhhC--CccEE
Q 018382          179 QSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKR--VEAMEHL----GADQ-YLVSSDATRMQEAAD--SLDYI  248 (357)
Q Consensus       179 ~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~--~~~~~~~----g~~~-vv~~~~~~~~~~~~~--~~d~v  248 (357)
                      +++.+|||+|+ |.+|..+++.+...|.+|++++++..+.  ..+.. +    +... ..|..+.+.+.++..  .+|+|
T Consensus        12 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~V   90 (335)
T 1rpn_A           12 SMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRE-LGIEGDIQYEDGDMADACSVQRAVIKAQPQEV   90 (335)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHH-TTCGGGEEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred             ccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhh-ccccCceEEEECCCCCHHHHHHHHHHcCCCEE
Confidence            67899999987 9999999999888899999999876531  12222 2    1211 235556555555444  57999


Q ss_pred             EEcCCCC
Q 018382          249 IDTVPAN  255 (357)
Q Consensus       249 ~d~~g~~  255 (357)
                      |.+++..
T Consensus        91 ih~A~~~   97 (335)
T 1rpn_A           91 YNLAAQS   97 (335)
T ss_dssp             EECCSCC
T ss_pred             EECcccc
Confidence            9998853

>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}

Probab=95.57  E-value=0.017  Score=48.75  Aligned_cols=96  Identities=19%  Similarity=0.185  Sum_probs=62.1

Q ss_pred             CCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCC-cEEEcCCChhHHHHh-hCCccEEEEcC
Q 018382          178 KQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGA-DQYLVSSDATRMQEA-ADSLDYIIDTV  252 (357)
Q Consensus       178 ~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~-~~vv~~~~~~~~~~~-~~~~d~v~d~~  252 (357)
                      ++++++||=+|+|..|..++.+++..+.+|++++.+++..+.+++.   .|. ..++..+. ...... .+.+|+|+-..
T Consensus        53 ~~~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~-~~~~~~~~~~fD~I~~np  131 (230)
T 3evz_A           53 LRGGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNG-GIIKGVVEGTFDVIFSAP  131 (230)
T ss_dssp             CCSSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSS-CSSTTTCCSCEEEEEECC
T ss_pred             cCCCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCc-hhhhhcccCceeEEEECC
Confidence            3789999999888667778888877688999999998877666543   332 22332221 111112 25799998431


Q ss_pred             CC-------------------------CCChHHHHhccccCCeEEEE
Q 018382          253 PA-------------------------NHPLEPYLSLLKLDGKLILT  274 (357)
Q Consensus       253 g~-------------------------~~~~~~~~~~l~~~G~~v~~  274 (357)
                      .-                         ...+..+.+.|+++|+++.+
T Consensus       132 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~  178 (230)
T 3evz_A          132 PYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALY  178 (230)
T ss_dssp             CCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred             CCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEE
Confidence            10                         11356677788888888765

>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*

Probab=95.56  E-value=0.032  Score=48.92  Aligned_cols=96  Identities=11%  Similarity=0.106  Sum_probs=62.6

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcC-CeEEEEeCCcHHHHHHHHhcCC---------cEEEcCCChhHHHHhhCCccEE
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMG-HHVTVISSSDKKRVEAMEHLGA---------DQYLVSSDATRMQEAADSLDYI  248 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g-~~V~~~~~~~~~~~~~~~~~g~---------~~vv~~~~~~~~~~~~~~~d~v  248 (357)
                      .++++||++|+|. |..+..+++..+ .+|++++.+++-.+.+++.+..         -.++..+..+.+....+.+|+|
T Consensus        77 ~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I  155 (283)
T 2i7c_A           77 KEPKNVLVVGGGD-GGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVI  155 (283)
T ss_dssp             SSCCEEEEEECTT-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEE
T ss_pred             CCCCeEEEEeCCc-CHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEE
Confidence            4568999998753 555666666654 5999999998888888876642         1233222223344445689999


Q ss_pred             EEcCCC----------CCChHHHHhccccCCeEEEEc
Q 018382          249 IDTVPA----------NHPLEPYLSLLKLDGKLILTG  275 (357)
Q Consensus       249 ~d~~g~----------~~~~~~~~~~l~~~G~~v~~g  275 (357)
                      +--...          ...++.+.+.|+++|.++...
T Consensus       156 i~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~  192 (283)
T 2i7c_A          156 IVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQC  192 (283)
T ss_dssp             EEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEEC
T ss_pred             EEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEC
Confidence            752211          124567788999999998763

>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0

Probab=95.55  E-value=0.032  Score=46.78  Aligned_cols=96  Identities=17%  Similarity=0.108  Sum_probs=64.6

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHc--CCeEEEEeCCcHHHHHHHHhc---CCc---EEEcCCChhHHHHhh-----CCc
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAM--GHHVTVISSSDKKRVEAMEHL---GAD---QYLVSSDATRMQEAA-----DSL  245 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~--g~~V~~~~~~~~~~~~~~~~~---g~~---~vv~~~~~~~~~~~~-----~~~  245 (357)
                      .++.+||-+|+|. |..++.+++..  +.+|+.++.+++..+.+++.+   |..   .++..+..+.+....     +.+
T Consensus        63 ~~~~~vLdiG~G~-G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~f  141 (225)
T 3tr6_A           63 MQAKKVIDIGTFT-GYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQY  141 (225)
T ss_dssp             HTCSEEEEECCTT-SHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCE
T ss_pred             hCCCEEEEeCCcc-hHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCc
Confidence            5778999998864 77788888876  469999999988776665533   432   233322234444444     679


Q ss_pred             cEEEEcCCCC---CChHHHHhccccCCeEEEEc
Q 018382          246 DYIIDTVPAN---HPLEPYLSLLKLDGKLILTG  275 (357)
Q Consensus       246 d~v~d~~g~~---~~~~~~~~~l~~~G~~v~~g  275 (357)
                      |+||-.....   ..+..+.+.|+++|.++.-.
T Consensus       142 D~v~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~  174 (225)
T 3tr6_A          142 DLIYIDADKANTDLYYEESLKLLREGGLIAVDN  174 (225)
T ss_dssp             EEEEECSCGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred             cEEEECCCHHHHHHHHHHHHHhcCCCcEEEEeC
Confidence            9998433322   13567888999999998643

>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13

Probab=95.54  E-value=0.027  Score=49.06  Aligned_cols=96  Identities=20%  Similarity=0.217  Sum_probs=66.0

Q ss_pred             CCCCCCeEEEEecChHHHHHHHHHHHc--CCeEEEEeCCcHHHHHHHHhc----CCc--EEEcCCChhHHHHhh-CCccE
Q 018382          177 LKQSGLRGGILGLGGVGHMGVLIAKAM--GHHVTVISSSDKKRVEAMEHL----GAD--QYLVSSDATRMQEAA-DSLDY  247 (357)
Q Consensus       177 ~~~~~~~VlI~G~g~~G~~ai~la~~~--g~~V~~~~~~~~~~~~~~~~~----g~~--~vv~~~~~~~~~~~~-~~~d~  247 (357)
                      .++++++||-+|+| .|..++.+++..  +.+|++++.+++..+.+++.+    |.+  .++..+-.+   ... +.+|+
T Consensus       107 ~~~~~~~VLD~G~G-~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~---~~~~~~fD~  182 (275)
T 1yb2_A          107 GLRPGMDILEVGVG-SGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIAD---FISDQMYDA  182 (275)
T ss_dssp             CCCTTCEEEEECCT-TSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTT---CCCSCCEEE
T ss_pred             CCCCcCEEEEecCC-CCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhc---cCcCCCccE
Confidence            34889999999986 467777888764  569999999998877776643    422  222221111   112 36999


Q ss_pred             EEEcCCCC-CChHHHHhccccCCeEEEEcc
Q 018382          248 IIDTVPAN-HPLEPYLSLLKLDGKLILTGV  276 (357)
Q Consensus       248 v~d~~g~~-~~~~~~~~~l~~~G~~v~~g~  276 (357)
                      |+-..... ..+..+.+.|+++|+++....
T Consensus       183 Vi~~~~~~~~~l~~~~~~LkpgG~l~i~~~  212 (275)
T 1yb2_A          183 VIADIPDPWNHVQKIASMMKPGSVATFYLP  212 (275)
T ss_dssp             EEECCSCGGGSHHHHHHTEEEEEEEEEEES
T ss_pred             EEEcCcCHHHHHHHHHHHcCCCCEEEEEeC
Confidence            98755443 367889999999999987643

>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}

Probab=95.52  E-value=0.0099  Score=53.22  Aligned_cols=87  Identities=22%  Similarity=0.306  Sum_probs=61.8

Q ss_pred             CCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCC----
Q 018382          180 SGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPAN----  255 (357)
Q Consensus       180 ~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~----  255 (357)
                      .|++|.|+|.|.+|..+++.++.+|.+|++..++.+..+      .....+..   ..++++....|+|+.++...    
T Consensus       136 ~gktvGIiGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~------~~~~~~~~---~~l~ell~~aDvV~l~lPlt~~t~  206 (324)
T 3evt_A          136 TGQQLLIYGTGQIGQSLAAKASALGMHVIGVNTTGHPAD------HFHETVAF---TATADALATANFIVNALPLTPTTH  206 (324)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCCCCT------TCSEEEEG---GGCHHHHHHCSEEEECCCCCGGGT
T ss_pred             cCCeEEEECcCHHHHHHHHHHHhCCCEEEEECCCcchhH------hHhhcccc---CCHHHHHhhCCEEEEcCCCchHHH
Confidence            578999999999999999999999999999998754421      12222211   12334445689999887642    


Q ss_pred             CCh-HHHHhccccCCeEEEEc
Q 018382          256 HPL-EPYLSLLKLDGKLILTG  275 (357)
Q Consensus       256 ~~~-~~~~~~l~~~G~~v~~g  275 (357)
                      ..+ ...++.|+++..++.++
T Consensus       207 ~li~~~~l~~mk~gailIN~a  227 (324)
T 3evt_A          207 HLFSTELFQQTKQQPMLINIG  227 (324)
T ss_dssp             TCBSHHHHHTCCSCCEEEECS
T ss_pred             HhcCHHHHhcCCCCCEEEEcC
Confidence            122 45778899999888875

>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}

Probab=95.52  E-value=0.033  Score=49.56  Aligned_cols=88  Identities=22%  Similarity=0.184  Sum_probs=61.6

Q ss_pred             CeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCCChHHH
Q 018382          182 LRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPY  261 (357)
Q Consensus       182 ~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~  261 (357)
                      .+|.|+|+|.+|...+..+...|.+|++.++++++.+.+.+ .|...   ..+   ..+.....|+||.++.........
T Consensus        31 ~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~-~g~~~---~~~---~~~~~~~~DvVi~av~~~~~~~~v  103 (316)
T 2uyy_A           31 KKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQ-EGARL---GRT---PAEVVSTCDITFACVSDPKAAKDL  103 (316)
T ss_dssp             SCEEEECCSHHHHHHHHHHHHTTCCEEEECSSGGGGHHHHH-TTCEE---CSC---HHHHHHHCSEEEECCSSHHHHHHH
T ss_pred             CeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHH-cCCEE---cCC---HHHHHhcCCEEEEeCCCHHHHHHH
Confidence            56999999999999998888889999999999888877776 67531   112   122234689999999854344444


Q ss_pred             H-------hccccCCeEEEEcc
Q 018382          262 L-------SLLKLDGKLILTGV  276 (357)
Q Consensus       262 ~-------~~l~~~G~~v~~g~  276 (357)
                      +       ..++++..++.++.
T Consensus       104 ~~~~~~~~~~l~~~~~vv~~s~  125 (316)
T 2uyy_A          104 VLGPSGVLQGIRPGKCYVDMST  125 (316)
T ss_dssp             HHSTTCGGGGCCTTCEEEECSC
T ss_pred             HcCchhHhhcCCCCCEEEECCC
Confidence            3       33556666666643

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=95.52  E-value=0.014  Score=52.37  Aligned_cols=73  Identities=15%  Similarity=-0.004  Sum_probs=50.6

Q ss_pred             eEEEEec-ChHHHHHHHHHHHc-CCeEEEEeCCcHHHHHHHHhcCCcE-EEcCCC-hhHHHHhhCCccEEEEcCCCC
Q 018382          183 RGGILGL-GGVGHMGVLIAKAM-GHHVTVISSSDKKRVEAMEHLGADQ-YLVSSD-ATRMQEAADSLDYIIDTVPAN  255 (357)
Q Consensus       183 ~VlI~G~-g~~G~~ai~la~~~-g~~V~~~~~~~~~~~~~~~~~g~~~-vv~~~~-~~~~~~~~~~~d~v~d~~g~~  255 (357)
                      +|||+|+ |.+|..+++.+... |.+|++++++..+...+.+..+... ..|..+ .+.++++..++|+||.+++..
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~d~vih~A~~~   78 (345)
T 2bll_A            2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIA   78 (345)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHHHCSEEEECBCCC
T ss_pred             eEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhhcCCCeEEEeccccCcHHHHHhhccCCCEEEEccccc
Confidence            6899987 99999999988887 8999999998766443322112222 124444 344555556899999998754

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=95.51  E-value=0.042  Score=50.40  Aligned_cols=76  Identities=13%  Similarity=0.023  Sum_probs=49.6

Q ss_pred             CCCCeEEEEec-ChHHHHHHHHHHH-cCCeEEEEeCCcHH---------------HHHHHHhcCCcE---EEcCCChhHH
Q 018382          179 QSGLRGGILGL-GGVGHMGVLIAKA-MGHHVTVISSSDKK---------------RVEAMEHLGADQ---YLVSSDATRM  238 (357)
Q Consensus       179 ~~~~~VlI~G~-g~~G~~ai~la~~-~g~~V~~~~~~~~~---------------~~~~~~~~g~~~---vv~~~~~~~~  238 (357)
                      ..++++||+|+ +++|++.++.+.. .|++|+++.++.+.               .....+..|...   ..|..+++.+
T Consensus        45 ~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~~v  124 (405)
T 3zu3_A           45 NGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEIK  124 (405)
T ss_dssp             TCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHH
T ss_pred             CCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHHHH
Confidence            45678899987 8999998887777 89999988765432               121222356432   2355554433


Q ss_pred             HHh-------hCCccEEEEcCCC
Q 018382          239 QEA-------ADSLDYIIDTVPA  254 (357)
Q Consensus       239 ~~~-------~~~~d~v~d~~g~  254 (357)
                      +++       .+++|++++++|.
T Consensus       125 ~~~v~~i~~~~G~IDiLVNNAG~  147 (405)
T 3zu3_A          125 QLTIDAIKQDLGQVDQVIYSLAS  147 (405)
T ss_dssp             HHHHHHHHHHTSCEEEEEECCCC
T ss_pred             HHHHHHHHHHcCCCCEEEEcCcc
Confidence            322       2479999999875

>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}

Probab=95.50  E-value=0.029  Score=45.79  Aligned_cols=95  Identities=17%  Similarity=0.149  Sum_probs=60.3

Q ss_pred             cCCCCCCCeEEEEecChHHHHHHHHHHHcC----------CeEEEEeCCcHHHHHHHHhcCCcEEE-cCC--ChhHHH--
Q 018382          175 FGLKQSGLRGGILGLGGVGHMGVLIAKAMG----------HHVTVISSSDKKRVEAMEHLGADQYL-VSS--DATRMQ--  239 (357)
Q Consensus       175 ~~~~~~~~~VlI~G~g~~G~~ai~la~~~g----------~~V~~~~~~~~~~~~~~~~~g~~~vv-~~~--~~~~~~--  239 (357)
                      ...++++++||.+|+|. |..++.+++..+          .+|++++.++...      ......+ ..+  +.....  
T Consensus        17 ~~~~~~~~~vLDlGcG~-G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~~------~~~~~~~~~~d~~~~~~~~~~   89 (196)
T 2nyu_A           17 HQILRPGLRVLDCGAAP-GAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFP------LEGATFLCPADVTDPRTSQRI   89 (196)
T ss_dssp             HCCCCTTCEEEEETCCS-CHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCCC------CTTCEEECSCCTTSHHHHHHH
T ss_pred             cCCCCCCCEEEEeCCCC-CHHHHHHHHHhccccccccCCCceEEEEechhccc------CCCCeEEEeccCCCHHHHHHH
Confidence            34457899999999987 888899999876          6899999886421      1112223 211  211111  


Q ss_pred             -H-hh-CCccEEEEc-----CCCC------------CChHHHHhccccCCeEEEEcc
Q 018382          240 -E-AA-DSLDYIIDT-----VPAN------------HPLEPYLSLLKLDGKLILTGV  276 (357)
Q Consensus       240 -~-~~-~~~d~v~d~-----~g~~------------~~~~~~~~~l~~~G~~v~~g~  276 (357)
                       . .. +.+|+|+..     .+..            ..+..+.+.|+|+|+++....
T Consensus        90 ~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~  146 (196)
T 2nyu_A           90 LEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTW  146 (196)
T ss_dssp             HHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred             HHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEec
Confidence             1 12 379999942     2221            245667889999999987633

>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}

Probab=95.49  E-value=0.07  Score=47.82  Aligned_cols=135  Identities=12%  Similarity=-0.015  Sum_probs=79.6

Q ss_pred             CeEEEEecChHHHHHHHHHHHc-CCeEEEE-eCCcHHHHHHHHhcCCcEEEcCCChhHHHHhh-CCccEEEEcCCCCCCh
Q 018382          182 LRGGILGLGGVGHMGVLIAKAM-GHHVTVI-SSSDKKRVEAMEHLGADQYLVSSDATRMQEAA-DSLDYIIDTVPANHPL  258 (357)
Q Consensus       182 ~~VlI~G~g~~G~~ai~la~~~-g~~V~~~-~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~-~~~d~v~d~~g~~~~~  258 (357)
                      -+|.|+|+|.+|...+..++.. +++++++ ++++++.+.+.+++|...++  .+.+  +-+. ..+|+|+.++......
T Consensus         6 ~~igiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~--~~~~--~ll~~~~~D~V~i~tp~~~h~   81 (330)
T 3e9m_A            6 IRYGIMSTAQIVPRFVAGLRESAQAEVRGIASRRLENAQKMAKELAIPVAY--GSYE--ELCKDETIDIIYIPTYNQGHY   81 (330)
T ss_dssp             EEEEECSCCTTHHHHHHHHHHSSSEEEEEEBCSSSHHHHHHHHHTTCCCCB--SSHH--HHHHCTTCSEEEECCCGGGHH
T ss_pred             EEEEEECchHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHcCCCcee--CCHH--HHhcCCCCCEEEEcCCCHHHH
Confidence            3688999999999888887765 5677754 56667777776668864332  2221  1222 3799999999887556


Q ss_pred             HHHHhccccCCeEEEEccCCCCcccc---hHHH-hhccceEEEEeecC-HHHHHHHHHHHHhcCCCcc
Q 018382          259 EPYLSLLKLDGKLILTGVINTPMQFL---TPMV-MLGRKAITGSFIGS-MKETKEMLEFCREKGVTSM  321 (357)
Q Consensus       259 ~~~~~~l~~~G~~v~~g~~~~~~~~~---~~~~-~~~~~~i~g~~~~~-~~~~~~~~~~~~~~~l~~~  321 (357)
                      ..+..+++.+-. |.+.-+.....-.   +... -.++..+.-.+..+ ...++.+-+++.+|.+-.+
T Consensus        82 ~~~~~al~~gk~-vl~EKP~~~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i~~g~iG~i  148 (330)
T 3e9m_A           82 SAAKLALSQGKP-VLLEKPFTLNAAEAEELFAIAQEQGVFLMEAQKSVFLPITQKVKATIQEGGLGEI  148 (330)
T ss_dssp             HHHHHHHHTTCC-EEECSSCCSSHHHHHHHHHHHHHTTCCEEECCSGGGCHHHHHHHHHHHTTTTCSE
T ss_pred             HHHHHHHHCCCe-EEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEEhhhhCHHHHHHHHHHhCCCCCCe
Confidence            667777776544 4454332211111   1111 12333333322222 2456777788888877553

>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A

Probab=95.46  E-value=0.04  Score=49.05  Aligned_cols=87  Identities=18%  Similarity=0.253  Sum_probs=62.6

Q ss_pred             CCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCC----
Q 018382          180 SGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPAN----  255 (357)
Q Consensus       180 ~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~----  255 (357)
                      .|++|.|+|.|.+|..+++.++..|.+|++..++.++.      -+.....   ....++++....|+|+.++...    
T Consensus       138 ~g~tvGIiG~G~IG~~vA~~l~~~G~~V~~~dr~~~~~------~~~~~~~---~~~~l~ell~~aDiV~l~~Plt~~t~  208 (315)
T 3pp8_A          138 EEFSVGIMGAGVLGAKVAESLQAWGFPLRCWSRSRKSW------PGVESYV---GREELRAFLNQTRVLINLLPNTAQTV  208 (315)
T ss_dssp             TTCCEEEECCSHHHHHHHHHHHTTTCCEEEEESSCCCC------TTCEEEE---SHHHHHHHHHTCSEEEECCCCCGGGT
T ss_pred             CCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEcCCchhh------hhhhhhc---ccCCHHHHHhhCCEEEEecCCchhhh
Confidence            47899999999999999999999999999998875432      1222221   1234455566889998877632    


Q ss_pred             CCh-HHHHhccccCCeEEEEc
Q 018382          256 HPL-EPYLSLLKLDGKLILTG  275 (357)
Q Consensus       256 ~~~-~~~~~~l~~~G~~v~~g  275 (357)
                      ..+ ...++.|+++..++.++
T Consensus       209 ~li~~~~l~~mk~gailIN~a  229 (315)
T 3pp8_A          209 GIINSELLDQLPDGAYVLNLA  229 (315)
T ss_dssp             TCBSHHHHTTSCTTEEEEECS
T ss_pred             hhccHHHHhhCCCCCEEEECC
Confidence            133 45677888888888775

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	357
d1piwa1	192	b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehy	8e-32
d1uufa2	168	c.2.1.1 (A:145-312) Hypothetical protein YahK {Esc	2e-27
d1uufa1	179	b.35.1.2 (A:3-144,A:313-349) Hypothetical protein	6e-27
d1piwa2	168	c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase	2e-25
d2fzwa1	197	b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase	5e-25
d1cdoa1	199	b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase	4e-23
d1kola1	201	b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrog	4e-22
d1llua1	175	b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase	3e-20
d1e3ia1	202	b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase	9e-20
d1vj0a1	184	b.35.1.2 (A:2-155,A:338-367) Hypothetical protein	1e-19
d1llua2	166	c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudom	3e-19
d1f8fa1	194	b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydr	3e-19
d1rjwa2	168	c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillu	6e-19
d1h2ba2	172	c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeo	1e-17
d1p0fa1	198	b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydro	2e-16
d1vj0a2	182	c.2.1.1 (A:156-337) Hypothetical protein TM0436 {T	4e-16
d2jhfa1	198	b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase	1e-15
d1rjwa1	171	b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase	2e-15
d1p0fa2	174	c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog	5e-15
d1e3ia2	174	c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (	8e-15
d1e3ja1	178	b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sor	1e-14
d1f8fa2	174	c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {	2e-14
d2fzwa2	176	c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (	2e-14
d1jqba1	177	b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secon	4e-14
d2jhfa2	176	c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (	4e-14
d1pl8a1	185	b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sor	4e-14
d1jvba2	170	c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeo	1e-13
d1h2ba1	171	b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenas	3e-13
d1d1ta2	176	c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (	3e-13
d1jvba1	177	b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase	8e-13
d1cdoa2	175	c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Ga	8e-13
d1jqba2	174	c.2.1.1 (A:1140-1313) Bacterial secondary alcohol	4e-12
d1iz0a2	171	c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus	2e-08
d1tt7a1	162	b.35.1.2 (A:2-127,A:295-330) Hypothetical protein	2e-08
d1o89a1	146	b.35.1.2 (A:1-115,A:293-323) Hypothetical protein	5e-08
d1qora2	179	c.2.1.1 (A:113-291) Quinone oxidoreductase {Escher	2e-07
d1xa0a1	152	b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homo	3e-07
d1iz0a1	131	b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase	4e-07
d1yb5a2	174	c.2.1.1 (A:121-294) Quinone oxidoreductase {Human	2e-06
d1gu7a2	189	c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yea	2e-05
d1o89a2	177	c.2.1.1 (A:116-292) Hypothetical protein YhdH {Esc	2e-05
d1pqwa_	183	c.2.1.1 (A:) Putative enoyl reductase domain of po	8e-05
d1xa0a2	176	c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Ba	2e-04
d1o8ca2	77	c.2.1.1 (A:116-192) Hypothetical protein YhdH {Esc	2e-04

>d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 192

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  116 bits (291), Expect = 8e-32
 Identities = 59/177 (33%), Positives = 91/177 (51%), Gaps = 8/177 (4%)

Query: 12  GWAAKDPSGILSPY--TYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGH 69
           G A +      +P    Y  +     D+ IK+  CG+C +DIH      G    P+V GH
Sbjct: 9   GIAIQSHEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGNMKMPLVVGH 68

Query: 70  EVVGEVKEVGSEVS-NFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDG 128
           E+VG+V ++G + +   KVG +VGVG  V  C  C  C+ D E YC K + +Y+  Y DG
Sbjct: 69  EIVGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDG 128

Query: 129 KPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGG 185
             +QGG+A  + V + FVV IP+ + +E   P+  AGV      +   +++  +R  
Sbjct: 129 YVSQGGYANYVRVHEHFVVPIPENIWVE-TLPVGEAGVHE----AFERMEKGDVRYR 180

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Length = 168

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

 Score =  104 bits (259), Expect = 2e-27
 Identities = 73/165 (44%), Positives = 106/165 (64%), Gaps = 3/165 (1%)

Query: 155 LEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSD 214
           L   APLLCAG+T +SPL H+     G + G++G+GG+GHMG+ +A AMG HV   ++S+
Sbjct: 6   LAAVAPLLCAGITTYSPLRHWQAG-PGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSE 64

Query: 215 KKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPYLSLLKLDGKLILT 274
            KR EA + LGAD+ + S +A  M     S D+I++TV A H L+ + +LLK DG + L 
Sbjct: 65  AKR-EAAKALGADEVVNSRNADEMAAHLKSFDFILNTVAAPHNLDDFTTLLKRDGTMTLV 123

Query: 275 GVINTPMQFLTPM-VMLGRKAITGSFIGSMKETKEMLEFCREKGV 318
           G   TP +      +++ R+AI GS IG + ET+EML+FC E G+
Sbjct: 124 GAPATPHKSPEVFNLIMKRRAIAGSMIGGIPETQEMLDFCAEHGI 168

>d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Length = 179

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

 Score =  103 bits (256), Expect = 6e-27
 Identities = 59/163 (36%), Positives = 95/163 (58%), Gaps = 5/163 (3%)

Query: 8   RATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVP 67
           +A   ++AK P   L P   T R  G  DV I++ YCG+CH+D+HQ++++   + YP VP
Sbjct: 2   KAVGAYSAKQP---LEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVP 58

Query: 68  GHEVVGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTD 127
           GHE+VG V  VG +V  +  GD VGVG +V  C++C  CE  +E YC+    +YN    D
Sbjct: 59  GHEIVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPD 118

Query: 128 GK-PTQGGFAESMVVDQKFVVKIPDG-MALEQAAPLLCAGVTV 168
               T GG+++ +VV +++V++I    + + +A  +  A   +
Sbjct: 119 EPGHTLGGYSQQIVVHERYVLRIRVADIEMIRADQINEAYERM 161

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 168

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 98.9 bits (245), Expect = 2e-25
 Identities = 51/173 (29%), Positives = 81/173 (46%), Gaps = 9/173 (5%)

Query: 149 IPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVT 208
           IP       AAPLLC G+TV+SPL   G    G + GI+GLGG+G MG LI+KAM    T
Sbjct: 1   IPS----HLAAPLLCGGLTVYSPLVRNGCG-PGKKVGIVGLGGIGSMGTLISKAM-GAET 54

Query: 209 VISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYII---DTVPANHPLEPYLSLL 265
            + S   ++ E    +GAD Y+ + +     E       +I    +   +         +
Sbjct: 55  YVISRSSRKREDAMKMGADHYIATLEEGDWGEKYFDTFDLIVVCASSLTDIDFNIMPKAM 114

Query: 266 KLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGV 318
           K+ G+++   +             L   +I+ S +GS+KE  ++L+   EK +
Sbjct: 115 KVGGRIVSISIPEQHEMLSLKPYGLKAVSISYSALGSIKELNQLLKLVSEKDI 167

>d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 197

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score = 98.4 bits (244), Expect = 5e-25
 Identities = 37/187 (19%), Positives = 64/187 (34%), Gaps = 16/187 (8%)

Query: 8   RATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVP 67
           +A + W A  P   LS     +    A +V IK++   +CHTD + +        +P++ 
Sbjct: 8   KAAVAWEAGKP---LSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVIL 64

Query: 68  GHEVVGEVKEVGSEVSNFKVGDKVGVGVLVGC-------------CRNCRPCEADVEQYC 114
           GH   G V+ VG  V+  K GD V    +  C             C+  R  +       
Sbjct: 65  GHLGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPD 124

Query: 115 NKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSH 174
               ++              F+E  VV    V KI   + +++      +   +      
Sbjct: 125 GTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLIKVDEFVTHNLSFDEINKAFEL 184

Query: 175 FGLKQSG 181
               +S 
Sbjct: 185 MHSGKSI 191

>d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 199

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

 Score = 93.4 bits (231), Expect = 4e-23
 Identities = 45/195 (23%), Positives = 80/195 (41%), Gaps = 18/195 (9%)

Query: 1   MGSLDTERATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGM 60
           +G +   +A + W A  P   L      +    A ++ IK++  G+CHTD++ +      
Sbjct: 3   VGKVIKCKAAVAWEANKP---LVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHK 59

Query: 61  SNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWS 120
             +P+V GHE  G V+ VG  V+ F+ G+KV + + +  C  CR C++     C K   +
Sbjct: 60  DGFPVVLGHEGAGIVESVGPGVTEFQPGEKV-IPLFISQCGECRFCQSPKTNQCVKGWAN 118

Query: 121 YNDVYTDGKPT--------------QGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGV 166
            +      K T                 F++  VV+Q  V KI   + L++         
Sbjct: 119 ESPDVMSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSVKLDEFITHRMPLE 178

Query: 167 TVFSPLSHFGLKQSG 181
           +V   +      +  
Sbjct: 179 SVNDAIDLMKHGKCI 193

>d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 201

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

 Score = 90.7 bits (224), Expect = 4e-22
 Identities = 42/176 (23%), Positives = 63/176 (35%), Gaps = 10/176 (5%)

Query: 33  GAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVG 92
               V +KV+   IC +D H ++     +   +V GHE+ GEV E G +V N ++GD V 
Sbjct: 31  IEHGVILKVVSTNICGSDQHMVRGRT-TAQVGLVLGHEITGEVIEKGRDVENLQIGDLVS 89

Query: 93  VGVLVGCCRN--CRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVD--QKFVVK 148
           V   V C R   C+     V    N         Y D     GG AE ++V      ++K
Sbjct: 90  VPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTGGQAEYVLVPYADFNLLK 149

Query: 149 IPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMG 204
           +PD     +   +               L  +    G    G      +   K   
Sbjct: 150 LPDRDKAMEKINIAEVVGV-----QVISLDDAPRGYGEFDAGVPKKFVIDPHKTFS 200

>d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Length = 175

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 84.6 bits (208), Expect = 3e-20
 Identities = 41/141 (29%), Positives = 60/141 (42%), Gaps = 8/141 (5%)

Query: 33  GAEDVYIKVLYCGICHTDIHQIKNDLG-MSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKV 91
           G   V +K+   G+CHTD+H  + D       P +PGHE VG V  VGS V+  K GD+V
Sbjct: 29  GPGQVLVKIEASGVCHTDLHAAEGDWPVKPPLPFIPGHEGVGYVAAVGSGVTRVKEGDRV 88

Query: 92  GVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPD 151
           G+  L   C  C  C    E  C  +  +            GG+AE ++ D  +V  +P 
Sbjct: 89  GIPWLYTACGCCEHCLTGWETLCESQQNTGY-------SVNGGYAEYVLADPNYVGILPK 141

Query: 152 GMALEQAAPLLCAGVTVFSPL 172
            +        L     +   +
Sbjct: 142 NVKATIHPGKLDDINQILDQM 162

>d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Length = 202

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

 Score = 84.2 bits (207), Expect = 9e-20
 Identities = 40/179 (22%), Positives = 68/179 (37%), Gaps = 23/179 (12%)

Query: 8   RATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVP 67
           +A I W    P   L      +    A +V I+V+   +C TDI+        + +P+V 
Sbjct: 10  KAAIAWKTGSP---LCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPK-KKALFPVVL 65

Query: 68  GHEVVGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNK----------- 116
           GHE  G V+ VG  V+NFK GDKV +      C+ C+ C + +   C K           
Sbjct: 66  GHECAGIVESVGPGVTNFKPGDKV-IPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQ 124

Query: 117 -------KIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTV 168
                    ++              F++  VV +  + ++ D   L+          ++
Sbjct: 125 ELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARVDDEFDLDLLVTHALPFESI 183

>d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Length = 184

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

 Score = 83.4 bits (205), Expect = 1e-19
 Identities = 32/161 (19%), Positives = 67/161 (41%), Gaps = 9/161 (5%)

Query: 15  AKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGE 74
            +  +  L    + + +     + +++L  G+C +D+H  + +      P++ GHE  G 
Sbjct: 10  LEKFNQPLVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPRVPLPIILGHEGAGR 69

Query: 75  VKEVGSEVSNFKVGD----KVGVGVLVGCCRNCRPCEADVEQYC--NKKIWSYNDVYTDG 128
           V EV  E  +          + V      C  C  C+   E Y   N+K++  N   ++ 
Sbjct: 70  VVEVNGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGCSEY 129

Query: 129 KPTQGGFAESMVVD-QKFVVKIPDGMALEQAAPLLCAGVTV 168
              +G ++  +V+D +  V+K+ + +      PL  A   +
Sbjct: 130 PHLRGCYSSHIVLDPETDVLKVSEKITHR--LPLKEANKAL 168

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Length = 166

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 81.6 bits (200), Expect = 3e-19
 Identities = 47/164 (28%), Positives = 71/164 (43%), Gaps = 5/164 (3%)

Query: 155 LEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSD 214
             + AP+LCAGVTV+  L     +  G    I G+GG+GH+ V  A+AMG HV  I   D
Sbjct: 3   FAEIAPILCAGVTVYKGLKQTNAR-PGQWVAISGIGGLGHVAVQYARAMGLHVAAIDIDD 61

Query: 215 KKRVEAMEHLGADQYL---VSSDATRMQEAADSLDYIIDTVPANHPLEPYLSLLKLDGKL 271
            K  E    LGA   +          +Q        ++ T  +N      + + +  G +
Sbjct: 62  AKL-ELARKLGASLTVNARQEDPVEAIQRDIGGAHGVLVTAVSNSAFGQAIGMARRGGTI 120

Query: 272 ILTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCRE 315
            L G+           V+L    I GS +G+  + +E L+F  E
Sbjct: 121 ALVGLPPGDFPTPIFDVVLKGLHIAGSIVGTRADLQEALDFAGE 164

>d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 194

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

 Score = 82.3 bits (202), Expect = 3e-19
 Identities = 35/193 (18%), Positives = 60/193 (31%), Gaps = 44/193 (22%)

Query: 33  GAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVG 92
             ++V +KV+  G+CHTD+  +++       P V GHE  G ++ +G  V+  +VGD V 
Sbjct: 27  QGDEVLVKVVATGMCHTDLI-VRDQKYPVPLPAVLGHEGSGIIEAIGPNVTELQVGDHVV 85

Query: 93  VGVLVGCCRNCRPCEADVEQYCNKKIWSY----------------NDVYTDGKPTQGGFA 136
           +    G C  C  C      YC++                       V  D    Q  FA
Sbjct: 86  LSY--GYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFA 143

Query: 137 ESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMG 196
              +  +   VK+      +Q                                  +    
Sbjct: 144 TYALSRENNTVKVTKDFPFDQLVKFYAF-------------------------DEINQAA 178

Query: 197 VLIAKAMGHHVTV 209
           +   K +     +
Sbjct: 179 IDSRKGITLKPII 191

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Length = 168

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 80.9 bits (198), Expect = 6e-19
 Identities = 48/168 (28%), Positives = 76/168 (45%), Gaps = 3/168 (1%)

Query: 153 MALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISS 212
           ++ E+AAP+ CAGVT +  L   G K  G    I G+GG+GH+ V  AKAMG +V  +  
Sbjct: 1   LSFEEAAPIFCAGVTTYKALKVTGAK-PGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDI 59

Query: 213 SDKKRVEAMEHLGADQYLVSSDATR--MQEAADSLDYIIDTVPANHPLEPYLSLLKLDGK 270
            D+K   A E           +     M+E    +   + T  +    +   + ++  G 
Sbjct: 60  GDEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAVVTAVSKPAFQSAYNSIRRGGA 119

Query: 271 LILTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGV 318
            +L G+    M       +L    I GS +G+ K+ +E L+F  E  V
Sbjct: 120 CVLVGLPPEEMPIPIFDTVLNGIKIIGSIVGTRKDLQEALQFAAEGKV 167

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 172

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

 Score = 77.3 bits (189), Expect = 1e-17
 Identities = 37/166 (22%), Positives = 69/166 (41%), Gaps = 6/166 (3%)

Query: 155 LEQAAPLLCAGVTVFSPLSHFG-LKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSS 213
           L + APL  AG+T +  +         G    I+G+GG+GH+ V + K M     +    
Sbjct: 6   LVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDV 65

Query: 214 DKKRVEAMEHLGADQYLVSSD----ATRMQEAADSLDYIIDTVPANHPLEPYLSLLKLDG 269
            +++++  E LGAD  + +                ++  +D V +   ++    LL   G
Sbjct: 66  KEEKLKLAERLGADHVVDARRDPVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLGRMG 125

Query: 270 KLILTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCRE 315
           +LI+ G         T  V+    +  GS +G+  E  E++    +
Sbjct: 126 RLIIVGYGGELRFP-TIRVISSEVSFEGSLVGNYVELHELVTLALQ 170

>d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 198

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

 Score = 74.9 bits (183), Expect = 2e-16
 Identities = 49/204 (24%), Positives = 76/204 (37%), Gaps = 29/204 (14%)

Query: 6   TERATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPM 65
           T +A + W    P   LS  T T+    A +V IK+L  GIC +D   +K  +    +P+
Sbjct: 8   TCKAAVAWEPHKP---LSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIPS-KFPV 63

Query: 66  VPGHEVVGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYC-NKKIWSYNDV 124
           + GHE VG V+ +G+ V+  K GDKV + + V  C +CR C++    +C    + +   +
Sbjct: 64  ILGHEAVGVVESIGAGVTCVKPGDKV-IPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGL 122

Query: 125 YTDGK-------------PTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSP 171
             D                    F E  VV    V KI   + +            +   
Sbjct: 123 MADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKINVNFLVSTKLTLDQI--- 179

Query: 172 LSHFGLKQSGLRGGILGLGGVGHM 195
                           G G    M
Sbjct: 180 -------NKAFELLSSGQGVRSIM 196

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Length = 182

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

 Score = 73.4 bits (179), Expect = 4e-16
 Identities = 31/172 (18%), Positives = 65/172 (37%), Gaps = 11/172 (6%)

Query: 155 LEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSD 214
           L+  A  +C+G T +     +    +G    I G G +G  GV+IA+++G    ++ +  
Sbjct: 3   LDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGS 62

Query: 215 KKRVEAMEHLGADQYLVSSDATRMQEAADSL--------DYIIDTVPANHPLEPYLSLLK 266
             R++  E +GAD  L   + +  +     +        D+I++    +  L     LL+
Sbjct: 63  PNRLKLAEEIGADLTLNRRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLR 122

Query: 267 LDGKLILTGVINTPMQF---LTPMVMLGRKAITGSFIGSMKETKEMLEFCRE 315
             G   + GV          +   ++L      G ++       + +     
Sbjct: 123 RGGFYSVAGVAVPQDPVPFKVYEWLVLKNATFKGIWVSDTSHFVKTVSITSR 174

>d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 198

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

 Score = 72.6 bits (177), Expect = 1e-15
 Identities = 37/176 (21%), Positives = 58/176 (32%), Gaps = 19/176 (10%)

Query: 8   RATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVP 67
           +A + W  K P    S     +    A +V IK++  GIC +D H +   L      +  
Sbjct: 10  KAAVLWEEKKP---FSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTPLPVIAG 66

Query: 68  GHEVVGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTD 127
            HE  G V+ +G  V+  + GDKV       C +       +        +        D
Sbjct: 67  -HEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQD 125

Query: 128 -------------GKPTQGGFAESMVVDQKFVVKIPDGMALEQ--AAPLLCAGVTV 168
                               F++  VVD+  V KI    AL+      L    +  
Sbjct: 126 GTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAAFALDPLITHVLPFEKINE 181

>d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Length = 171

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 71.5 bits (174), Expect = 2e-15
 Identities = 45/137 (32%), Positives = 65/137 (47%), Gaps = 9/137 (6%)

Query: 33  GAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVP-GHEVVGEVKEVGSEVSNFKVGDKV 91
              +V +++  CG+CHTD+H    D  +     +  GHE VG V+EVG  V++ KVGD+V
Sbjct: 24  SYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGIVEEVGPGVTHLKVGDRV 83

Query: 92  GVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPD 151
           G+  L   C +C  C +  E  C  +  +   V        GG+AE       +VVKIPD
Sbjct: 84  GIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVD-------GGYAEYCRAAADYVVKIPD 136

Query: 152 GMALEQAAPLLCAGVTV 168
              +E   PL       
Sbjct: 137 NTIIE-VQPLEKINEVF 152

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

 Score = 70.3 bits (171), Expect = 5e-15
 Identities = 29/170 (17%), Positives = 60/170 (35%), Gaps = 10/170 (5%)

Query: 157 QAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKK 216
           ++  + C   T +    +      G    + GLGGVG   ++  KA G    +   + K 
Sbjct: 4   ESCLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKD 63

Query: 217 RVEAMEHLGADQYLVSSDATRMQEAADSL-------DYIIDTVPANHPLEPYLSLLKLDG 269
           +      LGA + L   D  +                 +         +    S     G
Sbjct: 64  KFPKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSG 123

Query: 270 KLILTGVINTPMQF-LTPMVMLGRKAITGSFIGS--MKETKEMLEFCREK 316
             ++ G+ +   +  L P+++L  +++ GS  G    +E   +++   +K
Sbjct: 124 VTVVLGLASPNERLPLDPLLLLTGRSLKGSVFGGFKGEEVSRLVDDYMKK 173

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

 Score = 69.6 bits (169), Expect = 8e-15
 Identities = 25/164 (15%), Positives = 54/164 (32%), Gaps = 6/164 (3%)

Query: 155 LEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSD 214
           LE+   + C   + +    +      G    + GLG VG   ++  K  G    +    +
Sbjct: 3   LERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDIN 62

Query: 215 KKRVEAMEHLGADQYLVSSDATRMQEAADS------LDYIIDTVPANHPLEPYLSLLKLD 268
            ++    + LGA   L   +  +  +   +      +DY +D       L+  +    L 
Sbjct: 63  GEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLG 122

Query: 269 GKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEF 312
                          +  + ++  ++I G+F G  K    +   
Sbjct: 123 WGSCTVVGAKVDEMTIPTVDVILGRSINGTFFGGWKSVDSVPNL 166

>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} Length = 178

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

 Score = 69.3 bits (168), Expect = 1e-14
 Identities = 35/149 (23%), Positives = 53/149 (35%), Gaps = 10/149 (6%)

Query: 33  GAEDVYIKVLYCGICHTDIHQIKNDLGM---SNYPMVPGHEVVGEVKEVGSEVSNFKVGD 89
             ++V +++ Y GIC +D+H  ++          PMV GHE  G V +VG  V + K GD
Sbjct: 24  KEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNVKHLKKGD 83

Query: 90  KVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKI 149
           +V V   V C R     E       +    +      +        A   V    F  K+
Sbjct: 84  RVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDDGN-------LARYYVHAADFCHKL 136

Query: 150 PDGMALEQAAPLLCAGVTVFSPLSHFGLK 178
           PD   ++Q                    K
Sbjct: 137 PDNCNVKQLVTHSFKLEQTVDAFEAARKK 165

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

 Score = 68.8 bits (167), Expect = 2e-14
 Identities = 33/166 (19%), Positives = 61/166 (36%), Gaps = 6/166 (3%)

Query: 153 MALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISS 212
           + +E   PL C   T      +             G G VG   +L AK  G  + +   
Sbjct: 1   VPIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVD 60

Query: 213 SDKKRVEAMEHLGADQYLVSSDATRMQEAAD----SLDYIIDTVPANHPLEPYLSLLKLD 268
             + R+E  + LGA   + S     +    +     +++ +++  +   L+  +  L + 
Sbjct: 61  IVESRLELAKQLGATHVINSKTQDPVAAIKEITDGGVNFALESTGSPEILKQGVDALGIL 120

Query: 269 GKLILTGVINTPMQFLTPM--VMLGRKAITGSFIGSMKETKEMLEF 312
           GK+ + G           +  ++LG K I G   GS    K + E 
Sbjct: 121 GKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVEGSGSPKKFIPEL 166

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score = 68.5 bits (166), Expect = 2e-14
 Identities = 24/166 (14%), Positives = 54/166 (32%), Gaps = 8/166 (4%)

Query: 155 LEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSD 214
           L++   L C   T +    +    + G    + GLGGVG   ++  K  G    +    +
Sbjct: 3   LDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDIN 62

Query: 215 KKRVEAMEHLGADQYLVSSDATRMQEAADSL------DYIIDTVPANHPLEPYLSLLKLD 268
           K +    +  GA + +   D ++  +           DY  + +     +   L      
Sbjct: 63  KDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKG 122

Query: 269 GKLILTGV--INTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEF 312
             + +      +       P  ++  +   G+  G  K  + + + 
Sbjct: 123 WGVSVVVGVAASGEEIATRPFQLVTGRTWKGTAFGGWKSVESVPKL 168

>d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Length = 177

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

 Score = 67.7 bits (164), Expect = 4e-14
 Identities = 37/170 (21%), Positives = 61/170 (35%), Gaps = 18/170 (10%)

Query: 33  GAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVG 92
           G+ D  ++ L    C +DIH +          M+ GHE VGEV EVGSEV +FK GD+V 
Sbjct: 23  GSYDAIVRPLAVSPCTSDIHTVFEGALGDRKNMILGHEAVGEVVEVGSEVKDFKPGDRVI 82

Query: 93  VGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVD--QKFVVKIP 150
           V             +A  +Q+ N  +  +           G F E   V+     +  +P
Sbjct: 83  V-PCTTPDWRSLEVQAGFQQHSNGMLAGWKFSN----FKDGVFGEYFHVNDADMNLAILP 137

Query: 151 DGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIA 200
             + L +    +  G                    ++       +  ++ 
Sbjct: 138 KDVDLSKLVTHVYHGFDHI-----------EEALLLMKDKPKDLIKAVVI 176

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

 Score = 67.7 bits (164), Expect = 4e-14
 Identities = 29/168 (17%), Positives = 60/168 (35%), Gaps = 8/168 (4%)

Query: 155 LEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSD 214
           LE+   + C   T +           G    + GLGGVG   ++  KA G    +    +
Sbjct: 3   LEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDIN 62

Query: 215 KKRVEAMEHLGADQYLVSSDATRMQEAADSL------DYIIDTVPANHPLEPYLSLLKLD 268
           K +    + +GA + +   D  +  +   +       D+  + +     +   LS  +  
Sbjct: 63  KDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEA 122

Query: 269 GKLILTGVINTPMQFLT--PMVMLGRKAITGSFIGSMKETKEMLEFCR 314
             + +   +    Q L+  PM++L  +   G+  G  K    + +   
Sbjct: 123 YGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVA 170

>d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Length = 185

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.0 bits (165), Expect = 4e-14
 Identities = 33/144 (22%), Positives = 53/144 (36%), Gaps = 11/144 (7%)

Query: 33  GAEDVYIKVLYCGICHTDIHQIKNDLGMS---NYPMVPGHEVVGEVKEVGSEVSNFKVGD 89
           G  +V +++   GIC +D+H  +     +     PMV GHE  G V++VGS V + K GD
Sbjct: 30  GPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSVKHLKPGD 89

Query: 90  KVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKI 149
           +V +        N   C+              +  +    P  G        +  F  K+
Sbjct: 90  RVAIEPGA-PRENDEFCKMGRYNLS------PSIFFCATPPDDGNLCRFYKHNAAFCYKL 142

Query: 150 PDGMALEQAAPL-LCAGVTVFSPL 172
           PD +         L   +  F   
Sbjct: 143 PDNVKPLVTHRFPLEKALEAFETF 166

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Length = 170

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

 Score = 65.9 bits (159), Expect = 1e-13
 Identities = 39/164 (23%), Positives = 70/164 (42%), Gaps = 5/164 (3%)

Query: 157 QAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKK 216
           +AAPL C+G+T +  +    L  +     +   GG+G M V IAKA+     +     ++
Sbjct: 5   EAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREE 64

Query: 217 RVEAMEHLGADQYLVSSDATRMQEAAD-----SLDYIIDTVPANHPLEPYLSLLKLDGKL 271
            VEA +  GAD  + +S    + E         +D +ID   +   L  Y   L   GK 
Sbjct: 65  AVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQGKY 124

Query: 272 ILTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCRE 315
           ++ G+    + +  P++ L      GS +G+  +   ++     
Sbjct: 125 VMVGLFGADLHYHAPLITLSEIQFVGSLVGNQSDFLGIMRLAEA 168

>d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 171

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

 Score = 65.1 bits (157), Expect = 3e-13
 Identities = 39/149 (26%), Positives = 59/149 (39%), Gaps = 11/149 (7%)

Query: 33  GAEDVYIKVLYCGICHTDIHQIKNDLGMSNYP---MVPGHEVVGEVKEVGSEVSNFKVGD 89
           G  DV +++   G+CHTD+H ++        P      GHE VG ++EV   V   + GD
Sbjct: 24  GRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEEVAEGVEGLEKGD 83

Query: 90  KVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKI 149
            V +         C  C A  + +C    +        G    GGFAE M    + V+K+
Sbjct: 84  PV-ILHPAVTDGTCLACRAGEDMHCENLEFP-------GLNIDGGFAEFMRTSHRSVIKL 135

Query: 150 PDGMALEQAAPLLCAGVTVFSPLSHFGLK 178
           P  + +E     L     V   L    + 
Sbjct: 136 PKDVRVEVDIHKLDEINDVLERLEKGEVL 164

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score = 65.3 bits (158), Expect = 3e-13
 Identities = 29/166 (17%), Positives = 57/166 (34%), Gaps = 8/166 (4%)

Query: 155 LEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSD 214
            E+   + C   T +      G  + G    + GLGGVG   ++  K+ G    +    +
Sbjct: 4   PEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLN 63

Query: 215 KKRVEAMEHLGADQYLVSSDATRMQEAADSL-------DYIIDTVPANHPLEPYLSLLKL 267
           K + E    +GA + +   D+T+      S                    ++   S    
Sbjct: 64  KDKFEKAMAVGATECISPKDSTKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMN 123

Query: 268 DGKLILTGVINTPMQFLT-PMVMLGRKAITGSFIGSMKETKEMLEF 312
            G  ++ GV  +       PM++   +   G   G +K   ++ + 
Sbjct: 124 YGTSVVVGVPPSAKMLTYDPMLLFTGRTWKGCVFGGLKSRDDVPKL 169

>d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Length = 177

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

 Score = 63.8 bits (154), Expect = 8e-13
 Identities = 38/186 (20%), Positives = 61/186 (32%), Gaps = 42/186 (22%)

Query: 33  GAEDVYIKVLYCGICHTDIHQIKNDLGMS--------NYPMVPGHEVVGEVKEVGSEVSN 84
               V IKV   G+CH+D+H  +   G            P+  GHE+ G+++EVG EV  
Sbjct: 24  KGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDEVVG 83

Query: 85  FKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVV-DQ 143
           +  GD V V        N    E +       +    +     G    G +AE ++V   
Sbjct: 84  YSKGDLVAV--------NPWQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYVIVPHY 135

Query: 144 KFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAM 203
           K++ K+     +      L                                  +   KA+
Sbjct: 136 KYMYKLRRVKPMITKTMKLEE-------------------------ANEAIDNLENFKAI 170

Query: 204 GHHVTV 209
           G  V +
Sbjct: 171 GRQVLI 176

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 175

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

 Score = 63.9 bits (154), Expect = 8e-13
 Identities = 32/172 (18%), Positives = 61/172 (35%), Gaps = 10/172 (5%)

Query: 155 LEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSD 214
           L+    L C   T F    +    + G    + GLG VG   V+   + G    +    +
Sbjct: 3   LDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLN 62

Query: 215 KKRVEAMEHLGADQYLVSSD------ATRMQEAADSLDYIIDTVPANHPLEP-YLSLLKL 267
             + E  +  GA  ++  +D          +     +D+ ++ V     +     S LK 
Sbjct: 63  PDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKG 122

Query: 268 DGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETK---EMLEFCREK 316
            G  +L G  +       P+ ++  +   GS  G  K      +M++   +K
Sbjct: 123 WGVSVLVGWTDLHDVATRPIQLIAGRTWKGSMFGGFKGKDGVPKMVKAYLDK 174

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

 Score = 61.9 bits (149), Expect = 4e-12
 Identities = 37/171 (21%), Positives = 59/171 (34%), Gaps = 18/171 (10%)

Query: 153 MALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGG----ILGLGGVGHMGVLIAKAMGHHVT 208
           M LE A  +     T F      G + + +  G    ++G+G VG MG+  AK  G    
Sbjct: 1   MPLENAVMITDMMTTGF-----HGAELADIEMGSSVVVIGIGAVGLMGIAGAKLRGAGRI 55

Query: 209 VISSSDKKRVEAMEHLGADQYLVSSDATRMQEAAD-----SLDYIIDTVPANHPLEPYLS 263
           +   S    VEA +  GA   L   +     +         +D +I     +  L   + 
Sbjct: 56  IGVGSRPICVEAAKFYGATDILNYKNGHIEDQVMKLTNGKGVDRVIMAGGGSETLSQAVK 115

Query: 264 LLKLDGKLILTGVINTPMQFLTPMV----MLGRKAITGSFIGSMKETKEML 310
           ++K  G +       +    L P V     +  K I G      +   E L
Sbjct: 116 MVKPGGIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGLCPGGRLRAERL 166

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} Length = 171

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

 Score = 51.2 bits (121), Expect = 2e-08
 Identities = 25/162 (15%), Positives = 55/162 (33%), Gaps = 8/162 (4%)

Query: 153 MALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGG--ILGLGGVGHMGVLIAKAMGHHVTVI 210
           ++ E+AA    + +T      +  LK++  R G  +L     G +G    +        +
Sbjct: 1   LSPEEAAAFPVSFLTA-----YLALKRAQARPGEKVLVQAAAGALGTAAVQVARAMGLRV 55

Query: 211 SSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPYLSLLKLDGK 270
            ++  +  +    L       ++ A   + A       +        +E  L LL   G+
Sbjct: 56  LAAASRPEKLALPLALGAEEAATYAEVPERAKAWGGLDLVLEVRGKEVEESLGLLAHGGR 115

Query: 271 LILTGVIN-TPMQFLTPMVMLGRKAITGSFIGSMKETKEMLE 311
           L+  G             +M    A+ G ++  +     ++E
Sbjct: 116 LVYIGAAEGEVAPIPPLRLMRRNLAVLGFWLTPLLREGALVE 157

>d1tt7a1 b.35.1.2 (A:2-127,A:295-330) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} Length = 162

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

 Score = 51.0 bits (121), Expect = 2e-08
 Identities = 23/167 (13%), Positives = 42/167 (25%), Gaps = 35/167 (20%)

Query: 33  GAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVG 92
             + V IKV Y GI + D    K    +     +                          
Sbjct: 29  PKDGVLIKVAYSGINYKDGLAGKAGGNIVREYPL-------------------------- 62

Query: 93  VGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDG 152
               +          +  +    +        Y  G    GG +E   V   ++V +P  
Sbjct: 63  ----ILGIDAAGTVVSSNDPRFAEGDEVIATSYELGVSRDGGLSEYASVPGDWLVPLPQN 118

Query: 153 MALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLI 199
           ++L++A       +                   IL     G   V++
Sbjct: 119 LSLKEAMVDQLLTIVDREVSLEETPGALKD---ILQNRIQG--RVIV 160

>d1o89a1 b.35.1.2 (A:1-115,A:293-323) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} Length = 146

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

 Score = 49.1 bits (116), Expect = 5e-08
 Identities = 21/136 (15%), Positives = 36/136 (26%), Gaps = 32/136 (23%)

Query: 33  GAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPM-VPGHEVVGEVKEVGSEVSNFKVGDKV 91
              DV + V +  + + D   I     +      +PG +  G V+               
Sbjct: 26  PEGDVTVDVHWSSLNYKDALAITGKGKIIRNFPMIPGIDFAGTVRTSEDPRF------HA 79

Query: 92  GVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPD 151
           G  VL+                                   GG AE   V   ++V +P 
Sbjct: 80  GQEVLLTGWGVGEN-------------------------HWGGLAEQARVKGDWLVAMPQ 114

Query: 152 GMALEQAAPLLCAGVT 167
           G A ++ +        
Sbjct: 115 GQAAKEISLSEAPNFA 130

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} Length = 179

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

 Score = 48.5 bits (114), Expect = 2e-07
 Identities = 30/168 (17%), Positives = 61/168 (36%), Gaps = 12/168 (7%)

Query: 155 LEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGG-VGHMGVLIAKAMGHHVTVISSS 213
            EQAA     G+TV+  L      +   +       G VG +    AKA+G  +     +
Sbjct: 3   FEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGT 62

Query: 214 DKKRVEAMEHLGADQYLVSSD---ATRMQEAAD-SLDYIIDTVPANHPLEPYLSLLKLDG 269
            +K   A++  GA Q +   +     R++E        ++         E  L  L+  G
Sbjct: 63  AQKAQSALKA-GAWQVINYREEDLVERLKEITGGKKVRVVYDSVGRDTWERSLDCLQRRG 121

Query: 270 KLILTGVINTPMQFLTPMVMLGRKAIT------GSFIGSMKETKEMLE 311
            ++  G  +  +  +   ++  + ++         +I + +E  E   
Sbjct: 122 LMVSFGNSSGAVTGVNLGILNQKGSLYVTRPSLQGYITTREELTEASN 169

>d1xa0a1 b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} Length = 152

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 47.2 bits (111), Expect = 3e-07
 Identities = 21/136 (15%), Positives = 39/136 (28%), Gaps = 31/136 (22%)

Query: 33  GAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVG 92
              DV ++V Y  + + D      D G           +      V S+   F+ GD+V 
Sbjct: 29  PEGDVLVRVHYSSVNYKDGLASIPD-GKIVKTYPFVPGIDLAGVVVSSQHPRFREGDEV- 86

Query: 93  VGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDG 152
                                                   GG++E   +  +++V +P G
Sbjct: 87  ------IATGYEIGV----------------------THFGGYSEYARLHGEWLVPLPKG 118

Query: 153 MALEQAAPLLCAGVTV 168
           +    A  +  A +  
Sbjct: 119 LE-RIAQEISLAELPQ 133

>d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} Length = 131

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

 Score = 46.4 bits (109), Expect = 4e-07
 Identities = 19/113 (16%), Positives = 32/113 (28%), Gaps = 11/113 (9%)

Query: 64  PMVPGHEVVGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYND 123
           P     EVV  V+ VG   ++  +                R     +       +     
Sbjct: 21  PEAEEGEVVLRVEAVGLNFADHLMRL---------GAYLTRLHPPFIPGMEVVGVVEGRR 71

Query: 124 VYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFG 176
                   QGG AE + V +  ++ +P+G  +             F  L   G
Sbjct: 72  YA--ALVPQGGLAERVAVPKGALLPLPEGRPVVGPVFPFAEAEAAFRALLDRG 122

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.0 bits (105), Expect = 2e-06
 Identities = 27/169 (15%), Positives = 59/169 (34%), Gaps = 7/169 (4%)

Query: 153 MALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISS 212
           +  +Q A +     T +  L H    ++G    + G  G   +             + ++
Sbjct: 1   LDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTA 60

Query: 213 SDKKRVEAMEHLGADQYLVSSDATRMQEAADSL----DYIIDTVPANHPLEPYLSLLKLD 268
             ++  + +   GA +     +   + +    +      II  + AN  L   LSLL   
Sbjct: 61  GTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSLLSHG 120

Query: 269 GKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSM--KETKEMLEFCRE 315
           G++I+ G     ++      M    +I G  + S   +E ++     + 
Sbjct: 121 GRVIVVGSRG-TIEINPRDTMAKESSIIGVTLFSSTKEEFQQYAAALQA 168

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 189

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

 Score = 42.3 bits (98), Expect = 2e-05
 Identities = 23/171 (13%), Positives = 47/171 (27%), Gaps = 15/171 (8%)

Query: 153 MALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGL--GGVGHMGVLIAKAMGHHVTVI 210
           + + Q A +    +T +  L+H+     G    I       VG     I K +  +   +
Sbjct: 1   LTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISV 60

Query: 211 SSSDKKRVEAMEH---LGADQYLVSSDATRMQEAA----------DSLDYIIDTVPANHP 257
                   E +     LGA Q +        +                   ++ V     
Sbjct: 61  IRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKSS 120

Query: 258 LEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKE 308
                 L      L   G+   P+   T + +       G ++  + +  +
Sbjct: 121 TGIARKLNNNGLMLTYGGMSFQPVTIPTSLYIFKNFTSAGFWVTELLKNNK 171

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} Length = 177

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

 Score = 42.2 bits (98), Expect = 2e-05
 Identities = 28/168 (16%), Positives = 55/168 (32%), Gaps = 12/168 (7%)

Query: 153 MALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGG------ILGLGGVGHMGVLIAKAMGHH 206
           +   +A  +  AG T    L    L+ +G+R            GGVG   V +   +G+ 
Sbjct: 1   LDARKAMIIGTAGFTAM--LCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQ 58

Query: 207 VTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPYLSLLK 266
           V  +S  +      ++ LGA + L   +    +     +         +  L   L+ + 
Sbjct: 59  VVAVSGRESTHEY-LKSLGASRVLPRDEFAESRPLEKQVWAGAIDTVGDKVLAKVLAQMN 117

Query: 267 LDGKLILTGVINTPMQFLTPM-VMLGRKAITGSFIG--SMKETKEMLE 311
             G +   G+        T M  +L    + G        +   +  +
Sbjct: 118 YGGCVAACGLAGGFTLPTTVMPFILRNVRLQGVDSVMTPPERRAQAWQ 165

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 183

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 40.8 bits (94), Expect = 8e-05
 Identities = 26/166 (15%), Positives = 52/166 (31%), Gaps = 10/166 (6%)

Query: 156 EQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDK 215
            +AA    A +T +  L   G    G R  I    G   M  +    M       ++   
Sbjct: 1   NEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSD 60

Query: 216 KRVEAMEHLGADQYLVSSDATRMQEAADSLD----YIIDTVPANHPLEPYLSLLKLDGKL 271
            + E +  LG +    S       E  +  D     ++    A   ++  + +L   G+ 
Sbjct: 61  AKREMLSRLGVEYVGDSRSVDFADEILELTDGYGVDVVLNSLAGEAIQRGVQILAPGGRF 120

Query: 272 ILTGVINTPMQFLTPMVMLGRKA------ITGSFIGSMKETKEMLE 311
           I  G  +        +  L + A      +  +        +++L+
Sbjct: 121 IELGKKDVYADASLGLAALAKSASFSVVDLDLNLKLQPARYRQLLQ 166

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 39.8 bits (92), Expect = 2e-04
 Identities = 29/170 (17%), Positives = 52/170 (30%), Gaps = 14/170 (8%)

Query: 153 MALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGG------ILGLGGVGHMGVLIAKAMGHH 206
           + L++A  +  AG T    LS   L++ GL             GGVG + V +    G+ 
Sbjct: 1   LTLKEAMAIGTAGFTAA--LSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGYT 58

Query: 207 VTVISSSDKKRVEAMEHLGADQ--YLVSSDATRMQEAADSLDYIIDTVPANHPLEPYLSL 264
           V   +    +          +                       +D V         LS 
Sbjct: 59  VEASTGKAAEHDYLRVLGAKEVLAREDVMAERIRPLDKQRWAAAVDPVGGRTL-ATVLSR 117

Query: 265 LKLDGKLILTGVINTPMQFLTPM-VMLGRKAITG--SFIGSMKETKEMLE 311
           ++  G + ++G+        T    +L   ++ G  S    M     + E
Sbjct: 118 MRYGGAVAVSGLTGGAEVPTTVHPFILRGVSLLGIDSVYCPMDLRLRIWE 167

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} Length = 77

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

 Score = 37.6 bits (87), Expect = 2e-04
 Identities = 17/78 (21%), Positives = 29/78 (37%), Gaps = 5/78 (6%)

Query: 153 MALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGG----ILGLGGVGHMGVLIAKAMGHHVT 208
           +   +A  +  AG T    +          + G        GGVG   V +   +G+ V 
Sbjct: 1   LDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVV 60

Query: 209 VISSSDKKRVEAMEHLGA 226
            +S  +    E ++ LGA
Sbjct: 61  AVSGRESTH-EYLKSLGA 77

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	357
d1piwa1	192	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	100.0
d1llua1	175	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	100.0
d1cdoa1	199	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	100.0
d1e3ja1	178	Ketose reductase (sorbitol dehydrogenase) {Silverl	100.0
d2fzwa1	197	Alcohol dehydrogenase {Human (Homo sapiens), diffe	100.0
d1f8fa1	194	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	100.0
d1h2ba1	171	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	100.0
d1e3ia1	202	Alcohol dehydrogenase {Mouse (Mus musculus), class	100.0
d1vj0a1	184	Hypothetical protein TM0436 {Thermotoga maritima [	100.0
d1rjwa1	171	Alcohol dehydrogenase {Bacillus stearothermophilus	100.0
d1pl8a1	185	Ketose reductase (sorbitol dehydrogenase) {Human (	99.98
d1uufa1	179	Hypothetical protein YahK {Escherichia coli [TaxId	99.98
d1kola1	201	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	99.97
d1jqba1	177	Bacterial secondary alcohol dehydrogenase {Clostri	99.97
d1p0fa1	198	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	99.97
d2jhfa1	198	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	99.97
d1jvba1	177	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	99.97
d1yb5a1	150	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	99.96
d1qora1	147	Quinone oxidoreductase {Escherichia coli [TaxId: 5	99.96
d1iz0a1	131	Quinone oxidoreductase {Thermus thermophilus [TaxI	99.94
d1xa0a1	152	B. subtilis YhfP homologue {Bacillus stearothermop	99.94
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	99.94
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	99.94
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	99.93
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	99.93
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	99.93
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	99.93
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	99.93
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	99.93
d1tt7a1	162	Hypothetical protein YhfP {Bacillus subtilis [TaxI	99.92
d1o89a1	146	Hypothetical protein YhdH {Escherichia coli [TaxId	99.92
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	99.92
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	99.91
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	99.91
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	99.91
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	99.91
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	99.91
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	99.91
d1gu7a1	175	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	99.91
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	99.91
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	99.9
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	99.9
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	99.9
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	99.9
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.89
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	99.88
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	99.88
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.88
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	99.87
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	99.87
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	99.83
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	99.83
d1v3va1	147	Leukotriene b4 12-hydroxydehydrogenase/prostagland	99.63
d1vj1a1	166	Putative zinc-binding alcohol dehydrogenase {Mouse	99.62
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	99.47
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	98.54
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	98.25
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	98.24
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	98.0
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	97.92
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	97.9
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	97.87
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	97.86
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	97.85
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.81
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	97.77
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	97.75
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	97.75
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	97.74
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	97.74
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	97.71
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	97.71
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	97.7
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.68
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	97.66
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	97.66
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	97.66
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	97.65
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	97.63
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	97.62
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	97.57
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	97.56
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	97.56
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	97.55
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	97.53
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	97.52
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	97.49
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	97.49
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	97.46
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	97.45
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	97.42
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	97.42
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	97.38
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	97.38
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	97.37
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	97.37
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	97.36
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	97.36
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	97.35
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	97.34
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	97.32
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	97.32
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	97.31
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	97.31
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	97.3
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	97.29
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	97.29
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	97.29
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	97.28
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	97.23
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	97.22
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	97.21
d1yb2a1	250	Hypothetical protein Ta0852 {Thermoplasma acidophi	97.15
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	97.15
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	97.12
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	97.12
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	97.1
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	97.06
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	97.05
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	96.96
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	96.96
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	96.96
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	96.94
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	96.93
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	96.84
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	96.8
d1r18a_	223	Protein-L-isoaspartyl O-methyltransferase {Fruit f	96.79
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	96.78
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	96.72
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	96.71
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	96.67
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	96.67
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	96.57
d1o54a_	266	Hypothetical protein TM0748 {Thermotoga maritima [	96.56
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	96.54
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	96.53
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	96.52
d1nkva_	245	Hypothetical Protein YjhP {Escherichia coli [TaxId	96.52
d1g8aa_	227	Fibrillarin homologue {Archaeon Pyrococcus horikos	96.46
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	96.42
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	96.4
d1kpga_	285	CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}	96.38
d1i9ga_	264	Probable methyltransferase Rv2118c {Mycobacterium	96.32
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	96.31
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	96.31
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	96.29
d2fk8a1	280	Methoxy mycolic acid synthase 4, Mma4 {Mycobacteri	96.21
d1kpia_	291	CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}	96.21
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	96.18
d2b25a1	324	Hypothetical protein FLJ20628 {Human (Homo sapiens	96.16
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	96.16
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	96.13
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	96.12
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	96.06
d2o57a1	282	Putative sarcosine dimethylglycine methyltransfera	96.04
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	96.02
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	95.99
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	95.86
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	95.86
d1xxla_	234	Hypothetical protein YcgJ {Bacillus subtilis [TaxI	95.78
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	95.76
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.72
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	95.72
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	95.71
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	95.68
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	95.66
d2avna1	246	Hypothetical methyltransferase TM1389 {Thermotoga	95.66
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	95.63
d1zx0a1	229	Guanidinoacetate methyltransferase {Human (Homo sa	95.63
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	95.63
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	95.62
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	95.61
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	95.54
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	95.5
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	95.49
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	95.47
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	95.44
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	95.39
d1g8sa_	230	Fibrillarin homologue {Archaeon Methanococcus jann	95.36
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	95.33
d2g82a1	168	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	95.29
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	95.26
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	95.26
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	95.21
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	95.21
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	95.21
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	95.2
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	95.19
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.19
d1p91a_	268	rRNA methyltransferase RlmA {Escherichia coli [Tax	95.15
d1cf2o1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	95.13
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	95.1
d1xeaa1	167	Putative oxidoreductase VCA1048 {Vibrio cholerae [	95.08
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	95.07
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	95.04
d1u2za_	406	Catalytic, N-terminal domain of histone methyltran	94.94
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	94.86
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	94.86
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	94.82
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	94.76
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	94.62
d1iy9a_	274	Spermidine synthase {Bacillus subtilis [TaxId: 142	94.6
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	94.53
d1dssg1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	94.47
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	94.41
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	94.38
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	94.35
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	94.33
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	94.29
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	94.06
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	94.06
d2o07a1	285	Spermidine synthase {Human (Homo sapiens) [TaxId:	94.06
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	94.05
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	94.05
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	94.03
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	94.0
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	93.92
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	93.89
d1uira_	312	Spermidine synthase {Thermus thermophilus [TaxId:	93.88
d1xvaa_	292	Glycine N-methyltransferase {Rat (Rattus norvegicu	93.85
d1u8fo1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	93.84
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	93.84
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	93.78
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	93.65
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	93.63
d1mjfa_	276	Putative spermidine synthetase PF0127 (SpeE) {Arch	93.63
d2b2ca1	312	Spermidine synthase {Caenorhabditis elegans [TaxId	93.62
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	93.54
d1zh8a1	181	Hypothetical protein TM0312 {Thermotoga maritima [	93.5
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	93.46
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	93.44
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	93.39
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	93.39
d1xj5a_	290	Spermidine synthase {Thale cress (Arabidopsis thal	93.35
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	93.34
d1obfo1	173	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	93.33
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	93.29
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	93.28
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	93.25
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	93.22
d1tlta1	164	Virulence factor MviM {Escherichia coli [TaxId: 56	93.22
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	93.22
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	93.19
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	93.19
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	93.18
d1im8a_	225	Hypothetical protein HI0319 (YecO) {Haemophilus in	93.17
d1inla_	295	Spermidine synthase {Thermotoga maritima [TaxId: 2	93.13
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	93.06
d2b4ro1	166	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	93.03
d1gado1	166	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	92.98
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	92.97
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	92.92
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	92.89
d1x7da_	340	Ornithine cyclodeaminase {Pseudomonas putida [TaxI	92.81
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	92.77
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	92.66
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	92.63
d1hdgo1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	92.62
d1xtpa_	254	Hypothetical protein Lmaj004091aaa (LmjF30.0810) {	92.54
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	92.52
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	92.51
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	92.47
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	92.46
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	92.42
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	92.4
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	92.39
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	92.34
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	92.31
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	92.28
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	92.28
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	92.25
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	92.24
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	92.22
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	92.17
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	92.11
d1h6da1	221	Glucose-fructose oxidoreductase, N-terminal domain	92.07
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	91.98
d2p7ia1	225	Hypothetical protein ECA1738 {Erwinia carotovora [	91.92
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	91.89
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	91.82
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	91.62
d1nw3a_	328	Catalytic, N-terminal domain of histone methyltran	91.57
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	91.54
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	91.5
d1tw3a2	253	Carminomycin 4-O-methyltransferase {Streptomyces p	91.45
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	91.4
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	91.4
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	91.37
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	91.37
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	91.36
d2frna1	260	Hypothetical protein PH0793 {Pyrococcus horikoshii	91.35
d1omoa_	320	Archaeal alanine dehydrogenase {Archaeon Archaeogl	91.22
d2ex4a1	222	Adrenal gland protein AD-003 (C9orf32) {Human (Hom	90.97
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	90.95
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	90.89
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	90.83
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	90.81
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	90.77
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	90.72
d1ri5a_	252	mRNA cap (Guanine N-7) methyltransferase {Fungus (	90.68
d1rm4a1	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	90.68
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	90.53
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	90.38
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	90.2
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	89.93
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	89.7
d3cmco1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	89.54
d1trba1	190	Thioredoxin reductase {Escherichia coli [TaxId: 56	89.47
d2bhsa1	292	O-acetylserine sulfhydrylase (Cysteine synthase) {	89.47
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	89.27
d1fl2a1	184	Alkyl hydroperoxide reductase subunit F (AhpF), C-	89.27
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	89.26
d2gh1a1	281	Methyltransferase BC2162 {Bacillus cereus [TaxId:	89.24
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	89.18
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	89.11
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	89.06
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	89.01
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	89.01
d1g6q1_	328	Arginine methyltransferase, HMT1 {Baker's yeast (S	88.95
d1ws6a1	171	Methyltransferase TTHA0928 {Thermus thermophilus [	88.88
d1dusa_	194	Hypothetical protein MJ0882 {Archaeon Methanococcu	88.85
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	88.83
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	88.8
d1susa1	227	Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicag	88.76
d1dxla1	221	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	88.74
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	88.73
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	88.72
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	88.64
d1gtma1	239	Glutamate dehydrogenase {Archaeon Pyrococcus furio	88.5
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	88.36
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	88.34
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	88.33
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	88.15
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	88.14
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	88.12
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	88.12
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	87.88
d2dula1	375	N(2),N(2)-dimethylguanosine tRNA methyltransferase	87.6
d1sqga2	284	Ribosomal RNA small subunit methyltransferase B, R	87.57
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	87.48
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	87.36
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	87.34
d1gesa1	217	Glutathione reductase {Escherichia coli [TaxId: 56	87.14
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	86.97
d2avda1	219	COMT domain-containing protein 1, COMTD1 {Human (H	86.83
d1jbqa_	355	Cystathionine beta-synthase {Human (Homo sapiens)	86.75
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	86.6
d1pn0a1	360	Phenol hydroxylase {Soil-living yeast (Trichosporo	86.37
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	86.29
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	86.21
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	86.18
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	85.96
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	85.95
d1ebda1	223	Dihydrolipoamide dehydrogenase {Bacillus stearothe	85.94
d1v59a1	233	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	85.79
d1lvla1	220	Dihydrolipoamide dehydrogenase {Pseudomonas putida	85.55
d1ojta1	229	Dihydrolipoamide dehydrogenase {Neisseria meningit	85.46
d1k3ta1	190	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	85.46
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	85.29
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	85.28
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	85.25
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	85.08
d1y0pa2	308	Flavocytochrome c3 (respiratory fumarate reductase	84.77
d1vdca1	192	Thioredoxin reductase {Mouse-ear cress (Arabidopsi	84.63
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	84.59
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	84.49
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	84.4
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	84.15
d3grsa1	221	Glutathione reductase {Human (Homo sapiens) [TaxId	84.13
d1ixka_	313	Hypothetical methyltransferase PH1374 {Archaeon Py	83.97
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	83.76
d1np3a2	182	Class I ketol-acid reductoisomerase (KARI) {Pseudo	83.53
d2fcaa1	204	tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacil	83.53
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	83.11
d1vl6a1	222	Malate oxidoreductase (malic enzyme) {Thermotoga m	82.97
d3lada1	229	Dihydrolipoamide dehydrogenase {Azotobacter vinela	82.95
d1qo8a2	317	Flavocytochrome c3 (respiratory fumarate reductase	82.2
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	82.15
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	81.93
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	81.73
d2g17a1	179	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	81.58
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	81.46
d1cjca2	230	Adrenodoxin reductase of mitochondrial p450 system	81.42
d1z7wa1	320	O-acetylserine sulfhydrylase (Cysteine synthase) {	81.4
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	81.22
d1d4ca2	322	Flavocytochrome c3 (respiratory fumarate reductase	81.0
d1lqta2	239	Ferredoxin:NADP reductase FprA {Mycobacterium tube	80.9
d1h6va1	235	Mammalian thioredoxin reductase {Rat (Rattus norve	80.64
d1qzza2	256	Aclacinomycin-10-hydroxylase RdmB {Streptomyces pu	80.52
d2esra1	152	Putative methyltransferase SPy1538 {Streptococcus	80.22
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	80.22
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	80.08
d2bs2a2	336	Fumarate reductase {Wolinella succinogenes [TaxId:	80.03
d1tdja1	331	Threonine deaminase {Escherichia coli [TaxId: 562]	80.03

>d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=4.8e-36  Score=249.82  Aligned_cols=183  Identities=31%  Similarity=0.503  Sum_probs=162.2

Q ss_pred             chhhhheeeehccCCC--CCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCC
Q 018382            4 LDTERATIGWAAKDPS--GILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSE   81 (357)
Q Consensus         4 ~~~~~~~~~~~~~~~~--~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~   81 (357)
                      |++|.++++|....+.  ..+++.+++.++++++|||||+.++|+|++|++++.|.++...+|+++|||++|+|+++|++
T Consensus         1 m~~P~~~ka~~~~~~~~~~~~~~~~~~p~p~~~~eVlVkv~a~giC~sDl~~~~g~~~~~~~P~i~GHE~~G~Vv~vG~~   80 (192)
T d1piwa1           1 MSYPEKFEGIAIQSHEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGNMKMPLVVGHEIVGKVVKLGPK   80 (192)
T ss_dssp             CCTTTCEEEEEECCSSSTTSCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTTTSCCCSSEECCCCEEEEEEEECTT
T ss_pred             CCCCceeEEEEEeCCCcCCcceEeeccCCCCCCCeEEEEEeeeCCCcchHHHHcCCCCCCCCCcCcccccccchhhcccc
Confidence            4678999999985332  34667788877889999999999999999999999999888889999999999999999999


Q ss_pred             C-CCCCCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCcccccc
Q 018382           82 V-SNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAP  160 (357)
Q Consensus        82 v-~~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~  160 (357)
                      + +.+++||||++.+....|+.|..|+.|.++.|.+....+.....+|...+|+|+||+++++..++++|+++++++|+.
T Consensus        81 v~~~~k~GdrV~~~~~~~~c~~c~~c~~g~~~~C~~~~~~~~~~~~~G~~~~Ggfaey~~v~~~~~~~iP~~l~~e~Aal  160 (192)
T d1piwa1          81 SNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPIPENIWVETLPV  160 (192)
T ss_dssp             CCSSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSCBCTTSCBCCCSSBSEEEEEGGGEEECCTTCCEEEEES
T ss_pred             cccccCCCCeeeEeeeccCCCCchhhhcCCcccccccccccccccccccccccceeeEEEeehHHeEECCCCCCHHHHHH
Confidence            8 569999999988888899999999999999999998888888888888999999999999999999999999998776


Q ss_pred             ccchhhhhhhhhhccCCCCCCCeEEEE
Q 018382          161 LLCAGVTVFSPLSHFGLKQSGLRGGIL  187 (357)
Q Consensus       161 ~~~~~~ta~~~l~~~~~~~~~~~VlI~  187 (357)
                      +.+.+.|||+++.. +.++++++|||.
T Consensus       161 ~~~~~~ta~~~l~~-~~vk~g~~Vvv~  186 (192)
T d1piwa1         161 GEAGVHEAFERMEK-GDVRYRFTLVGY  186 (192)
T ss_dssp             SHHHHHHHHHHHHH-TCCSSEEEEECC
T ss_pred             HHHHHHHHHHHHHH-hCCCCCCEEEEE
Confidence            65557799999975 455999999875

>d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=100.00  E-value=1.1e-35  Score=245.50  Aligned_cols=174  Identities=26%  Similarity=0.410  Sum_probs=157.2

Q ss_pred             hhhhheeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCC-CCCCCCccCccccEEEEEeCCCCC
Q 018382            5 DTERATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLG-MSNYPMVPGHEVVGEVKEVGSEVS   83 (357)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~-~~~~p~~lG~e~~G~V~~vG~~v~   83 (357)
                      ++|++|+|+++.+.++++++++++.|.|+++|||||++++++|++|+++++|.++ ...+|.++|||++|+|+++|++++
T Consensus         1 ~~P~tMkA~v~~~~g~pl~l~evp~P~~~~~evlVkv~a~gic~~D~~~~~G~~~~~~~~P~i~GhE~~G~V~~~G~~v~   80 (175)
T d1llua1           1 TLPQTMKAAVVHAYGAPLRIEEVKVPLPGPGQVLVKIEASGVCHTDLHAAEGDWPVKPPLPFIPGHEGVGYVAAVGSGVT   80 (175)
T ss_dssp             CCCSEEEEEEBCSTTSCCEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHHTCSSSCCCSSBCCCSCEEEEEEEECTTCC
T ss_pred             CcchhcEEEEEEeCCCCCEEEEeECCCCCCCEEEEEEEEecCcccchhhhccCccccccCCcCCCCcceEEEEEeCCCcc
Confidence            3678999999886667799999999999999999999999999999999999876 457899999999999999999999


Q ss_pred             CCCCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccc
Q 018382           84 NFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLC  163 (357)
Q Consensus        84 ~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~  163 (357)
                      +|++||||++.+....|+.|..|..|.++.|+.....       |...+|+|+||+++++++++++|++++++.++++.+
T Consensus        81 ~~~~GdrV~~~~~~~~~g~~~~~~~g~~~~~~~~~~~-------G~~~~gg~aey~~v~~~~~~~iPd~l~~~~a~~~~~  153 (175)
T d1llua1          81 RVKEGDRVGIPWLYTACGCCEHCLTGWETLCESQQNT-------GYSVNGGYAEYVLADPNYVGILPKNVKATIHPGKLD  153 (175)
T ss_dssp             SCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEEB-------TTTBCCSSBSEEEECTTTSEECCTTCCCCEEEECGG
T ss_pred             ccccCCEEEeccccccCCccccccCCccccccccccc-------ccccccccceEEEechHHEEECCCCCChhHHHHHHh
Confidence            9999999998888889999999999999999987655       445789999999999999999999999999998888


Q ss_pred             hhhhhhhhhhccCCCCCCCeEEEE
Q 018382          164 AGVTVFSPLSHFGLKQSGLRGGIL  187 (357)
Q Consensus       164 ~~~ta~~~l~~~~~~~~~~~VlI~  187 (357)
                      ++.|++..++ ++. .+|++|||+
T Consensus       154 ~~~t~~~~~~-~g~-~~G~~VLVl  175 (175)
T d1llua1         154 DINQILDQMR-AGQ-IEGRIVLEM  175 (175)
T ss_dssp             GHHHHHHHHH-TTC-CSSEEEEEC
T ss_pred             HHHHHHHHHH-hCC-CCCCEEEeC
Confidence            9999988775 455 479999985

>d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=100.00  E-value=1.3e-35  Score=249.67  Aligned_cols=182  Identities=23%  Similarity=0.289  Sum_probs=160.0

Q ss_pred             hhhhheeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCC
Q 018382            5 DTERATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSN   84 (357)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~   84 (357)
                      ..+||++|.+..+..++++++|++.|+|+++|||||+.++++|++|++++.|......+|.++|||++|+|+++|+++++
T Consensus         4 ~~~~~~kAav~~~~~~pl~i~ev~~P~p~~~eVlIkv~a~giCgsD~~~~~g~~~~~~~p~i~GhE~~G~v~~vG~~v~~   83 (199)
T d1cdoa1           4 GKVIKCKAAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKDGFPVVLGHEGAGIVESVGPGVTE   83 (199)
T ss_dssp             TSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTTCCTTSCSEECCCCEEEEEEEECTTCCS
T ss_pred             CCceEEEEEEEecCCCCcEEEEEECCCCCCCEEEEEEEEEEEecchhhhhhhcccccccccccccccceEEEEEcCCCce
Confidence            35788889888877778999999999999999999999999999999999998777788999999999999999999999


Q ss_pred             CCCCCEEEEccccCCCCCCcccccCcccccccccccCc-cccCCCC-------------CCCCccceEEEeeCcceEECC
Q 018382           85 FKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYN-DVYTDGK-------------PTQGGFAESMVVDQKFVVKIP  150 (357)
Q Consensus        85 ~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-------------~~~G~~~~~~~v~~~~~~~lP  150 (357)
                      |++||||++. ....|+.|..|..|.++.|++...... +....+.             ...|+|+||++++++.++++|
T Consensus        84 ~~~GdrV~~~-~~~~cg~c~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~Ggfaey~~v~~~~~~~iP  162 (199)
T d1cdoa1          84 FQPGEKVIPL-FISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKID  162 (199)
T ss_dssp             CCTTCEEEEC-SSCCCSSSHHHHCTTCCCCSCSGGGTCTTTTSCSCCCEEETTEEEEEGGGTCCSBSEEEEEGGGEEECC
T ss_pred             ecCCCEEEEe-eeccccccccccCCCcccccccccccccccccCcccceeeccceeecccccCCceEEEEEchHHEEECC
Confidence            9999999655 555699999999999999988754322 2222221             125999999999999999999


Q ss_pred             CCCCccccccccchhhhhhhhhhccCCCCCCCeEEEE
Q 018382          151 DGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGIL  187 (357)
Q Consensus       151 ~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~  187 (357)
                      ++++++++|++.+++.|++.++..++..+.|++|||+
T Consensus       163 ~~~~~~~aa~l~~~l~t~~~av~~~~~~~~G~tVlv~  199 (199)
T d1cdoa1         163 PSVKLDEFITHRMPLESVNDAIDLMKHGKCIRTVLSL  199 (199)
T ss_dssp             TTSCCGGGEEEEEEGGGHHHHHHHHHTTCCSEEEEEC
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCCEEEeC
Confidence            9999999999999999999999998888899999984

>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=100.00  E-value=5.8e-35  Score=241.67  Aligned_cols=170  Identities=22%  Similarity=0.337  Sum_probs=148.7

Q ss_pred             eeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCC---CCCCCCccCccccEEEEEeCCCCCCCC
Q 018382           10 TIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLG---MSNYPMVPGHEVVGEVKEVGSEVSNFK   86 (357)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~---~~~~p~~lG~e~~G~V~~vG~~v~~~~   86 (357)
                      |.|+. + ++++++++++++|+|+++|||||++++++|++|++++++...   ...+|.++|||++|+|+++|+++++|+
T Consensus         3 maAVl-~-g~~~l~~~e~~~P~~~~~evlVkv~a~gic~sD~~~~~~~~~~~~~~~~p~i~GhE~~G~Vv~vG~~v~~~~   80 (178)
T d1e3ja1           3 LSAVL-Y-KQNDLRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNVKHLK   80 (178)
T ss_dssp             EEEEE-E-ETTEEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSBSSSCBCCSCEECCCEEEEEEEEECTTCCSCC
T ss_pred             eEEEE-E-cCCcEEEEEeECCCCCCCEEEEEEEEEcccCchhhhhccCccccccccCCeeeccccceEEEecCcccCCCC
Confidence            34443 4 467799999999999999999999999999999999987543   345688999999999999999999999


Q ss_pred             CCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhh
Q 018382           87 VGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGV  166 (357)
Q Consensus        87 ~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~  166 (357)
                      +||||++.+. ..|+.|..|..|.++.|++..+.+.      ...+|+|+||++++++.++++|++++++++|++++.+.
T Consensus        81 ~GdrV~~~~~-~~~~~c~~c~~g~~~~c~~~~~~~~------~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~~  153 (178)
T d1e3ja1          81 KGDRVAVEPG-VPCRRCQFCKEGKYNLCPDLTFCAT------PPDDGNLARYYVHAADFCHKLPDNCNVKQLVTHSFKLE  153 (178)
T ss_dssp             TTCEEEECCE-ECCSSSHHHHTTCGGGCTTCEETTB------TTBCCSCBSEEEEEGGGEEECCTTCCCGGGEEEEEEGG
T ss_pred             CCCEEEECcc-cccCCccccccCCccccccccceec------cccccccceeeeecccceeeCCCCCCHHHHHHHHhHHH
Confidence            9999976554 4699999999999999988765533      34679999999999999999999999999999999999


Q ss_pred             hhhhhhhccCCCCCCCeEEEEec
Q 018382          167 TVFSPLSHFGLKQSGLRGGILGL  189 (357)
Q Consensus       167 ta~~~l~~~~~~~~~~~VlI~G~  189 (357)
                      |||++++.+.. ++|++|+|+|+
T Consensus       154 ta~~a~~~~~~-~~g~~VlVig~  175 (178)
T d1e3ja1         154 QTVDAFEAARK-KADNTIKVMIS  175 (178)
T ss_dssp             GHHHHHHHHHH-CCTTCSEEEEE
T ss_pred             HHHHHHHHhCC-CCCCEEEEEcc
Confidence            99999976655 99999999975

>d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=100.00  E-value=1.9e-34  Score=241.65  Aligned_cols=180  Identities=20%  Similarity=0.188  Sum_probs=155.8

Q ss_pred             hhheeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCC
Q 018382            7 ERATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFK   86 (357)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~   86 (357)
                      +|||+|++..+.+++++++++|+|+|+++|||||++++++|++|+++++|..+...+|.++|||++|+|+++|+++++++
T Consensus         4 ~~~~kAav~~~~g~~l~i~evp~P~p~~~eVLVkv~a~gic~sD~~~~~G~~~~~~~p~v~GhE~~G~V~~vG~~V~~~~   83 (197)
T d2fzwa1           4 VIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHLGAGIVESVGEGVTKLK   83 (197)
T ss_dssp             CEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTCCTTCCSSBCCCCEEEEEEEEECTTCCSCC
T ss_pred             ceEEEEEEEccCCCCCEEEEEECCCCCCCEEEEEEEEecCCCCcHHHHcCCcccccccccCCcceeeEEEeecCCceecC
Confidence            57899999988888999999999999999999999999999999999999888778999999999999999999999999


Q ss_pred             CCCEEEEccccCCCCCCcccccCccccccccccc-CccccC-------------CCCCCCCccceEEEeeCcceEECCCC
Q 018382           87 VGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWS-YNDVYT-------------DGKPTQGGFAESMVVDQKFVVKIPDG  152 (357)
Q Consensus        87 ~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~-------------~~~~~~G~~~~~~~v~~~~~~~lP~~  152 (357)
                      +||||++.+ ...|+.|..|..|.++.|+..... ..+...             .+...+|+|+||+++++..++++|++
T Consensus        84 ~GdrV~v~~-~~~cg~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~g~GgfAey~vvp~~~~~~vp~~  162 (197)
T d2fzwa1          84 AGDTVIPLY-IPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPL  162 (197)
T ss_dssp             TTCEEEECS-SCCCSCSHHHHCTTCCCCCTTHHHHHTTCCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEECCTT
T ss_pred             CCCEEEEcc-ccccccccccccCccccCccccccccccccCCccceeccCCcceecccccccceeEEEechHHEEECCCC
Confidence            999996654 456999999999999999875322 111111             11223599999999999999999999


Q ss_pred             CCccccccccchhhhhhhhhhccCCCCCCCeEEEE
Q 018382          153 MALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGIL  187 (357)
Q Consensus       153 l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~  187 (357)
                      ++++++|++++++.|++.++..+..-+.+++|||+
T Consensus       163 l~~~~aa~~~~~~~t~~~a~~~~~~g~~~~tvvvi  197 (197)
T d2fzwa1         163 IKVDEFVTHNLSFDEINKAFELMHSGKSIRTVVKI  197 (197)
T ss_dssp             SCSGGGEEEEEEGGGHHHHHHHHHHTCCSEEEEEC
T ss_pred             CCHHHHhhhhhHHHHHHHHHHhccCCCcCCEEEeC
Confidence            99999999999999999998766655788899874

>d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=100.00  E-value=7.7e-34  Score=237.11  Aligned_cols=174  Identities=21%  Similarity=0.396  Sum_probs=145.8

Q ss_pred             hheeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCC
Q 018382            8 RATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKV   87 (357)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~   87 (357)
                      ++|+|.+....+++|++++++.|+|+++|||||+.++++|++|++++.|.++ .++|.++|||++|+|+++|+++++|++
T Consensus         2 k~~~Aav~~~~g~~l~l~~v~~P~p~~geVlVkv~a~gic~sD~~~~~G~~~-~~~P~i~GHE~~G~V~~vG~~v~~~~v   80 (194)
T d1f8fa1           2 KDIIAAVTPCKGADFELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYP-VPLPAVLGHEGSGIIEAIGPNVTELQV   80 (194)
T ss_dssp             EEEEEEEBCSTTCCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSC-CCSSBCCCCEEEEEEEEECTTCCSCCT
T ss_pred             ceeEEEEEcCCCCCcEEEEeeCCCCCCCEEEEEEEEEEecCchHhhhhhccc-ccCCcccccceEEEeeecCccceeEcc
Confidence            4567777777788999999999999999999999999999999999999876 468999999999999999999999999


Q ss_pred             CCEEEEccccCCCCCCcccccCccccccccc-ccCccccCCCC---------------CCCCccceEEEeeCcceEECCC
Q 018382           88 GDKVGVGVLVGCCRNCRPCEADVEQYCNKKI-WSYNDVYTDGK---------------PTQGGFAESMVVDQKFVVKIPD  151 (357)
Q Consensus        88 Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---------------~~~G~~~~~~~v~~~~~~~lP~  151 (357)
                      |||| +.++. .||.|.+|+.|.++.|++.. ..+.+...+|.               ...|+|+||.+++...++++|+
T Consensus        81 GDrV-v~~~~-~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~dg~~~~~~~~~~~~~~~~~~~g~fae~~~v~~~~~~~ip~  158 (194)
T d1f8fa1          81 GDHV-VLSYG-YCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTK  158 (194)
T ss_dssp             TCEE-EECCC-CCSSSHHHHTTCGGGCTTHHHHSSSSSCSSSCCSBC------CBCCGGGTCCSBSEEEEEGGGEEEECT
T ss_pred             Ccee-eeecc-cccCChhhhCCCcccccccccceeccccccceeeeecCCceeeccccccccccceeEEEehHHEEECCC
Confidence            9999 44554 59999999999999999763 22333222221               1248999999999999999999


Q ss_pred             CCCccccccccchhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCeEEE
Q 018382          152 GMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTV  209 (357)
Q Consensus       152 ~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~  209 (357)
                      +++++++                         ++|.|+|++|++++|+++.+|++.++
T Consensus       159 ~i~~~~~-------------------------~~i~g~g~~g~~aiq~a~~~g~~~ii  191 (194)
T d1f8fa1         159 DFPFDQL-------------------------VKFYAFDEINQAAIDSRKGITLKPII  191 (194)
T ss_dssp             TCCGGGG-------------------------EEEEEGGGHHHHHHHHHHTSCSEEEE
T ss_pred             CCCcccE-------------------------EEEeCcHHHHHHHHHHHHHcCCCEEE
Confidence            9887653                         34567899999999999999995444

>d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=100.00  E-value=1.2e-33  Score=231.75  Aligned_cols=166  Identities=26%  Similarity=0.351  Sum_probs=146.2

Q ss_pred             eeehccCCCCCcceeeeecCCC-CCCcEEEEEeeeccccchHHHHhcCCC---CCCCCCccCccccEEEEEeCCCCCCCC
Q 018382           11 IGWAAKDPSGILSPYTYTLRNT-GAEDVYIKVLYCGICHTDIHQIKNDLG---MSNYPMVPGHEVVGEVKEVGSEVSNFK   86 (357)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~p~~-~~~evlV~v~~~~~~~~D~~~~~g~~~---~~~~p~~lG~e~~G~V~~vG~~v~~~~   86 (357)
                      +|+.+...++++++++++.|++ .++|||||+.++++|++|+++++|..+   ..++|.++|||++|+|+++|+++++|+
T Consensus         1 kA~~~~~~g~pl~i~~v~~P~~~~~~eVlVkv~a~gic~sD~~~~~g~~~~~~~~~~P~v~GhE~~G~V~~vG~~v~~~~   80 (171)
T d1h2ba1           1 KAARLHEYNKPLRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEEVAEGVEGLE   80 (171)
T ss_dssp             CEEEESSTTSCCEEECCCCCCCBTTBCEEEEEEEEECCHHHHHHHHTTTHHHHCCCSSEECCCCEEEEEEEECTTCCSCC
T ss_pred             CEEEEEeCCCCCEEEEeeCCCCCCCCEEEEEEEecccceeeehccCCCcccccCCccccccceeeeeeeecccCCCCcCC
Confidence            3555555566799999999986 689999999999999999999998765   457899999999999999999999999


Q ss_pred             CCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhh
Q 018382           87 VGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGV  166 (357)
Q Consensus        87 ~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~  166 (357)
                      +||||++.+. ..||.|..|..|.++.|++..+.       |...+|+|+||+.++++.++++|++++++.++++.+.+.
T Consensus        81 ~GdrV~~~~~-~~cg~~~~c~~g~~~~c~~~~~~-------g~~~~G~~aey~~v~~~~~~~iP~~~~~e~aa~~~~~~~  152 (171)
T d1h2ba1          81 KGDPVILHPA-VTDGTCLACRAGEDMHCENLEFP-------GLNIDGGFAEFMRTSHRSVIKLPKDVRVEVDIHKLDEIN  152 (171)
T ss_dssp             TTCEEEECSC-BCCSCSHHHHTTCGGGCTTCBCB-------TTTBCCSSBSEEEECGGGEEECCTTCCCCEEEEEGGGHH
T ss_pred             CCCEEEEcCc-cCCCCcccccccccccccccccc-------eeecccccceeeeehhhcceecCCCCCHHHHHHHHhHHH
Confidence            9999977655 46999999999999999987665       345789999999999999999999999999999999999


Q ss_pred             hhhhhhhccCCCCCCCeEEE
Q 018382          167 TVFSPLSHFGLKQSGLRGGI  186 (357)
Q Consensus       167 ta~~~l~~~~~~~~~~~VlI  186 (357)
                      |||++++. ..+ .|++|||
T Consensus       153 ta~~al~~-~~~-~G~~VlI  170 (171)
T d1h2ba1         153 DVLERLEK-GEV-LGRAVLI  170 (171)
T ss_dssp             HHHHHHHT-TCC-SSEEEEE
T ss_pred             HHHHHHHh-cCC-CCCEEEe
Confidence            99999976 454 7999998

>d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=100.00  E-value=1.4e-33  Score=238.09  Aligned_cols=180  Identities=21%  Similarity=0.239  Sum_probs=153.0

Q ss_pred             chhhhheeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCC
Q 018382            4 LDTERATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVS   83 (357)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~   83 (357)
                      +..+|||+|++..+.+++++++++|+|+|+++|||||+.++++|++|+++++|..+ ..+|.++|||++|+|+++|++++
T Consensus         3 ~~~~~~~KAaV~~~~g~pl~i~evp~P~p~~geVlVkv~a~gic~sD~~~~~G~~~-~~~P~v~GHE~~G~V~~vG~~V~   81 (202)
T d1e3ia1           3 QGKVIKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPKKK-ALFPVVLGHECAGIVESVGPGVT   81 (202)
T ss_dssp             TTSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHTTCTTSC-CCSSBCCCCEEEEEEEEECTTCC
T ss_pred             CCCeEEEEEEEEccCCCCCEEEEEECCCCCCCEEEEEEEEEEEeccccceeeeecc-cccccccccccceEEeeecCCce
Confidence            45689999999987777899999999999999999999999999999999999876 46799999999999999999999


Q ss_pred             CCCCCCEEEEccccCCCCCCcccccCcccccccccccCcccc------------------CCCCCCCCccceEEEeeCcc
Q 018382           84 NFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVY------------------TDGKPTQGGFAESMVVDQKF  145 (357)
Q Consensus        84 ~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~G~~~~~~~v~~~~  145 (357)
                      +|++||||++. ....|+.|..|..|.++.|.+.........                  ..+....|+|+||+++++..
T Consensus        82 ~~~~GdrV~~~-~~~~c~~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~G~faey~~v~~~~  160 (202)
T d1e3ia1          82 NFKPGDKVIPF-FAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEAN  160 (202)
T ss_dssp             SCCTTCEEEEC-SSCCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGG
T ss_pred             eccCCCEEEEE-eeccccccccccCCcccccccccccccCccceecccccccccccCceeeecccccCCceEEEEEehhh
Confidence            99999999655 456799999999999999987653321110                  01112359999999999999


Q ss_pred             eEECCCCCCccccccccchhhhhhhhhhccCCCCCCCeEEEEe
Q 018382          146 VVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILG  188 (357)
Q Consensus       146 ~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G  188 (357)
                      ++++|++++++.++++.+++.+++.++..   +++|++|.|+.
T Consensus       161 l~~lP~~~~~~~~~~~~~~~~~~~~a~~~---~k~G~~V~vi~  200 (202)
T d1e3ia1         161 LARVDDEFDLDLLVTHALPFESINDAIDL---MKEGKSIRTIL  200 (202)
T ss_dssp             EEECCTTSCGGGGEEEEEEGGGHHHHHHH---HHTTCCSEEEE
T ss_pred             EEECCCCCCHHHHHHHHHHHHHHHHHHHh---CCCCCEEEEEE
Confidence            99999999999999999998888888753   36899988763

>d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=2.8e-33  Score=230.96  Aligned_cols=173  Identities=17%  Similarity=0.261  Sum_probs=144.7

Q ss_pred             hhheeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCC---
Q 018382            7 ERATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVS---   83 (357)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~---   83 (357)
                      +++++|+++.+.+++++++++++|+|+++|||||+.++|||++|+++++|..+..++|+++|||++|+|+++|++++   
T Consensus         2 ~~k~kA~v~~~~~~pl~i~ev~~P~~~~~evlVkv~a~gIC~sD~~~~~G~~~~~~~P~vlGHE~~G~V~~vG~~v~~~~   81 (184)
T d1vj0a1           2 GLKAHAMVLEKFNQPLVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPRVPLPIILGHEGAGRVVEVNGEKRDLN   81 (184)
T ss_dssp             CEEEEEEEBCSTTSCCEEEEEEECCCCTTCEEEEEEEEEECHHHHHHHTTCCTTCCSSBCCCCEEEEEEEEESSCCBCTT
T ss_pred             CceEEEEEEecCCCCcEEEEeeCCCCCCCEEEEEEEEECCCCCchhheeccCCccccccccceeeeeeeeEEeccccccc
Confidence            68889999887777899999999999999999999999999999999999988778999999999999999999986   


Q ss_pred             --CCCCCCEEEEccccCCCCCCcccccCc-ccccccccccC-ccccCCCCCCCCccceEEEee-CcceEECCCCCCcccc
Q 018382           84 --NFKVGDKVGVGVLVGCCRNCRPCEADV-EQYCNKKIWSY-NDVYTDGKPTQGGFAESMVVD-QKFVVKIPDGMALEQA  158 (357)
Q Consensus        84 --~~~~Gd~V~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~G~~~~~~~v~-~~~~~~lP~~l~~~~a  158 (357)
                        ++++||+|++.+ ..+||.|..|+.|. ++.|++....+ .+.+......+|+|+||++++ +.+++++|++++++++
T Consensus        82 ~~~~~~Gd~V~~~~-~~~Cg~C~~C~~g~~~~~c~~~~~~G~~~~~~~~~~~~Gg~ae~~~v~~~~~v~~ip~~l~~~~p  160 (184)
T d1vj0a1          82 GELLKPGDLIVWNR-GITCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPHLRGCYSSHIVLDPETDVLKVSEKITHRLP  160 (184)
T ss_dssp             SCBCCTTCEEEECS-EECCSSSHHHHTSCCGGGCTTCEETTTTCCSSSTTCCCSSSBSEEEECTTCCEEEECTTCCEEEE
T ss_pred             cccccceeeeEecc-ccccccChhHhCccccccCCCceeeccCCCCCCCCCcceeCcCcEEechhHcEEECCCCCCHHHH
Confidence              467999996655 44699999999988 45677765443 222333345799999999996 5799999999997642


Q ss_pred             ccccchhhhhhhhhhccCCCCCCCeEEEE
Q 018382          159 APLLCAGVTVFSPLSHFGLKQSGLRGGIL  187 (357)
Q Consensus       159 a~~~~~~~ta~~~l~~~~~~~~~~~VlI~  187 (357)
                            +.+|+.++..+.. ++|++|||+
T Consensus       161 ------l~~A~~a~~~~~~-~~G~~VlI~  182 (184)
T d1vj0a1         161 ------LKEANKALELMES-REALKVILY  182 (184)
T ss_dssp             ------GGGHHHHHHHHHH-TSCSCEEEE
T ss_pred             ------HHHHHHHHHHhCC-CcCCEEEEe
Confidence                  4567778876665 999999997

>d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=100.00  E-value=1.4e-32  Score=225.91  Aligned_cols=169  Identities=31%  Similarity=0.496  Sum_probs=144.9

Q ss_pred             eeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCC-CCCCCCCccCccccEEEEEeCCCCCCCCCC
Q 018382           10 TIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDL-GMSNYPMVPGHEVVGEVKEVGSEVSNFKVG   88 (357)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~-~~~~~p~~lG~e~~G~V~~vG~~v~~~~~G   88 (357)
                      |+|+++.+.++++++++++.|+|+++|||||++++++|++|++++++.. ....+|.++|||++|+|+++|++++++++|
T Consensus         1 MkA~v~~~~g~pl~i~~v~~P~~~~~eVlVkv~a~gic~sD~~~~~~~~~~~~~~p~v~GhE~~G~Vv~vG~~v~~~~vG   80 (171)
T d1rjwa1           1 MKAAVVEQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGIVEEVGPGVTHLKVG   80 (171)
T ss_dssp             CEEEEBSSTTSCCEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSCEEEEEEEECTTCCSCCTT
T ss_pred             CeEEEEecCCCCcEEEEeECCCCCCCeEEEEEEEeeccccceeeeecccccccccccccCCEEEEEEEEecccccCceee
Confidence            5777777656779999999999999999999999999999999888653 356789999999999999999999999999


Q ss_pred             CEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhhh
Q 018382           89 DKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTV  168 (357)
Q Consensus        89 d~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta  168 (357)
                      |||++.+...+|+.|..|..+.++.|......       |...+|+|+||+++++++++++|++++++.|+ +.+ ..++
T Consensus        81 drV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------g~~~~G~~aey~~v~~~~~~~iP~~~~~e~A~-l~~-~~~~  151 (171)
T d1rjwa1          81 DRVGIPWLYSACGHCDYCLSGQETLCEHQKNA-------GYSVDGGYAEYCRAAADYVVKIPDNTIIEVQP-LEK-INEV  151 (171)
T ss_dssp             CEEEECSEEECCSCSHHHHTTCGGGCTTCEEB-------TTTBCCSSBSEEEEEGGGCEECCTTCCEEEEE-GGG-HHHH
T ss_pred             eEEeeccccccccccccccCCCcccccccccc-------ceeccCccccceEecHHHEEECCCCCCHHHHH-HHH-HHHH
Confidence            99999888899999999999999999887655       34568999999999999999999999987665 443 4566


Q ss_pred             hhhhhccCCCCCCCeEEEEec
Q 018382          169 FSPLSHFGLKQSGLRGGILGL  189 (357)
Q Consensus       169 ~~~l~~~~~~~~~~~VlI~G~  189 (357)
                      ++.+.+ +. -+|++|||+|.
T Consensus       152 ~~~~~~-~~-~~G~tVlViG~  170 (171)
T d1rjwa1         152 FDRMLK-GQ-INGRVVLTLED  170 (171)
T ss_dssp             HHHHHT-TC-CSSEEEEECCC
T ss_pred             HHHHHh-cC-CCCCEEEEeCC
Confidence            666654 34 25999999984

>d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=7.4e-33  Score=230.07  Aligned_cols=171  Identities=22%  Similarity=0.328  Sum_probs=144.3

Q ss_pred             heeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCC---CCCCCCccCccccEEEEEeCCCCCCC
Q 018382            9 ATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLG---MSNYPMVPGHEVVGEVKEVGSEVSNF   85 (357)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~---~~~~p~~lG~e~~G~V~~vG~~v~~~   85 (357)
                      .+.++++. +++.++++++++|+|+++|||||+.++++|++|++++++...   ...+|.++|||++|+|+++|+++++|
T Consensus         7 ~~~a~V~~-gp~~l~l~evp~P~p~~~eVlVkv~a~gic~sD~~~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~   85 (185)
T d1pl8a1           7 NNLSLVVH-GPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSVKHL   85 (185)
T ss_dssp             CCEEEEEE-ETTEEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSEETTEECSSCEECCCEEEEEEEEECTTCCSC
T ss_pred             CCEEEEEe-CCCeEEEEEeECCCCCCCEEEEEEEEEEeeCchhhhhccccccccCCCCCeeeeeeeeeeEEEeccceeee
Confidence            55677776 567899999999999999999999999999999999986432   34678899999999999999999999


Q ss_pred             CCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchh
Q 018382           86 KVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAG  165 (357)
Q Consensus        86 ~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~  165 (357)
                      ++||||++.+.. .||.|..|..|.++.|+...+.+.      ...+|+|+||+++++++++++|+++++++|++++  +
T Consensus        86 ~~GdrV~~~~~~-~cg~c~~c~~G~~~~c~~~~~~g~------~~~~G~~aey~~~~~~~~~~lP~~~~~~~aa~~p--l  156 (185)
T d1pl8a1          86 KPGDRVAIEPGA-PRENDEFCKMGRYNLSPSIFFCAT------PPDDGNLCRFYKHNAAFCYKLPDNVKPLVTHRFP--L  156 (185)
T ss_dssp             CTTCEEEECSEE-CSSCCHHHHTTCGGGCTTCEETTB------TTBCCSCBSEEEEEGGGEEECCTTCGGGEEEEEE--G
T ss_pred             cccccceeccee-ccccchhhccchhchhccceeeec------ccccccceEEEEEchHHEEECCCCCCHHHHHHHH--H
Confidence            999999776554 699999999999999988765533      2468999999999999999999999999988765  3


Q ss_pred             hhhhhhhhccCCCCCCCeEEEEecCh
Q 018382          166 VTVFSPLSHFGLKQSGLRGGILGLGG  191 (357)
Q Consensus       166 ~ta~~~l~~~~~~~~~~~VlI~G~g~  191 (357)
                      .+|++++..+.. ++|++||| |+|+
T Consensus       157 ~~a~~a~~~~~~-~~G~~VlI-g~GP  180 (185)
T d1pl8a1         157 EKALEAFETFKK-GLGLKIML-KCDP  180 (185)
T ss_dssp             GGHHHHHHHHHT-TCCSEEEE-ECCT
T ss_pred             HHHHHHHHHhCC-CCCCEEEE-EeCC
Confidence            456666665555 89999998 6554

>d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=99.98  E-value=2e-32  Score=225.40  Aligned_cols=164  Identities=33%  Similarity=0.640  Sum_probs=137.9

Q ss_pred             eeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCCCC
Q 018382           10 TIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGD   89 (357)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd   89 (357)
                      |+|+..++.+++|++++++.|+|++||||||+.+++||++|++++.|..+...+|+++|||++|+|+++|++|++|++||
T Consensus         1 m~a~~~~~~~~pl~i~ev~~P~pg~geVlVkv~a~gic~sDl~~~~g~~~~~~~P~i~GhE~~G~V~~vG~~V~~~~vGd   80 (179)
T d1uufa1           1 IKAVGAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVPGHEIVGRVVAVGDQVEKYAPGD   80 (179)
T ss_dssp             CEEEEBSSTTSCCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHCTTSCCCSSBCCCCCEEEEEEEECTTCCSCCTTC
T ss_pred             CeEEEEccCCCCCEEEEecCCCCCCCEEEEEEEEECCCCCcceeeeeeeccccccccccccccccchhhccccccCCCCC
Confidence            57888888888999999999999999999999999999999999999888788999999999999999999999999999


Q ss_pred             EEEEccccCCCCCCcccccCcccccccccccCccccCCC-CCCCCccceEEEeeCcceEECCCCCCccccccccchhhhh
Q 018382           90 KVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDG-KPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTV  168 (357)
Q Consensus        90 ~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta  168 (357)
                      ||.+.+..+.||.|..|+.|.++.|++....+.+...+. ...+|+|+||+++++++++++|+......   +...+.++
T Consensus        81 rV~v~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~GgfaEy~~v~~~~~~~ip~~~~~~~---~a~~l~~a  157 (179)
T d1uufa1          81 LVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRVADIEMI---RADQINEA  157 (179)
T ss_dssp             EEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCSSTTSBCCCSSBSEEEEEGGGCEECCCCCEEEE---CGGGHHHH
T ss_pred             EEEEcccccccCccccccCcccccCCCccccccccCCCCCcccccccceEEEechHHEEECCCCCcChh---HhchhHHH
Confidence            999888888999999999999999998765544443222 23579999999999999999996543222   22344566


Q ss_pred             hhhhhccC
Q 018382          169 FSPLSHFG  176 (357)
Q Consensus       169 ~~~l~~~~  176 (357)
                      ++++..+.
T Consensus       158 ~~a~~~a~  165 (179)
T d1uufa1         158 YERMLRGD  165 (179)
T ss_dssp             HHHHHTTC
T ss_pred             HHHHHHhC
Confidence            66665443

>d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=99.97  E-value=1.7e-34  Score=242.07  Aligned_cols=188  Identities=23%  Similarity=0.277  Sum_probs=154.2

Q ss_pred             eeeehccCCCCCcceeeeecCCC-------CCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCC
Q 018382           10 TIGWAAKDPSGILSPYTYTLRNT-------GAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEV   82 (357)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~p~~-------~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v   82 (357)
                      ++|+++. +++.++++|++.|++       .++|||||+.++++|++|+++++|..+ ..+|+++|||++|+|+++|++|
T Consensus         2 ~kA~v~~-~~~~le~~e~~~P~~~~p~~~p~~~eVlVkv~a~giC~sDl~~~~G~~~-~~~P~v~GHE~~G~Vv~vG~~V   79 (201)
T d1kola1           2 NRGVVYL-GSGKVEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTT-AQVGLVLGHEITGEVIEKGRDV   79 (201)
T ss_dssp             EEEEEEE-ETTEEEEEEECCCCSBCTTSCBCSSCEEEEEEEEECCHHHHHHHTTCSC-CCTTCBCCCCEEEEEEEECTTC
T ss_pred             cEEEEEe-CCCceEEEEecCCcccCCCCCCCCCEEEEEEEEEEEcchhhhhhcCCcc-cccceeccceeeeeeecccccc
Confidence            4677776 456799999999865       569999999999999999999999876 4689999999999999999999


Q ss_pred             CCCCCCCEEEEccccCCCCCCcccccCccccccccccc-Cccc--cCCCCCCCCccceEEEeeC--cceEECCCCCCccc
Q 018382           83 SNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWS-YNDV--YTDGKPTQGGFAESMVVDQ--KFVVKIPDGMALEQ  157 (357)
Q Consensus        83 ~~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~G~~~~~~~v~~--~~~~~lP~~l~~~~  157 (357)
                      ++|++||||++.+ ..+||+|..|++|+++.|...... ..+.  +..+...+|+|+||+++|.  ..++++|++.+..+
T Consensus        80 ~~~~vGdrV~v~~-~~~Cg~C~~C~~g~~~~~~~~~~~~~~~~~g~~~~~~~~Gg~aeyv~vp~~~~~l~~iPd~~~~~~  158 (201)
T d1kola1          80 ENLQIGDLVSVPF-NVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTGGQAEYVLVPYADFNLLKLPDRDKAME  158 (201)
T ss_dssp             CSCCTTCEEECCS-EECCSSSHHHHTTCGGGCSSSCSSSSCEEBTCTTSCCBCCCSBSEEEESSHHHHCEECSCHHHHHH
T ss_pred             ccccccceeEEee-eeeccCChhhhCCCcccccccccccccccccccCCCccccccccEEEeehHHCeEEECCCCCChHH
Confidence            9999999997655 567999999999999999765422 1111  2233456899999999985  37999999888778


Q ss_pred             cccccchhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC
Q 018382          158 AAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH  205 (357)
Q Consensus       158 aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~  205 (357)
                      ++++...+.+++.++..... +.+    ++|+|++|++++|+||.+|+
T Consensus       159 ~~~~~~~~~~~~~a~~~~~~-~~g----~~g~G~vG~~~i~~ak~~GA  201 (201)
T d1kola1         159 KINIAEVVGVQVISLDDAPR-GYG----EFDAGVPKKFVIDPHKTFSA  201 (201)
T ss_dssp             TCCHHHHHTEEEECGGGHHH-HHH----HHHHTCSCEEEECTTCSSCC
T ss_pred             HHHHHHHHHHHHHHHHhCCC-CCe----EEeeCHHHHHHHHHHHHcCC
Confidence            88888888888888766543 333    35889999999999999886

>d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=99.97  E-value=6.3e-34  Score=233.80  Aligned_cols=171  Identities=23%  Similarity=0.234  Sum_probs=138.2

Q ss_pred             eeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCCCC
Q 018382           10 TIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGD   89 (357)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd   89 (357)
                      |+++++. ++++++++|+|.|.|+++|||||++++++|++|++++.+.....++|+++|||++|+|+++|+++++|++||
T Consensus         1 MKa~v~~-~~~~l~i~e~p~P~~~~~eVlIkv~a~gic~sD~~~~~~~~~~~~~P~i~GhE~~G~V~~vG~~v~~~~vGd   79 (177)
T d1jqba1           1 MKGFAML-GINKLGWIEKERPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGDRKNMILGHEAVGEVVEVGSEVKDFKPGD   79 (177)
T ss_dssp             CEEEEEE-ETTEEEEEECCCCCCCTTCEEEEEEEECCCHHHHHHHHHCTTCCCSSEECCCCEEEEEEEECTTCCSCCTTC
T ss_pred             CeEEEEE-eCCCeEEEEeeCCCCCCCEEEEEEEEEecCCCcccccccCCCCCCCCccCcceeeEEeeecccccceecCCC
Confidence            5677776 467799999999999999999999999999999998877666667899999999999999999999999999


Q ss_pred             EEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeC--cceEECCCCCCccccccccchhhh
Q 018382           90 KVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQ--KFVVKIPDGMALEQAAPLLCAGVT  167 (357)
Q Consensus        90 ~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~--~~~~~lP~~l~~~~aa~~~~~~~t  167 (357)
                      ||++. ...+||.|..|..+.++.|.......    ..+...+|+|+||++++.  ..++++|+++++++++...+.   
T Consensus        80 rV~v~-~~~~cg~c~~C~~g~~~~c~~~~~~~----~~g~~~~G~~aEy~~vp~a~~~l~~iP~~~~~~~~~~~~~~---  151 (177)
T d1jqba1          80 RVIVP-CTTPDWRSLEVQAGFQQHSNGMLAGW----KFSNFKDGVFGEYFHVNDADMNLAILPKDVDLSKLVTHVYH---  151 (177)
T ss_dssp             EEEEC-SCCCCSSSHHHHTTCGGGTTSTTTTC----CBTTTBCCSSBSSEEESSHHHHCEECCTTSCGGGGEEEEEE---
T ss_pred             cEEEe-eeeccccccchhhhhhcccccccccc----cccCCCChhcCeeEEEEhhhCeEEECCCCcchHHHHHHHHH---
Confidence            99765 44579999999999999998764321    113457899999999986  478999999999887644332   


Q ss_pred             hhhhhhccCCCCCCCeEEEEecChHHHHHH
Q 018382          168 VFSPLSHFGLKQSGLRGGILGLGGVGHMGV  197 (357)
Q Consensus       168 a~~~l~~~~~~~~~~~VlI~G~g~~G~~ai  197 (357)
                      ++..+        ++.|+|+|+|++|+.++
T Consensus       152 ~~~~~--------~~~vlv~g~gp~gl~aa  173 (177)
T d1jqba1         152 GFDHI--------EEALLLMKDKPKDLIKA  173 (177)
T ss_dssp             SGGGH--------HHHHHHHHHCCTTCSEE
T ss_pred             HHHHh--------cCceEEECCCHHHhhee
Confidence            22222        34578888888876543

>d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=99.97  E-value=5.8e-32  Score=226.55  Aligned_cols=177  Identities=27%  Similarity=0.334  Sum_probs=144.8

Q ss_pred             hhhheeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCC
Q 018382            6 TERATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNF   85 (357)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~   85 (357)
                      ...||+|.+..++++++++++++.|+|+++|||||+.++++|++|+++++|.++. ++|.++|||++|+|+++|+++++|
T Consensus         5 ~~~~~KAav~~~~g~~l~i~ev~~P~p~~~eVlVkv~a~gICgsDlh~~~G~~~~-~~P~i~GHE~~G~Vv~~G~~v~~~   83 (198)
T d1p0fa1           5 KDITCKAAVAWEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIPS-KFPVILGHEAVGVVESIGAGVTCV   83 (198)
T ss_dssp             SCEEEEEEEBSSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSCC-CSSBCCCCCEEEEEEEECTTCCSC
T ss_pred             CceEEEEEEEccCCCCCEEEEEECCCCCCCEEEEEEEEEEEecccceeeeecccc-ccccccceeeeeeeeecCcccccC
Confidence            3568999998877788999999999999999999999999999999999998764 689999999999999999999999


Q ss_pred             CCCCEEEEccccCCCCCCcccccCcccccccccccCcc-ccCCC-------------CCCCCccceEEEeeCcceEECCC
Q 018382           86 KVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYND-VYTDG-------------KPTQGGFAESMVVDQKFVVKIPD  151 (357)
Q Consensus        86 ~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~-------------~~~~G~~~~~~~v~~~~~~~lP~  151 (357)
                      ++||||++. +...|+.|.+|..|.++.|+........ ....+             ....|+|+||+.+++..++++|+
T Consensus        84 ~~GdrV~~~-~~~~Cg~c~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~faey~~v~~~~~~kip~  162 (198)
T d1p0fa1          84 KPGDKVIPL-FVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKIDP  162 (198)
T ss_dssp             CTTCEEEEC-SSCCCSSSHHHHCTTCCCCTTCSTTTCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEETTSEEEECT
T ss_pred             cCCCEEEEE-eeccccccccccccccccchhhhccccccccCCCceeEeeCCeeccccCCCccceeeEEecHHHEEECCC
Confidence            999999665 4557999999999999999876533211 11110             12358999999999999999999


Q ss_pred             CCCccccccccchhhhhhhhhhccCCCCCCCeEEEEecChHHH
Q 018382          152 GMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGH  194 (357)
Q Consensus       152 ~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~  194 (357)
                      +++++.++...+...+          +.+++.|||.|+|++|+
T Consensus       163 ~~~~~~~~~~~~~~~~----------v~~~~~vlv~G~G~iGl  195 (198)
T d1p0fa1         163 KINVNFLVSTKLTLDQ----------INKAFELLSSGQGVRSI  195 (198)
T ss_dssp             TSCGGGGEEEEECGGG----------HHHHHHHTTTSSCSEEE
T ss_pred             CCCHHHHHHhhcchhh----------cCCCCEEEEECCCcceE
Confidence            9998876654443222          24556688889888775

>d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=99.97  E-value=4.9e-31  Score=221.47  Aligned_cols=180  Identities=24%  Similarity=0.292  Sum_probs=146.8

Q ss_pred             chhhhheeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCC
Q 018382            4 LDTERATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVS   83 (357)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~   83 (357)
                      +-..+||+|+++.+.++++++++++.|+|+++||||||.++|+|++|+++++|.++. .+|.++|||++|+|+++|++++
T Consensus         3 ~~~~~k~KAavl~~~~~~l~i~ev~~P~p~~~eVlVkV~a~giC~sDl~~~~G~~~~-~~P~i~GHE~~G~Vv~vG~~v~   81 (198)
T d2jhfa1           3 AGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVT-PLPVIAGHEAAGIVESIGEGVT   81 (198)
T ss_dssp             TTSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTSSCC-CSSBCCCCSEEEEEEEECTTCC
T ss_pred             CCCceEEEEEEEecCCCCCEEEEEECCCCCCCEEEEEEEEEecccccceeecCCccc-ccceecccceeEEEEecCcccc
Confidence            456899999998878888999999999999999999999999999999999998774 6899999999999999999999


Q ss_pred             CCCCCCEEEEccccCCCCCCcccccCcccccccccccCccccCC---------C-----CCCCCccceEEEeeCcceEEC
Q 018382           84 NFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTD---------G-----KPTQGGFAESMVVDQKFVVKI  149 (357)
Q Consensus        84 ~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---------~-----~~~~G~~~~~~~v~~~~~~~l  149 (357)
                      ++++||||++. ....|+.|..|..+.++.|.............         |     ....|+|+||+++++..++++
T Consensus        82 ~~~vGdrV~v~-~~~~c~~c~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~fAEy~~v~~~~~~~~  160 (198)
T d2jhfa1          82 TVRPGDKVIPL-FTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKI  160 (198)
T ss_dssp             SCCTTCEEEEC-SSCCCSCSHHHHSTTCCCCTTCSSSSCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEEGGGEEEC
T ss_pred             CcCCCCEEEEe-eeecccccccccCCccceeccccccccCccccCccccccccCceeccCCCCCcccCeEEeCHHHeEEC
Confidence            99999999655 45579999999999999999876543221111         1     123599999999999999999


Q ss_pred             CCCCCccccccccchhhhhhhhhhccCCCCCCCeEEEEe
Q 018382          150 PDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILG  188 (357)
Q Consensus       150 P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G  188 (357)
                      |++++++.+++..+++.+...+.   ..+++|++|+|+.
T Consensus       161 p~~~~~e~l~~~~~~~~~v~~g~---~~l~~G~~VaVi~  196 (198)
T d2jhfa1         161 DAAFALDPLITHVLPFEKINEGF---DLLRSGESIRTIL  196 (198)
T ss_dssp             CTTSCCGGGEEEEEEGGGHHHHH---HHHHTTCCSEEEE
T ss_pred             CCCCCHHHHHHHHHHHHhhhhCC---ceeeCCCEEEEEE
Confidence            99999887776555443332221   2347899988863

>d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=99.97  E-value=5.5e-31  Score=217.49  Aligned_cols=167  Identities=26%  Similarity=0.382  Sum_probs=138.1

Q ss_pred             eeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCC--------CCCCCCccCccccEEEEEeCCC
Q 018382           10 TIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLG--------MSNYPMVPGHEVVGEVKEVGSE   81 (357)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~--------~~~~p~~lG~e~~G~V~~vG~~   81 (357)
                      |+|+++...++++++++++.|+|+++|||||+.++++|++|+++++|.++        ..++|.++|||++|+|+++|++
T Consensus         1 MKA~~~~~~G~pl~i~dv~~P~p~~~eVlVkv~a~gic~~D~~~~~G~~~~~~~~~~~~~~~P~v~GhE~~G~V~~~g~~   80 (177)
T d1jvba1           1 MRAVRLVEIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDE   80 (177)
T ss_dssp             CEEEEECSTTSCCEEEECCCCCCCTTCEEEEEEEEEECTHHHHHTTTEETTEETTTTTCCCSCEECCCEEEEEEEEECTT
T ss_pred             CeEEEEEeCCCCCEEEEeeCCCCCCCEEEEEEEEEecccceeeeecCcccccccccccccCCCccccceEEEEEeeeccC
Confidence            56777765556799999999999999999999999999999999998653        3468999999999999999999


Q ss_pred             CCCCCCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcc-eEECCCCCCcccccc
Q 018382           82 VSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKF-VVKIPDGMALEQAAP  160 (357)
Q Consensus        82 v~~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~-~~~lP~~l~~~~aa~  160 (357)
                      +++|++||||++.+.. .|+.|..|..+.++.|+...+.       |...+|+|+||++++... ++++|+..+.+.|+.
T Consensus        81 v~~~~~GdrV~~~~~~-~c~~c~~~~~g~~~~c~~~~~~-------g~~~~G~~aey~~vp~~~~~~~~~~~~~~~~a~~  152 (177)
T d1jvba1          81 VVGYSKGDLVAVNPWQ-GEGNCYYCRIGEEHLCDSPRWL-------GINFDGAYAEYVIVPHYKYMYKLRRVKPMITKTM  152 (177)
T ss_dssp             CCSCCTTCEEEECCEE-CCSSSHHHHTTCGGGCSSCEEB-------TTTBCCSSBSEEEESCGGGEEECSSSCCCCEEEE
T ss_pred             ccccccCceEeeeecc-ccccccccccccccccCCccee-------eeccccccccEEEEEhHHeEEECCCCChHHHHHH
Confidence            9999999999776554 5999999999999999987654       345789999999997655 556665555544444


Q ss_pred             ccchhhhhhhhhhccCCCCCCCeEEE
Q 018382          161 LLCAGVTVFSPLSHFGLKQSGLRGGI  186 (357)
Q Consensus       161 ~~~~~~ta~~~l~~~~~~~~~~~VlI  186 (357)
                      ...++.+++.++..+..  .|++|||
T Consensus       153 ~~~~~~~a~~~~~~~~~--~G~~VlI  176 (177)
T d1jvba1         153 KLEEANEAIDNLENFKA--IGRQVLI  176 (177)
T ss_dssp             EGGGHHHHHHHHHTTCC--CSEEEEE
T ss_pred             HHHHHHHHHHHHHhhcc--cCCceEC
Confidence            45678889998877665  5899987

>d1yb5a1 b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=5.1e-30  Score=205.20  Aligned_cols=146  Identities=21%  Similarity=0.258  Sum_probs=128.1

Q ss_pred             hheeeehccCCCCCccee-eeecCCCCCCcEEEEEeeeccccchHHHHhcCCC-CCCCCCccCccccEEEEEeCCCCCCC
Q 018382            8 RATIGWAAKDPSGILSPY-TYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLG-MSNYPMVPGHEVVGEVKEVGSEVSNF   85 (357)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~-~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~-~~~~p~~lG~e~~G~V~~vG~~v~~~   85 (357)
                      ||+..+..+++++.+++. +++.|+|+++|||||+.++++|++|++.++|..+ ...+|.++|||++|+|+++|+++++|
T Consensus         3 MkAv~~~~~G~p~~l~~~~~~~~P~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~   82 (150)
T d1yb5a1           3 MRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIEAVGDNASAF   82 (150)
T ss_dssp             EEEEEESSCSSGGGEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCSSCCCCSSBCCCSCEEEEEEEECTTCTTC
T ss_pred             eeEEEEEccCCcceEEEEeecCCCCCCCCeEEEEEEEecCcccchhhhcCCcCccccccccCccceeeeeEeecceeecc
Confidence            444444445566667775 6899999999999999999999999999999776 35678899999999999999999999


Q ss_pred             CCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchh
Q 018382           86 KVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAG  165 (357)
Q Consensus        86 ~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~  165 (357)
                      ++||||++..                                  ..+|+|+||++++++.++++|+++++++||+++++.
T Consensus        83 ~vGdrV~~~~----------------------------------~~~G~~ae~~~v~~~~~~~iP~~ls~~~Aa~~~~~~  128 (150)
T d1yb5a1          83 KKGDRVFTSS----------------------------------TISGGYAEYALAADHTVYKLPEKLKPVIGSQYPLEK  128 (150)
T ss_dssp             CTTCEEEESC----------------------------------CSSCSSBSEEEEEGGGEEECCTTCCCCEEEEEEGGG
T ss_pred             ccCccccccc----------------------------------cccccccccccccccccccccCCCCHHHHHHhhhhh
Confidence            9999997542                                  357999999999999999999999999999999999


Q ss_pred             hhhhhhhhccCCCCCCCeEEEE
Q 018382          166 VTVFSPLSHFGLKQSGLRGGIL  187 (357)
Q Consensus       166 ~ta~~~l~~~~~~~~~~~VlI~  187 (357)
                      .|+|+++...+....|+++||+
T Consensus       129 ~ta~~~~~~~g~~~~G~~vliL  150 (150)
T d1yb5a1         129 VAEAHENIIHGSGATGKMILLL  150 (150)
T ss_dssp             HHHHHHHHHHSSCCSSEEEEEC
T ss_pred             hhehhhheEEcCcccCCEEEEC
Confidence            9999998888877999999985

>d1qora1 b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=99.96  E-value=1.2e-28  Score=196.67  Aligned_cols=141  Identities=17%  Similarity=0.196  Sum_probs=122.9

Q ss_pred             eeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCCCCE
Q 018382           11 IGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGDK   90 (357)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~   90 (357)
                      +.+..++++..+++++++.|+|+++|||||++++++|++|+++++|.++...+|.++|||++|+|+++|+++++|++|||
T Consensus         4 i~~~~~G~pe~l~~~e~~~P~p~~~eVlVkv~a~~in~~D~~~~~G~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~vGdr   83 (147)
T d1qora1           4 IEFHKHGGPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPPPSLPSGLGTEAAGIVSKVGSGVKHIKAGDR   83 (147)
T ss_dssp             EEBSSCCSGGGCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSCCSSSSBCCCSCEEEEEEEECTTCCSCCTTCE
T ss_pred             EEEcccCCCceeEEEEecCCCCCCCEEEEEEEEecccceeeeeecCCCCCCcceeeeccccccceeeeeeecccccccce
Confidence            44555677777999999999999999999999999999999999999988889999999999999999999999999999


Q ss_pred             EEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccc--cccchhhhh
Q 018382           91 VGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAA--PLLCAGVTV  168 (357)
Q Consensus        91 V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa--~~~~~~~ta  168 (357)
                      |+..                                  ....|+|+||++++.+.++++|+++++++++  +++....++
T Consensus        84 V~~~----------------------------------~~~~G~~ae~~~v~~~~~~~~P~~~~~~~a~a~~~~~~~~~~  129 (147)
T d1qora1          84 VVYA----------------------------------QSALGAYSSVHNIIADKAAILPAAIKVDVAEQQKYPLKDAQR  129 (147)
T ss_dssp             EEES----------------------------------CCSSCCSBSEEEEEGGGEEECCTTSCCCCCGGGEEEGGGHHH
T ss_pred             eeee----------------------------------ccccccceeEEEEehHHeEEcCcccchHHHHHHHHHHHHHHH
Confidence            9642                                  2357999999999999999999999887554  556677778


Q ss_pred             hhhhhccCCCCCCCeEEE
Q 018382          169 FSPLSHFGLKQSGLRGGI  186 (357)
Q Consensus       169 ~~~l~~~~~~~~~~~VlI  186 (357)
                      ++++.+.. +++|++|||
T Consensus       130 ~~~l~~~~-~~~G~~VLI  146 (147)
T d1qora1         130 AHEILESR-ATQGSSLLI  146 (147)
T ss_dssp             HHHHHHTT-CCCBCCEEE
T ss_pred             HHHHHHhC-CCCCCEEEe
Confidence            88777654 599999998

>d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.94  E-value=1.8e-27  Score=185.03  Aligned_cols=130  Identities=23%  Similarity=0.296  Sum_probs=116.3

Q ss_pred             eeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCC-CCCCCCccCccccEEEEEeCCCCCCCCCC
Q 018382           10 TIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLG-MSNYPMVPGHEVVGEVKEVGSEVSNFKVG   88 (357)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~-~~~~p~~lG~e~~G~V~~vG~~v~~~~~G   88 (357)
                      |+||.....++++++++++.|+|+++|||||++++++|++|+++++|.++ ...+|.++|+|++|+|           +|
T Consensus         1 MkA~~~~~~G~~l~~~e~~~p~p~~~eVlVkv~a~gin~~D~~~~~G~~~~~~~~P~v~G~E~~G~V-----------vG   69 (131)
T d1iz0a1           1 MKAWVLKRLGGPLELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFIPGMEVVGVV-----------EG   69 (131)
T ss_dssp             CEEEEECSTTSCEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCCEEEEEE-----------TT
T ss_pred             CcEEEEccCCCCCEEEEccCCCCCCCEEEEEEEEEeccccccccccccccccccceeEeeeeeEEee-----------cc
Confidence            57777766566799999999999999999999999999999999999876 4578999999999999           39


Q ss_pred             CEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhhh
Q 018382           89 DKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTV  168 (357)
Q Consensus        89 d~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta  168 (357)
                      |||+..                                   ..+|+|+||++++++.++++|+++++++||++++.+.||
T Consensus        70 d~V~~~-----------------------------------~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~~~~~~~Ta  114 (131)
T d1iz0a1          70 RRYAAL-----------------------------------VPQGGLAERVAVPKGALLPLPEGRPVVGPVFPFAEAEAA  114 (131)
T ss_dssp             EEEEEE-----------------------------------CSSCCSBSEEEEEGGGCEECCTTCCCEEEEEEGGGHHHH
T ss_pred             ceEEEE-----------------------------------eccCccceeeeeCHHHeEEccCCCCHHHHHHHHHHHHHH
Confidence            999654                                   257999999999999999999999999999999999999


Q ss_pred             hhhhhccCCCCCCCeEEEE
Q 018382          169 FSPLSHFGLKQSGLRGGIL  187 (357)
Q Consensus       169 ~~~l~~~~~~~~~~~VlI~  187 (357)
                      |++|.+.+  +.|++||++
T Consensus       115 ~~al~~~g--~~g~tvl~l  131 (131)
T d1iz0a1         115 FRALLDRG--HTGKVVVRL  131 (131)
T ss_dssp             HHHTTCTT--CCBEEEEEC
T ss_pred             HHHHHhcc--cCCCEEEEC
Confidence            99998866  469999874

>d1xa0a1 b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.94  E-value=1.5e-27  Score=191.41  Aligned_cols=148  Identities=22%  Similarity=0.261  Sum_probs=123.1

Q ss_pred             hheeeehccCCCC--CcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCC-CCCCCCccCccccEEEEEeCCCCCC
Q 018382            8 RATIGWAAKDPSG--ILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLG-MSNYPMVPGHEVVGEVKEVGSEVSN   84 (357)
Q Consensus         8 ~~~~~~~~~~~~~--~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~-~~~~p~~lG~e~~G~V~~vG~~v~~   84 (357)
                      ++++|+++....+  .++++++++|+|++||||||++++++|++|++++.|.++ ....|.++|+|++|+|++  ..++.
T Consensus         2 ~~~KA~v~~~~~~~~~~~i~~v~~P~~~~~eVlVkV~a~gin~~D~~~~~g~~~~~~~~p~v~g~e~~G~v~~--~~~~~   79 (152)
T d1xa0a1           2 SAFQAFVVNKTETEFTAGVQTISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGKIVKTYPFVPGIDLAGVVVS--SQHPR   79 (152)
T ss_dssp             CEEEEEEEEEETTEEEEEEEEEEGGGSCSCSEEEEEEEEECCHHHHHHTSGGGSSCCSSSBCCCSEEEEEEEE--CCSSS
T ss_pred             CceEEEEEEecCCceEEEEEEccCCCCCCCEEEEEEEEeCCChHHHHHHhhcccccccccceeeeeeeeeeec--cCCCc
Confidence            4567777654344  455789999999999999999999999999999998776 456889999999999999  56778


Q ss_pred             CCCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccch
Q 018382           85 FKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCA  164 (357)
Q Consensus        85 ~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~  164 (357)
                      |++||+|+.....                             .+...+|+|+||++++++.++++|++++ ++||+++++
T Consensus        80 ~~~g~~v~~~~~~-----------------------------~~~~~~G~~aEy~~v~~~~~~~iP~~l~-~~aa~l~~a  129 (152)
T d1xa0a1          80 FREGDEVIATGYE-----------------------------IGVTHFGGYSEYARLHGEWLVPLPKGLE-RIAQEISLA  129 (152)
T ss_dssp             CCTTCEEEEESTT-----------------------------BTTTBCCSSBSEEEECGGGCEECCTTHH-HHEEEEEGG
T ss_pred             cccCCEEEEecCc-----------------------------cccccCCCcceeeeehhhccccCCCCCC-HHHHHHHHH
Confidence            9999999643110                             0234679999999999999999999998 478889999


Q ss_pred             hhhhhhhhhccCCCCCCCeEEEEe
Q 018382          165 GVTVFSPLSHFGLKQSGLRGGILG  188 (357)
Q Consensus       165 ~~ta~~~l~~~~~~~~~~~VlI~G  188 (357)
                      .+|||.++.....+ +|++|||+|
T Consensus       130 ~~ta~~~~~~~~~~-~G~tVL~l~  152 (152)
T d1xa0a1         130 ELPQALKRILRGEL-RGRTVVRLA  152 (152)
T ss_dssp             GHHHHHHHHHHTCC-CSEEEEECC
T ss_pred             HHHHHHHHHHhcCC-CCCEEEEcC
Confidence            99999998888885 499999985

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.94  E-value=7.9e-27  Score=190.69  Aligned_cols=164  Identities=34%  Similarity=0.543  Sum_probs=146.3

Q ss_pred             CccccccccchhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCC
Q 018382          154 ALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSS  233 (357)
Q Consensus       154 ~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~  233 (357)
                      +.+.||++.|++.|+|+++.+.. +++|++|+|+|+|++|++++|+++..|++|++++++++|.+.+++ +|+++++++.
T Consensus         2 p~e~AApl~cag~Ta~~al~~~~-~~~g~~vlI~GaG~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a~~-lGa~~~i~~~   79 (168)
T d1piwa2           2 PSHLAAPLLCGGLTVYSPLVRNG-CGPGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKREDAMK-MGADHYIATL   79 (168)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHHTT-CSTTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH-HTCSEEEEGG
T ss_pred             CHHHHHHHHHHHHHHHHHHHHhC-cCCCCEEEEECCCCcchhHHHHhhhccccccccccchhHHHHhhc-cCCcEEeecc
Confidence            45778999999999999998765 499999999999999999999999999999999999999999988 9999999876


Q ss_pred             C-hhHHHHhhCCccEEEEcCCCCC--ChHHHHhccccCCeEEEEccCCCCcccchHHHhhccceEEEEeecCHHHHHHHH
Q 018382          234 D-ATRMQEAADSLDYIIDTVPANH--PLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEML  310 (357)
Q Consensus       234 ~-~~~~~~~~~~~d~v~d~~g~~~--~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~  310 (357)
                      + .++.+...+++|+++||++...  .+..++++++++|+++.+|.......++...++.+++++.|++.++++++++++
T Consensus        80 ~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~Gs~~g~~~~~~e~l  159 (168)
T d1piwa2          80 EEGDWGEKYFDTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQHEMLSLKPYGLKAVSISYSALGSIKELNQLL  159 (168)
T ss_dssp             GTSCHHHHSCSCEEEEEECCSCSTTCCTTTGGGGEEEEEEEEECCCCCSSCCEEECGGGCBSCEEEECCCCCHHHHHHHH
T ss_pred             chHHHHHhhhcccceEEEEecCCccchHHHHHHHhhccceEEEeccccccccccHHHHHhCCcEEEEEeeCCHHHHHHHH
Confidence            5 3556666779999999988753  467899999999999999987777778888888999999999999999999999


Q ss_pred             HHHHhcCCC
Q 018382          311 EFCREKGVT  319 (357)
Q Consensus       311 ~~~~~~~l~  319 (357)
                      +++++|+++
T Consensus       160 ~li~~gkIk  168 (168)
T d1piwa2         160 KLVSEKDIK  168 (168)
T ss_dssp             HHHHHTTCC
T ss_pred             HHHHhCCCC
Confidence            999999885

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.94  E-value=1.1e-26  Score=189.52  Aligned_cols=162  Identities=28%  Similarity=0.431  Sum_probs=145.7

Q ss_pred             CCccccccccchhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcC
Q 018382          153 MALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVS  232 (357)
Q Consensus       153 l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~  232 (357)
                      +++++||+++|+++|||++++++.. ++|++|+|+|+|++|++++|++|..|++|+++++++++++.+++ +|+++++|+
T Consensus         1 v~f~~aA~l~ca~~Ta~~al~~~~~-~~g~~VlV~GaG~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a~~-~Ga~~~i~~   78 (166)
T d1llua2           1 VEFAEIAPILCAGVTVYKGLKQTNA-RPGQWVAISGIGGLGHVAVQYARAMGLHVAAIDIDDAKLELARK-LGASLTVNA   78 (166)
T ss_dssp             SCHHHHGGGGTHHHHHHHHHHHHTC-CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-TTCSEEEET
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhCC-CCCCEEEEeeccccHHHHHHHHHHcCCccceecchhhHHHhhhc-cCccccccc
Confidence            5799999999999999999988654 99999999999999999999999999999999999999998888 999999998


Q ss_pred             CChhHHHHh---hCCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCcccchHHHhhccceEEEEeecCHHHHHHH
Q 018382          233 SDATRMQEA---ADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEM  309 (357)
Q Consensus       233 ~~~~~~~~~---~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~  309 (357)
                      ++.+..+.+   ..+.+.++++++....++.++++++++|+++.+|...+...++...++.+++++.|++.+++++++++
T Consensus        79 ~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~Gs~~~~~~d~~e~  158 (166)
T d1llua2          79 RQEDPVEAIQRDIGGAHGVLVTAVSNSAFGQAIGMARRGGTIALVGLPPGDFPTPIFDVVLKGLHIAGSIVGTRADLQEA  158 (166)
T ss_dssp             TTSCHHHHHHHHHSSEEEEEECCSCHHHHHHHHTTEEEEEEEEECCCCSSEEEEEHHHHHHTTCEEEECCSCCHHHHHHH
T ss_pred             cchhHHHHHHHhhcCCcccccccccchHHHHHHHHhcCCcEEEEEEecCCCccCCHHHHHhCCcEEEEEeecCHHHHHHH
Confidence            876554443   45777777888777689999999999999999998877777888889999999999999999999999


Q ss_pred             HHHHHhc
Q 018382          310 LEFCREK  316 (357)
Q Consensus       310 ~~~~~~~  316 (357)
                      ++++.+|
T Consensus       159 l~l~~~G  165 (166)
T d1llua2         159 LDFAGEG  165 (166)
T ss_dssp             HHHHHTT
T ss_pred             HHHHHCc
Confidence            9999887

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=99.93  E-value=6.1e-26  Score=185.37  Aligned_cols=165  Identities=44%  Similarity=0.762  Sum_probs=144.0

Q ss_pred             CCCccccccccchhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEc
Q 018382          152 GMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLV  231 (357)
Q Consensus       152 ~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~  231 (357)
                      ..+++.+|++.|+..|+|+++.+. .+++|++|+|+|+|++|++++|+|+..|++++++++++++.+.+++ +|+++++|
T Consensus         3 ~~~~a~~Apl~Cag~Tay~al~~~-~~~~G~~VlI~GaG~vG~~a~qlak~~Ga~~i~~~~~~~~~~~a~~-lGad~~i~   80 (168)
T d1uufa2           3 QEQLAAVAPLLCAGITTYSPLRHW-QAGPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKA-LGADEVVN   80 (168)
T ss_dssp             GGGHHHHGGGGTHHHHHHHHHHHT-TCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-HTCSEEEE
T ss_pred             cccHHHHHHHHhHHHHHHHHHHHh-CCCCCCEEEEeccchHHHHHHHHhhcccccchhhccchhHHHHHhc-cCCcEEEE
Confidence            356778889999999999999765 4599999999999999999999999999999999999999888887 99999999


Q ss_pred             CCChhHHHHhhCCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCC-cccchHHHhhccceEEEEeecCHHHHHHHH
Q 018382          232 SSDATRMQEAADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTP-MQFLTPMVMLGRKAITGSFIGSMKETKEML  310 (357)
Q Consensus       232 ~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~  310 (357)
                      +.+.+......+++|++||++|....++.++++++++|+++.+|...+. ..++...++.+++++.|++.++.+++++++
T Consensus        81 ~~~~~~~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~l~~k~~~i~Gs~~~~~~d~~e~l  160 (168)
T d1uufa2          81 SRNADEMAAHLKSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPATPHKSPEVFNLIMKRRAIAGSMIGGIPETQEML  160 (168)
T ss_dssp             TTCHHHHHTTTTCEEEEEECCSSCCCHHHHHTTEEEEEEEEECCCC-------CHHHHHTTTCEEEECCSCCHHHHHHHH
T ss_pred             CchhhHHHHhcCCCceeeeeeecchhHHHHHHHHhcCCEEEEeccCCCCcccccHHHHHHCCcEEEEEeecCHHHHHHHH
Confidence            9988776666679999999999987899999999999999999976554 346777788899999999999999999999


Q ss_pred             HHHHhcCC
Q 018382          311 EFCREKGV  318 (357)
Q Consensus       311 ~~~~~~~l  318 (357)
                      +++.+++|
T Consensus       161 ~l~a~~~I  168 (168)
T d1uufa2         161 DFCAEHGI  168 (168)
T ss_dssp             HHHHHHTC
T ss_pred             HHHHHcCC
Confidence            99998764

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=2.4e-26  Score=188.96  Aligned_cols=161  Identities=20%  Similarity=0.274  Sum_probs=141.4

Q ss_pred             CCccccccccchhhhhhhhhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEc
Q 018382          153 MALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLV  231 (357)
Q Consensus       153 l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~  231 (357)
                      ||+++||+++++++|||++|.+...+++|++|||+|+ |++|++++|+|+..|++|+++++++++.+.+++ +|+++++|
T Consensus         1 ls~~~AA~l~~~~~TA~~al~~~~~~~~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~~~-~Ga~~vi~   79 (174)
T d1yb5a2           1 LDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQ-NGAHEVFN   79 (174)
T ss_dssp             SCHHHHTTTHHHHHHHHHHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-TTCSEEEE
T ss_pred             CCHHHHHHhHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccccccCcccccccccccccccccc-cCcccccc
Confidence            6899999999999999999988888899999999986 999999999999999999999999988888887 99999999


Q ss_pred             CCChhHHHHh---hC--CccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCcccchHHHhhccceEEEEeec--CHH
Q 018382          232 SSDATRMQEA---AD--SLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIG--SMK  304 (357)
Q Consensus       232 ~~~~~~~~~~---~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~--~~~  304 (357)
                      +++.+..+++   ++  ++|+|||++|+. .++.++++++++|+++.+|... ..+++...++.+++++.|+..+  +.+
T Consensus        80 ~~~~~~~~~i~~~t~~~g~d~v~d~~g~~-~~~~~~~~l~~~G~iv~~G~~~-~~~~~~~~~~~k~~~i~g~~~~~~~~~  157 (174)
T d1yb5a2          80 HREVNYIDKIKKYVGEKGIDIIIEMLANV-NLSKDLSLLSHGGRVIVVGSRG-TIEINPRDTMAKESSIIGVTLFSSTKE  157 (174)
T ss_dssp             TTSTTHHHHHHHHHCTTCEEEEEESCHHH-HHHHHHHHEEEEEEEEECCCCS-CEEECTHHHHTTTCEEEECCGGGCCHH
T ss_pred             cccccHHHHhhhhhccCCceEEeecccHH-HHHHHHhccCCCCEEEEEecCC-CCCCCHHHHHHCCCEEEEEEecCCCHH
Confidence            9887665544   22  799999999986 8999999999999999998643 4667778888999999999764  457


Q ss_pred             HHHHHHHHHHhc
Q 018382          305 ETKEMLEFCREK  316 (357)
Q Consensus       305 ~~~~~~~~~~~~  316 (357)
                      +++++.++++++
T Consensus       158 ~~~~~~~~l~~g  169 (174)
T d1yb5a2         158 EFQQYAAALQAG  169 (174)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            788888887765

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.93  E-value=4.3e-26  Score=186.23  Aligned_cols=165  Identities=19%  Similarity=0.238  Sum_probs=136.9

Q ss_pred             CCccccccccchhhhhhhhh---hccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcE
Q 018382          153 MALEQAAPLLCAGVTVFSPL---SHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQ  228 (357)
Q Consensus       153 l~~~~aa~~~~~~~ta~~~l---~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~  228 (357)
                      ||++|||+++++++|||.++   ...+..++|++|||+|+ |++|.+++|+|+..|++|+++++++++.+.+++ +|+++
T Consensus         1 lS~~eAAal~~aglTA~~a~~~L~~~g~~~~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~~-lGa~~   79 (176)
T d1xa0a2           1 LTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRV-LGAKE   79 (176)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHH-TTCSE
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHHh-cccce
Confidence            68999999999999999665   45677788999999986 999999999999999999999999999999988 99999


Q ss_pred             EEcCCChh--HHHHhh-CCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCC-cccchHHHhhccceEEEEe--ecC
Q 018382          229 YLVSSDAT--RMQEAA-DSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTP-MQFLTPMVMLGRKAITGSF--IGS  302 (357)
Q Consensus       229 vv~~~~~~--~~~~~~-~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~--~~~  302 (357)
                      ++|+++..  ..+... +++|+|||++|+. .+..++++|+++|+++.+|...+. ..++...++.|+++++|..  ..+
T Consensus        80 vi~~~~~~~~~~~~~~~~gvD~vid~vgg~-~~~~~l~~l~~~Griv~~G~~~g~~~~~~~~~~~~k~~~i~Gv~~~~~~  158 (176)
T d1xa0a2          80 VLAREDVMAERIRPLDKQRWAAAVDPVGGR-TLATVLSRMRYGGAVAVSGLTGGAEVPTTVHPFILRGVSLLGIDSVYCP  158 (176)
T ss_dssp             EEECC---------CCSCCEEEEEECSTTT-THHHHHHTEEEEEEEEECSCCSSSCCCCCSHHHHHTTCEEEECCSSSCC
T ss_pred             eeecchhHHHHHHHhhccCcCEEEEcCCch-hHHHHHHHhCCCceEEEeecccCcccCCCHHHHHHCCcEEEEEeCCcCC
Confidence            99987532  122222 3899999999998 899999999999999999987554 5688888999999999954  445


Q ss_pred             HHHHHHHHHHHHhcCCCc
Q 018382          303 MKETKEMLEFCREKGVTS  320 (357)
Q Consensus       303 ~~~~~~~~~~~~~~~l~~  320 (357)
                      .+....+++.+ .++|+|
T Consensus       159 ~~~~~~~~~~l-ag~lkP  175 (176)
T d1xa0a2         159 MDLRLRIWERL-AGDLKP  175 (176)
T ss_dssp             HHHHHHHHHHH-HTTTCC
T ss_pred             HHHHHHHHHHH-hcccCC
Confidence            57777777776 377765

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.93  E-value=7.4e-26  Score=185.01  Aligned_cols=165  Identities=31%  Similarity=0.471  Sum_probs=148.8

Q ss_pred             CCccccccccchhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcC
Q 018382          153 MALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVS  232 (357)
Q Consensus       153 l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~  232 (357)
                      ||+++||+++++++|||++++.... +||++|||+|+|++|++++|+++..|++|++++++++|.+.+++ +|++.++++
T Consensus         1 ls~eeAA~l~~~~~Ta~~al~~~~~-~~g~~vlv~G~G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~k~-~Ga~~~~~~   78 (168)
T d1rjwa2           1 LSFEEAAPIFCAGVTTYKALKVTGA-KPGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKE-LGADLVVNP   78 (168)
T ss_dssp             SCHHHHGGGGTHHHHHHHHHHHHTC-CTTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-TTCSEEECT
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhCC-CCCCEEEEeecccchhhhhHHHhcCCCeEeccCCCHHHhhhhhh-cCcceeccc
Confidence            6899999999999999999998775 99999999999999999999999999999999999999999888 999999998


Q ss_pred             CChhH---HHHhhCCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCcccchHHHhhccceEEEEeecCHHHHHHH
Q 018382          233 SDATR---MQEAADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEM  309 (357)
Q Consensus       233 ~~~~~---~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~  309 (357)
                      ++.+.   ++..+.+.|.+++++++...++.++++++++|+++.+|.......++...++.+++++.|+..++.++++++
T Consensus        79 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~a~~~l~~~G~i~~~g~~~~~~~~~~~~~~~~~~~i~gs~~~~~~~~~~~  158 (168)
T d1rjwa2          79 LKEDAAKFMKEKVGGVHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPEEMPIPIFDTVLNGIKIIGSIVGTRKDLQEA  158 (168)
T ss_dssp             TTSCHHHHHHHHHSSEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSSEEEEEHHHHHHTTCEEEECCSCCHHHHHHH
T ss_pred             ccchhhhhcccccCCCceEEeecCCHHHHHHHHHHhccCCceEecccccCCCCCCHHHHHHCCcEEEEEeeCCHHHHHHH
Confidence            87544   444456777777777777689999999999999999998888788888889999999999999999999999


Q ss_pred             HHHHHhcCCC
Q 018382          310 LEFCREKGVT  319 (357)
Q Consensus       310 ~~~~~~~~l~  319 (357)
                      ++++++|+++
T Consensus       159 l~l~~~Gkik  168 (168)
T d1rjwa2         159 LQFAAEGKVK  168 (168)
T ss_dssp             HHHHHTTSCC
T ss_pred             HHHHHhCCCC
Confidence            9999999885

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=99.93  E-value=7.5e-26  Score=185.33  Aligned_cols=163  Identities=23%  Similarity=0.422  Sum_probs=146.1

Q ss_pred             CCccccccccchhhhhhhhhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCcEEE
Q 018382          153 MALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGADQYL  230 (357)
Q Consensus       153 l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~~vv  230 (357)
                      |++.+||+++|++.|||+++.+... +++++|+|+|+ |++|++++|+++..|+ +|+++++++++.+.+++ +|+++++
T Consensus         1 l~~~eAA~l~c~~~Ta~~al~~~~~-~~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~-~Ga~~~i   78 (170)
T d1jvba2           1 LNAVEAAPLTCSGITTYRAVRKASL-DPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKR-AGADYVI   78 (170)
T ss_dssp             SCHHHHGGGGTHHHHHHHHHHHTTC-CTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHH-HTCSEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhCC-CCCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHH-cCCceee
Confidence            5789999999999999999987664 99999999996 9999999999999996 89999999999988888 9999999


Q ss_pred             cCCChhHHHHhh-----CCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCcccchHHHhhccceEEEEeecCHHH
Q 018382          231 VSSDATRMQEAA-----DSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSMKE  305 (357)
Q Consensus       231 ~~~~~~~~~~~~-----~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~  305 (357)
                      ++++.+..++..     +++|++|||+|+...++.++++++++|+++.+|.......++...++.+++++.|++.+++++
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~a~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~i~i~Gs~~~~~~d  158 (170)
T d1jvba2          79 NASMQDPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFVGSLVGNQSD  158 (170)
T ss_dssp             ETTTSCHHHHHHHHTTTSCEEEEEESCCCHHHHTTGGGGEEEEEEEEECCSSCCCCCCCHHHHHHHTCEEEECCSCCHHH
T ss_pred             ccCCcCHHHHHHHHhhcccchhhhcccccchHHHhhhhhcccCCEEEEeccccCccccCHHHHHhCCcEEEEEecCCHHH
Confidence            988765544432     269999999999767889999999999999999887778888888999999999999999999


Q ss_pred             HHHHHHHHHhcC
Q 018382          306 TKEMLEFCREKG  317 (357)
Q Consensus       306 ~~~~~~~~~~~~  317 (357)
                      ++++++++++|+
T Consensus       159 ~~~~l~lv~~GK  170 (170)
T d1jvba2         159 FLGIMRLAEAGK  170 (170)
T ss_dssp             HHHHHHHHHTTS
T ss_pred             HHHHHHHHHcCC
Confidence            999999999885

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=99.93  E-value=2.3e-25  Score=182.94  Aligned_cols=164  Identities=21%  Similarity=0.249  Sum_probs=141.1

Q ss_pred             CCccccccccchhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCcEEEc
Q 018382          153 MALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGADQYLV  231 (357)
Q Consensus       153 l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~~vv~  231 (357)
                      ++++.||.++|++.|||+++.+...+++|++|+|+|+|++|++++|+|+..|+ +|++++++++|.+.+++ +|+++++|
T Consensus         1 vP~e~aapl~ca~~Ta~~a~~~~~~~~~g~~VlI~G~G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~~-~Ga~~~i~   79 (174)
T d1f8fa2           1 VPIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQ-LGATHVIN   79 (174)
T ss_dssp             SCGGGTGGGGTHHHHHHHHHHTTTCCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHH-HTCSEEEE
T ss_pred             CCHHHHHHHhhHHHHHHHHHHHhhCCCCCCEEEEeCCCHHHhhhhhcccccccceeeeeccHHHHHHHHHH-cCCeEEEe
Confidence            45788999999999999998888888999999999999999999999999999 55677788888888887 99999999


Q ss_pred             CCChhHHHHh---h-CCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCC--CcccchHHHhhccceEEEEeecC---
Q 018382          232 SSDATRMQEA---A-DSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINT--PMQFLTPMVMLGRKAITGSFIGS---  302 (357)
Q Consensus       232 ~~~~~~~~~~---~-~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~~~i~g~~~~~---  302 (357)
                      +++++..+++   + +++|+||||+|....++.++++++++|+++.+|....  ...++...++.+++++.|++.++   
T Consensus        80 ~~~~~~~~~i~~~t~gg~D~vid~~G~~~~~~~~~~~~~~~G~i~~~G~~~~~~~~~~~~~~~~~k~~~i~Gs~~g~~~~  159 (174)
T d1f8fa2          80 SKTQDPVAAIKEITDGGVNFALESTGSPEILKQGVDALGILGKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVEGSGSP  159 (174)
T ss_dssp             TTTSCHHHHHHHHTTSCEEEEEECSCCHHHHHHHHHTEEEEEEEEECCCCSTTCCCCCCHHHHHHTTCEEEECSGGGSCH
T ss_pred             CCCcCHHHHHHHHcCCCCcEEEEcCCcHHHHHHHHhcccCceEEEEEeecCCCcccccCHHHHHHCCCEEEEEEecCCCh
Confidence            8886555543   3 3799999999997678999999999999999987543  35678888999999999998654   


Q ss_pred             HHHHHHHHHHHHhcC
Q 018382          303 MKETKEMLEFCREKG  317 (357)
Q Consensus       303 ~~~~~~~~~~~~~~~  317 (357)
                      .++++++++++++|+
T Consensus       160 ~~~~~~~~~l~~~Gk  174 (174)
T d1f8fa2         160 KKFIPELVRLYQQGK  174 (174)
T ss_dssp             HHHHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHHcCC
Confidence            467899999999875

>d1tt7a1 b.35.1.2 (A:2-127,A:295-330) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=99.92  E-value=3.6e-27  Score=191.16  Aligned_cols=150  Identities=21%  Similarity=0.175  Sum_probs=124.3

Q ss_pred             eeeehc--cCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCC-CCCCCCccCccccEEEEEeCCCCCCCC
Q 018382           10 TIGWAA--KDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLG-MSNYPMVPGHEVVGEVKEVGSEVSNFK   86 (357)
Q Consensus        10 ~~~~~~--~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~-~~~~p~~lG~e~~G~V~~vG~~v~~~~   86 (357)
                      ++++..  .+++..+++++++.|+|.+|||||||+|+++|++|++.+.|.++ ....|.++|+|++|+|++  +.+++++
T Consensus         4 ~ka~~~~~~g~~~~l~~~~v~~p~l~~~eVLVkV~a~gin~~D~~~~~g~~~~~~~~~~~~g~e~~G~v~~--~~~~~~~   81 (162)
T d1tt7a1           4 FQALQAEKNADDVSVHVKTISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGNIVREYPLILGIDAAGTVVS--SNDPRFA   81 (162)
T ss_dssp             EEEEEECCGGGSCCCEEEEEESSSSCSSSEEEEECCEEECHHHHHHTSTTCTTCSSCSEECCSEEEEEEEE--CSSTTCC
T ss_pred             EEEEEEEecCCCeEEEEEEcCCCCCCCCEEEEEEEEecccchhhheeeecccccccceeeeeeeccccccc--ccccccc
Confidence            455554  44556688999999999999999999999999999999999876 346678999999999998  5677899


Q ss_pred             CCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhh
Q 018382           87 VGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGV  166 (357)
Q Consensus        87 ~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~  166 (357)
                      +||+|+.....                             .|...+|+|+||++++++.++++|+++|+++||++++.++
T Consensus        82 ~g~~v~~~~~~-----------------------------~g~~~~G~~aey~~v~~~~l~~iP~~ls~~~Aa~~~~~~~  132 (162)
T d1tt7a1          82 EGDEVIATSYE-----------------------------LGVSRDGGLSEYASVPGDWLVPLPQNLSLKEAMVDQLLTI  132 (162)
T ss_dssp             TTCEEEEESTT-----------------------------BTTTBCCSSBSSEEECGGGEEECCTTCCHHHHHHSCSTTS
T ss_pred             cceeeEeeecc-----------------------------ceeccccccceEEEecHHHEEECCCCCCHHHHHHHHHHHH
Confidence            99999654211                             1345789999999999999999999999999999999999


Q ss_pred             hhhhhhhccCCCCCCCeEEEEec-Ch
Q 018382          167 TVFSPLSHFGLKQSGLRGGILGL-GG  191 (357)
Q Consensus       167 ta~~~l~~~~~~~~~~~VlI~G~-g~  191 (357)
                      |||.++..... ..+++|||+|+ |+
T Consensus       133 ta~~~~~~~~~-~~~~~Vli~ga~G~  157 (162)
T d1tt7a1         133 VDREVSLEETP-GALKDILQNRIQGR  157 (162)
T ss_dssp             EEEEECSTTHH-HHHHHTTTTCCSSE
T ss_pred             HHHHHHHhcCC-CCCCEEEEECCcce
Confidence            99998765432 55677888876 53

>d1o89a1 b.35.1.2 (A:1-115,A:293-323) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.92  E-value=2.9e-25  Score=176.07  Aligned_cols=134  Identities=20%  Similarity=0.269  Sum_probs=111.8

Q ss_pred             eeeehccCCC--CCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCC-CCCCCCccCccccEEEEEeCCCCCCCC
Q 018382           10 TIGWAAKDPS--GILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLG-MSNYPMVPGHEVVGEVKEVGSEVSNFK   86 (357)
Q Consensus        10 ~~~~~~~~~~--~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~-~~~~p~~lG~e~~G~V~~vG~~v~~~~   86 (357)
                      |+|+++...+  ..+++++++.|+|++|||||||+|++||++|++...|.++ ...+|.++|+|++|+|+++|.  +.|+
T Consensus         1 MkA~v~~~~~~~~~l~i~~v~~p~~~~geVlVkV~a~gin~~D~~~~~G~~~~~~~~p~v~G~e~~G~V~~~~~--~~~~   78 (146)
T d1o89a1           1 LQALLLEQQDGKTLASVQTLDESRLPEGDVTVDVHWSSLNYKDALAITGKGKIIRNFPMIPGIDFAGTVRTSED--PRFH   78 (146)
T ss_dssp             CEEEEEECC---CEEEEEECCGGGSCSCSEEEEEEEEECCHHHHHHHHTCSSCCCSSSBCCCSEEEEEEEEECS--TTCC
T ss_pred             CeEEEEEcCCCceEEEEEEcCCCCCCCCEEEEEEeeccCccceeeEEEeecccccccceeccccccccceeecc--CCcc
Confidence            5666654333  3477889999999999999999999999999999999876 457789999999999999766  4799


Q ss_pred             CCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhh
Q 018382           87 VGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGV  166 (357)
Q Consensus        87 ~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~  166 (357)
                      +||+|.+....                             .|...+|+|+||+++++++++++|+++|+++||++++++.
T Consensus        79 ~g~~v~~~~~~-----------------------------~g~~~~G~~Aey~~v~~~~vv~lP~~ls~~eAA~l~~a~~  129 (146)
T d1o89a1          79 AGQEVLLTGWG-----------------------------VGENHWGGLAEQARVKGDWLVAMPQGQAAKEISLSEAPNF  129 (146)
T ss_dssp             TTCEEEEECTT-----------------------------BTTTBCCSSBSEEEECGGGCEECCTTSCCEEECGGGHHHH
T ss_pred             ceeeEEeeccc-----------------------------ceecCCCcceeeeeeeeeeEEECCCCCCHHHHHHHHHHHH
Confidence            99999754211                             1344689999999999999999999999999999999999


Q ss_pred             hhhhhhhc
Q 018382          167 TVFSPLSH  174 (357)
Q Consensus       167 ta~~~l~~  174 (357)
                      ||+.++..
T Consensus       130 tA~~~~~~  137 (146)
T d1o89a1         130 AEAIINNQ  137 (146)
T ss_dssp             HHHHHTTC
T ss_pred             HHHHHHHh
Confidence            98766543

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=99.92  E-value=1.3e-24  Score=178.15  Aligned_cols=161  Identities=25%  Similarity=0.368  Sum_probs=140.1

Q ss_pred             ccccccccchhhhhhhhhhccC-CCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCcEEEcC
Q 018382          155 LEQAAPLLCAGVTVFSPLSHFG-LKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGADQYLVS  232 (357)
Q Consensus       155 ~~~aa~~~~~~~ta~~~l~~~~-~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~~vv~~  232 (357)
                      +.++|+++++++|||+++.+.. .++||++|||+|+|++|++++|+++..|+ +|++++++++|.+.+++ +|+++++++
T Consensus         6 l~eaA~l~~~~~Ta~~al~~~~~~~~~g~~vli~GaG~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~-~ga~~~i~~   84 (172)
T d1h2ba2           6 LVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAER-LGADHVVDA   84 (172)
T ss_dssp             HHHTGGGGTHHHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHH-TTCSEEEET
T ss_pred             HHHHhHHHhHHHHHHHHHHHhhhccCCCCEEEEeCCChHHHHHHHHHHhhcCcccccccchhHHHHHHhh-cccceeecC
Confidence            5688999999999999998865 46899999999999999999999999998 77788888888888887 999999998


Q ss_pred             CChhH--HHHhhC--CccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCcccchHHHhhccceEEEEeecCHHHHHH
Q 018382          233 SDATR--MQEAAD--SLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKE  308 (357)
Q Consensus       233 ~~~~~--~~~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~  308 (357)
                      ++...  ..+.+.  ++|+|||++|....++.++++++++|+++.+|.. ....++...++.+++++.|++.++++++++
T Consensus        85 ~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~G~iv~~G~~-~~~~~~~~~l~~k~~~i~Gs~~~~~~d~~~  163 (172)
T d1h2ba2          85 RRDPVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLGRMGRLIIVGYG-GELRFPTIRVISSEVSFEGSLVGNYVELHE  163 (172)
T ss_dssp             TSCHHHHHHHHTTTCCEEEEEESSCCHHHHHHGGGGEEEEEEEEECCCS-SCCCCCHHHHHHTTCEEEECCSCCHHHHHH
T ss_pred             cccHHHHHHHhhCCCCceEEEEecCcchHHHHHHHHHhCCCEEEEEeCc-ccccCCHHHHHhCCcEEEEEEecCHHHHHH
Confidence            76432  233332  7999999999976789999999999999999864 346788888999999999999999999999


Q ss_pred             HHHHHHhcC
Q 018382          309 MLEFCREKG  317 (357)
Q Consensus       309 ~~~~~~~~~  317 (357)
                      +++++++|+
T Consensus       164 ~l~l~~~GK  172 (172)
T d1h2ba2         164 LVTLALQGK  172 (172)
T ss_dssp             HHHHHHTTS
T ss_pred             HHHHHHcCC
Confidence            999999885

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=99.91  E-value=3.5e-24  Score=175.22  Aligned_cols=162  Identities=22%  Similarity=0.332  Sum_probs=135.5

Q ss_pred             CccccccccchhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCcEEEcC
Q 018382          154 ALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGADQYLVS  232 (357)
Q Consensus       154 ~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~~vv~~  232 (357)
                      ++++||.++|++.|+|+++.+...+++|++|+|+|+|++|++++|+++..|+ +|++++.+++|++.+++ +|++++++.
T Consensus         2 ~Le~aa~l~Ca~~T~~~a~~~~a~v~~G~~VlV~G~G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~~-~Ga~~~i~~   80 (174)
T d1e3ia2           2 NLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKA-LGATDCLNP   80 (174)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-TTCSEEECG
T ss_pred             CHHHHHHhhhHHHHHHHHHHHhhCCCCCCEEEEECCChHHHHHHHHHHHhCCceeeeeccchHHHHHHHH-hCCCcccCC
Confidence            5789999999999999998887778999999999999999999999999999 78888999999888888 999999986


Q ss_pred             CChh-H----HHHhh-CCccEEEEcCCCCCChHHHHhccccC-CeEEEEccCCCCcccchHHHhhccceEEEEeecC---
Q 018382          233 SDAT-R----MQEAA-DSLDYIIDTVPANHPLEPYLSLLKLD-GKLILTGVINTPMQFLTPMVMLGRKAITGSFIGS---  302 (357)
Q Consensus       233 ~~~~-~----~~~~~-~~~d~v~d~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~---  302 (357)
                      +..+ .    .+... +++|+||||+|....++.++++++++ |+++.+|.......++...++. +.++.|++.++   
T Consensus        81 ~~~~~~~~~~~~~~~~~G~d~vie~~G~~~~~~~a~~~~~~g~G~~v~vG~~~~~~~i~~~~~~~-~k~i~Gs~~Gs~~~  159 (174)
T d1e3ia2          81 RELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVDEMTIPTVDVIL-GRSINGTFFGGWKS  159 (174)
T ss_dssp             GGCSSCHHHHHHHHHTSCBSEEEESSCCHHHHHHHHHTBCTTTCEEEECCCSSSEEEEEHHHHHT-TCEEEECSGGGCCH
T ss_pred             ccchhhhhhhHhhhhcCCCcEEEEecccchHHHHHHHHhhcCCeEEEecCCCCCccccchHHHhc-cCEEEEEEeeCCCh
Confidence            5421 1    22222 48999999999987899999999996 9999999887767777666554 46899998754   


Q ss_pred             HHHHHHHHHHHHhcC
Q 018382          303 MKETKEMLEFCREKG  317 (357)
Q Consensus       303 ~~~~~~~~~~~~~~~  317 (357)
                      .++++++++++++|+
T Consensus       160 ~~d~p~li~l~~~GK  174 (174)
T d1e3ia2         160 VDSVPNLVSDYKNKK  174 (174)
T ss_dssp             HHHHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHHCcC
Confidence            467788888888764

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=99.91  E-value=1.3e-24  Score=179.85  Aligned_cols=162  Identities=23%  Similarity=0.378  Sum_probs=138.5

Q ss_pred             CccccccccchhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCcEEEcC
Q 018382          154 ALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGADQYLVS  232 (357)
Q Consensus       154 ~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~~vv~~  232 (357)
                      +++.+|++.|+++|||+++.+...+++|++|||+|+|++|++++|+|+..|+ +|+++++++++.+.+++ +|+++++|+
T Consensus         2 d~~~~a~~~c~~~ta~~al~~~~~~~~G~~VlV~GaG~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~~-lGa~~vi~~   80 (182)
T d1vj0a2           2 DLDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEE-IGADLTLNR   80 (182)
T ss_dssp             CHHHHHHHTTHHHHHHHHHHTCSSCCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHH-TTCSEEEET
T ss_pred             cHHHHHHhhcHHHHHHHHHHHHhCCCCCCEEEEECCCccchhheeccccccccccccccccccccccccc-ccceEEEec
Confidence            3457888999999999999998888999999999999999999999999998 89999999999998888 999999988


Q ss_pred             CChh---H---HHHhhC--CccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCC--cccchH-HHhhccceEEEEeec
Q 018382          233 SDAT---R---MQEAAD--SLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTP--MQFLTP-MVMLGRKAITGSFIG  301 (357)
Q Consensus       233 ~~~~---~---~~~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~~~~~~-~~~~~~~~i~g~~~~  301 (357)
                      ++.+   .   +.+...  ++|+||||+|....++.++++++++|+++.+|.....  ..++.. .++.|++++.|++.+
T Consensus        81 ~~~~~~~~~~~i~~~~~~~g~Dvvid~vG~~~~~~~a~~~l~~~G~iv~~G~~~~~~~~~~~~~~~l~~k~l~i~G~~~~  160 (182)
T d1vj0a2          81 RETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGFYSVAGVAVPQDPVPFKVYEWLVLKNATFKGIWVS  160 (182)
T ss_dssp             TTSCHHHHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCSCCCCEEECHHHHTTTTTCEEEECCCC
T ss_pred             cccchHHHHHHHHHhhCCCCceEEeecCCchhHHHHHHHHhcCCCEEEEEeecCCCCccccccHHHHHHCCcEEEEEEeC
Confidence            7643   2   223332  7999999999986789999999999999999875433  344443 467899999999999


Q ss_pred             CHHHHHHHHHHHHhc
Q 018382          302 SMKETKEMLEFCREK  316 (357)
Q Consensus       302 ~~~~~~~~~~~~~~~  316 (357)
                      +.+++++++++++++
T Consensus       161 ~~~~~~~~~~~i~~~  175 (182)
T d1vj0a2         161 DTSHFVKTVSITSRN  175 (182)
T ss_dssp             CHHHHHHHHHHHHTC
T ss_pred             CHHHHHHHHHHHHHC
Confidence            999999999998875

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.91  E-value=4.3e-25  Score=183.03  Aligned_cols=163  Identities=20%  Similarity=0.237  Sum_probs=136.1

Q ss_pred             cccccccchhhhhhhhhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCC
Q 018382          156 EQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSD  234 (357)
Q Consensus       156 ~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~  234 (357)
                      +|||+++++++|||++|++...+++|++|||+|+ |++|++++|+|+..|++|+++++++++.+.+++ +|+++++++++
T Consensus         1 eeAA~l~~~~~TA~~al~~~~~~~~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~l~~-~Ga~~vi~~~~   79 (183)
T d1pqwa_           1 NEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSR-LGVEYVGDSRS   79 (183)
T ss_dssp             CHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHT-TCCSEEEETTC
T ss_pred             CchhhhhHHHHHHHHHHHHHhCCCCCCEEEEECCCCCcccccchhhccccccceeeeccccccccccc-ccccccccCCc
Confidence            5899999999999999999988899999999986 999999999999999999999999988888877 99999999988


Q ss_pred             hhHHHHh---hC--CccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCcccc-hHHHhhccceEEEEeecC------
Q 018382          235 ATRMQEA---AD--SLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFL-TPMVMLGRKAITGSFIGS------  302 (357)
Q Consensus       235 ~~~~~~~---~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~-~~~~~~~~~~i~g~~~~~------  302 (357)
                      ++..+++   ++  ++|++||++|+. .++.++++++++|+++.+|......... ....+.++.++.++....      
T Consensus        80 ~~~~~~v~~~t~~~g~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (183)
T d1pqwa_          80 VDFADEILELTDGYGVDVVLNSLAGE-AIQRGVQILAPGGRFIELGKKDVYADASLGLAALAKSASFSVVDLDLNLKLQP  158 (183)
T ss_dssp             STHHHHHHHHTTTCCEEEEEECCCTH-HHHHHHHTEEEEEEEEECSCGGGTTTCEEEGGGGTTTCEEEECCHHHHHHHCH
T ss_pred             cCHHHHHHHHhCCCCEEEEEecccch-HHHHHHHHhcCCCEEEEEccCCCCCCcccchHHHhCCcEEEEEEccceeccCH
Confidence            7665554   32  799999999986 8999999999999999998765433222 222346778888776431      


Q ss_pred             ---HHHHHHHHHHHHhcCCCc
Q 018382          303 ---MKETKEMLEFCREKGVTS  320 (357)
Q Consensus       303 ---~~~~~~~~~~~~~~~l~~  320 (357)
                         .+.++++++++++|++++
T Consensus       159 ~~~~~~~~~v~~~i~~G~i~p  179 (183)
T d1pqwa_         159 ARYRQLLQHILQHVADGKLEV  179 (183)
T ss_dssp             HHHHHHHHHHHHHHHTTSSCC
T ss_pred             HHHHHHHHHHHHHHHCCCCce
Confidence               255788889999999987

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=3.8e-24  Score=175.18  Aligned_cols=163  Identities=21%  Similarity=0.230  Sum_probs=141.0

Q ss_pred             CCccccccccchhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCcEEEc
Q 018382          153 MALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGADQYLV  231 (357)
Q Consensus       153 l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~~vv~  231 (357)
                      +|+++||.+ .++++||+++++... ++|++|+|+|+|++|++++|+++..|+ +|++++++++|++.+++ +|++++++
T Consensus         1 vS~e~Aal~-epla~a~~a~~~~~~-~~gd~VlI~G~G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~~-~Ga~~~~~   77 (171)
T d1pl8a2           1 VTFEEGALI-EPLSVGIHACRRGGV-TLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKE-IGADLVLQ   77 (171)
T ss_dssp             SCHHHHHHH-HHHHHHHHHHHHHTC-CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH-TTCSEEEE
T ss_pred             CCHHHHHHH-HHHHHHHHHHHHhCC-CCCCEEEEECCCccHHHHHHHHHHcCCceEEeccCCHHHHHHHHH-hCCccccc
Confidence            578898844 577889999988765 999999999999999999999999999 89999999999998888 99999988


Q ss_pred             CCChhH---HHHhh----CCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCcccchHHHhhccceEEEEeecCHH
Q 018382          232 SSDATR---MQEAA----DSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSMK  304 (357)
Q Consensus       232 ~~~~~~---~~~~~----~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~  304 (357)
                      .++.+.   .+.+.    .++|+||||+|....++.++++++++|+++.+|.......++...++.|++++.|++.+ .+
T Consensus        78 ~~~~~~~~~~~~~~~~~g~g~Dvvid~~G~~~~~~~a~~~~~~gG~iv~~G~~~~~~~~~~~~~~~k~l~i~Gs~~~-~~  156 (171)
T d1pl8a2          78 ISKESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSEMTTVPLLHAAIREVDIKGVFRY-CN  156 (171)
T ss_dssp             CSSCCHHHHHHHHHHHHTSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCCSCCCCCHHHHHHTTCEEEECCSC-SS
T ss_pred             ccccccccccccccccCCCCceEEEeccCCchhHHHHHHHhcCCCEEEEEecCCCCCccCHHHHHHCCcEEEEEeCC-Hh
Confidence            775432   22222    37999999999986789999999999999999998877788899999999999999875 46


Q ss_pred             HHHHHHHHHHhcCCC
Q 018382          305 ETKEMLEFCREKGVT  319 (357)
Q Consensus       305 ~~~~~~~~~~~~~l~  319 (357)
                      +|+++++++++|++.
T Consensus       157 ~~~~al~li~~gkid  171 (171)
T d1pl8a2         157 TWPVAISMLASKSVN  171 (171)
T ss_dssp             CHHHHHHHHHTTSCC
T ss_pred             HHHHHHHHHHcCCCC
Confidence            799999999999874

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.91  E-value=1.5e-24  Score=177.24  Aligned_cols=147  Identities=22%  Similarity=0.309  Sum_probs=122.7

Q ss_pred             CCccccccccchhhhhhhhhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEc
Q 018382          153 MALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLV  231 (357)
Q Consensus       153 l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~  231 (357)
                      +|++|||+++++++|||++|.+. .++||++|||+|+ |++|++++|+|+..|++|+++++++++.+.+++ +|+++++|
T Consensus         1 ls~eeAA~l~~~~~TA~~al~~~-~~~~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~~-lGa~~~i~   78 (171)
T d1iz0a2           1 LSPEEAAAFPVSFLTAYLALKRA-QARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLA-LGAEEAAT   78 (171)
T ss_dssp             CCHHHHHTSHHHHHHHHHHHHHT-TCCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHH-TTCSEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHh-CCCCCCEEEEEeccccchhhhhhhhcccccccccccccccccccccc-cccceeee
Confidence            68999999999999999999874 5699999999986 999999999999999999999999999988888 99999999


Q ss_pred             CCChhHHHHhhCCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCC-cccchHHHhhccceEEEEeecCH
Q 018382          232 SSDATRMQEAADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTP-MQFLTPMVMLGRKAITGSFIGSM  303 (357)
Q Consensus       232 ~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~~~  303 (357)
                      +.+.........++|+|||++| . .++.++++++++|+++.+|...+. ..++...++.+++++.|++....
T Consensus        79 ~~~~~~~~~~~~g~D~v~d~~G-~-~~~~~~~~l~~~G~~v~~G~~~g~~~~~~~~~~~~k~~~i~g~~~~~~  149 (171)
T d1iz0a2          79 YAEVPERAKAWGGLDLVLEVRG-K-EVEESLGLLAHGGRLVYIGAAEGEVAPIPPLRLMRRNLAVLGFWLTPL  149 (171)
T ss_dssp             GGGHHHHHHHTTSEEEEEECSC-T-THHHHHTTEEEEEEEEEC-------CCCCTTHHHHTTCEEEECCHHHH
T ss_pred             hhhhhhhhhccccccccccccc-h-hHHHHHHHHhcCCcEEEEeCCCCCCCCccHHHHHHCCcEEEEEeCcCh
Confidence            8764322223358999999988 3 689999999999999999987543 45777888899999999987543

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=99.91  E-value=2.9e-24  Score=175.89  Aligned_cols=163  Identities=18%  Similarity=0.165  Sum_probs=133.9

Q ss_pred             CCccccccccchhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCcEEEc
Q 018382          153 MALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGADQYLV  231 (357)
Q Consensus       153 l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~~vv~  231 (357)
                      +++|+|+.+++++.|+|++++.+. +++|++|+|+|+|++|++++|+|+..|+ +|++++++++|.+.+++ +|+++++|
T Consensus         1 ip~e~A~~l~~~~~ta~~a~~~a~-~~~g~~VlI~GaG~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~~-lGa~~~i~   78 (174)
T d1jqba2           1 MPLENAVMITDMMTTGFHGAELAD-IEMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKF-YGATDILN   78 (174)
T ss_dssp             SCHHHHHTTTTHHHHHHHHHHHTT-CCTTCCEEEECCSHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHHH-HTCSEEEC
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHhC-CCCCCEEEEEcCCcchhhhhhhhhcccccccccccchhhhHHHHHh-hCcccccc
Confidence            578999999999999999998765 5999999999999999999999999998 79999999999888887 99999999


Q ss_pred             CCChhHHH---HhhC--CccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCcccc--h--HHHhhccceEEEEeecC
Q 018382          232 SSDATRMQ---EAAD--SLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFL--T--PMVMLGRKAITGSFIGS  302 (357)
Q Consensus       232 ~~~~~~~~---~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~--~--~~~~~~~~~i~g~~~~~  302 (357)
                      +++++..+   ++++  ++|+||||+|....++.++++++++|+++.+|.......++  .  .....++.++.++....
T Consensus        79 ~~~~~~~~~v~~~t~g~G~D~vid~~g~~~~~~~a~~~~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~  158 (174)
T d1jqba2          79 YKNGHIEDQVMKLTNGKGVDRVIMAGGGSETLSQAVKMVKPGGIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGLCPG  158 (174)
T ss_dssp             GGGSCHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCCSSSEEEEETTTTGGGTBCCEEEEBCCCC
T ss_pred             ccchhHHHHHHHHhhccCcceEEEccCCHHHHHHHHHHHhcCCEEEEEeecCCCCcCcCcHhHHHHHhCccEEEEecCCC
Confidence            88755444   3443  79999999998867899999999999999999765443322  2  22345778999988765


Q ss_pred             HH-HHHHHHHHHHhcC
Q 018382          303 MK-ETKEMLEFCREKG  317 (357)
Q Consensus       303 ~~-~~~~~~~~~~~~~  317 (357)
                      .+ ..+.+.+++..|+
T Consensus       159 ~r~~~e~l~~li~~gk  174 (174)
T d1jqba2         159 GRLRAERLRDMVVYNR  174 (174)
T ss_dssp             HHHHHHHHHHHHHTTS
T ss_pred             CcccHHHHHHHHHcCC
Confidence            54 4567778887764

>d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=99.91  E-value=3.9e-26  Score=187.95  Aligned_cols=155  Identities=17%  Similarity=0.110  Sum_probs=125.6

Q ss_pred             hheeeehccCCCCC-----cceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCC----------CCCCCccCcccc
Q 018382            8 RATIGWAAKDPSGI-----LSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGM----------SNYPMVPGHEVV   72 (357)
Q Consensus         8 ~~~~~~~~~~~~~~-----~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~----------~~~p~~lG~e~~   72 (357)
                      ++++|+.+...+++     ++..++|.|+|+++|||||++++++|++|+++++|..+.          ...|.++|+|++
T Consensus         2 ~t~kA~v~~~~G~p~~~l~l~~~~~p~p~~~~~eVlVkv~a~~i~~~D~~~~~G~~~~~~~~~~~~~~~~~~~v~G~e~~   81 (175)
T d1gu7a1           2 ITAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPCGNEGL   81 (175)
T ss_dssp             EEEEEEEESSCSCHHHHCEEEEEEECTTSCCTTEEEEEEEEEEECHHHHHHHHTCSSCCCCCBSTTCCSSCBEECCSCCE
T ss_pred             ceeEEEEEccCCCcccccEEEEEECCCCCCCcCEEEEEEEEeccCcceeEEEecCcccccccccccCCCCCCcccccccc
Confidence            46777776543332     334577778889999999999999999999999987652          245678999999


Q ss_pred             EEEEEeCCCCCCCCCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCC
Q 018382           73 GEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDG  152 (357)
Q Consensus        73 G~V~~vG~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~  152 (357)
                      |+|++.|.+++.++.||+|....                                  ...|+|+||+++++++++++|++
T Consensus        82 g~V~~~~~~~~~~~~g~~v~~~~----------------------------------~~~g~~aey~~v~~~~~~~iP~~  127 (175)
T d1gu7a1          82 FEVIKVGSNVSSLEAGDWVIPSH----------------------------------VNFGTWRTHALGNDDDFIKLPNP  127 (175)
T ss_dssp             EEEEEECTTCCSCCTTCEEEESS----------------------------------SCCCCSBSEEEEEGGGEEEECCH
T ss_pred             cccccccccccccccccceeccc----------------------------------cccccccceeeehhhhccCCCcc
Confidence            99999999999999999996542                                  35789999999999999999998


Q ss_pred             CCccccccccchhhhhhhhhhc-cCCCCCCCeEEEEe-c-ChHHHHHHH
Q 018382          153 MALEQAAPLLCAGVTVFSPLSH-FGLKQSGLRGGILG-L-GGVGHMGVL  198 (357)
Q Consensus       153 l~~~~aa~~~~~~~ta~~~l~~-~~~~~~~~~VlI~G-~-g~~G~~ai~  198 (357)
                      ++.+.  ++.+..+|||+++.. ...+++|++|||+| + |++|++++|
T Consensus       128 ~~~~~--a~~~~~~ta~~~l~~~~~~~~~g~~vli~gaa~~gvG~~~iQ  174 (175)
T d1gu7a1         128 AQSKA--NGKPNGLTDAKSIETLYDGTKPLHELYQDGVANSKDGKQLIT  174 (175)
T ss_dssp             HHHHH--TTCSCCCCCCCCEEEECCSSSCHHHHHHHHHHTGGGSCEEEE
T ss_pred             chhhh--hccchHHHHHHHHHHHhcCCCCCCEEEEECccchhhhheEEe
Confidence            76444  345678899998864 45679999999997 4 779988776

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=99.91  E-value=1.4e-23  Score=171.82  Aligned_cols=162  Identities=20%  Similarity=0.306  Sum_probs=133.0

Q ss_pred             ccccccccchhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCcEEEcCC
Q 018382          155 LEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGADQYLVSS  233 (357)
Q Consensus       155 ~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~~vv~~~  233 (357)
                      +.+||.+.|++.|+|+++.+.+.+++|++|+|+|+|++|++++|+|+..|+ +|++++++++|++.+++ +|+++++|++
T Consensus         2 P~eaa~lgCa~~Ta~~a~~~~a~~~~G~~VlV~GaGgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~-lGa~~~i~~~   80 (174)
T d1p0fa2           2 PLESCLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIE-LGATECLNPK   80 (174)
T ss_dssp             CGGGGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH-TTCSEEECGG
T ss_pred             HHHHHhhhhHHHHHHHHHHHhhCCCCCCEEEEECCCchhHHHHHHHHHcCCceeeccCChHHHHHHHHH-cCCcEEEcCC
Confidence            457999999999999998887778999999999999999999999999998 79999999999999988 9999999876


Q ss_pred             Chh-----HHHHhh-CCccEEEEcCCCCCChHHHHhcccc-CCeEEEEccCCCCcccchH-HHhhccceEEEEeecC--H
Q 018382          234 DAT-----RMQEAA-DSLDYIIDTVPANHPLEPYLSLLKL-DGKLILTGVINTPMQFLTP-MVMLGRKAITGSFIGS--M  303 (357)
Q Consensus       234 ~~~-----~~~~~~-~~~d~v~d~~g~~~~~~~~~~~l~~-~G~~v~~g~~~~~~~~~~~-~~~~~~~~i~g~~~~~--~  303 (357)
                      +.+     ..+... +++|++||++|....+..++..+++ +|+++.+|.......++.. ..+.+++++.|++.++  .
T Consensus        81 ~~d~~~~~~~~~~~~~G~d~vid~~g~~~~~~~~~~~~~~~~G~~v~vG~~~~~~~~~~~~~~~~~~~~i~Gs~~G~~~~  160 (174)
T d1p0fa2          81 DYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNERLPLDPLLLLTGRSLKGSVFGGFKG  160 (174)
T ss_dssp             GCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECCCCCTTCCEEECTHHHHTTCEEEECSGGGCCG
T ss_pred             CchhHHHHHHHHhcCCCCcEEEEcCCCchHHHHHHHHHHHhcCceEEEEEecCccccccCHHHHhCCCEEEEEEeCCCCH
Confidence            532     122222 3899999999998678888888876 5999999986655555443 2345678999998653  4


Q ss_pred             HHHHHHHHHHHhcC
Q 018382          304 KETKEMLEFCREKG  317 (357)
Q Consensus       304 ~~~~~~~~~~~~~~  317 (357)
                      ++++++++++.+|+
T Consensus       161 ~d~~~lidl~~~gK  174 (174)
T d1p0fa2         161 EEVSRLVDDYMKKK  174 (174)
T ss_dssp             GGHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHcCC
Confidence            68999999998875

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=99.90  E-value=1.2e-23  Score=172.08  Aligned_cols=161  Identities=22%  Similarity=0.219  Sum_probs=136.8

Q ss_pred             CCccccccccchhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcC
Q 018382          153 MALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVS  232 (357)
Q Consensus       153 l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~  232 (357)
                      +|+++||.+ .++++||+++.+... ++|++|+|+|+|++|++++|+|+..|++|++++++++|++.+++ +|++..++.
T Consensus         1 VS~e~Aal~-ePla~a~~a~~~~~~-~~g~~vlV~G~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~-~ga~~~~~~   77 (170)
T d1e3ja2           1 VSLEEGALL-EPLSVGVHACRRAGV-QLGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKN-CGADVTLVV   77 (170)
T ss_dssp             SCHHHHHTH-HHHHHHHHHHHHHTC-CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-TTCSEEEEC
T ss_pred             CCHHHHHHH-HHHHHHHHHHHHhCC-CCCCEEEEEcccccchhhHhhHhhhcccccccchHHHHHHHHHH-cCCcEEEec
Confidence            578898855 567889999988765 99999999999999999999999999999999999999999988 999887654


Q ss_pred             CCh-----hHHHHhh----CCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCcccchHHHhhccceEEEEeecCH
Q 018382          233 SDA-----TRMQEAA----DSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSM  303 (357)
Q Consensus       233 ~~~-----~~~~~~~----~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~  303 (357)
                      +..     +..+.++    .++|+||||+|....++.++++++++|+++.+|.......++...++.+++++.|++.+. 
T Consensus        78 ~~~~~~~~~~~~~~~~~~g~g~D~vid~~g~~~~~~~a~~~~~~~G~iv~~G~~~~~~~~~~~~~~~k~i~i~gs~~~~-  156 (170)
T d1e3ja2          78 DPAKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTGGTLMLVGMGSQMVTVPLVNACAREIDIKSVFRYC-  156 (170)
T ss_dssp             CTTTSCHHHHHHHHHHHSSSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCSSCCCCCHHHHHTTTCEEEECCSCS-
T ss_pred             cccccccchhhhhhhcccccCCceeeecCCChHHHHHHHHHHhcCCceEEEecCCCCCCcCHHHHHHCCCEEEEEECCH-
Confidence            431     2222332    379999999999867899999999999999999887777788888999999999997654 


Q ss_pred             HHHHHHHHHHHhcC
Q 018382          304 KETKEMLEFCREKG  317 (357)
Q Consensus       304 ~~~~~~~~~~~~~~  317 (357)
                      ++|+++++++++|+
T Consensus       157 ~~~~~ai~li~~Gk  170 (170)
T d1e3ja2         157 NDYPIALEMVASGR  170 (170)
T ss_dssp             SCHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHcCC
Confidence            57899999999875

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=99.90  E-value=7.4e-24  Score=175.18  Aligned_cols=156  Identities=23%  Similarity=0.258  Sum_probs=130.6

Q ss_pred             ccccchhhhhhhhhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhH
Q 018382          159 APLLCAGVTVFSPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATR  237 (357)
Q Consensus       159 a~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~  237 (357)
                      ++++++++|||.+|.+...+++|++|||+|+ |++|++++|+|+..|++|+++++++++.+.+++ +|+++++++++++.
T Consensus         8 ~~lg~~glTA~~al~~~~~v~~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~-~Ga~~vi~~~~~~~   86 (182)
T d1v3va2           8 GTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQ-IGFDAAFNYKTVNS   86 (182)
T ss_dssp             TTTSHHHHHHHHHHHTTTCCCSSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-TTCSEEEETTSCSC
T ss_pred             HHHhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHHh-hhhhhhcccccccH
Confidence            4788899999999999999999999999987 899999999999999999999999999888888 99999999887654


Q ss_pred             HHH---hh--CCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCC-------CcccchHHHhhccceEEEEeecCH--
Q 018382          238 MQE---AA--DSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINT-------PMQFLTPMVMLGRKAITGSFIGSM--  303 (357)
Q Consensus       238 ~~~---~~--~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-------~~~~~~~~~~~~~~~i~g~~~~~~--  303 (357)
                      .++   ..  .++|+|||++|.+ .+..++++++++|+++.+|....       ...+....++.+++++.|++..+.  
T Consensus        87 ~~~~~~~~~~~Gvd~v~D~vG~~-~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~l~~k~~ti~g~~~~~~~~  165 (182)
T d1v3va2          87 LEEALKKASPDGYDCYFDNVGGE-FLNTVLSQMKDFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYRWQG  165 (182)
T ss_dssp             HHHHHHHHCTTCEEEEEESSCHH-HHHHHGGGEEEEEEEEECCCGGGTTCTTSCCBCCCHHHHHHTTCEEEECCGGGCCH
T ss_pred             HHHHHHHhhcCCCceeEEecCch-hhhhhhhhccCCCeEEeecceeeccccccCCCCcchHHHhhcCcEEEEEEEeccCh
Confidence            333   32  2799999999986 89999999999999999986432       123455678899999999876542  


Q ss_pred             ----HHHHHHHHHHHhc
Q 018382          304 ----KETKEMLEFCREK  316 (357)
Q Consensus       304 ----~~~~~~~~~~~~~  316 (357)
                          +.++++++|+++|
T Consensus       166 ~~~~~~~~~l~~~i~~G  182 (182)
T d1v3va2         166 DVREKALRDLMKWVLEG  182 (182)
T ss_dssp             HHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHhCc
Confidence                3467777777765

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=99.90  E-value=4e-24  Score=176.43  Aligned_cols=134  Identities=21%  Similarity=0.229  Sum_probs=116.7

Q ss_pred             CCccccccccchhhhhhhhhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEc
Q 018382          153 MALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLV  231 (357)
Q Consensus       153 l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~  231 (357)
                      +|+++||+++++++|||++|.+...+++|++|||+|+ |++|++++|+|+..|++|+++++++++.+.+++ +|+++++|
T Consensus         1 isfe~AA~~~~~~~TA~~al~~~~~l~~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~~-lGa~~vi~   79 (179)
T d1qora2           1 ISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK-AGAWQVIN   79 (179)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH-HTCSEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHHh-cCCeEEEE
Confidence            5899999999999999999999888899999999976 889999999999999999999999999999888 99999999


Q ss_pred             CCChhHHHHh---hC--CccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCc-ccchHHH
Q 018382          232 SSDATRMQEA---AD--SLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPM-QFLTPMV  288 (357)
Q Consensus       232 ~~~~~~~~~~---~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~  288 (357)
                      ++++++.+++   ++  ++|+|+|+++.. .+..++++++++|+++.++...... .++...+
T Consensus        80 ~~~~d~~~~v~~~t~g~g~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~  141 (179)
T d1qora2          80 YREEDLVERLKEITGGKKVRVVYDSVGRD-TWERSLDCLQRRGLMVSFGNSSGAVTGVNLGIL  141 (179)
T ss_dssp             TTTSCHHHHHHHHTTTCCEEEEEECSCGG-GHHHHHHTEEEEEEEEECCCTTCCCCCBCTHHH
T ss_pred             CCCCCHHHHHHHHhCCCCeEEEEeCccHH-HHHHHHHHHhcCCeeeecccccCCccccchhhh
Confidence            9887655544   33  799999999987 8999999999999999988765443 3444333

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=99.90  E-value=6.2e-24  Score=176.64  Aligned_cols=163  Identities=16%  Similarity=0.240  Sum_probs=133.8

Q ss_pred             CCccccccccchhhhhhhhhhccCCCCCCCeEEEE-ec-ChHHHHHHHHHHHcCCeEEEEeCCcHH----HHHHHHhcCC
Q 018382          153 MALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGIL-GL-GGVGHMGVLIAKAMGHHVTVISSSDKK----RVEAMEHLGA  226 (357)
Q Consensus       153 l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~-G~-g~~G~~ai~la~~~g~~V~~~~~~~~~----~~~~~~~~g~  226 (357)
                      +|++|||+++++++|||++|.+...++||++|+|+ |+ |++|++++|+||.+|++|++++++.++    .+.+++ +|+
T Consensus         1 ls~~~AA~l~~~~~TA~~~l~~~~~~~~g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~-lGa   79 (189)
T d1gu7a2           1 LTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKE-LGA   79 (189)
T ss_dssp             CCHHHHHTCTTHHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHH-HTC
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhh-ccc
Confidence            68999999999999999999998888999999997 65 999999999999999999999876554    334455 999


Q ss_pred             cEEEcCCChh------HHHHhh----CCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCC-CcccchHHHhhccceE
Q 018382          227 DQYLVSSDAT------RMQEAA----DSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINT-PMQFLTPMVMLGRKAI  295 (357)
Q Consensus       227 ~~vv~~~~~~------~~~~~~----~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i  295 (357)
                      ++++++++.+      .++++.    .++|+|||++|+. .+..++++|+++|+++.+|...+ +..++...++.+++++
T Consensus        80 d~vi~~~~~~~~~~~~~v~~~~~~~g~~vdvv~D~vg~~-~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~l~~k~~~i  158 (189)
T d1gu7a2          80 TQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGK-SSTGIARKLNNNGLMLTYGGMSFQPVTIPTSLYIFKNFTS  158 (189)
T ss_dssp             SEEEEHHHHHCGGGHHHHHHHHHHHTCCEEEEEESSCHH-HHHHHHHTSCTTCEEEECCCCSSCCEEECHHHHHHSCCEE
T ss_pred             cEEEeccccchhHHHHHHHHHHhhccCCceEEEECCCcc-hhhhhhhhhcCCcEEEEECCccCCCccCcHHHHHHCCcEE
Confidence            9999875432      123322    3799999999987 88999999999999999997654 4568888888999999


Q ss_pred             EEEeecCH---------HHHHHHHHHHHhcC
Q 018382          296 TGSFIGSM---------KETKEMLEFCREKG  317 (357)
Q Consensus       296 ~g~~~~~~---------~~~~~~~~~~~~~~  317 (357)
                      .|++...+         +.++++++++++|+
T Consensus       159 ~G~~~~~~~~~~~~~~~~~~~~l~~l~~~Gk  189 (189)
T d1gu7a2         159 AGFWVTELLKNNKELKTSTLNQIIAWYEEGK  189 (189)
T ss_dssp             EECCHHHHHTTCHHHHHHHHHHHHHHHHHTC
T ss_pred             EEEEehHhhhhCHHHHHHHHHHHHHHHHcCC
Confidence            99876432         45678888888774

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.89  E-value=6.2e-23  Score=168.74  Aligned_cols=163  Identities=17%  Similarity=0.239  Sum_probs=130.5

Q ss_pred             CccccccccchhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCcEEEcC
Q 018382          154 ALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGADQYLVS  232 (357)
Q Consensus       154 ~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~~vv~~  232 (357)
                      ++++||.++|++.|+|+++.+.+.++||++|||+|+|++|++++|+++..|+ +|+++++++++.+.+++ +|+++++|+
T Consensus         2 P~e~aa~l~ca~~Tay~al~~~~~~~~G~tVlI~GaGGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~ak~-lGa~~~i~~   80 (176)
T d2fzwa2           2 PLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKE-FGATECINP   80 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH-HTCSEEECG
T ss_pred             CHHHHhHhhcHHHHHHHHHHHhhCCCCCCEEEEecchhHHHHHHHHHHHHhcCceEEEcccHHHHHHHHH-hCCcEEEeC
Confidence            4789999999999999999888878999999999999999999999999997 78888888888888887 999999988


Q ss_pred             CCh-h----HHHHhh-CCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCC--cccchHHHhhccceEEEEeecC--
Q 018382          233 SDA-T----RMQEAA-DSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTP--MQFLTPMVMLGRKAITGSFIGS--  302 (357)
Q Consensus       233 ~~~-~----~~~~~~-~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~~~~~~~~~~~~~~i~g~~~~~--  302 (357)
                      ++. +    .++... +++|+|||++|....++.+..+++++|.++.++.....  ...+....+.+++++.|++.++  
T Consensus        81 ~~~~~~~~~~~~~~~~~g~D~vid~~G~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~Gs~~G~~~  160 (176)
T d2fzwa2          81 QDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQLVTGRTWKGTAFGGWK  160 (176)
T ss_dssp             GGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGGGCC
T ss_pred             CchhhHHHHHHHHHcCCCCcEeeecCCCHHHHHHHHHhhcCCceeEEEEeeccccccccccHHHHHCCCEEEEEeeeCCc
Confidence            652 2    222222 38999999999976788899999999888877544322  2233334455788999998765  


Q ss_pred             -HHHHHHHHHHHHhcC
Q 018382          303 -MKETKEMLEFCREKG  317 (357)
Q Consensus       303 -~~~~~~~~~~~~~~~  317 (357)
                       .+++.++++++.+|+
T Consensus       161 ~~~d~~~li~l~~~GK  176 (176)
T d2fzwa2         161 SVESVPKLVSEYMSKK  176 (176)
T ss_dssp             HHHHHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHHHcCC
Confidence             366788888888774

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=99.88  E-value=4.5e-22  Score=163.34  Aligned_cols=163  Identities=18%  Similarity=0.271  Sum_probs=133.1

Q ss_pred             CccccccccchhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCcEEEcC
Q 018382          154 ALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGADQYLVS  232 (357)
Q Consensus       154 ~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~~vv~~  232 (357)
                      ++++||.++|++.|+|+++.+.+.+++|++|+|+|+|++|++++++++..++ +|++++++++|++.+++ +|+++++|+
T Consensus         2 P~e~aa~l~ca~~Tay~a~~~~a~~k~g~~VlI~G~Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~-~GAd~~in~   80 (175)
T d1cdoa2           2 PLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKV-FGATDFVNP   80 (175)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-TTCCEEECG
T ss_pred             CHHHHHHhhcHHHHHHHHHHHhhCCCCCCEEEEEecCCccchHHHHHHHHhhchheeecchHHHHHHHHH-cCCcEEEcC
Confidence            5789999999999999999887778999999999999999999999999988 79999999999998888 999999997


Q ss_pred             CChh----HHHHhh--CCccEEEEcCCCCCChHHHHhccccCCeE-EEEccCCCCcccchHHHhhccceEEEEeecC---
Q 018382          233 SDAT----RMQEAA--DSLDYIIDTVPANHPLEPYLSLLKLDGKL-ILTGVINTPMQFLTPMVMLGRKAITGSFIGS---  302 (357)
Q Consensus       233 ~~~~----~~~~~~--~~~d~v~d~~g~~~~~~~~~~~l~~~G~~-v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~---  302 (357)
                      ++.+    .....+  .++|++||++|....++.+..+++++|.+ +..+........+....+.++.++.|++.++   
T Consensus        81 ~~~~~~~~~~~~~~~~~G~d~vid~~G~~~~~~~a~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~i~Gs~~G~~~~  160 (175)
T d1cdoa2          81 NDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLHDVATRPIQLIAGRTWKGSMFGGFKG  160 (175)
T ss_dssp             GGCSSCHHHHHHHHHTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCSSSCEEECHHHHHTTCEEEECSGGGCCH
T ss_pred             CCcchhHHHHHHhhccCCcceeeeecCCHHHHHHHHHHhhCCCcceeEEEecCCcccCccHHHHHCCcEEEEEEEeCCcH
Confidence            6532    122222  38999999999976778888888777554 4455554445566666677889999998764   


Q ss_pred             HHHHHHHHHHHHhcC
Q 018382          303 MKETKEMLEFCREKG  317 (357)
Q Consensus       303 ~~~~~~~~~~~~~~~  317 (357)
                      .++++++++++.+|+
T Consensus       161 ~~d~~~~i~l~~~gK  175 (175)
T d1cdoa2         161 KDGVPKMVKAYLDKK  175 (175)
T ss_dssp             HHHHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHHcCC
Confidence            478899999998875

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=99.88  E-value=4.4e-22  Score=163.52  Aligned_cols=163  Identities=18%  Similarity=0.269  Sum_probs=131.3

Q ss_pred             CccccccccchhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCcEEEcC
Q 018382          154 ALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGADQYLVS  232 (357)
Q Consensus       154 ~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~~vv~~  232 (357)
                      ++++||+++|++.|+|+++.+.+.+++|++|||+|+|++|++++++++..|+ +|++++++++|.+.+++ +|+++++++
T Consensus         2 Ple~aa~l~ca~~Tay~al~~~~~vk~GdtVlV~GaGG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~-~Ga~~~i~~   80 (176)
T d2jhfa2           2 PLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKE-VGATECVNP   80 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-TTCSEEECG
T ss_pred             CHHHHhHhhcHHHHHHHHHHHhhCCCCCCEEEEECCCCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHH-hCCeeEEec
Confidence            5789999999999999999888888999999999999999999999999997 89999999999988888 999999887


Q ss_pred             CCh-hH----HHHhh-CCccEEEEcCCCCCChHHHHhccccCCeEEEEccC-CCCc-ccchHHHhhccceEEEEeecC--
Q 018382          233 SDA-TR----MQEAA-DSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVI-NTPM-QFLTPMVMLGRKAITGSFIGS--  302 (357)
Q Consensus       233 ~~~-~~----~~~~~-~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~-~~~~-~~~~~~~~~~~~~i~g~~~~~--  302 (357)
                      ++. +.    .+... +++|++||++|....++.++..++++|..+.++.. .... .+....++.+++++.|++.++  
T Consensus        81 ~~~~~~~~~~~~~~~~~G~D~vid~~G~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~Gs~~G~~~  160 (176)
T d2jhfa2          81 QDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGAIFGGFK  160 (176)
T ss_dssp             GGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHHBCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGGGCC
T ss_pred             CCchhHHHHHHHHHhcCCCCEEEecCCchhHHHHHHHHHhcCCcceEEecCCCCcccccccHHHHhCCCEEEEEEEeCCC
Confidence            542 21    22222 38999999999986778899999987655555443 3332 233445667899999998765  


Q ss_pred             -HHHHHHHHHHHHhcC
Q 018382          303 -MKETKEMLEFCREKG  317 (357)
Q Consensus       303 -~~~~~~~~~~~~~~~  317 (357)
                       .++++++++++.+|+
T Consensus       161 ~~~~~~~li~~~~~GK  176 (176)
T d2jhfa2         161 SKDSVPKLVADFMAKK  176 (176)
T ss_dssp             HHHHHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHHHCcC
Confidence             577888888888774

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.88  E-value=2.1e-22  Score=164.94  Aligned_cols=158  Identities=18%  Similarity=0.318  Sum_probs=128.1

Q ss_pred             CccccccccchhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCcEEEcC
Q 018382          154 ALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGADQYLVS  232 (357)
Q Consensus       154 ~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~~vv~~  232 (357)
                      ++++||.++|++.|+|+++.+...+++|++|+|+|+|++|++++|+++..|+ +|++++.+++|++.+++ +|+++++|+
T Consensus         3 P~e~aa~l~Ca~~T~~~Av~~~~~~~~g~tVlI~G~GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~-~GA~~~in~   81 (176)
T d1d1ta2           3 PPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMA-VGATECISP   81 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-HTCSEEECG
T ss_pred             CHHHHHhhhhHHHHHHHHHHHhhCCCCCCEEEEECCCchhHHHHHHHHHcCCceEEEecCcHHHHHHHHh-cCCcEEECc
Confidence            5899999999999999999887777999999999999999999999999997 89999999999999988 999999987


Q ss_pred             CChhH----HHHhh--CCccEEEEcCCCCCChHHHHhccccC-CeEEEEccCCCCcc--cchHHHhhccceEEEEeecCH
Q 018382          233 SDATR----MQEAA--DSLDYIIDTVPANHPLEPYLSLLKLD-GKLILTGVINTPMQ--FLTPMVMLGRKAITGSFIGSM  303 (357)
Q Consensus       233 ~~~~~----~~~~~--~~~d~v~d~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~--~~~~~~~~~~~~i~g~~~~~~  303 (357)
                      ++.+.    +.+++  .++|++||++|....+..+...+.++ |+++.+|.......  ++... +.++.++.|++.++.
T Consensus        82 ~~~~~~~~~~~~~~~g~G~d~vi~~~g~~~~~~~a~~~~~~~~G~~v~vG~~~~~~~~~~~~~~-~~~~~~i~Gs~~G~~  160 (176)
T d1d1ta2          82 KDSTKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSAKMLTYDPML-LFTGRTWKGCVFGGL  160 (176)
T ss_dssp             GGCSSCHHHHHHHHHTSCCCEEEECSCCHHHHHHHHTTSCTTTCEEEECSCCCTTCCEEECTHH-HHTTCEEEECSGGGC
T ss_pred             cccchHHHHHHHHhccccceEEEEeCCchHHHHHHHHHhhcCCeEEEEEEccccccccCCCHHH-HhCCCEEEEEEEeCC
Confidence            76432    22222  38999999999986677777777655 99999998765544  33333 446789999997653


Q ss_pred             ---HHHHHHHHHH
Q 018382          304 ---KETKEMLEFC  313 (357)
Q Consensus       304 ---~~~~~~~~~~  313 (357)
                         +++.++++++
T Consensus       161 ~~~~dip~li~~~  173 (176)
T d1d1ta2         161 KSRDDVPKLVTEF  173 (176)
T ss_dssp             CHHHHHHHHHHHH
T ss_pred             CcHHHHHHHHHHH
Confidence               5666666554

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.87  E-value=8.2e-23  Score=166.99  Aligned_cols=156  Identities=18%  Similarity=0.197  Sum_probs=128.9

Q ss_pred             CCccccccccchhhhhhhhh---hccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcE
Q 018382          153 MALEQAAPLLCAGVTVFSPL---SHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQ  228 (357)
Q Consensus       153 l~~~~aa~~~~~~~ta~~~l---~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~  228 (357)
                      +|+.|||+++++++|||.++   .+.+...++++|||+|+ |++|.+++|+||.+|++|+++++++++.+.+++ +|+++
T Consensus         1 l~~~~Aa~lg~aGlTA~~a~~~l~~~g~~~~~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~~~-lGad~   79 (177)
T d1o89a2           1 LDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLKS-LGASR   79 (177)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHH-HTEEE
T ss_pred             CCHHHHHHcccHHHHHHHHHHHHHHhCCCCCCCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHHHh-hcccc
Confidence            57899999999999999775   44555456679999976 999999999999999999999999999988887 99999


Q ss_pred             EEcCCChhHHHHhhC-CccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCC-cccchHHHhhccceEEEEee--cCHH
Q 018382          229 YLVSSDATRMQEAAD-SLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTP-MQFLTPMVMLGRKAITGSFI--GSMK  304 (357)
Q Consensus       229 vv~~~~~~~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~--~~~~  304 (357)
                      ++|+++.+..+.+.. ..|.++|++++. .+...+++++++|+++.+|...+. ..++...++.+++++.|+..  .+.+
T Consensus        80 vi~~~~~~~~~~l~~~~~~~vvD~Vgg~-~~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~k~~~i~G~~~~~~~~~  158 (177)
T d1o89a2          80 VLPRDEFAESRPLEKQVWAGAIDTVGDK-VLAKVLAQMNYGGCVAACGLAGGFTLPTTVMPFILRNVRLQGVDSVMTPPE  158 (177)
T ss_dssp             EEEGGGSSSCCSSCCCCEEEEEESSCHH-HHHHHHHTEEEEEEEEECCCTTCSCCCCCSHHHHHHCCEEEECCSSSCCHH
T ss_pred             ccccccHHHHHHHHhhcCCeeEEEcchH-HHHHHHHHhccccceEeecccCCccccccHHHHHHCCCeEEEEecccCCHH
Confidence            999887655444443 689999999998 899999999999999999987653 55777788899999999754  3444


Q ss_pred             HHHHHH
Q 018382          305 ETKEML  310 (357)
Q Consensus       305 ~~~~~~  310 (357)
                      +..+++
T Consensus       159 ~~~~~~  164 (177)
T d1o89a2         159 RRAQAW  164 (177)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            443333

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.87  E-value=3.2e-22  Score=165.79  Aligned_cols=164  Identities=15%  Similarity=0.161  Sum_probs=124.8

Q ss_pred             CCCccccccccchhhhhhhhhhccCCCCCC--CeEEEEec-ChHHHHHHHHHHHcCCe-EEEEeCCcHHHHHHHHhcCCc
Q 018382          152 GMALEQAAPLLCAGVTVFSPLSHFGLKQSG--LRGGILGL-GGVGHMGVLIAKAMGHH-VTVISSSDKKRVEAMEHLGAD  227 (357)
Q Consensus       152 ~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~--~~VlI~G~-g~~G~~ai~la~~~g~~-V~~~~~~~~~~~~~~~~~g~~  227 (357)
                      ++|+...| ++.+++|||.+|+....+++|  ++|||+|+ |++|++++|+||..|++ |+++++++++..++.+.+|++
T Consensus         1 ~~~~~~ga-lg~~glTA~~~l~~~~~~~~G~~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~gad   79 (187)
T d1vj1a2           1 HLSYFLGA-IGMPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFD   79 (187)
T ss_dssp             CGGGGGTT-TSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCCS
T ss_pred             CccHHHHH-hhcHHHHHHHHHHHHhCCCCCCCCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccce
Confidence            35666654 788899999999999888887  88999986 99999999999999995 566677777777777669999


Q ss_pred             EEEcCCChhHHHHhh----CCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCC---c----c---cchHHHhhccc
Q 018382          228 QYLVSSDATRMQEAA----DSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTP---M----Q---FLTPMVMLGRK  293 (357)
Q Consensus       228 ~vv~~~~~~~~~~~~----~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~---~----~---~~~~~~~~~~~  293 (357)
                      +++|+++++..+.+.    .++|+|||++|+. .++.++++++++|+++.+|..++.   .    .   .....+..+++
T Consensus        80 ~vi~~~~~~~~~~~~~~~~~GvDvv~D~vGg~-~~~~~~~~l~~~G~iv~~G~~s~~~~~~~~~~~~~~~~~~~~~~k~i  158 (187)
T d1vj1a2          80 AAVNYKTGNVAEQLREACPGGVDVYFDNVGGD-ISNTVISQMNENSHIILCGQISQYNKDVPYPPPLPPAVEAIRKERNI  158 (187)
T ss_dssp             EEEETTSSCHHHHHHHHCTTCEEEEEESSCHH-HHHHHHTTEEEEEEEEEC------------CCCCCHHHHHHHHHTTC
T ss_pred             EEeeccchhHHHHHHHHhccCceEEEecCCch-hHHHHhhhccccccEEEeccccccccccccCCchHHHHHHHHHhcce
Confidence            999999866544443    3899999999987 899999999999999999864321   1    1   11223567888


Q ss_pred             eEEEEeecC-----HHHHHHHHHHHHhcC
Q 018382          294 AITGSFIGS-----MKETKEMLEFCREKG  317 (357)
Q Consensus       294 ~i~g~~~~~-----~~~~~~~~~~~~~~~  317 (357)
                      ++.++...+     .+.++++.+|+++|+
T Consensus       159 ~~~g~~~~~~~~~~~e~~~~l~~~i~~Gk  187 (187)
T d1vj1a2         159 TRERFTVLNYKDKFEPGILQLSQWFKEGK  187 (187)
T ss_dssp             EEEECCGGGCGGGHHHHHHHHHHHHHHTS
T ss_pred             EEEEeEecchHHHHHHHHHHHHHHHHCcC
Confidence            888876532     244677778888774

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=99.83  E-value=2.1e-20  Score=155.32  Aligned_cols=160  Identities=16%  Similarity=0.103  Sum_probs=128.1

Q ss_pred             cccccccchhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCcEEEcCCC
Q 018382          156 EQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGADQYLVSSD  234 (357)
Q Consensus       156 ~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~~vv~~~~  234 (357)
                      ++.++++..+.|||++++.+ .+++|++|||+|+|++|++++++++..|+ +|++++++++|++.+++ +|+++++++.+
T Consensus         2 ~d~~~l~d~~~ta~~a~~~a-~v~~G~tVlV~GaG~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~-~Ga~~~~~~~~   79 (195)
T d1kola2           2 RDLTCLSDILPTGYHGAVTA-GVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKA-QGFEIADLSLD   79 (195)
T ss_dssp             HHHGGGGTHHHHHHHHHHHT-TCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH-TTCEEEETTSS
T ss_pred             chHHhcccHHHHHHHHHHHh-CCCCCCEEEEECcCHHHHHHHHHHHhhcccceeeecccchhhHhhhh-ccccEEEeCCC
Confidence            45678899999999999875 45999999999999999999999999998 89999999999988888 99999998877


Q ss_pred             hhH---HHHhhC--CccEEEEcCCCC---------------CChHHHHhccccCCeEEEEccCCCC-------------c
Q 018382          235 ATR---MQEAAD--SLDYIIDTVPAN---------------HPLEPYLSLLKLDGKLILTGVINTP-------------M  281 (357)
Q Consensus       235 ~~~---~~~~~~--~~d~v~d~~g~~---------------~~~~~~~~~l~~~G~~v~~g~~~~~-------------~  281 (357)
                      .+.   +.++++  ++|++||++|..               ..++.++++++++|+++.+|.....             .
T Consensus        80 ~~~~~~i~~~t~g~g~D~vid~vG~~~~~~~~~~~~~~~~~~~l~~~~~~~r~gG~v~~~G~~~~~~~~~~~~~~~~~~~  159 (195)
T d1kola2          80 TPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGLYVTEDPGAVDAAAKIGSL  159 (195)
T ss_dssp             SCHHHHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSCCCSCCTTCSSHHHHTTCC
T ss_pred             cCHHHHHHHHhCCCCcEEEEECccccccCCcccceeecCcHHHHHHHHHHHhcCCEEEEeeecCCCcccchhhhhhcCce
Confidence            544   334443  799999999843               3688999999999999999875321             2


Q ss_pred             ccchHHHhhccceEEEEeecCHHHHHHHHHHHHhcC
Q 018382          282 QFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKG  317 (357)
Q Consensus       282 ~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~  317 (357)
                      .++...++.+++++.+......+.++++++++.+++
T Consensus       160 ~~~~~~~~~k~~~i~~g~~~v~~~~~~Ll~~I~~~k  195 (195)
T d1kola2         160 SIRFGLGWAKSHSFHTGQTPVMKYNRALMQAIMWDR  195 (195)
T ss_dssp             CCCHHHHHHTTCEEEESSCCHHHHHHHHHHHHHTTS
T ss_pred             eeeHHHHHhhcceeccCCCchHHHHHHHHHHHHcCC
Confidence            344455677888876544444455788888887653

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=99.83  E-value=3.7e-21  Score=155.53  Aligned_cols=155  Identities=19%  Similarity=0.215  Sum_probs=121.5

Q ss_pred             chhhhhhhh---hhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhH-
Q 018382          163 CAGVTVFSP---LSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATR-  237 (357)
Q Consensus       163 ~~~~ta~~~---l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~-  237 (357)
                      ++++|||.+   |.+.+...++++|||+|+ |++|.+++|+||.+|++|+++++++++.+.+++ +|+++++++++... 
T Consensus         3 ~aGlTA~~a~~~L~~~g~~~~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~~~-lGad~vi~~~~~~~~   81 (167)
T d1tt7a2           3 TAGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQ-LGASEVISREDVYDG   81 (167)
T ss_dssp             HHHHHHHHHHHHHHHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHH-HTCSEEEEHHHHCSS
T ss_pred             ChHHHHHHHHHHHHHhcCCCCCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHHHh-hcccceEeccchhch
Confidence            456677754   566666577889999986 999999999999999999999999999999988 99999988654211 


Q ss_pred             -HHHh-hCCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCC-cccchHHHhhccceEEEEeec--CHHHHHHHHHH
Q 018382          238 -MQEA-ADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTP-MQFLTPMVMLGRKAITGSFIG--SMKETKEMLEF  312 (357)
Q Consensus       238 -~~~~-~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~--~~~~~~~~~~~  312 (357)
                       .+.. .+++|+|||++|+. .+..++++|+++|+++.+|...+. ..++...++.++++++|....  +.+....+.+.
T Consensus        82 ~~~~~~~~gvd~vid~vgg~-~~~~~~~~l~~~G~iv~~G~~~g~~~~~~~~~l~~k~~~i~G~~~~~~~~~~~~~~~~~  160 (167)
T d1tt7a2          82 TLKALSKQQWQGAVDPVGGK-QLASLLSKIQYGGSVAVSGLTGGGEVPATVYPFILRGVSLLGIDSVYCPMDVRAAVWER  160 (167)
T ss_dssp             CCCSSCCCCEEEEEESCCTH-HHHHHHTTEEEEEEEEECCCSSCSCEEECSHHHHTSCCEEEECCSSSCCHHHHHHHHHH
T ss_pred             hhhcccCCCceEEEecCcHH-HHHHHHHHhccCceEEEeeccCCCcccCCHHHHHHCCcEEEEEecCCCCHHHHHHHHHH
Confidence             1111 23899999999998 899999999999999999987764 567888899999999996543  34555555554


Q ss_pred             HHhcCCCc
Q 018382          313 CREKGVTS  320 (357)
Q Consensus       313 ~~~~~l~~  320 (357)
                      +. +.|+|
T Consensus       161 l~-~~L~P  167 (167)
T d1tt7a2         161 MS-SDLKP  167 (167)
T ss_dssp             TT-TTSCC
T ss_pred             HH-hcCCC
Confidence            43 34543

>d1v3va1 b.35.1.2 (A:1-112,A:295-329) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=99.63  E-value=1.8e-15  Score=118.48  Aligned_cols=133  Identities=17%  Similarity=0.102  Sum_probs=97.4

Q ss_pred             hheeeehccCCC------CCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCC
Q 018382            8 RATIGWAAKDPS------GILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSE   81 (357)
Q Consensus         8 ~~~~~~~~~~~~------~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~   81 (357)
                      ++.++|.+...|      ..|++++.++|+|++||||||+++.+++|.......    ..+...++..+.+|+|++  ++
T Consensus         2 ~~~k~~vl~~~P~G~P~~~~f~l~e~~ip~~~~gevLvk~~~~svDp~~R~~~~----~~~~g~~~~g~~vg~Vv~--S~   75 (147)
T d1v3va1           2 VKAKSWTLKKHFQGKPTQSDFELKTVELPPLKNGEVLLEALFLSVDPYMRIASK----RLKEGAVMMGQQVARVVE--SK   75 (147)
T ss_dssp             CEEEEEEESSCCCSSCCGGGEEEEEEECCCCCTTCEEEEEEEEECCTHHHHHGG----GSCTTSBCCCCEEEEEEE--ES
T ss_pred             cccEEEEEccCCCCCCcccceEEEEEECCCCCCCEEEEEEEEEeEccccccccc----ccccCCccccceEEEEEE--eC
Confidence            355666653322      238899999999999999999999999986443221    223344566688999988  67


Q ss_pred             CCCCCCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCC-----cc
Q 018382           82 VSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMA-----LE  156 (357)
Q Consensus        82 v~~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~-----~~  156 (357)
                      +++|++||+|+                                      ..++|+||.+++++.+.++|+.++     ..
T Consensus        76 ~~~f~~GD~V~--------------------------------------g~~gw~ey~v~~~~~l~kv~~~~~~~~~~~~  117 (147)
T d1v3va1          76 NSAFPAGSIVL--------------------------------------AQSGWTTHFISDGKGLEKLLTEWPDKKIQYH  117 (147)
T ss_dssp             CTTSCTTCEEE--------------------------------------ECCCSBSEEEECSSSCEECCTTCCTTSSCCC
T ss_pred             CCcccCCCEEE--------------------------------------EccCCEeEEEeccceeeEccccccccccchh
Confidence            78999999996                                      247899999999999999987643     33


Q ss_pred             ccccccchhhhh-hhhhhccCCCCCCCeEEE
Q 018382          157 QAAPLLCAGVTV-FSPLSHFGLKQSGLRGGI  186 (357)
Q Consensus       157 ~aa~~~~~~~ta-~~~l~~~~~~~~~~~VlI  186 (357)
                      ..+++....+|| |..|....  +.|++||+
T Consensus       118 ~~~~lG~~Gmtaay~gl~~~~--k~Getvv~  146 (147)
T d1v3va1         118 EHVTKGFENMPAAFIEMLNGA--NLGKAVVT  146 (147)
T ss_dssp             EEEEECGGGHHHHHHHHHTTC--CSSEEEEE
T ss_pred             hhHhccccchHHHHHHhhCCC--CCCCEEEe
Confidence            455677777774 54564443  67999986

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.47  E-value=1.4e-14  Score=99.40  Aligned_cols=73  Identities=23%  Similarity=0.308  Sum_probs=65.4

Q ss_pred             CCccccccccchhhhhhhhhh---ccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCC
Q 018382          153 MALEQAAPLLCAGVTVFSPLS---HFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGA  226 (357)
Q Consensus       153 l~~~~aa~~~~~~~ta~~~l~---~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~  226 (357)
                      +|++||++++++++|||.+++   +....+++++|||+|+ |++|.+++|+++..|++|+++++++++.+++++ +|+
T Consensus         1 ls~~eAa~lg~aGlTA~~al~~~~~~~~~~~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~~~-lGA   77 (77)
T d1o8ca2           1 LDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLKS-LGA   77 (77)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHH-HTE
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHHhhhhccCCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHHHH-CCC
Confidence            588999999999999998764   4555589999999976 999999999999999999999999999999888 874

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=98.54  E-value=3.3e-07  Score=71.37  Aligned_cols=99  Identities=17%  Similarity=0.189  Sum_probs=78.6

Q ss_pred             CCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCC---C-
Q 018382          180 SGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPA---N-  255 (357)
Q Consensus       180 ~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~---~-  255 (357)
                      +.-+|+|+|+|..|+.+++.|+.+|++|++.+.+.+++++++..++........+.+.+++.....|+||.++=-   . 
T Consensus        31 ~pa~V~ViGaGvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~~aDivI~aalipG~~a  110 (168)
T d1pjca1          31 KPGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELLYSNSAEIETAVAEADLLIGAVLVPGRRA  110 (168)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEEECCHHHHHHHHHTCSEEEECCCCTTSSC
T ss_pred             CCcEEEEECCChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhcccceeehhhhhhHHHhhccCcEEEEeeecCCccc
Confidence            346899999999999999999999999999999999999998877743333344445556666689999998632   1 


Q ss_pred             --CChHHHHhccccCCeEEEEccCC
Q 018382          256 --HPLEPYLSLLKLDGKLILTGVIN  278 (357)
Q Consensus       256 --~~~~~~~~~l~~~G~~v~~g~~~  278 (357)
                        -..+..++.|++++.+|++....
T Consensus       111 P~lIt~~mv~~Mk~GSVIVDvaidq  135 (168)
T d1pjca1         111 PILVPASLVEQMRTGSVIVDVAVDQ  135 (168)
T ss_dssp             CCCBCHHHHTTSCTTCEEEETTCTT
T ss_pred             CeeecHHHHhhcCCCcEEEEeecCC
Confidence              13468999999999999997644

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=98.25  E-value=3.2e-06  Score=68.31  Aligned_cols=84  Identities=15%  Similarity=0.162  Sum_probs=67.3

Q ss_pred             hhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcC-----CcEEEcCCChhHHHHhhCC
Q 018382          171 PLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLG-----ADQYLVSSDATRMQEAADS  244 (357)
Q Consensus       171 ~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g-----~~~vv~~~~~~~~~~~~~~  244 (357)
                      ..+..+.--+|+++||+|+ |++|.++++.+...|++|+++++++++.+.+.+.+.     ....+|..+.+.+++..++
T Consensus        13 ~~~~~~~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~   92 (191)
T d1luaa1          13 VVKAAGGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKG   92 (191)
T ss_dssp             HHHHTTSCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTT
T ss_pred             HHHHcCCCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhccchhhhhhhcccHHHHHHHhcC
Confidence            3344444358999999987 999999999999999999999999988776665443     2445677777778888889


Q ss_pred             ccEEEEcCCC
Q 018382          245 LDYIIDTVPA  254 (357)
Q Consensus       245 ~d~v~d~~g~  254 (357)
                      +|++|+++|.
T Consensus        93 iDilin~Ag~  102 (191)
T d1luaa1          93 AHFVFTAGAI  102 (191)
T ss_dssp             CSEEEECCCT
T ss_pred             cCeeeecCcc
Confidence            9999999875

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=98.24  E-value=4.5e-06  Score=65.76  Aligned_cols=97  Identities=19%  Similarity=0.143  Sum_probs=72.2

Q ss_pred             CCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEE-cCCC----------------------hhH
Q 018382          181 GLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYL-VSSD----------------------ATR  237 (357)
Q Consensus       181 ~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv-~~~~----------------------~~~  237 (357)
                      .-+|+|+|+|.+|+.+++.|+.+|++|.+.+.+.++++++++ ++...+. +...                      .+.
T Consensus        29 pa~VvViGaGvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~-l~~~~i~~~~~~~~~~~~~~gyA~~~s~~~~~~~~~~  107 (183)
T d1l7da1          29 PARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQVES-LGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAEA  107 (183)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHH-TTCEECCC-----------------------CCHHHH
T ss_pred             CcEEEEEcCcHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHH-hhcceEEEeccccccccccccchhhcCHHHHHHHHHH
Confidence            457999999999999999999999999999999999999998 6654331 0000                      111


Q ss_pred             HHHhhCCccEEEEcCCC---C---CChHHHHhccccCCeEEEEccCC
Q 018382          238 MQEAADSLDYIIDTVPA---N---HPLEPYLSLLKLDGKLILTGVIN  278 (357)
Q Consensus       238 ~~~~~~~~d~v~d~~g~---~---~~~~~~~~~l~~~G~~v~~g~~~  278 (357)
                      +.+.....|+||-++--   .   -.-+...+.|++++.+|++....
T Consensus       108 l~~~l~~aDlVI~talipG~~aP~lit~~mv~~Mk~GSVIVDvaidq  154 (183)
T d1l7da1         108 VLKELVKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAVEA  154 (183)
T ss_dssp             HHHHHTTCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTGGG
T ss_pred             HHHHHHhhhhheeeeecCCcccceeehHHHHHhcCCCcEEEEEeecC
Confidence            22223479999987622   1   13468999999999999997643

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=98.00  E-value=1.1e-05  Score=67.65  Aligned_cols=97  Identities=18%  Similarity=0.257  Sum_probs=71.8

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCc---EEEcCCChhHHHHh-------hCCccEE
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGAD---QYLVSSDATRMQEA-------ADSLDYI  248 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~~-------~~~~d~v  248 (357)
                      +|+++||+|+ +++|.+.++.+...|++|+++++++++.+.+.++++..   ...|..+++.++++       .+++|++
T Consensus         3 ~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDil   82 (243)
T d1q7ba_           3 EGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEVDIL   82 (243)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHTCSCSEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCCcEEEEEecCHHHhhhhhhhhhcccCCccee
Confidence            5789999987 99999999999999999999999999988888777743   23566665443332       2379999


Q ss_pred             EEcCCCC-------------------------CChHHHHhccc--cCCeEEEEcc
Q 018382          249 IDTVPAN-------------------------HPLEPYLSLLK--LDGKLILTGV  276 (357)
Q Consensus       249 ~d~~g~~-------------------------~~~~~~~~~l~--~~G~~v~~g~  276 (357)
                      ++++|..                         ...+.++..|.  .+|+++.++.
T Consensus        83 VnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS  137 (243)
T d1q7ba_          83 VNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGS  137 (243)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC
T ss_pred             hhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecc
Confidence            9998764                         12333444553  4689998875

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.92  E-value=2.5e-05  Score=65.38  Aligned_cols=77  Identities=17%  Similarity=0.188  Sum_probs=63.0

Q ss_pred             CCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCc--EEEcCCChhHHHHhhC---CccEEEEcC
Q 018382          179 QSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGAD--QYLVSSDATRMQEAAD---SLDYIIDTV  252 (357)
Q Consensus       179 ~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~--~vv~~~~~~~~~~~~~---~~d~v~d~~  252 (357)
                      -+|+++||+|+ +++|.+.++.+...|++|+++++++++.+.+.++++..  ..+|..+++.++++.+   ++|++++++
T Consensus         5 L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~g~iDilVnnA   84 (244)
T d1pr9a_           5 LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNNA   84 (244)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEECC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHhCCceEEEecc
Confidence            37899999987 99999999999999999999999999988887767643  3457777766666543   799999998


Q ss_pred             CCC
Q 018382          253 PAN  255 (357)
Q Consensus       253 g~~  255 (357)
                      |..
T Consensus        85 g~~   87 (244)
T d1pr9a_          85 AVA   87 (244)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            764

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=97.90  E-value=3.2e-05  Score=65.10  Aligned_cols=98  Identities=15%  Similarity=0.167  Sum_probs=72.1

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEE---cCCChhHHHHh-------hCCccEE
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYL---VSSDATRMQEA-------ADSLDYI  248 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv---~~~~~~~~~~~-------~~~~d~v  248 (357)
                      +|+++||+|+ +++|.+.++.+...|++|+++++++++.+.+.++++.....   |..+.+.++++       .+++|++
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iDil   84 (253)
T d1hxha_           5 QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVL   84 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHhCCCCeE
Confidence            6889999986 99999999999999999999999999988888878854432   44444333322       2479999


Q ss_pred             EEcCCCC-------------------------CChHHHHhccc-cCCeEEEEccC
Q 018382          249 IDTVPAN-------------------------HPLEPYLSLLK-LDGKLILTGVI  277 (357)
Q Consensus       249 ~d~~g~~-------------------------~~~~~~~~~l~-~~G~~v~~g~~  277 (357)
                      ++++|..                         ...+.++..|+ .+|+++.++..
T Consensus        85 VnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~  139 (253)
T d1hxha_          85 VNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASV  139 (253)
T ss_dssp             EECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCG
T ss_pred             EecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccch
Confidence            9999864                         12233444554 57899988754

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.87  E-value=3.6e-05  Score=64.34  Aligned_cols=76  Identities=20%  Similarity=0.258  Sum_probs=61.5

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCc--EEEcCCChhHHHHhhC---CccEEEEcCC
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGAD--QYLVSSDATRMQEAAD---SLDYIIDTVP  253 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~--~vv~~~~~~~~~~~~~---~~d~v~d~~g  253 (357)
                      +|+++||+|+ +++|.+.++.+...|++|+++++++++.+.+.++++..  ..+|..+++.+++..+   ++|++++++|
T Consensus         4 ~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDilVnnAg   83 (242)
T d1cyda_           4 SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNNAA   83 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEECCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHcCCCeEEEECCc
Confidence            5899999987 99999999999999999999999999888877767632  3356667666665543   7999999987


Q ss_pred             CC
Q 018382          254 AN  255 (357)
Q Consensus       254 ~~  255 (357)
                      ..
T Consensus        84 ~~   85 (242)
T d1cyda_          84 LV   85 (242)
T ss_dssp             CC
T ss_pred             cc
Confidence            63

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.86  E-value=3.2e-05  Score=64.62  Aligned_cols=76  Identities=17%  Similarity=0.200  Sum_probs=61.1

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcE-EEcCCChhHHHHh-------hCCccEEEE
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQ-YLVSSDATRMQEA-------ADSLDYIID  250 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~-------~~~~d~v~d  250 (357)
                      +|+++||+|+ +++|.+.++.+...|++|+++++++++.+.+.+.+++.. ..|..+++.++++       .+++|++++
T Consensus         4 ~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVn   83 (242)
T d1ulsa_           4 KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVVH   83 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHhcCCceEEEE
Confidence            5789999987 999999999999999999999999999988888777543 3566665544433       237999999


Q ss_pred             cCCCC
Q 018382          251 TVPAN  255 (357)
Q Consensus       251 ~~g~~  255 (357)
                      ++|..
T Consensus        84 nAG~~   88 (242)
T d1ulsa_          84 YAGIT   88 (242)
T ss_dssp             CCCCC
T ss_pred             CCccc
Confidence            98764

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=97.85  E-value=5.1e-05  Score=63.62  Aligned_cols=76  Identities=13%  Similarity=0.094  Sum_probs=58.2

Q ss_pred             CCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcE-EEcCCChhHHHHh-------hCCccEEE
Q 018382          179 QSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQ-YLVSSDATRMQEA-------ADSLDYII  249 (357)
Q Consensus       179 ~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~-------~~~~d~v~  249 (357)
                      -+|+++||+|+ +++|.+.++.+...|++|++..+++++.+...+ .+... .+|..+.+.++++       .+++|+++
T Consensus         3 l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLV   81 (248)
T d2d1ya1           3 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEA-IGGAFFQVDLEDERERVRFVEEAAYALGRVDVLV   81 (248)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHHHHHH-HTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-cCCeEEEEeCCCHHHHHHHHHHHHHhcCCCCeEE
Confidence            36899999987 999999999999999999999999887665555 67543 3566665443332       24799999


Q ss_pred             EcCCCC
Q 018382          250 DTVPAN  255 (357)
Q Consensus       250 d~~g~~  255 (357)
                      +++|..
T Consensus        82 nnAG~~   87 (248)
T d2d1ya1          82 NNAAIA   87 (248)
T ss_dssp             ECCCCC
T ss_pred             EeCcCC
Confidence            998763

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.81  E-value=4.5e-05  Score=59.25  Aligned_cols=74  Identities=18%  Similarity=0.206  Sum_probs=58.9

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCC
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANH  256 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~  256 (357)
                      -.+.+|||+|+|.+|.++++.+...|+ +++++.|+.++.+.+.+++|.. .++..   .+.+....+|+||.|++...
T Consensus        22 l~~~~ilviGaG~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~~-~~~~~---~~~~~l~~~Divi~atss~~   96 (159)
T d1gpja2          22 LHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGE-AVRFD---ELVDHLARSDVVVSATAAPH   96 (159)
T ss_dssp             CTTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCE-ECCGG---GHHHHHHTCSEEEECCSSSS
T ss_pred             cccCeEEEECCCHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhcc-cccch---hHHHHhccCCEEEEecCCCC
Confidence            578899999999999999999999998 7999999988888777778854 33332   23344458999999998753

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.77  E-value=4.4e-05  Score=63.85  Aligned_cols=77  Identities=17%  Similarity=0.131  Sum_probs=60.5

Q ss_pred             CCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcE---EEcCCChhHHHHh-------hCCccE
Q 018382          179 QSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQ---YLVSSDATRMQEA-------ADSLDY  247 (357)
Q Consensus       179 ~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~-------~~~~d~  247 (357)
                      -+|+++||+|+ +++|.+.++.+...|++|+++++++++.+.+.++++...   ..|..+++.++++       .+++|+
T Consensus         4 L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~idi   83 (244)
T d1nffa_           4 LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHV   83 (244)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhCcceEEEeecCCHHHHHHHHHHHHHHhCCCeE
Confidence            36899999987 999999999999999999999999999888887787432   2456665443332       237999


Q ss_pred             EEEcCCCC
Q 018382          248 IIDTVPAN  255 (357)
Q Consensus       248 v~d~~g~~  255 (357)
                      +++++|..
T Consensus        84 linnAG~~   91 (244)
T d1nffa_          84 LVNNAGIL   91 (244)
T ss_dssp             EEECCCCC
T ss_pred             EEECCccc
Confidence            99998874

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.75  E-value=5.7e-05  Score=63.40  Aligned_cols=75  Identities=13%  Similarity=0.123  Sum_probs=59.5

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcE--EEcCCChhHHHHhh-------CCccEEE
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQ--YLVSSDATRMQEAA-------DSLDYII  249 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~--vv~~~~~~~~~~~~-------~~~d~v~  249 (357)
                      +|+++||+|+ +++|.+.++.+...|++|+++++++++.+.+.++++...  ..|..+++.++++.       +++|+++
T Consensus         5 ~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDilV   84 (250)
T d1ydea1           5 AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVV   84 (250)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEccCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence            6899999987 999999999999999999999999999888888676432  34666655444332       3799999


Q ss_pred             EcCCC
Q 018382          250 DTVPA  254 (357)
Q Consensus       250 d~~g~  254 (357)
                      +++|.
T Consensus        85 nnAG~   89 (250)
T d1ydea1          85 NNAGH   89 (250)
T ss_dssp             ECCCC
T ss_pred             ecccc
Confidence            99874

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=97.75  E-value=4.8e-05  Score=59.66  Aligned_cols=100  Identities=11%  Similarity=0.081  Sum_probs=69.0

Q ss_pred             hhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEE
Q 018382          170 SPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYI  248 (357)
Q Consensus       170 ~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v  248 (357)
                      .+|++... .++++|||+|+|+.+.+++..++..|+ +++++.|+.++.+.+.+.++...+-...        ...+|++
T Consensus         7 ~~l~~~~~-~~~~~vlIlGaGGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~~~~~~~~~~--------~~~~Dli   77 (167)
T d1npya1           7 KLIEKYHL-NKNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAYINSLE--------NQQADIL   77 (167)
T ss_dssp             HHHHHTTC-CTTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEEESCCT--------TCCCSEE
T ss_pred             HHHHHcCC-CCCCeEEEECCCHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhhhhhhhhccc--------ccchhhh
Confidence            34555555 578899999999999999999999998 8999999999988888877765432111        1368999


Q ss_pred             EEcCCCCC-----C--hHHHHhccccCCeEEEEccCC
Q 018382          249 IDTVPANH-----P--LEPYLSLLKLDGKLILTGVIN  278 (357)
Q Consensus       249 ~d~~g~~~-----~--~~~~~~~l~~~G~~v~~g~~~  278 (357)
                      ++|+.-..     .  +......+.+...++++-..+
T Consensus        78 INaTpiGm~~~~~~~~l~~~~~~~~~~~~v~D~vY~P  114 (167)
T d1npya1          78 VNVTSIGMKGGKEEMDLAFPKAFIDNASVAFDVVAMP  114 (167)
T ss_dssp             EECSSTTCTTSTTTTSCSSCHHHHHHCSEEEECCCSS
T ss_pred             eeccccCCccccccccccccHhhcCCcceEEEEeecc
Confidence            99876320     0  111123345566666664433

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.74  E-value=7.6e-05  Score=62.34  Aligned_cols=76  Identities=13%  Similarity=0.173  Sum_probs=57.3

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCCc---EEEcCCChhHHHHh-------hCCc
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGAD---QYLVSSDATRMQEA-------ADSL  245 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~~---~vv~~~~~~~~~~~-------~~~~  245 (357)
                      .|+++||+|+ +++|.+++..+...|++|+++++++++.+.+.++   .|..   ...|.++.+.++++       .+.+
T Consensus         6 ~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~i   85 (244)
T d1yb1a_           6 TGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDV   85 (244)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence            6899999987 9999999988889999999999999887655443   4432   23466665543332       2379


Q ss_pred             cEEEEcCCCC
Q 018382          246 DYIIDTVPAN  255 (357)
Q Consensus       246 d~v~d~~g~~  255 (357)
                      |++++++|..
T Consensus        86 dilinnag~~   95 (244)
T d1yb1a_          86 SILVNNAGVV   95 (244)
T ss_dssp             SEEEECCCCC
T ss_pred             ceeEeecccc
Confidence            9999998875

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.74  E-value=7e-05  Score=62.85  Aligned_cols=76  Identities=21%  Similarity=0.191  Sum_probs=56.5

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHH----HhcCCcE---EEcCCChhHHHHh-------hCC
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAM----EHLGADQ---YLVSSDATRMQEA-------ADS  244 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~----~~~g~~~---vv~~~~~~~~~~~-------~~~  244 (357)
                      +|+++||+|+ +++|.+.++.+...|++|+++.+++++.+.+.    +++|.+.   ..|..+++.++++       .++
T Consensus         4 ~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   83 (251)
T d1vl8a_           4 RGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGK   83 (251)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            5789999987 99999999999999999999999988765443    3356432   2466665443332       237


Q ss_pred             ccEEEEcCCCC
Q 018382          245 LDYIIDTVPAN  255 (357)
Q Consensus       245 ~d~v~d~~g~~  255 (357)
                      +|++++++|..
T Consensus        84 iDiLVnnAG~~   94 (251)
T d1vl8a_          84 LDTVVNAAGIN   94 (251)
T ss_dssp             CCEEEECCCCC
T ss_pred             CCEEEECCCCC
Confidence            99999998763

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.71  E-value=4.4e-05  Score=62.43  Aligned_cols=102  Identities=23%  Similarity=0.293  Sum_probs=69.7

Q ss_pred             hhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC--eEEEEeCCcHHHHHHHHhc---CCcE-EEcCCChhHHHHhhCC
Q 018382          171 PLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH--HVTVISSSDKKRVEAMEHL---GADQ-YLVSSDATRMQEAADS  244 (357)
Q Consensus       171 ~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~--~V~~~~~~~~~~~~~~~~~---g~~~-vv~~~~~~~~~~~~~~  244 (357)
                      ++..+. +++|++||-+|+|. |..++.+++..|.  +|+.+..+++..+.+++.+   +.+. .+...+........+.
T Consensus        67 ~l~~l~-l~~g~~VLdiG~Gt-G~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~d~~~~~~~~~~  144 (213)
T d1dl5a1          67 FMEWVG-LDKGMRVLEIGGGT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVPEFSP  144 (213)
T ss_dssp             HHHHTT-CCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCC
T ss_pred             HHHhhh-ccccceEEEecCcc-chhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhcccccccccCchHHccccccc
Confidence            444454 59999999999865 8888889988764  8999999888766665533   3322 2222221111112347


Q ss_pred             ccEEEEcCCCCCChHHHHhccccCCeEEEE
Q 018382          245 LDYIIDTVPANHPLEPYLSLLKLDGKLILT  274 (357)
Q Consensus       245 ~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~  274 (357)
                      ||+|+...+-.......++.|+|+|+++..
T Consensus       145 fD~I~~~~~~~~~p~~l~~~LkpGG~lv~p  174 (213)
T d1dl5a1         145 YDVIFVTVGVDEVPETWFTQLKEGGRVIVP  174 (213)
T ss_dssp             EEEEEECSBBSCCCHHHHHHEEEEEEEEEE
T ss_pred             hhhhhhhccHHHhHHHHHHhcCCCcEEEEE
Confidence            999998776664557788999999999864

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=97.71  E-value=5.8e-05  Score=63.46  Aligned_cols=76  Identities=22%  Similarity=0.202  Sum_probs=59.9

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcE---EEcCCChhHHHHh-------hCCccEE
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQ---YLVSSDATRMQEA-------ADSLDYI  248 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~-------~~~~d~v  248 (357)
                      +|+++||+|+ +++|++.++.+...|++|+++.+++++.+.+.+++|...   ..|..+++.++++       .+++|++
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDil   83 (254)
T d1hdca_           4 SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGL   83 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEcccCCHHHHHHHHHHHHHHcCCccEE
Confidence            6889999987 999999999999999999999999999888888787432   3455555444333       2479999


Q ss_pred             EEcCCCC
Q 018382          249 IDTVPAN  255 (357)
Q Consensus       249 ~d~~g~~  255 (357)
                      ++++|..
T Consensus        84 VnnAg~~   90 (254)
T d1hdca_          84 VNNAGIS   90 (254)
T ss_dssp             EECCCCC
T ss_pred             EecCccc
Confidence            9998764

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=97.70  E-value=4.6e-05  Score=64.24  Aligned_cols=76  Identities=16%  Similarity=0.206  Sum_probs=60.7

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcE---EEcCCChhHHHHhh-------CCccEE
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQ---YLVSSDATRMQEAA-------DSLDYI  248 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~~-------~~~d~v  248 (357)
                      +|+++||+|+ +++|++.++.+...|++|+++.+++++.+.+.+++|...   ..|..+++.++++.       +++|++
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDil   83 (256)
T d1k2wa_           4 DGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAIALDVTDQASIDRCVAELLDRWGSIDIL   83 (256)
T ss_dssp             TTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEeeCCCHHHHHHHHHHHHHHhCCccEE
Confidence            5789999987 999999999999999999999999999888888788543   34666655444332       479999


Q ss_pred             EEcCCCC
Q 018382          249 IDTVPAN  255 (357)
Q Consensus       249 ~d~~g~~  255 (357)
                      ++++|..
T Consensus        84 VnnAg~~   90 (256)
T d1k2wa_          84 VNNAALF   90 (256)
T ss_dssp             EECCCCC
T ss_pred             Eeecccc
Confidence            9998863

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.68  E-value=3.8e-05  Score=60.46  Aligned_cols=103  Identities=18%  Similarity=0.137  Sum_probs=69.6

Q ss_pred             hhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCc---EEEcCCChhHHHHhhCCcc
Q 018382          170 SPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGAD---QYLVSSDATRMQEAADSLD  246 (357)
Q Consensus       170 ~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~~~~~~d  246 (357)
                      .+|.+.+...++++|||+|+|+.+.+++..+...|++|+++.|+.++.+.+.+.+...   ..+...+     .....+|
T Consensus         7 ~~l~~~~~~~~~k~vlIlGaGGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~~~~~~~~~~-----~~~~~~d   81 (170)
T d1nyta1           7 SDLERLSFIRPGLRILLIGAGGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSMDE-----LEGHEFD   81 (170)
T ss_dssp             HHHHHHTCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCSGG-----GTTCCCS
T ss_pred             HHHHHcCCCCCCCEEEEECCcHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhccccccccccc-----ccccccc
Confidence            3455555546889999999999999999999999999999999999988877756521   2222111     1224799


Q ss_pred             EEEEcCCCCC---ChHHHHhccccCCeEEEEccC
Q 018382          247 YIIDTVPANH---PLEPYLSLLKLDGKLILTGVI  277 (357)
Q Consensus       247 ~v~d~~g~~~---~~~~~~~~l~~~G~~v~~g~~  277 (357)
                      ++++|+....   ....-.+.++++..++++-..
T Consensus        82 liIN~Tp~G~~~~~~~~~~~~~~~~~~v~D~vY~  115 (170)
T d1nyta1          82 LIINATSSGISGDIPAIPSSLIHPGIYCYDMFYQ  115 (170)
T ss_dssp             EEEECCSCGGGTCCCCCCGGGCCTTCEEEESCCC
T ss_pred             eeecccccCcccCCCCCcHHHhccCcEEEEeecC
Confidence            9999986531   011123446666666665433

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.66  E-value=4.9e-05  Score=64.80  Aligned_cols=97  Identities=19%  Similarity=0.281  Sum_probs=66.5

Q ss_pred             CCCeE-EEEec-ChHHHHHHH-HHHHcCCeEEEEeCCcHHHHHHHHhc---CCc---EEEcCCChhHHHHh-------hC
Q 018382          180 SGLRG-GILGL-GGVGHMGVL-IAKAMGHHVTVISSSDKKRVEAMEHL---GAD---QYLVSSDATRMQEA-------AD  243 (357)
Q Consensus       180 ~~~~V-lI~G~-g~~G~~ai~-la~~~g~~V~~~~~~~~~~~~~~~~~---g~~---~vv~~~~~~~~~~~-------~~  243 (357)
                      .|++| ||+|+ +++|+++++ |++..|++|+++++++++.+.+.+++   |.+   ..+|..+.+.++++       .+
T Consensus         1 ~g~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g   80 (275)
T d1wmaa1           1 SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYG   80 (275)
T ss_dssp             CCCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcC
Confidence            36777 66687 999999776 45566899999999999876665544   321   23466665443332       24


Q ss_pred             CccEEEEcCCCC-------------------------CChHHHHhccccCCeEEEEcc
Q 018382          244 SLDYIIDTVPAN-------------------------HPLEPYLSLLKLDGKLILTGV  276 (357)
Q Consensus       244 ~~d~v~d~~g~~-------------------------~~~~~~~~~l~~~G~~v~~g~  276 (357)
                      ++|++++++|-.                         ...+.++..|++.|+++.++.
T Consensus        81 ~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS  138 (275)
T d1wmaa1          81 GLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSS  138 (275)
T ss_dssp             SEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECC
T ss_pred             CcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccc
Confidence            799999998863                         123345667788899998865

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.66  E-value=0.00014  Score=61.17  Aligned_cols=76  Identities=14%  Similarity=0.096  Sum_probs=56.4

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc---C-CcE----EEcCCChhHHHHh-------hC
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL---G-ADQ----YLVSSDATRMQEA-------AD  243 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~---g-~~~----vv~~~~~~~~~~~-------~~  243 (357)
                      +|+++||+|+ +++|.+.+..+...|++|+++.+++++.+.+.+++   + ...    ..|..+++.++++       .+
T Consensus         9 k~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~g   88 (257)
T d1xg5a_           9 RDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHS   88 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence            5789999987 99999999999999999999999988876654433   2 112    2366665443332       24


Q ss_pred             CccEEEEcCCCC
Q 018382          244 SLDYIIDTVPAN  255 (357)
Q Consensus       244 ~~d~v~d~~g~~  255 (357)
                      ++|++++++|..
T Consensus        89 ~iD~lVnnAg~~  100 (257)
T d1xg5a_          89 GVDICINNAGLA  100 (257)
T ss_dssp             CCSEEEECCCCC
T ss_pred             CCCEEEeccccc
Confidence            799999998774

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=97.66  E-value=6.1e-05  Score=64.19  Aligned_cols=75  Identities=21%  Similarity=0.150  Sum_probs=59.1

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcE---EEcCCChhHHHHh-------hCCccEE
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQ---YLVSSDATRMQEA-------ADSLDYI  248 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~-------~~~~d~v  248 (357)
                      +|+++||+|+ +++|.++++.+...|++|+++++++++.+.+.+++|.+.   ..|..+.+.++++       .+.+|++
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~idil   83 (276)
T d1bdba_           4 KGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKIDTL   83 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeeEEecccccHHHHHHHHHHHHHHhCCcccc
Confidence            5899999987 999999999999999999999999999888877787432   3355555443332       2479999


Q ss_pred             EEcCCC
Q 018382          249 IDTVPA  254 (357)
Q Consensus       249 ~d~~g~  254 (357)
                      ++++|.
T Consensus        84 vnnAG~   89 (276)
T d1bdba_          84 IPNAGI   89 (276)
T ss_dssp             ECCCCC
T ss_pred             cccccc
Confidence            999874

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=97.65  E-value=0.00011  Score=62.39  Aligned_cols=76  Identities=16%  Similarity=0.211  Sum_probs=58.7

Q ss_pred             CCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCC---cE--EEcCCChhHHHHh-------hCCc
Q 018382          179 QSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGA---DQ--YLVSSDATRMQEA-------ADSL  245 (357)
Q Consensus       179 ~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~---~~--vv~~~~~~~~~~~-------~~~~  245 (357)
                      -+|+++||+|+ +++|.+.++.+...|++|+++++++++.+.+.++++.   ..  ..|..+++.++++       .+.+
T Consensus         4 L~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   83 (268)
T d2bgka1           4 LQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKL   83 (268)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHcCCc
Confidence            36899999987 9999999999999999999999999988877776652   11  2366665544433       2379


Q ss_pred             cEEEEcCCC
Q 018382          246 DYIIDTVPA  254 (357)
Q Consensus       246 d~v~d~~g~  254 (357)
                      |++++++|.
T Consensus        84 D~lVnnAG~   92 (268)
T d2bgka1          84 DIMFGNVGV   92 (268)
T ss_dssp             CEEEECCCC
T ss_pred             ceecccccc
Confidence            999999874

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=97.63  E-value=0.00013  Score=60.85  Aligned_cols=77  Identities=17%  Similarity=0.197  Sum_probs=61.0

Q ss_pred             CCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEE---EcCCChhHHHHh----h---CCccE
Q 018382          179 QSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQY---LVSSDATRMQEA----A---DSLDY  247 (357)
Q Consensus       179 ~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~v---v~~~~~~~~~~~----~---~~~d~  247 (357)
                      -.|+++||+|+ +++|.+.++-+...|++|+++.+++++.+.+.++++.+..   .|.++++.++++    .   +++|+
T Consensus         3 l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~iDi   82 (241)
T d2a4ka1           3 LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHG   82 (241)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCceEEEEecCCCHHHHHHHHHHHHHHhCCccE
Confidence            36899999987 9999999999999999999999999999888888885432   356665544332    2   47999


Q ss_pred             EEEcCCCC
Q 018382          248 IIDTVPAN  255 (357)
Q Consensus       248 v~d~~g~~  255 (357)
                      .+++++..
T Consensus        83 LinnAg~~   90 (241)
T d2a4ka1          83 VAHFAGVA   90 (241)
T ss_dssp             EEEGGGGT
T ss_pred             eccccccc
Confidence            99987653

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=97.62  E-value=6.5e-05  Score=61.29  Aligned_cols=102  Identities=25%  Similarity=0.290  Sum_probs=69.5

Q ss_pred             hhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHH---hcCCcEE-EcCCChhHHHHhhCCcc
Q 018382          171 PLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAME---HLGADQY-LVSSDATRMQEAADSLD  246 (357)
Q Consensus       171 ~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~---~~g~~~v-v~~~~~~~~~~~~~~~d  246 (357)
                      ++..+.. ++|++||.+|+|. |+.++.+++..|.+|+.+...++-.+.+++   ++|.+.+ +...+...-....++||
T Consensus        70 ml~~L~l-~~g~~VLeIGsGs-GY~taila~l~g~~V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~gd~~~g~~~~~pfD  147 (215)
T d1jg1a_          70 MLEIANL-KPGMNILEVGTGS-GWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKGFPPKAPYD  147 (215)
T ss_dssp             HHHHHTC-CTTCCEEEECCTT-SHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEE
T ss_pred             HHHhhcc-CccceEEEecCCC-ChhHHHHHHhhCceeEEEeccHHHHHHHHHHHHHcCCceeEEEECccccCCcccCcce
Confidence            4544444 9999999999853 788888888888889999988764444432   3675433 22222111112234799


Q ss_pred             EEEEcCCCCCChHHHHhccccCCeEEEE
Q 018382          247 YIIDTVPANHPLEPYLSLLKLDGKLILT  274 (357)
Q Consensus       247 ~v~d~~g~~~~~~~~~~~l~~~G~~v~~  274 (357)
                      .|+-+.+-...-...++.|+++|+++..
T Consensus       148 ~Iiv~~a~~~ip~~l~~qL~~gGrLv~p  175 (215)
T d1jg1a_         148 VIIVTAGAPKIPEPLIEQLKIGGKLIIP  175 (215)
T ss_dssp             EEEECSBBSSCCHHHHHTEEEEEEEEEE
T ss_pred             eEEeecccccCCHHHHHhcCCCCEEEEE
Confidence            9987766664567889999999999874

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=97.57  E-value=0.00029  Score=55.83  Aligned_cols=112  Identities=16%  Similarity=0.107  Sum_probs=71.9

Q ss_pred             hhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHH---HhcC-----CcEEEcCCChhHHHHh
Q 018382          171 PLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAM---EHLG-----ADQYLVSSDATRMQEA  241 (357)
Q Consensus       171 ~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~---~~~g-----~~~vv~~~~~~~~~~~  241 (357)
                      +|...+.--++++|+|+|+|+.|.+++..+...|+ +++++.|+.++.+.+.   ++++     ...+.+..+.+.+.+.
T Consensus         8 ~l~~~~~~l~~k~vlIlGaGGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (182)
T d1vi2a1           8 AIKESGFDIKGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEA   87 (182)
T ss_dssp             HHHHTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHH
T ss_pred             HHHHcCCCcCCCEEEEECCcHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhhh
Confidence            44444432467899999999999999999988898 7888888766544322   2232     2234455555545555


Q ss_pred             hCCccEEEEcCCCCC------ChHHHHhccccCCeEEEEccCCCCcc
Q 018382          242 ADSLDYIIDTVPANH------PLEPYLSLLKLDGKLILTGVINTPMQ  282 (357)
Q Consensus       242 ~~~~d~v~d~~g~~~------~~~~~~~~l~~~G~~v~~g~~~~~~~  282 (357)
                      ...+|++++|+.-..      .+..-...++++..++++-..+..+.
T Consensus        88 ~~~~diiIN~Tp~G~~~~~~~~~~~~~~~~~~~~~v~Di~Y~p~~T~  134 (182)
T d1vi2a1          88 LASADILTNGTKVGMKPLENESLVNDISLLHPGLLVTECVYNPHMTK  134 (182)
T ss_dssp             HHTCSEEEECSSTTSTTSCSCCSCCCGGGSCTTCEEEECCCSSSSCH
T ss_pred             hcccceeccccCCccccccchhhhhHHHhhhcchhhHHhhcCccccH
Confidence            568999999986431      11112356778888888754433333

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=97.56  E-value=0.00012  Score=61.37  Aligned_cols=76  Identities=16%  Similarity=0.187  Sum_probs=55.9

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCCc---EEEcCCChhHHHHh-------hCCc
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGAD---QYLVSSDATRMQEA-------ADSL  245 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~~---~vv~~~~~~~~~~~-------~~~~  245 (357)
                      .++.+||+|+ +++|.+.++.+...|++|+++.+++++.+.+.++   .|.+   ...|..+++.++++       .+++
T Consensus         9 enKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~i   88 (251)
T d2c07a1           9 ENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNV   88 (251)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCc
Confidence            4788999987 9999999999888999999999998877655543   4432   23455665443332       2489


Q ss_pred             cEEEEcCCCC
Q 018382          246 DYIIDTVPAN  255 (357)
Q Consensus       246 d~v~d~~g~~  255 (357)
                      |++++++|..
T Consensus        89 Dilvnnag~~   98 (251)
T d2c07a1          89 DILVNNAGIT   98 (251)
T ss_dssp             CEEEECCCCC
T ss_pred             eeeeeccccc
Confidence            9999988764

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.56  E-value=0.00016  Score=56.82  Aligned_cols=96  Identities=15%  Similarity=0.129  Sum_probs=68.3

Q ss_pred             CCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEc--CCChhHHHHhhCCccEEEEcCCCCCC
Q 018382          180 SGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLV--SSDATRMQEAADSLDYIIDTVPANHP  257 (357)
Q Consensus       180 ~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~--~~~~~~~~~~~~~~d~v~d~~g~~~~  257 (357)
                      ++++|+|+|+|.+|..+++.+...|.+|+++.++.++.+.+.+.++...+..  ..............|.++.+......
T Consensus         1 ~~K~IliiGaG~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~~~~   80 (182)
T d1e5qa1           1 ATKSVLMLGSGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIPYTFH   80 (182)
T ss_dssp             CCCEEEEECCSTTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECSCGGGH
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcccccccccccccchhhhHhhhhccceeEeeccchhh
Confidence            3689999999999999999999889999999999999998888676433322  22233344445578888877766533


Q ss_pred             hHHHHhccccCCeEEEEc
Q 018382          258 LEPYLSLLKLDGKLILTG  275 (357)
Q Consensus       258 ~~~~~~~l~~~G~~v~~g  275 (357)
                      ......+...+..++.+.
T Consensus        81 ~~~~~~~~~~~~~~~~~~   98 (182)
T d1e5qa1          81 ATVIKSAIRQKKHVVTTS   98 (182)
T ss_dssp             HHHHHHHHHHTCEEECSS
T ss_pred             hHHHHHHHhhccceeecc
Confidence            444545555666666554

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.55  E-value=0.00018  Score=60.38  Aligned_cols=76  Identities=16%  Similarity=0.200  Sum_probs=57.4

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcC-----Cc---EEEcCCChhHHHHh-------hC
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLG-----AD---QYLVSSDATRMQEA-------AD  243 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g-----~~---~vv~~~~~~~~~~~-------~~  243 (357)
                      .|+++||+|+ +++|.+.++.+...|++|+++.+++++.+.+.+++.     ..   ...|..+++.++++       .+
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   81 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG   81 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence            4789999987 999999999999999999999999888776655442     11   23466665444333       24


Q ss_pred             CccEEEEcCCCC
Q 018382          244 SLDYIIDTVPAN  255 (357)
Q Consensus       244 ~~d~v~d~~g~~  255 (357)
                      ++|++++++|..
T Consensus        82 ~iDilVnnAg~~   93 (254)
T d2gdza1          82 RLDILVNNAGVN   93 (254)
T ss_dssp             CCCEEEECCCCC
T ss_pred             CcCeeccccccc
Confidence            799999999874

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=97.53  E-value=0.00017  Score=59.13  Aligned_cols=100  Identities=20%  Similarity=0.193  Sum_probs=68.0

Q ss_pred             hhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCC---cEEEcCCChhHHHHhhCCccE
Q 018382          171 PLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGA---DQYLVSSDATRMQEAADSLDY  247 (357)
Q Consensus       171 ~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~---~~vv~~~~~~~~~~~~~~~d~  247 (357)
                      ++..+. +++|++||-+|+| .|..++.+++. +.+|+.+..+++..+.+++.+..   ..++..+...... ..++||.
T Consensus        62 ml~~L~-l~~g~~VLdIG~G-sGy~ta~La~l-~~~V~aiE~~~~~~~~A~~~~~~~~nv~~~~~d~~~g~~-~~~pfD~  137 (224)
T d1vbfa_          62 MLDELD-LHKGQKVLEIGTG-IGYYTALIAEI-VDKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGYE-EEKPYDR  137 (224)
T ss_dssp             HHHHTT-CCTTCEEEEECCT-TSHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCCG-GGCCEEE
T ss_pred             HHHHhh-hcccceEEEecCC-CCHHHHHHHHH-hcccccccccHHHHHHHHHHHhcccccccccCchhhcch-hhhhHHH
Confidence            344444 5999999999986 46777777775 67999999998877777664442   1222222111111 1347999


Q ss_pred             EEEcCCCCCChHHHHhccccCCeEEEE
Q 018382          248 IIDTVPANHPLEPYLSLLKLDGKLILT  274 (357)
Q Consensus       248 v~d~~g~~~~~~~~~~~l~~~G~~v~~  274 (357)
                      |+-+.+........++.|+++|++|..
T Consensus       138 Iiv~~a~~~ip~~l~~qLk~GGrLV~p  164 (224)
T d1vbfa_         138 VVVWATAPTLLCKPYEQLKEGGIMILP  164 (224)
T ss_dssp             EEESSBBSSCCHHHHHTEEEEEEEEEE
T ss_pred             HHhhcchhhhhHHHHHhcCCCCEEEEE
Confidence            987666654667788999999999875

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.52  E-value=0.00044  Score=50.10  Aligned_cols=96  Identities=11%  Similarity=-0.075  Sum_probs=66.6

Q ss_pred             CCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHH-HHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCCCh
Q 018382          180 SGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKR-VEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPL  258 (357)
Q Consensus       180 ~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~-~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~~  258 (357)
                      .|++|||+|+|.+|..-++.+...|++|++++...... ..+.+ -+....+...-   ......++++|+.+.+....-
T Consensus        11 ~~k~vlVvG~G~va~~ka~~ll~~ga~v~v~~~~~~~~~~~~~~-~~~i~~~~~~~---~~~dl~~~~lv~~at~d~~~n   86 (113)
T d1pjqa1          11 RDRDCLIVGGGDVAERKARLLLEAGARLTVNALTFIPQFTVWAN-EGMLTLVEGPF---DETLLDSCWLAIAATDDDTVN   86 (113)
T ss_dssp             BTCEEEEECCSHHHHHHHHHHHHTTBEEEEEESSCCHHHHHHHT-TTSCEEEESSC---CGGGGTTCSEEEECCSCHHHH
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCChHHHHHHh-cCCceeeccCC---CHHHhCCCcEEeecCCCHHHH
Confidence            57899999999999999999999999999887654432 22222 23222222111   112234799999998887444


Q ss_pred             HHHHhccccCCeEEEEccCCC
Q 018382          259 EPYLSLLKLDGKLILTGVINT  279 (357)
Q Consensus       259 ~~~~~~l~~~G~~v~~g~~~~  279 (357)
                      +...+..++.|.+|.+...+.
T Consensus        87 ~~i~~~a~~~~ilVNv~D~p~  107 (113)
T d1pjqa1          87 QRVSDAAESRRIFCNVVDAPK  107 (113)
T ss_dssp             HHHHHHHHHTTCEEEETTCTT
T ss_pred             HHHHHHHHHcCCEEEeCCChh
Confidence            577788899999998865443

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=97.49  E-value=0.00014  Score=61.00  Aligned_cols=76  Identities=16%  Similarity=0.107  Sum_probs=58.0

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCC--c---EEEcCCChhHHHHh-------hCCcc
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGA--D---QYLVSSDATRMQEA-------ADSLD  246 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~--~---~vv~~~~~~~~~~~-------~~~~d  246 (357)
                      +|+++||+|+ +++|.+.++.+...|++|+++.+++++.+.+.+.++.  .   ...|..+++.++++       .+++|
T Consensus         5 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD   84 (251)
T d1zk4a1           5 DGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVS   84 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHhCCce
Confidence            5889999987 9999999999999999999999999888877765652  1   22355565443332       24899


Q ss_pred             EEEEcCCCC
Q 018382          247 YIIDTVPAN  255 (357)
Q Consensus       247 ~v~d~~g~~  255 (357)
                      ++++++|..
T Consensus        85 iLVnnAg~~   93 (251)
T d1zk4a1          85 TLVNNAGIA   93 (251)
T ss_dssp             EEEECCCCC
T ss_pred             EEEeccccc
Confidence            999998764

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=97.49  E-value=0.00018  Score=60.53  Aligned_cols=75  Identities=12%  Similarity=0.197  Sum_probs=56.2

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc---CCc---EEEcCCChhHHHHh-------hCCc
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL---GAD---QYLVSSDATRMQEA-------ADSL  245 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~---g~~---~vv~~~~~~~~~~~-------~~~~  245 (357)
                      +|+++||+|+ +++|++.++.+...|++|+++++++++.+.+.+.+   |.+   ...|..+++.++++       .+++
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   83 (260)
T d1zema1           4 NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKI   83 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            6899999987 99999999999999999999999988776655433   432   23455565443332       2479


Q ss_pred             cEEEEcCCC
Q 018382          246 DYIIDTVPA  254 (357)
Q Consensus       246 d~v~d~~g~  254 (357)
                      |++++++|.
T Consensus        84 DilVnnaG~   92 (260)
T d1zema1          84 DFLFNNAGY   92 (260)
T ss_dssp             CEEEECCCC
T ss_pred             Ceehhhhcc
Confidence            999999875

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.46  E-value=8.3e-05  Score=62.17  Aligned_cols=77  Identities=17%  Similarity=0.179  Sum_probs=59.3

Q ss_pred             CCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCc-EEEcCCChhHHHHhh---CCccEEEEcCC
Q 018382          179 QSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGAD-QYLVSSDATRMQEAA---DSLDYIIDTVP  253 (357)
Q Consensus       179 ~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~~~---~~~d~v~d~~g  253 (357)
                      -+|+++||+|+ +++|.+.++.+...|++|+++++++++.+.+.+..+.. .+.|....+..+...   .++|+++++.|
T Consensus         4 l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~id~lVn~ag   83 (245)
T d2ag5a1           4 LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEVERLDVLFNVAG   83 (245)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhccCCceeeeeccccccccccccccccceeEEeccc
Confidence            36899999987 99999999999999999999999998888777755532 334544444444332   48999999987


Q ss_pred             CC
Q 018382          254 AN  255 (357)
Q Consensus       254 ~~  255 (357)
                      ..
T Consensus        84 ~~   85 (245)
T d2ag5a1          84 FV   85 (245)
T ss_dssp             CC
T ss_pred             cc
Confidence            74

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=97.45  E-value=0.00019  Score=60.37  Aligned_cols=76  Identities=18%  Similarity=0.166  Sum_probs=56.2

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCCcE---EEcCCChhHHHHh-------h-CC
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGADQ---YLVSSDATRMQEA-------A-DS  244 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~~~---vv~~~~~~~~~~~-------~-~~  244 (357)
                      +|+++||+|+ +++|.+.++.+...|++|+++++++++.+.+.+.   .+...   .+|.++.+.++++       . +.
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~g~   84 (258)
T d1ae1a_           5 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGK   84 (258)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            6899999986 9999999999999999999999998776655443   34332   3466665443332       2 25


Q ss_pred             ccEEEEcCCCC
Q 018382          245 LDYIIDTVPAN  255 (357)
Q Consensus       245 ~d~v~d~~g~~  255 (357)
                      .|++++++|..
T Consensus        85 idilinnag~~   95 (258)
T d1ae1a_          85 LNILVNNAGVV   95 (258)
T ss_dssp             CCEEEECCCCC
T ss_pred             cEEEecccccc
Confidence            89999988775

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=97.42  E-value=0.00036  Score=58.65  Aligned_cols=76  Identities=13%  Similarity=0.156  Sum_probs=53.8

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcH-HHHHH----HHhcCCcEE---EcCCChhHHHHhh-------C
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDK-KRVEA----MEHLGADQY---LVSSDATRMQEAA-------D  243 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~-~~~~~----~~~~g~~~v---v~~~~~~~~~~~~-------~  243 (357)
                      +|+++||+|+ +++|++.++.+...|++|+++.+++. +.+.+    .+..|....   .|..+++.++++.       +
T Consensus         3 ~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   82 (260)
T d1x1ta1           3 KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMG   82 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred             CcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            6789999987 99999999999999999999998753 33333    233454332   3555654443332       4


Q ss_pred             CccEEEEcCCCC
Q 018382          244 SLDYIIDTVPAN  255 (357)
Q Consensus       244 ~~d~v~d~~g~~  255 (357)
                      ++|++++++|..
T Consensus        83 ~iDiLVnnAG~~   94 (260)
T d1x1ta1          83 RIDILVNNAGIQ   94 (260)
T ss_dssp             CCSEEEECCCCC
T ss_pred             CCcEEEeecccc
Confidence            799999998864

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=97.42  E-value=0.00018  Score=61.05  Aligned_cols=75  Identities=17%  Similarity=0.247  Sum_probs=56.1

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc---CC------cEEEcCCChhHHHHhh-------
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL---GA------DQYLVSSDATRMQEAA-------  242 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~---g~------~~vv~~~~~~~~~~~~-------  242 (357)
                      +|+++||+|+ +++|.++++.+...|++|+++++++++.+.+.+.+   +.      ....|..+++.++++.       
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~   83 (272)
T d1xkqa_           4 SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQF   83 (272)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence            5789999987 99999999999999999999999998876665433   21      1234666655443332       


Q ss_pred             CCccEEEEcCCC
Q 018382          243 DSLDYIIDTVPA  254 (357)
Q Consensus       243 ~~~d~v~d~~g~  254 (357)
                      +++|++++++|.
T Consensus        84 g~iDilvnnAG~   95 (272)
T d1xkqa_          84 GKIDVLVNNAGA   95 (272)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCceEEEeCCcc
Confidence            379999999876

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=97.38  E-value=0.00025  Score=59.62  Aligned_cols=76  Identities=20%  Similarity=0.193  Sum_probs=56.0

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc---CCcE---EEcCCChhHHHH----hh---C-C
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL---GADQ---YLVSSDATRMQE----AA---D-S  244 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~---g~~~---vv~~~~~~~~~~----~~---~-~  244 (357)
                      +|+++||+|+ +++|.+.++.+...|++|++.++++++.+.+.+++   |...   ..|..+++.+++    +.   + .
T Consensus         7 ~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~~   86 (259)
T d2ae2a_           7 EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGK   86 (259)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHhCCC
Confidence            6899999987 99999999999999999999999988876665433   3222   245555443332    21   2 5


Q ss_pred             ccEEEEcCCCC
Q 018382          245 LDYIIDTVPAN  255 (357)
Q Consensus       245 ~d~v~d~~g~~  255 (357)
                      +|++++++|..
T Consensus        87 idilvnnAG~~   97 (259)
T d2ae2a_          87 LNILVNNAGIV   97 (259)
T ss_dssp             CCEEEECCCCC
T ss_pred             ceEEEECCcee
Confidence            89999998863

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=97.38  E-value=0.00016  Score=60.79  Aligned_cols=76  Identities=14%  Similarity=0.223  Sum_probs=56.5

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCCcE---EEcCCChhHHHHh-------hCCc
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGADQ---YLVSSDATRMQEA-------ADSL  245 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~~~---vv~~~~~~~~~~~-------~~~~  245 (357)
                      +|+++||+|+ +++|.+.++.+...|++|+++.+++++.+.+.++   .|.+.   ..|..+++.++++       .+++
T Consensus        10 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~g~i   89 (255)
T d1fmca_          10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKV   89 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            6899999987 9999999999999999999999998876655432   45332   3455555443332       2479


Q ss_pred             cEEEEcCCCC
Q 018382          246 DYIIDTVPAN  255 (357)
Q Consensus       246 d~v~d~~g~~  255 (357)
                      |++++++|..
T Consensus        90 DilvnnAG~~   99 (255)
T d1fmca_          90 DILVNNAGGG   99 (255)
T ss_dssp             CEEEECCCCC
T ss_pred             CEeeeCCcCC
Confidence            9999998764

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=97.37  E-value=0.00046  Score=57.93  Aligned_cols=75  Identities=15%  Similarity=0.150  Sum_probs=55.4

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc-----CCc---EEEcCCChhHHHHh-------hC
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL-----GAD---QYLVSSDATRMQEA-------AD  243 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~-----g~~---~vv~~~~~~~~~~~-------~~  243 (357)
                      +|+++||+|+ +++|.+.++.+...|++|+++.+++++.+.+.+++     +..   ...|..+++.++++       .+
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~G   82 (258)
T d1iy8a_           3 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFG   82 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHhC
Confidence            5789999987 99999999999999999999999988766554322     222   12366665544433       24


Q ss_pred             CccEEEEcCCC
Q 018382          244 SLDYIIDTVPA  254 (357)
Q Consensus       244 ~~d~v~d~~g~  254 (357)
                      ++|++++++|.
T Consensus        83 ~iDiLVnnAG~   93 (258)
T d1iy8a_          83 RIDGFFNNAGI   93 (258)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCcc
Confidence            79999999874

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=97.37  E-value=0.00026  Score=59.43  Aligned_cols=75  Identities=11%  Similarity=0.116  Sum_probs=55.2

Q ss_pred             CCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCCcE---EEcCCChhHHHHh-------hCCcc
Q 018382          181 GLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGADQ---YLVSSDATRMQEA-------ADSLD  246 (357)
Q Consensus       181 ~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~~~---vv~~~~~~~~~~~-------~~~~d  246 (357)
                      |+.+||+|+ +++|++.++.+...|++|+++++++++.+.+.++   .|.+.   ..|..+++.++++       .+++|
T Consensus         2 gKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iD   81 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVD   81 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence            567799987 9999999999999999999999998876655442   45332   3466665544433       23799


Q ss_pred             EEEEcCCCC
Q 018382          247 YIIDTVPAN  255 (357)
Q Consensus       247 ~v~d~~g~~  255 (357)
                      ++++++|..
T Consensus        82 ilVnnAG~~   90 (257)
T d2rhca1          82 VLVNNAGRP   90 (257)
T ss_dssp             EEEECCCCC
T ss_pred             EEEeccccc
Confidence            999998764

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.36  E-value=0.00025  Score=60.92  Aligned_cols=77  Identities=14%  Similarity=0.176  Sum_probs=56.3

Q ss_pred             CCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc--------CCcE---EEcCCChhHHHHh-----
Q 018382          179 QSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL--------GADQ---YLVSSDATRMQEA-----  241 (357)
Q Consensus       179 ~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~--------g~~~---vv~~~~~~~~~~~-----  241 (357)
                      -+|+++||+|+ +++|.+.++.+...|++|+++++++++.+.+.+++        +...   ..|..+++.++++     
T Consensus        10 L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~   89 (297)
T d1yxma1          10 LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTL   89 (297)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHHH
Confidence            47899999987 99999999999999999999999988766554332        2222   2355565443332     


Q ss_pred             --hCCccEEEEcCCCC
Q 018382          242 --ADSLDYIIDTVPAN  255 (357)
Q Consensus       242 --~~~~d~v~d~~g~~  255 (357)
                        .+++|++++++|..
T Consensus        90 ~~~G~iDiLVnnAg~~  105 (297)
T d1yxma1          90 DTFGKINFLVNNGGGQ  105 (297)
T ss_dssp             HHHSCCCEEEECCCCC
T ss_pred             HHhCCeEEEEeecccc
Confidence              24799999998764

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.36  E-value=0.00032  Score=57.54  Aligned_cols=96  Identities=21%  Similarity=0.228  Sum_probs=65.6

Q ss_pred             CCCCCCeEEEEecChHHHHHHHHHHHcCC--eEEEEeCCcHHHHHHHHhc---CC-------cEEEcCCChhHHHHhhCC
Q 018382          177 LKQSGLRGGILGLGGVGHMGVLIAKAMGH--HVTVISSSDKKRVEAMEHL---GA-------DQYLVSSDATRMQEAADS  244 (357)
Q Consensus       177 ~~~~~~~VlI~G~g~~G~~ai~la~~~g~--~V~~~~~~~~~~~~~~~~~---g~-------~~vv~~~~~~~~~~~~~~  244 (357)
                      .+++|++||-+|+|. |..++.+++..|.  +|+.+..+++-.+.+++.+   +.       ..+.. .+........+.
T Consensus        73 ~l~~g~~VLdiG~Gs-Gy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~-gD~~~~~~~~~~  150 (224)
T d1i1na_          73 QLHEGAKALDVGSGS-GILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVV-GDGRMGYAEEAP  150 (224)
T ss_dssp             TSCTTCEEEEETCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEE-SCGGGCCGGGCC
T ss_pred             ccCCCCeEEEecCCC-CHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEE-eecccccchhhh
Confidence            458999999999863 7888888887763  8999999988766655433   21       11111 111110111247


Q ss_pred             ccEEEEcCCCCCChHHHHhccccCCeEEEE
Q 018382          245 LDYIIDTVPANHPLEPYLSLLKLDGKLILT  274 (357)
Q Consensus       245 ~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~  274 (357)
                      ||.|+-+.+-.......++.|+++|++|..
T Consensus       151 fD~I~~~~~~~~ip~~l~~~LkpGG~LV~p  180 (224)
T d1i1na_         151 YDAIHVGAAAPVVPQALIDQLKPGGRLILP  180 (224)
T ss_dssp             EEEEEECSBBSSCCHHHHHTEEEEEEEEEE
T ss_pred             hhhhhhhcchhhcCHHHHhhcCCCcEEEEE
Confidence            999988776665667899999999999874

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.35  E-value=0.00095  Score=51.20  Aligned_cols=104  Identities=16%  Similarity=0.188  Sum_probs=77.5

Q ss_pred             hhhhhhc-cCCCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCcc
Q 018382          168 VFSPLSH-FGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLD  246 (357)
Q Consensus       168 a~~~l~~-~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d  246 (357)
                      .+.++.+ ....-.|++|+|.|-|-+|...++.++.+|++|+++...+.+.-++.- .|.. +.      .+++.....|
T Consensus        10 ~~~~~~r~t~~~l~Gk~v~V~GyG~iG~g~A~~~rg~G~~V~v~e~dp~~al~A~~-dG~~-v~------~~~~a~~~ad   81 (163)
T d1li4a1          10 LIDGIKRATDVMIAGKVAVVAGYGDVGKGCAQALRGFGARVIITEIDPINALQAAM-EGYE-VT------TMDEACQEGN   81 (163)
T ss_dssp             HHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-TTCE-EC------CHHHHTTTCS
T ss_pred             HHHHHHHHhCceecCCEEEEeccccccHHHHHHHHhCCCeeEeeecccchhHHhhc-CceE-ee------ehhhhhhhcc
Confidence            3444433 444468999999999999999999999999999999998766444433 3532 21      2445566789


Q ss_pred             EEEEcCCCCCC-hHHHHhccccCCeEEEEccCCC
Q 018382          247 YIIDTVPANHP-LEPYLSLLKLDGKLILTGVINT  279 (357)
Q Consensus       247 ~v~d~~g~~~~-~~~~~~~l~~~G~~v~~g~~~~  279 (357)
                      +++-++|.... -...++.|+++-.+..+|....
T Consensus        82 ivvtaTGn~~vI~~eh~~~MKdgaIL~N~Ghfd~  115 (163)
T d1li4a1          82 IFVTTTGCIDIILGRHFEQMKDDAIVCNIGHFDV  115 (163)
T ss_dssp             EEEECSSCSCSBCHHHHTTCCTTEEEEECSSSTT
T ss_pred             EEEecCCCccchhHHHHHhccCCeEEEEeccccc
Confidence            99999998644 4578899999999988876543

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.34  E-value=0.00034  Score=59.17  Aligned_cols=77  Identities=23%  Similarity=0.221  Sum_probs=54.1

Q ss_pred             CCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh----cCCcEE---EcCCChhHHH-------HhhC
Q 018382          179 QSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH----LGADQY---LVSSDATRMQ-------EAAD  243 (357)
Q Consensus       179 ~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~----~g~~~v---v~~~~~~~~~-------~~~~  243 (357)
                      -+|+++||+|+ +++|++.++.+...|++|+++++++++.+.+.++    .+....   .+..+....+       ...+
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g   91 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMG   91 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHhC
Confidence            36899999987 9999999999999999999999999887766542    333221   2333332222       2234


Q ss_pred             CccEEEEcCCCC
Q 018382          244 SLDYIIDTVPAN  255 (357)
Q Consensus       244 ~~d~v~d~~g~~  255 (357)
                      ..|+++++.|..
T Consensus        92 ~~~~li~nag~~  103 (269)
T d1xu9a_          92 GLDMLILNHITN  103 (269)
T ss_dssp             SCSEEEECCCCC
T ss_pred             Cccccccccccc
Confidence            789999877653

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=97.32  E-value=0.00024  Score=59.92  Aligned_cols=75  Identities=17%  Similarity=0.252  Sum_probs=55.2

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc---CC------cEEEcCCChhHHHHhh-------
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL---GA------DQYLVSSDATRMQEAA-------  242 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~---g~------~~vv~~~~~~~~~~~~-------  242 (357)
                      +|+.+||+|+ +++|.+.++.+...|++|+++.+++++.+.+.+++   |.      ....|..+++.++++.       
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~   83 (264)
T d1spxa_           4 AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKF   83 (264)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence            6788999987 99999999999999999999999988876665432   21      1124666654444332       


Q ss_pred             CCccEEEEcCCC
Q 018382          243 DSLDYIIDTVPA  254 (357)
Q Consensus       243 ~~~d~v~d~~g~  254 (357)
                      +++|++++++|.
T Consensus        84 g~iDilvnnAG~   95 (264)
T d1spxa_          84 GKLDILVNNAGA   95 (264)
T ss_dssp             SCCCEEEECCC-
T ss_pred             CCCCEeeccccc
Confidence            479999999874

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=97.32  E-value=0.00016  Score=60.99  Aligned_cols=76  Identities=18%  Similarity=0.166  Sum_probs=55.9

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHH----HhcCCcE---EEcCCChhHHHHhh-------CC
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAM----EHLGADQ---YLVSSDATRMQEAA-------DS  244 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~----~~~g~~~---vv~~~~~~~~~~~~-------~~  244 (357)
                      +|+++||+|+ +++|.+.++.+...|++|+++.+++++...+.    +++|.+.   ..|..+++.++++.       ++
T Consensus         8 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   87 (260)
T d1h5qa_           8 VNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGP   87 (260)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            5789999987 99999999999999999999999887654433    3356432   34666655443332       37


Q ss_pred             ccEEEEcCCCC
Q 018382          245 LDYIIDTVPAN  255 (357)
Q Consensus       245 ~d~v~d~~g~~  255 (357)
                      +|++++++|..
T Consensus        88 iDilVnnAg~~   98 (260)
T d1h5qa_          88 ISGLIANAGVS   98 (260)
T ss_dssp             EEEEEECCCCC
T ss_pred             CcEeccccccc
Confidence            99999998753

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.31  E-value=0.0011  Score=49.34  Aligned_cols=73  Identities=18%  Similarity=0.162  Sum_probs=59.5

Q ss_pred             eEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEE-cCCChhHHHHhh-CCccEEEEcCCCC
Q 018382          183 RGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYL-VSSDATRMQEAA-DSLDYIIDTVPAN  255 (357)
Q Consensus       183 ~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv-~~~~~~~~~~~~-~~~d~v~d~~g~~  255 (357)
                      +|+|.|+|.+|...++.+...|.+|++++.++++.+.+.++++...+. |..+++.+++.. ..+|.++-++...
T Consensus         2 ~IvI~G~G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~~~~vi~Gd~~~~~~l~~~~i~~a~~vv~~t~~d   76 (132)
T d1lssa_           2 YIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGKE   76 (132)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSCH
T ss_pred             EEEEECCCHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhhhhhhccCcccchhhhhhcChhhhhhhcccCCcH
Confidence            588999999999999999999999999999999998887767765433 455666666664 4799999887775

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.31  E-value=0.00038  Score=58.33  Aligned_cols=75  Identities=21%  Similarity=0.345  Sum_probs=52.6

Q ss_pred             CCCeEEEEec-C--hHHHHHHHHHHHcCCeEEEEeCCcHHHHHH---HHhcCCcEE--EcCCChhHHHHh-------hCC
Q 018382          180 SGLRGGILGL-G--GVGHMGVLIAKAMGHHVTVISSSDKKRVEA---MEHLGADQY--LVSSDATRMQEA-------ADS  244 (357)
Q Consensus       180 ~~~~VlI~G~-g--~~G~~ai~la~~~g~~V~~~~~~~~~~~~~---~~~~g~~~v--v~~~~~~~~~~~-------~~~  244 (357)
                      +|+++||+|+ |  ++|.+.++.+...|++|+++.++++..+.+   .+..+....  .|..+++.++++       .++
T Consensus         7 ~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   86 (256)
T d1ulua_           7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFGG   86 (256)
T ss_dssp             TTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHHhcCC
Confidence            6899999987 5  799999999988999999999887644333   232343333  355555443332       247


Q ss_pred             ccEEEEcCCC
Q 018382          245 LDYIIDTVPA  254 (357)
Q Consensus       245 ~d~v~d~~g~  254 (357)
                      +|++++++|.
T Consensus        87 iDilVnnag~   96 (256)
T d1ulua_          87 LDYLVHAIAF   96 (256)
T ss_dssp             EEEEEECCCC
T ss_pred             ceEEEecccc
Confidence            9999998875

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.30  E-value=0.00046  Score=59.35  Aligned_cols=76  Identities=17%  Similarity=0.183  Sum_probs=52.3

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCC---------cHHHHHHHHh---cCCcEEEcCCChhH----HHHh-
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSS---------DKKRVEAMEH---LGADQYLVSSDATR----MQEA-  241 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~---------~~~~~~~~~~---~g~~~vv~~~~~~~----~~~~-  241 (357)
                      +|+++||+|+ +++|.+.++.+...|++|++.+++         ++..+.+.+.   .+.....+..+.+.    ++.+ 
T Consensus         6 ~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~   85 (302)
T d1gz6a_           6 DGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTAL   85 (302)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHH
Confidence            5889999987 999999999999999999998543         3333333322   34445556555433    2222 


Q ss_pred             --hCCccEEEEcCCCC
Q 018382          242 --ADSLDYIIDTVPAN  255 (357)
Q Consensus       242 --~~~~d~v~d~~g~~  255 (357)
                        .+++|++++++|..
T Consensus        86 ~~~G~iDiLVnNAGi~  101 (302)
T d1gz6a_          86 DTFGRIDVVVNNAGIL  101 (302)
T ss_dssp             HHTSCCCEEEECCCCC
T ss_pred             HHcCCCCEEEECCccC
Confidence              24799999998864

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.29  E-value=0.00024  Score=59.72  Aligned_cols=76  Identities=17%  Similarity=0.166  Sum_probs=55.6

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc---CCc---EEEcCCChhHHH----Hhh----CC
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL---GAD---QYLVSSDATRMQ----EAA----DS  244 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~---g~~---~vv~~~~~~~~~----~~~----~~  244 (357)
                      +|+++||+|+ +++|.+.++.+...|++|+++.+++++.+.+.+++   +..   ...|..+++.++    ++.    +.
T Consensus         7 kgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~   86 (259)
T d1xq1a_           7 KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGK   86 (259)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHhCCC
Confidence            5899999987 99999999999999999999999988877665433   222   234555544332    221    35


Q ss_pred             ccEEEEcCCCC
Q 018382          245 LDYIIDTVPAN  255 (357)
Q Consensus       245 ~d~v~d~~g~~  255 (357)
                      +|++++++|..
T Consensus        87 idilvnnAG~~   97 (259)
T d1xq1a_          87 LDILINNLGAI   97 (259)
T ss_dssp             CSEEEEECCC-
T ss_pred             ccccccccccc
Confidence            89999998864

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=97.29  E-value=0.00034  Score=59.92  Aligned_cols=76  Identities=18%  Similarity=0.195  Sum_probs=55.8

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHH----hcCCcE-E--EcCCChhHHHHh-------hCC
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAME----HLGADQ-Y--LVSSDATRMQEA-------ADS  244 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~----~~g~~~-v--v~~~~~~~~~~~-------~~~  244 (357)
                      +|+++||+|+ +++|.+.++.+...|++|+++.+++++.+.+.+    +.|... .  .|..+.+.+++.       .++
T Consensus        24 ~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~  103 (294)
T d1w6ua_          24 QGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGH  103 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhhccc
Confidence            5799999986 999999999999999999999999877654433    345332 2  355555443332       247


Q ss_pred             ccEEEEcCCCC
Q 018382          245 LDYIIDTVPAN  255 (357)
Q Consensus       245 ~d~v~d~~g~~  255 (357)
                      +|++++++|..
T Consensus       104 iDilvnnAg~~  114 (294)
T d1w6ua_         104 PNIVINNAAGN  114 (294)
T ss_dssp             CSEEEECCCCC
T ss_pred             cchhhhhhhhc
Confidence            99999998864

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=97.29  E-value=0.00025  Score=60.16  Aligned_cols=75  Identities=20%  Similarity=0.321  Sum_probs=55.6

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCC--c----EEEcCCChhHHHHh----h---
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGA--D----QYLVSSDATRMQEA----A---  242 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~--~----~vv~~~~~~~~~~~----~---  242 (357)
                      +|+++||+|+ +++|.+.++.+...|++|+++++++++.+.+.++   .|.  .    ...|..+++.++++    .   
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   82 (274)
T d1xhla_           3 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKF   82 (274)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHHc
Confidence            5889999987 9999999999999999999999998877665443   331  1    23466665544333    2   


Q ss_pred             CCccEEEEcCCC
Q 018382          243 DSLDYIIDTVPA  254 (357)
Q Consensus       243 ~~~d~v~d~~g~  254 (357)
                      +.+|++++++|.
T Consensus        83 G~iDilVnnAG~   94 (274)
T d1xhla_          83 GKIDILVNNAGA   94 (274)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCceEEEeeccc
Confidence            379999999874

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=97.28  E-value=0.00057  Score=56.91  Aligned_cols=76  Identities=13%  Similarity=0.102  Sum_probs=55.8

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcH-HHHHHHHhcCCcE---EEcCCChhHHHHh-------hCCccE
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDK-KRVEAMEHLGADQ---YLVSSDATRMQEA-------ADSLDY  247 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~-~~~~~~~~~g~~~---vv~~~~~~~~~~~-------~~~~d~  247 (357)
                      +|+++||+|+ +++|.+.++.+...|++|+++.++++ ..+...+..|...   ..|..+++.++++       .+++|+
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~iDi   83 (247)
T d2ew8a1           4 KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDI   83 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5789999987 99999999999999999999998654 3444445577432   3466665544433       247999


Q ss_pred             EEEcCCCC
Q 018382          248 IIDTVPAN  255 (357)
Q Consensus       248 v~d~~g~~  255 (357)
                      +++++|..
T Consensus        84 lVnnAG~~   91 (247)
T d2ew8a1          84 LVNNAGIY   91 (247)
T ss_dssp             EEECCCCC
T ss_pred             EEECCCCC
Confidence            99998874

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.23  E-value=0.0013  Score=55.56  Aligned_cols=97  Identities=19%  Similarity=0.203  Sum_probs=66.4

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcH-HHHHHH---HhcCCcEE---EcCCChhHHHHh-------hCC
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDK-KRVEAM---EHLGADQY---LVSSDATRMQEA-------ADS  244 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~-~~~~~~---~~~g~~~v---v~~~~~~~~~~~-------~~~  244 (357)
                      +|+++||+|+ +++|.+.++.+...|++|+++.++.+ ..+.+.   ++.|.+..   .|..+++.+.+.       .++
T Consensus        17 ~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   96 (272)
T d1g0oa_          17 EGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGK   96 (272)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHhCC
Confidence            5799999987 99999999999999999999887644 323222   22554332   355554433332       247


Q ss_pred             ccEEEEcCCCC-------------------------CChHHHHhccccCCeEEEEcc
Q 018382          245 LDYIIDTVPAN-------------------------HPLEPYLSLLKLDGKLILTGV  276 (357)
Q Consensus       245 ~d~v~d~~g~~-------------------------~~~~~~~~~l~~~G~~v~~g~  276 (357)
                      +|+++++++..                         ...+.+...|.+.|+++.+..
T Consensus        97 idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s  153 (272)
T d1g0oa_          97 LDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGS  153 (272)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECC
T ss_pred             CCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccccccccccc
Confidence            99999988764                         134456667788888887754

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.22  E-value=0.0002  Score=57.90  Aligned_cols=74  Identities=18%  Similarity=0.104  Sum_probs=56.8

Q ss_pred             CCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEE-EcCCChhHHHHhhCCccEEEEcCCCC
Q 018382          181 GLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQY-LVSSDATRMQEAADSLDYIIDTVPAN  255 (357)
Q Consensus       181 ~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~v-v~~~~~~~~~~~~~~~d~v~d~~g~~  255 (357)
                      .++|+|+|+ |.+|..+++.+...|.+|++++|+.++...... .+.+.+ .|..+.+.+.+...+.|+||.++|..
T Consensus         3 ~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~~~-~~~~~~~gD~~d~~~l~~al~~~d~vi~~~g~~   78 (205)
T d1hdoa_           3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGP-RPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTR   78 (205)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSC-CCSEEEESCTTSHHHHHHHHTTCSEEEECCCCT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccccc-cccccccccccchhhHHHHhcCCCEEEEEeccC
Confidence            478999997 999999999888889999999998887543322 334332 36666777777778999999998763

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.21  E-value=0.00055  Score=57.42  Aligned_cols=97  Identities=23%  Similarity=0.249  Sum_probs=65.5

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHH-HHHHH---HhcCCcE---EEcCCChhHHHH----h---hCC
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKK-RVEAM---EHLGADQ---YLVSSDATRMQE----A---ADS  244 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~-~~~~~---~~~g~~~---vv~~~~~~~~~~----~---~~~  244 (357)
                      .|+++||+|+ +++|.+.++.+...|++|+++.+++++ .+.+.   ++.|.+.   ..|..+++.++.    +   .++
T Consensus         5 ~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   84 (259)
T d1ja9a_           5 AGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGG   84 (259)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHcCC
Confidence            5899999987 999999999999999999987655443 33332   2356443   235555443333    2   237


Q ss_pred             ccEEEEcCCCC-------------------------CChHHHHhccccCCeEEEEcc
Q 018382          245 LDYIIDTVPAN-------------------------HPLEPYLSLLKLDGKLILTGV  276 (357)
Q Consensus       245 ~d~v~d~~g~~-------------------------~~~~~~~~~l~~~G~~v~~g~  276 (357)
                      +|++++++|..                         ...+.++..|+++|.++.+..
T Consensus        85 idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s  141 (259)
T d1ja9a_          85 LDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSS  141 (259)
T ss_dssp             EEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECC
T ss_pred             CcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCccccccc
Confidence            99999998874                         133455667778887776643

>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein Ta0852
species: Thermoplasma acidophilum [TaxId: 2303]

Probab=97.15  E-value=0.00019  Score=59.80  Aligned_cols=101  Identities=21%  Similarity=0.271  Sum_probs=66.0

Q ss_pred             hhccCCCCCCCeEEEEecChHHHHHHHHHHHcC--CeEEEEeCCcHHHHHHHHhc---C-CcEE-EcCCChhHHHHhh-C
Q 018382          172 LSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMG--HHVTVISSSDKKRVEAMEHL---G-ADQY-LVSSDATRMQEAA-D  243 (357)
Q Consensus       172 l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g--~~V~~~~~~~~~~~~~~~~~---g-~~~v-v~~~~~~~~~~~~-~  243 (357)
                      +..++. +||++||=.|+|. |.+++.+|+..|  .+|+.++.+++..+.+++++   + .+.+ +...+  ..+... .
T Consensus        78 i~~l~i-~pG~rVLEiG~Gs-G~lt~~la~~v~~~g~V~~vD~~e~~~~~A~~n~~~~~~~~nv~~~~~D--i~~~~~~~  153 (250)
T d1yb2a1          78 IMRCGL-RPGMDILEVGVGS-GNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSD--IADFISDQ  153 (250)
T ss_dssp             ---CCC-CTTCEEEEECCTT-SHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSC--TTTCCCSC
T ss_pred             HHHcCC-CCcCEEEEeeeeC-cHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHhcCCCceEEEEee--eecccccc
Confidence            334444 9999999998754 666777888765  48999999998887777643   2 2221 11222  111122 3


Q ss_pred             CccEEEEcCCC-CCChHHHHhccccCCeEEEEcc
Q 018382          244 SLDYIIDTVPA-NHPLEPYLSLLKLDGKLILTGV  276 (357)
Q Consensus       244 ~~d~v~d~~g~-~~~~~~~~~~l~~~G~~v~~g~  276 (357)
                      .+|.||--... ...++.+.+.|+|+|+++.+..
T Consensus       154 ~fD~V~ld~p~p~~~l~~~~~~LKpGG~lv~~~P  187 (250)
T d1yb2a1         154 MYDAVIADIPDPWNHVQKIASMMKPGSVATFYLP  187 (250)
T ss_dssp             CEEEEEECCSCGGGSHHHHHHTEEEEEEEEEEES
T ss_pred             eeeeeeecCCchHHHHHHHHHhcCCCceEEEEeC
Confidence            69988744433 4467889999999999987644

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=97.15  E-value=0.00054  Score=53.61  Aligned_cols=100  Identities=17%  Similarity=0.132  Sum_probs=66.0

Q ss_pred             hhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCC---cEEEcCCChhHHHHhhCCccE
Q 018382          171 PLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGA---DQYLVSSDATRMQEAADSLDY  247 (357)
Q Consensus       171 ~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~---~~vv~~~~~~~~~~~~~~~d~  247 (357)
                      +|.......++++|+|+|+|+.+.+++..+...+.+|+++.|+.++.+.+.+.++.   ...+...     ......+|+
T Consensus         8 ~l~~~~~~~~~k~vlIlGaGGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~-----~~~~~~~di   82 (171)
T d1p77a1           8 DLQRLNWLRPNQHVLILGAGGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSMD-----SIPLQTYDL   82 (171)
T ss_dssp             HHHHTTCCCTTCEEEEECCSHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGG-----GCCCSCCSE
T ss_pred             HHHHcCCCCCCCEEEEECCcHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhccccchhhhc-----cccccccce
Confidence            34444443578999999999999999888887677999999999998888776652   1222111     112347999


Q ss_pred             EEEcCCCCCChHH----HHhccccCCeEEEEcc
Q 018382          248 IIDTVPANHPLEP----YLSLLKLDGKLILTGV  276 (357)
Q Consensus       248 v~d~~g~~~~~~~----~~~~l~~~G~~v~~g~  276 (357)
                      +++|+... ....    ..+.++++..++++-.
T Consensus        83 iIN~tp~g-~~~~~~~~~~~~~~~~~~~~D~vy  114 (171)
T d1p77a1          83 VINATSAG-LSGGTASVDAEILKLGSAFYDMQY  114 (171)
T ss_dssp             EEECCCC--------CCCHHHHHHCSCEEESCC
T ss_pred             eeeccccc-ccccccchhhhhhcccceeeeeec
Confidence            99998764 1111    2234556677766644

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=97.12  E-value=0.0007  Score=47.07  Aligned_cols=83  Identities=20%  Similarity=0.111  Sum_probs=53.3

Q ss_pred             CCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHH--HHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCCC
Q 018382          180 SGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKK--RVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHP  257 (357)
Q Consensus       180 ~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~--~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~  257 (357)
                      +|++|+|+|.|..|+++++++...|++|++.+.++..  .+.+.  -+....+...+...+    ..+|.++-+.|-+ .
T Consensus         4 ~~K~v~ViGlG~sG~s~a~~L~~~g~~v~~~D~~~~~~~~~~~~--~~~~~~~~~~~~~~~----~~~d~vi~SPGi~-~   76 (93)
T d2jfga1           4 QGKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLP--EAVERHTGSLNDEWL----MAADLIVASPGIA-L   76 (93)
T ss_dssp             TTCCEEEECCSHHHHHHHHHHHHTTCCCEEEESSSSCTTGGGSC--TTSCEEESBCCHHHH----HHCSEEEECTTSC-T
T ss_pred             CCCEEEEEeECHHHHHHHHHHHHCCCEEEEeeCCcCchhHHHHh--hccceeecccchhhh----ccCCEEEECCCCC-C
Confidence            5789999999999999999999999999999875542  22211  123333333332222    3578888877766 3


Q ss_pred             hHHHHhccccCC
Q 018382          258 LEPYLSLLKLDG  269 (357)
Q Consensus       258 ~~~~~~~l~~~G  269 (357)
                      -+..++..+..|
T Consensus        77 ~~~~~~~a~~~g   88 (93)
T d2jfga1          77 AHPSLSAAADAG   88 (93)
T ss_dssp             TSHHHHHHHHTT
T ss_pred             CCHHHHHHHHcC
Confidence            344444443333

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=97.12  E-value=0.0012  Score=51.78  Aligned_cols=84  Identities=21%  Similarity=0.168  Sum_probs=59.8

Q ss_pred             CCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEc-------CCC--hhHHHHhhCCccEEEEc
Q 018382          181 GLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLV-------SSD--ATRMQEAADSLDYIIDT  251 (357)
Q Consensus       181 ~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~-------~~~--~~~~~~~~~~~d~v~d~  251 (357)
                      .+++.|+|+|.+|++++..+...|.+|++.++++++.+.+.+ .+......       ...  ....++....+|++|-+
T Consensus         1 sk~iaIiGaG~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~aD~iii~   79 (184)
T d1bg6a2           1 SKTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQD-RGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIV   79 (184)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-HTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEEC
T ss_pred             CCEEEEECccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-cCCCchhhhhhhhhhhhhhhhhhhHhHhcCCCEEEEE
Confidence            368999999999999999999999999999999888887776 44221110       000  12245556689999999


Q ss_pred             CCCCCChHHHHhccc
Q 018382          252 VPANHPLEPYLSLLK  266 (357)
Q Consensus       252 ~g~~~~~~~~~~~l~  266 (357)
                      +... ..+..++.++
T Consensus        80 v~~~-~~~~~~~~i~   93 (184)
T d1bg6a2          80 VPAI-HHASIAANIA   93 (184)
T ss_dssp             SCGG-GHHHHHHHHG
T ss_pred             Echh-HHHHHHHHhh
Confidence            8876 4555444333

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=97.10  E-value=0.00068  Score=56.71  Aligned_cols=74  Identities=18%  Similarity=0.196  Sum_probs=53.5

Q ss_pred             CeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCCcE---EEcCCChhHHHHh-------hCCccE
Q 018382          182 LRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGADQ---YLVSSDATRMQEA-------ADSLDY  247 (357)
Q Consensus       182 ~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~~~---vv~~~~~~~~~~~-------~~~~d~  247 (357)
                      +.+||+|+ +++|++.++.+...|++|+++++++++.+.+.++   .|.+.   ..|..+++.++++       .+++|+
T Consensus         2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   81 (255)
T d1gega_           2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDV   81 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCE
T ss_pred             CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCccE
Confidence            34588887 9999999988888899999999998887655432   45332   2466665443333       247999


Q ss_pred             EEEcCCCC
Q 018382          248 IIDTVPAN  255 (357)
Q Consensus       248 v~d~~g~~  255 (357)
                      +++++|..
T Consensus        82 lVnnAG~~   89 (255)
T d1gega_          82 IVNNAGVA   89 (255)
T ss_dssp             EEECCCCC
T ss_pred             EEeccccc
Confidence            99998764

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.06  E-value=0.00071  Score=55.81  Aligned_cols=72  Identities=13%  Similarity=0.090  Sum_probs=52.5

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEE-EcCCC-hhHHHHhhCCccEEEEcCCCC
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQY-LVSSD-ATRMQEAADSLDYIIDTVPAN  255 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~v-v~~~~-~~~~~~~~~~~d~v~d~~g~~  255 (357)
                      +|+++||+|+ +++|.+.++.+...|++|+++++++++.+   + .+...+ .|.++ .+.+.+..+.+|++++++|..
T Consensus         3 kgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~---~-~~~~~~~~Dv~~~~~~~~~~~g~iD~lVnnAG~~   77 (234)
T d1o5ia_           3 RDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLK---R-SGHRYVVCDLRKDLDLLFEKVKEVDILVLNAGGP   77 (234)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH---H-TCSEEEECCTTTCHHHHHHHSCCCSEEEECCCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH---h-cCCcEEEcchHHHHHHHHHHhCCCcEEEeccccc
Confidence            5789999987 99999999999999999999999865543   3 554332 33333 233333445899999998764

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=97.05  E-value=0.00089  Score=56.19  Aligned_cols=76  Identities=16%  Similarity=0.145  Sum_probs=53.7

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcH-HHHHHH---HhcCCcE---EEcCCChhHHHHhh-------CC
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDK-KRVEAM---EHLGADQ---YLVSSDATRMQEAA-------DS  244 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~-~~~~~~---~~~g~~~---vv~~~~~~~~~~~~-------~~  244 (357)
                      +|+++||+|+ +++|.+.++.+...|++|+++.++.+ +.+.+.   ++.|.+.   ..|..+++.++++.       ++
T Consensus         6 ~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~   85 (261)
T d1geea_           6 EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGK   85 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            5789999986 99999999999899999999998754 333222   2356432   23666654444332       37


Q ss_pred             ccEEEEcCCCC
Q 018382          245 LDYIIDTVPAN  255 (357)
Q Consensus       245 ~d~v~d~~g~~  255 (357)
                      +|++++++|..
T Consensus        86 iDiLVnnAG~~   96 (261)
T d1geea_          86 LDVMINNAGLE   96 (261)
T ss_dssp             CCEEEECCCCC
T ss_pred             CCEeeccceec
Confidence            99999998774

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=96.96  E-value=0.0014  Score=54.25  Aligned_cols=73  Identities=16%  Similarity=0.117  Sum_probs=51.6

Q ss_pred             eEEEEec-ChHHHHHHHHHHHcCCe-------EEEEeCCcHHHHHHHHh---cCCcE---EEcCCChhHHHHh-------
Q 018382          183 RGGILGL-GGVGHMGVLIAKAMGHH-------VTVISSSDKKRVEAMEH---LGADQ---YLVSSDATRMQEA-------  241 (357)
Q Consensus       183 ~VlI~G~-g~~G~~ai~la~~~g~~-------V~~~~~~~~~~~~~~~~---~g~~~---vv~~~~~~~~~~~-------  241 (357)
                      .|||+|+ +++|++.+..+...|++       |+...+++++.+.+.++   .|...   ..|..+++.++++       
T Consensus         3 VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~   82 (240)
T d2bd0a1           3 ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVER   82 (240)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             EEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            4688887 99999999888888987       88889988877665443   34322   2366665443332       


Q ss_pred             hCCccEEEEcCCCC
Q 018382          242 ADSLDYIIDTVPAN  255 (357)
Q Consensus       242 ~~~~d~v~d~~g~~  255 (357)
                      .+.+|++++++|..
T Consensus        83 ~g~iDilvnnAg~~   96 (240)
T d2bd0a1          83 YGHIDCLVNNAGVG   96 (240)
T ss_dssp             TSCCSEEEECCCCC
T ss_pred             cCCcceeecccccc
Confidence            23799999998764

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=96.96  E-value=0.0012  Score=54.75  Aligned_cols=95  Identities=17%  Similarity=0.162  Sum_probs=62.2

Q ss_pred             eEEEEec-ChHHHHHHHHHHHcCCeEEEEeC-CcHHHHHHHH---hcCCc---EEEcCCChhHHHHh-------hCCccE
Q 018382          183 RGGILGL-GGVGHMGVLIAKAMGHHVTVISS-SDKKRVEAME---HLGAD---QYLVSSDATRMQEA-------ADSLDY  247 (357)
Q Consensus       183 ~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~-~~~~~~~~~~---~~g~~---~vv~~~~~~~~~~~-------~~~~d~  247 (357)
                      .+||+|+ +++|++.++.+...|++|++.+. ++++.+.+.+   .+|.+   ...|..+++.++++       .+++|+
T Consensus         3 V~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   82 (244)
T d1edoa_           3 VVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTIDV   82 (244)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCSE
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCCc
Confidence            5677886 99999999999999999998754 4444443332   24532   22466665444333       247999


Q ss_pred             EEEcCCCC-------------------------CChHHHHhcc--ccCCeEEEEccC
Q 018382          248 IIDTVPAN-------------------------HPLEPYLSLL--KLDGKLILTGVI  277 (357)
Q Consensus       248 v~d~~g~~-------------------------~~~~~~~~~l--~~~G~~v~~g~~  277 (357)
                      +++++|..                         ...+.++..|  +.+|+++.++..
T Consensus        83 LVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~  139 (244)
T d1edoa_          83 VVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASV  139 (244)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCT
T ss_pred             cccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcCh
Confidence            99998764                         1233344455  357999998753

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=96.96  E-value=0.0038  Score=47.52  Aligned_cols=96  Identities=20%  Similarity=0.155  Sum_probs=73.8

Q ss_pred             cCCCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCC
Q 018382          175 FGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPA  254 (357)
Q Consensus       175 ~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~  254 (357)
                      ....-.|++++|.|-|-+|.-.++-++.+|++|+++...+-+.-++.- -|.. +.      .+++.....|+++.++|.
T Consensus        17 t~~~laGk~vvV~GYG~vGrG~A~~~rg~Ga~V~V~E~DPi~alqA~m-dGf~-v~------~~~~a~~~aDi~vTaTGn   88 (163)
T d1v8ba1          17 TDFLISGKIVVICGYGDVGKGCASSMKGLGARVYITEIDPICAIQAVM-EGFN-VV------TLDEIVDKGDFFITCTGN   88 (163)
T ss_dssp             HCCCCTTSEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHT-TTCE-EC------CHHHHTTTCSEEEECCSS
T ss_pred             hCceecCCEEEEecccccchhHHHHHHhCCCEEEEEecCchhhHHHHh-cCCc-cC------chhHccccCcEEEEcCCC
Confidence            344468999999999999999999999999999999988755333221 2322 21      245566789999999999


Q ss_pred             CCC-hHHHHhccccCCeEEEEccCC
Q 018382          255 NHP-LEPYLSLLKLDGKLILTGVIN  278 (357)
Q Consensus       255 ~~~-~~~~~~~l~~~G~~v~~g~~~  278 (357)
                      ... -..-++.|+++..+...|-..
T Consensus        89 ~~vI~~~h~~~MKdgaIl~N~GHfd  113 (163)
T d1v8ba1          89 VDVIKLEHLLKMKNNAVVGNIGHFD  113 (163)
T ss_dssp             SSSBCHHHHTTCCTTCEEEECSSTT
T ss_pred             CccccHHHHHHhhCCeEEEeccccc
Confidence            754 457799999999999887654

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.94  E-value=0.0012  Score=54.36  Aligned_cols=92  Identities=20%  Similarity=0.165  Sum_probs=59.6

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCC--hhH-------HHHhh--CCccE
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSD--ATR-------MQEAA--DSLDY  247 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~--~~~-------~~~~~--~~~d~  247 (357)
                      +|++|||+|+ +++|.+.++.+...|++|+.+.+.+.+.      -.....+....  .+.       +....  .++|+
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD~   74 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEE------ASASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDA   74 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTT------SSEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccc------ccccceeecccCcHHHHHHHHHHHHHHhCCCCceE
Confidence            4789999987 9999999999999999999988765431      11111221111  111       11111  25899


Q ss_pred             EEEcCCCC--------------------------CChHHHHhccccCCeEEEEccC
Q 018382          248 IIDTVPAN--------------------------HPLEPYLSLLKLDGKLILTGVI  277 (357)
Q Consensus       248 v~d~~g~~--------------------------~~~~~~~~~l~~~G~~v~~g~~  277 (357)
                      +++++|..                          ...+.+...|+++|+++.++..
T Consensus        75 lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~  130 (236)
T d1dhra_          75 ILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAK  130 (236)
T ss_dssp             EEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCG
T ss_pred             EEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccH
Confidence            99998742                          1223344567889999998754

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.93  E-value=0.00072  Score=56.32  Aligned_cols=74  Identities=14%  Similarity=0.071  Sum_probs=53.5

Q ss_pred             CCeEEEEec-ChHHHHHHHHHHHcCC--eEEEEeCCcHHHHHHHHhcCCc---EEEcCCChhHHHH----hh---C--Cc
Q 018382          181 GLRGGILGL-GGVGHMGVLIAKAMGH--HVTVISSSDKKRVEAMEHLGAD---QYLVSSDATRMQE----AA---D--SL  245 (357)
Q Consensus       181 ~~~VlI~G~-g~~G~~ai~la~~~g~--~V~~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~----~~---~--~~  245 (357)
                      .++|||+|+ +++|+++++.+...|+  +|+.+++++++.+.+++..+..   ..+|..+.+.+++    +.   +  ++
T Consensus         3 ~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~~i   82 (250)
T d1yo6a1           3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGL   82 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGCC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHHHHHhCCCCe
Confidence            378999987 9999999888877786  7888999998888877744432   2235555443332    21   1  49


Q ss_pred             cEEEEcCCC
Q 018382          246 DYIIDTVPA  254 (357)
Q Consensus       246 d~v~d~~g~  254 (357)
                      |++++++|.
T Consensus        83 dilinnAG~   91 (250)
T d1yo6a1          83 SLLINNAGV   91 (250)
T ss_dssp             CEEEECCCC
T ss_pred             EEEEEcCcc
Confidence            999999985

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=96.84  E-value=0.0011  Score=49.42  Aligned_cols=73  Identities=19%  Similarity=0.300  Sum_probs=57.6

Q ss_pred             CeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEE-EcCCChhHHHHhh-CCccEEEEcCCCC
Q 018382          182 LRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQY-LVSSDATRMQEAA-DSLDYIIDTVPAN  255 (357)
Q Consensus       182 ~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~v-v~~~~~~~~~~~~-~~~d~v~d~~g~~  255 (357)
                      ++++|+|.|.+|..+++.+...|.+|++++.++++.+++.+ .|...+ -|..+++.+++.. ..+|.++-++++.
T Consensus         1 k~~iIiG~G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~~-~~~~~~~gd~~~~~~l~~a~i~~a~~vi~~~~~~   75 (134)
T d2hmva1           1 KQFAVIGLGRFGGSIVKELHRMGHEVLAVDINEEKVNAYAS-YATHAVIANATEENELLSLGIRNFEYVIVAIGAN   75 (134)
T ss_dssp             CCEEEECCSHHHHHHHHHHHHTTCCCEEEESCHHHHHHTTT-TCSEEEECCTTCTTHHHHHTGGGCSEEEECCCSC
T ss_pred             CEEEEECCCHHHHHHHHHHHHCCCeEEEecCcHHHHHHHHH-hCCcceeeecccchhhhccCCccccEEEEEcCch
Confidence            35788899999999999999999999999999999888877 675443 3444556666553 4789888877765

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=96.80  E-value=0.0012  Score=55.12  Aligned_cols=76  Identities=9%  Similarity=-0.029  Sum_probs=51.2

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHH---HHhcCCcE----EEcCC-ChhHHHH----h---hC
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEA---MEHLGADQ----YLVSS-DATRMQE----A---AD  243 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~---~~~~g~~~----vv~~~-~~~~~~~----~---~~  243 (357)
                      +|++|||+|+ +++|++.+..+...|++|++++++.++.+.+   ....+..+    ..|.. +.+.+++    +   .+
T Consensus         4 ~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~g   83 (254)
T d1sbya1           4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLK   83 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHHcC
Confidence            5899999987 8999999999999999999998776554333   23233222    23433 2222222    2   24


Q ss_pred             CccEEEEcCCCC
Q 018382          244 SLDYIIDTVPAN  255 (357)
Q Consensus       244 ~~d~v~d~~g~~  255 (357)
                      ++|++++++|..
T Consensus        84 ~iDilvnnAG~~   95 (254)
T d1sbya1          84 TVDILINGAGIL   95 (254)
T ss_dssp             CCCEEEECCCCC
T ss_pred             CCCEEEeCCCCC
Confidence            799999999874

>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=96.79  E-value=0.0035  Score=50.98  Aligned_cols=104  Identities=18%  Similarity=0.149  Sum_probs=62.8

Q ss_pred             hhhcc-CCCCCCCeEEEEecC--hHHHHHHHHHHHcC----CeEEEEeCCcHHHHHHHHhc--------CCcEE-EcCCC
Q 018382          171 PLSHF-GLKQSGLRGGILGLG--GVGHMGVLIAKAMG----HHVTVISSSDKKRVEAMEHL--------GADQY-LVSSD  234 (357)
Q Consensus       171 ~l~~~-~~~~~~~~VlI~G~g--~~G~~ai~la~~~g----~~V~~~~~~~~~~~~~~~~~--------g~~~v-v~~~~  234 (357)
                      ++..+ ..++++++||.+|+|  -....+.+++...|    .+|+.+...++-.+.+++.+        +...+ +...+
T Consensus        70 ~l~~L~~~l~~g~~VLeIGtGsGY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~~~~nv~~~~~d  149 (223)
T d1r18a_          70 ALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGD  149 (223)
T ss_dssp             HHHHTTTTCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESC
T ss_pred             HHHHHhhccCCCCeEEEecCCCCHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhcCccEEEEEecc
Confidence            44443 245899999999863  34444444555545    38999998877655554422        21111 21122


Q ss_pred             hhHHHHhhCCccEEEEcCCCCCChHHHHhccccCCeEEEE
Q 018382          235 ATRMQEAADSLDYIIDTVPANHPLEPYLSLLKLDGKLILT  274 (357)
Q Consensus       235 ~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~  274 (357)
                      ........+.||.|+-+.+-...-+...+.|+++|++|..
T Consensus       150 ~~~~~~~~~~fD~Iiv~~a~~~~p~~l~~~Lk~gG~lV~p  189 (223)
T d1r18a_         150 GRKGYPPNAPYNAIHVGAAAPDTPTELINQLASGGRLIVP  189 (223)
T ss_dssp             GGGCCGGGCSEEEEEECSCBSSCCHHHHHTEEEEEEEEEE
T ss_pred             cccccccccceeeEEEEeechhchHHHHHhcCCCcEEEEE
Confidence            1110112347999987776665667889999999999874

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=96.78  E-value=0.00013  Score=60.57  Aligned_cols=91  Identities=18%  Similarity=0.129  Sum_probs=58.7

Q ss_pred             CCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCC--hh-------HHHHhh--CCccEE
Q 018382          181 GLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSD--AT-------RMQEAA--DSLDYI  248 (357)
Q Consensus       181 ~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~--~~-------~~~~~~--~~~d~v  248 (357)
                      +.+|||+|+ +++|.+.++.+...|++|+++++++++..      .....+....  .+       ......  +.+|++
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD~l   75 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA------DSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGV   75 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS------SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhcc------cccceeccccCchhHHHHHHHHHHHHhcCCCeeEE
Confidence            457899987 99999999999999999999998765311      1111111111  11       111111  368999


Q ss_pred             EEcCCCC--------------------------CChHHHHhccccCCeEEEEccC
Q 018382          249 IDTVPAN--------------------------HPLEPYLSLLKLDGKLILTGVI  277 (357)
Q Consensus       249 ~d~~g~~--------------------------~~~~~~~~~l~~~G~~v~~g~~  277 (357)
                      ++++|..                          ...+..+..|+++|+++.++..
T Consensus        76 innAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~  130 (235)
T d1ooea_          76 FCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAA  130 (235)
T ss_dssp             EECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCG
T ss_pred             EECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccH
Confidence            9998752                          1223445567788999988753

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.72  E-value=0.00056  Score=56.56  Aligned_cols=71  Identities=14%  Similarity=0.106  Sum_probs=52.3

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHh-------hCCccEEEEc
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEA-------ADSLDYIIDT  251 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~-------~~~~d~v~d~  251 (357)
                      .|+++||+|+ +++|.+.++.+...|++|+++.+++++.+.+     .....|..+++.++++       .+++|+++++
T Consensus         6 ~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~-----~~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLVnn   80 (237)
T d1uzma1           6 VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGL-----FGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSN   80 (237)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTS-----EEEECCTTCHHHHHHHHHHHHHHHSSCSEEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchhcCc-----eEEEEecCCHHHHHHHHHHHHHhcCCceEEEee
Confidence            5789999987 9999999999999999999999986653211     1233566665543333       2379999999


Q ss_pred             CCCC
Q 018382          252 VPAN  255 (357)
Q Consensus       252 ~g~~  255 (357)
                      +|..
T Consensus        81 AG~~   84 (237)
T d1uzma1          81 AGLS   84 (237)
T ss_dssp             CSCC
T ss_pred             eccc
Confidence            8763

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=96.71  E-value=0.00093  Score=52.98  Aligned_cols=96  Identities=11%  Similarity=-0.011  Sum_probs=63.2

Q ss_pred             CCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEE-----------------EcCCChhHHHH
Q 018382          178 KQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQY-----------------LVSSDATRMQE  240 (357)
Q Consensus       178 ~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~v-----------------v~~~~~~~~~~  240 (357)
                      +.|+.+||.+|+|. |..++.+|+. |.+|++++.+++..+.+++..+....                 +..+-.+....
T Consensus        18 ~~~~~rvLd~GCG~-G~~a~~la~~-G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~   95 (201)
T d1pjza_          18 VVPGARVLVPLCGK-SQDMSWLSGQ-GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTAR   95 (201)
T ss_dssp             CCTTCEEEETTTCC-SHHHHHHHHH-CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHH
T ss_pred             CCCCCEEEEecCcC-CHHHHHHHHc-CCceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceecccccccccc
Confidence            38999999999863 6777788875 99999999999998888875542110                 00000111112


Q ss_pred             hhCCccEEEEcCCCC--------CChHHHHhccccCCeEEEEc
Q 018382          241 AADSLDYIIDTVPAN--------HPLEPYLSLLKLDGKLILTG  275 (357)
Q Consensus       241 ~~~~~d~v~d~~g~~--------~~~~~~~~~l~~~G~~v~~g  275 (357)
                      ....+|.|++...-.        ..+..+.+.|+++|+++...
T Consensus        96 ~~~~~D~i~~~~~l~~l~~~~~~~~~~~i~~~LkpgG~l~l~~  138 (201)
T d1pjza_          96 DIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLIT  138 (201)
T ss_dssp             HHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEE
T ss_pred             cccceeEEEEEeeeEecchhhhHHHHHHHHHhcCCCcEEEEEE
Confidence            233689988754321        13456778899999976543

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=96.67  E-value=0.0023  Score=53.27  Aligned_cols=72  Identities=13%  Similarity=0.056  Sum_probs=50.3

Q ss_pred             eEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHH---hcCCcEEEcCCCh-hHHHHh---hCCccEEEEcCCC
Q 018382          183 RGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAME---HLGADQYLVSSDA-TRMQEA---ADSLDYIIDTVPA  254 (357)
Q Consensus       183 ~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~---~~g~~~vv~~~~~-~~~~~~---~~~~d~v~d~~g~  254 (357)
                      ++||+|+ +++|++.++.+...|++|++..++.++.+++..   .+....+.+..+. ..++++   .+++|++++++|.
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~~~~~~G~iDiLVnNAg~   81 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSNDIF   81 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEECCCCSHHHHHHHHHHHHSCCCEEEEECCC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhhCcEEEeccCCHHHHHHHHHHHHHHcCCCCEEEECCcC
Confidence            6789987 899999999888999999999988777666544   2333333343332 233333   2489999988764

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.67  E-value=0.0028  Score=52.44  Aligned_cols=48  Identities=19%  Similarity=0.243  Sum_probs=42.7

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCc
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGAD  227 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~  227 (357)
                      +|+++||+|+ +++|.+.++.+...|++|+++++++++.+.+.++++..
T Consensus         4 kGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~   52 (248)
T d2o23a1           4 KGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNN   52 (248)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCC
Confidence            6899999987 99999999999999999999999998888777778753

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=96.57  E-value=0.0035  Score=47.67  Aligned_cols=86  Identities=22%  Similarity=0.281  Sum_probs=66.1

Q ss_pred             eEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCCChHHHH
Q 018382          183 RGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPYL  262 (357)
Q Consensus       183 ~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~  262 (357)
                      ++.++|+|.+|.+++.-+...|.++++..++.++.+.+.+++|....-   +   ..++....|+||-|+-.. .++..+
T Consensus         2 kIg~IG~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~g~~~~~---~---~~~~~~~~dvIilavkp~-~~~~vl   74 (152)
T d2ahra2           2 KIGIIGVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPYAM---S---HQDLIDQVDLVILGIKPQ-LFETVL   74 (152)
T ss_dssp             EEEEECCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCBCS---S---HHHHHHTCSEEEECSCGG-GHHHHH
T ss_pred             EEEEEeccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhccccceeeec---h---hhhhhhccceeeeecchH-hHHHHh
Confidence            477889999999988877777889999999999888887768864321   1   233445799999988655 778888


Q ss_pred             hccccCCeEEEEc
Q 018382          263 SLLKLDGKLILTG  275 (357)
Q Consensus       263 ~~l~~~G~~v~~g  275 (357)
                      +.+.++-.++.+.
T Consensus        75 ~~l~~~~~iis~~   87 (152)
T d2ahra2          75 KPLHFKQPIISMA   87 (152)
T ss_dssp             TTSCCCSCEEECC
T ss_pred             hhcccceeEeccc
Confidence            8888887777653

>d1o54a_ c.66.1.13 (A:) Hypothetical protein TM0748 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein TM0748
species: Thermotoga maritima [TaxId: 2336]

Probab=96.56  E-value=0.002  Score=53.97  Aligned_cols=101  Identities=19%  Similarity=0.194  Sum_probs=68.8

Q ss_pred             hhhccCCCCCCCeEEEEecChHHHHHHHHHHHcC--CeEEEEeCCcHHHHHHHHh---cCC--cEEEcCCChhHHHHhh-
Q 018382          171 PLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMG--HHVTVISSSDKKRVEAMEH---LGA--DQYLVSSDATRMQEAA-  242 (357)
Q Consensus       171 ~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g--~~V~~~~~~~~~~~~~~~~---~g~--~~vv~~~~~~~~~~~~-  242 (357)
                      .+..++. +||++||=.|+|. |..++.+|+..+  .+|+.++.+++..+.+++.   +|.  ...+...+.  ..... 
T Consensus        95 Ii~~l~i-~pG~~VLDiG~Gs-G~lt~~lA~~~~~~G~V~~vD~~~~~~~~A~~~~~~~g~~~~v~~~~~d~--~~~~~~  170 (266)
T d1o54a_          95 IAMMLDV-KEGDRIIDTGVGS-GAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDI--SEGFDE  170 (266)
T ss_dssp             HHHHTTC-CTTCEEEEECCTT-SHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCG--GGCCSC
T ss_pred             HHHhhCC-CCCCEEEECCCCC-CHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhccccCcEEEeccc--cccccc
Confidence            3444454 9999999999864 677778888875  5999999999877666553   453  222223321  11121 


Q ss_pred             CCccEEEEcCCC-CCChHHHHhccccCCeEEEEc
Q 018382          243 DSLDYIIDTVPA-NHPLEPYLSLLKLDGKLILTG  275 (357)
Q Consensus       243 ~~~d~v~d~~g~-~~~~~~~~~~l~~~G~~v~~g  275 (357)
                      ..+|.||--... ...++.+.+.|+|+|+++.+.
T Consensus       171 ~~~D~V~~d~p~p~~~l~~~~~~LKpGG~lv~~~  204 (266)
T d1o54a_         171 KDVDALFLDVPDPWNYIDKCWEALKGGGRFATVC  204 (266)
T ss_dssp             CSEEEEEECCSCGGGTHHHHHHHEEEEEEEEEEE
T ss_pred             cceeeeEecCCCHHHHHHHHHhhcCCCCEEEEEe
Confidence            268888765555 346789999999999998764

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.54  E-value=0.0032  Score=51.11  Aligned_cols=72  Identities=17%  Similarity=0.065  Sum_probs=51.8

Q ss_pred             CeEEEEec-ChHHHHHHHHHHHcCC--eEEEEeCCcHHHHHHHHhcCCcE-EEcCCChhHHHHhhCCccEEEEcCCCC
Q 018382          182 LRGGILGL-GGVGHMGVLIAKAMGH--HVTVISSSDKKRVEAMEHLGADQ-YLVSSDATRMQEAADSLDYIIDTVPAN  255 (357)
Q Consensus       182 ~~VlI~G~-g~~G~~ai~la~~~g~--~V~~~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~~~~d~v~d~~g~~  255 (357)
                      .+|||+|+ |.+|..++..+...|.  .|+...+++++...+..  +... ..|..+.+...+...++|.|+.+++..
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~   79 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGG--EADVFIGDITDADSINPAFQGIDALVILTSAV   79 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHTTC--CTTEEECCTTSHHHHHHHHTTCSEEEECCCCC
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhccC--CcEEEEeeeccccccccccccceeeEEEEeec
Confidence            58999987 9999999999988885  56667777665543322  3332 345566666777778999999987653

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=96.53  E-value=0.0027  Score=52.82  Aligned_cols=93  Identities=20%  Similarity=0.267  Sum_probs=61.2

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCC-cEEEcCCChhHHHHh-hCCccEEEEcCC
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGA-DQYLVSSDATRMQEA-ADSLDYIIDTVP  253 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~-~~vv~~~~~~~~~~~-~~~~d~v~d~~g  253 (357)
                      ++|++||=+|+|. |..++.+++ .|++|++++.++...+.++++   -|. ..++..+..   ... .+.||+|+....
T Consensus       119 ~~g~~VLDiGcGs-G~l~i~aa~-~g~~V~gvDis~~av~~A~~na~~n~~~~~~~~~d~~---~~~~~~~fD~V~ani~  193 (254)
T d2nxca1         119 RPGDKVLDLGTGS-GVLAIAAEK-LGGKALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLE---AALPFGPFDLLVANLY  193 (254)
T ss_dssp             CTTCEEEEETCTT-SHHHHHHHH-TTCEEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHH---HHGGGCCEEEEEEECC
T ss_pred             CccCEEEEcccch-hHHHHHHHh-cCCEEEEEECChHHHHHHHHHHHHcCCceeEEecccc---ccccccccchhhhccc
Confidence            7999999999863 566665554 689999999999877666542   343 233322211   122 357999986543


Q ss_pred             CC---CChHHHHhccccCCeEEEEcc
Q 018382          254 AN---HPLEPYLSLLKLDGKLILTGV  276 (357)
Q Consensus       254 ~~---~~~~~~~~~l~~~G~~v~~g~  276 (357)
                      ..   ..+....+.|+|+|+++..|.
T Consensus       194 ~~~l~~l~~~~~~~LkpGG~lilSgi  219 (254)
T d2nxca1         194 AELHAALAPRYREALVPGGRALLTGI  219 (254)
T ss_dssp             HHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             cccHHHHHHHHHHhcCCCcEEEEEec
Confidence            32   134567788999999987544

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=96.52  E-value=0.0052  Score=47.29  Aligned_cols=87  Identities=18%  Similarity=0.150  Sum_probs=60.7

Q ss_pred             eEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCC-cEEEcCCChhHHHHhhCCccEEEEcCCCCC---Ch
Q 018382          183 RGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGA-DQYLVSSDATRMQEAADSLDYIIDTVPANH---PL  258 (357)
Q Consensus       183 ~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~-~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~---~~  258 (357)
                      +|.|+|+|.+|...+..++..|.+|++.++++++.+.+++ .|. +...+..      +.....|+||-++....   .+
T Consensus         2 kI~iIG~G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~-~~~~~~~~~~~------~~~~~~DiIilavp~~~~~~vl   74 (165)
T d2f1ka2           2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVE-RQLVDEAGQDL------SLLQTAKIIFLCTPIQLILPTL   74 (165)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-TTSCSEEESCG------GGGTTCSEEEECSCHHHHHHHH
T ss_pred             EEEEEeecHHHHHHHHHHHHCCCEEEEEECCchHHHHHHH-hhccceeeeec------ccccccccccccCcHhhhhhhh
Confidence            5789999999999998889999999999999888888877 773 4433211      23357899998876541   23


Q ss_pred             HHHHhccccCCeEEEEcc
Q 018382          259 EPYLSLLKLDGKLILTGV  276 (357)
Q Consensus       259 ~~~~~~l~~~G~~v~~g~  276 (357)
                      +.....+.++-.++.++.
T Consensus        75 ~~l~~~l~~~~iv~~~~s   92 (165)
T d2f1ka2          75 EKLIPHLSPTAIVTDVAS   92 (165)
T ss_dssp             HHHGGGSCTTCEEEECCS
T ss_pred             hhhhhhcccccceeeccc
Confidence            334444555555555543

>d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical Protein YjhP
domain: Hypothetical Protein YjhP
species: Escherichia coli [TaxId: 562]

Probab=96.52  E-value=0.0023  Score=52.89  Aligned_cols=103  Identities=22%  Similarity=0.160  Sum_probs=66.5

Q ss_pred             hhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHH---hcCCc---EEEcCCChhHHHHhhC
Q 018382          170 SPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAME---HLGAD---QYLVSSDATRMQEAAD  243 (357)
Q Consensus       170 ~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~---~~g~~---~vv~~~~~~~~~~~~~  243 (357)
                      ..|.....++||++||=+|+|. |..+..+++..|++|+.++.+++..+.+++   ..|..   ..+..+-.+.  ...+
T Consensus        23 ~~l~~~~~l~pg~~VLDiGCG~-G~~~~~la~~~~~~v~GvD~s~~~~~~ar~~~~~~gl~~~v~~~~~d~~~~--~~~~   99 (245)
T d1nkva_          23 ATLGRVLRMKPGTRILDLGSGS-GEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGY--VANE   99 (245)
T ss_dssp             HHHHHHTCCCTTCEEEEETCTT-CHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTC--CCSS
T ss_pred             HHHHHHcCCCCCCEEEEEcCCC-CHHHHHHHHhcCCEEEEEecccchhhHHHHHHHHhhccccchhhhhHHhhc--cccC
Confidence            3455556669999999999753 455677888889999999999887655544   24532   2222111111  1234


Q ss_pred             CccEEEEcC-----CC-CCChHHHHhccccCCeEEEEc
Q 018382          244 SLDYIIDTV-----PA-NHPLEPYLSLLKLDGKLILTG  275 (357)
Q Consensus       244 ~~d~v~d~~-----g~-~~~~~~~~~~l~~~G~~v~~g  275 (357)
                      .||+|+-.-     .. ...+..+.+.|+|+|+++...
T Consensus       100 ~fD~v~~~~~~~~~~d~~~~l~~~~r~LkPGG~l~i~~  137 (245)
T d1nkva_         100 KCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGE  137 (245)
T ss_dssp             CEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEE
T ss_pred             ceeEEEEEehhhccCCHHHHHHHHHHHcCcCcEEEEEe
Confidence            799887432     11 225667888999999988653

>d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=96.46  E-value=0.0043  Score=50.55  Aligned_cols=102  Identities=16%  Similarity=0.185  Sum_probs=68.1

Q ss_pred             hhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC--eEEEEeCCcHHHHHHHHhcC---CcEEE--cCCChhHHHHhhC
Q 018382          171 PLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH--HVTVISSSDKKRVEAMEHLG---ADQYL--VSSDATRMQEAAD  243 (357)
Q Consensus       171 ~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~--~V~~~~~~~~~~~~~~~~~g---~~~vv--~~~~~~~~~~~~~  243 (357)
                      .+..... +||++||=+|+|. |..+..+++..|.  +|++++.++...+.+++...   ....+  +...++.......
T Consensus        65 ~l~~l~i-~pG~~VLDlGaGs-G~~t~~la~~VG~~G~V~aVD~s~~~l~~a~~~a~~~~~~~~i~~d~~~~~~~~~~~~  142 (227)
T d1g8aa_          65 GLKNFPI-KPGKSVLYLGIAS-GTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRALVP  142 (227)
T ss_dssp             TCCCCCC-CTTCEEEEETTTS-TTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCC
T ss_pred             ccccccc-CCCCEEEEeccCC-CHHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHHhcCCceEEEEECCCccccccccc
Confidence            3555555 9999999999853 6778888888764  89999999988777766332   11112  2233333333334


Q ss_pred             CccEEEEcCCCCC----ChHHHHhccccCCeEEEE
Q 018382          244 SLDYIIDTVPANH----PLEPYLSLLKLDGKLILT  274 (357)
Q Consensus       244 ~~d~v~d~~g~~~----~~~~~~~~l~~~G~~v~~  274 (357)
                      .+|++|.......    .+..+.+.|+++|+++..
T Consensus       143 ~vD~i~~d~~~~~~~~~~l~~~~~~LkpgG~lvi~  177 (227)
T d1g8aa_         143 KVDVIFEDVAQPTQAKILIDNAEVYLKRGGYGMIA  177 (227)
T ss_dssp             CEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             ceEEEEEEccccchHHHHHHHHHHhcccCCeEEEE
Confidence            7898886554331    356677899999998764

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=96.42  E-value=0.0064  Score=50.92  Aligned_cols=76  Identities=17%  Similarity=0.215  Sum_probs=51.5

Q ss_pred             CCCeEEEEec-C--hHHHHHHHHHHHcCCeEEEEeCCcH---HHHHHHHhcCCcE--EEcCCChhHHHH----h---hCC
Q 018382          180 SGLRGGILGL-G--GVGHMGVLIAKAMGHHVTVISSSDK---KRVEAMEHLGADQ--YLVSSDATRMQE----A---ADS  244 (357)
Q Consensus       180 ~~~~VlI~G~-g--~~G~~ai~la~~~g~~V~~~~~~~~---~~~~~~~~~g~~~--vv~~~~~~~~~~----~---~~~  244 (357)
                      +|+++||+|+ |  ++|.+.++.+...|++|+++.++++   +.+.+.+..+...  ..|..+....++    .   .+.
T Consensus         4 ~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~   83 (274)
T d2pd4a1           4 KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLGS   83 (274)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred             CCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHcCC
Confidence            5899999985 5  7999999999999999999998864   3333444333222  234444332222    2   247


Q ss_pred             ccEEEEcCCCC
Q 018382          245 LDYIIDTVPAN  255 (357)
Q Consensus       245 ~d~v~d~~g~~  255 (357)
                      +|+++.+.|..
T Consensus        84 id~lV~nag~~   94 (274)
T d2pd4a1          84 LDFIVHSVAFA   94 (274)
T ss_dssp             EEEEEECCCCC
T ss_pred             CCeEEeecccc
Confidence            99999988763

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=96.40  E-value=0.0093  Score=45.17  Aligned_cols=82  Identities=21%  Similarity=0.212  Sum_probs=58.4

Q ss_pred             eEEEEecChHHHHHHHH-HHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCCChHHH
Q 018382          183 RGGILGLGGVGHMGVLI-AKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPY  261 (357)
Q Consensus       183 ~VlI~G~g~~G~~ai~l-a~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~  261 (357)
                      ++.++|+|.+|.++++- ++.-+.+|++..+++++.+.+.+++|.... +..+     . ....|+||-++-.. .+...
T Consensus         2 kI~fIG~G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~~~~~~-~~~~-----~-v~~~Div~lavkP~-~~~~v   73 (152)
T d1yqga2           2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVETS-ATLP-----E-LHSDDVLILAVKPQ-DMEAA   73 (152)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCEEE-SSCC-----C-CCTTSEEEECSCHH-HHHHH
T ss_pred             EEEEEcCcHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhcccccc-cccc-----c-ccccceEEEecCHH-HHHHh
Confidence            57888999999988874 454347999999999998888877886432 2211     1 23579999887644 56677


Q ss_pred             HhccccCCeEE
Q 018382          262 LSLLKLDGKLI  272 (357)
Q Consensus       262 ~~~l~~~G~~v  272 (357)
                      ++-+++.++++
T Consensus        74 ~~~l~~~~~~v   84 (152)
T d1yqga2          74 CKNIRTNGALV   84 (152)
T ss_dssp             HTTCCCTTCEE
T ss_pred             HHHHhhcccEE
Confidence            77777766654

>d1kpga_ c.66.1.18 (A:) CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA1
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.38  E-value=0.0025  Score=53.93  Aligned_cols=97  Identities=14%  Similarity=0.119  Sum_probs=65.0

Q ss_pred             hccCCCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCC-cEE-EcCCChhHHHHhhCCccE
Q 018382          173 SHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGA-DQY-LVSSDATRMQEAADSLDY  247 (357)
Q Consensus       173 ~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~-~~v-v~~~~~~~~~~~~~~~d~  247 (357)
                      .++ .+++|++||=+|+|- |..++.+|+..|++|++++.+++..+.+++.   .|. +.+ +...+.   ..+.+.+|.
T Consensus        56 ~~l-~l~~G~~VLDiGCG~-G~~a~~~a~~~g~~v~git~s~~Q~~~a~~~~~~~g~~~~v~~~~~d~---~~~~~~fD~  130 (285)
T d1kpga_          56 GKL-GLQPGMTLLDVGCGW-GATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGW---EQFDEPVDR  130 (285)
T ss_dssp             TTT-TCCTTCEEEEETCTT-SHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCG---GGCCCCCSE
T ss_pred             HHc-CCCCCCEEEEecCcc-hHHHHHHHhcCCcceEEEeccHHHHHHHHHHHHhhhhhhhhHHHHhhh---hcccccccc
Confidence            344 459999999999863 5667788998999999999999877766552   331 111 211121   233457887


Q ss_pred             EEE-----cCCCC---CChHHHHhccccCCeEEEE
Q 018382          248 IID-----TVPAN---HPLEPYLSLLKLDGKLILT  274 (357)
Q Consensus       248 v~d-----~~g~~---~~~~~~~~~l~~~G~~v~~  274 (357)
                      |+.     .++..   ..+..+.+.|+|+|+++.-
T Consensus       131 i~si~~~eh~~~~~~~~~~~~~~r~LkpgG~~~l~  165 (285)
T d1kpga_         131 IVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLH  165 (285)
T ss_dssp             EEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEE
T ss_pred             eeeehhhhhcCchhHHHHHHHHHhhcCCCCcEEEE
Confidence            764     34433   2456678899999998863

>d1i9ga_ c.66.1.13 (A:) Probable methyltransferase Rv2118c {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Probable methyltransferase Rv2118c
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.32  E-value=0.0048  Score=51.41  Aligned_cols=103  Identities=20%  Similarity=0.202  Sum_probs=67.9

Q ss_pred             hhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC--eEEEEeCCcHHHHHHHHhcC------C-cEEEcCCChhHHHHhh
Q 018382          172 LSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH--HVTVISSSDKKRVEAMEHLG------A-DQYLVSSDATRMQEAA  242 (357)
Q Consensus       172 l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~--~V~~~~~~~~~~~~~~~~~g------~-~~vv~~~~~~~~~~~~  242 (357)
                      +..+.. +||++||=.|+|. |.+++.+|+..|.  +|+.++.+++..+.+++++-      . +..+...+.....-..
T Consensus        89 i~~l~i-~PG~~VLE~G~Gs-G~lt~~La~~vgp~G~V~~~d~~~~~~~~Ar~n~~~~~~~~~~nv~~~~~d~~~~~~~~  166 (264)
T d1i9ga_          89 VHEGDI-FPGARVLEAGAGS-GALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSELPD  166 (264)
T ss_dssp             HHHTTC-CTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCCCCT
T ss_pred             HHHhCC-CCCCEEEecCcCC-cHHHHHHHHhhCCCcEEEEecCCHHHHHHHHHhhhhhccCCCceEEEEecccccccccC
Confidence            333444 9999999998753 7778889988874  89999999888777765321      1 2222222211111112


Q ss_pred             CCccEEEEcCCC-CCChHHHHhccccCCeEEEEcc
Q 018382          243 DSLDYIIDTVPA-NHPLEPYLSLLKLDGKLILTGV  276 (357)
Q Consensus       243 ~~~d~v~d~~g~-~~~~~~~~~~l~~~G~~v~~g~  276 (357)
                      +.+|.||--... ...++.+.+.|+|+|+++.+..
T Consensus       167 ~~fDaV~ldlp~P~~~l~~~~~~LkpGG~lv~~~P  201 (264)
T d1i9ga_         167 GSVDRAVLDMLAPWEVLDAVSRLLVAGGVLMVYVA  201 (264)
T ss_dssp             TCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEES
T ss_pred             CCcceEEEecCCHHHHHHHHHhccCCCCEEEEEeC
Confidence            479988654554 3367789999999999987743

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.31  E-value=0.00071  Score=53.22  Aligned_cols=73  Identities=15%  Similarity=0.170  Sum_probs=49.6

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCC----cE--EEcCCChhHHHHhhCCccEEEEcC
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGA----DQ--YLVSSDATRMQEAADSLDYIIDTV  252 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~----~~--vv~~~~~~~~~~~~~~~d~v~d~~  252 (357)
                      -++++|||+|+|+++.+++..+...| +|+++.|+.++.+.+.+.+..    ..  .++..   .+......+|++++|+
T Consensus        16 ~~~k~vlIlGaGG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~~dliIn~t   91 (177)
T d1nvta1          16 VKDKNIVIYGAGGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFS---GLDVDLDGVDIIINAT   91 (177)
T ss_dssp             CCSCEEEEECCSHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEE---CTTCCCTTCCEEEECS
T ss_pred             cCCCEEEEECCcHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHHHHhhchhhhhhhhhh---hhhhccchhhhhccCC
Confidence            57899999999999998887776555 999999998988776654431    10  00000   0111223689999998


Q ss_pred             CCC
Q 018382          253 PAN  255 (357)
Q Consensus       253 g~~  255 (357)
                      ...
T Consensus        92 p~g   94 (177)
T d1nvta1          92 PIG   94 (177)
T ss_dssp             CTT
T ss_pred             ccc
Confidence            654

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.31  E-value=0.0044  Score=50.54  Aligned_cols=96  Identities=20%  Similarity=0.054  Sum_probs=63.2

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEE----------------------cCCChh
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYL----------------------VSSDAT  236 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv----------------------~~~~~~  236 (357)
                      .++.+||.+|+|. |..+..+|+ .|++|++++-|+...+.++++.+.....                      ..+-.+
T Consensus        44 ~~~~rvLd~GCG~-G~~a~~LA~-~G~~V~gvD~S~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~  121 (229)
T d2bzga1          44 KSGLRVFFPLCGK-AVEMKWFAD-RGHSVVGVEISELGIQEFFTEQNLSYSEEPITEIPGTKVFKSSSGNISLYCCSIFD  121 (229)
T ss_dssp             CCSCEEEETTCTT-CTHHHHHHH-TTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCGGG
T ss_pred             CCCCEEEEeCCCC-cHHHHHHHh-CCCcEEEEeCCHHHHHHHHHHhhccccccchhcccccceeeecCCcEEEEEcchhh
Confidence            7889999999864 677777776 5999999999999888887755532110                      000001


Q ss_pred             HHHHhhCCccEEEEcCCCC--------CChHHHHhccccCCeEEEEcc
Q 018382          237 RMQEAADSLDYIIDTVPAN--------HPLEPYLSLLKLDGKLILTGV  276 (357)
Q Consensus       237 ~~~~~~~~~d~v~d~~g~~--------~~~~~~~~~l~~~G~~v~~g~  276 (357)
                      ......+.+|+|+++..-.        ..+....++|+|+|+++....
T Consensus       122 l~~~~~~~fd~i~~~~~l~~~~~~~r~~~~~~~~~~LkpgG~~~l~~~  169 (229)
T d2bzga1         122 LPRTNIGKFDMIWDRGALVAINPGDRKCYADTMFSLLGKKFQYLLCVL  169 (229)
T ss_dssp             GGGSCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred             ccccccCceeEEEEEEEEEeccchhhHHHHHHHHhhcCCcceEEEEEc
Confidence            1111123689999865321        133567889999999776644

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=96.29  E-value=0.0023  Score=45.87  Aligned_cols=67  Identities=18%  Similarity=0.291  Sum_probs=48.8

Q ss_pred             CCC-CeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEE-EcCCChhHHHHhhC--CccEE
Q 018382          179 QSG-LRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQY-LVSSDATRMQEAAD--SLDYI  248 (357)
Q Consensus       179 ~~~-~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~v-v~~~~~~~~~~~~~--~~d~v  248 (357)
                      .++ .+|.|+|+|.+|.++++-|+.+|.++++.+++++.-  +.. +...++ .++++.+.+.+...  .+|+|
T Consensus         8 ~~~~~kigIlGgGQL~rMla~aA~~lG~~v~v~d~~~~~P--A~~-va~~~i~~~~~d~~~l~~~~~~~~~Dvi   78 (111)
T d1kjqa2           8 RPAATRVMLLGSGELGKEVAIECQRLGVEVIAVDRYADAP--AMH-VAHRSHVINMLDGDALRRVVELEKPHYI   78 (111)
T ss_dssp             STTCCEEEEESCSHHHHHHHHHHHTTTCEEEEEESSTTCG--GGG-GSSEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred             CCCCCEEEEEeCCHHHHHHHHHHHHCCCEEEEEcCCCCCc--hhh-cCCeEEECCCCCHHHHHHHHHhhCCceE
Confidence            444 569999999999999999999999999999875532  212 343343 45667776666543  68888

>d2fk8a1 c.66.1.18 (A:22-301) Methoxy mycolic acid synthase 4, Mma4 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Methoxy mycolic acid synthase 4, Mma4
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.21  E-value=0.018  Score=48.27  Aligned_cols=96  Identities=11%  Similarity=0.153  Sum_probs=63.7

Q ss_pred             cCCCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCCc-EE-EcCCChhHHHHhhCCccEEE
Q 018382          175 FGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGAD-QY-LVSSDATRMQEAADSLDYII  249 (357)
Q Consensus       175 ~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~~-~v-v~~~~~~~~~~~~~~~d~v~  249 (357)
                      ...+++|++||=+|+|- |..+..+++..|++|+.++.+++..+.+++.   .|.. .+ +...+.   ....+.+|.|+
T Consensus        47 ~l~l~~g~~VLDiGCG~-G~~a~~~a~~~g~~v~gi~ls~~q~~~a~~~~~~~~l~~~~~~~~~d~---~~~~~~fD~i~  122 (280)
T d2fk8a1          47 KLDLKPGMTLLDIGCGW-GTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGW---EDFAEPVDRIV  122 (280)
T ss_dssp             TSCCCTTCEEEEESCTT-SHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCG---GGCCCCCSEEE
T ss_pred             HcCCCCCCEEEEecCCc-hHHHHHHHHhCceeEEEecchHHHHHHHHHHHHhhccccchhhhhhhh---hhhccchhhhh
Confidence            33459999999999863 3345678888899999999999987766553   3421 11 111121   23445788886


Q ss_pred             E-----cCCCC---CChHHHHhccccCCeEEEE
Q 018382          250 D-----TVPAN---HPLEPYLSLLKLDGKLILT  274 (357)
Q Consensus       250 d-----~~g~~---~~~~~~~~~l~~~G~~v~~  274 (357)
                      .     .++..   ..++...+.|+|+|+++.-
T Consensus       123 si~~~eh~~~~~~~~~f~~i~~~LkpgG~~~i~  155 (280)
T d2fk8a1         123 SIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQ  155 (280)
T ss_dssp             EESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEE
T ss_pred             HhhHHHHhhhhhHHHHHHHHHhccCCCceEEEE
Confidence            4     33332   1356678899999999864

>d1kpia_ c.66.1.18 (A:) CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA2
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.21  E-value=0.0065  Score=51.45  Aligned_cols=96  Identities=14%  Similarity=0.138  Sum_probs=63.1

Q ss_pred             cCCCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHH---hcCCcE--EEcCCChhHHHHhhCCccEEE
Q 018382          175 FGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAME---HLGADQ--YLVSSDATRMQEAADSLDYII  249 (357)
Q Consensus       175 ~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~---~~g~~~--vv~~~~~~~~~~~~~~~d~v~  249 (357)
                      ...+++|++||=+|+|- |-.++.+|+..|++|+.++.+++..+.+++   ..|...  .+...+.   ....+.||.|+
T Consensus        56 ~l~l~~G~~VLDiGCG~-G~~~~~~a~~~g~~v~git~s~~q~~~a~~~~~~~~l~~~v~~~~~d~---~~~~~~fD~i~  131 (291)
T d1kpia_          56 KLNLEPGMTLLDIGCGW-GSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGW---EEFDEPVDRIV  131 (291)
T ss_dssp             TTCCCTTCEEEEETCTT-SHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHSCCSSCEEEEECCG---GGCCCCCSEEE
T ss_pred             hcCCCCCCEEEEecCcc-hHHHHHHHHhcCcceeeccchHHHHHHHHHHHHhhccchhhhhhhhcc---cccccccceEe
Confidence            33459999999999863 345678888889999999999886554433   245321  1222221   12345799886


Q ss_pred             E-----cCCCC----------CChHHHHhccccCCeEEEE
Q 018382          250 D-----TVPAN----------HPLEPYLSLLKLDGKLILT  274 (357)
Q Consensus       250 d-----~~g~~----------~~~~~~~~~l~~~G~~v~~  274 (357)
                      .     .++..          ..+..+.+.|+|+|+++.-
T Consensus       132 sie~~eH~~~~~~~~~~~~~~~~f~~i~~~LkpgG~~~l~  171 (291)
T d1kpia_         132 SLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLH  171 (291)
T ss_dssp             EESCGGGTTCCSSCCSTTHHHHHHHHHHHTSCTTCEEEEE
T ss_pred             echhHHhcchhhhhhHHHHHHHHHHHHHHhCCCCCceEEE
Confidence            4     33321          1356788999999998864

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=96.18  E-value=0.0029  Score=52.38  Aligned_cols=73  Identities=11%  Similarity=0.029  Sum_probs=48.4

Q ss_pred             CeEEEEec-ChHHHHHHHHHH---HcCCeEEEEeCCcHHHHHHHH---hcCCc--EEEcCCChhH----HHHh---h--C
Q 018382          182 LRGGILGL-GGVGHMGVLIAK---AMGHHVTVISSSDKKRVEAME---HLGAD--QYLVSSDATR----MQEA---A--D  243 (357)
Q Consensus       182 ~~VlI~G~-g~~G~~ai~la~---~~g~~V~~~~~~~~~~~~~~~---~~g~~--~vv~~~~~~~----~~~~---~--~  243 (357)
                      ++|||+|+ +++|+++++.+.   ..|++|+++++++++.+.+++   ..+.-  ..+|..+++.    ++.+   .  +
T Consensus         3 KtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~   82 (248)
T d1snya_           3 NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKDQ   82 (248)
T ss_dssp             SEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGGG
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhcC
Confidence            57999987 999999886553   358899999999887655433   22322  2235555433    2222   1  3


Q ss_pred             CccEEEEcCCC
Q 018382          244 SLDYIIDTVPA  254 (357)
Q Consensus       244 ~~d~v~d~~g~  254 (357)
                      ++|++++++|.
T Consensus        83 ~iDiLvnNAg~   93 (248)
T d1snya_          83 GLNVLFNNAGI   93 (248)
T ss_dssp             CCSEEEECCCC
T ss_pred             CcceEEeeccc
Confidence            69999998875

>d2b25a1 c.66.1.13 (A:6-329) Hypothetical protein FLJ20628 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein FLJ20628
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.16  E-value=0.0074  Score=51.88  Aligned_cols=103  Identities=19%  Similarity=0.239  Sum_probs=65.4

Q ss_pred             hhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC--eEEEEeCCcHHHHHHHHhcC--------------CcEE-EcCCC
Q 018382          172 LSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH--HVTVISSSDKKRVEAMEHLG--------------ADQY-LVSSD  234 (357)
Q Consensus       172 l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~--~V~~~~~~~~~~~~~~~~~g--------------~~~v-v~~~~  234 (357)
                      +..++. +||++||=.|+|. |.+++.+|+..|.  +|+.+..+++..+.+++++-              .+.+ +...+
T Consensus        91 l~~l~i-~pG~rVLE~GtGs-G~lt~~LAr~vg~~G~V~t~E~~~~~~~~A~~n~~~~~~~~~~~~~~~~~~nv~~~~~d  168 (324)
T d2b25a1          91 LSMMDI-NPGDTVLEAGSGS-GGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKD  168 (324)
T ss_dssp             HHHHTC-CTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESC
T ss_pred             HHHhCC-CCCCEEEEecccc-cHHHHHHHHHhCCCcEEEEecCCHHHHHHHHHHHHHhhhhhhhhhhhccccceeEEecc
Confidence            344444 9999999998854 7888899998875  89999999988776655321              1111 11111


Q ss_pred             -hhHHHHhh-CCccEEEEcCCC-CCChHHHHhccccCCeEEEEcc
Q 018382          235 -ATRMQEAA-DSLDYIIDTVPA-NHPLEPYLSLLKLDGKLILTGV  276 (357)
Q Consensus       235 -~~~~~~~~-~~~d~v~d~~g~-~~~~~~~~~~l~~~G~~v~~g~  276 (357)
                       .+....+. ..+|.||--... ...+..+.+.|+|+|+++.+..
T Consensus       169 i~~~~~~~~~~~fD~V~LD~p~P~~~l~~~~~~LKpGG~lv~~~P  213 (324)
T d2b25a1         169 ISGATEDIKSLTFDAVALDMLNPHVTLPVFYPHLKHGGVCAVYVV  213 (324)
T ss_dssp             TTCCC-------EEEEEECSSSTTTTHHHHGGGEEEEEEEEEEES
T ss_pred             hhhcccccCCCCcceEeecCcCHHHHHHHHHHhccCCCEEEEEeC
Confidence             11111222 368888643333 3367889999999999987743

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=96.16  E-value=0.0099  Score=49.26  Aligned_cols=78  Identities=22%  Similarity=0.171  Sum_probs=52.7

Q ss_pred             CCCCCCeEEEEec-ChHHHHHHHHHHHcCC-eEEEEeCCcH---HH----HHHHHhcCCcE---EEcCCChhHHHHhh--
Q 018382          177 LKQSGLRGGILGL-GGVGHMGVLIAKAMGH-HVTVISSSDK---KR----VEAMEHLGADQ---YLVSSDATRMQEAA--  242 (357)
Q Consensus       177 ~~~~~~~VlI~G~-g~~G~~ai~la~~~g~-~V~~~~~~~~---~~----~~~~~~~g~~~---vv~~~~~~~~~~~~--  242 (357)
                      .++|+.++||+|+ +++|++.++.+...|+ +|+++.|++.   ..    +++.. .|...   ..|..+.+.++++.  
T Consensus         5 ~~~p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~-~g~~v~~~~~Dv~d~~~~~~~~~~   83 (259)
T d2fr1a1           5 EWKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEA-LGARTTVAACDVTDRESVRELLGG   83 (259)
T ss_dssp             CCCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHH-TTCEEEEEECCTTCHHHHHHHHHT
T ss_pred             ccCCcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHh-ccccccccccccchHHHHHHhhcc
Confidence            4589999999987 9999999988888899 5777776532   12    22233 56432   23666655544442  


Q ss_pred             --C--CccEEEEcCCCC
Q 018382          243 --D--SLDYIIDTVPAN  255 (357)
Q Consensus       243 --~--~~d~v~d~~g~~  255 (357)
                        .  ++|.++.+.|..
T Consensus        84 i~~~~~i~~vv~~ag~~  100 (259)
T d2fr1a1          84 IGDDVPLSAVFHAAATL  100 (259)
T ss_dssp             SCTTSCEEEEEECCCCC
T ss_pred             ccccccccccccccccc
Confidence              2  689999988764

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=96.13  E-value=0.012  Score=46.74  Aligned_cols=81  Identities=20%  Similarity=0.201  Sum_probs=58.5

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCCCh
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPL  258 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~~  258 (357)
                      -.|.+|+|.|.|.+|..+++++...|++|++.+.+.++...... +|.+.+ ...+     -+....|+.+=|+.....-
T Consensus        25 L~gk~v~IqG~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~~~-~g~~~~-~~~~-----~~~~~~DI~iPcA~~~~I~   97 (201)
T d1c1da1          25 LDGLTVLVQGLGAVGGSLASLAAEAGAQLLVADTDTERVAHAVA-LGHTAV-ALED-----VLSTPCDVFAPCAMGGVIT   97 (201)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-TTCEEC-CGGG-----GGGCCCSEEEECSCSCCBC
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEecchHHHHHHHHh-hccccc-Cccc-----cccccceeeeccccccccc
Confidence            36899999999999999999999999999999988888877777 776543 2111     1233678777766555333


Q ss_pred             HHHHhccc
Q 018382          259 EPYLSLLK  266 (357)
Q Consensus       259 ~~~~~~l~  266 (357)
                      ....+.++
T Consensus        98 ~~~a~~i~  105 (201)
T d1c1da1          98 TEVARTLD  105 (201)
T ss_dssp             HHHHHHCC
T ss_pred             HHHHhhhh
Confidence            44445453

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=96.12  E-value=0.0038  Score=54.16  Aligned_cols=79  Identities=13%  Similarity=-0.010  Sum_probs=55.6

Q ss_pred             CCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc----CC--cEEE--cCCChhHHHHhhCCccE
Q 018382          177 LKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL----GA--DQYL--VSSDATRMQEAADSLDY  247 (357)
Q Consensus       177 ~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~----g~--~~vv--~~~~~~~~~~~~~~~d~  247 (357)
                      .+.+|++|||+|+ |-+|..+++.+...|.+|++++++..+...+.+..    ..  ...+  |..+...+.++..++|+
T Consensus         7 ~~~~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   86 (342)
T d1y1pa1           7 VLPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAG   86 (342)
T ss_dssp             SSCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSE
T ss_pred             CCCCcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcccchh
Confidence            3478999999987 99999999888888999999999877765554311    11  1122  33444444455568999


Q ss_pred             EEEcCCCC
Q 018382          248 IIDTVPAN  255 (357)
Q Consensus       248 v~d~~g~~  255 (357)
                      |+.+++..
T Consensus        87 v~~~a~~~   94 (342)
T d1y1pa1          87 VAHIASVV   94 (342)
T ss_dssp             EEECCCCC
T ss_pred             hhhhcccc
Confidence            99877663

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=96.06  E-value=0.009  Score=49.70  Aligned_cols=76  Identities=13%  Similarity=0.156  Sum_probs=53.0

Q ss_pred             CCCCeEEEEec-C--hHHHHHHHHHHHcCCeEEEEeCCcHHH-HHHHHhcCCc---EEEcCCChhH----HHHhh-----
Q 018382          179 QSGLRGGILGL-G--GVGHMGVLIAKAMGHHVTVISSSDKKR-VEAMEHLGAD---QYLVSSDATR----MQEAA-----  242 (357)
Q Consensus       179 ~~~~~VlI~G~-g--~~G~~ai~la~~~g~~V~~~~~~~~~~-~~~~~~~g~~---~vv~~~~~~~----~~~~~-----  242 (357)
                      -+|+++||+|+ |  ++|.+.++.+...|++|+++.+++++. +.+.++++..   ...|..+++.    .+.+.     
T Consensus         4 l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~~~   83 (268)
T d2h7ma1           4 LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGA   83 (268)
T ss_dssp             TTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCT
T ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHcCCceeeEeeecccccccccccchhhhcccc
Confidence            46899999984 3  699999998989999999999888775 4455556632   2334544332    22221     


Q ss_pred             -CCccEEEEcCCC
Q 018382          243 -DSLDYIIDTVPA  254 (357)
Q Consensus       243 -~~~d~v~d~~g~  254 (357)
                       +.+|++++++|.
T Consensus        84 ~~~ld~~i~~ag~   96 (268)
T d2h7ma1          84 GNKLDGVVHSIGF   96 (268)
T ss_dssp             TCCEEEEEECCCC
T ss_pred             CCCcceeeecccc
Confidence             258999998874

>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Putative sarcosine dimethylglycine methyltransferase
species: Red algae (Galdieria sulphuraria) [TaxId: 130081]

Probab=96.04  E-value=0.0056  Score=51.57  Aligned_cols=103  Identities=17%  Similarity=0.215  Sum_probs=66.0

Q ss_pred             hhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCCc---EEEcCCChhHHHHhhCCc
Q 018382          172 LSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGAD---QYLVSSDATRMQEAADSL  245 (357)
Q Consensus       172 l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~~---~vv~~~~~~~~~~~~~~~  245 (357)
                      |.....+.++.+||=+|+| .|..+..+++..|++|++++.++...+.+++.   .|..   .++.. +...+.--.+.|
T Consensus        59 l~~~~~l~~~~~vLDiGcG-~G~~~~~la~~~~~~v~gvD~s~~~i~~a~~~~~~~gl~~~v~~~~~-d~~~l~~~~~sf  136 (282)
T d2o57a1          59 LAMTGVLQRQAKGLDLGAG-YGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYG-SFLEIPCEDNSY  136 (282)
T ss_dssp             HHHTTCCCTTCEEEEETCT-TSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEEC-CTTSCSSCTTCE
T ss_pred             HHHhcCCCCCCEEEEeCCC-CcHHHhhhhccCCcEEEEEeccchhhhhhhccccccccccccccccc-cccccccccccc
Confidence            4445566899999999986 35667788887899999999998766555542   3421   22221 211111112469


Q ss_pred             cEEEEcCCC------CCChHHHHhccccCCeEEEEcc
Q 018382          246 DYIIDTVPA------NHPLEPYLSLLKLDGKLILTGV  276 (357)
Q Consensus       246 d~v~d~~g~------~~~~~~~~~~l~~~G~~v~~g~  276 (357)
                      |+|+-.-.-      ...+..+.+.|+|+|+++....
T Consensus       137 D~V~~~~~l~h~~d~~~~l~~~~~~LkpgG~l~~~~~  173 (282)
T d2o57a1         137 DFIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITDP  173 (282)
T ss_dssp             EEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             chhhccchhhhccCHHHHHHHHHHhcCCCcEEEEEEe
Confidence            999753211      1245678889999999887643

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.02  E-value=0.011  Score=49.84  Aligned_cols=73  Identities=16%  Similarity=0.085  Sum_probs=44.9

Q ss_pred             eEEEEec-ChHHHHHHHHHHHcCCeEEEE---eCCcH---HHHHHHHhcC---Cc---EEEcCCChhHHHHhh-----CC
Q 018382          183 RGGILGL-GGVGHMGVLIAKAMGHHVTVI---SSSDK---KRVEAMEHLG---AD---QYLVSSDATRMQEAA-----DS  244 (357)
Q Consensus       183 ~VlI~G~-g~~G~~ai~la~~~g~~V~~~---~~~~~---~~~~~~~~~g---~~---~vv~~~~~~~~~~~~-----~~  244 (357)
                      .|||+|+ +++|.+.+..+...|++|+.+   .++.+   +.....+.+.   ..   ..+|..+.+.+.++.     +.
T Consensus         4 VvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~g~   83 (285)
T d1jtva_           4 VVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTEGR   83 (285)
T ss_dssp             EEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTTSC
T ss_pred             EEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccccc
Confidence            4567787 999999999988889875443   44433   3333333232   22   234666655444432     37


Q ss_pred             ccEEEEcCCCC
Q 018382          245 LDYIIDTVPAN  255 (357)
Q Consensus       245 ~d~v~d~~g~~  255 (357)
                      +|+++++.|..
T Consensus        84 idilvnnag~~   94 (285)
T d1jtva_          84 VDVLVCNAGLG   94 (285)
T ss_dssp             CSEEEECCCCC
T ss_pred             hhhhhhccccc
Confidence            99999988764

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=95.99  E-value=0.019  Score=44.99  Aligned_cols=42  Identities=12%  Similarity=0.146  Sum_probs=35.7

Q ss_pred             CCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHH
Q 018382          181 GLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAME  222 (357)
Q Consensus       181 ~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~  222 (357)
                      =++|.|+|+|.+|...+.++...|.+|++.+++++..+...+
T Consensus         4 I~~vaViGaG~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~~   45 (186)
T d1wdka3           4 VKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLA   45 (186)
T ss_dssp             CSSEEEECCHHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHH
T ss_pred             CCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCHHHHhhhhh
Confidence            467999999999999988888889999999999887655443

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=95.86  E-value=0.03  Score=42.93  Aligned_cols=90  Identities=18%  Similarity=0.174  Sum_probs=61.3

Q ss_pred             eEEEEecChHHHHHHHHHHHcCC--eEEEEeCCcHHHHHHHHhcCC-cEEEcCCChhHHHHhhCCccEEEEcCCCCC---
Q 018382          183 RGGILGLGGVGHMGVLIAKAMGH--HVTVISSSDKKRVEAMEHLGA-DQYLVSSDATRMQEAADSLDYIIDTVPANH---  256 (357)
Q Consensus       183 ~VlI~G~g~~G~~ai~la~~~g~--~V~~~~~~~~~~~~~~~~~g~-~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~---  256 (357)
                      +|+|+|+|.+|...+..++..|.  +|++.+++.+..+.+++ .+. +......+    .......|+|+-|+....   
T Consensus         3 ~I~IIG~G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~-~~~~~~~~~~~~----~~~~~~~dlIila~p~~~~~~   77 (171)
T d2g5ca2           3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVD-LGIIDEGTTSIA----KVEDFSPDFVMLSSPVRTFRE   77 (171)
T ss_dssp             EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHH-TTSCSEEESCGG----GGGGTCCSEEEECSCHHHHHH
T ss_pred             EEEEEccCHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHH-hhcchhhhhhhh----hhhccccccccccCCchhhhh
Confidence            68999999999999998988885  89999999998888888 674 44433221    112236788887776541   


Q ss_pred             ChHHHHhccccCCeEEEEccC
Q 018382          257 PLEPYLSLLKLDGKLILTGVI  277 (357)
Q Consensus       257 ~~~~~~~~l~~~G~~v~~g~~  277 (357)
                      .++.....+.++-.++.++..
T Consensus        78 vl~~l~~~~~~~~ii~d~~s~   98 (171)
T d2g5ca2          78 IAKKLSYILSEDATVTDQGSV   98 (171)
T ss_dssp             HHHHHHHHSCTTCEEEECCSC
T ss_pred             hhhhhhccccccccccccccc
Confidence            223344456666666666543

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.86  E-value=0.006  Score=50.75  Aligned_cols=75  Identities=15%  Similarity=0.030  Sum_probs=49.6

Q ss_pred             CCCeEEEEec-ChHHHHHHHH-HHH--cCCeEEEEeCCcHHHHHHHHhc----CCcE----EEcCCChhHHHHh----h-
Q 018382          180 SGLRGGILGL-GGVGHMGVLI-AKA--MGHHVTVISSSDKKRVEAMEHL----GADQ----YLVSSDATRMQEA----A-  242 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~l-a~~--~g~~V~~~~~~~~~~~~~~~~~----g~~~----vv~~~~~~~~~~~----~-  242 (357)
                      .|+.+||+|+ +++|.++++. |+.  .|++|+++.+++++.+.+.+++    +..+    ..|..+++.++++    . 
T Consensus         5 ~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~~~   84 (259)
T d1oaaa_           5 GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRE   84 (259)
T ss_dssp             BSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            4677788887 8999987765 443  5899999999998877665533    2112    2366665443332    1 


Q ss_pred             ------CCccEEEEcCCC
Q 018382          243 ------DSLDYIIDTVPA  254 (357)
Q Consensus       243 ------~~~d~v~d~~g~  254 (357)
                            ...|++++++|.
T Consensus        85 ~~~~~~~~~~~lvnnag~  102 (259)
T d1oaaa_          85 LPRPEGLQRLLLINNAAT  102 (259)
T ss_dssp             SCCCTTCCEEEEEECCCC
T ss_pred             hhhhccCceEEEEecccc
Confidence                  146788887663

>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein YcgJ
species: Bacillus subtilis [TaxId: 1423]

Probab=95.78  E-value=0.005  Score=50.28  Aligned_cols=100  Identities=17%  Similarity=0.223  Sum_probs=62.9

Q ss_pred             hccCCCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCCc--EEEcCCChhHHHHhhCCccE
Q 018382          173 SHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGAD--QYLVSSDATRMQEAADSLDY  247 (357)
Q Consensus       173 ~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~~--~vv~~~~~~~~~~~~~~~d~  247 (357)
                      .....++||++||=+|+|. |..+..+++. +.+|+.++.++.-.+.+++.   .|.+  .++..+..+ +.-..+.+|+
T Consensus         9 ~~~~~~~~~~rILDiGcGt-G~~~~~la~~-~~~v~gvD~S~~~l~~A~~~~~~~~~~~~~~~~~d~~~-~~~~~~~fD~   85 (234)
T d1xxla_           9 IKTAECRAEHRVLDIGAGA-GHTALAFSPY-VQECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAES-LPFPDDSFDI   85 (234)
T ss_dssp             HHHHTCCTTCEEEEESCTT-SHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTB-CCSCTTCEEE
T ss_pred             HHHhCCCCCCEEEEeCCcC-cHHHHHHHHh-CCeEEEEeCChhhhhhhhhhhccccccccccccccccc-ccccccccce
Confidence            3445559999999999853 6666777764 68999999998866655442   2322  122111111 1111246999


Q ss_pred             EEEcCCC------CCChHHHHhccccCCeEEEEc
Q 018382          248 IIDTVPA------NHPLEPYLSLLKLDGKLILTG  275 (357)
Q Consensus       248 v~d~~g~------~~~~~~~~~~l~~~G~~v~~g  275 (357)
                      |+-.-.-      ...++.+.+.|+|+|+++...
T Consensus        86 v~~~~~l~~~~d~~~~l~~~~r~LkpgG~~~~~~  119 (234)
T d1xxla_          86 ITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVD  119 (234)
T ss_dssp             EEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             eeeeceeecccCHHHHHHHHHHeeCCCcEEEEEE
Confidence            8854322      124677889999999987753

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=95.76  E-value=0.039  Score=42.82  Aligned_cols=36  Identities=25%  Similarity=0.310  Sum_probs=32.7

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCc
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSD  214 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~  214 (357)
                      ...++|+|+|+|+.|+.++..+...|.+|++....+
T Consensus        41 ~~~k~V~IIGaGPAGL~AA~~la~~G~~Vtl~E~~~   76 (179)
T d1ps9a3          41 VQKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHS   76 (179)
T ss_dssp             SSCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CCCcEEEEECccHHHHHHHHHHHhhccceEEEeccC
Confidence            556899999999999999999999999999998764

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=95.72  E-value=0.023  Score=43.33  Aligned_cols=96  Identities=18%  Similarity=0.183  Sum_probs=72.2

Q ss_pred             ccccchhhhhhhhhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhH
Q 018382          159 APLLCAGVTVFSPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATR  237 (357)
Q Consensus       159 a~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~  237 (357)
                      ..+||.....+..|++.+.--.|++|+|+|- ..+|.-+..++...|++|++..+.....                    
T Consensus        15 ~~~PcTp~aI~~lL~~y~i~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~~l--------------------   74 (166)
T d1b0aa1          15 RLRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNL--------------------   74 (166)
T ss_dssp             SSCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCH--------------------
T ss_pred             CCCCchHHHHHHHHHHcCcccccceEEEEeccccccHHHHHHHHHhhccccccccccchh--------------------
Confidence            4677777777777777776568999999996 7799999999999999998765432211                    


Q ss_pred             HHHhhCCccEEEEcCCCCCChHHHHhccccCCeEEEEccC
Q 018382          238 MQEAADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVI  277 (357)
Q Consensus       238 ~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~  277 (357)
                       +......|+++.++|.+..+.  .+.++++-.++++|..
T Consensus        75 -~~~~~~ADivI~a~G~p~~i~--~~~vk~g~vvIDvGi~  111 (166)
T d1b0aa1          75 -RHHVENADLLIVAVGKPGFIP--GDWIKEGAIVIDVGIN  111 (166)
T ss_dssp             -HHHHHHCSEEEECSCCTTCBC--TTTSCTTCEEEECCCE
T ss_pred             -HHHHhhhhHhhhhccCccccc--ccccCCCcEEEecCce
Confidence             223345899999999875543  4578888888888864

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=95.72  E-value=0.013  Score=46.33  Aligned_cols=88  Identities=26%  Similarity=0.292  Sum_probs=59.9

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCC---
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPAN---  255 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~---  255 (357)
                      -.|++|.|+|.|.+|...+++++.+|++|+..++...... ... .+....      +.++++....|+|.-++.-.   
T Consensus        47 L~gktvgIiG~G~IG~~va~~l~~fg~~v~~~d~~~~~~~-~~~-~~~~~~------~~l~~ll~~sD~i~~~~plt~~T  118 (193)
T d1mx3a1          47 IRGETLGIIGLGRVGQAVALRAKAFGFNVLFYDPYLSDGV-ERA-LGLQRV------STLQDLLFHSDCVTLHCGLNEHN  118 (193)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECTTSCTTH-HHH-HTCEEC------SSHHHHHHHCSEEEECCCCCTTC
T ss_pred             eeCceEEEeccccccccceeeeeccccceeeccCcccccc-hhh-hccccc------cchhhccccCCEEEEeecccccc
Confidence            3678999999999999999999999999999887644322 112 343221      12344445678887655432   


Q ss_pred             -CCh-HHHHhccccCCeEEEE
Q 018382          256 -HPL-EPYLSLLKLDGKLILT  274 (357)
Q Consensus       256 -~~~-~~~~~~l~~~G~~v~~  274 (357)
                       ..+ ...++.|+++..++.+
T Consensus       119 ~~li~~~~l~~mk~~a~lIN~  139 (193)
T d1mx3a1         119 HHLINDFTVKQMRQGAFLVNT  139 (193)
T ss_dssp             TTSBSHHHHTTSCTTEEEEEC
T ss_pred             hhhhhHHHHhccCCCCeEEec
Confidence             122 3567788888887766

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=95.71  E-value=0.0046  Score=50.24  Aligned_cols=98  Identities=14%  Similarity=0.147  Sum_probs=63.0

Q ss_pred             cCCCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCCc--EEEcCCChhHHHHhhCCccEEE
Q 018382          175 FGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGAD--QYLVSSDATRMQEAADSLDYII  249 (357)
Q Consensus       175 ~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~~--~vv~~~~~~~~~~~~~~~d~v~  249 (357)
                      ...++++++||=+|+| .|..+..+++. |.+|++++.+++-.+.+++.   .+.+  .++..+..+ +.-..+.||+|+
T Consensus        10 ~~~l~~~~rVLDiGcG-~G~~~~~l~~~-~~~v~gvD~s~~~i~~A~~~~~~~~~~~i~~~~~d~~~-l~~~~~~fD~v~   86 (231)
T d1vl5a_          10 IAALKGNEEVLDVATG-GGHVANAFAPF-VKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQ-MPFTDERFHIVT   86 (231)
T ss_dssp             HHTCCSCCEEEEETCT-TCHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-C-CCSCTTCEEEEE
T ss_pred             hcCCCCcCEEEEeccc-CcHHHHHHHHh-CCEEEEEECCHHHHhhhhhccccccccccccccccccc-cccccccccccc
Confidence            3445999999999986 46666667654 78999999998866655442   3432  222222111 111134799998


Q ss_pred             EcCC-----C-CCChHHHHhccccCCeEEEEc
Q 018382          250 DTVP-----A-NHPLEPYLSLLKLDGKLILTG  275 (357)
Q Consensus       250 d~~g-----~-~~~~~~~~~~l~~~G~~v~~g  275 (357)
                      -.-.     + ...+..+.+.|+|+|+++...
T Consensus        87 ~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~  118 (231)
T d1vl5a_          87 CRIAAHHFPNPASFVSEAYRVLKKGGQLLLVD  118 (231)
T ss_dssp             EESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             ccccccccCCHHHHHHHHHHhcCCCcEEEEEe
Confidence            5432     1 124677899999999988764

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=95.68  E-value=0.013  Score=48.49  Aligned_cols=76  Identities=17%  Similarity=0.184  Sum_probs=49.6

Q ss_pred             CCCCeEEEEec-C--hHHHHHHHHHHHcCCeEEEEeCCcHHHHHHH---HhcCCcEEE--cCCChhH----HHHhh---C
Q 018382          179 QSGLRGGILGL-G--GVGHMGVLIAKAMGHHVTVISSSDKKRVEAM---EHLGADQYL--VSSDATR----MQEAA---D  243 (357)
Q Consensus       179 ~~~~~VlI~G~-g--~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~---~~~g~~~vv--~~~~~~~----~~~~~---~  243 (357)
                      -+|+++||+|+ |  ++|.+.+..+...|++|+++.++++..+.+.   ...+....+  +..+...    ..+..   .
T Consensus         3 L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (258)
T d1qsga_           3 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWP   82 (258)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCS
T ss_pred             CCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhccc
Confidence            36899999986 5  6889999999999999999999876544332   223433322  2222222    22222   3


Q ss_pred             CccEEEEcCCC
Q 018382          244 SLDYIIDTVPA  254 (357)
Q Consensus       244 ~~d~v~d~~g~  254 (357)
                      ..|+.+++++.
T Consensus        83 ~~d~~v~~a~~   93 (258)
T d1qsga_          83 KFDGFVHSIGF   93 (258)
T ss_dssp             SEEEEEECCCC
T ss_pred             ccceEEEeecc
Confidence            68999988755

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.66  E-value=0.0069  Score=48.77  Aligned_cols=93  Identities=22%  Similarity=0.254  Sum_probs=59.4

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCC-cEEEcCCChhHHHHhhCCccEEEEcCCC
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGA-DQYLVSSDATRMQEAADSLDYIIDTVPA  254 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~-~~vv~~~~~~~~~~~~~~~d~v~d~~g~  254 (357)
                      +++++||-+|||. |..++.+++. |.+|++++.+++..+.+++.   .+. ...+.. +...+....+.+|+|+-...-
T Consensus        36 ~~~~~ILDiGcG~-G~~~~~la~~-~~~v~giD~S~~~i~~ak~~~~~~~~~~~~~~~-d~~~l~~~~~~fD~I~~~~~l  112 (226)
T d1ve3a1          36 KKRGKVLDLACGV-GGFSFLLEDY-GFEVVGVDISEDMIRKAREYAKSRESNVEFIVG-DARKLSFEDKTFDYVIFIDSI  112 (226)
T ss_dssp             CSCCEEEEETCTT-SHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCCEEEEC-CTTSCCSCTTCEEEEEEESCG
T ss_pred             CCCCEEEEECCCc-chhhhhHhhh-hcccccccccccchhhhhhhhcccccccccccc-ccccccccCcCceEEEEecch
Confidence            6788999999864 6677777764 88999999998877666553   232 122221 111111122479998754321


Q ss_pred             C--------CChHHHHhccccCCeEEEE
Q 018382          255 N--------HPLEPYLSLLKLDGKLILT  274 (357)
Q Consensus       255 ~--------~~~~~~~~~l~~~G~~v~~  274 (357)
                      .        ..++.+.+.|+|+|+++..
T Consensus       113 ~~~~~~d~~~~l~~i~~~LkpgG~lii~  140 (226)
T d1ve3a1         113 VHFEPLELNQVFKEVRRVLKPSGKFIMY  140 (226)
T ss_dssp             GGCCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             hhCChhHHHHHHHHHHHHcCcCcEEEEE
Confidence            1        1356688899999998754

>d2avna1 c.66.1.41 (A:1-246) Hypothetical methyltransferase TM1389 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical methyltransferase TM1389
species: Thermotoga maritima [TaxId: 2336]

Probab=95.66  E-value=0.0042  Score=50.85  Aligned_cols=92  Identities=18%  Similarity=0.252  Sum_probs=63.5

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCC----
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPA----  254 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~----  254 (357)
                      .++.+||=+|+| .|..+..+++ .|++|++++.+++..+.++++ +....+..+..+ +.-..+.+|+|+.....    
T Consensus        41 ~~~~~vLDiGcG-~G~~~~~l~~-~~~~v~giD~s~~~l~~a~~~-~~~~~~~~~~~~-l~~~~~~fD~ii~~~~~~~~~  116 (246)
T d2avna1          41 KNPCRVLDLGGG-TGKWSLFLQE-RGFEVVLVDPSKEMLEVAREK-GVKNVVEAKAED-LPFPSGAFEAVLALGDVLSYV  116 (246)
T ss_dssp             CSCCEEEEETCT-TCHHHHHHHT-TTCEEEEEESCHHHHHHHHHH-TCSCEEECCTTS-CCSCTTCEEEEEECSSHHHHC
T ss_pred             CCCCEEEEECCC-Cchhcccccc-cceEEEEeecccccccccccc-cccccccccccc-cccccccccceeeecchhhhh
Confidence            567889989987 5788888876 489999999999999888884 544444333222 11112479998854321    


Q ss_pred             ---CCChHHHHhccccCCeEEEE
Q 018382          255 ---NHPLEPYLSLLKLDGKLILT  274 (357)
Q Consensus       255 ---~~~~~~~~~~l~~~G~~v~~  274 (357)
                         ...++.+.++|+|+|.++..
T Consensus       117 ~d~~~~l~~i~r~Lk~gG~~ii~  139 (246)
T d2avna1         117 ENKDKAFSEIRRVLVPDGLLIAT  139 (246)
T ss_dssp             SCHHHHHHHHHHHEEEEEEEEEE
T ss_pred             hhHHHHHHHHHhhcCcCcEEEEE
Confidence               12356777899999988754

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.63  E-value=0.0045  Score=50.54  Aligned_cols=75  Identities=17%  Similarity=0.050  Sum_probs=50.1

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCC--eEEEEeCCcHHHHHHHHhcCCcE-EEcCCChhHHHHhhCCccEEEEcCCCC
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGH--HVTVISSSDKKRVEAMEHLGADQ-YLVSSDATRMQEAADSLDYIIDTVPAN  255 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~--~V~~~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~~~~d~v~d~~g~~  255 (357)
                      .+++|||+|+ |.+|...++.+...|.  +|++++|++.+...... -.... +.|..+.+.+.....++|++|.++|..
T Consensus        13 ~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~~-~~i~~~~~D~~~~~~~~~~~~~~d~vi~~~~~~   91 (232)
T d2bkaa1          13 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAY-KNVNQEVVDFEKLDDYASAFQGHDVGFCCLGTT   91 (232)
T ss_dssp             TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGG-GGCEEEECCGGGGGGGGGGGSSCSEEEECCCCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhccccc-ceeeeeeeccccccccccccccccccccccccc
Confidence            4578999998 9999999988877775  89999986543221110 11222 234444444445556899999999874

>d1zx0a1 c.66.1.16 (A:8-236) Guanidinoacetate methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Guanidinoacetate methyltransferase
domain: Guanidinoacetate methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.63  E-value=0.0057  Score=49.90  Aligned_cols=95  Identities=18%  Similarity=0.070  Sum_probs=61.4

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcC---CcEEEcCCChh-HHHHhh-CCccEE-EEcC
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLG---ADQYLVSSDAT-RMQEAA-DSLDYI-IDTV  252 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g---~~~vv~~~~~~-~~~~~~-~~~d~v-~d~~  252 (357)
                      .+|.+||-+|+|. |..+..+++..+.+|+++..++...+.+++...   ....+...+.. ...... +.+|.+ ||..
T Consensus        52 ~~g~~VLdIGcG~-G~~a~~~a~~~~~~v~~id~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~fD~~  130 (229)
T d1zx0a1          52 SKGGRVLEVGFGM-AIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTY  130 (229)
T ss_dssp             TTCEEEEEECCTT-SHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCC
T ss_pred             cCCCeEEEeeccc-hHHHHHHHHcCCCeEEEeCCCHHHHHHHHHHhhhcccccccccccccccccccccccccceeeccc
Confidence            6789999998853 667778888766799999999988888877443   11111112211 112222 368888 4655


Q ss_pred             CCCC----------ChHHHHhccccCCeEEEE
Q 018382          253 PANH----------PLEPYLSLLKLDGKLILT  274 (357)
Q Consensus       253 g~~~----------~~~~~~~~l~~~G~~v~~  274 (357)
                      ....          .++.+.+.|+|||+++..
T Consensus       131 ~~~~~~~~~~~~~~~~~~~~r~LkpGG~~~~~  162 (229)
T d1zx0a1         131 PLSEETWHTHQFNFIKNHAFRLLKPGGVLTYC  162 (229)
T ss_dssp             CCBGGGTTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred             ccccccccccCHHHHHHHHHHHcCCCcEEEEE
Confidence            4321          334577889999998764

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=95.63  E-value=0.019  Score=43.77  Aligned_cols=87  Identities=20%  Similarity=0.223  Sum_probs=61.3

Q ss_pred             eEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCCChHHH-
Q 018382          183 RGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPY-  261 (357)
Q Consensus       183 ~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~-  261 (357)
                      +|-|+|.|.+|..++.-+...|.+|++..+++++.+.+.+ .+... .+  .   ..+.....|++|-|+......+.. 
T Consensus         2 kIgiIGlG~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~-~~~~~-~~--~---~~e~~~~~d~ii~~v~~~~~v~~v~   74 (161)
T d1vpda2           2 KVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIA-AGAET-AS--T---AKAIAEQCDVIITMLPNSPHVKEVA   74 (161)
T ss_dssp             EEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-TTCEE-CS--S---HHHHHHHCSEEEECCSSHHHHHHHH
T ss_pred             EEEEEehhHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHH-hhhhh-cc--c---HHHHHhCCCeEEEEcCCHHHHHHHH
Confidence            4778899999999998888889999999999999888887 66532 21  1   223444688999888765344332 


Q ss_pred             ------HhccccCCeEEEEcc
Q 018382          262 ------LSLLKLDGKLILTGV  276 (357)
Q Consensus       262 ------~~~l~~~G~~v~~g~  276 (357)
                            ...++++-.++..+.
T Consensus        75 ~~~~~~~~~~~~g~iiid~sT   95 (161)
T d1vpda2          75 LGENGIIEGAKPGTVLIDMSS   95 (161)
T ss_dssp             HSTTCHHHHCCTTCEEEECSC
T ss_pred             hCCcchhhccCCCCEEEECCC
Confidence                  334556666666544

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.62  E-value=0.022  Score=44.57  Aligned_cols=88  Identities=20%  Similarity=0.271  Sum_probs=61.7

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCC---
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPAN---  255 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~---  255 (357)
                      -.++++.|+|.|.+|...+++++.+|++|++.++...+.... . .+... .      .++++....|+|.-++.-.   
T Consensus        42 l~~k~vgiiG~G~IG~~va~~~~~fg~~v~~~d~~~~~~~~~-~-~~~~~-~------~l~ell~~sDiv~~~~Plt~~T  112 (184)
T d1ygya1          42 IFGKTVGVVGLGRIGQLVAQRIAAFGAYVVAYDPYVSPARAA-Q-LGIEL-L------SLDDLLARADFISVHLPKTPET  112 (184)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECTTSCHHHHH-H-HTCEE-C------CHHHHHHHCSEEEECCCCSTTT
T ss_pred             ccceeeeeccccchhHHHHHHhhhccceEEeecCCCChhHHh-h-cCcee-c------cHHHHHhhCCEEEEcCCCCchh
Confidence            357899999999999999999999999999998765543322 2 34321 1      2344555689998765432   


Q ss_pred             -CCh-HHHHhccccCCeEEEEc
Q 018382          256 -HPL-EPYLSLLKLDGKLILTG  275 (357)
Q Consensus       256 -~~~-~~~~~~l~~~G~~v~~g  275 (357)
                       ..+ ...++.|+++..++.++
T Consensus       113 ~~lin~~~l~~mk~~a~lIN~s  134 (184)
T d1ygya1         113 AGLIDKEALAKTKPGVIIVNAA  134 (184)
T ss_dssp             TTCBCHHHHTTSCTTEEEEECS
T ss_pred             hhhhhHHHHhhhCCCceEEEec
Confidence             123 36778888888887763

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=95.61  E-value=0.019  Score=44.75  Aligned_cols=83  Identities=25%  Similarity=0.353  Sum_probs=60.9

Q ss_pred             CCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCC----
Q 018382          180 SGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPAN----  255 (357)
Q Consensus       180 ~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~----  255 (357)
                      .|++|.|+|.|.+|..++++++.+|++|++.++...+        +.....     +.++++....|+|+-++.-.    
T Consensus        41 ~gk~vgIiG~G~IG~~va~~l~~~g~~v~~~d~~~~~--------~~~~~~-----~~l~ell~~sDiv~~~~pl~~~t~  107 (181)
T d1qp8a1          41 QGEKVAVLGLGEIGTRVGKILAALGAQVRGFSRTPKE--------GPWRFT-----NSLEEALREARAAVCALPLNKHTR  107 (181)
T ss_dssp             TTCEEEEESCSTHHHHHHHHHHHTTCEEEEECSSCCC--------SSSCCB-----SCSHHHHTTCSEEEECCCCSTTTT
T ss_pred             cCceEEEeccccccccceeeeeccccccccccccccc--------cceeee-----echhhhhhccchhhcccccccccc
Confidence            5789999999999999999999999999999876432        111111     12456667899998766442    


Q ss_pred             CCh-HHHHhccccCCeEEEEc
Q 018382          256 HPL-EPYLSLLKLDGKLILTG  275 (357)
Q Consensus       256 ~~~-~~~~~~l~~~G~~v~~g  275 (357)
                      ..+ ...++.|+++..++.++
T Consensus       108 ~li~~~~l~~mk~~ailIN~~  128 (181)
T d1qp8a1         108 GLVKYQHLALMAEDAVFVNVG  128 (181)
T ss_dssp             TCBCHHHHTTSCTTCEEEECS
T ss_pred             cccccceeeeccccceEEecc
Confidence            122 46888899999888874

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=95.54  E-value=0.017  Score=45.68  Aligned_cols=85  Identities=19%  Similarity=0.262  Sum_probs=59.0

Q ss_pred             CCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCC----
Q 018382          180 SGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPAN----  255 (357)
Q Consensus       180 ~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~----  255 (357)
                      .|++|.|+|.|.+|..++++++.+|++|++.++.......  . .+..    .   ..+.++....|+++.++.-.    
T Consensus        42 ~gk~vgIiG~G~IG~~va~~l~~fg~~V~~~d~~~~~~~~--~-~~~~----~---~~l~~~l~~sDii~~~~plt~~T~  111 (197)
T d1j4aa1          42 RDQVVGVVGTGHIGQVFMQIMEGFGAKVITYDIFRNPELE--K-KGYY----V---DSLDDLYKQADVISLHVPDVPANV  111 (197)
T ss_dssp             GGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHHHH--H-TTCB----C---SCHHHHHHHCSEEEECSCCCGGGT
T ss_pred             cCCeEEEecccccchhHHHhHhhhcccccccCcccccccc--c-ceee----e---ccccccccccccccccCCcccccc
Confidence            4789999999999999999999999999998876443221  1 2211    1   12344445689988776532    


Q ss_pred             CCh-HHHHhccccCCeEEEE
Q 018382          256 HPL-EPYLSLLKLDGKLILT  274 (357)
Q Consensus       256 ~~~-~~~~~~l~~~G~~v~~  274 (357)
                      ..+ ...++.|+++..++.+
T Consensus       112 ~li~~~~l~~mk~~a~lIN~  131 (197)
T d1j4aa1         112 HMINDESIAKMKQDVVIVNV  131 (197)
T ss_dssp             TCBSHHHHHHSCTTEEEEEC
T ss_pred             ccccHHHHhhhCCccEEEec
Confidence            122 4567888888777766

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=95.50  E-value=0.041  Score=42.86  Aligned_cols=93  Identities=18%  Similarity=0.148  Sum_probs=58.6

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCC-c--EEEcCCChhHHHHhhCCccEEEEcC
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGA-D--QYLVSSDATRMQEAADSLDYIIDTV  252 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~-~--~vv~~~~~~~~~~~~~~~d~v~d~~  252 (357)
                      ++|++||=+|+|. |..++.+|+. +.+|++++.+++..+.++++   .|. +  .++.. +......-...+|.|+-..
T Consensus        32 ~~g~~VLDiGcGs-G~~s~~lA~~-~~~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~g-da~~~~~~~~~~D~v~~~~  108 (186)
T d1l3ia_          32 GKNDVAVDVGCGT-GGVTLELAGR-VRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEG-DAPEALCKIPDIDIAVVGG  108 (186)
T ss_dssp             CTTCEEEEESCTT-SHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEES-CHHHHHTTSCCEEEEEESC
T ss_pred             CCCCEEEEEECCe-Eccccccccc-ceEEEEecCCHHHHHHHHHHHHHcCCCcceEEEEC-chhhcccccCCcCEEEEeC
Confidence            8999999998742 3444556654 56999999998877666542   453 2  23322 2211122224799998654


Q ss_pred             CCC---CChHHHHhccccCCeEEEE
Q 018382          253 PAN---HPLEPYLSLLKLDGKLILT  274 (357)
Q Consensus       253 g~~---~~~~~~~~~l~~~G~~v~~  274 (357)
                      +..   ..++.+.+.|+|+|+++..
T Consensus       109 ~~~~~~~~~~~~~~~LkpgG~lvi~  133 (186)
T d1l3ia_         109 SGGELQEILRIIKDKLKPGGRIIVT  133 (186)
T ss_dssp             CTTCHHHHHHHHHHTEEEEEEEEEE
T ss_pred             ccccchHHHHHHHHHhCcCCEEEEE
Confidence            332   2355677889999998754

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.49  E-value=0.077  Score=40.75  Aligned_cols=96  Identities=21%  Similarity=0.270  Sum_probs=63.6

Q ss_pred             eEEEEecChHHHHHHHHHHHcC-CeEEEEeC--CcHHHHHHHHhcCCcEEEcCCC-hh-----------HHHHhhCCccE
Q 018382          183 RGGILGLGGVGHMGVLIAKAMG-HHVTVISS--SDKKRVEAMEHLGADQYLVSSD-AT-----------RMQEAADSLDY  247 (357)
Q Consensus       183 ~VlI~G~g~~G~~ai~la~~~g-~~V~~~~~--~~~~~~~~~~~~g~~~vv~~~~-~~-----------~~~~~~~~~d~  247 (357)
                      +|.|.|.|-+|...++.+.... .+++.+..  .+.....+.+ ++.+......+ ..           .+.++..++|+
T Consensus         4 rIaINGfGRIGR~v~Ral~~~~dieiVaINd~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vDv   82 (172)
T d2czca2           4 KVGVNGYGTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKE-LGIPVYAASEEFIPRFEKEGFEVAGTLNDLLEKVDI   82 (172)
T ss_dssp             EEEEECCSHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHH-TTCCEEESSGGGHHHHHHHTCCCSCBHHHHHTTCSE
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCceEEEEecCCChHHHHHhhh-cCceeecccccceeeecccCccccchhhhhhccCCE
Confidence            6889999999999888876554 47776643  2334445555 67554332211 11           12222347999


Q ss_pred             EEEcCCCCCChHHHHhccccCCeEEEEccCCC
Q 018382          248 IIDTVPANHPLEPYLSLLKLDGKLILTGVINT  279 (357)
Q Consensus       248 v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~  279 (357)
                      |+||+|.....+.+-..+..+-+.|..+.+..
T Consensus        83 ViEcTG~f~~~~~~~~hl~~G~k~Vi~s~~~~  114 (172)
T d2czca2          83 IVDATPGGIGAKNKPLYEKAGVKAIFQGGEKA  114 (172)
T ss_dssp             EEECCSTTHHHHHHHHHHHHTCEEEECTTSCG
T ss_pred             EEECCCCCCCHHHHHHHHHcCCCEEEECCCCc
Confidence            99999998556677778888888888877543

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.47  E-value=0.014  Score=44.01  Aligned_cols=34  Identities=24%  Similarity=0.265  Sum_probs=30.9

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeC
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISS  212 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~  212 (357)
                      -.|++|||+|+|.+|..-+..+...|++|+++++
T Consensus        11 l~gkrvLViGgG~va~~ka~~Ll~~GA~VtVvap   44 (150)
T d1kyqa1          11 LKDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSP   44 (150)
T ss_dssp             CTTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEE
T ss_pred             eCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeC
Confidence            3689999999999999999999999999999964

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=95.44  E-value=0.24  Score=36.73  Aligned_cols=73  Identities=18%  Similarity=0.202  Sum_probs=50.8

Q ss_pred             CeEEEEe-cChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhH----HHHhhC---CccEEEEcCC
Q 018382          182 LRGGILG-LGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATR----MQEAAD---SLDYIIDTVP  253 (357)
Q Consensus       182 ~~VlI~G-~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~----~~~~~~---~~d~v~d~~g  253 (357)
                      ++|.|+| .|.+|..++..++..|.+|.+.++.......... .+++.++.......    +.++..   .=.+++|+..
T Consensus        10 ~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~~~~~-~~~~~v~~~~~~~~~~~v~~~~~~~~~~~~iiiD~~S   88 (152)
T d2pv7a2          10 HKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVAESIL-ANADVVIVSVPINLTLETIERLKPYLTENMLLADLTS   88 (152)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHHHHH-TTCSEEEECSCGGGHHHHHHHHGGGCCTTSEEEECCS
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccccccchhh-hhccccccccchhhheeeeecccccccCCceEEEecc
Confidence            6899999 6999999999999999999999988776555444 46666654443222    222221   2347778776


Q ss_pred             CC
Q 018382          254 AN  255 (357)
Q Consensus       254 ~~  255 (357)
                      ..
T Consensus        89 vk   90 (152)
T d2pv7a2          89 VK   90 (152)
T ss_dssp             CC
T ss_pred             cC
Confidence            65

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=95.39  E-value=0.024  Score=44.50  Aligned_cols=88  Identities=15%  Similarity=0.142  Sum_probs=61.4

Q ss_pred             CCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCC----
Q 018382          180 SGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPAN----  255 (357)
Q Consensus       180 ~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~----  255 (357)
                      .+.++.|+|.|.+|...++.++.+|.+|+..++.......... .+....      ..+.++....|+|.-+..-.    
T Consensus        43 ~~~~vgiiG~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~-~~~~~~------~~l~~~l~~sD~v~~~~plt~~T~  115 (188)
T d2naca1          43 EAMHVGTVAAGRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKE-LNLTWH------ATREDMYPVCDVVTLNCPLHPETE  115 (188)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHH-HTCEEC------SSHHHHGGGCSEEEECSCCCTTTT
T ss_pred             cccceeeccccccchhhhhhhhccCceEEEEeecccccccccc-cccccc------CCHHHHHHhccchhhcccccccch
Confidence            5789999999999999999999999999999976544333333 443221      12344556788887765432    


Q ss_pred             CC-hHHHHhccccCCeEEEE
Q 018382          256 HP-LEPYLSLLKLDGKLILT  274 (357)
Q Consensus       256 ~~-~~~~~~~l~~~G~~v~~  274 (357)
                      .. -...++.|+++..+|.+
T Consensus       116 ~li~~~~l~~mk~ga~lIN~  135 (188)
T d2naca1         116 HMINDETLKLFKRGAYIVNT  135 (188)
T ss_dssp             TCBSHHHHTTSCTTEEEEEC
T ss_pred             hhhHHHHHHhCCCCCEEEec
Confidence            12 24677888888777766

>d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=95.36  E-value=0.038  Score=44.83  Aligned_cols=101  Identities=14%  Similarity=0.119  Sum_probs=62.6

Q ss_pred             hhccCCCCCCCeEEEEecChHHHHHHHHHHHcC-CeEEEEeCCcHHHHHHHHhcC---CcEEE--cCCChhHHHHhhCCc
Q 018382          172 LSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMG-HHVTVISSSDKKRVEAMEHLG---ADQYL--VSSDATRMQEAADSL  245 (357)
Q Consensus       172 l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g-~~V~~~~~~~~~~~~~~~~~g---~~~vv--~~~~~~~~~~~~~~~  245 (357)
                      +..... +||++||=+|+|. |..+..+++... .+|++++-++...+.+.+...   ....+  +...+.........+
T Consensus        67 l~~l~i-kpG~~VLDlGcGs-G~~~~~la~~~~~g~V~aVDiS~~~i~~a~~~a~~~~ni~~i~~d~~~~~~~~~~~~~v  144 (230)
T d1g8sa_          67 LKVMPI-KRDSKILYLGASA-GTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYANIVEKV  144 (230)
T ss_dssp             CCCCCC-CTTCEEEEESCCS-SHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTCCCE
T ss_pred             HHhCCC-CCCCEEEEeCEEc-CHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHhhhcccceEEEeeccCccccccccee
Confidence            444444 9999999999853 566667777543 499999999988777766322   11222  222222222222356


Q ss_pred             cEEEEcCCCCC----ChHHHHhccccCCeEEEE
Q 018382          246 DYIIDTVPANH----PLEPYLSLLKLDGKLILT  274 (357)
Q Consensus       246 d~v~d~~g~~~----~~~~~~~~l~~~G~~v~~  274 (357)
                      |+++.......    .+..+.+.|+|+|.++..
T Consensus       145 ~~i~~~~~~~~~~~~~l~~~~r~LKpgG~~~i~  177 (230)
T d1g8sa_         145 DVIYEDVAQPNQAEILIKNAKWFLKKGGYGMIA  177 (230)
T ss_dssp             EEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             EEeeccccchHHHHHHHHHHHHhcccCceEEEE
Confidence            66766554331    355677889999998765

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=95.33  E-value=0.019  Score=49.57  Aligned_cols=76  Identities=18%  Similarity=0.128  Sum_probs=53.9

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc----CCcEE-EcCCChhHHHHhhC--CccEEEEc
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL----GADQY-LVSSDATRMQEAAD--SLDYIIDT  251 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~----g~~~v-v~~~~~~~~~~~~~--~~d~v~d~  251 (357)
                      ++++|||+|+ |-+|..+++.+...|.+|+++++...+...+.+..    +...+ .|.++.+.+.++..  .+|+|+.+
T Consensus         7 ~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~~~~~~~v~~~   86 (356)
T d1rkxa_           7 QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFHM   86 (356)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhcccCCeEEEeeccChHhhhhhhhhchhhhhhhh
Confidence            5799999987 99999999999999999999998766433222212    22222 35556666555543  78999998


Q ss_pred             CCCC
Q 018382          252 VPAN  255 (357)
Q Consensus       252 ~g~~  255 (357)
                      ++..
T Consensus        87 aa~~   90 (356)
T d1rkxa_          87 AAQP   90 (356)
T ss_dssp             CSCC
T ss_pred             hccc
Confidence            8764

>d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermus aquaticus [TaxId: 271]

Probab=95.29  E-value=0.07  Score=40.77  Aligned_cols=95  Identities=16%  Similarity=0.211  Sum_probs=62.9

Q ss_pred             eEEEEecChHHHHHHHHHHHcCCeEEEEeCCc--HHHHHHHHhcCC-------c---------------EEEcCCChhHH
Q 018382          183 RGGILGLGGVGHMGVLIAKAMGHHVTVISSSD--KKRVEAMEHLGA-------D---------------QYLVSSDATRM  238 (357)
Q Consensus       183 ~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~--~~~~~~~~~~g~-------~---------------~vv~~~~~~~~  238 (357)
                      +|.|.|-|-+|..+.+.+...+.+|+++-...  +....+.+ +-.       +               .+...++++.+
T Consensus         2 kigINGfGRIGR~~~R~l~~~~i~iv~INd~~~~~~~ayLl~-yDS~hG~~~~~v~~~~~~l~i~g~~I~~~~~~~p~~i   80 (168)
T d2g82a1           2 KVGINGFGRIGRQVFRILHSRGVEVALINDLTDNKTLAHLLK-YDSIYHRFPGEVAYDDQYLYVDGKAIRATAVKDPKEI   80 (168)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHTCCEEEEECSSCHHHHHHHHH-CCTTTCSCSSCEEECSSEEEETTEEEEEECCSSGGGC
T ss_pred             EEEEECCcHHHHHHHHHHhcCCCEEEEECCCcchhhhhheee-cccccCccccccccccceeEecceeEEEEecCChHHC
Confidence            57889999999999999888888888775432  23334444 321       0               11222334434


Q ss_pred             HHhhCCccEEEEcCCCCCChHHHHhccccCCeEEEEccCC
Q 018382          239 QEAADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVIN  278 (357)
Q Consensus       239 ~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~  278 (357)
                      .+...++|+|+||+|.....+.+...+..+-+-|.+..+.
T Consensus        81 ~W~~~gvdiViEcTG~f~~~~~~~~hl~~gakkViiSAP~  120 (168)
T d2g82a1          81 PWAEAGVGVVIESTGVFTDADKAKAHLEGGAKKVIITAPA  120 (168)
T ss_dssp             CTGGGTEEEEEECSSSCCBHHHHTHHHHTTCSEEEESSCC
T ss_pred             cccccCCceeEeccccccchHHhhhhhccccceeeecccc
Confidence            4444589999999999866777888888776666665543

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=95.26  E-value=0.021  Score=45.69  Aligned_cols=96  Identities=16%  Similarity=0.120  Sum_probs=60.2

Q ss_pred             CCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHh---cCCcEEE--cCCChhHHHHhhCCccEEEEc
Q 018382          178 KQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEH---LGADQYL--VSSDATRMQEAADSLDYIIDT  251 (357)
Q Consensus       178 ~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~---~g~~~vv--~~~~~~~~~~~~~~~d~v~d~  251 (357)
                      ++||++||=+|+|. |..+..+++..+. +|++++-++...+.+++.   .+....+  +..++.........+|+++..
T Consensus        54 lkpg~~VLDlGcG~-G~~~~~la~~v~~g~V~gvDis~~~i~~a~~~a~~~~ni~~i~~d~~~~~~~~~~~~~vd~v~~~  132 (209)
T d1nt2a_          54 LRGDERVLYLGAAS-GTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYSGIVEKVDLIYQD  132 (209)
T ss_dssp             CCSSCEEEEETCTT-SHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTTTTCCCEEEEEEC
T ss_pred             CCCCCEEEEeCCcC-CHHHHHHHHhccCCeEEEEeCCHHHHHHHHHHhhccCCceEEEeeccCccccccccceEEEEEec
Confidence            49999999999753 4566667776653 899999998877665442   2322222  112222222222367888765


Q ss_pred             CCCCC----ChHHHHhccccCCeEEEE
Q 018382          252 VPANH----PLEPYLSLLKLDGKLILT  274 (357)
Q Consensus       252 ~g~~~----~~~~~~~~l~~~G~~v~~  274 (357)
                      .....    .+..+.+.|+++|+++..
T Consensus       133 ~~~~~~~~~~l~~~~~~LkpgG~l~i~  159 (209)
T d1nt2a_         133 IAQKNQIEILKANAEFFLKEKGEVVIM  159 (209)
T ss_dssp             CCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             ccChhhHHHHHHHHHHHhccCCeEEEE
Confidence            44331    355677899999998765

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=95.26  E-value=0.071  Score=41.19  Aligned_cols=95  Identities=15%  Similarity=0.187  Sum_probs=59.1

Q ss_pred             eEEEEecChHHHHHHHHHHHcC-CeEEEEeCC--cHHHHHHHHhcCCcEEEcCCChhH-----------HHHhhCCccEE
Q 018382          183 RGGILGLGGVGHMGVLIAKAMG-HHVTVISSS--DKKRVEAMEHLGADQYLVSSDATR-----------MQEAADSLDYI  248 (357)
Q Consensus       183 ~VlI~G~g~~G~~ai~la~~~g-~~V~~~~~~--~~~~~~~~~~~g~~~vv~~~~~~~-----------~~~~~~~~d~v  248 (357)
                      +|.|.|.|-+|...++.+.... .+++++...  ......+.+ ++............           +.+...++|+|
T Consensus         3 KVaINGfGRIGR~v~Ral~~~~dievVaInd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~v~g~~~~~~~~vDiV   81 (178)
T d1b7go1           3 NVAVNGYGTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHR-RGIRIYVPQQSIKKFEESGIPVAGTVEDLIKTSDIV   81 (178)
T ss_dssp             EEEEECCSHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHHH-TTCCEECCGGGHHHHHTTTCCCCCCHHHHHHHCSEE
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCCEEEEEECCCCcHHHHHhcc-cCcceeccCccceeccccceecCCchhhhhhcCCEE
Confidence            5889999999999999998664 588777532  233444444 55433322222111           12222369999


Q ss_pred             EEcCCCCCChHHHHhccccCCeEEEEccCC
Q 018382          249 IDTVPANHPLEPYLSLLKLDGKLILTGVIN  278 (357)
Q Consensus       249 ~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~  278 (357)
                      +||+|.....+.+...++.+-+++..+...
T Consensus        82 iecTG~f~~~e~a~~hl~~G~KvIi~~~~~  111 (178)
T d1b7go1          82 VDTTPNGVGAQYKPIYLQLQRNAIFQGGEK  111 (178)
T ss_dssp             EECCSTTHHHHHHHHHHHTTCEEEECTTSC
T ss_pred             EECCCCcCCHHHHHHHHHcCCEEEEECCCC
Confidence            999998745556666676665777665543

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=95.21  E-value=0.007  Score=40.00  Aligned_cols=35  Identities=20%  Similarity=0.227  Sum_probs=31.3

Q ss_pred             CeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHH
Q 018382          182 LRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKK  216 (357)
Q Consensus       182 ~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~  216 (357)
                      ++|.|+|+|.+|.++++-++.+|.++.+.+..++.
T Consensus         2 k~vgIlG~GQLgrMl~~Aa~~LG~~v~vldp~~~~   36 (78)
T d3etja2           2 KQVCVLGNGQLGRMLRQAGEPLGIAVWPVGLDAEP   36 (78)
T ss_dssp             EEEEEEBCSHHHHHHHHHHGGGTEEEEEECTTSCG
T ss_pred             CEEEEEcCCHHHHHHHHHHHHcCCEEEEEcCCCCC
Confidence            47899999999999999999999999999976543

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=95.21  E-value=0.033  Score=45.90  Aligned_cols=72  Identities=17%  Similarity=0.129  Sum_probs=46.7

Q ss_pred             eEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHH-HH----HHHhcCCcEEEc---CC-C---hhHHHH-------hh
Q 018382          183 RGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKR-VE----AMEHLGADQYLV---SS-D---ATRMQE-------AA  242 (357)
Q Consensus       183 ~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~-~~----~~~~~g~~~vv~---~~-~---~~~~~~-------~~  242 (357)
                      +.||+|+ +++|.+.+..+...|++|+++.++.++. +.    +.+..+.+....   .. +   .+.+++       ..
T Consensus         3 vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (266)
T d1mxha_           3 AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAF   82 (266)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHHh
Confidence            4678887 9999999999999999999999886543 22    223234333221   11 1   222222       12


Q ss_pred             CCccEEEEcCCC
Q 018382          243 DSLDYIIDTVPA  254 (357)
Q Consensus       243 ~~~d~v~d~~g~  254 (357)
                      +.+|++++++|.
T Consensus        83 g~iDilvnnAG~   94 (266)
T d1mxha_          83 GRCDVLVNNASA   94 (266)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCcc
Confidence            479999999885

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=95.21  E-value=0.041  Score=46.05  Aligned_cols=74  Identities=24%  Similarity=0.294  Sum_probs=52.0

Q ss_pred             CCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcH-----HHHHHH--HhcCCcEE-EcCCChhHHHHhhCCccEEEEc
Q 018382          181 GLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDK-----KRVEAM--EHLGADQY-LVSSDATRMQEAADSLDYIIDT  251 (357)
Q Consensus       181 ~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~-----~~~~~~--~~~g~~~v-v~~~~~~~~~~~~~~~d~v~d~  251 (357)
                      -++|||+|+ |.+|..++..+...|.+|++++|+..     +...+.  ...+++.+ .|..+.+.+.+...+.+.++.+
T Consensus         3 k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~~~~~~~~~   82 (312)
T d1qyda_           3 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVISA   82 (312)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEEC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhccCcchhhhh
Confidence            456999987 99999999988889999999988643     122221  21344433 3555666677777788899887


Q ss_pred             CCC
Q 018382          252 VPA  254 (357)
Q Consensus       252 ~g~  254 (357)
                      .+.
T Consensus        83 ~~~   85 (312)
T d1qyda_          83 LAG   85 (312)
T ss_dssp             CCC
T ss_pred             hhh
Confidence            755

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=95.20  E-value=0.0016  Score=50.25  Aligned_cols=88  Identities=17%  Similarity=0.207  Sum_probs=55.7

Q ss_pred             eEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCC-----cEEEcCCChhHHHHhhCCccEEEEcCCCCCC
Q 018382          183 RGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGA-----DQYLVSSDATRMQEAADSLDYIIDTVPANHP  257 (357)
Q Consensus       183 ~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~-----~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~  257 (357)
                      +|+|+|+|.+|.+.+..+...|.+|..+++++++...... .+.     ...+.....    +....+|++|-++-.. .
T Consensus         2 kI~IiGaG~iG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~~----~~~~~~D~iii~vka~-~   75 (167)
T d1ks9a2           2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVPQPYCSVNL-VETDGSIFNESLTANDP----DFLATSDLLLVTLKAW-Q   75 (167)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSEEEEEE-ECTTSCEEEEEEEESCH----HHHHTCSEEEECSCGG-G
T ss_pred             EEEEECcCHHHHHHHHHHHHCCCceEEEEcCHHHhhhhcc-ccCCccccccccccchh----hhhcccceEEEeeccc-c
Confidence            6899999999999888888889999999988764332211 121     111111111    2224799999988876 4


Q ss_pred             hHHHH----hccccCCeEEEEcc
Q 018382          258 LEPYL----SLLKLDGKLILTGV  276 (357)
Q Consensus       258 ~~~~~----~~l~~~G~~v~~g~  276 (357)
                      ...++    ..+.++..++.+.+
T Consensus        76 ~~~~~~~l~~~~~~~~~Iv~~qN   98 (167)
T d1ks9a2          76 VSDAVKSLASTLPVTTPILLIHN   98 (167)
T ss_dssp             HHHHHHHHHTTSCTTSCEEEECS
T ss_pred             hHHHHHhhccccCcccEEeeccC
Confidence            44433    34455666666533

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=95.19  E-value=0.03  Score=43.99  Aligned_cols=88  Identities=11%  Similarity=0.160  Sum_probs=60.7

Q ss_pred             CCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCC----
Q 018382          180 SGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPAN----  255 (357)
Q Consensus       180 ~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~----  255 (357)
                      .|+++.|+|.|.+|...+++++.+|.+|+..++.......... .+...   .   +.+.++....|+|..++.-.    
T Consensus        46 ~g~tvgIiG~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~-~~~~~---~---~~l~~ll~~sD~v~l~~plt~~T~  118 (191)
T d1gdha1          46 DNKTLGIYGFGSIGQALAKRAQGFDMDIDYFDTHRASSSDEAS-YQATF---H---DSLDSLLSVSQFFSLNAPSTPETR  118 (191)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSCCCHHHHHH-HTCEE---C---SSHHHHHHHCSEEEECCCCCTTTT
T ss_pred             cccceEEeecccchHHHHHHHHhhccccccccccccccchhhc-ccccc---c---CCHHHHHhhCCeEEecCCCCchHh
Confidence            4799999999999999999999999999998876543333333 22211   1   12344555688887765432    


Q ss_pred             CCh-HHHHhccccCCeEEEE
Q 018382          256 HPL-EPYLSLLKLDGKLILT  274 (357)
Q Consensus       256 ~~~-~~~~~~l~~~G~~v~~  274 (357)
                      ..+ ...++.|+++..+|.+
T Consensus       119 ~li~~~~l~~mk~~a~lIN~  138 (191)
T d1gdha1         119 YFFNKATIKSLPQGAIVVNT  138 (191)
T ss_dssp             TCBSHHHHTTSCTTEEEEEC
T ss_pred             heecHHHhhCcCCccEEEec
Confidence            122 3677888888888776

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.19  E-value=0.06  Score=41.16  Aligned_cols=97  Identities=14%  Similarity=0.097  Sum_probs=73.4

Q ss_pred             cccccchhhhhhhhhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChh
Q 018382          158 AAPLLCAGVTVFSPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDAT  236 (357)
Q Consensus       158 aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~  236 (357)
                      -+.+||.....+..|++.+.--.|++|+|+|. ..+|.-++.++...|++|+.........                   
T Consensus        16 ~~~~PcTp~aii~lL~~~~i~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~l-------------------   76 (170)
T d1a4ia1          16 DCFIPCTPKGCLELIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHL-------------------   76 (170)
T ss_dssp             SCCCCHHHHHHHHHHHTTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSH-------------------
T ss_pred             CCCCCChHHHHHHHHHHhCcccccceEEEEecCCccchHHHHHHHhccCceEEEecccccH-------------------
Confidence            45678887777777888776568999999996 7899999999999999999876532221                   


Q ss_pred             HHHHhhCCccEEEEcCCCCCChHHHHhccccCCeEEEEccC
Q 018382          237 RMQEAADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVI  277 (357)
Q Consensus       237 ~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~  277 (357)
                        .+.....|+++-++|.+..+.  .+.++++-.++++|..
T Consensus        77 --~~~~~~aDivi~a~G~~~~i~--~~~vk~g~iviDvgi~  113 (170)
T d1a4ia1          77 --DEEVNKGDILVVATGQPEMVK--GEWIKPGAIVIDCGIN  113 (170)
T ss_dssp             --HHHHTTCSEEEECCCCTTCBC--GGGSCTTCEEEECCCB
T ss_pred             --HHHHhhccchhhccccccccc--cccccCCCeEeccCcc
Confidence              233446888998888874443  4578888888888764

>d1p91a_ c.66.1.33 (A:) rRNA methyltransferase RlmA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: rRNA methyltransferase RlmA
domain: rRNA methyltransferase RlmA
species: Escherichia coli [TaxId: 562]

Probab=95.15  E-value=0.013  Score=48.87  Aligned_cols=95  Identities=19%  Similarity=0.128  Sum_probs=64.9

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHc-CCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCCC
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAM-GHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHP  257 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~-g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~  257 (357)
                      .++.+||=+|+|. |..+..+++.. +.+++.++.+++..+.+++.......+..+.. .+.-..+.+|+|+..-.-. .
T Consensus        83 ~~~~~iLDiGcG~-G~~~~~l~~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~d~~-~l~~~~~sfD~v~~~~~~~-~  159 (268)
T d1p91a_          83 DKATAVLDIGCGE-GYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSH-RLPFSDTSMDAIIRIYAPC-K  159 (268)
T ss_dssp             TTCCEEEEETCTT-STTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCTTSEEEECCTT-SCSBCTTCEEEEEEESCCC-C
T ss_pred             CCCCEEEEeCCCC-cHHHHHHHHHCCCCEEEEecchHhhhhhhhcccccccceeeehh-hccCCCCCEEEEeecCCHH-H
Confidence            5677888888753 56666777765 57999999999988888775543332222211 1111124799998755444 7


Q ss_pred             hHHHHhccccCCeEEEEcc
Q 018382          258 LEPYLSLLKLDGKLILTGV  276 (357)
Q Consensus       258 ~~~~~~~l~~~G~~v~~g~  276 (357)
                      +....+.|+|+|.++....
T Consensus       160 ~~e~~rvLkpgG~l~~~~p  178 (268)
T d1p91a_         160 AEELARVVKPGGWVITATP  178 (268)
T ss_dssp             HHHHHHHEEEEEEEEEEEE
T ss_pred             HHHHHHHhCCCcEEEEEee
Confidence            8899999999999987654

>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Methanothermus fervidus [TaxId: 2180]

Probab=95.13  E-value=0.13  Score=39.29  Aligned_cols=95  Identities=21%  Similarity=0.210  Sum_probs=61.4

Q ss_pred             eEEEEecChHHHHHHHHHHHcC-CeEEEEeC-C-cHHHHHHHHhcCCcEEEcCCChhH------------HHHhhCCccE
Q 018382          183 RGGILGLGGVGHMGVLIAKAMG-HHVTVISS-S-DKKRVEAMEHLGADQYLVSSDATR------------MQEAADSLDY  247 (357)
Q Consensus       183 ~VlI~G~g~~G~~ai~la~~~g-~~V~~~~~-~-~~~~~~~~~~~g~~~vv~~~~~~~------------~~~~~~~~d~  247 (357)
                      +|.|.|-|-+|..+++.+...+ .+++.+.. + ......+.+ ++.+......+...            ..++..++|+
T Consensus         3 ~VgINGfGRIGR~v~R~l~~~~di~vvaInd~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~v~g~~~~~~~~vDv   81 (171)
T d1cf2o1           3 AVAINGYGTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMALK-KGYDLYVAIPERVKLFEKAGIEVAGTVDDMLDEADI   81 (171)
T ss_dssp             EEEEECCSHHHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHHH-TTCCEEESSGGGHHHHHHTTCCCCEEHHHHHHTCSE
T ss_pred             EEEEEcCcHHHHHHHHHHHhCCCceEEEEecCCcHHHHHHHHh-cCCceEecccccceeecccCcccCCChhHhhcCCCE
Confidence            6889999999999999887665 47766643 2 234445555 66554433222111            1222237999


Q ss_pred             EEEcCCCCCChHHHHhccccCCeEEEEccCC
Q 018382          248 IIDTVPANHPLEPYLSLLKLDGKLILTGVIN  278 (357)
Q Consensus       248 v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~  278 (357)
                      |+||+|.....+.+-..+..+-+++..+.+.
T Consensus        82 ViEcTG~f~~~~~~~~hl~~G~K~vi~~~~~  112 (171)
T d1cf2o1          82 VIDCTPEGIGAKNLKMYKEKGIKAIFQGGEK  112 (171)
T ss_dssp             EEECCSTTHHHHHHHHHHHTTCEEEECTTSC
T ss_pred             EEEccCCCCCHHHHHHHHHcCCCEEEECCCC
Confidence            9999999745566767787777777765543

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.10  E-value=0.066  Score=40.64  Aligned_cols=88  Identities=17%  Similarity=0.186  Sum_probs=59.3

Q ss_pred             CeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCCChHHH
Q 018382          182 LRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPY  261 (357)
Q Consensus       182 ~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~  261 (357)
                      ++|-++|.|.+|..++.-+...|.+|++..++.++.+.+.. .+....-      ...+.....|+++.|+......+..
T Consensus         2 ~kIg~IGlG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~-~~~~~~~------~~~e~~~~~diii~~v~~~~~~~~v   74 (162)
T d3cuma2           2 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVA-AGASAAR------SARDAVQGADVVISMLPASQHVEGL   74 (162)
T ss_dssp             CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHH-TTCEECS------SHHHHHTSCSEEEECCSCHHHHHHH
T ss_pred             CEEEEEEEHHHHHHHHHHHHHCCCeEEEEECchhhhhhhhh-hhccccc------hhhhhccccCeeeecccchhhHHHH
Confidence            36888999999999888888889999999999998888877 6653221      1234445677777777765333322


Q ss_pred             -------HhccccCCeEEEEcc
Q 018382          262 -------LSLLKLDGKLILTGV  276 (357)
Q Consensus       262 -------~~~l~~~G~~v~~g~  276 (357)
                             ...+.++-.++..+.
T Consensus        75 ~~~~~~~~~~l~~g~iiid~st   96 (162)
T d3cuma2          75 YLDDDGLLAHIAPGTLVLECST   96 (162)
T ss_dssp             HHSTTCHHHHSCTTCEEEECSC
T ss_pred             HhccccccccCCCCCEEEECCC
Confidence                   223445555555543

>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative oxidoreductase VCA1048
species: Vibrio cholerae [TaxId: 666]

Probab=95.08  E-value=0.065  Score=40.85  Aligned_cols=133  Identities=8%  Similarity=0.004  Sum_probs=79.5

Q ss_pred             eEEEEecChHHHH-HHHHHHHc-CCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCCChHH
Q 018382          183 RGGILGLGGVGHM-GVLIAKAM-GHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEP  260 (357)
Q Consensus       183 ~VlI~G~g~~G~~-ai~la~~~-g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~  260 (357)
                      +|.|+|+|.+|.- .+..++.. +.++++.++++++.+.+.+.++...+++.- .+.+   ...+|+|+-++........
T Consensus         3 rvgiiG~G~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~-~~ll---~~~iD~V~I~tp~~~H~~~   78 (167)
T d1xeaa1           3 KIAMIGLGDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRYRVSATCTDY-RDVL---QYGVDAVMIHAATDVHSTL   78 (167)
T ss_dssp             EEEEECCCHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHHTTCCCCCSST-TGGG---GGCCSEEEECSCGGGHHHH
T ss_pred             EEEEEcCCHHHHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHhcccccccccH-HHhc---ccccceecccccccccccc
Confidence            5789999999964 55666555 458777778888888887778865443221 1222   2379999998888756667


Q ss_pred             HHhccccCCeEEEEccCCCCcc---cchHHH-hhccceEEEEeecCHHHHHHHHHHHHhcCCCc
Q 018382          261 YLSLLKLDGKLILTGVINTPMQ---FLTPMV-MLGRKAITGSFIGSMKETKEMLEFCREKGVTS  320 (357)
Q Consensus       261 ~~~~l~~~G~~v~~g~~~~~~~---~~~~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~  320 (357)
                      +..++..+ +=|.+.-+.....   ..+... -.++..+.-.+......+.++.+.+..|++-.
T Consensus        79 ~~~al~~g-k~V~~EKP~~~~~~e~~~l~~~a~~~~~~~~vg~~r~~~~~~~~~~~~~~G~ig~  141 (167)
T d1xeaa1          79 AAFFLHLG-IPTFVDKPLAASAQECENLYELAEKHHQPLYVGFNGFDAMVQDWLQVAAAGKLPT  141 (167)
T ss_dssp             HHHHHHTT-CCEEEESCSCSSHHHHHHHHHHHHHTTCCEEEECGTHHHHHHHHHHHHHHTCCCH
T ss_pred             cccccccc-cccccCCCCcCCHHHHHHHHHHHHHcCCEEEEEeCcCCHHHHHHHHHhhcCCCCc
Confidence            77777765 4355544332211   112222 22333332222222244677777888888764

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=95.07  E-value=0.046  Score=44.12  Aligned_cols=50  Identities=24%  Similarity=0.278  Sum_probs=44.0

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcE
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQ  228 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~  228 (357)
                      -.|.+|+|.|.|.+|..+++++...|++|++++.+..+.+.+....|...
T Consensus        37 l~g~~v~IqG~GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~~g~~~   86 (230)
T d1leha1          37 LEGLAVSVQGLGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGADA   86 (230)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCCEE
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHhcCCcc
Confidence            36899999999999999999999999999999988888877777677653

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=95.04  E-value=0.068  Score=40.40  Aligned_cols=92  Identities=16%  Similarity=0.262  Sum_probs=54.8

Q ss_pred             CeEEEEecChHHH-HHHHHHHHcCC-eEEEEeCCc-H--HHHHHHHhcCCcEEEcCCChhHHHHh-h-CCccEEEEcCCC
Q 018382          182 LRGGILGLGGVGH-MGVLIAKAMGH-HVTVISSSD-K--KRVEAMEHLGADQYLVSSDATRMQEA-A-DSLDYIIDTVPA  254 (357)
Q Consensus       182 ~~VlI~G~g~~G~-~ai~la~~~g~-~V~~~~~~~-~--~~~~~~~~~g~~~vv~~~~~~~~~~~-~-~~~d~v~d~~g~  254 (357)
                      -+|.|+|+|.+|. .++++++.... +++++++.+ +  ...++++ +|.....  ...+.+.+. . .++|+||+++..
T Consensus         5 irvaIIGaG~ig~~~~~~~l~~~~~~el~avas~~~~~~~~~~a~~-~~i~~~~--~~~d~l~~~~~~~~iDiVf~ATpa   81 (157)
T d1nvmb1           5 LKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQR-MGVTTTY--AGVEGLIKLPEFADIDFVFDATSA   81 (157)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHH-TTCCEES--SHHHHHHHSGGGGGEEEEEECSCH
T ss_pred             cEEEEEcCcHHHHHHHHHHHhhCCcceEEEEEecchhccchhhhhh-cCCcccc--cceeeeeecccccccCEEEEcCCc
Confidence            4689999999987 56788876654 787776432 2  2344555 8865432  222222222 2 379999998875


Q ss_pred             CCChHH--HHhccccCCeEEEEcc
Q 018382          255 NHPLEP--YLSLLKLDGKLILTGV  276 (357)
Q Consensus       255 ~~~~~~--~~~~l~~~G~~v~~g~  276 (357)
                      ......  +.+.++.|-.+++...
T Consensus        82 g~h~~~~~~~~aa~~G~~VID~s~  105 (157)
T d1nvmb1          82 SAHVQNEALLRQAKPGIRLIDLTP  105 (157)
T ss_dssp             HHHHHHHHHHHHHCTTCEEEECST
T ss_pred             hhHHHhHHHHHHHHcCCEEEEccc
Confidence            423333  3344555556666654

>d1u2za_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.94  E-value=0.037  Score=48.80  Aligned_cols=106  Identities=22%  Similarity=0.158  Sum_probs=68.2

Q ss_pred             hhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHh----------cC----CcEE-Ec
Q 018382          168 VFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEH----------LG----ADQY-LV  231 (357)
Q Consensus       168 a~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~----------~g----~~~v-v~  231 (357)
                      ...++.++.. ++|+++|=+|+| +|..++++|+..|+ +|++++-++...+.+++.          +|    .... +.
T Consensus       205 i~~Il~~l~L-kpgd~fLDLGCG-~G~~vl~aA~~~g~~~v~GIDiS~~~i~~Ak~~~~e~~~~~~~~g~~~~~~~~~~~  282 (406)
T d1u2za_         205 LSDVYQQCQL-KKGDTFMDLGSG-VGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLK  282 (406)
T ss_dssp             HHHHHHHTTC-CTTCEEEEESCT-TSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEES
T ss_pred             HHHHHHHhCC-CCCCEEEeCCCC-CcHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHHhhhhhhhccccccceeeee
Confidence            3445555554 999999999986 48889999999987 899999998765554431          12    1111 11


Q ss_pred             C--CChhHHHHhhCCccEEEEc-CCC-C---CChHHHHhccccCCeEEEEc
Q 018382          232 S--SDATRMQEAADSLDYIIDT-VPA-N---HPLEPYLSLLKLDGKLILTG  275 (357)
Q Consensus       232 ~--~~~~~~~~~~~~~d~v~d~-~g~-~---~~~~~~~~~l~~~G~~v~~g  275 (357)
                      .  .+.+........+|+++-. .-. .   ..+...++.|+|||+++...
T Consensus       283 ~~f~~~~~~d~~~~~adVV~inn~~f~~~l~~~L~ei~r~LKPGGrIVs~~  333 (406)
T d1u2za_         283 KSFVDNNRVAELIPQCDVILVNNFLFDEDLNKKVEKILQTAKVGCKIISLK  333 (406)
T ss_dssp             SCSTTCHHHHHHGGGCSEEEECCTTCCHHHHHHHHHHHTTCCTTCEEEESS
T ss_pred             echhhccccccccccceEEEEecccCchHHHHHHHHHHHhcCCCcEEEEec
Confidence            1  1123344444568888742 211 1   13557788999999998764

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=94.86  E-value=0.14  Score=39.29  Aligned_cols=94  Identities=20%  Similarity=0.192  Sum_probs=61.8

Q ss_pred             CeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCc--EEEcCCChhHHHHhhCCccEEEEcCCCCCCh-
Q 018382          182 LRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGAD--QYLVSSDATRMQEAADSLDYIIDTVPANHPL-  258 (357)
Q Consensus       182 ~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~--~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~~-  258 (357)
                      .+|-|+|.|.+|..++.-+...|.+|++..+++++.+.+.+ -++.  ........+.+.+.....|.++.++...... 
T Consensus         3 ~nIg~IGlG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~-~~~~~~~~~~a~~~~~~~~~~~~~~~ii~~~~~~~~v~   81 (176)
T d2pgda2           3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLA-NEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAGQAVD   81 (176)
T ss_dssp             BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHH-TTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTTHHHH
T ss_pred             CcEEEEeEhHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHH-hccccccccchhhhhhhhhhhcccceEEEecCchHHHH
Confidence            57889999999999999888889999999999999988877 3321  1111222233444445677777766654222 


Q ss_pred             ---HHHHhccccCCeEEEEcc
Q 018382          259 ---EPYLSLLKLDGKLILTGV  276 (357)
Q Consensus       259 ---~~~~~~l~~~G~~v~~g~  276 (357)
                         +.+...++++-.++..+.
T Consensus        82 ~v~~~l~~~~~~g~iiid~sT  102 (176)
T d2pgda2          82 NFIEKLVPLLDIGDIIIDGGN  102 (176)
T ss_dssp             HHHHHHHHHCCTTCEEEECSC
T ss_pred             HHHHHHHhccccCcEEEecCc
Confidence               234445555656665543

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=94.86  E-value=0.022  Score=41.00  Aligned_cols=44  Identities=9%  Similarity=0.109  Sum_probs=36.6

Q ss_pred             hhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCc
Q 018382          170 SPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSD  214 (357)
Q Consensus       170 ~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~  214 (357)
                      ..+..+.. .++++|+|.|+|.+|+=++..++..|.+|.++.+.+
T Consensus        12 ~~~~~l~~-~~~~~vvVvGgG~ig~E~A~~l~~~g~~vt~i~~~~   55 (121)
T d1mo9a2          12 TLVEELDY-EPGSTVVVVGGSKTAVEYGCFFNATGRRTVMLVRTE   55 (121)
T ss_dssp             HHHHHCCS-CCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             HHHHHHhh-CCCCEEEEECCCHHHHHHHHHHHhcchhheEeeccc
Confidence            33334444 788999999999999999999999999999998764

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=94.82  E-value=0.25  Score=37.97  Aligned_cols=91  Identities=14%  Similarity=0.089  Sum_probs=59.5

Q ss_pred             eEEEEecChHHHHHHHHHHHc-CCeEEEE-eCCcHHHHHHHHhcCC---cEEEcCCChhHHHHhhCCccEEEEcCCCCCC
Q 018382          183 RGGILGLGGVGHMGVLIAKAM-GHHVTVI-SSSDKKRVEAMEHLGA---DQYLVSSDATRMQEAADSLDYIIDTVPANHP  257 (357)
Q Consensus       183 ~VlI~G~g~~G~~ai~la~~~-g~~V~~~-~~~~~~~~~~~~~~g~---~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~  257 (357)
                      ++.|+|+|.+|...++.++.. +.+++++ ++++++.+.+.++++.   ..++  ++.+.+.+ ...+|+|+-++.....
T Consensus         3 ki~iIG~G~~g~~~~~~l~~~~~~~i~ai~d~~~~~~~~~~~~~~~~~~~~~~--~~~~~ll~-~~~iD~v~I~tp~~~h   79 (184)
T d1ydwa1           3 RIGVMGCADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYPESTKIH--GSYESLLE-DPEIDALYVPLPTSLH   79 (184)
T ss_dssp             EEEEESCCTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCCTTCEEE--SSHHHHHH-CTTCCEEEECCCGGGH
T ss_pred             EEEEEcCCHHHHHHHHHHHhCCCCEEEEEEeCCccccccchhccccccceeec--CcHHHhhh-ccccceeeecccchhh
Confidence            578899999999888888776 5688766 4555666666666774   2232  22221111 2379999998888756


Q ss_pred             hHHHHhccccCCeEEEEccC
Q 018382          258 LEPYLSLLKLDGKLILTGVI  277 (357)
Q Consensus       258 ~~~~~~~l~~~G~~v~~g~~  277 (357)
                      .+.+..++..+ +=|.+.-+
T Consensus        80 ~~~~~~~l~~g-~~v~~EKP   98 (184)
T d1ydwa1          80 VEWAIKAAEKG-KHILLEKP   98 (184)
T ss_dssp             HHHHHHHHTTT-CEEEECSS
T ss_pred             cchhhhhhhcc-ceeecccc
Confidence            66777777765 55556443

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=94.76  E-value=0.018  Score=50.04  Aligned_cols=75  Identities=12%  Similarity=0.110  Sum_probs=51.6

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCc-EEEcCCChhHHHHhhCCccEEEEcCCCC
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGAD-QYLVSSDATRMQEAADSLDYIIDTVPAN  255 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~~~~~~d~v~d~~g~~  255 (357)
                      .+-+|||+|+ |-+|..++..+...|.+|+++++....... ....... ...|..+.+.+.....++|.|+.+++..
T Consensus        14 ~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~d~Vih~a~~~   90 (363)
T d2c5aa1          14 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMT-EDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAADM   90 (363)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSC-GGGTCSEEEECCTTSHHHHHHHHTTCSEEEECCCCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccchh-hhcccCcEEEeechhHHHHHHHhhcCCeEeeccccc
Confidence            4678999987 999999999999999999998765332111 1101111 2345555556666667999999987554

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=94.62  E-value=0.23  Score=36.93  Aligned_cols=91  Identities=15%  Similarity=0.256  Sum_probs=60.5

Q ss_pred             CeEEEEec-ChHHHHHHHHHHHc--CCeEEEEeCCcH--HHHHHHHhcCCcEEEcCCCh--hH-----------------
Q 018382          182 LRGGILGL-GGVGHMGVLIAKAM--GHHVTVISSSDK--KRVEAMEHLGADQYLVSSDA--TR-----------------  237 (357)
Q Consensus       182 ~~VlI~G~-g~~G~~ai~la~~~--g~~V~~~~~~~~--~~~~~~~~~g~~~vv~~~~~--~~-----------------  237 (357)
                      ++|.|+|+ |.+|..++++.+..  ..+|++.+....  .+....++|....++-.++.  ..                 
T Consensus         3 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~N~~~L~~q~~ef~Pk~v~i~d~~~~~~l~~~~~~~~~~v~~g~~   82 (150)
T d1r0ka2           3 RTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNVKDLADAAKRTNAKRAVIADPSLYNDLKEALAGSSVEAAAGAD   82 (150)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESSCHHHHHHHHHHTTCSEEEESCGGGHHHHHHHTTTCSSEEEESHH
T ss_pred             cEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCCCHHHHHHHHHhhccccceeccHHHHHHHHHHhhhcccccccCcc
Confidence            68999998 99999999999876  357777764433  34434444887776544332  11                 


Q ss_pred             -HHHhh-CCccEEEEcCCCCCChHHHHhccccCCeEE
Q 018382          238 -MQEAA-DSLDYIIDTVPANHPLEPYLSLLKLDGKLI  272 (357)
Q Consensus       238 -~~~~~-~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v  272 (357)
                       +.++. ..+|+|+.+..+...+...+..++.+-++.
T Consensus        83 ~l~~~~~~~~D~vv~Ai~G~~GL~~tl~ai~~gk~ia  119 (150)
T d1r0ka2          83 ALVEAAMMGADWTMAAIIGCAGLKATLAAIRKGKTVA  119 (150)
T ss_dssp             HHHHHHTSCCSEEEECCCSGGGHHHHHHHHHTTSEEE
T ss_pred             chheecccccceeeeecCchhHHHHHHHHHhcCCEEE
Confidence             11111 258999888766657777888887776644

>d1iy9a_ c.66.1.17 (A:) Spermidine synthase {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Bacillus subtilis [TaxId: 1423]

Probab=94.60  E-value=0.042  Score=45.80  Aligned_cols=96  Identities=17%  Similarity=0.123  Sum_probs=63.1

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcC----C-----cEEEcCCChhHHHHhhCCccEE
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLG----A-----DQYLVSSDATRMQEAADSLDYI  248 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g----~-----~~vv~~~~~~~~~~~~~~~d~v  248 (357)
                      ...++|||+|+|. |..+..+++..+. +|.++.-.++-.+.+++.++    +     ..++..+...++++..+.+|+|
T Consensus        74 ~~p~~vLiiGgG~-G~~~~~~l~~~~~~~i~~VEID~~Vi~~a~~~~~~~~~~~~d~r~~i~~~D~~~~l~~~~~~yDvI  152 (274)
T d1iy9a_          74 PNPEHVLVVGGGD-GGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVI  152 (274)
T ss_dssp             SSCCEEEEESCTT-CHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEE
T ss_pred             CCcceEEecCCCC-cHHHHHHHhcCCcceEEEecCCHHHHHHHHHhChhhcccccCCCeEEEechHHHHHhhcCCCCCEE
Confidence            3457999997643 4455566777665 89998888776666666442    1     2344444455666666689999


Q ss_pred             E-EcCC---------CCCChHHHHhccccCCeEEEEc
Q 018382          249 I-DTVP---------ANHPLEPYLSLLKLDGKLILTG  275 (357)
Q Consensus       249 ~-d~~g---------~~~~~~~~~~~l~~~G~~v~~g  275 (357)
                      + |...         +.+.++.+.++|+++|.++.-.
T Consensus       153 i~D~~~p~~~~~~L~t~eFy~~~~~~L~~~Gv~v~q~  189 (274)
T d1iy9a_         153 MVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQT  189 (274)
T ss_dssp             EESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEEC
T ss_pred             EEcCCCCCCcchhhccHHHHHHHHhhcCCCceEEEec
Confidence            6 3322         1123677888999999998754

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=94.53  E-value=0.037  Score=45.77  Aligned_cols=58  Identities=16%  Similarity=0.113  Sum_probs=42.9

Q ss_pred             eEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhC--CccEEEEcCCCC
Q 018382          183 RGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAAD--SLDYIIDTVPAN  255 (357)
Q Consensus       183 ~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~--~~d~v~d~~g~~  255 (357)
                      +|||+|+ |-+|..++..++..|.+|+++++++               +|..+.+.+++...  .+|+|+.+++..
T Consensus         3 KIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~---------------~D~~d~~~~~~~l~~~~~d~vih~a~~~   63 (281)
T d1vl0a_           3 KILITGANGQLGREIQKQLKGKNVEVIPTDVQD---------------LDITNVLAVNKFFNEKKPNVVINCAAHT   63 (281)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT---------------CCTTCHHHHHHHHHHHCCSEEEECCCCC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeechh---------------ccCCCHHHHHHHHHHcCCCEEEeecccc
Confidence            5899987 9999999999999999999988752               23344444444332  678888887665

>d1dssg1 c.2.1.3 (G:1-148,G:313-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {South China Sea lobster (Palinurus versicolor) [TaxId: 150436]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: South China Sea lobster (Palinurus versicolor) [TaxId: 150436]

Probab=94.47  E-value=0.04  Score=42.20  Aligned_cols=95  Identities=16%  Similarity=0.241  Sum_probs=64.7

Q ss_pred             eEEEEecChHHHHHHHHHHHcCCeEEEEeCC---cHHHHHHHHhcC-------Cc------E---------EEcCCChhH
Q 018382          183 RGGILGLGGVGHMGVLIAKAMGHHVTVISSS---DKKRVEAMEHLG-------AD------Q---------YLVSSDATR  237 (357)
Q Consensus       183 ~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~---~~~~~~~~~~~g-------~~------~---------vv~~~~~~~  237 (357)
                      +|.|.|-|-+|.++.+.+...+.+|+++-..   .+....+.+ +-       .+      .         +.+.++++.
T Consensus         2 kIgINGfGRIGR~~~R~~~~~~~~ivaINd~~~~~~~~~yLlk-yDS~hG~~~~~i~~~~~~l~ing~~I~~~~~~~p~~   80 (169)
T d1dssg1           2 KIGINGFGRIGRLVLRAALEMGAQVVAVNDPFIALEYMVYMFK-YDSTHGMFKGEVKAEDGALVVDGKKITVFNEMKPEN   80 (169)
T ss_dssp             CEEEECCSHHHHHHHHHHHHHTCCEEEEECTTSCHHHHHHHHH-CCTTTCCCSSCEEEETTEEEETTEEEEEECCSSGGG
T ss_pred             eEEEECCcHHHHHHHHHHHhCCCcEEEECCCCcCHHHHHHHHh-cccccCCcCCeEEEeCCEEEECCEEEEEEecCChHH
Confidence            5788999999999999988778888777542   234555555 32       11      1         112223333


Q ss_pred             HHHhhCCccEEEEcCCCCCChHHHHhccccCCeEEEEccCC
Q 018382          238 MQEAADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVIN  278 (357)
Q Consensus       238 ~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~  278 (357)
                      +.+...++|+|+||+|.....+.+...+..+-+-|.+..+.
T Consensus        81 i~W~~~gvD~ViEcTG~f~~~~~~~~hl~~gakkViisaP~  121 (169)
T d1dssg1          81 IPWSKAGAEYIVESTGVFTTIEKASAHFKGGAKKVIISAPS  121 (169)
T ss_dssp             CCHHHHTCCEEEECSSSCCSHHHHGGGGTTTCSEEEESSCC
T ss_pred             CCccccCCCEEEecCceEcCHHHHHHHHhcCCceEeecCCc
Confidence            33334489999999999867778888898887777776554

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.41  E-value=0.0048  Score=52.82  Aligned_cols=70  Identities=20%  Similarity=0.098  Sum_probs=43.9

Q ss_pred             CeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCc-HHHHHHHHhcCC--cEEEcCCChhHHHHhhCCccEEEEcCCC
Q 018382          182 LRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSD-KKRVEAMEHLGA--DQYLVSSDATRMQEAADSLDYIIDTVPA  254 (357)
Q Consensus       182 ~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~-~~~~~~~~~~g~--~~vv~~~~~~~~~~~~~~~d~v~d~~g~  254 (357)
                      ++|||+|+ |-+|..++..+...|.+|+++++.. .+.+.+......  -.+.+.   +.++.+..++|+||.+++.
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~d~~~~---~~~~~~~~~~d~VihlAa~   75 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINH---DVVEPLYIEVDQIYHLASP   75 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEEC---CTTSCCCCCCSEEEECCSC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHHHhcCCCceEEEeh---HHHHHHHcCCCEEEECccc
Confidence            67999987 9999999999988899999987422 122222110111  122222   2233333479999998764

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=94.38  E-value=0.021  Score=44.65  Aligned_cols=36  Identities=14%  Similarity=0.218  Sum_probs=31.4

Q ss_pred             CCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcH
Q 018382          180 SGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDK  215 (357)
Q Consensus       180 ~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~  215 (357)
                      .+++|+|+|+|+.|+.++..+...|. .|+++.+++.
T Consensus         3 ~~~kVaIIGaGpaGl~aA~~l~~~G~~~V~v~E~~~~   39 (196)
T d1gtea4           3 YSAKIALLGAGPASISCASFLARLGYSDITIFEKQEY   39 (196)
T ss_dssp             GGCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred             CCCEEEEECChHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence            36889999999999999999999999 5888887653

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=94.35  E-value=0.036  Score=43.87  Aligned_cols=85  Identities=21%  Similarity=0.253  Sum_probs=57.9

Q ss_pred             CCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCC---
Q 018382          180 SGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANH---  256 (357)
Q Consensus       180 ~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~---  256 (357)
                      .+++|.|+|.|.+|..++++++.+|++|++.++...+..     ......      ..++++....|+|.-++....   
T Consensus        44 ~~ktvgIiG~G~IG~~va~~l~~fg~~v~~~d~~~~~~~-----~~~~~~------~~l~~l~~~~D~v~~~~plt~~T~  112 (199)
T d1dxya1          44 GQQTVGVMGTGHIGQVAIKLFKGFGAKVIAYDPYPMKGD-----HPDFDY------VSLEDLFKQSDVIDLHVPGIEQNT  112 (199)
T ss_dssp             GGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSSC-----CTTCEE------CCHHHHHHHCSEEEECCCCCGGGT
T ss_pred             cceeeeeeecccccccccccccccceeeeccCCccchhh-----hcchhH------HHHHHHHHhcccceeeeccccccc
Confidence            468999999999999999999999999999987533210     011111      123444456788877654421   


Q ss_pred             --ChHHHHhccccCCeEEEEc
Q 018382          257 --PLEPYLSLLKLDGKLILTG  275 (357)
Q Consensus       257 --~~~~~~~~l~~~G~~v~~g  275 (357)
                        .-...++.|+++..++.++
T Consensus       113 ~li~~~~l~~mk~~a~lIN~a  133 (199)
T d1dxya1         113 HIINEAAFNLMKPGAIVINTA  133 (199)
T ss_dssp             TSBCHHHHHHSCTTEEEEECS
T ss_pred             ccccHHHhhccCCceEEEecc
Confidence              2245778888888887763

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=94.33  E-value=0.056  Score=45.85  Aligned_cols=72  Identities=14%  Similarity=-0.014  Sum_probs=47.6

Q ss_pred             eEEEEec-ChHHHHHHHHHHHcCCeEEEEeC--CcH---HHHHHHHhcC-CcEE-EcCCChhHHHHhhC--CccEEEEcC
Q 018382          183 RGGILGL-GGVGHMGVLIAKAMGHHVTVISS--SDK---KRVEAMEHLG-ADQY-LVSSDATRMQEAAD--SLDYIIDTV  252 (357)
Q Consensus       183 ~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~--~~~---~~~~~~~~~g-~~~v-v~~~~~~~~~~~~~--~~d~v~d~~  252 (357)
                      +|||+|+ |-+|..+++.+...|.+|+++++  ...   +...+.. .+ ...+ .|..+.+.+.++..  .+|+||.++
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~-~~~~~~i~~Di~~~~~l~~~~~~~~~d~Vih~a   80 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSS-LGNFEFVHGDIRNKNDVTRLITKYMPDSCFHLA   80 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHT-TCCCEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhc-cCCcEEEEcccCCHHHHHHHHHhcCCceEEeec
Confidence            6999987 99999999999888999999862  111   2223333 33 2222 34455555555543  689999988


Q ss_pred             CCC
Q 018382          253 PAN  255 (357)
Q Consensus       253 g~~  255 (357)
                      +..
T Consensus        81 a~~   83 (338)
T d1orra_          81 GQV   83 (338)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            753

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=94.29  E-value=0.065  Score=46.88  Aligned_cols=74  Identities=15%  Similarity=0.069  Sum_probs=47.7

Q ss_pred             CCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCc--------------------HHHHHHHHhcC--CcE-EEcCCChh
Q 018382          181 GLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSD--------------------KKRVEAMEHLG--ADQ-YLVSSDAT  236 (357)
Q Consensus       181 ~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~--------------------~~~~~~~~~~g--~~~-vv~~~~~~  236 (357)
                      |.+|||+|+ |-+|..+++.+...|.+|++++.-.                    +.........+  .+. ..|..+.+
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~   80 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFE   80 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCHH
Confidence            679999987 9999999999999999999986211                    11111111112  121 23555566


Q ss_pred             HHHHhhC--CccEEEEcCCC
Q 018382          237 RMQEAAD--SLDYIIDTVPA  254 (357)
Q Consensus       237 ~~~~~~~--~~d~v~d~~g~  254 (357)
                      .++.+..  .+|+||..++-
T Consensus        81 ~l~~~~~~~~~d~ViHlAa~  100 (393)
T d1i24a_          81 FLAESFKSFEPDSVVHFGEQ  100 (393)
T ss_dssp             HHHHHHHHHCCSEEEECCSC
T ss_pred             HHHHHHHhhcchheeccccc
Confidence            6666543  68999998864

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=94.06  E-value=0.34  Score=32.97  Aligned_cols=71  Identities=15%  Similarity=0.246  Sum_probs=49.5

Q ss_pred             CCCCeEEEEecChHHHHH-HHHHHHcCCeEEEEeCCcHH-HHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCC
Q 018382          179 QSGLRGGILGLGGVGHMG-VLIAKAMGHHVTVISSSDKK-RVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPAN  255 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~a-i~la~~~g~~V~~~~~~~~~-~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~  255 (357)
                      +..+++.++|-|++|..+ +++++..|.+|...+..+.. .+.+.+ .|..... .+.++.    ..+.|.|+-+.+-+
T Consensus         6 ~~~~~ihfiGigG~GMs~LA~~L~~~G~~VsGSD~~~~~~~~~L~~-~Gi~v~~-g~~~~~----i~~~d~vV~S~AI~   78 (96)
T d1p3da1           6 RRVQQIHFIGIGGAGMSGIAEILLNEGYQISGSDIADGVVTQRLAQ-AGAKIYI-GHAEEH----IEGASVVVVSSAIK   78 (96)
T ss_dssp             TTCCEEEEETTTSTTHHHHHHHHHHHTCEEEEEESCCSHHHHHHHH-TTCEEEE-SCCGGG----GTTCSEEEECTTSC
T ss_pred             hhCCEEEEEEECHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHH-CCCeEEE-CCcccc----CCCCCEEEECCCcC
Confidence            567889999988888776 89999999999999987553 445555 7876433 333322    24678887665544

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=94.06  E-value=0.12  Score=42.79  Aligned_cols=32  Identities=16%  Similarity=0.011  Sum_probs=26.7

Q ss_pred             EEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcH
Q 018382          184 GGILGL-GGVGHMGVLIAKAMGHHVTVISSSDK  215 (357)
Q Consensus       184 VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~  215 (357)
                      +||+|+ +++|.+.++.+...|++|++..++.+
T Consensus         5 AlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~   37 (284)
T d1e7wa_           5 ALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSA   37 (284)
T ss_dssp             EEETTCSSHHHHHHHHHHHHTTCEEEEEESSCH
T ss_pred             EEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCH
Confidence            467786 99999999999999999998876543

>d2o07a1 c.66.1.17 (A:16-300) Spermidine synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.06  E-value=0.055  Score=45.30  Aligned_cols=95  Identities=21%  Similarity=0.164  Sum_probs=60.2

Q ss_pred             CCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcC---------CcEEEcCCChhHHHHhhCCccEEE
Q 018382          180 SGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLG---------ADQYLVSSDATRMQEAADSLDYII  249 (357)
Q Consensus       180 ~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g---------~~~vv~~~~~~~~~~~~~~~d~v~  249 (357)
                      .-++|||+|+|. |..+-.+++..+. +|+++.-.++-.+.+++.+.         -.+++..+...++++..+.+|+|+
T Consensus        78 ~pk~vLiiGgG~-G~~~~~~l~~~~~~~v~~vEiD~~Vv~~a~~~~~~~~~~~~d~rv~i~~~Da~~~l~~~~~~yDvIi  156 (285)
T d2o07a1          78 NPRKVLIIGGGD-GGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVII  156 (285)
T ss_dssp             SCCEEEEEECTT-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEE
T ss_pred             CcCeEEEeCCCc-hHHHHHHHHcCCcceeeeccCCHHHHHHHHhhchhhccccCCCCceEEEccHHHHHhcCCCCCCEEE
Confidence            447899998653 3445566776655 88888887776666666442         123333333455665556899996


Q ss_pred             -EcCCC---------CCChHHHHhccccCCeEEEEc
Q 018382          250 -DTVPA---------NHPLEPYLSLLKLDGKLILTG  275 (357)
Q Consensus       250 -d~~g~---------~~~~~~~~~~l~~~G~~v~~g  275 (357)
                       |....         .+.++.+.+.|+++|.++.-.
T Consensus       157 ~D~~~p~~~~~~L~t~eF~~~~~~~L~~~Gi~v~q~  192 (285)
T d2o07a1         157 TDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQG  192 (285)
T ss_dssp             EECC-----------CHHHHHHHHHEEEEEEEEEEE
T ss_pred             EcCCCCCCcccccccHHHHHHHHHhcCCCCeEEEec
Confidence             43221         123667788999999988754

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=94.05  E-value=0.075  Score=43.16  Aligned_cols=91  Identities=15%  Similarity=0.076  Sum_probs=59.8

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc---CC-cEEEcCCChhHHHHhhCCccEEEEcCCC
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL---GA-DQYLVSSDATRMQEAADSLDYIIDTVPA  254 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~---g~-~~vv~~~~~~~~~~~~~~~d~v~d~~g~  254 (357)
                      .+.++||=+|+|. |..+..+++ .|++|++++.+++-.+.+++++   +. ..++..+-.+ + ...+.+|+|+-..+.
T Consensus        40 ~~~~~iLDiGcGt-G~~~~~l~~-~~~~v~gvD~s~~mi~~a~~~~~~~~~~i~~~~~d~~~-l-~~~~~fD~I~~~~~~  115 (251)
T d1wzna1          40 REVRRVLDLACGT-GIPTLELAE-RGYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLE-I-AFKNEFDAVTMFFST  115 (251)
T ss_dssp             SCCCEEEEETCTT-CHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGG-C-CCCSCEEEEEECSSG
T ss_pred             CCCCEEEEeCCCC-Cccchhhcc-cceEEEEEeeccccccccccccccccccchheehhhhh-c-ccccccchHhhhhhh
Confidence            6778999999864 777777776 5889999999988777666533   22 1223222111 1 122479998865332


Q ss_pred             C---------CChHHHHhccccCCeEEE
Q 018382          255 N---------HPLEPYLSLLKLDGKLIL  273 (357)
Q Consensus       255 ~---------~~~~~~~~~l~~~G~~v~  273 (357)
                      -         ..+..+.++|+|+|.++.
T Consensus       116 ~~~~~~~~~~~~L~~~~~~LkpgG~lii  143 (251)
T d1wzna1         116 IMYFDEEDLRKLFSKVAEALKPGGVFIT  143 (251)
T ss_dssp             GGGSCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred             hhcCChHHHHHHHHHHHHHcCCCcEEEE
Confidence            1         135568889999999875

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=94.05  E-value=0.08  Score=45.23  Aligned_cols=73  Identities=15%  Similarity=0.069  Sum_probs=48.7

Q ss_pred             eEEEEec-ChHHHHHHHHHHHcCCeEEEEeCC----cHHHHHHHHh--cCCcEE-EcCCChhHHHHhhC--CccEEEEcC
Q 018382          183 RGGILGL-GGVGHMGVLIAKAMGHHVTVISSS----DKKRVEAMEH--LGADQY-LVSSDATRMQEAAD--SLDYIIDTV  252 (357)
Q Consensus       183 ~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~----~~~~~~~~~~--~g~~~v-v~~~~~~~~~~~~~--~~d~v~d~~  252 (357)
                      +|||+|+ |-+|..++..+...|.+|+++++.    .+........  -+...+ .|..+.+.+.++..  ++|+||.++
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~ViHlA   81 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHFA   81 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEECC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhccCCCEEEECC
Confidence            5899987 999999999999899999998642    2222222221  123322 35556666665543  899999988


Q ss_pred             CCC
Q 018382          253 PAN  255 (357)
Q Consensus       253 g~~  255 (357)
                      +..
T Consensus        82 a~~   84 (338)
T d1udca_          82 GLK   84 (338)
T ss_dssp             SCC
T ss_pred             Ccc
Confidence            643

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=94.03  E-value=0.046  Score=38.99  Aligned_cols=35  Identities=17%  Similarity=0.126  Sum_probs=31.7

Q ss_pred             CCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCc
Q 018382          180 SGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSD  214 (357)
Q Consensus       180 ~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~  214 (357)
                      ..++++|+|+|.+|+-+++.+..+|.+|+++.+.+
T Consensus        21 ~p~~v~IiGgG~ig~E~A~~l~~~G~~Vtlve~~~   55 (117)
T d1ebda2          21 VPKSLVVIGGGYIGIELGTAYANFGTKVTILEGAG   55 (117)
T ss_dssp             CCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             cCCeEEEECCCccceeeeeeecccccEEEEEEecc
Confidence            34789999999999999999999999999998764

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.00  E-value=0.05  Score=42.69  Aligned_cols=40  Identities=20%  Similarity=0.267  Sum_probs=35.0

Q ss_pred             CeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHH
Q 018382          182 LRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAM  221 (357)
Q Consensus       182 ~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~  221 (357)
                      ++|.|+|+|.+|...++++...|.+|++.+++++..+.+.
T Consensus         5 kkvaViGaG~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~   44 (192)
T d1f0ya2           5 KHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDILAKSK   44 (192)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             EEEEEECcCHHHHHHHHHHHhCCCcEEEEECChHHHHHHH
Confidence            5899999999999999999999999999999987655443

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=93.92  E-value=0.03  Score=45.85  Aligned_cols=35  Identities=23%  Similarity=0.225  Sum_probs=31.1

Q ss_pred             CCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCc
Q 018382          180 SGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSD  214 (357)
Q Consensus       180 ~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~  214 (357)
                      ..++|+|+|+|+.|++++..+...|.+|+++.+++
T Consensus         3 ~~~kV~IiGaG~aGl~~A~~L~~~G~~v~v~Er~~   37 (265)
T d2voua1           3 TTDRIAVVGGSISGLTAALMLRDAGVDVDVYERSP   37 (265)
T ss_dssp             CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            35789999999999999999999999999998653

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=93.89  E-value=0.32  Score=36.05  Aligned_cols=93  Identities=19%  Similarity=0.131  Sum_probs=60.1

Q ss_pred             CeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHH-HHHh--cCCcEEE-cCCChhHHHHhh-CCccEEEEcCCCCC
Q 018382          182 LRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVE-AMEH--LGADQYL-VSSDATRMQEAA-DSLDYIIDTVPANH  256 (357)
Q Consensus       182 ~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~-~~~~--~g~~~vv-~~~~~~~~~~~~-~~~d~v~d~~g~~~  256 (357)
                      +.++|.|.|.+|..+++.+...|.+|+++...+++... +.+.  .|...+. |..+++.+++.. ..+|.++-+++...
T Consensus         4 nHiII~G~g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~~~vi~Gd~~d~~~L~~a~i~~a~~vi~~~~~d~   83 (153)
T d1id1a_           4 DHFIVCGHSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSDNDA   83 (153)
T ss_dssp             SCEEEECCSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECSSCHH
T ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhcCCcEEEEccCcchHHHHHhccccCCEEEEccccHH
Confidence            56899999999999999999999999999887765332 2221  3444332 344566666554 47999998887642


Q ss_pred             C---hHHHHhccccCCeEEEE
Q 018382          257 P---LEPYLSLLKLDGKLILT  274 (357)
Q Consensus       257 ~---~~~~~~~l~~~G~~v~~  274 (357)
                      .   .-...+.+.+.-+++..
T Consensus        84 ~n~~~~~~~r~~~~~~~iia~  104 (153)
T d1id1a_          84 DNAFVVLSAKDMSSDVKTVLA  104 (153)
T ss_dssp             HHHHHHHHHHHHTSSSCEEEE
T ss_pred             HHHHHHHHHHHhCCCCceEEE
Confidence            1   11233344555555543

>d1uira_ c.66.1.17 (A:) Spermidine synthase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thermus thermophilus [TaxId: 274]

Probab=93.88  E-value=0.093  Score=44.47  Aligned_cols=95  Identities=14%  Similarity=0.114  Sum_probs=62.0

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcC----------CcEEEcCCChhHHHHhhCCccE
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLG----------ADQYLVSSDATRMQEAADSLDY  247 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g----------~~~vv~~~~~~~~~~~~~~~d~  247 (357)
                      ...++|||+|+|. |..+-.+++.... +|.++.-.++-.+.+++.+.          ..+++..+...++++..+.+|+
T Consensus        76 ~~pk~VLiiG~G~-G~~~~~ll~~~~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~d~rv~i~~~Da~~~l~~~~~~yDv  154 (312)
T d1uira_          76 PEPKRVLIVGGGE-GATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDV  154 (312)
T ss_dssp             SCCCEEEEEECTT-SHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEE
T ss_pred             CCcceEEEeCCCc-hHHHHHHHhcCCcceEEEecCCHHHHHHHHhcCcccccCccCCCceEEEEchHHHHhhhcCCcccE
Confidence            3457899998753 4555667776654 89999988877777766552          1234433334566666668999


Q ss_pred             EE-EcC---CCC---------CChHHHHhccccCCeEEEE
Q 018382          248 II-DTV---PAN---------HPLEPYLSLLKLDGKLILT  274 (357)
Q Consensus       248 v~-d~~---g~~---------~~~~~~~~~l~~~G~~v~~  274 (357)
                      || |..   +..         +.++.+.++|+++|.++.-
T Consensus       155 Ii~D~~dp~~~~~~~~~L~t~eF~~~~~~~L~p~Gvlv~~  194 (312)
T d1uira_         155 VIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQ  194 (312)
T ss_dssp             EEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEE
T ss_pred             EEEeCCCcccccchhhhhhhHHHHHHHHHhcCCCceEEEe
Confidence            96 432   211         1245688999999998864

>d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Glycine N-methyltransferase
domain: Glycine N-methyltransferase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=93.85  E-value=0.051  Score=45.61  Aligned_cols=93  Identities=19%  Similarity=0.190  Sum_probs=57.8

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc---CCc------EEEcCCChhHHHHh--hCCccE
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL---GAD------QYLVSSDATRMQEA--ADSLDY  247 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~---g~~------~vv~~~~~~~~~~~--~~~~d~  247 (357)
                      +++++||-+|+|. |..++.+++. |++|++++.+++-.+.++++.   +..      .+.+.+-...-...  ...+|.
T Consensus        55 ~~~~~vLD~GcG~-G~~~~~la~~-g~~v~gvD~S~~ml~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~  132 (292)
T d1xvaa_          55 HGCHRVLDVACGT-GVDSIMLVEE-GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPAGDGFDA  132 (292)
T ss_dssp             TTCCEEEESSCTT-SHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSCCTTCEEE
T ss_pred             cCCCEEEEecCCC-cHHHHHHHHc-CCeeeeccCchHHHHHHHHHHHhcccccccceeeeeeccccccccccCCCCCceE
Confidence            5678899888853 6677777775 899999999988776665422   211      11111111111111  247998


Q ss_pred             EEEcCCCC--------------CChHHHHhccccCCeEEE
Q 018382          248 IIDTVPAN--------------HPLEPYLSLLKLDGKLIL  273 (357)
Q Consensus       248 v~d~~g~~--------------~~~~~~~~~l~~~G~~v~  273 (357)
                      |+.....-              ..++.+.+.|+|+|.++.
T Consensus       133 v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~  172 (292)
T d1xvaa_         133 VICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVI  172 (292)
T ss_dssp             EEECSSCGGGSCCTTSSSHHHHHHHHHHHHTEEEEEEEEE
T ss_pred             EEEecCchhhcCCcccChHHHHHHHHHHHHHcCcCcEEEE
Confidence            88643221              146778899999999876

>d1u8fo1 c.2.1.3 (O:3-151,O:316-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Human(Homo sapiens), liver isoform [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Human(Homo sapiens), liver isoform [TaxId: 9606]

Probab=93.84  E-value=0.26  Score=37.43  Aligned_cols=96  Identities=13%  Similarity=0.207  Sum_probs=61.9

Q ss_pred             eEEEEecChHHHHHHHHHHHc-CCeEEEEeC---CcHHHHHHHHhcC-------C------cE---------EEcCCChh
Q 018382          183 RGGILGLGGVGHMGVLIAKAM-GHHVTVISS---SDKKRVEAMEHLG-------A------DQ---------YLVSSDAT  236 (357)
Q Consensus       183 ~VlI~G~g~~G~~ai~la~~~-g~~V~~~~~---~~~~~~~~~~~~g-------~------~~---------vv~~~~~~  236 (357)
                      +|.|.|-|-+|.++.+.+... ..+++++-.   +.+....+.+ +-       .      +.         +.+.++++
T Consensus         3 kIgINGFGRIGR~v~R~~~~~~~~~ivaINd~~~~~~~~ayLlk-yDS~hG~~~~~v~~~~~~l~i~~~~I~~~~~~~p~   81 (169)
T d1u8fo1           3 KVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQ-YDSTHGKFHGTVKAENGKLVINGNPITIFQERDPS   81 (169)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHCSSEEEEEECSSSCHHHHHHHHH-CCTTTCSCSSCEEEETTEEEETTEEEEEECCSSGG
T ss_pred             EEEEECCcHHHHHHHHHHHHCCCcEEEEecCCCccHHHHHHHHh-hccccCCcCCeEEEECCEEEECCEEEEEEECCChh
Confidence            578999999999999877655 467777744   2234555555 32       1      11         11222233


Q ss_pred             HHHHhhCCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCC
Q 018382          237 RMQEAADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINT  279 (357)
Q Consensus       237 ~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~  279 (357)
                      .+.+...++|+|+||+|.......+...+..+-+-|.+..+..
T Consensus        82 ~i~W~~~~vDiViEcTG~f~~~~~~~~hl~~gakkViiSaP~~  124 (169)
T d1u8fo1          82 KIKWGDAGAEYVVESTGVFTTMEKAGAHLQGGAKRVIISAPSA  124 (169)
T ss_dssp             GCCTTTTTCCEEEECSSSCCSHHHHGGGGGGTCSEEEESSCCS
T ss_pred             hCCccccCCCEEEEecceeccHHHHHHHHhcCCceEeeccccc
Confidence            3333334899999999998567777778888877777765543

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=93.84  E-value=0.028  Score=46.83  Aligned_cols=33  Identities=27%  Similarity=0.345  Sum_probs=30.2

Q ss_pred             CCeEEEEecChHHHHHHHHHHHcCCeEEEEeCC
Q 018382          181 GLRGGILGLGGVGHMGVLIAKAMGHHVTVISSS  213 (357)
Q Consensus       181 ~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~  213 (357)
                      +++|+|+|+|..|++++..++..|.+|+++..+
T Consensus         1 ~KkV~IIGaG~aGL~aA~~La~~G~~V~vlE~~   33 (373)
T d1seza1           1 AKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAE   33 (373)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSS
T ss_pred             CCEEEEECcCHHHHHHHHHHHhCCCCEEEEeCC
Confidence            578999999999999999999999999999865

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=93.78  E-value=0.05  Score=42.75  Aligned_cols=94  Identities=21%  Similarity=0.226  Sum_probs=58.4

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHH---hcCCcEE-EcCCChhHHHHhhCCccEEEEcC--
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAME---HLGADQY-LVSSDATRMQEAADSLDYIIDTV--  252 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~---~~g~~~v-v~~~~~~~~~~~~~~~d~v~d~~--  252 (357)
                      ++| +||-+|+| .|..+..+++ .|.+|++++.++...+.+++   ..|.+.+ +...+.... ...+.||+|+...  
T Consensus        30 ~~g-rvLDiGcG-~G~~~~~la~-~g~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d~~~~-~~~~~fD~I~~~~~~  105 (198)
T d2i6ga1          30 APG-RTLDLGCG-NGRNSLYLAA-NGYDVTAWDKNPASMANLERIKAAEGLDNLQTDLVDLNTL-TFDGEYDFILSTVVM  105 (198)
T ss_dssp             CSC-EEEEETCT-TSHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHHTTCTTEEEEECCTTTC-CCCCCEEEEEEESCG
T ss_pred             CCC-cEEEECCC-CCHHHHHHHH-HhhhhccccCcHHHHHHHHHHhhhccccchhhhheecccc-cccccccEEEEeeee
Confidence            454 89999986 6777777776 48999999999887665543   2343321 111111100 1234799998532  


Q ss_pred             ---CCC---CChHHHHhccccCCeEEEEcc
Q 018382          253 ---PAN---HPLEPYLSLLKLDGKLILTGV  276 (357)
Q Consensus       253 ---g~~---~~~~~~~~~l~~~G~~v~~g~  276 (357)
                         ...   ..++.+.++|+++|.++....
T Consensus       106 ~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~  135 (198)
T d2i6ga1         106 MFLEAQTIPGLIANMQRCTKPGGYNLIVAA  135 (198)
T ss_dssp             GGSCTTHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred             ecCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence               111   145567788999999887643

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=93.65  E-value=0.05  Score=38.89  Aligned_cols=36  Identities=17%  Similarity=0.281  Sum_probs=32.0

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCc
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSD  214 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~  214 (357)
                      +..++|+|+|+|.+|+=+++.++.+|.+|+++.+.+
T Consensus        20 ~~p~~v~IiGgG~iG~E~A~~l~~~g~~Vtlv~~~~   55 (117)
T d1onfa2          20 KESKKIGIVGSGYIAVELINVIKRLGIDSYIFARGN   55 (117)
T ss_dssp             CCCSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSS
T ss_pred             CCCCEEEEECCchHHHHHHHHHHhccccceeeehhc
Confidence            345789999999999999999999999999999763

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=93.63  E-value=0.063  Score=38.61  Aligned_cols=36  Identities=25%  Similarity=0.301  Sum_probs=32.8

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCc
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSD  214 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~  214 (357)
                      +++++++|+|+|.+|.=++..++..|.+|+++.+++
T Consensus        28 ~~~~~vvIIGgG~iG~E~A~~l~~~g~~Vtli~~~~   63 (121)
T d1d7ya2          28 RPQSRLLIVGGGVIGLELAATARTAGVHVSLVETQP   63 (121)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             hcCCeEEEECcchhHHHHHHHhhcccceEEEEeecc
Confidence            567999999999999999999999999999998764

>d1mjfa_ c.66.1.17 (A:) Putative spermidine synthetase PF0127 (SpeE) {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Putative spermidine synthetase PF0127 (SpeE)
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=93.63  E-value=0.12  Score=42.94  Aligned_cols=95  Identities=12%  Similarity=0.102  Sum_probs=58.6

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCC---------------cEEEcCCChhHHHHhhC
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGA---------------DQYLVSSDATRMQEAAD  243 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~---------------~~vv~~~~~~~~~~~~~  243 (357)
                      ...++|||+|+|. |..+-.+++.-..+|.++.-.++-.+.+++.++.               -+++..+...++++ .+
T Consensus        71 ~~p~~vLiiG~G~-G~~~~~~l~~~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~~~~~~d~rv~i~~~Da~~~l~~-~~  148 (276)
T d1mjfa_          71 PKPKRVLVIGGGD-GGTVREVLQHDVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-NR  148 (276)
T ss_dssp             SCCCEEEEEECTT-SHHHHHHTTSCCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-CC
T ss_pred             CCCceEEEecCCc-hHHHHHHHHhCCceEEEecCCHHHHHHHHHhhhhccchhhhhhccCCCCceEEEChHHHHHhc-cC
Confidence            4558999998753 2333444554444888888877766666664432               13443333345543 46


Q ss_pred             CccEEE-EcCCCC---------CChHHHHhccccCCeEEEEc
Q 018382          244 SLDYII-DTVPAN---------HPLEPYLSLLKLDGKLILTG  275 (357)
Q Consensus       244 ~~d~v~-d~~g~~---------~~~~~~~~~l~~~G~~v~~g  275 (357)
                      .+|+|+ |.....         +.++.+.++|+++|.++.-.
T Consensus       149 ~yDvIi~D~~~~~~~~~~L~t~eF~~~~~~~L~~~Gv~v~q~  190 (276)
T d1mjfa_         149 GFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQA  190 (276)
T ss_dssp             CEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEE
T ss_pred             CCCEEEEeCCCCCCCcccccCHHHHHhhHhhcCCCceEEEec
Confidence            899996 433221         23667888999999988654

>d2b2ca1 c.66.1.17 (A:3-314) Spermidine synthase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=93.62  E-value=0.1  Score=44.09  Aligned_cols=96  Identities=21%  Similarity=0.140  Sum_probs=61.4

Q ss_pred             CCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCC---------cEEEcCCChhHHHHhhCCccEEE
Q 018382          180 SGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGA---------DQYLVSSDATRMQEAADSLDYII  249 (357)
Q Consensus       180 ~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~---------~~vv~~~~~~~~~~~~~~~d~v~  249 (357)
                      .-++|||+|+|. |..+-.+++..+. +|.++.-.++-.+.+++.+..         ..++..+...++++..+.+|+|+
T Consensus       106 ~pk~VLIiGgG~-G~~~rellk~~~v~~v~~VEID~~Vv~~a~~~~~~~~~~~~dprv~i~i~Da~~~l~~~~~~yDvII  184 (312)
T d2b2ca1         106 DPKRVLIIGGGD-GGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVII  184 (312)
T ss_dssp             SCCEEEEESCTT-SHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEE
T ss_pred             CCCeEEEeCCCc-hHHHHHHHHcCCcceEEEEcccHHHHHHHHhhchhhccccCCCCeEEEEchHHHHHHhCCCCCCEEE
Confidence            457899998654 3345567776665 899988887777777775542         12333333456666566899997


Q ss_pred             EcCCC----------CCChHHHHhccccCCeEEEEcc
Q 018382          250 DTVPA----------NHPLEPYLSLLKLDGKLILTGV  276 (357)
Q Consensus       250 d~~g~----------~~~~~~~~~~l~~~G~~v~~g~  276 (357)
                      --...          .+.++.+.++|+++|.++.-..
T Consensus       185 ~D~~dp~~~~~~L~t~eFy~~~~~~L~~~Gi~v~q~~  221 (312)
T d2b2ca1         185 TDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQGE  221 (312)
T ss_dssp             ECCC-------------HHHHHHHHEEEEEEEEEECC
T ss_pred             EcCCCCCCcchhhhhHHHHHHHHhhcCCCcEEEEecC
Confidence            32211          1245677889999999987643

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=93.54  E-value=0.068  Score=45.72  Aligned_cols=37  Identities=11%  Similarity=-0.161  Sum_probs=30.2

Q ss_pred             CCeEEEEec---ChHHHHHHHHHHHcCCeEEEEeCCcHHH
Q 018382          181 GLRGGILGL---GGVGHMGVLIAKAMGHHVTVISSSDKKR  217 (357)
Q Consensus       181 ~~~VlI~G~---g~~G~~ai~la~~~g~~V~~~~~~~~~~  217 (357)
                      ++..||+|+   .++|++.++.+...|++|+++.+++...
T Consensus         2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~   41 (329)
T d1uh5a_           2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYN   41 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHH
T ss_pred             CcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhh
Confidence            466788884   3899999999999999999988776543

>d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0312
species: Thermotoga maritima [TaxId: 2336]

Probab=93.50  E-value=0.59  Score=35.66  Aligned_cols=132  Identities=15%  Similarity=0.074  Sum_probs=76.2

Q ss_pred             eEEEEecChHHHH-HHHHHHHcC--CeEEEE-eCCcHHHHHHHHhcCCcEEEcCCChhHHHHhh-CCccEEEEcCCCCCC
Q 018382          183 RGGILGLGGVGHM-GVLIAKAMG--HHVTVI-SSSDKKRVEAMEHLGADQYLVSSDATRMQEAA-DSLDYIIDTVPANHP  257 (357)
Q Consensus       183 ~VlI~G~g~~G~~-ai~la~~~g--~~V~~~-~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~-~~~d~v~d~~g~~~~  257 (357)
                      +|.|+|+|.+|.- .+..++..+  .+++.+ ++++++.+.+.++++...+++  +.+  +-+. ..+|+|+-++.....
T Consensus         5 rigiIG~G~~g~~~h~~~l~~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~~~~--~~~--ell~~~~id~v~I~tp~~~h   80 (181)
T d1zh8a1           5 RLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVFD--SYE--ELLESGLVDAVDLTLPVELN   80 (181)
T ss_dssp             EEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEES--CHH--HHHHSSCCSEEEECCCGGGH
T ss_pred             EEEEEcCCHHHHHHHHHHHHhCCCCeEEEEEEeccHhhhhhhhccccccceee--eee--ccccccccceeecccccccc
Confidence            5789999999964 466666543  367755 455666666666688766543  211  1223 369999988887645


Q ss_pred             hHHHHhccccCCeEEEEccCCCCcccc---hHHHh-hccceEEEEeecC----HHHHHHHHHHHHhcCCC
Q 018382          258 LEPYLSLLKLDGKLILTGVINTPMQFL---TPMVM-LGRKAITGSFIGS----MKETKEMLEFCREKGVT  319 (357)
Q Consensus       258 ~~~~~~~l~~~G~~v~~g~~~~~~~~~---~~~~~-~~~~~i~g~~~~~----~~~~~~~~~~~~~~~l~  319 (357)
                      .+.+..++.. |+=|.+.-+.....-.   +..+. .++..+.-.+..+    ...+..+.+++.+|.+-
T Consensus        81 ~~~~~~al~~-gk~V~~EKPl~~~~~e~~~l~~~~~~~~~~~~v~~~~R~~~~~~~~~~~~~~i~~G~ig  149 (181)
T d1zh8a1          81 LPFIEKALRK-GVHVICEKPISTDVETGKKVVELSEKSEKTVYIAENFRENSYQKEFEDFYQVVAEGKPN  149 (181)
T ss_dssp             HHHHHHHHHT-TCEEEEESSSSSSHHHHHHHHHHHHHCSSCEEEECGGGCCHHHHHHHHHHHHHHSCCCC
T ss_pred             cccccccccc-chhhhcCCCCcCCHHHHHHHHHHHHHhCCeEEEEeeccccccCHHHHHHHHHHHCCCCc
Confidence            5566666665 4555565443221111   22222 2233333222221    24577888888888764

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=93.46  E-value=0.024  Score=44.57  Aligned_cols=83  Identities=14%  Similarity=0.180  Sum_probs=57.2

Q ss_pred             CeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCc------EEEcCC--ChhHHHHhhCCccEEEEcCC
Q 018382          182 LRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGAD------QYLVSS--DATRMQEAADSLDYIIDTVP  253 (357)
Q Consensus       182 ~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~------~vv~~~--~~~~~~~~~~~~d~v~d~~g  253 (357)
                      .+|.|+|+|..|.+++.++...|-+|++..++++..+.+.+ -+.+      ..++.+  -...+++...+.|++|-++.
T Consensus         8 ~KI~ViGaG~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~-~~~n~~yl~~~~l~~~i~~t~~l~~a~~~ad~iiiavP   86 (189)
T d1n1ea2           8 NKAVVFGSGAFGTALAMVLSKKCREVCVWHMNEEEVRLVNE-KRENVLFLKGVQLASNITFTSDVEKAYNGAEIILFVIP   86 (189)
T ss_dssp             EEEEEECCSHHHHHHHHHHHTTEEEEEEECSCHHHHHHHHH-HTBCTTTSTTCBCCTTEEEESCHHHHHTTCSCEEECSC
T ss_pred             ceEEEECCCHHHHHHHHHHHHcCCeEEEEEecHHHHHHHhh-cccccccccccccccccccchhhhhccCCCCEEEEcCc
Confidence            36999999999999999988888899999998888777765 2211      001000  01224555567899999998


Q ss_pred             CCCChHHHHhccc
Q 018382          254 ANHPLEPYLSLLK  266 (357)
Q Consensus       254 ~~~~~~~~~~~l~  266 (357)
                      .. .++..++.++
T Consensus        87 s~-~~~~~~~~~~   98 (189)
T d1n1ea2          87 TQ-FLRGFFEKSG   98 (189)
T ss_dssp             HH-HHHHHHHHHC
T ss_pred             HH-HHHHHHHHHH
Confidence            76 6666665543

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=93.44  E-value=0.058  Score=41.76  Aligned_cols=42  Identities=26%  Similarity=0.369  Sum_probs=35.9

Q ss_pred             eEEEE-ecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc
Q 018382          183 RGGIL-GLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL  224 (357)
Q Consensus       183 ~VlI~-G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~  224 (357)
                      +|.|+ |+|.+|.++++.+...|.+|++..|++++.+.+.++.
T Consensus         2 ki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i   44 (212)
T d1jaya_           2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEY   44 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHH
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence            57888 5699999999999999999999999998877665544

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=93.39  E-value=0.069  Score=38.47  Aligned_cols=36  Identities=25%  Similarity=0.201  Sum_probs=32.4

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCc
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSD  214 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~  214 (357)
                      .++++|+|+|+|.+|+-+++.+...|.+|+++.+.+
T Consensus        28 ~~~k~vvViGgG~iG~E~A~~l~~~g~~Vtlie~~~   63 (123)
T d1nhpa2          28 PEVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILD   63 (123)
T ss_dssp             TTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             cCCCEEEEECChHHHHHHHHHhhccceEEEEEEecC
Confidence            567899999999999999999999999999998763

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=93.39  E-value=0.032  Score=41.94  Aligned_cols=82  Identities=15%  Similarity=0.123  Sum_probs=52.7

Q ss_pred             EEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCCChHHHHhcc
Q 018382          186 ILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPYLSLL  265 (357)
Q Consensus       186 I~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l  265 (357)
                      ++|+|.+|.+++..++..+..+.+..|+.++.+.+.+.++.. ..+.      .+.....|+||-|+... .+...++.+
T Consensus         4 fIG~G~mg~~l~~~L~~~~~~~~v~~R~~~~~~~l~~~~~~~-~~~~------~~~~~~~DiVil~v~d~-~i~~v~~~l   75 (153)
T d2i76a2           4 FVGTGTLTRFFLECLKDRYEIGYILSRSIDRARNLAEVYGGK-AATL------EKHPELNGVVFVIVPDR-YIKTVANHL   75 (153)
T ss_dssp             EESCCHHHHHHHHTTC----CCCEECSSHHHHHHHHHHTCCC-CCSS------CCCCC---CEEECSCTT-THHHHHTTT
T ss_pred             EEeCcHHHHHHHHHHHhCCCEEEEEeCChhhhcchhhccccc-ccch------hhhhccCcEEEEeccch-hhhHHHhhh
Confidence            569999999988877653334457789999998888855543 1111      12345689999999887 777777888


Q ss_pred             ccCCe-EEEEc
Q 018382          266 KLDGK-LILTG  275 (357)
Q Consensus       266 ~~~G~-~v~~g  275 (357)
                      +..++ ++.+.
T Consensus        76 ~~~~~ivi~~s   86 (153)
T d2i76a2          76 NLGDAVLVHCS   86 (153)
T ss_dssp             CCSSCCEEECC
T ss_pred             cccceeeeecc
Confidence            75554 45553

>d1xj5a_ c.66.1.17 (A:) Spermidine synthase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=93.35  E-value=0.086  Score=44.18  Aligned_cols=95  Identities=13%  Similarity=0.146  Sum_probs=61.3

Q ss_pred             CCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcC---------CcEEEcCCChhHHHHhhC-CccEE
Q 018382          180 SGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLG---------ADQYLVSSDATRMQEAAD-SLDYI  248 (357)
Q Consensus       180 ~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g---------~~~vv~~~~~~~~~~~~~-~~d~v  248 (357)
                      .-++|||+|+|. |..+-.+++..+. +|.++.-.++-.+.+++.++         ...++..+...++++..+ .+|+|
T Consensus        80 ~pk~VLiiGgG~-G~~~r~~l~~~~~~~i~~VEiD~~Vi~~~~~~f~~~~~~~~~~r~~i~~~Da~~~l~~~~~~~yDvI  158 (290)
T d1xj5a_          80 NPKKVLVIGGGD-GGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAV  158 (290)
T ss_dssp             CCCEEEEETCSS-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEE
T ss_pred             CCcceEEecCCc-hHHHHHHHhcccceeeEEecCCHHHHHHHHHhchhhhccccCCCcEEEEccHHHHHhhccccCccEE
Confidence            347899997643 3445577777676 78888888777777766442         122333333455665544 79988


Q ss_pred             E-EcCCC---------CCChHHHHhccccCCeEEEEc
Q 018382          249 I-DTVPA---------NHPLEPYLSLLKLDGKLILTG  275 (357)
Q Consensus       249 ~-d~~g~---------~~~~~~~~~~l~~~G~~v~~g  275 (357)
                      | |....         .+.++.+.++|+++|.++.-.
T Consensus       159 i~D~~dp~~~~~~L~t~eF~~~~~~~L~~~Gi~v~q~  195 (290)
T d1xj5a_         159 IVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQA  195 (290)
T ss_dssp             EECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEEC
T ss_pred             EEcCCCCCCcchhhCCHHHHHHHHHhcCCCcEEEEec
Confidence            6 43322         124667888999999998754

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=93.34  E-value=0.056  Score=38.53  Aligned_cols=34  Identities=18%  Similarity=0.198  Sum_probs=31.0

Q ss_pred             CCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCc
Q 018382          181 GLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSD  214 (357)
Q Consensus       181 ~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~  214 (357)
                      .++++|+|+|.+|+-+++.++.+|.+|+++.+.+
T Consensus        21 p~~vvIiGgG~ig~E~A~~l~~~G~~Vtlve~~~   54 (116)
T d1gesa2          21 PERVAVVGAGYIGVELGGVINGLGAKTHLFEMFD   54 (116)
T ss_dssp             CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCEEEEECCChhhHHHHHHhhccccEEEEEeecc
Confidence            4689999999999999999999999999998764

>d1obfo1 c.2.1.3 (O:1-152,O:315-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Achromobacter xylosoxidans [TaxId: 85698]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Achromobacter xylosoxidans [TaxId: 85698]

Probab=93.33  E-value=0.18  Score=38.60  Aligned_cols=95  Identities=13%  Similarity=0.097  Sum_probs=59.9

Q ss_pred             eEEEEecChHHHHHHHHHHHc----CCeEEEEeC--CcHHHHHHHHhcC-------Cc---------------EEEcCCC
Q 018382          183 RGGILGLGGVGHMGVLIAKAM----GHHVTVISS--SDKKRVEAMEHLG-------AD---------------QYLVSSD  234 (357)
Q Consensus       183 ~VlI~G~g~~G~~ai~la~~~----g~~V~~~~~--~~~~~~~~~~~~g-------~~---------------~vv~~~~  234 (357)
                      +|.|.|-|-+|.++.+.+-..    ..+|+++-.  +.+....+.+ +-       ..               .++..++
T Consensus         3 kigINGfGRIGR~v~R~~~~~~~~~~~~vvaINd~~~~~~~ayLlk-yDS~hG~~~~~v~~~~~~l~i~g~~i~i~~~~~   81 (173)
T d1obfo1           3 RVAINGYGRIGRNILRAHYEGGKSHDIEIVAINDLGDPKTNAHLTR-YDTAHGKFPGTVSVNGSYMVVNGDKIRVDANRN   81 (173)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTSCSSEEEEEEECSSCHHHHHHHHH-EETTTEECSSCEEEETTEEEETTEEEEEECCSC
T ss_pred             EEEEECCcHHHHHHHHHHHhCCCCCCeEEEEEcCCCChHHHHHhhc-ccccCCCcCceEEeccceEEECCEEEEEEecCC
Confidence            578889999999998877543    235665553  2223344443 21       11               1122233


Q ss_pred             hhHHHHhhCCccEEEEcCCCCCChHHHHhccccCCeEEEEccCC
Q 018382          235 ATRMQEAADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVIN  278 (357)
Q Consensus       235 ~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~  278 (357)
                      ++.+.+...++|+|+||+|.......+...|..+-+-|.+..+.
T Consensus        82 p~~i~W~~~gvDiViEcTG~f~~~~~a~~hl~~GakkViiSAP~  125 (173)
T d1obfo1          82 PAQLPWGALKVDVVLECTGFFTTKEKAGAHIKGGAKKVIISAPG  125 (173)
T ss_dssp             GGGSCTTTTTCSEEEECSSSCCSHHHHHHHHHHTCSEEEESSCC
T ss_pred             HHHCcccccccceEEEecccccCHHHHHHHhccCCcceEEecCC
Confidence            34344444489999999999756778888899887777776553

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=93.29  E-value=0.1  Score=43.18  Aligned_cols=75  Identities=20%  Similarity=0.204  Sum_probs=49.8

Q ss_pred             CCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHH------HHHHHH--hcCCcEEE-cCCChhHHHHhhCCccEEEE
Q 018382          181 GLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKK------RVEAME--HLGADQYL-VSSDATRMQEAADSLDYIID  250 (357)
Q Consensus       181 ~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~------~~~~~~--~~g~~~vv-~~~~~~~~~~~~~~~d~v~d  250 (357)
                      -++|||+|+ |.+|..++..+...|.+|++++++...      ......  ..+.+.+. |..+.........+.+.++.
T Consensus         3 kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~vi~   82 (307)
T d1qyca_           3 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVIS   82 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhhhhceeeee
Confidence            367999997 999999999998889999999976542      111111  12333321 33444444555567888888


Q ss_pred             cCCCC
Q 018382          251 TVPAN  255 (357)
Q Consensus       251 ~~g~~  255 (357)
                      +.+..
T Consensus        83 ~~~~~   87 (307)
T d1qyca_          83 TVGSL   87 (307)
T ss_dssp             CCCGG
T ss_pred             ccccc
Confidence            77664

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=93.28  E-value=0.29  Score=36.26  Aligned_cols=73  Identities=19%  Similarity=0.258  Sum_probs=47.0

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCC--eEEEEeCCcHHHHHHHHhcC-------CcEEEcCCChhHHHHhhCCccEEE
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGH--HVTVISSSDKKRVEAMEHLG-------ADQYLVSSDATRMQEAADSLDYII  249 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~--~V~~~~~~~~~~~~~~~~~g-------~~~vv~~~~~~~~~~~~~~~d~v~  249 (357)
                      ..+.+|.|+|+|.+|...+..+...+.  +++.++..+++.+-....+.       ....+-..+.    +...+.|+|+
T Consensus         4 ~~~~KI~IiGaG~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~----~~l~daDvvv   79 (148)
T d1ldna1           4 NGGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDY----DDCRDADLVV   79 (148)
T ss_dssp             TTSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCG----GGTTTCSEEE
T ss_pred             CCCCeEEEECcCHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCH----HHhccceeEE
Confidence            456789999999999998888877775  78888888776332211121       1111211221    2344799999


Q ss_pred             EcCCCC
Q 018382          250 DTVPAN  255 (357)
Q Consensus       250 d~~g~~  255 (357)
                      .++|..
T Consensus        80 itag~~   85 (148)
T d1ldna1          80 ICAGAN   85 (148)
T ss_dssp             ECCSCC
T ss_pred             Eecccc
Confidence            988775

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=93.25  E-value=0.041  Score=44.57  Aligned_cols=36  Identities=25%  Similarity=0.291  Sum_probs=31.2

Q ss_pred             CCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHH
Q 018382          181 GLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKK  216 (357)
Q Consensus       181 ~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~  216 (357)
                      ++++||+|+ +++|.+.++.+...|++|++++++++.
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~   37 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRREG   37 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCccc
Confidence            367899987 999999999999999999999987653

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=93.22  E-value=0.3  Score=32.69  Aligned_cols=67  Identities=19%  Similarity=0.251  Sum_probs=45.2

Q ss_pred             eEEEEecChHHHH-HHHHHHHcCCeEEEEeCCcHH-HHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCC
Q 018382          183 RGGILGLGGVGHM-GVLIAKAMGHHVTVISSSDKK-RVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPAN  255 (357)
Q Consensus       183 ~VlI~G~g~~G~~-ai~la~~~g~~V~~~~~~~~~-~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~  255 (357)
                      +|-++|-|++|+. ++++++..|+.|...+..+.. .+.+++ .|...... ++++.+    .+.|.|+-+.+-+
T Consensus         3 ~ihfiGIgG~GMs~LA~~L~~~G~~VsGSD~~~~~~t~~L~~-~Gi~i~~g-h~~~~i----~~~d~vV~SsAI~   71 (89)
T d1j6ua1           3 KIHFVGIGGIGMSAVALHEFSNGNDVYGSNIEETERTAYLRK-LGIPIFVP-HSADNW----YDPDLVIKTPAVR   71 (89)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHH-TTCCEESS-CCTTSC----CCCSEEEECTTCC
T ss_pred             EEEEEeECHHHHHHHHHHHHhCCCeEEEEeCCCChhHHHHHH-CCCeEEee-eccccc----CCCCEEEEecCcC
Confidence            5677788888875 468889999999999988754 444544 89764433 333221    3578887655543

>d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Virulence factor MviM
species: Escherichia coli [TaxId: 562]

Probab=93.22  E-value=0.28  Score=36.91  Aligned_cols=132  Identities=13%  Similarity=0.100  Sum_probs=75.1

Q ss_pred             eEEEEecChHHHH-HHHHHHHc-CCeEEEEe-CCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCCChH
Q 018382          183 RGGILGLGGVGHM-GVLIAKAM-GHHVTVIS-SSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLE  259 (357)
Q Consensus       183 ~VlI~G~g~~G~~-ai~la~~~-g~~V~~~~-~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~~~  259 (357)
                      +|.|+|+|.+|.- .+..++.. +.++++++ +++++...+.+.++... +  +.   .+.+...+|+|+.++.......
T Consensus         3 ri~iIG~G~~g~~~~~~~l~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~-~--~~---~~~l~~~~D~V~I~tp~~~h~~   76 (164)
T d1tlta1           3 RIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESWRIPY-A--DS---LSSLAASCDAVFVHSSTASHFD   76 (164)
T ss_dssp             EEEEECCSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHHTCCB-C--SS---HHHHHTTCSEEEECSCTTHHHH
T ss_pred             EEEEEcCCHHHHHHHHHHHHhCCCcEEEEEEechhHhhhhhhhcccccc-c--cc---chhhhhhcccccccccchhccc
Confidence            5789999999864 56666654 66777655 55666666666688642 2  22   2333457999999888774566


Q ss_pred             HHHhccccCCeEEEEccCCCCcccc---hHHH-hhccceEEEEeecCH--HHHHHHHHHHHhcCCCcc
Q 018382          260 PYLSLLKLDGKLILTGVINTPMQFL---TPMV-MLGRKAITGSFIGSM--KETKEMLEFCREKGVTSM  321 (357)
Q Consensus       260 ~~~~~l~~~G~~v~~g~~~~~~~~~---~~~~-~~~~~~i~g~~~~~~--~~~~~~~~~~~~~~l~~~  321 (357)
                      .+..++..+ +=|.+.-+.....-.   +... -.++..+.-.+..+.  ..++.+.+++.++.+-..
T Consensus        77 ~~~~al~~g-k~V~~EKPla~~~~e~~~l~~~a~~~~~~~~v~~~~r~~~~~~~~~~~~i~~g~ig~~  143 (164)
T d1tlta1          77 VVSTLLNAG-VHVCVDKPLAENLRDAERLVELAARKKLTLMVGFNRRFFVGCARHFIECVQNQTVPQT  143 (164)
T ss_dssp             HHHHHHHTT-CEEEEESSSCSSHHHHHHHHHHHHHTTCCEEEECGGGGHHHHHHHHHHHHHHTCCCTT
T ss_pred             ccccccccc-ceeeccccccCCHHHHHHHHHHHHHcCCcEEEEeccccCHHHHHHHHHHHHCCCCCCE
Confidence            666667665 445554433221111   1122 223333333333222  233567778888877654

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.22  E-value=0.12  Score=44.18  Aligned_cols=74  Identities=12%  Similarity=0.022  Sum_probs=48.4

Q ss_pred             CeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCc----HHHHHHHH--hcCCc-EEEcCCChhHHHHhhC--CccEEEEc
Q 018382          182 LRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSD----KKRVEAME--HLGAD-QYLVSSDATRMQEAAD--SLDYIIDT  251 (357)
Q Consensus       182 ~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~----~~~~~~~~--~~g~~-~vv~~~~~~~~~~~~~--~~d~v~d~  251 (357)
                      +.|||+|+ |-+|..++..+...|.+|+++++..    +.......  .-+.. ...|..+.+.++.+..  ++|+||.+
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vihl   81 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVIHF   81 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEEEC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhccCCCEEEEc
Confidence            56899987 9999999999988899999986321    11111111  11222 2345566666655433  89999998


Q ss_pred             CCCC
Q 018382          252 VPAN  255 (357)
Q Consensus       252 ~g~~  255 (357)
                      ++..
T Consensus        82 Aa~~   85 (347)
T d1z45a2          82 AGLK   85 (347)
T ss_dssp             CSCC
T ss_pred             cccc
Confidence            8754

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.19  E-value=0.06  Score=38.78  Aligned_cols=34  Identities=26%  Similarity=0.227  Sum_probs=31.0

Q ss_pred             CCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCc
Q 018382          181 GLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSD  214 (357)
Q Consensus       181 ~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~  214 (357)
                      -++++|+|+|.+|+=+++.+..+|.+|+++.+.+
T Consensus        23 p~~~vIiG~G~ig~E~A~~l~~lG~~Vtii~~~~   56 (122)
T d1v59a2          23 PKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQP   56 (122)
T ss_dssp             CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCeEEEECCCchHHHHHHHHHhhCcceeEEEecc
Confidence            3689999999999999999999999999998764

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=93.19  E-value=0.46  Score=36.11  Aligned_cols=93  Identities=19%  Similarity=0.179  Sum_probs=58.6

Q ss_pred             eEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCc----EEEcCCChhHHHHhhCCccEEEEcCCCCCCh
Q 018382          183 RGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGAD----QYLVSSDATRMQEAADSLDYIIDTVPANHPL  258 (357)
Q Consensus       183 ~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~----~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~~  258 (357)
                      +|-|+|.|.+|..++.-+...|.+|++.+++.++.+.+.+..+..    ......+.+.+.......+.++.+.......
T Consensus         3 kIGvIGlG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (178)
T d1pgja2           3 DVGVVGLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILVQAGAAT   82 (178)
T ss_dssp             SEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECCCCSHHH
T ss_pred             EEEEEeehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccccchhhhhhhhHHHHhcccceEEEEeecCcchh
Confidence            477889999999999999888999999999999998887744321    1111122222233334556666655554222


Q ss_pred             ----HHHHhccccCCeEEEEc
Q 018382          259 ----EPYLSLLKLDGKLILTG  275 (357)
Q Consensus       259 ----~~~~~~l~~~G~~v~~g  275 (357)
                          ......+.++..++..+
T Consensus        83 ~~~~~~~~~~~~~~~iii~~s  103 (178)
T d1pgja2          83 DSTIEQLKKVFEKGDILVDTG  103 (178)
T ss_dssp             HHHHHHHHHHCCTTCEEEECC
T ss_pred             hhhhhhhhhhccccceecccC
Confidence                34444566666665553

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=93.18  E-value=0.079  Score=37.89  Aligned_cols=45  Identities=24%  Similarity=0.307  Sum_probs=35.8

Q ss_pred             hhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCc
Q 018382          167 TVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSD  214 (357)
Q Consensus       167 ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~  214 (357)
                      +++.++ ...  +..++++|+|+|.+|+=+++.++.+|.+|+++.+++
T Consensus        11 ~s~~~l-~l~--~~p~~i~IiG~G~ig~E~A~~l~~~G~~Vtiv~~~~   55 (119)
T d3lada2          11 DSTGAL-DFQ--NVPGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMD   55 (119)
T ss_dssp             EHHHHT-SCS--SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             chhHhh-Ccc--cCCCeEEEECCChHHHHHHHHHHHcCCceEEEEeec
Confidence            455554 222  344889999999999999999999999999998764

>d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein HI0319 (YecO)
domain: Hypothetical protein HI0319 (YecO)
species: Haemophilus influenzae [TaxId: 727]

Probab=93.17  E-value=0.035  Score=44.63  Aligned_cols=97  Identities=12%  Similarity=0.047  Sum_probs=58.7

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHH---cCCeEEEEeCCcHHHHHHHHhc---CCcEEEcCCChhHHHHhhCCccEEEEcC
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKA---MGHHVTVISSSDKKRVEAMEHL---GADQYLVSSDATRMQEAADSLDYIIDTV  252 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~---~g~~V~~~~~~~~~~~~~~~~~---g~~~vv~~~~~~~~~~~~~~~d~v~d~~  252 (357)
                      +++.+||-+|+|. |..+..+++.   .+++|++++.+++-.+.+++++   +....+.....+....-...+|+++-+.
T Consensus        38 ~~~~~vLDlGCGt-G~~~~~l~~~~~~~~~~v~giD~S~~ml~~A~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~i~~~~  116 (225)
T d1im8a_          38 TADSNVYDLGCSR-GAATLSARRNINQPNVKIIGIDNSQPMVERCRQHIAAYHSEIPVEILCNDIRHVEIKNASMVILNF  116 (225)
T ss_dssp             CTTCEEEEESCTT-CHHHHHHHHTCCCSSCEEEEECSCHHHHHHHHHHHHTSCCSSCEEEECSCTTTCCCCSEEEEEEES
T ss_pred             CCCCEEEEeccch-hhHHHHHHHhhcCCCCceEEeCCCHHHHHHHHHHhHhhcccchhhhccchhhccccccceeeEEee
Confidence            7889999999853 5555666654   4789999999999887776643   2211111111111111123566665432


Q ss_pred             CC-----C---CChHHHHhccccCCeEEEEcc
Q 018382          253 PA-----N---HPLEPYLSLLKLDGKLILTGV  276 (357)
Q Consensus       253 g~-----~---~~~~~~~~~l~~~G~~v~~g~  276 (357)
                      .-     .   ..++.+.+.|+|+|.++....
T Consensus       117 ~l~~~~~~d~~~~l~~i~~~LkpgG~li~~~~  148 (225)
T d1im8a_         117 TLQFLPPEDRIALLTKIYEGLNPNGVLVLSEK  148 (225)
T ss_dssp             CGGGSCGGGHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             eccccChhhHHHHHHHHHHhCCCCceeecccc
Confidence            21     1   246778889999999987643

>d1inla_ c.66.1.17 (A:) Spermidine synthase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thermotoga maritima [TaxId: 2336]

Probab=93.13  E-value=0.073  Score=44.70  Aligned_cols=95  Identities=17%  Similarity=0.141  Sum_probs=59.6

Q ss_pred             CCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCC---------cEEEcCCChhHHHHhhCCccEEE
Q 018382          180 SGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGA---------DQYLVSSDATRMQEAADSLDYII  249 (357)
Q Consensus       180 ~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~---------~~vv~~~~~~~~~~~~~~~d~v~  249 (357)
                      .-++|||+|+|. |..+-.+++..+. +|+++.-.++-.+.+++.++.         -+++..+...++++..+.+|+|+
T Consensus        89 ~pk~VLiiGgG~-G~~~r~~l~~~~~~~i~~VEIDp~Vi~~a~~~~~~~~~~~~d~rv~v~~~Da~~~l~~~~~~yDvIi  167 (295)
T d1inla_          89 NPKKVLIIGGGD-GGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVII  167 (295)
T ss_dssp             SCCEEEEEECTT-CHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEE
T ss_pred             CCceEEEecCCc-hHHHHHHHhcCCCceEEEecCCHHHHHHHHHHHHhhcccccCCCcEEEhhhHHHHHhcCCCCCCEEE
Confidence            347999998743 3445567776665 799988887777766664431         13333333345555555899996


Q ss_pred             -EcCCC----------CCChHHHHhccccCCeEEEEc
Q 018382          250 -DTVPA----------NHPLEPYLSLLKLDGKLILTG  275 (357)
Q Consensus       250 -d~~g~----------~~~~~~~~~~l~~~G~~v~~g  275 (357)
                       |+...          .+.++.+.++|+++|.++.-.
T Consensus       168 ~D~~dp~~~~~~~L~t~efy~~~~~~L~~~Gi~v~q~  204 (295)
T d1inla_         168 IDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAET  204 (295)
T ss_dssp             EEC----------CCSHHHHHHHHHHEEEEEEEEEEC
T ss_pred             EcCCCCCcCchhhhccHHHHHHHHhhcCCCcEEEEec
Confidence             33211          123567888999999998754

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=93.06  E-value=0.09  Score=45.36  Aligned_cols=73  Identities=14%  Similarity=0.043  Sum_probs=44.9

Q ss_pred             CeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcH-----HHHHHHHhc---CCc-EE--EcCCChhHHHHhhC--CccE
Q 018382          182 LRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDK-----KRVEAMEHL---GAD-QY--LVSSDATRMQEAAD--SLDY  247 (357)
Q Consensus       182 ~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~-----~~~~~~~~~---g~~-~v--v~~~~~~~~~~~~~--~~d~  247 (357)
                      +.|||+|+ |-+|..++..+...|.+|+++++...     +.+.+....   ... ..  .|..+.+.++++..  .+|+
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~   81 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPDE   81 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCSE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhccCCCE
Confidence            57899987 99999999999888999999987432     222221101   111 11  23445555555544  6799


Q ss_pred             EEEcCCC
Q 018382          248 IIDTVPA  254 (357)
Q Consensus       248 v~d~~g~  254 (357)
                      |+.+++.
T Consensus        82 v~h~aa~   88 (357)
T d1db3a_          82 VYNLGAM   88 (357)
T ss_dssp             EEECCCC
T ss_pred             EEEeecc
Confidence            9998865

>d2b4ro1 c.2.1.3 (O:4-152,O:319-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=93.03  E-value=0.22  Score=37.72  Aligned_cols=95  Identities=16%  Similarity=0.155  Sum_probs=62.4

Q ss_pred             eEEEEecChHHHHHHHHHHHc-CCeEEEEeC---CcHHHHHHHHhcCC-------c---------------EEEcCCChh
Q 018382          183 RGGILGLGGVGHMGVLIAKAM-GHHVTVISS---SDKKRVEAMEHLGA-------D---------------QYLVSSDAT  236 (357)
Q Consensus       183 ~VlI~G~g~~G~~ai~la~~~-g~~V~~~~~---~~~~~~~~~~~~g~-------~---------------~vv~~~~~~  236 (357)
                      +|.|.|-|-+|.++.+.+... ..+|+++-.   +.+....+.+ +-.       +               .+...++++
T Consensus         2 kigINGfGRIGR~v~R~~~~~~~~~iv~INd~~~d~~~~ayLlk-yDS~hG~~~~~v~~~~~~l~i~~~~I~i~~~~~p~   80 (166)
T d2b4ro1           2 KLGINGFGRIGRLVFRAAFGRKDIEVVAINDPFMDLNHLCYLLK-YDSVHGQFPCEVTHADGFLLIGEKKVSVFAEKDPS   80 (166)
T ss_dssp             EEEEECCSHHHHHHHHHHHTCSSEEEEEEECTTCCHHHHHHHHH-CCTTTCSCSSCEEEETTEEEESSCEEEEECCSSGG
T ss_pred             eEEEECCCHHHHHHHHHHhhCCCcEEEEECCCCCChHHhhhhhh-cccccccceeeeccCCceEEecCcEEEEEeCCChH
Confidence            578889999999999988755 457777653   2344555555 321       1               111223344


Q ss_pred             HHHHhhCCccEEEEcCCCCCChHHHHhccccCCeEEEEccCC
Q 018382          237 RMQEAADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVIN  278 (357)
Q Consensus       237 ~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~  278 (357)
                      .+.+...++|+|+||+|.....+.+...+..+-+-|.+..+.
T Consensus        81 ~i~W~~~gvdiViEcTG~f~~~~~~~~hl~~gakkViiSAP~  122 (166)
T d2b4ro1          81 QIPWGKCQVDVVCESTGVFLTKELASSHLKGGAKKVIMSAPP  122 (166)
T ss_dssp             GCCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCC
T ss_pred             HccccccCCCEEEEecccccchhhhhhhhccCCCEEEEeccc
Confidence            444444489999999999866677888888887667665543

>d1gado1 c.2.1.3 (O:0-148,O:313-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Escherichia coli [TaxId: 562]

Probab=92.98  E-value=0.36  Score=36.47  Aligned_cols=95  Identities=13%  Similarity=0.127  Sum_probs=61.2

Q ss_pred             eEEEEecChHHHHHHHHHHHcC-CeEEEEeCCcH--HHHHHHHhc----C---Cc------E---------EEcCCChhH
Q 018382          183 RGGILGLGGVGHMGVLIAKAMG-HHVTVISSSDK--KRVEAMEHL----G---AD------Q---------YLVSSDATR  237 (357)
Q Consensus       183 ~VlI~G~g~~G~~ai~la~~~g-~~V~~~~~~~~--~~~~~~~~~----g---~~------~---------vv~~~~~~~  237 (357)
                      +|.|.|-|-+|.++.+.+.... .+|+++-...+  ....+.+ +    |   .+      .         +.+.++++.
T Consensus         3 kigINGFGRIGR~v~R~~~~~~~i~ivaINd~~~~~~~ayLl~-yDSvhG~~~~~v~~~~~~l~ing~~I~i~~~~~p~~   81 (166)
T d1gado1           3 KVGINGFGRIGRIVFRAAQKRSDIEIVAINDLLDADYMAYMLK-YDSTHGRFDGTVEVKDGHLIVNGKKIRVTAERDPAN   81 (166)
T ss_dssp             EEEEECCSHHHHHHHHHHHTCSSEEEEEEECSSCHHHHHHHHH-CCTTTCSCSSCEEEETTEEEETTEEEEEECCSSGGG
T ss_pred             EEEEECCcHHHHHHHHHHhhCCCeEEEEEeCCCCHHHHhhhhe-ecCCCCCcCCeEEEeCCEEEECCEEEEEEeCCChHH
Confidence            4778899999999999887664 47776654322  2333433 2    1   11      1         112223343


Q ss_pred             HHHhhCCccEEEEcCCCCCChHHHHhccccCCeEEEEccCC
Q 018382          238 MQEAADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVIN  278 (357)
Q Consensus       238 ~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~  278 (357)
                      +.+-..++|+|+||+|.....+.+...+..+-+-|.+..+.
T Consensus        82 i~W~~~gvDiViEcTG~f~t~~~~~~hl~~gakkViiSaP~  122 (166)
T d1gado1          82 LKWDEVGVDVVAEATGLFLTDETARKHITAGAKKVVMTGPS  122 (166)
T ss_dssp             GCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCC
T ss_pred             CCccccCCCEEEEccccccCHHHHHHHhcCCCceEEeeccc
Confidence            44434489999999999867777888888887767776544

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=92.97  E-value=0.44  Score=38.45  Aligned_cols=35  Identities=29%  Similarity=0.407  Sum_probs=31.8

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCC
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSS  213 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~  213 (357)
                      -.|.+|+|.|.|.+|..+++++...|++|++++.+
T Consensus        29 l~g~~v~IqGfGnVG~~~a~~L~~~Gakvv~vsD~   63 (242)
T d1v9la1          29 IEGKTVAIQGMGNVGRWTAYWLEKMGAKVIAVSDI   63 (242)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECS
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCeEEEeecc
Confidence            47899999999999999999999999999987754

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.92  E-value=0.15  Score=42.86  Aligned_cols=72  Identities=18%  Similarity=0.135  Sum_probs=47.2

Q ss_pred             CeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHH--HHHHHHhcCCc-----EEEcCCChhHHHHhhC--CccEEEEc
Q 018382          182 LRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKK--RVEAMEHLGAD-----QYLVSSDATRMQEAAD--SLDYIIDT  251 (357)
Q Consensus       182 ~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~--~~~~~~~~g~~-----~vv~~~~~~~~~~~~~--~~d~v~d~  251 (357)
                      ++|||+|+ |.+|..++..+...|.+|+++++....  ...+.. ++.+     ...|..+...+.....  ..++++.+
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~-~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~~   79 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRE-LGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYNL   79 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHH-TTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHH-hcccCCcEEEEccccChHHhhhhhccccccccccc
Confidence            58999987 999999999888889999999875432  233333 4421     2235555555554432  56677776


Q ss_pred             CCC
Q 018382          252 VPA  254 (357)
Q Consensus       252 ~g~  254 (357)
                      +..
T Consensus        80 a~~   82 (321)
T d1rpna_          80 AAQ   82 (321)
T ss_dssp             CSC
T ss_pred             ccc
Confidence            654

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=92.89  E-value=0.08  Score=38.06  Aligned_cols=34  Identities=21%  Similarity=0.120  Sum_probs=30.5

Q ss_pred             CCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCC
Q 018382          180 SGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSS  213 (357)
Q Consensus       180 ~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~  213 (357)
                      ..++++|+|+|.+|+=+++.++.+|.+|+++.++
T Consensus        19 ~P~~vvIIGgG~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          19 CPGKTLVVGASYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CCCeEEEECCCccHHHHHHHHhhcCCeEEEEEec
Confidence            3467999999999999999999999999999764

>d1x7da_ c.2.1.13 (A:) Ornithine cyclodeaminase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Ornithine cyclodeaminase
species: Pseudomonas putida [TaxId: 303]

Probab=92.81  E-value=0.19  Score=42.88  Aligned_cols=102  Identities=13%  Similarity=0.108  Sum_probs=67.1

Q ss_pred             hccCCCCCCCeEEEEecChHHHHHHHHH-HHcCC-eEEEEeCCcHHHHHHHHhcCC---cEEEcCCChhHHHHhhCCccE
Q 018382          173 SHFGLKQSGLRGGILGLGGVGHMGVLIA-KAMGH-HVTVISSSDKKRVEAMEHLGA---DQYLVSSDATRMQEAADSLDY  247 (357)
Q Consensus       173 ~~~~~~~~~~~VlI~G~g~~G~~ai~la-~~~g~-~V~~~~~~~~~~~~~~~~~g~---~~vv~~~~~~~~~~~~~~~d~  247 (357)
                      +.+.+ +..+++.|+|+|..+.+.++.. ...+. +|.+..++.++.+.+.+++..   -.+...   +.+++...+.|+
T Consensus       121 ~~LA~-~da~~l~iiG~G~QA~~~~~a~~~v~~i~~V~v~~r~~~~~~~~~~~l~~~~g~~v~~~---~s~~eav~~ADI  196 (340)
T d1x7da_         121 QALAR-PNARKMALIGNGAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEYSGLTIRRA---SSVAEAVKGVDI  196 (340)
T ss_dssp             HHHSC-TTCCEEEEECCSTTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTCTTCEEEEC---SSHHHHHTTCSE
T ss_pred             HHhhc-cCCceEEEEcccHHHHHHHHHHhhhcceeeeEEEecChHHHHHHHHhhhhccCCCceec---CCHHHHHhcCCc
Confidence            44444 5567889999999998877755 45677 899999998877666554432   112111   234566778999


Q ss_pred             EEEcCCCCCCh-HHHHhccccCCeEEEEccCC
Q 018382          248 IIDTVPANHPL-EPYLSLLKLDGKLILTGVIN  278 (357)
Q Consensus       248 v~d~~g~~~~~-~~~~~~l~~~G~~v~~g~~~  278 (357)
                      |+-|+.+...- -.-.+.++++-.+..+|...
T Consensus       197 i~t~Tas~s~~Pv~~~~~l~pG~hI~aiGs~~  228 (340)
T d1x7da_         197 ITTVTADKAYATIITPDMLEPGMHLNAVGGDC  228 (340)
T ss_dssp             EEECCCCSSEEEEECGGGCCTTCEEEECSCCB
T ss_pred             eeeccccCCCCcccchhhcCCCCEEeecccch
Confidence            99877654111 11235788888888887654

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.77  E-value=0.074  Score=38.42  Aligned_cols=34  Identities=24%  Similarity=0.245  Sum_probs=31.2

Q ss_pred             CCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCc
Q 018382          181 GLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSD  214 (357)
Q Consensus       181 ~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~  214 (357)
                      .++++|+|+|.+|+=++..++.+|.+|+++.+++
T Consensus        22 pk~vvIvGgG~iG~E~A~~l~~~G~~Vtlv~~~~   55 (125)
T d3grsa2          22 PGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHD   55 (125)
T ss_dssp             CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCEEEEEcCCccHHHHHHHHhcCCcEEEEEeecc
Confidence            3789999999999999999999999999999864

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=92.66  E-value=0.095  Score=38.29  Aligned_cols=36  Identities=22%  Similarity=0.209  Sum_probs=32.7

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCc
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSD  214 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~  214 (357)
                      +++++++|+|+|.+|+-++..++..|.+|+++.+.+
T Consensus        33 ~~~k~v~VIGgG~iG~E~A~~l~~~g~~Vtvie~~~   68 (133)
T d1q1ra2          33 IADNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAA   68 (133)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             ccCCEEEEECCchHHHHHHHHHHhhCcceeeeeecc
Confidence            567899999999999999999999999999998764

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=92.63  E-value=0.14  Score=39.41  Aligned_cols=83  Identities=13%  Similarity=0.099  Sum_probs=53.1

Q ss_pred             eEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHH--HHHHHHhcCCcEE----Ec---CCChhHHHHhhCCccEEEEcCC
Q 018382          183 RGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKK--RVEAMEHLGADQY----LV---SSDATRMQEAADSLDYIIDTVP  253 (357)
Q Consensus       183 ~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~--~~~~~~~~g~~~v----v~---~~~~~~~~~~~~~~d~v~d~~g  253 (357)
                      +|.|+|+|..|.+.+..+...|.+|++..+..+.  .+.+.+ -.....    +.   ....+.+.+.....|+|+.++.
T Consensus         2 kI~ViGaG~~GtalA~~la~~g~~V~l~~r~~~~~~~~~i~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~ad~Ii~avp   80 (180)
T d1txga2           2 IVSILGAGAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISA-GREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLGVS   80 (180)
T ss_dssp             EEEEESCCHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHT-TCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEECSC
T ss_pred             EEEEECCCHHHHHHHHHHHHCCCEEEEEEecccHHHHHHHhh-hhhhhhhcchhccccccccccHHHHHhccchhhcccc
Confidence            5789999999999998888889999998875333  223322 111000    00   0012334555668999999999


Q ss_pred             CCCChHHHHhcccc
Q 018382          254 ANHPLEPYLSLLKL  267 (357)
Q Consensus       254 ~~~~~~~~~~~l~~  267 (357)
                      .. .++..++.+.+
T Consensus        81 s~-~~~~~~~~l~~   93 (180)
T d1txga2          81 TD-GVLPVMSRILP   93 (180)
T ss_dssp             GG-GHHHHHHHHTT
T ss_pred             hh-hhHHHHHhhcc
Confidence            87 66666665444

>d1hdgo1 c.2.1.3 (O:1-148,O:313-331) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermotoga maritima [TaxId: 2336]

Probab=92.62  E-value=0.33  Score=36.78  Aligned_cols=95  Identities=16%  Similarity=0.204  Sum_probs=59.7

Q ss_pred             eEEEEecChHHHHHHHHHHHc---CCeEEEEeCC--cHHHHHHHHhcC-------C------cE---------EEcCCCh
Q 018382          183 RGGILGLGGVGHMGVLIAKAM---GHHVTVISSS--DKKRVEAMEHLG-------A------DQ---------YLVSSDA  235 (357)
Q Consensus       183 ~VlI~G~g~~G~~ai~la~~~---g~~V~~~~~~--~~~~~~~~~~~g-------~------~~---------vv~~~~~  235 (357)
                      +|.|.|-|-+|..+.+.+...   +.+|+++-..  .+....+.+ +-       .      +.         +.+.+++
T Consensus         2 kIgINGfGRIGR~v~R~~~~~~~~~i~vvaINd~~~~e~~ayLlk-yDS~hG~~~~~v~~~~~~l~ing~~I~~~~~~~p   80 (169)
T d1hdgo1           2 RVAINGFGRIGRLVYRIIYERKNPDIEVVAINDLTDTKTLAHLLK-YDSVHKKFPGKVEYTENSLIVDGKEIKVFAEPDP   80 (169)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHTCTTCEEEEEECSSCHHHHHHHHH-CCTTTCCCSSCEEECSSEEEETTEEEEEECCSSG
T ss_pred             EEEEECCChHHHHHHHHHHhccCCCEEEEEeccCccHHHHHHHHh-ccccccccCceEEEECCEEEECCEEEEEEeCCCh
Confidence            578999999999999877542   3577766432  233444444 21       1      11         1122233


Q ss_pred             hHHHHhhCCccEEEEcCCCCCChHHHHhccccCCeEEEEccCC
Q 018382          236 TRMQEAADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVIN  278 (357)
Q Consensus       236 ~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~  278 (357)
                      +.+.+..-++|+|+||+|.....+.+...+..+-+-|.+..+.
T Consensus        81 ~~i~W~~~gvD~ViEcTG~f~t~~~~~~hl~~GakkViiSAP~  123 (169)
T d1hdgo1          81 SKLPWKDLGVDFVIESTGVFRNREKAELHLQAGAKKVIITAPA  123 (169)
T ss_dssp             GGSCHHHHTCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSCC
T ss_pred             hhCCccccCCCEEEEecceeccccchhhhccCCCceEEEeccc
Confidence            3333333489999999999756777888888876666665543

>d1xtpa_ c.66.1.42 (A:) Hypothetical protein Lmaj004091aaa (LmjF30.0810) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Hypothetical protein Lmaj004091aaa (LmjF30.0810)
species: Leishmania major [TaxId: 5664]

Probab=92.54  E-value=0.098  Score=42.88  Aligned_cols=97  Identities=12%  Similarity=0.044  Sum_probs=63.3

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCC--ChhHHHHhhCCccEEEEcCCCC-
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSS--DATRMQEAADSLDYIIDTVPAN-  255 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~--~~~~~~~~~~~~d~v~d~~g~~-  255 (357)
                      .++.+||=+|+|. |..+..++.....+|++++.+++-.+.+++.+.....++..  +...+.-..+.+|+|+-.-.-. 
T Consensus        92 ~~~~~vLD~GcG~-G~~t~~ll~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD~I~~~~vl~h  170 (254)
T d1xtpa_          92 HGTSRALDCGAGI-GRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGMPVGKFILASMETATLPPNTYDLIVIQWTAIY  170 (254)
T ss_dssp             CCCSEEEEETCTT-THHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGGCCCCSSCEEEEEEESCGGG
T ss_pred             CCCCeEEEecccC-ChhhHHHHhhcCceEEEEcCCHHHHHhhhccccccccceeEEccccccccCCCccceEEeeccccc
Confidence            5677888888863 77778888766679999999999888888766532222211  1111111124799997643221 


Q ss_pred             -------CChHHHHhccccCCeEEEEcc
Q 018382          256 -------HPLEPYLSLLKLDGKLILTGV  276 (357)
Q Consensus       256 -------~~~~~~~~~l~~~G~~v~~g~  276 (357)
                             ..++.+.+.|+++|.++....
T Consensus       171 l~d~d~~~~l~~~~~~LkpgG~iii~e~  198 (254)
T d1xtpa_         171 LTDADFVKFFKHCQQALTPNGYIFFKEN  198 (254)
T ss_dssp             SCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             cchhhhHHHHHHHHHhcCCCcEEEEEec
Confidence                   135667788999999887544

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=92.52  E-value=0.073  Score=42.93  Aligned_cols=36  Identities=17%  Similarity=0.194  Sum_probs=32.6

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCc
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSD  214 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~  214 (357)
                      +..++|+|+|+|+.|+.++..++..|.+|+++..++
T Consensus        47 ~~~k~VvIIGaGpAGl~aA~~l~~~G~~v~l~E~~~   82 (233)
T d1djqa3          47 KNKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAE   82 (233)
T ss_dssp             SSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             cCCceEEEEcccHHHHHHHHHHHHhccceeeEeecc
Confidence            567899999999999999999999999999998665

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=92.51  E-value=0.33  Score=41.32  Aligned_cols=74  Identities=18%  Similarity=0.109  Sum_probs=50.8

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHH--HHHHHhcCCcEE-EcCCC-hhHHHHhhCCccEEEEcCC
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKR--VEAMEHLGADQY-LVSSD-ATRMQEAADSLDYIIDTVP  253 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~--~~~~~~~g~~~v-v~~~~-~~~~~~~~~~~d~v~d~~g  253 (357)
                      +.++|||+|+ |.+|..++..+...|.+|++++|+..+.  ..+...-|++.+ .|..+ .+.++.+..+.|.++....
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~v~~~~gD~~d~~~~~~~a~~~~~~~~~~~~   80 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTT   80 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEECCC
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhhhhhcccCCCEEEEeeCCCcHHHHHHHhcCCceEEeecc
Confidence            4678999987 9999999999999999999999876543  233331233322 13333 4556667778888876544

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=92.47  E-value=0.77  Score=33.94  Aligned_cols=91  Identities=15%  Similarity=0.272  Sum_probs=59.7

Q ss_pred             CeEEEEec-ChHHHHHHHHHHHcC--CeEEEEeCCc--HHHHHHHHhcCCcEEEcCCChh--------------------
Q 018382          182 LRGGILGL-GGVGHMGVLIAKAMG--HHVTVISSSD--KKRVEAMEHLGADQYLVSSDAT--------------------  236 (357)
Q Consensus       182 ~~VlI~G~-g~~G~~ai~la~~~g--~~V~~~~~~~--~~~~~~~~~~g~~~vv~~~~~~--------------------  236 (357)
                      +++.|+|+ |.+|..++.+.+...  .+|+..+...  +.+.....+|....++-.+...                    
T Consensus         2 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N~~~L~~q~~~f~pk~v~i~d~~~~~~l~~~l~~~~~~~~~~~g   81 (151)
T d1q0qa2           2 KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEFSPRYAVMDDEASAKLLKTMLQQQGSRTEVLSG   81 (151)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSCHHHHHHHHHHHCCSEEEESSHHHHHHHHHHHHHTTCCCEEEES
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecCcHHHHHHHHHHHhhcccccccHHHHHHHHHHhhhhccccccccC
Confidence            36899998 999999999998873  4777665433  3333333448877766443321                    


Q ss_pred             --HHHHhh--CCccEEEEcCCCCCChHHHHhccccCCeEE
Q 018382          237 --RMQEAA--DSLDYIIDTVPANHPLEPYLSLLKLDGKLI  272 (357)
Q Consensus       237 --~~~~~~--~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v  272 (357)
                        .+.++.  ..+|+|+....+...+...+..++.+-++.
T Consensus        82 ~~~l~~~~~~~~~D~vi~AI~G~aGL~~t~~aik~gk~ia  121 (151)
T d1q0qa2          82 QQAACDMAALEDVDQVMAAIVGAAGLLPTLAAIRAGKTIL  121 (151)
T ss_dssp             HHHHHHHHTCTTCCEEEECCSSGGGHHHHHHHHHTTCEEE
T ss_pred             hHHHHHHhcCCCCCEEEEecCcccHHHHHHHHHhcCCeEE
Confidence              111111  168999988877667777878777776543

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=92.46  E-value=0.085  Score=42.68  Aligned_cols=35  Identities=29%  Similarity=0.375  Sum_probs=31.0

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCC
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSS  213 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~  213 (357)
                      +..++|+|+|+|..|++++..+...|.+|+++.+.
T Consensus         4 ~~~~kVvVIGaGiaGl~~A~~L~~~G~~V~vier~   38 (268)
T d1c0pa1           4 HSQKRVVVLGSGVIGLSSALILARKGYSVHILARD   38 (268)
T ss_dssp             CCSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCCcEEEECccHHHHHHHHHHHHCCCCEEEEeCC
Confidence            44568999999999999999999999999999864

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=92.42  E-value=0.12  Score=40.24  Aligned_cols=84  Identities=25%  Similarity=0.315  Sum_probs=57.7

Q ss_pred             CCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCC----
Q 018382          180 SGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPAN----  255 (357)
Q Consensus       180 ~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~----  255 (357)
                      .+.+|.|+|.|.+|...+++++.+|++|+..++.....      ....  ...   ..++++....|++.-+..-.    
T Consensus        43 ~~~~vgiiG~G~IG~~va~~l~~fg~~v~~~d~~~~~~------~~~~--~~~---~~l~ell~~sDii~i~~plt~~T~  111 (188)
T d1sc6a1          43 RGKKLGIIGYGHIGTQLGILAESLGMYVYFYDIENKLP------LGNA--TQV---QHLSDLLNMSDVVSLHVPENPSTK  111 (188)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCC------CTTC--EEC---SCHHHHHHHCSEEEECCCSSTTTT
T ss_pred             cceEEEEeecccchhhhhhhcccccceEeeccccccch------hhhh--hhh---hhHHHHHhhccceeecccCCcchh
Confidence            57899999999999999999999999999998753321      1111  111   12344545688888765432    


Q ss_pred             CC-hHHHHhccccCCeEEEE
Q 018382          256 HP-LEPYLSLLKLDGKLILT  274 (357)
Q Consensus       256 ~~-~~~~~~~l~~~G~~v~~  274 (357)
                      .. -...++.|+++..+|.+
T Consensus       112 ~li~~~~l~~mk~~a~lIN~  131 (188)
T d1sc6a1         112 NMMGAKEISLMKPGSLLINA  131 (188)
T ss_dssp             TCBCHHHHHHSCTTEEEEEC
T ss_pred             hhccHHHHhhCCCCCEEEEc
Confidence            12 24677888888887776

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=92.40  E-value=0.096  Score=37.12  Aligned_cols=34  Identities=18%  Similarity=0.243  Sum_probs=30.9

Q ss_pred             CCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCc
Q 018382          181 GLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSD  214 (357)
Q Consensus       181 ~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~  214 (357)
                      .++++|+|+|.+|+-+++.++.+|.+|+++.+.+
T Consensus        21 p~~vvIiGgG~~G~E~A~~l~~~g~~Vtlve~~~   54 (115)
T d1lvla2          21 PQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARE   54 (115)
T ss_dssp             CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCeEEEECCCHHHHHHHHHHhhcccceEEEeeec
Confidence            3789999999999999999999999999998764

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=92.39  E-value=0.22  Score=42.36  Aligned_cols=96  Identities=26%  Similarity=0.227  Sum_probs=59.9

Q ss_pred             CCCCCeEEEEec--ChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhc---CC---cEEEcCCChhHHHHh---hCCc
Q 018382          178 KQSGLRGGILGL--GGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHL---GA---DQYLVSSDATRMQEA---ADSL  245 (357)
Q Consensus       178 ~~~~~~VlI~G~--g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~---g~---~~vv~~~~~~~~~~~---~~~~  245 (357)
                      +++|++||=+++  |+.++   .+++. |+ +|+.++.++...+.+++.+   |.   .+++..+..+++..+   ...|
T Consensus       143 ~~~g~~VLDl~~g~G~~si---~~a~~-ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~~d~~~~~~~~~~~~~~f  218 (324)
T d2as0a2         143 VQPGDRVLDVFTYTGGFAI---HAAIA-GADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKF  218 (324)
T ss_dssp             CCTTCEEEETTCTTTHHHH---HHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCE
T ss_pred             cCCCCeeecccCcccchhh---hhhhc-CCcEEEeecCCHHHHHHHHHHHHHcCCCccceeeechhhhhhHHHHhccCCC
Confidence            378999988865  44444   44444 66 8999999998877765533   33   123333323444333   2479


Q ss_pred             cEEEEcCCCC---------------CChHHHHhccccCCeEEEEccC
Q 018382          246 DYIIDTVPAN---------------HPLEPYLSLLKLDGKLILTGVI  277 (357)
Q Consensus       246 d~v~d~~g~~---------------~~~~~~~~~l~~~G~~v~~g~~  277 (357)
                      |+|+--....               ..+..+.++|+|+|.++.....
T Consensus       219 D~Vi~DpP~~~~~~~~~~~~~~~y~~l~~~a~~ll~pGG~lv~~s~s  265 (324)
T d2as0a2         219 DIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCS  265 (324)
T ss_dssp             EEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECC
T ss_pred             CchhcCCccccCCHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEeCC
Confidence            9997422211               1355677899999999887544

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=92.34  E-value=0.13  Score=38.55  Aligned_cols=75  Identities=12%  Similarity=0.071  Sum_probs=47.9

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHh-------cCCcEEEcCCChhHHHHhhCCccEEEE
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEH-------LGADQYLVSSDATRMQEAADSLDYIID  250 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~-------~g~~~vv~~~~~~~~~~~~~~~d~v~d  250 (357)
                      ++..+|.|+|+|.+|..++.++...+. +++..+.++++.+.....       ++....+..  ....++...+.|+|+-
T Consensus         5 ~k~~KI~IIGaG~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~--~~~~~~~~~~adiVvi   82 (154)
T d1pzga1           5 QRRKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRA--EYSYEAALTGADCVIV   82 (154)
T ss_dssp             SCCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEE--ECSHHHHHTTCSEEEE
T ss_pred             cCCCcEEEECCCHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEec--cCchhhhhcCCCeEEE
Confidence            566889999999999888888777775 888888777654332221       121111111  1122344568999998


Q ss_pred             cCCCC
Q 018382          251 TVPAN  255 (357)
Q Consensus       251 ~~g~~  255 (357)
                      ++|..
T Consensus        83 tag~~   87 (154)
T d1pzga1          83 TAGLT   87 (154)
T ss_dssp             CCSCS
T ss_pred             ecccc
Confidence            88754

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=92.31  E-value=0.19  Score=42.46  Aligned_cols=74  Identities=12%  Similarity=0.042  Sum_probs=46.9

Q ss_pred             CeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcH-----HHHHH---HHhcC--CcEE--EcCCChhHHHHhh--CCcc
Q 018382          182 LRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDK-----KRVEA---MEHLG--ADQY--LVSSDATRMQEAA--DSLD  246 (357)
Q Consensus       182 ~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~-----~~~~~---~~~~g--~~~v--v~~~~~~~~~~~~--~~~d  246 (357)
                      +++||+|+ |-+|..++..+...|.+|+++++...     +...+   .....  ....  .|..+.+.+....  .++|
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~D   81 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKPD   81 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhhccc
Confidence            57899987 99999999999999999999997422     11111   01011  1111  2334444444432  3889


Q ss_pred             EEEEcCCCC
Q 018382          247 YIIDTVPAN  255 (357)
Q Consensus       247 ~v~d~~g~~  255 (357)
                      +|+.+++..
T Consensus        82 ~Vih~Aa~~   90 (339)
T d1n7ha_          82 EVYNLAAQS   90 (339)
T ss_dssp             EEEECCSCC
T ss_pred             hhhhccccc
Confidence            999998764

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=92.28  E-value=0.078  Score=45.26  Aligned_cols=73  Identities=15%  Similarity=0.018  Sum_probs=48.0

Q ss_pred             eEEEEec-ChHHHHHHHHHHHcC-CeEEEEeCCcHHHHHHHHhcCCcEEE-cCCC-hhHHHHhhCCccEEEEcCCCC
Q 018382          183 RGGILGL-GGVGHMGVLIAKAMG-HHVTVISSSDKKRVEAMEHLGADQYL-VSSD-ATRMQEAADSLDYIIDTVPAN  255 (357)
Q Consensus       183 ~VlI~G~-g~~G~~ai~la~~~g-~~V~~~~~~~~~~~~~~~~~g~~~vv-~~~~-~~~~~~~~~~~d~v~d~~g~~  255 (357)
                      +|||+|+ |-+|..+++.+...| .+|++++....+...+.+.-....+. |..+ .+..+....++|+||.+++-.
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~~~~~~~i~~Di~~~~~~~~~~~~~~d~Vih~a~~~   78 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIA   78 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHHHCSEEEECBCCC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhccCCCeEEEECccCChHHHHHHHHhCCCccccccccc
Confidence            5899987 999999998887777 58999887655544443312222221 3223 234444555899999988764

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.28  E-value=0.093  Score=44.41  Aligned_cols=98  Identities=14%  Similarity=0.084  Sum_probs=53.3

Q ss_pred             hhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHH--HHhcCC---cEEEcCCChhHHHHhhCCc
Q 018382          172 LSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEA--MEHLGA---DQYLVSSDATRMQEAADSL  245 (357)
Q Consensus       172 l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~--~~~~g~---~~vv~~~~~~~~~~~~~~~  245 (357)
                      +.+...+.++++||-+|+| .|..++.+|+ .|+ +|+++..++......  .++.+.   ..++..+..+ +......+
T Consensus        27 i~~~~~~~~~~~VLDiGcG-~G~lsl~aa~-~Ga~~V~aid~s~~~~~a~~~~~~~~~~~~i~~~~~~~~~-l~~~~~~~  103 (311)
T d2fyta1          27 IYQNPHIFKDKVVLDVGCG-TGILSMFAAK-AGAKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEE-VHLPVEKV  103 (311)
T ss_dssp             HHHCGGGTTTCEEEEETCT-TSHHHHHHHH-TTCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTT-SCCSCSCE
T ss_pred             HHhccccCCcCEEEEECCC-CCHHHHHHHH-cCCCEEEEEeCHHHHHHHHHHHHHhCCCccceEEEeeHHH-hcCccccc
Confidence            4444444689999999886 4555555555 476 899999887543211  122331   1223222111 11112479


Q ss_pred             cEEEEc-CCC----CCChHH----HHhccccCCeEE
Q 018382          246 DYIIDT-VPA----NHPLEP----YLSLLKLDGKLI  272 (357)
Q Consensus       246 d~v~d~-~g~----~~~~~~----~~~~l~~~G~~v  272 (357)
                      |+|+.- .+.    ...+..    ..+.|+|+|+++
T Consensus       104 D~Ivse~~~~~~~~e~~~~~~~~a~~~~Lkp~G~ii  139 (311)
T d2fyta1         104 DVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVY  139 (311)
T ss_dssp             EEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred             eEEEEeeeeeecccccccHHHHHHHHhcCCCCcEEe
Confidence            999752 222    112222    235799999886

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=92.25  E-value=0.098  Score=37.79  Aligned_cols=36  Identities=19%  Similarity=0.180  Sum_probs=32.2

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCc
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSD  214 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~  214 (357)
                      +..++++|+|+|.+|+=+++.++.+|.+|+++.+.+
T Consensus        24 ~~p~~vvIiGgG~IG~E~A~~~~~~G~~Vtive~~~   59 (125)
T d1ojta2          24 EVPGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMD   59 (125)
T ss_dssp             CCCSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             ccCCeEEEECCCHHHHHHHHHhhcCCCEEEEEEeec
Confidence            445889999999999999999999999999998764

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.24  E-value=0.058  Score=44.92  Aligned_cols=33  Identities=15%  Similarity=0.227  Sum_probs=30.0

Q ss_pred             eEEEEecChHHHHHHHHHHHcCCeEEEEeCCcH
Q 018382          183 RGGILGLGGVGHMGVLIAKAMGHHVTVISSSDK  215 (357)
Q Consensus       183 ~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~  215 (357)
                      .|+|+|+|+.|++++..++..|.+|.++.+.++
T Consensus         4 ~V~IvGaGp~Gl~~A~~L~~~G~~v~vlE~~~~   36 (292)
T d1k0ia1           4 QVAIIGAGPSGLLLGQLLHKAGIDNVILERQTP   36 (292)
T ss_dssp             SEEEECCSHHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred             CEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            599999999999999999999999999987653

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=92.22  E-value=0.065  Score=43.81  Aligned_cols=34  Identities=26%  Similarity=0.280  Sum_probs=29.3

Q ss_pred             CeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcH
Q 018382          182 LRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDK  215 (357)
Q Consensus       182 ~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~  215 (357)
                      +.|||+|+ +++|++.++.+...|++|++++++++
T Consensus         2 kVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~   36 (257)
T d1fjha_           2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDA   36 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChH
Confidence            45788886 99999999999999999999987643

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=92.17  E-value=0.075  Score=38.28  Aligned_cols=37  Identities=19%  Similarity=0.197  Sum_probs=32.7

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcH
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDK  215 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~  215 (357)
                      +..++++|+|+|.+|+=+++.++.+|.+|+++.+++.
T Consensus        23 ~~p~~~viiG~G~iglE~A~~~~~~G~~Vtvi~~~~~   59 (123)
T d1dxla2          23 EIPKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASE   59 (123)
T ss_dssp             SCCSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             ccCCeEEEEccchHHHHHHHHHHhcCCeEEEEEEccc
Confidence            3457899999999999999999999999999987643

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.11  E-value=0.15  Score=40.05  Aligned_cols=71  Identities=24%  Similarity=0.179  Sum_probs=48.8

Q ss_pred             eEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHH---------------HHhhCCccE
Q 018382          183 RGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRM---------------QEAADSLDY  247 (357)
Q Consensus       183 ~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~---------------~~~~~~~d~  247 (357)
                      +|.|+|.|-+|+.++..+...|.+|++.+.++++.+.+.+  |..........+.+               .+.....|+
T Consensus         2 kI~ViGlG~vGl~~a~~la~~g~~V~g~D~n~~~i~~ln~--g~~p~~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~d~   79 (202)
T d1mv8a2           2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQ--GKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSDV   79 (202)
T ss_dssp             EEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHT--TCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCSE
T ss_pred             EEEEECCCHhHHHHHHHHHhCCCcEEEEeCCHHHHHHhcc--cCCcccchhhhhhhhhhhcccccccCCCHHHHHhhCCE
Confidence            4788999999999888888889999999998888777655  32221111111111               111226899


Q ss_pred             EEEcCCCC
Q 018382          248 IIDTVPAN  255 (357)
Q Consensus       248 v~d~~g~~  255 (357)
                      +|-|++++
T Consensus        80 i~i~VpTP   87 (202)
T d1mv8a2          80 SFICVGTP   87 (202)
T ss_dssp             EEECCCCC
T ss_pred             EEEecCcc
Confidence            99999874

>d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose-fructose oxidoreductase, N-terminal domain
species: Zymomonas mobilis [TaxId: 542]

Probab=92.07  E-value=0.15  Score=40.66  Aligned_cols=92  Identities=17%  Similarity=0.142  Sum_probs=58.1

Q ss_pred             eEEEEecChHHHH-HHHHHHHc-CCeEEEE-eCCcHHHHHHHHhcCCc--EEEcCCChhHHHHhh-CCccEEEEcCCCCC
Q 018382          183 RGGILGLGGVGHM-GVLIAKAM-GHHVTVI-SSSDKKRVEAMEHLGAD--QYLVSSDATRMQEAA-DSLDYIIDTVPANH  256 (357)
Q Consensus       183 ~VlI~G~g~~G~~-ai~la~~~-g~~V~~~-~~~~~~~~~~~~~~g~~--~vv~~~~~~~~~~~~-~~~d~v~d~~g~~~  256 (357)
                      +|.|+|+|.+|.. .+...+.. +.+++++ ++++++.+.+.+++|..  .+..+++.+.  -+. ..+|+|+-++....
T Consensus        35 riaiIG~G~~~~~~~~~~~~~~~~~~ivav~d~~~~~a~~~~~~~~i~~~~~~~~~d~~e--ll~~~~iD~V~I~tp~~~  112 (221)
T d1h6da1          35 GYAIVGLGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDYSNFDK--IAKDPKIDAVYIILPNSL  112 (221)
T ss_dssp             EEEEECCSHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHTTCCGGGEECSSSGGG--GGGCTTCCEEEECSCGGG
T ss_pred             EEEEEcCcHHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHhhccccccccccCchhh--hcccccceeeeeccchhh
Confidence            6788999999863 44444444 6688855 45667777777768742  2333443221  122 37999998888875


Q ss_pred             ChHHHHhccccCCeEEEEccC
Q 018382          257 PLEPYLSLLKLDGKLILTGVI  277 (357)
Q Consensus       257 ~~~~~~~~l~~~G~~v~~g~~  277 (357)
                      ....+.++++. |+=+.+.-+
T Consensus       113 H~~~~~~al~~-gk~v~~EKP  132 (221)
T d1h6da1         113 HAEFAIRAFKA-GKHVMCEKP  132 (221)
T ss_dssp             HHHHHHHHHHT-TCEEEECSS
T ss_pred             hhhHHHHhhhc-chhhhcCCC
Confidence            56677777765 455666543

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=91.98  E-value=0.96  Score=33.12  Aligned_cols=73  Identities=15%  Similarity=0.197  Sum_probs=45.4

Q ss_pred             CeEEEEec-ChHHHHHHHHHHHcCC--eEEEEeCCcHHHHHHHHhcCCcEEEc---CCChhHHHHhhCCccEEEEcCCCC
Q 018382          182 LRGGILGL-GGVGHMGVLIAKAMGH--HVTVISSSDKKRVEAMEHLGADQYLV---SSDATRMQEAADSLDYIIDTVPAN  255 (357)
Q Consensus       182 ~~VlI~G~-g~~G~~ai~la~~~g~--~V~~~~~~~~~~~~~~~~~g~~~vv~---~~~~~~~~~~~~~~d~v~d~~g~~  255 (357)
                      .+|.|+|+ |.+|...+.++...+.  +++.++..+.+.+ +.+-.-+.....   .-......+...+.|+|+-+.|.+
T Consensus         1 sKv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~-a~Dl~~~~~~~~~~~~~~~~~~~~~~~~aDivVitag~~   79 (144)
T d1mlda1           1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGV-AADLSHIETRATVKGYLGPEQLPDCLKGCDVVVIPAGVP   79 (144)
T ss_dssp             CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHH-HHHHTTSSSSCEEEEEESGGGHHHHHTTCSEEEECCSCC
T ss_pred             CeEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchh-hHHHhhhhhhcCCCeEEcCCChHHHhCCCCEEEECCCcC
Confidence            36889996 9999999999988886  6777777655433 333111110000   001222334557899999988853

>d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia carotovora [TaxId: 554]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein ECA1738
species: Erwinia carotovora [TaxId: 554]

Probab=91.92  E-value=0.13  Score=41.12  Aligned_cols=92  Identities=18%  Similarity=0.114  Sum_probs=56.8

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCc-EEEcCCChhHHHHhhCCccEEEEcC-----
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGAD-QYLVSSDATRMQEAADSLDYIIDTV-----  252 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~~~~~~d~v~d~~-----  252 (357)
                      .++++||=+|+|. |..+..+++ .|.+|++++.+++..+.++++.... .++.. +.+.. ...+.+|+|+-.-     
T Consensus        19 ~~~~~VLDiGcG~-G~~~~~l~~-~g~~v~giD~s~~~i~~a~~~~~~~~~~~~~-~~~~~-~~~~~fD~I~~~~vleh~   94 (225)
T d2p7ia1          19 FRPGNLLELGSFK-GDFTSRLQE-HFNDITCVEASEEAISHAQGRLKDGITYIHS-RFEDA-QLPRRYDNIVLTHVLEHI   94 (225)
T ss_dssp             CCSSCEEEESCTT-SHHHHHHTT-TCSCEEEEESCHHHHHHHHHHSCSCEEEEES-CGGGC-CCSSCEEEEEEESCGGGC
T ss_pred             CCCCcEEEEeCCC-cHHHHHHHH-cCCeEEEEeCcHHHhhhhhcccccccccccc-ccccc-ccccccccccccceeEec
Confidence            4567899998753 555555554 4789999999999888888765532 22222 21111 1235799987422     


Q ss_pred             CCC-CChHHHH-hccccCCeEEEE
Q 018382          253 PAN-HPLEPYL-SLLKLDGKLILT  274 (357)
Q Consensus       253 g~~-~~~~~~~-~~l~~~G~~v~~  274 (357)
                      ... ..+.... ++|+++|.++..
T Consensus        95 ~d~~~~l~~i~~~~Lk~gG~l~i~  118 (225)
T d2p7ia1          95 DDPVALLKRINDDWLAEGGRLFLV  118 (225)
T ss_dssp             SSHHHHHHHHHHTTEEEEEEEEEE
T ss_pred             CCHHHHHHHHHHHhcCCCceEEEE
Confidence            111 1233444 679999998764

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=91.89  E-value=0.42  Score=38.91  Aligned_cols=42  Identities=17%  Similarity=0.200  Sum_probs=34.7

Q ss_pred             hhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeC
Q 018382          171 PLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISS  212 (357)
Q Consensus       171 ~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~  212 (357)
                      ++.+.+.--.|.+|+|.|.|.+|..+++++...|++|++++.
T Consensus        26 ~~~~~~~~l~g~~v~IQGfGnVG~~~a~~L~e~GakvvavsD   67 (255)
T d1bgva1          26 VMKHENDTLVGKTVALAGFGNVAWGAAKKLAELGAKAVTLSG   67 (255)
T ss_dssp             HHHHTTCCSTTCEEEECCSSHHHHHHHHHHHHHTCEEEEEEE
T ss_pred             HHHhCCCCCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEEec
Confidence            344444424689999999999999999999999999998864

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=91.82  E-value=0.061  Score=45.77  Aligned_cols=91  Identities=19%  Similarity=0.111  Sum_probs=50.3

Q ss_pred             CCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHH---HhcCC-c--EEEcCCChhHHHHhhCCccEEEE
Q 018382          178 KQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAM---EHLGA-D--QYLVSSDATRMQEAADSLDYIID  250 (357)
Q Consensus       178 ~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~---~~~g~-~--~vv~~~~~~~~~~~~~~~d~v~d  250 (357)
                      +.+|++||-+|+|. |..++.+|+ .|+ +|++++.++.. ..++   +.-+. +  .++..+..+ +....+.+|+|+.
T Consensus        31 ~~~~~~VLDiGcG~-G~ls~~aa~-~Ga~~V~avd~s~~~-~~a~~~~~~n~~~~~v~~~~~~~~~-~~~~~~~~D~ivs  106 (316)
T d1oria_          31 LFKDKVVLDVGSGT-GILCMFAAK-AGARKVIGIECSSIS-DYAVKIVKANKLDHVVTIIKGKVEE-VELPVEKVDIIIS  106 (316)
T ss_dssp             HHTTCEEEEETCTT-SHHHHHHHH-TTCSEEEEEECSTTH-HHHHHHHHHTTCTTTEEEEESCTTT-CCCSSSCEEEEEE
T ss_pred             cCCcCEEEEEecCC-cHHHHHHHH-hCCCEEEEEcCcHHH-hhhhhHHHHhCCccccceEeccHHH-cccccceeEEEee
Confidence            36899999998864 666665555 576 79999977642 2222   21232 1  222222111 1111247899875


Q ss_pred             cC-CC----CCCh----HHHHhccccCCeEE
Q 018382          251 TV-PA----NHPL----EPYLSLLKLDGKLI  272 (357)
Q Consensus       251 ~~-g~----~~~~----~~~~~~l~~~G~~v  272 (357)
                      .. +.    ...+    ...-+.|+|+|+++
T Consensus       107 ~~~~~~l~~e~~~~~~l~~~~r~Lkp~G~ii  137 (316)
T d1oria_         107 EWMGYCLFYESMLNTVLHARDKWLAPDGLIF  137 (316)
T ss_dssp             CCCBBTBTBTCCHHHHHHHHHHHEEEEEEEE
T ss_pred             eeeeeeeccHHHHHHHHHHHHhcCCCCeEEE
Confidence            32 21    1122    23457899999876

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=91.62  E-value=0.1  Score=43.87  Aligned_cols=35  Identities=29%  Similarity=0.386  Sum_probs=30.8

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCC
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSS  213 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~  213 (357)
                      ...++|+|+|+|..|+.++..+...|.+|+++...
T Consensus        28 ~~pkkV~IIGaG~aGLsaA~~L~~~G~~V~vlE~~   62 (370)
T d2iida1          28 SNPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEAS   62 (370)
T ss_dssp             SSCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSS
T ss_pred             CCCCeEEEECCCHHHHHHHHHHHHCCCCEEEEeCC
Confidence            34568999999999999999998889999999865

>d1nw3a_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.57  E-value=0.65  Score=39.27  Aligned_cols=102  Identities=17%  Similarity=0.097  Sum_probs=62.4

Q ss_pred             hhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHh----------cCC----cEEEcC--C
Q 018382          171 PLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEH----------LGA----DQYLVS--S  233 (357)
Q Consensus       171 ~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~----------~g~----~~vv~~--~  233 (357)
                      .+..+. ++++++||-+|+| .|..++++|+..++ +++.++.++...+.+++.          +|.    -.++..  .
T Consensus       143 ~~~~~~-l~~~~~vlD~GcG-~G~~~~~~a~~~~~~~~~Gid~s~~~~~~a~~~~~~~~~~~~~~g~~~~~i~~~~gd~~  220 (328)
T d1nw3a_         143 MIDEIK-MTDDDLFVDLGSG-VGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFL  220 (328)
T ss_dssp             HHHHSC-CCTTCEEEEETCT-TSHHHHHHHHHCCCSEEEEEECSHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEECCTT
T ss_pred             HHHHcC-CCCCCEEEEcCCC-CCHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHhhhccccCCceEEEECccc
Confidence            444444 4999999999986 37778899998888 799999988765544331          221    122221  1


Q ss_pred             ChhHHHHhhCCccEEEEcCC-C-C---CChHHHHhccccCCeEEEEc
Q 018382          234 DATRMQEAADSLDYIIDTVP-A-N---HPLEPYLSLLKLDGKLILTG  275 (357)
Q Consensus       234 ~~~~~~~~~~~~d~v~d~~g-~-~---~~~~~~~~~l~~~G~~v~~g  275 (357)
                      +... .+....+|+|+-..- . .   ..+...++.|+|||++|...
T Consensus       221 ~~~~-~~~~~~advi~~~~~~f~~~~~~~l~e~~r~LKpGg~iv~~~  266 (328)
T d1nw3a_         221 SEEW-RERIANTSVIFVNNFAFGPEVDHQLKERFANMKEGGRIVSSK  266 (328)
T ss_dssp             SHHH-HHHHHHCSEEEECCTTTCHHHHHHHHHHHTTCCTTCEEEESS
T ss_pred             cccc-ccccCcceEEEEcceecchHHHHHHHHHHHhCCCCcEEEEec
Confidence            2222 111224688874221 1 1   13455778899999998764

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=91.54  E-value=0.078  Score=43.05  Aligned_cols=91  Identities=15%  Similarity=0.115  Sum_probs=57.4

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc---CCc-EEEcCCChhHHHHhhCCccEEEEcCCC
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL---GAD-QYLVSSDATRMQEAADSLDYIIDTVPA  254 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~---g~~-~vv~~~~~~~~~~~~~~~d~v~d~~g~  254 (357)
                      .++++||=+|+| .|..+..+++ .|.+|++++.+++-.+.++++.   |.. .++.. +...+ ...+.+|+|+...+.
T Consensus        36 ~~~~~vLDiGCG-~G~~~~~l~~-~g~~v~GvD~S~~ml~~A~~~~~~~~~~v~~~~~-d~~~~-~~~~~fD~i~~~~~~  111 (246)
T d1y8ca_          36 LVFDDYLDLACG-TGNLTENLCP-KFKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQ-DISNL-NINRKFDLITCCLDS  111 (246)
T ss_dssp             CCTTEEEEETCT-TSTTHHHHGG-GSSEEEEECSCHHHHHHHHHHHHHTTCCCEEECC-CGGGC-CCSCCEEEEEECTTG
T ss_pred             CCCCeEEEEeCc-CCHHHHHHHH-hCCccEeeccchhhhhhccccccccCccceeecc-chhhh-cccccccccceeeee
Confidence            346789999986 3666666665 4889999999988776665532   322 23322 21111 123479999854332


Q ss_pred             C----------CChHHHHhccccCCeEEE
Q 018382          255 N----------HPLEPYLSLLKLDGKLIL  273 (357)
Q Consensus       255 ~----------~~~~~~~~~l~~~G~~v~  273 (357)
                      -          ..+..+.+.|+|+|.++.
T Consensus       112 ~~~~~~~~~~~~~l~~~~~~LkpgG~~i~  140 (246)
T d1y8ca_         112 TNYIIDSDDLKKYFKAVSNHLKEGGVFIF  140 (246)
T ss_dssp             GGGCCSHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred             eeccCCHHHHHHHHHHHHHhCCCCeEEEE
Confidence            1          135668888999999874

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=91.50  E-value=0.14  Score=36.72  Aligned_cols=36  Identities=22%  Similarity=0.158  Sum_probs=31.9

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCc
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSD  214 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~  214 (357)
                      +.+++++|+|+|.+|+-+++.+...|.+|+++.+++
T Consensus        30 ~~~~~vvIiGgG~iG~E~A~~l~~~g~~Vtlv~~~~   65 (122)
T d1xhca2          30 ENSGEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGA   65 (122)
T ss_dssp             HHHSEEEEEECSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             hcCCcEEEECCcHHHHHHHHHhhcccceEEEEeccc
Confidence            345789999999999999999999999999998764

>d1tw3a2 c.66.1.12 (A:99-351) Carminomycin 4-O-methyltransferase {Streptomyces peucetius [TaxId: 1950]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Plant O-methyltransferase, C-terminal domain
domain: Carminomycin 4-O-methyltransferase
species: Streptomyces peucetius [TaxId: 1950]

Probab=91.45  E-value=0.072  Score=43.64  Aligned_cols=95  Identities=17%  Similarity=0.101  Sum_probs=56.9

Q ss_pred             CCCCCCeEEEEecChHHHHHHHHHHHc-CCeEEEEeCCcHHHHHHHH---hcCC-c--EEEcCCChhHHHHhhCCccEEE
Q 018382          177 LKQSGLRGGILGLGGVGHMGVLIAKAM-GHHVTVISSSDKKRVEAME---HLGA-D--QYLVSSDATRMQEAADSLDYII  249 (357)
Q Consensus       177 ~~~~~~~VlI~G~g~~G~~ai~la~~~-g~~V~~~~~~~~~~~~~~~---~~g~-~--~vv~~~~~~~~~~~~~~~d~v~  249 (357)
                      .+.+.++||=+|+| .|..++.+++.. +.++++++.+ +..+.+++   ..|. +  ..+..   +..+....++|+|+
T Consensus        77 d~~~~~~VLDvGcG-~G~~~~~la~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~~~rv~~~~~---D~~~~~~~~~D~v~  151 (253)
T d1tw3a2          77 DWTNVRHVLDVGGG-KGGFAAAIARRAPHVSATVLEMA-GTVDTARSYLKDEGLSDRVDVVEG---DFFEPLPRKADAII  151 (253)
T ss_dssp             CCTTCSEEEEETCT-TSHHHHHHHHHCTTCEEEEEECT-THHHHHHHHHHHTTCTTTEEEEEC---CTTSCCSSCEEEEE
T ss_pred             CCccCCEEEEeCCC-CCHHHHHHHHhcceeEEEEccCH-HHHHHHHHHHHHhhcccchhhccc---cchhhcccchhhee
Confidence            34677889999875 377788888877 5688888864 33333322   2342 1  11211   11122234789987


Q ss_pred             EcCC-----CC---CChHHHHhccccCCeEEEEcc
Q 018382          250 DTVP-----AN---HPLEPYLSLLKLDGKLILTGV  276 (357)
Q Consensus       250 d~~g-----~~---~~~~~~~~~l~~~G~~v~~g~  276 (357)
                      -..-     ..   ..+..+.+.|+|+|+++....
T Consensus       152 ~~~vlh~~~d~~~~~~L~~~~~~LkPGG~l~i~e~  186 (253)
T d1tw3a2         152 LSFVLLNWPDHDAVRILTRCAEALEPGGRILIHER  186 (253)
T ss_dssp             EESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred             eccccccCCchhhHHHHHHHHHhcCCCcEEEEEec
Confidence            4321     11   135678889999999987754

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=91.40  E-value=0.12  Score=39.21  Aligned_cols=35  Identities=23%  Similarity=0.259  Sum_probs=29.5

Q ss_pred             CCCeEEEEecChHHHHHHHHHHHcCC--eEEEEeCCc
Q 018382          180 SGLRGGILGLGGVGHMGVLIAKAMGH--HVTVISSSD  214 (357)
Q Consensus       180 ~~~~VlI~G~g~~G~~ai~la~~~g~--~V~~~~~~~  214 (357)
                      .|++|+|+|+|..|+.+++-++..+.  +|+++.+.+
T Consensus         1 ~gkrivIvGgG~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCCcEEEECccHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            47899999999999999988887774  788887654

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=91.40  E-value=0.12  Score=43.22  Aligned_cols=37  Identities=24%  Similarity=0.192  Sum_probs=32.1

Q ss_pred             CCCeEEEEec-C--hHHHHHHHHHHHcCCeEEEEeCCcHH
Q 018382          180 SGLRGGILGL-G--GVGHMGVLIAKAMGHHVTVISSSDKK  216 (357)
Q Consensus       180 ~~~~VlI~G~-g--~~G~~ai~la~~~g~~V~~~~~~~~~  216 (357)
                      +|+++||+|+ |  ++|.+.++.+...|++|++..+++..
T Consensus         7 ~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~   46 (297)
T d1d7oa_           7 RGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPAL   46 (297)
T ss_dssp             TTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhh
Confidence            6889999987 4  89999999999999999998876543

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=91.37  E-value=0.25  Score=38.59  Aligned_cols=73  Identities=19%  Similarity=0.177  Sum_probs=47.8

Q ss_pred             hhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEE
Q 018382          172 LSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIID  250 (357)
Q Consensus       172 l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d  250 (357)
                      +...+. -.|++||=+|+|. |..++.++ ..|+ +|+.++.+++..+.+++......++..+    +.++.+.+|+||-
T Consensus        41 ~~~~~d-l~Gk~VLDlGcGt-G~l~i~a~-~~ga~~V~~vDid~~a~~~ar~N~~~~~~~~~D----~~~l~~~fD~Vi~  113 (197)
T d1ne2a_          41 IYNDGN-IGGRSVIDAGTGN-GILACGSY-LLGAESVTAFDIDPDAIETAKRNCGGVNFMVAD----VSEISGKYDTWIM  113 (197)
T ss_dssp             HHHHTS-SBTSEEEEETCTT-CHHHHHHH-HTTBSEEEEEESCHHHHHHHHHHCTTSEEEECC----GGGCCCCEEEEEE
T ss_pred             HHHcCC-CCCCEEEEeCCCC-cHHHHHHH-HcCCCcccccccCHHHHHHHHHccccccEEEEe----hhhcCCcceEEEe
Confidence            344455 4689999998753 44444433 4566 7999999988888888866544444332    2335568999885


Q ss_pred             c
Q 018382          251 T  251 (357)
Q Consensus       251 ~  251 (357)
                      .
T Consensus       114 N  114 (197)
T d1ne2a_         114 N  114 (197)
T ss_dssp             C
T ss_pred             C
Confidence            3

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=91.37  E-value=0.24  Score=41.93  Aligned_cols=95  Identities=20%  Similarity=0.162  Sum_probs=59.1

Q ss_pred             CCCCeEEEEec--ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCCc--EEEcCCChhHHHHh---hCCccEE
Q 018382          179 QSGLRGGILGL--GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGAD--QYLVSSDATRMQEA---ADSLDYI  248 (357)
Q Consensus       179 ~~~~~VlI~G~--g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~~--~vv~~~~~~~~~~~---~~~~d~v  248 (357)
                      .+|++||=+++  |+.+   +++++ .+.+|+.++.++...+.+++.   .|.+  .++..+..++.+.+   .+.||+|
T Consensus       144 ~~g~rVLDl~~gtG~~s---~~~a~-g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~~i~~d~~~~~~~~~~~~~~fD~V  219 (318)
T d1wxxa2         144 FRGERALDVFSYAGGFA---LHLAL-GFREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLV  219 (318)
T ss_dssp             CCEEEEEEETCTTTHHH---HHHHH-HEEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred             hCCCeeeccCCCCcHHH---HHHHh-cCCcEEeecchHHHHHHHHHHHHHcCCCCcceeeccHHHHhhhhHhhhcCCCEE
Confidence            47899998865  4444   44554 355999999999987777653   3432  23333333444433   3479999


Q ss_pred             EEcCC-----CC----------CChHHHHhccccCCeEEEEccC
Q 018382          249 IDTVP-----AN----------HPLEPYLSLLKLDGKLILTGVI  277 (357)
Q Consensus       249 ~d~~g-----~~----------~~~~~~~~~l~~~G~~v~~g~~  277 (357)
                      +--..     ..          ..+..+.++|+|+|.++.....
T Consensus       220 i~DpP~~~~~~~~~~~~~~~~~~l~~~a~~lLkpGG~Lv~~scs  263 (318)
T d1wxxa2         220 VLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCS  263 (318)
T ss_dssp             EECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred             EEcCCccccchHHHHHHHHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence            74221     11          1344677889999999877553

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=91.36  E-value=0.36  Score=40.01  Aligned_cols=34  Identities=15%  Similarity=0.242  Sum_probs=31.0

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeC
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISS  212 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~  212 (357)
                      -.|.+|+|.|.|.+|..+++.+...|++|++++.
T Consensus        34 L~gktvaIqGfGnVG~~~A~~L~e~Gakvv~vsD   67 (293)
T d1hwxa1          34 FGDKTFAVQGFGNVGLHSMRYLHRFGAKCVAVGE   67 (293)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEc
Confidence            3678999999999999999999999999998874

>d2frna1 c.66.1.47 (A:19-278) Hypothetical protein PH0793 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Met-10+ protein-like
domain: Hypothetical protein PH0793
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=91.35  E-value=0.082  Score=43.57  Aligned_cols=95  Identities=15%  Similarity=0.044  Sum_probs=57.5

Q ss_pred             CCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc---CC---cEEEcCCChhHHHHhhCCccEEE-
Q 018382          177 LKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL---GA---DQYLVSSDATRMQEAADSLDYII-  249 (357)
Q Consensus       177 ~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~---g~---~~vv~~~~~~~~~~~~~~~d~v~-  249 (357)
                      .+++|++||-+||| +|..++.+|+.-+++|++++.+++..+.+++..   |.   -.++..+..+..  ..+.+|.|+ 
T Consensus       104 ~~~~g~~VlD~~aG-~G~~~l~~a~~~~~~V~avd~n~~a~~~~~~N~~~n~l~~~v~~~~~D~~~~~--~~~~~D~Ii~  180 (260)
T d2frna1         104 VAKPDELVVDMFAG-IGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFP--GENIADRILM  180 (260)
T ss_dssp             HCCTTCEEEETTCT-TTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCC--CCSCEEEEEE
T ss_pred             hcCCccEEEECcce-EcHHHHHHHHhCCcEEEEecCCHHHHHHHHHHHHHhCCCceEEEEEcchHHhc--cCCCCCEEEE
Confidence            34799999998653 233444556654469999999998877776532   32   233333221111  113588665 


Q ss_pred             EcC-CCCCChHHHHhccccCCeEEEE
Q 018382          250 DTV-PANHPLEPYLSLLKLDGKLILT  274 (357)
Q Consensus       250 d~~-g~~~~~~~~~~~l~~~G~~v~~  274 (357)
                      +.. .....+..+++.++++|.+...
T Consensus       181 ~~p~~~~~~l~~a~~~l~~gG~lh~~  206 (260)
T d2frna1         181 GYVVRTHEFIPKALSIAKDGAIIHYH  206 (260)
T ss_dssp             CCCSSGGGGHHHHHHHEEEEEEEEEE
T ss_pred             CCCCchHHHHHHHHhhcCCCCEEEEE
Confidence            322 2233567789999999987544

>d1omoa_ c.2.1.13 (A:) Archaeal alanine dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Archaeal alanine dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=91.22  E-value=0.46  Score=40.14  Aligned_cols=98  Identities=13%  Similarity=0.158  Sum_probs=65.3

Q ss_pred             hccCCCCCCCeEEEEecChHHHHHHHHHHH-cCC-eEEEEeCCcHHHHHHHHh---cCCcEEEcCCChhHHHHhhCCccE
Q 018382          173 SHFGLKQSGLRGGILGLGGVGHMGVLIAKA-MGH-HVTVISSSDKKRVEAMEH---LGADQYLVSSDATRMQEAADSLDY  247 (357)
Q Consensus       173 ~~~~~~~~~~~VlI~G~g~~G~~ai~la~~-~g~-~V~~~~~~~~~~~~~~~~---~g~~~vv~~~~~~~~~~~~~~~d~  247 (357)
                      +.+.+ +..+++.|+|+|..+.+.++.+.. ... +|.+..+++++.+.+.+.   .+.....+  .    .+...+.|+
T Consensus       118 ~~la~-~~~~~l~iiGaG~QA~~~~~al~~~~~i~~i~v~~r~~e~~~~~~~~~~~~~~~~~~~--~----~~a~~~aDi  190 (320)
T d1omoa_         118 KYLAR-KNSSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRGISASVQ--P----AEEASRCDV  190 (320)
T ss_dssp             HHHSC-TTCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTTCCEEEC--C----HHHHTSSSE
T ss_pred             HHhcc-CCccEEEEecCcccHHHHHHHHHHHhhhhhcccccCCHHHHHHHHHHHHhcCCccccc--h----hhhhccccE
Confidence            34444 455788899999999887777764 455 899999998876655442   33333322  1    123357999


Q ss_pred             EEEcCCCCCChHHHHhccccCCeEEEEccCC
Q 018382          248 IIDTVPANHPLEPYLSLLKLDGKLILTGVIN  278 (357)
Q Consensus       248 v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~  278 (357)
                      |+.++.+...+- -.+.++++-.+..+|...
T Consensus       191 V~taT~s~~P~~-~~~~l~~G~hv~~iGs~~  220 (320)
T d1omoa_         191 LVTTTPSRKPVV-KAEWVEEGTHINAIGADG  220 (320)
T ss_dssp             EEECCCCSSCCB-CGGGCCTTCEEEECSCCS
T ss_pred             EEEeccCccccc-chhhcCCCCeEeecCCcc
Confidence            999887753332 235688888888888754

>d2ex4a1 c.66.1.42 (A:2-224) Adrenal gland protein AD-003 (C9orf32) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Adrenal gland protein AD-003 (C9orf32)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.97  E-value=0.19  Score=40.01  Aligned_cols=96  Identities=17%  Similarity=0.150  Sum_probs=61.9

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCC---c--EEEcCCChhHHHHhhCCccEEEEcCC
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGA---D--QYLVSSDATRMQEAADSLDYIIDTVP  253 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~---~--~vv~~~~~~~~~~~~~~~d~v~d~~g  253 (357)
                      .++.+||-+|+|. |..+..+++..+.+|++++.+++-.+.+++.+..   .  ..+..+-.+ +....+.+|+|+....
T Consensus        59 ~~~~~vLDiGcG~-G~~~~~l~~~~~~~v~~vD~s~~~l~~ak~~~~~~~~~~~~f~~~d~~~-~~~~~~~fD~I~~~~~  136 (222)
T d2ex4a1          59 TGTSCALDCGAGI-GRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQD-FTPEPDSYDVIWIQWV  136 (222)
T ss_dssp             CCCSEEEEETCTT-THHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGG-CCCCSSCEEEEEEESC
T ss_pred             CCCCEEEEeccCC-CHhhHHHHHhcCCEEEEeecCHHHhhccccccccccccccccccccccc-cccccccccccccccc
Confidence            6678899998853 6667777766667999999999888888774432   1  122221111 1112347899986322


Q ss_pred             C-----C---CChHHHHhccccCCeEEEEcc
Q 018382          254 A-----N---HPLEPYLSLLKLDGKLILTGV  276 (357)
Q Consensus       254 ~-----~---~~~~~~~~~l~~~G~~v~~g~  276 (357)
                      -     .   ..+..+.+.|+++|.++....
T Consensus       137 l~h~~~~~~~~~l~~i~~~Lk~~G~~~i~~~  167 (222)
T d2ex4a1         137 IGHLTDQHLAEFLRRCKGSLRPNGIIVIKDN  167 (222)
T ss_dssp             GGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             cccchhhhhhhHHHHHHHhcCCcceEEEEEc
Confidence            1     1   245667888999999987644

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=90.95  E-value=0.13  Score=43.56  Aligned_cols=34  Identities=26%  Similarity=0.251  Sum_probs=30.4

Q ss_pred             CCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCc
Q 018382          181 GLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSD  214 (357)
Q Consensus       181 ~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~  214 (357)
                      .++|+|+|||..|+.++..+...|.+|.++..++
T Consensus         2 ~KKI~IIGaG~sGL~aA~~L~k~G~~V~viEk~~   35 (314)
T d2bi7a1           2 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRD   35 (314)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CCEEEEECCcHHHHHHHHHHHhCCCCEEEEECCC
Confidence            5789999999999999999988899999998653

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=90.89  E-value=0.69  Score=37.20  Aligned_cols=32  Identities=28%  Similarity=0.442  Sum_probs=28.0

Q ss_pred             CCCeEEEEecChHHHHHHHHHHHcCC-eEEEEe
Q 018382          180 SGLRGGILGLGGVGHMGVLIAKAMGH-HVTVIS  211 (357)
Q Consensus       180 ~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~  211 (357)
                      ...+|+|+|+|++|..++..+...|. ++++++
T Consensus        29 ~~~~VliiG~GglGs~va~~La~~Gvg~i~lvD   61 (247)
T d1jw9b_          29 KDSRVLIVGLGGLGCAASQYLASAGVGNLTLLD   61 (247)
T ss_dssp             HHCEEEEECCSHHHHHHHHHHHHHTCSEEEEEC
T ss_pred             hCCCEEEECCCHHHHHHHHHHHHcCCCeEEEEC
Confidence            34789999999999999999999999 777766

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=90.83  E-value=0.12  Score=42.26  Aligned_cols=32  Identities=31%  Similarity=0.226  Sum_probs=28.3

Q ss_pred             eEEEEecChHHHHHHHHHHHcCC-eEEEEeCCc
Q 018382          183 RGGILGLGGVGHMGVLIAKAMGH-HVTVISSSD  214 (357)
Q Consensus       183 ~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~  214 (357)
                      .|+|+|+|+.|++++.+++..|. +|.++.+++
T Consensus         3 ~V~IvGaG~aGl~~A~~L~~~Gi~~V~V~Er~~   35 (288)
T d3c96a1           3 DILIAGAGIGGLSCALALHQAGIGKVTLLESSS   35 (288)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCSEEEEEESSS
T ss_pred             EEEEECcCHHHHHHHHHHHhCCCCeEEEEeCCC
Confidence            58999999999999999999997 888887754

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=90.81  E-value=1.1  Score=35.70  Aligned_cols=42  Identities=21%  Similarity=0.518  Sum_probs=32.8

Q ss_pred             hhhccCCCCCCCeEEEEecChHHHHHHHHH-HHcCCeEEEEeC
Q 018382          171 PLSHFGLKQSGLRGGILGLGGVGHMGVLIA-KAMGHHVTVISS  212 (357)
Q Consensus       171 ~l~~~~~~~~~~~VlI~G~g~~G~~ai~la-~~~g~~V~~~~~  212 (357)
                      ++...+.--++.+|+|.|.|.+|..+++.+ +..|++|+.++.
T Consensus        21 ~~~~~~~~l~g~~vaIqG~GnVG~~~a~~L~~e~Ga~vv~vsd   63 (234)
T d1b26a1          21 AMDVLGIDPKKATVAVQGFGNVGQFAALLISQELGSKVVAVSD   63 (234)
T ss_dssp             HHHHTTCCTTTCEEEEECCSHHHHHHHHHHHHHHCCEEEEEEE
T ss_pred             HHHHcCCCcCCCEEEEECCCHHHHHHHHHHHHhcCCceEEeec
Confidence            344444424689999999999999999987 567999998774

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.77  E-value=0.14  Score=43.14  Aligned_cols=35  Identities=20%  Similarity=0.244  Sum_probs=31.1

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCC
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSS  213 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~  213 (357)
                      ++..+|+|+|+|..|+.++..+...|.+|++...+
T Consensus         3 ~~~~kViVIGaG~aGL~aA~~L~~~G~~V~VlEa~   37 (449)
T d2dw4a2           3 KKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEAR   37 (449)
T ss_dssp             SCCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             CCCCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCC
Confidence            45677999999999999999999999999998764

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=90.72  E-value=0.68  Score=38.93  Aligned_cols=97  Identities=19%  Similarity=0.140  Sum_probs=60.6

Q ss_pred             CCCCCCeEEEEec--ChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhc---CC---c-EEEcCCChhHHHHhh---C
Q 018382          177 LKQSGLRGGILGL--GGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHL---GA---D-QYLVSSDATRMQEAA---D  243 (357)
Q Consensus       177 ~~~~~~~VlI~G~--g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~---g~---~-~vv~~~~~~~~~~~~---~  243 (357)
                      .+.+|++||=+.+  |+.+++   .+ ..|+ +|+.++.++...+.+++++   |.   . .++..+..++++...   .
T Consensus       141 ~~~~g~~VLdlf~~~G~~sl~---aa-~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~~d~~~~l~~~~~~~~  216 (317)
T d2b78a2         141 GSAAGKTVLNLFSYTAAFSVA---AA-MGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHL  216 (317)
T ss_dssp             TTTBTCEEEEETCTTTHHHHH---HH-HTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTC
T ss_pred             HhhCCCceeecCCCCcHHHHH---HH-hCCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEEEccHHHHHHHHHhhcC
Confidence            3468999998843  666543   22 3577 7999999988877776644   21   1 234443345555442   3


Q ss_pred             CccEEEEcCCC-----C----------CChHHHHhccccCCeEEEEccC
Q 018382          244 SLDYIIDTVPA-----N----------HPLEPYLSLLKLDGKLILTGVI  277 (357)
Q Consensus       244 ~~d~v~d~~g~-----~----------~~~~~~~~~l~~~G~~v~~g~~  277 (357)
                      .||+|+--...     .          .++..++++|+|+|.++.....
T Consensus       217 ~fD~Ii~DPP~f~~~~~~~~~~~~~~~~L~~~a~~ll~pgG~l~~~scs  265 (317)
T d2b78a2         217 TYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNA  265 (317)
T ss_dssp             CEEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred             CCCEEEEcChhhccchhHHHHHHHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence            69999632111     0          1445678899999999876553

>d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: mRNA cap (Guanine N-7) methyltransferase
domain: mRNA cap (Guanine N-7) methyltransferase
species: Fungus (Encephalitozoon cuniculi) [TaxId: 6035]

Probab=90.68  E-value=0.14  Score=41.70  Aligned_cols=95  Identities=15%  Similarity=0.060  Sum_probs=57.5

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc---CCc-EE-EcCCChhHH-HHhhCCccEEEEcC
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL---GAD-QY-LVSSDATRM-QEAADSLDYIIDTV  252 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~---g~~-~v-v~~~~~~~~-~~~~~~~d~v~d~~  252 (357)
                      +++++||=+|+|. |..+..+++.-..+|++++.+++..+.+++++   +.. .+ +-..+.... ....+.+|+|+-..
T Consensus        23 ~~~~~VLDlGCG~-G~~~~~~~~~~~~~v~GiD~S~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~~~fD~V~~~~  101 (252)
T d1ri5a_          23 KRGDSVLDLGCGK-GGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQF  101 (252)
T ss_dssp             CTTCEEEEETCTT-TTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEES
T ss_pred             CCcCEEEEecccC-cHHHHHHHHcCCCeEEEecCCHHHHHHHHHHHHhcCCCcceEEEEcchhhhcccccccceEEEEcc
Confidence            6899999999864 55566777664458999999999887776533   221 21 111110000 01123699997543


Q ss_pred             CCC----------CChHHHHhccccCCeEEEE
Q 018382          253 PAN----------HPLEPYLSLLKLDGKLILT  274 (357)
Q Consensus       253 g~~----------~~~~~~~~~l~~~G~~v~~  274 (357)
                      .-.          ..+..+.+.|+|+|.++..
T Consensus       102 ~l~~~~~~~~~~~~~l~~i~~~Lk~gG~~i~~  133 (252)
T d1ri5a_         102 SFHYAFSTSESLDIAQRNIARHLRPGGYFIMT  133 (252)
T ss_dssp             CGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred             eeeecCCCHHHHHHHHHHHhceeCCCCEEEEE
Confidence            221          1234566789999998754

>d1rm4a1 c.2.1.3 (A:1-148,A:313-333) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Spinach (Spinacia oleracea) [TaxId: 3562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Spinach (Spinacia oleracea) [TaxId: 3562]

Probab=90.68  E-value=0.64  Score=35.25  Aligned_cols=95  Identities=15%  Similarity=0.140  Sum_probs=57.0

Q ss_pred             eEEEEecChHHHHHHHHHHHcC---CeEEEEeCCc--HHHHHHHHhcC-------C-------cE-EE--------cCCC
Q 018382          183 RGGILGLGGVGHMGVLIAKAMG---HHVTVISSSD--KKRVEAMEHLG-------A-------DQ-YL--------VSSD  234 (357)
Q Consensus       183 ~VlI~G~g~~G~~ai~la~~~g---~~V~~~~~~~--~~~~~~~~~~g-------~-------~~-vv--------~~~~  234 (357)
                      +|.|.|-|-+|.++.+.+....   .+|+++-...  +....+.+ +-       .       .. ++        +.++
T Consensus         2 kIgINGfGRIGR~v~R~~~~~~~~~i~ivaINd~~~~~~~ayLlk-yDSvhG~~~~~i~~~~~~~~~ing~~I~~~~~~~   80 (172)
T d1rm4a1           2 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTGGVKQASHLLK-YDSILGTFDADVKTAGDSAISVDGKVIKVVSDRN   80 (172)
T ss_dssp             EEEEECCSHHHHHHHHHHHHCSSCSEEEEEEECTTCHHHHHHHHH-CCTTTCSCSSCEEECTTSEEEETTEEEEEECCSC
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCCCEEEEEEcCCCCHHHHHHHHh-cCcccccccceeEecCCcceEECCEEEEEecCCC
Confidence            5788899999999998765432   4566654332  22333333 21       1       11 11        1222


Q ss_pred             hhHHHHhhCCccEEEEcCCCCCChHHHHhccccCCeEEEEccCC
Q 018382          235 ATRMQEAADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVIN  278 (357)
Q Consensus       235 ~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~  278 (357)
                      ++.+.+...++|+|+||+|.......+...+..+-+-|.+..+.
T Consensus        81 p~~i~W~~~gvDiViEcTG~f~~~~~~~~hl~~GakkViiSAP~  124 (172)
T d1rm4a1          81 PVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLITAPG  124 (172)
T ss_dssp             GGGSCHHHHTCCEEEECSSSCCBHHHHHHHHHTTCSCEEESSCC
T ss_pred             hHHCChhhcCCCEEEecCceEccHHHHHHHHhcCCceEEeeccc
Confidence            33333333489999999999756777778888876556665543

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=90.53  E-value=0.11  Score=40.93  Aligned_cols=67  Identities=12%  Similarity=-0.056  Sum_probs=42.2

Q ss_pred             CeEEEEec-ChHHHHHHHHHHHcCC--eEEEEeCCcHHHHHHHHhcCCcEEEcCCC-hhHHHHhhCCccEEEEcCCCC
Q 018382          182 LRGGILGL-GGVGHMGVLIAKAMGH--HVTVISSSDKKRVEAMEHLGADQYLVSSD-ATRMQEAADSLDYIIDTVPAN  255 (357)
Q Consensus       182 ~~VlI~G~-g~~G~~ai~la~~~g~--~V~~~~~~~~~~~~~~~~~g~~~vv~~~~-~~~~~~~~~~~d~v~d~~g~~  255 (357)
                      ++|||+|+ |.+|...+..+...|.  +|++..+++..       .......+..+ .+....+...+|.|+.|+|..
T Consensus         3 KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~-------~~~~~~~~~~d~~~~~~~~~~~~d~vi~~~g~~   73 (212)
T d2a35a1           3 KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA-------EHPRLDNPVGPLAELLPQLDGSIDTAFCCLGTT   73 (212)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC-------CCTTEECCBSCHHHHGGGCCSCCSEEEECCCCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchh-------hcccccccccchhhhhhccccchheeeeeeeee
Confidence            68999998 9999999998888886  66666654211       00111111222 222333345789999998764

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=90.38  E-value=0.4  Score=34.89  Aligned_cols=74  Identities=20%  Similarity=0.208  Sum_probs=45.8

Q ss_pred             eEEEEec-ChHHHHHHHHHHHc-CCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCCChHH
Q 018382          183 RGGILGL-GGVGHMGVLIAKAM-GHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEP  260 (357)
Q Consensus       183 ~VlI~G~-g~~G~~ai~la~~~-g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~  260 (357)
                      +|.|.|+ |-+|.+.++..... +.+++......+....                    ....++|+++|.+... ....
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~~~~~--------------------~~~~~~DvvIDFS~p~-~~~~   59 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDPLSL--------------------LTDGNTEVVIDFTHPD-VVMG   59 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTCCTHH--------------------HHTTTCSEEEECCCTT-THHH
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCchhh--------------------hccccCCEEEEcccHH-HHHH
Confidence            5889997 99999988887654 5677665432111111                    1123678888877766 5555


Q ss_pred             HHhccccCCeEEEEccC
Q 018382          261 YLSLLKLDGKLILTGVI  277 (357)
Q Consensus       261 ~~~~l~~~G~~v~~g~~  277 (357)
                      .++.+...|.=+.+|.+
T Consensus        60 ~~~~~~~~~~~~ViGTT   76 (135)
T d1yl7a1          60 NLEFLIDNGIHAVVGTT   76 (135)
T ss_dssp             HHHHHHHTTCEEEECCC
T ss_pred             HHHHHHhcCCCEEEecc
Confidence            55555566655555554

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=90.20  E-value=1.4  Score=32.11  Aligned_cols=70  Identities=16%  Similarity=0.195  Sum_probs=44.8

Q ss_pred             CeEEEEecChHHHHHHHHHHHcCC--eEEEEeCCcHHHHHH-H--H----hcCCcEEEcCCChhHHHHhhCCccEEEEcC
Q 018382          182 LRGGILGLGGVGHMGVLIAKAMGH--HVTVISSSDKKRVEA-M--E----HLGADQYLVSSDATRMQEAADSLDYIIDTV  252 (357)
Q Consensus       182 ~~VlI~G~g~~G~~ai~la~~~g~--~V~~~~~~~~~~~~~-~--~----~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~  252 (357)
                      .+|.|+|+|.+|..++..+...+.  +++.++.++++.+.. .  +    ..+...+....+.    +...+.|+|+-++
T Consensus         2 ~Ki~IIGaG~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~~~~----~~~~daDvVVita   77 (143)
T d1llda1           2 TKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDDP----EICRDADMVVITA   77 (143)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESCG----GGGTTCSEEEECC
T ss_pred             CEEEEECCCHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecCCCH----HHhhCCcEEEEec
Confidence            358888999999998888877775  788888877654321 1  1    1122233222221    1234689999998


Q ss_pred             CCC
Q 018382          253 PAN  255 (357)
Q Consensus       253 g~~  255 (357)
                      |..
T Consensus        78 G~~   80 (143)
T d1llda1          78 GPR   80 (143)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            875

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=89.93  E-value=0.27  Score=36.50  Aligned_cols=71  Identities=17%  Similarity=0.141  Sum_probs=47.3

Q ss_pred             eEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCCChHH
Q 018382          183 RGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEP  260 (357)
Q Consensus       183 ~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~  260 (357)
                      +|-|+|.|.+|.+++.-+...|.+|++..+...+...... .+.... +.     ..+.....|+||-|+........
T Consensus         2 kIgiIG~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~-~~~~~~-~~-----~~e~~~~~diIi~~v~~~~~~~~   72 (152)
T d1i36a2           2 RVGFIGFGEVAQTLASRLRSRGVEVVTSLEGRSPSTIERA-RTVGVT-ET-----SEEDVYSCPVVISAVTPGVALGA   72 (152)
T ss_dssp             EEEEESCSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHH-HHHTCE-EC-----CHHHHHTSSEEEECSCGGGHHHH
T ss_pred             EEEEEcHHHHHHHHHHHHHHCCCeEEEEcCchhHHHHHhh-hccccc-cc-----HHHHHhhcCeEEEEecCchHHHH
Confidence            5778899999999999999899999888766655444333 232211 11     12344568888888877633333

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=89.70  E-value=0.15  Score=41.10  Aligned_cols=31  Identities=16%  Similarity=0.223  Sum_probs=27.6

Q ss_pred             eEEEEecChHHHHHHHHHHHcCC-eEEEEeCC
Q 018382          183 RGGILGLGGVGHMGVLIAKAMGH-HVTVISSS  213 (357)
Q Consensus       183 ~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~  213 (357)
                      .|+|+|+|..|+.++..++..|. +|+++.++
T Consensus         2 ~V~IIGaG~aGL~aA~~L~~~G~~~V~vlE~~   33 (347)
T d1b5qa1           2 RVIVVGAGMSGISAAKRLSEAGITDLLILEAT   33 (347)
T ss_dssp             CEEEECCBHHHHHHHHHHHHTTCCCEEEECSS
T ss_pred             CEEEECCcHHHHHHHHHHHhCCCCcEEEEECC
Confidence            58999999999999999988997 69998865

>d3cmco1 c.2.1.3 (O:0-148,O:313-333) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Bacillus stearothermophilus, nca 1503 [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Bacillus stearothermophilus, nca 1503 [TaxId: 1422]

Probab=89.54  E-value=0.73  Score=34.87  Aligned_cols=95  Identities=13%  Similarity=0.154  Sum_probs=58.3

Q ss_pred             eEEEEecChHHHHHHHHHHHc-CCeEEEEeCCc--HHHHHHHHhcCC-------c------E---------EEcCCChhH
Q 018382          183 RGGILGLGGVGHMGVLIAKAM-GHHVTVISSSD--KKRVEAMEHLGA-------D------Q---------YLVSSDATR  237 (357)
Q Consensus       183 ~VlI~G~g~~G~~ai~la~~~-g~~V~~~~~~~--~~~~~~~~~~g~-------~------~---------vv~~~~~~~  237 (357)
                      +|.|.|-|-+|..+.+.+-.. ..+++++-...  +....+.+ +..       +      .         +...++++.
T Consensus         3 kIgINGfGRIGR~v~R~~l~~~~~~ivaINd~~d~~~~ayll~-yDS~hG~~~~~v~~~~~~l~i~g~~i~i~~~~~p~~   81 (171)
T d3cmco1           3 KVGINGFGRIGRNVFRAALKNPDIEVVAVNDLTDANTLAHLLK-YDSVHGRLDAEVSVNGNNLVVNGKEIIVKAERDPEN   81 (171)
T ss_dssp             EEEEESCSHHHHHHHHHHTTCTTEEEEEEECSSCHHHHHHHHH-EETTTEECSSCEEEETTEEEETTEEEEEECCSSGGG
T ss_pred             EEEEECCCHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHhhhhc-ccccCCcccccccccCCCEEeCCcceeeEecCCHHH
Confidence            577889999999988877544 34666664322  23334443 211       0      0         112222333


Q ss_pred             HHHhhCCccEEEEcCCCCCChHHHHhccccCCeEEEEccCC
Q 018382          238 MQEAADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVIN  278 (357)
Q Consensus       238 ~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~  278 (357)
                      +.+-.-++|+|+||+|.....+.+...+..+-+-|.+..+.
T Consensus        82 i~W~~~~vDiViEcTG~f~t~~~~~~hl~~gakkViiSap~  122 (171)
T d3cmco1          82 LAWGEIGVDIVVESTGRFTKREDAAKHLEAGAKKVIISAPA  122 (171)
T ss_dssp             CCTGGGTCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSCC
T ss_pred             ccccccCCcEEEEecCccCCHHHHHHHHhCCCceEEEeccc
Confidence            33333479999999999866777888888876666665543

>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Escherichia coli [TaxId: 562]

Probab=89.47  E-value=0.085  Score=40.92  Aligned_cols=35  Identities=20%  Similarity=0.178  Sum_probs=30.4

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCC
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSS  213 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~  213 (357)
                      +++..|+|+|+|+.|+.++..+...|.+|+++.+.
T Consensus         3 ~k~~dVvIIGGGpaGl~AA~~~ar~g~~v~iie~~   37 (190)
T d1trba1           3 TKHSKLLILGSGPAGYTAAVYAARANLQPVLITGM   37 (190)
T ss_dssp             EEEEEEEEECCSHHHHHHHHHHHTTTCCCEEECCS
T ss_pred             CCCCcEEEECCCHHHHHHHHHHHHcCCceEEEEee
Confidence            34567999999999999999999999999998754

>d2bhsa1 c.79.1.1 (A:2-293) O-acetylserine sulfhydrylase (Cysteine synthase) {Escherichia coli, isoform B (CysM) [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Escherichia coli, isoform B (CysM) [TaxId: 562]

Probab=89.47  E-value=1.5  Score=35.99  Aligned_cols=101  Identities=14%  Similarity=0.145  Sum_probs=62.0

Q ss_pred             cCCCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeC---CcHHHHHHHHhcCCcEEEcCCCh----------------
Q 018382          175 FGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISS---SDKKRVEAMEHLGADQYLVSSDA----------------  235 (357)
Q Consensus       175 ~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~---~~~~~~~~~~~~g~~~vv~~~~~----------------  235 (357)
                      .+.++++..|+.-.+|..|++++..++.+|.+++++.+   ++.+.+.++. +|++-++...+.                
T Consensus        54 ~g~~~~~~~vv~aSsGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~~-~GA~v~~v~~~~~~~~a~~~~~~~~~~~  132 (292)
T d2bhsa1          54 RGEIKPGDVLIEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERRAAMRA-YGAELILVTKEQGMEGARDLALEMANRG  132 (292)
T ss_dssp             TTSCCTTSEEEEECCSHHHHHHHHHHHHHTCEEEEEEESCCCHHHHHHHHH-TTCEEEEECTTTHHHHHHHHHHHHHHHT
T ss_pred             hCCcCCCceeeeecccchhHHHHHHHHhcCcceEeeeccCchhhhhHHHHH-hCCCcceeecccchHHHHHHHhhccccc
Confidence            34435555544446799999999999999997666654   3345555555 998654311110                


Q ss_pred             -----------h------------HHHHhhCCccEEEEcCCCCCChH---HHHhccccCCeEEEEcc
Q 018382          236 -----------T------------RMQEAADSLDYIIDTVPANHPLE---PYLSLLKLDGKLILTGV  276 (357)
Q Consensus       236 -----------~------------~~~~~~~~~d~v~d~~g~~~~~~---~~~~~l~~~G~~v~~g~  276 (357)
                                 .            .++++.+.+|+++-++|+...+.   ..++...+..+++.+..
T Consensus       133 ~~~~~~~~~~~~~~~~~~~~~a~Ei~~q~~~~~d~vv~~~G~Gg~~~G~~~~~k~~~~~~~i~~Vep  199 (292)
T d2bhsa1         133 EGKLLDQFNNPDNPYAHYTTTGPEIWQQTGGRITHFVSSMGTTGTITGVSRFMREQSKPVTIVGLQP  199 (292)
T ss_dssp             SSEECCTTTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHTSSSCCEEEEEEE
T ss_pred             cccccCCCchhcchhhHHHHHHHHhHHhcCCCCCcccccCCCccchhhhhhhhhhccCcceEEEecc
Confidence                       0            11112225899999998875444   34455667777776643

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=89.27  E-value=0.17  Score=38.62  Aligned_cols=32  Identities=19%  Similarity=0.065  Sum_probs=27.4

Q ss_pred             CCCeEEEEecChHHHHHHHHHHHcCCeEEEEe
Q 018382          180 SGLRGGILGLGGVGHMGVLIAKAMGHHVTVIS  211 (357)
Q Consensus       180 ~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~  211 (357)
                      ++++|+|+|+|.+|+-++..++..|.+|.++.
T Consensus         2 ~~~~VvIIGgG~~G~e~A~~l~~~g~~v~v~~   33 (185)
T d1q1ra1           2 ANDNVVIVGTGLAGVEVAFGLRASGWEGNIRL   33 (185)
T ss_dssp             CSCEEEEECCSHHHHHHHHHHHHTTCCSEEEE
T ss_pred             CCCCEEEECCcHHHHHHHHHHHHcCCceEEEE
Confidence            57899999999999999999999998655544

>d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains
species: Escherichia coli [TaxId: 562]

Probab=89.27  E-value=0.17  Score=38.59  Aligned_cols=30  Identities=17%  Similarity=0.254  Sum_probs=27.3

Q ss_pred             eEEEEecChHHHHHHHHHHHcCCeEEEEeC
Q 018382          183 RGGILGLGGVGHMGVLIAKAMGHHVTVISS  212 (357)
Q Consensus       183 ~VlI~G~g~~G~~ai~la~~~g~~V~~~~~  212 (357)
                      -|+|+|+|+.|+.++..+...|.+|.++.+
T Consensus         3 DViIIGgGpaGl~AAi~aar~G~~v~iie~   32 (184)
T d1fl2a1           3 DVLIVGSGPAGAAAAIYSARKGIRTGLMGE   32 (184)
T ss_dssp             EEEEECCSHHHHHHHHHHHTTTCCEEEECS
T ss_pred             cEEEECcCHHHHHHHHHHHHcCCeEEEEEE
Confidence            378999999999999999999999999875

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=89.26  E-value=0.18  Score=40.58  Aligned_cols=32  Identities=25%  Similarity=0.338  Sum_probs=28.1

Q ss_pred             EEEEecChHHHHHHHHHHHcCCeEEEEeCCcH
Q 018382          184 GGILGLGGVGHMGVLIAKAMGHHVTVISSSDK  215 (357)
Q Consensus       184 VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~  215 (357)
                      |+|+|+|+.|++++..+...|.+|+++.+++.
T Consensus         5 ViIIGaG~aGl~aA~~la~~G~~V~liEk~~~   36 (251)
T d2i0za1           5 VIVIGGGPSGLMAAIGAAEEGANVLLLDKGNK   36 (251)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             EEEECcCHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            78999999999988888888999999987643

>d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: BC2162-like
domain: Methyltransferase BC2162
species: Bacillus cereus [TaxId: 1396]

Probab=89.24  E-value=0.32  Score=40.23  Aligned_cols=97  Identities=25%  Similarity=0.258  Sum_probs=62.9

Q ss_pred             CCCCCCeEEEEecChHHHHHHHHHHHc--CCeEEEEeCCcHHHHHHHHhc---CCcEEEcCCChhHHHHhhCCccEEEEc
Q 018382          177 LKQSGLRGGILGLGGVGHMGVLIAKAM--GHHVTVISSSDKKRVEAMEHL---GADQYLVSSDATRMQEAADSLDYIIDT  251 (357)
Q Consensus       177 ~~~~~~~VlI~G~g~~G~~ai~la~~~--g~~V~~~~~~~~~~~~~~~~~---g~~~vv~~~~~~~~~~~~~~~d~v~d~  251 (357)
                      .+.+..+||=+|+| .|..+..+++..  +.+|++++.+++..+.+++.+   +.+..+...+...+ ...+.+|+|+..
T Consensus        24 ~~~~~~~ILDiGcG-~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~f~~~d~~~~-~~~~~fD~v~~~  101 (281)
T d2gh1a1          24 KITKPVHIVDYGCG-YGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEI-ELNDKYDIAICH  101 (281)
T ss_dssp             CCCSCCEEEEETCT-TTHHHHHHTTTSCTTCEEEEEECCHHHHHHHHHHHHSSSSEEEEEESCTTTC-CCSSCEEEEEEE
T ss_pred             ccCCcCEEEEecCc-CCHHHHHHHHhCCCCCEEEEEecchhHhhhhhcccccccccccccccccccc-cccCCceEEEEe
Confidence            34567789888986 477788888865  468999999988777766533   33222222221111 123479999864


Q ss_pred             CCC------CCChHHHHhccccCCeEEEEc
Q 018382          252 VPA------NHPLEPYLSLLKLDGKLILTG  275 (357)
Q Consensus       252 ~g~------~~~~~~~~~~l~~~G~~v~~g  275 (357)
                      ..-      ...++.+.+.|+|+|.++...
T Consensus       102 ~~l~~~~d~~~~l~~~~~~LkpgG~lii~~  131 (281)
T d2gh1a1         102 AFLLHMTTPETMLQKMIHSVKKGGKIICFE  131 (281)
T ss_dssp             SCGGGCSSHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             hhhhcCCCHHHHHHHHHHHcCcCcEEEEEE
Confidence            321      124677889999999988764

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=89.18  E-value=0.14  Score=39.58  Aligned_cols=93  Identities=13%  Similarity=0.057  Sum_probs=54.2

Q ss_pred             eEEEEec-ChHHHHHHHHHHHcC-CeEEEEeCCcHHHHHHHHhcCCcEEEcCC-ChhHHHHhhCCccEEEEcCCCCCChH
Q 018382          183 RGGILGL-GGVGHMGVLIAKAMG-HHVTVISSSDKKRVEAMEHLGADQYLVSS-DATRMQEAADSLDYIIDTVPANHPLE  259 (357)
Q Consensus       183 ~VlI~G~-g~~G~~ai~la~~~g-~~V~~~~~~~~~~~~~~~~~g~~~vv~~~-~~~~~~~~~~~~d~v~d~~g~~~~~~  259 (357)
                      +|.|+|+ |-+|+-+++++...- .++..+.++...-..+.+.+......+.. ..........+.|++|.+.+.. ...
T Consensus         7 kVaIlGATGyvG~elirLL~~HP~~ei~~l~S~~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvvf~alp~~-~s~   85 (183)
T d2cvoa1           7 RIAVLGASGYTGAEIVRLLANHPQFRIKVMTADRKAGEQFGSVFPHLITQDLPNLVAVKDADFSNVDAVFCCLPHG-TTQ   85 (183)
T ss_dssp             EEEEESCSSHHHHHHHHHHTTCSSEEEEEEECSTTTTSCHHHHCGGGTTSCCCCCBCGGGCCGGGCSEEEECCSSS-HHH
T ss_pred             EEEEECcccHHHHHHHHHHHhCCCceEEEEeccccCCCccccccccccccccccchhhhhhhhcccceeeeccccc-hHH
Confidence            5899998 999999999998764 47666654332211222211100000000 0011112234799999999998 555


Q ss_pred             HHHhccccCCeEEEEcc
Q 018382          260 PYLSLLKLDGKLILTGV  276 (357)
Q Consensus       260 ~~~~~l~~~G~~v~~g~  276 (357)
                      .....+...+.++....
T Consensus        86 ~~~~~l~~~~~~v~~~~  102 (183)
T d2cvoa1          86 EIIKGLPQELKIVDLSA  102 (183)
T ss_dssp             HHHHTSCSSCEEEECSS
T ss_pred             HHHHHHHhcCcccccch
Confidence            66677888888776643

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.11  E-value=0.59  Score=39.49  Aligned_cols=74  Identities=19%  Similarity=0.104  Sum_probs=47.4

Q ss_pred             CeEEEEec-ChHHHHHHHHHHHcCCeEEEEeC----------CcHHHHHHHHhcC-CcEE--EcCCChhHHHHhh--CCc
Q 018382          182 LRGGILGL-GGVGHMGVLIAKAMGHHVTVISS----------SDKKRVEAMEHLG-ADQY--LVSSDATRMQEAA--DSL  245 (357)
Q Consensus       182 ~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~----------~~~~~~~~~~~~g-~~~v--v~~~~~~~~~~~~--~~~  245 (357)
                      ++|||+|+ |-+|..++..+...|.+|+++++          ..+........-. .-.+  .|..+.+.+++..  ..+
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~   82 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYSF   82 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCCE
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeecccccccccccccccc
Confidence            68999987 99999999999888999999853          1122232222111 1222  3445666666543  367


Q ss_pred             cEEEEcCCCC
Q 018382          246 DYIIDTVPAN  255 (357)
Q Consensus       246 d~v~d~~g~~  255 (357)
                      ++++.+++-.
T Consensus        83 ~~i~h~Aa~~   92 (346)
T d1ek6a_          83 MAVIHFAGLK   92 (346)
T ss_dssp             EEEEECCSCC
T ss_pred             cccccccccc
Confidence            7888877643

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=89.06  E-value=0.19  Score=39.92  Aligned_cols=31  Identities=23%  Similarity=0.147  Sum_probs=28.2

Q ss_pred             EEEEecChHHHHHHHHHHHcCCeEEEEeCCc
Q 018382          184 GGILGLGGVGHMGVLIAKAMGHHVTVISSSD  214 (357)
Q Consensus       184 VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~  214 (357)
                      |+|+|+|..|+.++..+...|.+|.++.+++
T Consensus         8 viViGaG~~Gl~~A~~La~~G~~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLGTGITECILSGLLSVDGKKVLHIDKQD   38 (297)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECcCHHHHHHHHHHHHCCCCEEEEcCCC
Confidence            7899999999999999988899999999864

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=89.01  E-value=0.24  Score=35.52  Aligned_cols=83  Identities=18%  Similarity=0.139  Sum_probs=50.8

Q ss_pred             CCCCeEEEEecCh--H---------HHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcC-CcEEE-cCCChhHHHHhhC--
Q 018382          179 QSGLRGGILGLGG--V---------GHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLG-ADQYL-VSSDATRMQEAAD--  243 (357)
Q Consensus       179 ~~~~~VlI~G~g~--~---------G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g-~~~vv-~~~~~~~~~~~~~--  243 (357)
                      ..-++|||+|+|+  +         +..++..++..|.+++.+.++++...--   +. +|+++ ..-..+.+.++..  
T Consensus         5 ~~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVstd---~d~aD~lYfePlt~e~v~~Ii~~E   81 (127)
T d1a9xa3           5 TDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTD---PEMADATYIEPIHWEVVRKIIEKE   81 (127)
T ss_dssp             SSCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGC---GGGSSEEECSCCCHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhcC---hhhcceeeeecCCHHHHHHHHHHh
Confidence            3458899999876  2         3445555566799999999887764221   22 44443 2223455555533  


Q ss_pred             CccEEEEcCCCCCChHHHHhc
Q 018382          244 SLDYIIDTVPANHPLEPYLSL  264 (357)
Q Consensus       244 ~~d~v~d~~g~~~~~~~~~~~  264 (357)
                      ..|.|+-..|+...++.+.++
T Consensus        82 ~pd~il~~~GGQtalnla~~L  102 (127)
T d1a9xa3          82 RPDAVLPTMGGQTALNCALEL  102 (127)
T ss_dssp             CCSEEECSSSHHHHHHHHHHH
T ss_pred             CcCCeEEEeeeehHhHHHHHH
Confidence            788888777776344444444

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=89.01  E-value=2.6  Score=31.23  Aligned_cols=73  Identities=15%  Similarity=0.231  Sum_probs=48.0

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCC--eEEEEeCCcHHHH-HHHH--h----cCCcEEEcCCChhHHHHhhCCccEEE
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGH--HVTVISSSDKKRV-EAME--H----LGADQYLVSSDATRMQEAADSLDYII  249 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~--~V~~~~~~~~~~~-~~~~--~----~g~~~vv~~~~~~~~~~~~~~~d~v~  249 (357)
                      .+..+|.|+|+|.+|...+..+...|.  +++.++.++++.+ ++.+  +    .+...++...+.    +...+.|+|+
T Consensus        18 ~~~~KV~IIGaG~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d~----~~~~~adiVV   93 (160)
T d1i0za1          18 VPNNKITVVGVGQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKDY----SVTANSKIVV   93 (160)
T ss_dssp             CCSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSSG----GGGTTCSEEE
T ss_pred             CCCCeEEEECCCHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccch----hhcccccEEE
Confidence            456789999999999999999988886  7888887766543 2211  1    112222222221    2335799999


Q ss_pred             EcCCCC
Q 018382          250 DTVPAN  255 (357)
Q Consensus       250 d~~g~~  255 (357)
                      -++|..
T Consensus        94 itAg~~   99 (160)
T d1i0za1          94 VTAGVR   99 (160)
T ss_dssp             ECCSCC
T ss_pred             EecCCc
Confidence            888775

>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Arginine methyltransferase, HMT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=88.95  E-value=0.18  Score=42.95  Aligned_cols=90  Identities=20%  Similarity=0.093  Sum_probs=48.5

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHH---HhcCC--c-EEEcCCChhHHHHhhCCccEEEEc
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAM---EHLGA--D-QYLVSSDATRMQEAADSLDYIIDT  251 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~---~~~g~--~-~vv~~~~~~~~~~~~~~~d~v~d~  251 (357)
                      .+|++||-+|+|. |..++.+++ .|+ +|+++..++. ...++   ++.+.  . .++..+..+ +......+|+|+..
T Consensus        37 ~~~~~VLDlGcGt-G~ls~~aa~-~Ga~~V~avd~s~~-~~~a~~~~~~~~~~~~i~~i~~~~~~-l~~~~~~~D~i~se  112 (328)
T d1g6q1_          37 FKDKIVLDVGCGT-GILSMFAAK-HGAKHVIGVDMSSI-IEMAKELVELNGFSDKITLLRGKLED-VHLPFPKVDIIISE  112 (328)
T ss_dssp             HTTCEEEEETCTT-SHHHHHHHH-TCCSEEEEEESSTH-HHHHHHHHHHTTCTTTEEEEESCTTT-SCCSSSCEEEEEEC
T ss_pred             CCcCEEEEeCCCC-CHHHHHHHH-hCCCEEEEEeCCHH-HHHHHHHHHHhCccccceEEEeehhh-ccCcccceeEEEEE
Confidence            5789999998863 555544444 577 8999988753 22222   22342  1 223222111 11112479998753


Q ss_pred             CC-----CCCCh----HHHHhccccCCeEE
Q 018382          252 VP-----ANHPL----EPYLSLLKLDGKLI  272 (357)
Q Consensus       252 ~g-----~~~~~----~~~~~~l~~~G~~v  272 (357)
                      .-     .....    ....+.|+|+|+++
T Consensus       113 ~~~~~~~~e~~~~~~~~a~~r~LkpgG~ii  142 (328)
T d1g6q1_         113 WMGYFLLYESMMDTVLYARDHYLVEGGLIF  142 (328)
T ss_dssp             CCBTTBSTTCCHHHHHHHHHHHEEEEEEEE
T ss_pred             ecceeeccchhHHHHHHHHHhccCCCeEEE
Confidence            21     11122    22346899999885

>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methyltransferase TTHA0928
species: Thermus thermophilus [TaxId: 274]

Probab=88.88  E-value=0.96  Score=34.11  Aligned_cols=91  Identities=15%  Similarity=0.079  Sum_probs=52.5

Q ss_pred             CCCCeEEEEec--ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHH---hcCC-cEEEcCCChhHHHHh---hCCccEEE
Q 018382          179 QSGLRGGILGL--GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAME---HLGA-DQYLVSSDATRMQEA---ADSLDYII  249 (357)
Q Consensus       179 ~~~~~VlI~G~--g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~---~~g~-~~vv~~~~~~~~~~~---~~~~d~v~  249 (357)
                      .+|.+||=+++  |.+|+   ..+ ..|++|+.++.+++..+.+++   ..|. +.+...+........   ...||+||
T Consensus        40 ~~g~~vLDl~~G~G~~~i---~a~-~~ga~vv~vD~~~~a~~~~~~N~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~If  115 (171)
T d1ws6a1          40 PRRGRFLDPFAGSGAVGL---EAA-SEGWEAVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEAKAQGERFTVAF  115 (171)
T ss_dssp             TTCCEEEEETCSSCHHHH---HHH-HTTCEEEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHHHHTTCCEEEEE
T ss_pred             cCCCeEEEeccccchhhh---hhh-hccchhhhcccCHHHHhhhhHHHHhhccccceeeeehhcccccccccCCccceeE
Confidence            67889988854  66554   333 358999999888887665543   3553 345444433332222   24799997


Q ss_pred             EcC----CCCCChHHHH--hccccCCeEEE
Q 018382          250 DTV----PANHPLEPYL--SLLKLDGKLIL  273 (357)
Q Consensus       250 d~~----g~~~~~~~~~--~~l~~~G~~v~  273 (357)
                      --.    +-...+..+.  ..++++|.++.
T Consensus       116 ~DPPY~~~~~~~l~~l~~~~ll~~~g~ivi  145 (171)
T d1ws6a1         116 MAPPYAMDLAALFGELLASGLVEAGGLYVL  145 (171)
T ss_dssp             ECCCTTSCTTHHHHHHHHHTCEEEEEEEEE
T ss_pred             EccccccCHHHHHHHHHHcCCcCCCeEEEE
Confidence            421    2121233332  35788887764

>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein MJ0882
domain: Hypothetical protein MJ0882
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=88.85  E-value=0.17  Score=39.41  Aligned_cols=91  Identities=20%  Similarity=0.160  Sum_probs=55.7

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCC--c--EEEcCCChhHHHHhh-CCccEEEE
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGA--D--QYLVSSDATRMQEAA-DSLDYIID  250 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~--~--~vv~~~~~~~~~~~~-~~~d~v~d  250 (357)
                      .++++||=+|+|. |..++.+++ .+.+|++++-++...+.+++.   .+.  .  .++..+.   .+... +.+|+|+-
T Consensus        51 ~~~~~VLDiGcG~-G~~~~~la~-~~~~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~~~d~---~~~~~~~~fD~Ii~  125 (194)
T d1dusa_          51 DKDDDILDLGCGY-GVIGIALAD-EVKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDL---YENVKDRKYNKIIT  125 (194)
T ss_dssp             CTTCEEEEETCTT-SHHHHHHGG-GSSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECST---TTTCTTSCEEEEEE
T ss_pred             CCCCeEEEEeecC-ChhHHHHHh-hccccceeeeccccchhHHHHHHHhCCccceEEEEEcch---hhhhccCCceEEEE
Confidence            7899999998742 444555555 467999999998877666542   232  1  2222221   11222 47999985


Q ss_pred             cCC----CC---CChHHHHhccccCCeEEEE
Q 018382          251 TVP----AN---HPLEPYLSLLKLDGKLILT  274 (357)
Q Consensus       251 ~~g----~~---~~~~~~~~~l~~~G~~v~~  274 (357)
                      ...    ..   ..++.+.+.|+++|+++..
T Consensus       126 ~~p~~~~~~~~~~~l~~~~~~LkpgG~l~i~  156 (194)
T d1dusa_         126 NPPIRAGKEVLHRIIEEGKELLKDNGEIWVV  156 (194)
T ss_dssp             CCCSTTCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             cccEEecchhhhhHHHHHHHhcCcCcEEEEE
Confidence            322    11   1356677889999987654

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=88.83  E-value=0.11  Score=39.62  Aligned_cols=98  Identities=12%  Similarity=0.060  Sum_probs=63.2

Q ss_pred             CCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHH---hcCCcEEEc--CCChhHHHHhhCCccEEEEcC
Q 018382          179 QSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAME---HLGADQYLV--SSDATRMQEAADSLDYIIDTV  252 (357)
Q Consensus       179 ~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~---~~g~~~vv~--~~~~~~~~~~~~~~d~v~d~~  252 (357)
                      -.|++|+|+|- ..+|.=++.++...|+.|+......... ..+.   ..-...+-+  ...++.+++.....|+++.++
T Consensus        27 l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~lk~~~~~aDIvIsav  105 (171)
T d1edza1          27 LYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQK-FTRGESLKLNKHHVEDLGEYSEDLLKKCSLDSDVVITGV  105 (171)
T ss_dssp             TTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEE-EESCCCSSCCCCEEEEEEECCHHHHHHHHHHCSEEEECC
T ss_pred             CCCCEEEEECCccccHHHHHHHHHHCCCEEEEeccccccc-cccccceeeeeeccccccccchhHHhhccccCCEEEEcc
Confidence            46899999996 6889998899988999998765432110 0000   000111111  122455666666899999999


Q ss_pred             CCCCChHHHHhccccCCeEEEEccCC
Q 018382          253 PANHPLEPYLSLLKLDGKLILTGVIN  278 (357)
Q Consensus       253 g~~~~~~~~~~~l~~~G~~v~~g~~~  278 (357)
                      |.+ .+..-.+.++++-.++++|...
T Consensus       106 G~p-~~~i~~d~ik~GavvIDvGi~~  130 (171)
T d1edza1         106 PSE-NYKFPTEYIKEGAVCINFACTK  130 (171)
T ss_dssp             CCT-TCCBCTTTSCTTEEEEECSSSC
T ss_pred             CCC-ccccChhhcccCceEeeccccc
Confidence            987 3333446788888888988653

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=88.80  E-value=0.19  Score=40.81  Aligned_cols=33  Identities=27%  Similarity=0.411  Sum_probs=29.3

Q ss_pred             eEEEEecChHHHHHHHHHHHcCCeEEEEeCCcH
Q 018382          183 RGGILGLGGVGHMGVLIAKAMGHHVTVISSSDK  215 (357)
Q Consensus       183 ~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~  215 (357)
                      -|+|+|+|+.|++++..+...|.+|.++.+++.
T Consensus         6 DViIIGaG~aGl~aA~~la~~G~~V~vlEk~~~   38 (253)
T d2gqfa1           6 ENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKK   38 (253)
T ss_dssp             SEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             cEEEECcCHHHHHHHHHHHHCCCcEEEEecCCC
Confidence            488999999999999888888999999997754

>d1susa1 c.66.1.1 (A:21-247) Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Caffeoyl-CoA O-methyltransferase
species: Alfalfa (Medicago sativa) [TaxId: 3879]

Probab=88.76  E-value=1.9  Score=34.06  Aligned_cols=95  Identities=14%  Similarity=0.164  Sum_probs=62.5

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHc--CCeEEEEeCCcHHHHHHHHh---cCCc---EEEcCCChhHHHHh------hCC
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAM--GHHVTVISSSDKKRVEAMEH---LGAD---QYLVSSDATRMQEA------ADS  244 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~--g~~V~~~~~~~~~~~~~~~~---~g~~---~vv~~~~~~~~~~~------~~~  244 (357)
                      ...++||=+|.+ +|+.++.+|+.+  +.+|+.+..+++..+.+++.   .|..   .++.....+.+.++      .+.
T Consensus        58 ~~~k~iLEiGT~-~GyStl~la~al~~~g~v~tie~~~~~~~~A~~~~~~~g~~~~i~~~~g~a~~~L~~l~~~~~~~~~  136 (227)
T d1susa1          58 INAKNTMEIGVY-TGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGS  136 (227)
T ss_dssp             HTCCEEEEECCG-GGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCGGGTTC
T ss_pred             cCCCcEEEecch-hhhhHHHHHhhCCCCcEEEEEeccchhHHHHHHHHHHhccccceeeeehHHHHHHHHHHhccccCCc
Confidence            456788888863 477788888776  45999999998876666553   3532   23333334555554      236


Q ss_pred             ccEEEEcCCCC---CChHHHHhccccCCeEEEE
Q 018382          245 LDYIIDTVPAN---HPLEPYLSLLKLDGKLILT  274 (357)
Q Consensus       245 ~d~v~d~~g~~---~~~~~~~~~l~~~G~~v~~  274 (357)
                      ||.||-=....   ..++.++++|+++|.++.=
T Consensus       137 fD~iFiDa~k~~y~~~~e~~~~ll~~gGiii~D  169 (227)
T d1susa1         137 YDFIFVDADKDNYLNYHKRLIDLVKVGGVIGYD  169 (227)
T ss_dssp             BSEEEECSCSTTHHHHHHHHHHHBCTTCCEEEE
T ss_pred             eeEEEeccchhhhHHHHHHHHhhcCCCcEEEEc
Confidence            99997433322   2456788999999998754

>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=88.74  E-value=0.21  Score=39.39  Aligned_cols=31  Identities=26%  Similarity=0.322  Sum_probs=28.0

Q ss_pred             EEEEecChHHHHHHHHHHHcCCeEEEEeCCc
Q 018382          184 GGILGLGGVGHMGVLIAKAMGHHVTVISSSD  214 (357)
Q Consensus       184 VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~  214 (357)
                      |+|+|+|+.|+.++..+...|.+|+++...+
T Consensus         6 vvVIGgGpaGl~aA~~aa~~G~kV~vie~~~   36 (221)
T d1dxla1           6 VVIIGGGPGGYVAAIKAAQLGFKTTCIEKRG   36 (221)
T ss_dssp             EEEECCSHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred             EEEECCCHHHHHHHHHHHHCCCcEEEEEecC
Confidence            7889999999999999999999999998653

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=88.73  E-value=0.26  Score=38.28  Aligned_cols=39  Identities=18%  Similarity=0.174  Sum_probs=32.5

Q ss_pred             eEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHH
Q 018382          183 RGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAME  222 (357)
Q Consensus       183 ~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~  222 (357)
                      +|.|+|.|-+|+.++.++ +.|.+|+..+.++++.+.+.+
T Consensus         2 kI~ViGlG~vGl~~a~~~-a~g~~V~g~Din~~~v~~l~~   40 (196)
T d1dlja2           2 KIAVAGSGYVGLSLGVLL-SLQNEVTIVDILPSKVDKINN   40 (196)
T ss_dssp             EEEEECCSHHHHHHHHHH-TTTSEEEEECSCHHHHHHHHT
T ss_pred             EEEEECCChhHHHHHHHH-HCCCcEEEEECCHHHHHHHhh
Confidence            578889999999887666 469999999999888877754

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=88.72  E-value=0.16  Score=41.67  Aligned_cols=31  Identities=19%  Similarity=0.209  Sum_probs=28.4

Q ss_pred             eEEEEecChHHHHHHHHHHHcCCeEEEEeCC
Q 018382          183 RGGILGLGGVGHMGVLIAKAMGHHVTVISSS  213 (357)
Q Consensus       183 ~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~  213 (357)
                      +|+|+|+|..|+.++..+...|.+|+++..+
T Consensus         2 ~V~IIGaG~aGL~aA~~L~~~G~~V~vlE~~   32 (347)
T d2ivda1           2 NVAVVGGGISGLAVAHHLRSRGTDAVLLESS   32 (347)
T ss_dssp             CEEEECCBHHHHHHHHHHHTTTCCEEEECSS
T ss_pred             eEEEECCCHHHHHHHHHHHhCCCCEEEEecC
Confidence            5899999999999999999999999999865

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=88.64  E-value=0.22  Score=35.30  Aligned_cols=80  Identities=13%  Similarity=0.091  Sum_probs=48.4

Q ss_pred             CCCeEEEEecCh-----------HHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcC-CcEEE-cCCChhHHHHhh--CC
Q 018382          180 SGLRGGILGLGG-----------VGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLG-ADQYL-VSSDATRMQEAA--DS  244 (357)
Q Consensus       180 ~~~~VlI~G~g~-----------~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g-~~~vv-~~~~~~~~~~~~--~~  244 (357)
                      ..++|||+|+|+           .+..++.-+|..|.+++.+-++++...--   +. +|+++ ..-..+.+.++.  +.
T Consensus         3 ~~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVstd---~d~aD~lYfeplt~e~v~~Ii~~E~   79 (121)
T d1a9xa4           3 DREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTD---YDTSDRLYFEPVTLEDVLEIVRIEK   79 (121)
T ss_dssp             SSCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSSTTS---TTSSSEEECCCCSHHHHHHHHHHHC
T ss_pred             CCCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhhcC---hhhcCceEEccCCHHHHHHHHHHhC
Confidence            457899999876           23445555667799999998887764311   22 44443 222334455543  37


Q ss_pred             ccEEEEcCCCCCChHHHH
Q 018382          245 LDYIIDTVPANHPLEPYL  262 (357)
Q Consensus       245 ~d~v~d~~g~~~~~~~~~  262 (357)
                      +|.|+-..|+...++.+.
T Consensus        80 p~~ii~~~GGQtalnla~   97 (121)
T d1a9xa4          80 PKGVIVQYGGQTPLKLAR   97 (121)
T ss_dssp             CSEEECSSSTHHHHTTHH
T ss_pred             CCEEEeehhhhhHHHHHH
Confidence            888888887763333343

>d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=88.50  E-value=0.59  Score=37.59  Aligned_cols=35  Identities=29%  Similarity=0.333  Sum_probs=29.6

Q ss_pred             CCCCeEEEEecChHHHHHHHHHH-HcCCeEEEEeCC
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAK-AMGHHVTVISSS  213 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~-~~g~~V~~~~~~  213 (357)
                      -+|.+|+|.|.|.+|..+++++. ..|++|+.+..+
T Consensus        30 l~g~~v~IqGfGnVG~~~a~~L~~~~G~kvv~vsD~   65 (239)
T d1gtma1          30 LKGKTIAIQGYGNAGYYLAKIMSEDFGMKVVAVSDS   65 (239)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHHHTTCCEEEEEECS
T ss_pred             cCCCEEEEECCCHHHHHHHHHHHHhcCcceeecccc
Confidence            36899999999999999999774 579999887654

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.36  E-value=0.69  Score=38.96  Aligned_cols=74  Identities=15%  Similarity=0.072  Sum_probs=45.1

Q ss_pred             CeE-EEEec-ChHHHHHHHHHHHcCCeEEEEeCCcH-----HHHHH----HHhcCCc-EE--EcCCChhHHHHhhC--Cc
Q 018382          182 LRG-GILGL-GGVGHMGVLIAKAMGHHVTVISSSDK-----KRVEA----MEHLGAD-QY--LVSSDATRMQEAAD--SL  245 (357)
Q Consensus       182 ~~V-lI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~-----~~~~~----~~~~g~~-~v--v~~~~~~~~~~~~~--~~  245 (357)
                      ++| ||+|+ |-+|..++..+...|.+|+++++...     +.+.+    ....... ..  .|..+.+.+..+..  .+
T Consensus         1 kKI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~   80 (347)
T d1t2aa_           1 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKP   80 (347)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCC
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhccc
Confidence            357 99987 99999999999889999999987532     11111    0101111 12  24455555555543  67


Q ss_pred             cEEEEcCCCC
Q 018382          246 DYIIDTVPAN  255 (357)
Q Consensus       246 d~v~d~~g~~  255 (357)
                      ++++.+.+..
T Consensus        81 ~~v~~~~a~~   90 (347)
T d1t2aa_          81 TEIYNLGAQS   90 (347)
T ss_dssp             SEEEECCSCC
T ss_pred             ceeeeeeecc
Confidence            7888776643

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=88.34  E-value=0.29  Score=36.21  Aligned_cols=70  Identities=13%  Similarity=0.183  Sum_probs=44.9

Q ss_pred             CCeEEEEecChHHHHHHHHHHHcCC--eEEEEeCCcHHHHHHH-H------hcCCcEEEcCCChhHHHHhhCCccEEEEc
Q 018382          181 GLRGGILGLGGVGHMGVLIAKAMGH--HVTVISSSDKKRVEAM-E------HLGADQYLVSSDATRMQEAADSLDYIIDT  251 (357)
Q Consensus       181 ~~~VlI~G~g~~G~~ai~la~~~g~--~V~~~~~~~~~~~~~~-~------~~g~~~vv~~~~~~~~~~~~~~~d~v~d~  251 (357)
                      ..+|.|+|+|.+|...+..+...|.  +++.++..+++.+-.. +      ..+...+. ..+.+    ...+.|+|+-+
T Consensus         5 ~~KI~IIGaG~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~-~~d~~----~~~~adivvit   79 (146)
T d1ez4a1           5 HQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIY-SGEYS----DCKDADLVVIT   79 (146)
T ss_dssp             BCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEE-ECCGG----GGTTCSEEEEC
T ss_pred             CCEEEEECCCHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEe-eccHH----HhccccEEEEe
Confidence            4589999999999998888877774  8999988876543211 1      01122222 22211    23589999998


Q ss_pred             CCCC
Q 018382          252 VPAN  255 (357)
Q Consensus       252 ~g~~  255 (357)
                      +|..
T Consensus        80 ag~~   83 (146)
T d1ez4a1          80 AGAP   83 (146)
T ss_dssp             CCC-
T ss_pred             cccc
Confidence            8775

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=88.33  E-value=1.7  Score=36.31  Aligned_cols=75  Identities=12%  Similarity=0.127  Sum_probs=47.3

Q ss_pred             CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCC----cHHHHHHHHhcC-----CcEEE--cCCChhHHHHhhCCccE
Q 018382          180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSS----DKKRVEAMEHLG-----ADQYL--VSSDATRMQEAADSLDY  247 (357)
Q Consensus       180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~----~~~~~~~~~~~g-----~~~vv--~~~~~~~~~~~~~~~d~  247 (357)
                      .-+++||+|+ |-+|..++..+...|.+|+++++.    ............     .-.++  |..+...........+.
T Consensus        15 ~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~~~   94 (341)
T d1sb8a_          15 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVDY   94 (341)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCSE
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeeccccccccccccccccc
Confidence            3478999987 999999999999999999998742    122222222111     11222  34444455555567777


Q ss_pred             EEEcCCC
Q 018382          248 IIDTVPA  254 (357)
Q Consensus       248 v~d~~g~  254 (357)
                      ++.....
T Consensus        95 v~~~~a~  101 (341)
T d1sb8a_          95 VLHQAAL  101 (341)
T ss_dssp             EEECCSC
T ss_pred             ccccccc
Confidence            7766544

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=88.15  E-value=1.1  Score=31.92  Aligned_cols=89  Identities=12%  Similarity=0.112  Sum_probs=59.3

Q ss_pred             eEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEE-cCCChhHHHHhh-CCccEEEEcCCCCC---C
Q 018382          183 RGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYL-VSSDATRMQEAA-DSLDYIIDTVPANH---P  257 (357)
Q Consensus       183 ~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv-~~~~~~~~~~~~-~~~d~v~d~~g~~~---~  257 (357)
                      .++|.|.|.+|..+++.++  +.+|+++..++++.+.+.+ .|...+. |..+++.+++.. ..++.++-+.....   .
T Consensus         2 HivI~G~g~~g~~l~~~L~--~~~i~vi~~d~~~~~~~~~-~~~~~i~Gd~~~~~~L~~a~i~~A~~vi~~~~~d~~n~~   78 (129)
T d2fy8a1           2 HVVICGWSESTLECLRELR--GSEVFVLAEDENVRKKVLR-SGANFVHGDPTRVSDLEKANVRGARAVIVNLESDSETIH   78 (129)
T ss_dssp             CEEEESCCHHHHHHHHTSC--GGGEEEEESCTTHHHHHHH-TTCEEEESCTTSHHHHHHTTCTTCSEEEECCSSHHHHHH
T ss_pred             EEEEECCCHHHHHHHHHHc--CCCCEEEEcchHHHHHHHh-cCccccccccCCHHHHHHhhhhcCcEEEEeccchhhhHH
Confidence            4788899999998887764  4477888888888887776 7765442 444556566543 37888887776641   1


Q ss_pred             hHHHHhccccCCeEEEE
Q 018382          258 LEPYLSLLKLDGKLILT  274 (357)
Q Consensus       258 ~~~~~~~l~~~G~~v~~  274 (357)
                      .-...+.+.|..+++..
T Consensus        79 ~~~~~r~~~~~~~iia~   95 (129)
T d2fy8a1          79 CILGIRKIDESVRIIAE   95 (129)
T ss_dssp             HHHHHHHHCSSSCEEEE
T ss_pred             HHHHHHHHCCCceEEEE
Confidence            22344556677666554

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=88.14  E-value=0.15  Score=42.08  Aligned_cols=60  Identities=17%  Similarity=0.175  Sum_probs=38.9

Q ss_pred             eEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhC--CccEEEEcCCC
Q 018382          183 RGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAAD--SLDYIIDTVPA  254 (357)
Q Consensus       183 ~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~--~~d~v~d~~g~  254 (357)
                      +|||+|+ |.+|..++..+...|. ++++.+....       +    ..|..+.+.+++...  .+|+||.+++-
T Consensus         2 KILItG~tGfiG~~l~~~L~~~g~-~v~~~~~~~~-------~----~~Dl~~~~~~~~~i~~~~~D~Vih~Aa~   64 (298)
T d1n2sa_           2 NILLFGKTGQVGWELQRSLAPVGN-LIALDVHSKE-------F----CGDFSNPKGVAETVRKLRPDVIVNAAAH   64 (298)
T ss_dssp             EEEEECTTSHHHHHHHHHTTTTSE-EEEECTTCSS-------S----CCCTTCHHHHHHHHHHHCCSEEEECCCC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCC-EEEEECCCcc-------c----cCcCCCHHHHHHHHHHcCCCEEEEeccc
Confidence            5899987 9999998887776664 4444443211       1    124445555555433  68999999874

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=88.12  E-value=2.7  Score=30.33  Aligned_cols=68  Identities=21%  Similarity=0.259  Sum_probs=41.9

Q ss_pred             eEEEEecChHHHHHHHHHHHcCC--eEEEEeCCcHHHHHHHHhc-------CCcEEEcCCChhHHHHhhCCccEEEEcCC
Q 018382          183 RGGILGLGGVGHMGVLIAKAMGH--HVTVISSSDKKRVEAMEHL-------GADQYLVSSDATRMQEAADSLDYIIDTVP  253 (357)
Q Consensus       183 ~VlI~G~g~~G~~ai~la~~~g~--~V~~~~~~~~~~~~~~~~~-------g~~~vv~~~~~~~~~~~~~~~d~v~d~~g  253 (357)
                      +|.|+|+|.+|...+..+...+.  ++...+.++++.+.....+       +...+ ...+.    +...+.|+|+-++|
T Consensus         2 KI~IIGaG~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~-~~~~~----~~~~~adivvitag   76 (140)
T d1a5za1           2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANI-YAGDY----ADLKGSDVVIVAAG   76 (140)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEE-EECCG----GGGTTCSEEEECCC
T ss_pred             EEEEECcCHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccc-cCCcH----HHhcCCCEEEEecc
Confidence            57788999999988777766664  7888887776543221111       11111 11111    12357999999987


Q ss_pred             CC
Q 018382          254 AN  255 (357)
Q Consensus       254 ~~  255 (357)
                      ..
T Consensus        77 ~~   78 (140)
T d1a5za1          77 VP   78 (140)
T ss_dssp             CC
T ss_pred             cc
Confidence            74

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=88.12  E-value=0.63  Score=35.14  Aligned_cols=83  Identities=14%  Similarity=0.093  Sum_probs=55.1

Q ss_pred             eEEEEecChHHHHHHHHHHHc-CCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCCChHHH
Q 018382          183 RGGILGLGGVGHMGVLIAKAM-GHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPY  261 (357)
Q Consensus       183 ~VlI~G~g~~G~~ai~la~~~-g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~  261 (357)
                      +|.|+|+|.+|...+..++.. +++++.++....+.      .....+....+   .......+|+|+.|++.......+
T Consensus         5 rvgiiG~G~ig~~~~~~l~~~~~~elvav~~~~~~~------~~~~~~~~~~~---~~~~~~~~D~Vvi~tp~~~h~~~a   75 (170)
T d1f06a1           5 RVAIVGYGNLGRSVEKLIAKQPDMDLVGIFSRRATL------DTKTPVFDVAD---VDKHADDVDVLFLCMGSATDIPEQ   75 (170)
T ss_dssp             EEEEECCSHHHHHHHHHHTTCSSEEEEEEEESSSCC------SSSSCEEEGGG---GGGTTTTCSEEEECSCTTTHHHHH
T ss_pred             eEEEECChHHHHHHHHHHHhCCCcEEEEEEeccccc------ccccccccchh---hhhhccccceEEEeCCCcccHHHH
Confidence            588999999999888877765 56777666443221      11112222222   223345799999999888567788


Q ss_pred             HhccccCCeEEEE
Q 018382          262 LSLLKLDGKLILT  274 (357)
Q Consensus       262 ~~~l~~~G~~v~~  274 (357)
                      .++++.|-.++..
T Consensus        76 ~~aL~aG~~vv~~   88 (170)
T d1f06a1          76 APKFAQFACTVDT   88 (170)
T ss_dssp             HHHHTTTSEEECC
T ss_pred             HHHHHCCCcEEEe
Confidence            8889988877643

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=87.88  E-value=0.44  Score=35.30  Aligned_cols=47  Identities=26%  Similarity=0.170  Sum_probs=37.6

Q ss_pred             hhhhhhhhccCCCCCCCeEEEE--ecChHHHHHHHHHHHcCCeEEEEeCCc
Q 018382          166 VTVFSPLSHFGLKQSGLRGGIL--GLGGVGHMGVLIAKAMGHHVTVISSSD  214 (357)
Q Consensus       166 ~ta~~~l~~~~~~~~~~~VlI~--G~g~~G~~ai~la~~~g~~V~~~~~~~  214 (357)
                      .|....+.  ....+++.|+|+  |+|-+|+-+++.+...|.+|+++.+.+
T Consensus        26 ~t~~d~l~--~~~~~~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~   74 (156)
T d1djqa2          26 LTPEQVMD--GKKKIGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH   74 (156)
T ss_dssp             ECHHHHHH--TCSCCCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             ECHHHHhc--CccccCCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCC
Confidence            35555543  233788999988  779999999999999999999999864

>d2dula1 c.66.1.58 (A:3-377) N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TRM1-like
domain: N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=87.60  E-value=0.58  Score=40.41  Aligned_cols=90  Identities=21%  Similarity=0.184  Sum_probs=61.6

Q ss_pred             EE-ecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcC---Cc----------------EEEcCCCh-hHHHHhhC
Q 018382          186 IL-GLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLG---AD----------------QYLVSSDA-TRMQEAAD  243 (357)
Q Consensus       186 I~-G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g---~~----------------~vv~~~~~-~~~~~~~~  243 (357)
                      |+ +-++.|.-.++.++..|+ +|++.+-+++..+.+++.+-   ..                ..++..+. ..+.+...
T Consensus        49 vLD~~sasG~rsiRya~E~~~~~V~~nDis~~A~~~i~~N~~lN~~~~~~~~~~~~~~~~~~~~~~~~~Da~~~~~~~~~  128 (375)
T d2dula1          49 VLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMAERHR  128 (375)
T ss_dssp             EEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHHHSTT
T ss_pred             EEEcCCCccHHHHHHHHhCCCCEEEEecCCHHHHHHHHHHHHhcCccccccccccccccccceeEeehhhhhhhhHhhcC
Confidence            44 446678888899998888 89999999998888876432   10                11222222 23333345


Q ss_pred             CccEE-EEcCCCCC-ChHHHHhccccCCeEEEEc
Q 018382          244 SLDYI-IDTVPANH-PLEPYLSLLKLDGKLILTG  275 (357)
Q Consensus       244 ~~d~v-~d~~g~~~-~~~~~~~~l~~~G~~v~~g  275 (357)
                      .||+| +|.-|++. .+..+++.++.+|.+....
T Consensus       129 ~fDvIDiDPfGs~~pfldsAi~a~~~~Gll~vTa  162 (375)
T d2dula1         129 YFHFIDLDPFGSPMEFLDTALRSAKRRGILGVTA  162 (375)
T ss_dssp             CEEEEEECCSSCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred             cCCcccCCCCCCcHHHHHHHHHHhccCCEEEEEe
Confidence            79987 89998852 4678999999999877653

>d1sqga2 c.66.1.38 (A:145-428) Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: NOL1/NOP2/sun
domain: Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=87.57  E-value=0.73  Score=38.07  Aligned_cols=94  Identities=19%  Similarity=0.199  Sum_probs=55.1

Q ss_pred             CCCCeEEEEec--ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHH---hcCCc-EEEcCCChhHHHHh-hCCccEEE-E
Q 018382          179 QSGLRGGILGL--GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAME---HLGAD-QYLVSSDATRMQEA-ADSLDYII-D  250 (357)
Q Consensus       179 ~~~~~VlI~G~--g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~---~~g~~-~vv~~~~~~~~~~~-~~~~d~v~-d  250 (357)
                      ++|++||=..|  |+-..+++++  ..+.+|++.+.++.|...+++   ++|.. .++...+....... ...||.|+ |
T Consensus       101 ~~g~~vLD~CAaPGgKt~~la~l--~~~~~i~a~d~~~~R~~~l~~~~~r~g~~~~~~~~~~~~~~~~~~~~~fd~IL~D  178 (284)
T d1sqga2         101 QNGEHILDLCAAPGGKTTHILEV--APEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLD  178 (284)
T ss_dssp             CTTCEEEEESCTTCHHHHHHHHH--CTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTHHHHTTCCEEEEEEE
T ss_pred             cccceeEeccCccccchhhhhhh--hhhhhhhhhhcchhhhhhHhhhhhcccccceeeeccccccchhcccccccEEEEe
Confidence            88999998844  5544444443  223589999999888655543   37754 33333332222222 24699885 4


Q ss_pred             --cCCCC-------------------------CChHHHHhccccCCeEEEE
Q 018382          251 --TVPAN-------------------------HPLEPYLSLLKLDGKLILT  274 (357)
Q Consensus       251 --~~g~~-------------------------~~~~~~~~~l~~~G~~v~~  274 (357)
                        |+|..                         ..++.+++.++++|++|-.
T Consensus       179 aPCSg~G~~rr~p~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lk~gG~lvYs  229 (284)
T d1sqga2         179 APCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYA  229 (284)
T ss_dssp             CCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred             ccccccCccccccchhhccccchhhHHHHHHHHHHHHHHHhcCCCceEEEe
Confidence              55554                         2445566677777776643

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=87.36  E-value=0.27  Score=41.12  Aligned_cols=32  Identities=22%  Similarity=0.333  Sum_probs=28.8

Q ss_pred             eEEEEecChHHHHHHHHHHHcCCeEEEEeCCc
Q 018382          183 RGGILGLGGVGHMGVLIAKAMGHHVTVISSSD  214 (357)
Q Consensus       183 ~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~  214 (357)
                      .|+|+|||..|++++..++..|.+|++..+.+
T Consensus         9 dV~IIGAG~sGl~~a~~L~~~G~~v~i~Ek~~   40 (298)
T d1w4xa1           9 DVLVVGAGFSGLYALYRLRELGRSVHVIETAG   40 (298)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             CEEEECccHHHHHHHHHHHhCCCCEEEEEcCC
Confidence            48899999999999999999999999998754

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=87.34  E-value=0.72  Score=33.08  Aligned_cols=71  Identities=24%  Similarity=0.293  Sum_probs=46.6

Q ss_pred             eEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCCChHHH
Q 018382          183 RGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPY  261 (357)
Q Consensus       183 ~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~  261 (357)
                      +|.|+|+ |-+|.+..++++..+.+++.....+.           .            .....+|+++|.+... .....
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~-----------~------------~~~~~~DVvIDFS~p~-~~~~~   57 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNG-----------V------------EELDSPDVVIDFSSPE-ALPKT   57 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTE-----------E------------EECSCCSEEEECSCGG-GHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCc-----------H------------HHhccCCEEEEecCHH-HHHHH
Confidence            5889997 99999999999988887765432110           0            0113578888888776 55555


Q ss_pred             HhccccCCeEEEEccC
Q 018382          262 LSLLKLDGKLILTGVI  277 (357)
Q Consensus       262 ~~~l~~~G~~v~~g~~  277 (357)
                      ++.....+.=+.+|.+
T Consensus        58 l~~~~~~~~p~ViGTT   73 (128)
T d1vm6a3          58 VDLCKKYRAGLVLGTT   73 (128)
T ss_dssp             HHHHHHHTCEEEECCC
T ss_pred             HHHHHhcCCCEEEEcC
Confidence            5555555555555554

>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=87.14  E-value=0.3  Score=38.34  Aligned_cols=30  Identities=20%  Similarity=0.207  Sum_probs=27.6

Q ss_pred             EEEEecChHHHHHHHHHHHcCCeEEEEeCC
Q 018382          184 GGILGLGGVGHMGVLIAKAMGHHVTVISSS  213 (357)
Q Consensus       184 VlI~G~g~~G~~ai~la~~~g~~V~~~~~~  213 (357)
                      |+|+|+|+.|+.++..|...|.+|.++.+.
T Consensus         5 vvVIG~G~aG~~aA~~a~~~G~kV~iiE~~   34 (217)
T d1gesa1           5 YIAIGGGSGGIASINRAAMYGQKCALIEAK   34 (217)
T ss_dssp             EEEECCSHHHHHHHHHHHTTTCCEEEEESS
T ss_pred             EEEECCCHHHHHHHHHHHHCCCEEEEEecc
Confidence            788999999999999999999999999864

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=86.97  E-value=0.24  Score=41.36  Aligned_cols=31  Identities=26%  Similarity=0.208  Sum_probs=28.0

Q ss_pred             eEEEEecChHHHHHHHHHHHcCCeEEEEeCC
Q 018382          183 RGGILGLGGVGHMGVLIAKAMGHHVTVISSS  213 (357)
Q Consensus       183 ~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~  213 (357)
                      .|+|+|||..|+.++..+...|.+|.++..+
T Consensus         3 dv~IIGaG~sGl~~A~~L~~~g~~V~iiEk~   33 (298)
T d1i8ta1           3 DYIIVGSGLFGAVCANELKKLNKKVLVIEKR   33 (298)
T ss_dssp             EEEEECCSHHHHHHHHHHGGGTCCEEEECSS
T ss_pred             cEEEECCcHHHHHHHHHHHhCCCcEEEEECC
Confidence            4789999999999999998889999999865

>d2avda1 c.66.1.1 (A:44-262) COMT domain-containing protein 1, COMTD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: COMT domain-containing protein 1, COMTD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.83  E-value=0.87  Score=36.00  Aligned_cols=95  Identities=17%  Similarity=0.140  Sum_probs=61.5

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHc--CCeEEEEeCCcHHHHHHHHh---cCCc---EEEcCCChhHHHHh-----hCCc
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAM--GHHVTVISSSDKKRVEAMEH---LGAD---QYLVSSDATRMQEA-----ADSL  245 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~--g~~V~~~~~~~~~~~~~~~~---~g~~---~vv~~~~~~~~~~~-----~~~~  245 (357)
                      ...++||=+|.+ .|+.++.+|+.+  +.+|+.+..+++..+.+++.   .|..   .+......+.+.++     .+.+
T Consensus        58 ~~~k~vLEiGt~-~GyStl~~a~al~~~g~i~tie~~~~~~~~A~~~~~~ag~~~~i~~~~Gda~e~l~~~~~~~~~~~f  136 (219)
T d2avda1          58 IQAKKALDLGTF-TGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTF  136 (219)
T ss_dssp             TTCCEEEEECCT-TSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCE
T ss_pred             cCCCeEEEEech-hhHHHHHHHHhCCCCceEEEEeechhHHHHHHHHHHhcCccceEEEEEeehhhcchhhhhhcccCCc
Confidence            456789888873 367777888766  45999999998876666553   3532   22222323344433     2369


Q ss_pred             cEEEEcCCCCC---ChHHHHhccccCCeEEEE
Q 018382          246 DYIIDTVPANH---PLEPYLSLLKLDGKLILT  274 (357)
Q Consensus       246 d~v~d~~g~~~---~~~~~~~~l~~~G~~v~~  274 (357)
                      |+||--.....   .++.+++.|+++|.++.=
T Consensus       137 D~ifiD~dk~~y~~~~~~~~~lL~~GGvii~D  168 (219)
T d2avda1         137 DVAVVDADKENCSAYYERCLQLLRPGGILAVL  168 (219)
T ss_dssp             EEEEECSCSTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred             cEEEEeCCHHHHHHHHHHHHHHhcCCcEEEEe
Confidence            99975443331   356788999999998753

>d1jbqa_ c.79.1.1 (A:) Cystathionine beta-synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Cystathionine beta-synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.75  E-value=2.3  Score=36.04  Aligned_cols=100  Identities=17%  Similarity=0.119  Sum_probs=62.6

Q ss_pred             CCCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCC---cHHHHHHHHhcCCcEEEcCCC------------------
Q 018382          176 GLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSS---DKKRVEAMEHLGADQYLVSSD------------------  234 (357)
Q Consensus       176 ~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~---~~~~~~~~~~~g~~~vv~~~~------------------  234 (357)
                      +.+++++.|+.-.+|..|.+++..|+.+|.+++++.+.   +.+.+.++. +|++-+.....                  
T Consensus        92 g~~~~~~~vv~aSsGN~g~a~A~~a~~~Gi~~~iv~p~~~~~~k~~~i~~-~GA~vv~v~~~~~~~~~~~~~~~~~~~~~  170 (355)
T d1jbqa_          92 GTLKPGDTIIEPTSGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDVLRA-LGAEIVRTPTNARFDSPESHVGVAWRLKN  170 (355)
T ss_dssp             TCSCTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEECSCCCHHHHHHHHH-TTCEEEECCC-------CCHHHHHHHHHH
T ss_pred             CCcccCceEEEecccchhhHHHHHHHhccCCeEEEeeccchHHHHHHHHh-cCCeEEEecccccchhhhhhhhHHHHHHH
Confidence            44355565555567999999999999999977776543   345566655 99875431100                  


Q ss_pred             --------------h-----------hHHHHhhCCccEEEEcCCCCCChHH---HHhccccCCeEEEEcc
Q 018382          235 --------------A-----------TRMQEAADSLDYIIDTVPANHPLEP---YLSLLKLDGKLILTGV  276 (357)
Q Consensus       235 --------------~-----------~~~~~~~~~~d~v~d~~g~~~~~~~---~~~~l~~~G~~v~~g~  276 (357)
                                    .           +.++++...+|++|-++|+..++.-   .++...+.-+++.+..
T Consensus       171 ~~~~~~~~~~~~~~~~~~ag~~t~~~EI~~ql~~~~d~vv~~vG~GG~~~Gi~~~lk~~~~~~kii~vep  240 (355)
T d1jbqa_         171 EIPNSHILDQYRNASNPLAHYDTTADEILQQCDGKLDMLVASVGTGGTITGIARKLKEKCPGCRIIGVDP  240 (355)
T ss_dssp             HSTTEECCCTTTCTHHHHHHHHTHHHHHHHHHTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred             hccccccccccCcccchhhhcccchhhhhhhcCCCCCeeEecccCCchHHHHHHHHhhcCCcceEEeecc
Confidence                          0           0122223368999999998754443   4444556777776643

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=86.60  E-value=0.33  Score=39.56  Aligned_cols=32  Identities=13%  Similarity=0.168  Sum_probs=28.1

Q ss_pred             eEEEEecChHHHHHHHHHHHcCCeEEEEeCCc
Q 018382          183 RGGILGLGGVGHMGVLIAKAMGHHVTVISSSD  214 (357)
Q Consensus       183 ~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~  214 (357)
                      -|+|+|+|.+|++++.-+...|.+|+++.+.+
T Consensus         6 DvvIIGaGi~Gls~A~~La~~G~~V~vlE~~~   37 (276)
T d1ryia1           6 EAVVIGGGIIGSAIAYYLAKENKNTALFESGT   37 (276)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             CEEEECcCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            38999999999998888888899999998754

>d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Phenol hydroxylase
species: Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]

Probab=86.37  E-value=0.25  Score=41.77  Aligned_cols=32  Identities=22%  Similarity=0.261  Sum_probs=26.3

Q ss_pred             eEEEEecChHHHHHHHHHH-----HcCCeEEEEeCCc
Q 018382          183 RGGILGLGGVGHMGVLIAK-----AMGHHVTVISSSD  214 (357)
Q Consensus       183 ~VlI~G~g~~G~~ai~la~-----~~g~~V~~~~~~~  214 (357)
                      -|+|+|+|+.|++++.++.     ..|.+|+++.+.+
T Consensus         9 DV~IvGaG~aGl~lA~~La~~~~~~~G~~v~vlEr~~   45 (360)
T d1pn0a1           9 DVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRS   45 (360)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSS
T ss_pred             CEEEECcCHHHHHHHHHHHhcccccCCCcEEEEcCCC
Confidence            3899999999999887773     4689999998654

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=86.29  E-value=0.53  Score=34.98  Aligned_cols=36  Identities=17%  Similarity=0.046  Sum_probs=29.5

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCc
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSD  214 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~  214 (357)
                      .-+++|+|+|+|.+|.=++..+...|+ .|+++.+.+
T Consensus        43 ~~~~kVvVIGGGdtA~D~A~~a~r~GA~~V~vi~rr~   79 (153)
T d1gtea3          43 SIRGAVIVLGAGDTAFDCATSALRCGARRVFLVFRKG   79 (153)
T ss_dssp             CCCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred             cCCCEEEEECCChhHHHHHHHHHHcCCcceeEEEeCC
Confidence            346789999999999999998888898 577776643

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=86.21  E-value=0.49  Score=39.38  Aligned_cols=59  Identities=20%  Similarity=0.141  Sum_probs=39.5

Q ss_pred             CeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhC--CccEEEEcCCC
Q 018382          182 LRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAAD--SLDYIIDTVPA  254 (357)
Q Consensus       182 ~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~--~~d~v~d~~g~  254 (357)
                      ++|||+|+ |-+|..+++.+...|..|+++....+              +|..+.+.+.++..  .+|.++.+++.
T Consensus         3 kkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~~--------------~~~~~~~~~~~~~~~~~~d~v~~~a~~   64 (315)
T d1e6ua_           3 QRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDE--------------LNLLDSRAVHDFFASERIDQVYLAAAK   64 (315)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTTT--------------CCTTCHHHHHHHHHHHCCSEEEECCCC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCchh--------------ccccCHHHHHHHHhhcCCCEEEEcchh
Confidence            47999987 99999999999888988877654321              23333344444322  57778776543

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=86.18  E-value=0.6  Score=39.51  Aligned_cols=74  Identities=19%  Similarity=0.087  Sum_probs=45.8

Q ss_pred             CeEEEEec-ChHHHHHHHHHHHcCCe--EEEEeCCcH--HHHHHHHhcC--CcE-EEcCCChhHHHHhhCCccEEEEcCC
Q 018382          182 LRGGILGL-GGVGHMGVLIAKAMGHH--VTVISSSDK--KRVEAMEHLG--ADQ-YLVSSDATRMQEAADSLDYIIDTVP  253 (357)
Q Consensus       182 ~~VlI~G~-g~~G~~ai~la~~~g~~--V~~~~~~~~--~~~~~~~~~g--~~~-vv~~~~~~~~~~~~~~~d~v~d~~g  253 (357)
                      .+|||+|+ |-+|..++..+...|..  |++.+....  .........+  ... ..|..+.+.+..+....|.|+..++
T Consensus         3 mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~Di~d~~~~~~~~~~~~~v~~~a~   82 (346)
T d1oc2a_           3 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAKADAIVHYAA   82 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTTCSEEEECCS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHHhhcCCeEEEEccCCCHHHHHHHHhhhhhhhhhhh
Confidence            57999987 99999999888777765  554442111  1111111112  222 2355567777888888999988776


Q ss_pred             CC
Q 018382          254 AN  255 (357)
Q Consensus       254 ~~  255 (357)
                      ..
T Consensus        83 ~~   84 (346)
T d1oc2a_          83 ES   84 (346)
T ss_dssp             CC
T ss_pred             cc
Confidence            54

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.96  E-value=0.35  Score=40.66  Aligned_cols=30  Identities=20%  Similarity=0.244  Sum_probs=27.4

Q ss_pred             EEEEecChHHHHHHHHHHHcCCeEEEEeCC
Q 018382          184 GGILGLGGVGHMGVLIAKAMGHHVTVISSS  213 (357)
Q Consensus       184 VlI~G~g~~G~~ai~la~~~g~~V~~~~~~  213 (357)
                      |+|+|+|..|+.++..++..|.+|+++..+
T Consensus         2 ViVIGaG~aGL~aA~~L~~~G~~V~VlE~~   31 (383)
T d2v5za1           2 VVVVGGGISGMAAAKLLHDSGLNVVVLEAR   31 (383)
T ss_dssp             EEEECCBHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             EEEECCCHHHHHHHHHHHhCCCCEEEEecC
Confidence            789999999999999999999999999864

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=85.95  E-value=2.5  Score=30.62  Aligned_cols=70  Identities=17%  Similarity=0.092  Sum_probs=43.1

Q ss_pred             CeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcC-------Cc-EEEcCCChhHHHHhhCCccEEEEcC
Q 018382          182 LRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLG-------AD-QYLVSSDATRMQEAADSLDYIIDTV  252 (357)
Q Consensus       182 ~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g-------~~-~vv~~~~~~~~~~~~~~~d~v~d~~  252 (357)
                      .+|.|+|+|.+|..++.++...+. +++.++..+++.+.....+.       .. .+....+.    +...+.|+|+-++
T Consensus         2 ~KI~IIGaG~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~d~----~~~~~advvvita   77 (142)
T d1uxja1           2 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNY----ADTANSDVIVVTS   77 (142)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCG----GGGTTCSEEEECC
T ss_pred             CeEEEECCCHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEecCcH----HHhcCCCEEEEee
Confidence            468899999999888777766665 88888877765433222121       11 11111111    1234799999998


Q ss_pred             CCC
Q 018382          253 PAN  255 (357)
Q Consensus       253 g~~  255 (357)
                      |..
T Consensus        78 g~~   80 (142)
T d1uxja1          78 GAP   80 (142)
T ss_dssp             SCC
T ss_pred             ecc
Confidence            864

>d1ebda1 c.3.1.5 (A:7-154,A:272-346) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=85.94  E-value=0.42  Score=37.40  Aligned_cols=30  Identities=23%  Similarity=0.438  Sum_probs=27.3

Q ss_pred             EEEEecChHHHHHHHHHHHcCCeEEEEeCC
Q 018382          184 GGILGLGGVGHMGVLIAKAMGHHVTVISSS  213 (357)
Q Consensus       184 VlI~G~g~~G~~ai~la~~~g~~V~~~~~~  213 (357)
                      |+|+|+|+.|+.++..|...|.+|.++.+.
T Consensus         6 viVIG~GpaGl~aA~~aar~G~kV~vIEk~   35 (223)
T d1ebda1           6 TLVVGAGPGGYVAAIRAAQLGQKVTIVEKG   35 (223)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             EEEECCCHHHHHHHHHHHHCCCEEEEEecC
Confidence            788899999999999999999999999754

>d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=85.79  E-value=0.39  Score=37.90  Aligned_cols=31  Identities=19%  Similarity=0.335  Sum_probs=27.4

Q ss_pred             EEEEecChHHHHHHHHHHHcCCeEEEEeCCc
Q 018382          184 GGILGLGGVGHMGVLIAKAMGHHVTVISSSD  214 (357)
Q Consensus       184 VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~  214 (357)
                      |+|+|+|+.|+.++..|...|.+|.++...+
T Consensus         8 viVIG~GpAGl~aA~~aa~~G~kV~lie~~~   38 (233)
T d1v59a1           8 VVIIGGGPAGYVAAIKAAQLGFNTACVEKRG   38 (233)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             EEEECCCHHHHHHHHHHHHCCCcEEEEEecC
Confidence            7889999999999888888899999998653

>d1lvla1 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=85.55  E-value=0.38  Score=37.89  Aligned_cols=31  Identities=19%  Similarity=0.234  Sum_probs=28.1

Q ss_pred             eEEEEecChHHHHHHHHHHHcCCeEEEEeCC
Q 018382          183 RGGILGLGGVGHMGVLIAKAMGHHVTVISSS  213 (357)
Q Consensus       183 ~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~  213 (357)
                      .++|+|+|+.|+.++..+..+|.+|.++...
T Consensus         7 DlvVIG~GpaGl~aA~~aa~~G~~V~liE~~   37 (220)
T d1lvla1           7 TLLIIGGGPGGYVAAIRAGQLGIPTVLVEGQ   37 (220)
T ss_dssp             SEEEECCSHHHHHHHHHHHHHTCCEEEECSS
T ss_pred             CEEEECCCHHHHHHHHHHHHCCCcEEEEecC
Confidence            4788999999999999999999999999864

>d1ojta1 c.3.1.5 (A:117-275,A:401-470) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=85.46  E-value=0.46  Score=37.65  Aligned_cols=31  Identities=23%  Similarity=0.249  Sum_probs=28.0

Q ss_pred             EEEEecChHHHHHHHHHHHcCCeEEEEeCCc
Q 018382          184 GGILGLGGVGHMGVLIAKAMGHHVTVISSSD  214 (357)
Q Consensus       184 VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~  214 (357)
                      |+|+|+|+.|+.++..+...|.+|.++...+
T Consensus         9 viIIG~GPaGlsaA~~aa~~G~~V~viE~~~   39 (229)
T d1ojta1           9 VVVLGGGPGGYSAAFAAADEGLKVAIVERYK   39 (229)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             EEEECcCHHHHHHHHHHHHCCCeEEEEeccC
Confidence            7888999999999999999999999998654

>d1k3ta1 c.2.1.3 (A:1-164,A:334-359) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=85.46  E-value=1.6  Score=33.57  Aligned_cols=94  Identities=13%  Similarity=0.145  Sum_probs=57.9

Q ss_pred             eEEEEecChHHHHHHHHHHHc---C--CeEEEEe-C--CcHHHHHHHHhcC-------Cc---------------EEEc-
Q 018382          183 RGGILGLGGVGHMGVLIAKAM---G--HHVTVIS-S--SDKKRVEAMEHLG-------AD---------------QYLV-  231 (357)
Q Consensus       183 ~VlI~G~g~~G~~ai~la~~~---g--~~V~~~~-~--~~~~~~~~~~~~g-------~~---------------~vv~-  231 (357)
                      +|.|.|-|-+|..+.+.+-..   +  .+|+.+. .  +.+....+.+ +-       .+               .+++ 
T Consensus         4 kigINGFGRIGR~vlR~~~~~~~~~~~i~iv~Ind~~~~~~~~ayLlk-yDSvhG~~~~~v~~~~~~~~~~~~~~~i~~g   82 (190)
T d1k3ta1           4 KVGINGFGRIGRMVFQALCEDGLLGTEIDVVAVVDMNTDAEYFAYQMR-YDTVHGKFKYEVTTTKSSPSVAKDDTLVVNG   82 (190)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCBTTTEEEEEEEESCCCHHHHHHHHH-EETTTEECSSCEEEECSSTTCSSCCEEEETT
T ss_pred             EEEEECCChHHHHHHHHHHHcCCCCCCeEEEEEecCCCCHHHHHHHhh-ccccccCCCceEEEccCccccccccceEEcC
Confidence            578889999999988866433   2  2455433 2  3344555554 22       00               1111 


Q ss_pred             --------CCChhHHHHhhCCccEEEEcCCCCCChHHHHhccccCCeEEEEccC
Q 018382          232 --------SSDATRMQEAADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVI  277 (357)
Q Consensus       232 --------~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~  277 (357)
                              .++++.+.+...++|+|+||+|.....+.+...+..+-+-|.+..+
T Consensus        83 ~~i~~~~~~~~p~~i~W~~~gvDiViEcTG~f~~~~~a~~hl~~GakkViiSAP  136 (190)
T d1k3ta1          83 HRILCVKAQRNPADLPWGKLGVEYVIESTGLFTAKAAAEGHLRGGARKVVISAP  136 (190)
T ss_dssp             EEEEEEECCSCGGGSCHHHHTCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSC
T ss_pred             ceEEecccCCChhHCCHhhcCCcEEEEecccccccccchhhcccCcceeeeccC
Confidence                    2223333333448999999999886677788888887666666554

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=85.29  E-value=0.42  Score=40.98  Aligned_cols=73  Identities=11%  Similarity=-0.033  Sum_probs=44.0

Q ss_pred             eEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcH---HHHHHHHhcC---CcE-EEcCCChhHHHHhhC--CccEEEEcC
Q 018382          183 RGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDK---KRVEAMEHLG---ADQ-YLVSSDATRMQEAAD--SLDYIIDTV  252 (357)
Q Consensus       183 ~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~---~~~~~~~~~g---~~~-vv~~~~~~~~~~~~~--~~d~v~d~~  252 (357)
                      +|||+|+ |-+|..++..+...|.+|++..+...   ....+.....   ... ..|..+...+..+..  .+|+||.++
T Consensus         2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~VihlA   81 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMHLA   81 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHHhhhhcCCcEEEEccCCCHHHHHHHHHhCCCCEEEECc
Confidence            6899987 99999999988888986554432211   1111111011   111 235555555555433  789999998


Q ss_pred             CCC
Q 018382          253 PAN  255 (357)
Q Consensus       253 g~~  255 (357)
                      +..
T Consensus        82 a~~   84 (361)
T d1kewa_          82 AES   84 (361)
T ss_dssp             SCC
T ss_pred             ccc
Confidence            754

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=85.25  E-value=0.72  Score=32.25  Aligned_cols=35  Identities=23%  Similarity=0.116  Sum_probs=28.1

Q ss_pred             CCCeEEEEecChHHHHHHHHHHHc---CCeEEEEeCCc
Q 018382          180 SGLRGGILGLGGVGHMGVLIAKAM---GHHVTVISSSD  214 (357)
Q Consensus       180 ~~~~VlI~G~g~~G~~ai~la~~~---g~~V~~~~~~~  214 (357)
                      ..++++|+|+|.+|.=+++++..+   |.+|+++.+++
T Consensus        17 ~p~~v~IiGgG~ig~E~A~~l~~~~~~g~~Vtli~~~~   54 (117)
T d1feca2          17 APKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGD   54 (117)
T ss_dssp             CCSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSS
T ss_pred             cCCeEEEECCChHHHHHHHHhHhhcccccccceecccc
Confidence            347899999999999888776544   77999988764

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=85.08  E-value=0.86  Score=33.27  Aligned_cols=69  Identities=25%  Similarity=0.314  Sum_probs=40.7

Q ss_pred             CeEEEEecChHHHHHHHHHHHcCC--eEEEEeCCcHHHH-HHHHhcC------CcEEEcCCChhHHHHhhCCccEEEEcC
Q 018382          182 LRGGILGLGGVGHMGVLIAKAMGH--HVTVISSSDKKRV-EAMEHLG------ADQYLVSSDATRMQEAADSLDYIIDTV  252 (357)
Q Consensus       182 ~~VlI~G~g~~G~~ai~la~~~g~--~V~~~~~~~~~~~-~~~~~~g------~~~vv~~~~~~~~~~~~~~~d~v~d~~  252 (357)
                      .+|.|+|+|.+|...+..+...+.  +++.++..+++.+ ++.+ +-      ....+...+    .+...+.|+|+-++
T Consensus         2 ~KI~IIGaG~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~D-l~~~~~~~~~~~~~~~~----~~~~~~adivvita   76 (142)
T d1y6ja1           2 SKVAIIGAGFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMD-INHGLPFMGQMSLYAGD----YSDVKDCDVIVVTA   76 (142)
T ss_dssp             CCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHH-HTTSCCCTTCEEEC--C----GGGGTTCSEEEECC
T ss_pred             CeEEEECCCHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeee-eccCcccCCCeeEeeCc----HHHhCCCceEEEec
Confidence            368888999999998888877775  7888887766532 2222 22      111111111    12235799999988


Q ss_pred             CCC
Q 018382          253 PAN  255 (357)
Q Consensus       253 g~~  255 (357)
                      |..
T Consensus        77 g~~   79 (142)
T d1y6ja1          77 GAN   79 (142)
T ss_dssp             CC-
T ss_pred             ccc
Confidence            764

>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=84.77  E-value=0.44  Score=39.57  Aligned_cols=31  Identities=26%  Similarity=0.418  Sum_probs=27.6

Q ss_pred             eEEEEecChHHHHHHHHHHHcCCeEEEEeCC
Q 018382          183 RGGILGLGGVGHMGVLIAKAMGHHVTVISSS  213 (357)
Q Consensus       183 ~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~  213 (357)
                      -|+|+|+|..|+.++.-|...|++|+++...
T Consensus        18 DVlVIG~G~aGl~aA~~la~~G~~V~lvEK~   48 (308)
T d1y0pa2          18 DVVVVGSGGAGFSAAISATDSGAKVILIEKE   48 (308)
T ss_dssp             SEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             CEEEECcCHHHHHHHHHHHHCCCcEEEEecC
Confidence            3899999999999998888899999999854

>d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=84.63  E-value=0.44  Score=36.70  Aligned_cols=32  Identities=19%  Similarity=0.213  Sum_probs=27.8

Q ss_pred             CCeEEEEecChHHHHHHHHHHHcCCeEEEEeC
Q 018382          181 GLRGGILGLGGVGHMGVLIAKAMGHHVTVISS  212 (357)
Q Consensus       181 ~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~  212 (357)
                      ...|+|+|+|+.|+.++..+...|.+|+++..
T Consensus         5 ~~~VvIIGgGpaGl~aA~~~ar~g~~v~vie~   36 (192)
T d1vdca1           5 NTRLCIVGSGPAAHTAAIYAARAELKPLLFEG   36 (192)
T ss_dssp             EEEEEEECCSHHHHHHHHHHHHTTCCCEEECC
T ss_pred             cceEEEECCCHHHHHHHHHHHHcCCcEEEEEe
Confidence            35799999999999988888888999888864

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=84.59  E-value=0.47  Score=35.30  Aligned_cols=134  Identities=10%  Similarity=0.098  Sum_probs=74.3

Q ss_pred             CCeEEEEec-ChHHHHHHHHHHHcCC---eEEEEeCCcHHHHHHHHhcCCcEEEcCCC---hhHHHHhhCCccEEEEcCC
Q 018382          181 GLRGGILGL-GGVGHMGVLIAKAMGH---HVTVISSSDKKRVEAMEHLGADQYLVSSD---ATRMQEAADSLDYIIDTVP  253 (357)
Q Consensus       181 ~~~VlI~G~-g~~G~~ai~la~~~g~---~V~~~~~~~~~~~~~~~~~g~~~vv~~~~---~~~~~~~~~~~d~v~d~~g  253 (357)
                      |=+|.|+|+ |-+|.-+++++.....   ++...+++..        .|.........   ....+......|++|-+.+
T Consensus         1 g~kVaIvGATGyvG~eLirlL~~H~fp~~~l~~~~s~~s--------~G~~~~~~~~~~~~~~~~~~~~~~~d~~f~~~~   72 (154)
T d2gz1a1           1 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARS--------AGKSLKFKDQDITIEETTETAFEGVDIALFSAG   72 (154)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCCSCEEEEEEEECGGG--------TTCEEEETTEEEEEEECCTTTTTTCSEEEECSC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHcCCCCceEEEEeccccc--------ccccccccCCcccccccchhhhhhhhhhhhccC
Confidence            347999998 9999999999987742   4554443311        23111000000   0001112237899999988


Q ss_pred             CCCChHHHHhccccCCeEEEEccCCC---CcccchHH----HhhccceEEEEeecCHHHHHHHHHHHHhcCCCccE
Q 018382          254 ANHPLEPYLSLLKLDGKLILTGVINT---PMQFLTPM----VMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMI  322 (357)
Q Consensus       254 ~~~~~~~~~~~l~~~G~~v~~g~~~~---~~~~~~~~----~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~~i  322 (357)
                      .....+...+....+-++++.+..-+   .+.....+    .+.+..+++...+-..-.+.-+.-+++++.+++..
T Consensus        73 ~~~s~~~~~~~~~~~~~VIDlSsdfR~~~~~~~~~pe~n~~~~~~~~~iIAnPgC~tt~i~~l~PL~~~~lik~~~  148 (154)
T d2gz1a1          73 SSTSAKYAPYAVKAGVVVVDNTSYFRQNPDVPLVVPEVNAHALDAHNGIIACPNAAWNSVQIAETLHERGLVRPTA  148 (154)
T ss_dssp             HHHHHHHHHHHHHTTCEEEECSSTTTTCTTSCBCCHHHHGGGGGGCCSEEECCCTHHHHHHHHHHHHHTTCCSCCS
T ss_pred             ccchhhHHhhhccccceehhcChhhhccCCcccccchhhHHHhcCcCceEECCCCHHHHHHHHHHHHHhcCCCccc
Confidence            87455666667778888888876432   12222222    22233345555443222333455677788887653

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=84.49  E-value=0.44  Score=40.28  Aligned_cols=33  Identities=21%  Similarity=0.217  Sum_probs=26.6

Q ss_pred             CeEEEEecChHHHHHHHHHHHcC--CeEEEEeCCc
Q 018382          182 LRGGILGLGGVGHMGVLIAKAMG--HHVTVISSSD  214 (357)
Q Consensus       182 ~~VlI~G~g~~G~~ai~la~~~g--~~V~~~~~~~  214 (357)
                      ++|+|+|||..|++++..++..|  .+|++..+++
T Consensus         5 KrVaIIGaG~sGl~~A~~L~~~~~~~~v~vfEk~~   39 (335)
T d2gv8a1           5 RKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRG   39 (335)
T ss_dssp             CEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSS
T ss_pred             CeEEEECcCHHHHHHHHHHHHhCCCCCEEEEECCC
Confidence            68999999999998886665544  4899988774

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=84.40  E-value=0.48  Score=38.66  Aligned_cols=30  Identities=13%  Similarity=0.175  Sum_probs=27.1

Q ss_pred             EEEEecChHHHHHHHHHHHcCCeEEEEeCC
Q 018382          184 GGILGLGGVGHMGVLIAKAMGHHVTVISSS  213 (357)
Q Consensus       184 VlI~G~g~~G~~ai~la~~~g~~V~~~~~~  213 (357)
                      |+|+|+|.+|+.++.-+...|.+|+++.+.
T Consensus         6 vvIIGaGi~Gls~A~~La~~G~~V~viE~~   35 (281)
T d2gf3a1           6 VIVVGAGSMGMAAGYQLAKQGVKTLLVDAF   35 (281)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             EEEECcCHHHHHHHHHHHHCCCcEEEEeCC
Confidence            889999999999888888889999999864

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=84.15  E-value=5.7  Score=28.54  Aligned_cols=69  Identities=13%  Similarity=0.186  Sum_probs=43.5

Q ss_pred             eEEEEecChHHHHHHHHHHHcCC--eEEEEeCCcHHHHHH-------HHhcCC-cEEEcCCChhHHHHhhCCccEEEEcC
Q 018382          183 RGGILGLGGVGHMGVLIAKAMGH--HVTVISSSDKKRVEA-------MEHLGA-DQYLVSSDATRMQEAADSLDYIIDTV  252 (357)
Q Consensus       183 ~VlI~G~g~~G~~ai~la~~~g~--~V~~~~~~~~~~~~~-------~~~~g~-~~vv~~~~~~~~~~~~~~~d~v~d~~  252 (357)
                      +|.|+|+|.+|..++..+...+.  +++.++.++++.+-.       ...++. ..+....+.    +...+.|+|+-++
T Consensus         2 KI~IIGaG~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~~d~----~~~~~adiVvita   77 (142)
T d1ojua1           2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADY----SLLKGSEIIVVTA   77 (142)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESCG----GGGTTCSEEEECC
T ss_pred             EEEEECcCHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccCCCH----HHhccccEEEEec
Confidence            57888999999998887776665  788888777664321       111221 233322222    2445799999888


Q ss_pred             CCC
Q 018382          253 PAN  255 (357)
Q Consensus       253 g~~  255 (357)
                      |..
T Consensus        78 g~~   80 (142)
T d1ojua1          78 GLA   80 (142)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            753

>d3grsa1 c.3.1.5 (A:18-165,A:291-363) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.13  E-value=0.58  Score=36.61  Aligned_cols=30  Identities=23%  Similarity=0.267  Sum_probs=27.3

Q ss_pred             EEEEecChHHHHHHHHHHHcCCeEEEEeCC
Q 018382          184 GGILGLGGVGHMGVLIAKAMGHHVTVISSS  213 (357)
Q Consensus       184 VlI~G~g~~G~~ai~la~~~g~~V~~~~~~  213 (357)
                      |+|+|+|+.|+.++..+...|.+|.++...
T Consensus         6 viIIG~GpaG~~aA~~aar~G~kV~vIEk~   35 (221)
T d3grsa1           6 YLVIGGGSGGLASARRAAELGARAAVVESH   35 (221)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             EEEECCCHHHHHHHHHHHHCCCEEEEEecc
Confidence            788899999999999999999999999754

>d1ixka_ c.66.1.38 (A:) Hypothetical methyltransferase PH1374 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: NOL1/NOP2/sun
domain: Hypothetical methyltransferase PH1374
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=83.97  E-value=1.4  Score=36.82  Aligned_cols=76  Identities=16%  Similarity=0.189  Sum_probs=43.8

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcC--CeEEEEeCCcHHHHHHH---HhcCCcEEEc-CCChhHHHHhhCCccEEE-E-
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMG--HHVTVISSSDKKRVEAM---EHLGADQYLV-SSDATRMQEAADSLDYII-D-  250 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g--~~V~~~~~~~~~~~~~~---~~~g~~~vv~-~~~~~~~~~~~~~~d~v~-d-  250 (357)
                      ++|++||=..|++=|. +.+++...+  ..+++.+.++.|...+.   +++|...++. ..+..........||.|+ | 
T Consensus       115 ~~g~~vlD~CAapGgK-t~~l~~~~~~~~~i~a~d~~~~r~~~l~~~~~r~~~~~i~~~~~d~~~~~~~~~~fD~ILvDa  193 (313)
T d1ixka_         115 KPGEIVADMAAAPGGK-TSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGELNVEFDKILLDA  193 (313)
T ss_dssp             CTTCEEEECCSSCSHH-HHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGGGCCCEEEEEEEC
T ss_pred             Cccceeeecccchhhh-hHhhhhhcccccceeeeccCHHHHHHHHHHHHHHHhhccccccccccccccccccccEEEEcc
Confidence            8999988874322233 334444443  47899999888876554   3467544432 233333334445788885 4 


Q ss_pred             -cCCCC
Q 018382          251 -TVPAN  255 (357)
Q Consensus       251 -~~g~~  255 (357)
                       |+|..
T Consensus       194 PCSg~G  199 (313)
T d1ixka_         194 PCTGSG  199 (313)
T ss_dssp             CTTSTT
T ss_pred             ccccCC
Confidence             55554

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=83.76  E-value=0.44  Score=35.18  Aligned_cols=90  Identities=17%  Similarity=0.101  Sum_probs=47.6

Q ss_pred             eEEEEec-ChHHHHHHHH-HHHc--C-CeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCCC
Q 018382          183 RGGILGL-GGVGHMGVLI-AKAM--G-HHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHP  257 (357)
Q Consensus       183 ~VlI~G~-g~~G~~ai~l-a~~~--g-~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~  257 (357)
                      +|.|+|+ |.+|+-++++ +.+.  - .+++...++...............+.+..+..    ...++|++|-|++.. .
T Consensus         3 kVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~~~~~~~~~~~~~~~~~----~~~~~DivF~a~~~~-~   77 (146)
T d1t4ba1           3 NVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPSFGGTTGTLQDAFDLE----ALKALDIIVTCQGGD-Y   77 (146)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCGGGTCCCBCEETTCHH----HHHTCSEEEECSCHH-H
T ss_pred             EEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeeccccccccccccCCceeeecccchh----hhhcCcEEEEecCch-H
Confidence            6899998 9999999974 4432  2 36666665532211100000011111111111    124799999999987 4


Q ss_pred             hHHHHhccccCC---eEEEEccC
Q 018382          258 LEPYLSLLKLDG---KLILTGVI  277 (357)
Q Consensus       258 ~~~~~~~l~~~G---~~v~~g~~  277 (357)
                      .......+...|   .+++.+..
T Consensus        78 s~~~~~~~~~~g~~~~VID~Ss~  100 (146)
T d1t4ba1          78 TNEIYPKLRESGWQGYWIDAASS  100 (146)
T ss_dssp             HHHHHHHHHHTTCCCEEEECSST
T ss_pred             HHHhhHHHHhcCCCeecccCCcc
Confidence            444444444433   36666543

>d1np3a2 c.2.1.6 (A:1-182) Class I ketol-acid reductoisomerase (KARI) {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Class I ketol-acid reductoisomerase (KARI)
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=83.53  E-value=3.5  Score=30.98  Aligned_cols=86  Identities=23%  Similarity=0.222  Sum_probs=60.0

Q ss_pred             CCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHH-HHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCCCh
Q 018382          180 SGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKR-VEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPL  258 (357)
Q Consensus       180 ~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~-~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~~  258 (357)
                      ++++|.|+|-|.=|.+-++-++-.|.+|++--+...+. +.+++ -|.+..       .+.+.....|+|.--+.+. ..
T Consensus        15 k~k~IaViGYGsQG~AhAlNLrDSG~~V~VGLr~gs~s~~~A~~-~Gf~v~-------~~~eA~~~aDiim~L~PD~-~q   85 (182)
T d1np3a2          15 QGKKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSGSATVAKAEA-HGLKVA-------DVKTAVAAADVVMILTPDE-FQ   85 (182)
T ss_dssp             HTSCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTCHHHHHHHH-TTCEEE-------CHHHHHHTCSEEEECSCHH-HH
T ss_pred             CCCEEEEEeeCcHhHHHHhhhhhcCCCEEEEcCCCCccHHHHhh-hccccc-------cHHHHhhhcCeeeeecchH-HH
Confidence            47899999999999999999999999999988876544 34444 676432       2445566889998777664 32


Q ss_pred             HH-----HHhccccCCeEEEE
Q 018382          259 EP-----YLSLLKLDGKLILT  274 (357)
Q Consensus       259 ~~-----~~~~l~~~G~~v~~  274 (357)
                      ..     ....|+++-.+...
T Consensus        86 ~~vy~~~I~p~lk~g~~L~Fa  106 (182)
T d1np3a2          86 GRLYKEEIEPNLKKGATLAFA  106 (182)
T ss_dssp             HHHHHHHTGGGCCTTCEEEES
T ss_pred             HHHHHHhhhhhcCCCcEEEEe
Confidence            23     33446666555543

>d2fcaa1 c.66.1.53 (A:10-213) tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TrmB-like
domain: tRNA (guanine-N(7)-)-methyltransferase TrmB
species: Bacillus subtilis [TaxId: 1423]

Probab=83.53  E-value=7.4  Score=29.84  Aligned_cols=105  Identities=14%  Similarity=0.055  Sum_probs=63.2

Q ss_pred             hhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHc-CCeEEEEeCCcHHHHHHHH---hcCCcEE--EcCCChhHH
Q 018382          165 GVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAM-GHHVTVISSSDKKRVEAME---HLGADQY--LVSSDATRM  238 (357)
Q Consensus       165 ~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~-g~~V~~~~~~~~~~~~~~~---~~g~~~v--v~~~~~~~~  238 (357)
                      +-.-|.+++.    .++..||=+|+| .|..++.+|+.. +..+++++.+......+.+   +.|.+.+  +..+.....
T Consensus        18 ~~~~w~~~F~----~~~PlvLeIGcG-~G~~~~~lA~~~p~~~~iGiD~~~~~i~~a~~~~~~~~l~Nv~~~~~Da~~l~   92 (204)
T d2fcaa1          18 YKGKWNTVFG----NDNPIHIEVGTG-KGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLT   92 (204)
T ss_dssp             GTTCHHHHHT----SCCCEEEEECCT-TSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHH
T ss_pred             HHhHHHHHcC----CCCceEEEEEec-CcHHHHHHHHhCCCCcEEEeecchHHHHHHHHHHHHHhccCchhcccchhhhh
Confidence            3344655543    233445556875 378888889876 5699999988887655433   3565432  322222233


Q ss_pred             HHhh-CCccEEEEcCCCC--------------CChHHHHhccccCCeEEEE
Q 018382          239 QEAA-DSLDYIIDTVPAN--------------HPLEPYLSLLKLDGKLILT  274 (357)
Q Consensus       239 ~~~~-~~~d~v~d~~g~~--------------~~~~~~~~~l~~~G~~v~~  274 (357)
                      .... +.+|.|+-....+              ..++.+.+.|+|+|.+...
T Consensus        93 ~~~~~~~~d~v~i~fp~P~~k~~h~k~Rl~~~~~l~~~~r~LkpgG~l~i~  143 (204)
T d2fcaa1          93 DVFEPGEVKRVYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFK  143 (204)
T ss_dssp             HHCCTTSCCEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEE
T ss_pred             cccCchhhhccccccccccchhhhcchhhhHHHHHHHHHHhCCCCcEEEEE
Confidence            3232 3688776544332              2456677899999998775

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=83.11  E-value=0.94  Score=31.68  Aligned_cols=36  Identities=19%  Similarity=0.013  Sum_probs=28.4

Q ss_pred             CCCCeEEEEecChHHHHHHHHHHHcC---CeEEEEeCCc
Q 018382          179 QSGLRGGILGLGGVGHMGVLIAKAMG---HHVTVISSSD  214 (357)
Q Consensus       179 ~~~~~VlI~G~g~~G~~ai~la~~~g---~~V~~~~~~~  214 (357)
                      +..++++|+|+|.+|.=++..++.++   .+|+++.+.+
T Consensus        18 ~~p~~v~ivGgG~ig~E~A~~l~~l~~~~~~Vtli~~~~   56 (117)
T d1aoga2          18 EPPRRVLTVGGGFISVEFAGIFNAYKPKDGQVTLCYRGE   56 (117)
T ss_dssp             SCCSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSS
T ss_pred             hcCCeEEEECCcHHHHHHHHHhhhcccCCcEEEEEeccc
Confidence            34578999999999998887777665   4698888653

>d1vl6a1 c.2.1.7 (A:155-376) Malate oxidoreductase (malic enzyme) {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Malate oxidoreductase (malic enzyme)
species: Thermotoga maritima [TaxId: 2336]

Probab=82.97  E-value=1.6  Score=34.34  Aligned_cols=109  Identities=12%  Similarity=0.080  Sum_probs=62.0

Q ss_pred             hhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCC--------cHHHHHHHHhcCCcEEEcCCChhHHH
Q 018382          169 FSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSS--------DKKRVEAMEHLGADQYLVSSDATRMQ  239 (357)
Q Consensus       169 ~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~--------~~~~~~~~~~~g~~~vv~~~~~~~~~  239 (357)
                      ..+++..++--...++++.|+|..|...++++...+. +++.+++.        +......+..+.... -.......+.
T Consensus        14 l~a~~~~g~~l~d~riv~~GAGsAg~gia~~l~~~~~~~i~~~D~~GLi~~~r~~~~~~~~~~~~~~~~-~~~~~~~~l~   92 (222)
T d1vl6a1          14 LNALKLTEKKIEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKGILNENDPETCLNEYHLEIARIT-NPERLSGDLE   92 (222)
T ss_dssp             HHHHHHHTCCTTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTSGGGCSSHHHHHHHHTS-CTTCCCSCHH
T ss_pred             HHHHHHhCCChhhcEEEEEChHHHHHHHHHHHHHhcccceEeecceeEEEcCcccccccHHHHHHHhhh-cchhhhcchH
Confidence            4455555553467889999999999999999988887 88888754        111111111111000 0000111233


Q ss_pred             HhhCCccEEEEcCCCCCChHHHHhccccCCeEEEEccCC
Q 018382          240 EAADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVIN  278 (357)
Q Consensus       240 ~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~  278 (357)
                      +...+.+++.-.....-......+.+.+.-.+.-++++.
T Consensus        93 ~~l~g~~~~~g~~~~~~~~~e~m~~~~~rPIIFpLSNPt  131 (222)
T d1vl6a1          93 TALEGADFFIGVSRGNILKPEWIKKMSRKPVIFALANPV  131 (222)
T ss_dssp             HHHTTCSEEEECSCSSCSCHHHHTTSCSSCEEEECCSSS
T ss_pred             hhccCcceeccccccccccHHHHhhcCCCCEEEecCCCc
Confidence            444577777766655423345666777766666666654

>d3lada1 c.3.1.5 (A:1-158,A:278-348) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=82.95  E-value=0.63  Score=36.36  Aligned_cols=30  Identities=17%  Similarity=0.289  Sum_probs=27.0

Q ss_pred             EEEEecChHHHHHHHHHHHcCCeEEEEeCC
Q 018382          184 GGILGLGGVGHMGVLIAKAMGHHVTVISSS  213 (357)
Q Consensus       184 VlI~G~g~~G~~ai~la~~~g~~V~~~~~~  213 (357)
                      |+|+|+|+.|+.++..|...|.+|.++...
T Consensus         6 viIIGgGpAGl~aA~~aar~G~~V~viE~~   35 (229)
T d3lada1           6 VIVIGAGPGGYVAAIKSAQLGLKTALIEKY   35 (229)
T ss_dssp             EEEECCSHHHHHHHHHHHHHTCCEEEEECC
T ss_pred             EEEECcCHHHHHHHHHHHHCCCeEEEEecc
Confidence            788899999999999999999999999754

>d1qo8a2 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=82.20  E-value=0.58  Score=39.15  Aligned_cols=31  Identities=26%  Similarity=0.422  Sum_probs=27.3

Q ss_pred             eEEEEecChHHHHHHHHHHHcCCeEEEEeCC
Q 018382          183 RGGILGLGGVGHMGVLIAKAMGHHVTVISSS  213 (357)
Q Consensus       183 ~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~  213 (357)
                      -|+|+|+|..|+.++.-|...|++|+++...
T Consensus        21 DVvVIGaG~aGl~AA~~aa~~G~~V~vlEK~   51 (317)
T d1qo8a2          21 QVLVVGAGSAGFNASLAAKKAGANVILVDKA   51 (317)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHTCCEEEECSS
T ss_pred             CEEEECcCHHHHHHHHHHHHCCCcEEEEeCC
Confidence            3889999999999988888889999999754

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=82.15  E-value=5.4  Score=29.38  Aligned_cols=70  Identities=19%  Similarity=0.291  Sum_probs=45.0

Q ss_pred             CeEEEEecChHHHHHHHHHHHcCC--eEEEEeCCcHHHH-HHHH------hcCCcEEEcCCChhHHHHhhCCccEEEEcC
Q 018382          182 LRGGILGLGGVGHMGVLIAKAMGH--HVTVISSSDKKRV-EAME------HLGADQYLVSSDATRMQEAADSLDYIIDTV  252 (357)
Q Consensus       182 ~~VlI~G~g~~G~~ai~la~~~g~--~V~~~~~~~~~~~-~~~~------~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~  252 (357)
                      .+|.|+|+|.+|...+..+...+.  +++.++.++++.. ++.+      .++...++...+.    +...+.|+|+-++
T Consensus        20 ~KI~IIGaG~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d~----~~~~~adivvita   95 (159)
T d2ldxa1          20 CKITVVGVGDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKDY----NVSANSKLVIITA   95 (159)
T ss_dssp             CEEEEECCSHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESSG----GGGTTEEEEEECC
T ss_pred             CeEEEECCCHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccch----hhhccccEEEEec
Confidence            579999999999999988888775  7888887766543 2211      1122222222221    1235789999888


Q ss_pred             CCC
Q 018382          253 PAN  255 (357)
Q Consensus       253 g~~  255 (357)
                      |..
T Consensus        96 g~~   98 (159)
T d2ldxa1          96 GAR   98 (159)
T ss_dssp             SCC
T ss_pred             ccc
Confidence            774

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=81.93  E-value=1.9  Score=36.76  Aligned_cols=31  Identities=23%  Similarity=0.310  Sum_probs=24.7

Q ss_pred             CCeEEEEec-ChHHHHHHH-HHHHcCCeEEEEe
Q 018382          181 GLRGGILGL-GGVGHMGVL-IAKAMGHHVTVIS  211 (357)
Q Consensus       181 ~~~VlI~G~-g~~G~~ai~-la~~~g~~V~~~~  211 (357)
                      +-+|||+|+ |-+|..++. |++..|.+|++++
T Consensus         2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D   34 (383)
T d1gy8a_           2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVD   34 (383)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEE
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEe
Confidence            347999987 999988765 5567789999886

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.73  E-value=1.6  Score=38.19  Aligned_cols=32  Identities=22%  Similarity=0.286  Sum_probs=27.7

Q ss_pred             CCeEEEEecChHHHHHHHHHHHcCC-eEEEEeC
Q 018382          181 GLRGGILGLGGVGHMGVLIAKAMGH-HVTVISS  212 (357)
Q Consensus       181 ~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~  212 (357)
                      +.+|||+|+|++|.-++..+-..|. ++++++.
T Consensus        37 ~~kVlvvG~GglG~ei~k~L~~~Gvg~i~lvD~   69 (426)
T d1yovb1          37 TCKVLVIGAGGLGCELLKNLALSGFRQIHVIDM   69 (426)
T ss_dssp             HCCEEEECSSTTHHHHHHHHHTTTCCCEEEECC
T ss_pred             cCeEEEECCCHHHHHHHHHHHHcCCCeEEEEEC
Confidence            4679999999999999998888999 7888764

>d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Salmonella typhimurium [TaxId: 90371]

Probab=81.58  E-value=0.36  Score=36.93  Aligned_cols=91  Identities=15%  Similarity=0.087  Sum_probs=51.6

Q ss_pred             eEEEEec-ChHHHHHHHHHHHc-CCeEEEEeCCc------HHHHHHHHhc-CC--cEEEcCCChhHHHHhhCCccEEEEc
Q 018382          183 RGGILGL-GGVGHMGVLIAKAM-GHHVTVISSSD------KKRVEAMEHL-GA--DQYLVSSDATRMQEAADSLDYIIDT  251 (357)
Q Consensus       183 ~VlI~G~-g~~G~~ai~la~~~-g~~V~~~~~~~------~~~~~~~~~~-g~--~~vv~~~~~~~~~~~~~~~d~v~d~  251 (357)
                      +|.|+|+ |-+|+-+++++... ..++..+....      ++.......+ +.  .......+   .......+|++|-+
T Consensus         3 kVaIiGATGyvG~eLlrlL~~HP~~ei~~l~~~s~~~~aGk~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~dvvf~a   79 (179)
T d2g17a1           3 NTLIVGASGYAGAELVSYVNRHPHMTITALTVSAQSNDAGKLISDLHPQLKGIVDLPLQPMSD---VRDFSADVDVVFLA   79 (179)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTCBHHHHCGGGTTTCCCBEEEESC---GGGTCTTCCEEEEC
T ss_pred             EEEEECcccHHHHHHHHHHHhCCCCceEeeEeecccccccccccccccccccccccccccchh---hhhhhcccceeecc
Confidence            6899998 99999999999887 45665443211      1111111111 11  01111111   11223479999999


Q ss_pred             CCCCCChHHHHhccccCCeEEEEcc
Q 018382          252 VPANHPLEPYLSLLKLDGKLILTGV  276 (357)
Q Consensus       252 ~g~~~~~~~~~~~l~~~G~~v~~g~  276 (357)
                      .+.....+.....+..+-++++.+.
T Consensus        80 lp~~~s~~~~~~~~~~~~~vIDlSa  104 (179)
T d2g17a1          80 TAHEVSHDLAPQFLQAGCVVFDLSG  104 (179)
T ss_dssp             SCHHHHHHHHHHHHHTTCEEEECSS
T ss_pred             ccchhHHHHhhhhhhcCceeecccc
Confidence            9887344455555666667777754

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=81.46  E-value=1.8  Score=31.81  Aligned_cols=72  Identities=11%  Similarity=0.028  Sum_probs=45.3

Q ss_pred             CCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhc-------CCc-EEEcCCChhHHHHhhCCccEEEE
Q 018382          180 SGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHL-------GAD-QYLVSSDATRMQEAADSLDYIID  250 (357)
Q Consensus       180 ~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~-------g~~-~vv~~~~~~~~~~~~~~~d~v~d  250 (357)
                      |..+|.|+|+|.+|...+.++...+. ++...+..+++.+-....+       +.. .+....+.    +...+.|+|+-
T Consensus         2 p~~KI~IIGaG~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~~~----~~~~~advvvi   77 (150)
T d1t2da1           2 PKAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTY----DDLAGADVVIV   77 (150)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCG----GGGTTCSEEEE
T ss_pred             CCCeEEEECCCHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecccc----cccCCCcEEEE
Confidence            45689999999999988888887776 8888887776543221111       111 11111111    23357999998


Q ss_pred             cCCCC
Q 018382          251 TVPAN  255 (357)
Q Consensus       251 ~~g~~  255 (357)
                      +.|..
T Consensus        78 tag~~   82 (150)
T d1t2da1          78 TAGFT   82 (150)
T ss_dssp             CCSCS
T ss_pred             ecccc
Confidence            88854

>d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Adrenodoxin reductase of mitochondrial p450 systems
species: Cow (Bos taurus) [TaxId: 9913]

Probab=81.42  E-value=0.76  Score=36.23  Aligned_cols=33  Identities=15%  Similarity=0.104  Sum_probs=26.6

Q ss_pred             CeEEEEecChHHHHHHHHHHH--cCCeEEEEeCCc
Q 018382          182 LRGGILGLGGVGHMGVLIAKA--MGHHVTVISSSD  214 (357)
Q Consensus       182 ~~VlI~G~g~~G~~ai~la~~--~g~~V~~~~~~~  214 (357)
                      .+|+|+|+|+.|+.++..+..  .|.+|++....+
T Consensus         2 ~kv~iIGaGpaGl~aA~~L~~~~~~~~V~v~e~~~   36 (230)
T d1cjca2           2 PQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQL   36 (230)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSS
T ss_pred             CeEEEECccHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence            379999999999999886644  477999987664

>d1z7wa1 c.79.1.1 (A:3-322) O-acetylserine sulfhydrylase (Cysteine synthase) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=81.40  E-value=5.1  Score=33.18  Aligned_cols=100  Identities=17%  Similarity=0.196  Sum_probs=60.7

Q ss_pred             cCCCCCCCeEEEE-ecChHHHHHHHHHHHcCCeEEEEeCC---cHHHHHHHHhcCCcEEEcCCC----------------
Q 018382          175 FGLKQSGLRGGIL-GLGGVGHMGVLIAKAMGHHVTVISSS---DKKRVEAMEHLGADQYLVSSD----------------  234 (357)
Q Consensus       175 ~~~~~~~~~VlI~-G~g~~G~~ai~la~~~g~~V~~~~~~---~~~~~~~~~~~g~~~vv~~~~----------------  234 (357)
                      .+.++++...+|. .+|..|.+++..++.+|.+++++.+.   ..+.+.++. +|++.++....                
T Consensus        58 ~g~~~~~~~~vv~aSsGN~g~a~A~~a~~~g~~~~iv~p~~~~~~k~~~i~~-~Ga~vi~~~~~~~~~~~~~~~~~~~~~  136 (320)
T d1z7wa1          58 KGLIKPGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSTERRIILLA-FGVELVLTDPAKGMKGAIAKAEEILAK  136 (320)
T ss_dssp             TTSCCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHH-TTCEEEEECGGGHHHHHHHHHHHHHHH
T ss_pred             cCCCCCCCceEEeeCCchHHHHHHHHHHhhccceEEeehhhhhhhhhhhhhc-cCcceEEeeccccccccchhHHHHHHh
Confidence            3444566566665 55999999999999999976665532   335555555 99875532110                


Q ss_pred             ------------h------------hHHHHhhCCccEEEEcCCCCCChH---HHHhccccCCeEEEEc
Q 018382          235 ------------A------------TRMQEAADSLDYIIDTVPANHPLE---PYLSLLKLDGKLILTG  275 (357)
Q Consensus       235 ------------~------------~~~~~~~~~~d~v~d~~g~~~~~~---~~~~~l~~~G~~v~~g  275 (357)
                                  +            +..+++.+.+|+++-++|+..++.   ..++...+.-+++.+.
T Consensus       137 ~~~~~~~~~~~~~~n~~~g~~t~~~EI~~q~~~~~D~vv~~vGgGg~~~Gi~~~~k~~~~~~~~igve  204 (320)
T d1z7wa1         137 TPNGYMLQQFENPANPKIHYETTGPEIWKGTGGKIDGFVSGIGTGGTITGAGKYLKEQNANVKLYGVE  204 (320)
T ss_dssp             CTTEEECCTTTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred             CCCceecccccccchHHHhhhhHHHHHHHhccCCCCEEEeCCCCCcccchhhhhhhhhhcceeeeccc
Confidence                        0            011122235899999999874443   3444455666766553

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=81.22  E-value=1.2  Score=33.73  Aligned_cols=88  Identities=23%  Similarity=0.238  Sum_probs=49.8

Q ss_pred             eEEEEec-ChHHHHHHHHHHHcC-CeEEEEeCCcHHHHHHHHhcC---CcEEEcCCChhHHHHhhCCccEEEEcCCCCCC
Q 018382          183 RGGILGL-GGVGHMGVLIAKAMG-HHVTVISSSDKKRVEAMEHLG---ADQYLVSSDATRMQEAADSLDYIIDTVPANHP  257 (357)
Q Consensus       183 ~VlI~G~-g~~G~~ai~la~~~g-~~V~~~~~~~~~~~~~~~~~g---~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~  257 (357)
                      +|.|+|+ |-+|.-+++++...- .++..+.++...-..+.+.+.   .+..+...+.   +.+....|++|-+.+.. .
T Consensus         3 kVaIvGATGyvG~eLirlL~~HP~~ei~~l~s~~~aG~~i~~~~p~~~~~~~~~~~~~---~~~~~~~dvvf~a~p~~-~   78 (176)
T d1vkna1           3 RAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYAGKKLEEIFPSTLENSILSEFDP---EKVSKNCDVLFTALPAG-A   78 (176)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTTTTSBHHHHCGGGCCCCBCBCCCH---HHHHHHCSEEEECCSTT-H
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCCceEEEeeccccCCCcccccCchhhccccccccCH---hHhccccceEEEccccH-H
Confidence            5889998 999999999998654 476666544332222222111   1112222222   22334799999999987 3


Q ss_pred             hHHHHhccccCCeEEEEc
Q 018382          258 LEPYLSLLKLDGKLILTG  275 (357)
Q Consensus       258 ~~~~~~~l~~~G~~v~~g  275 (357)
                      ....... ..+-++++++
T Consensus        79 s~~~~~~-~~~~~VIDlS   95 (176)
T d1vkna1          79 SYDLVRE-LKGVKIIDLG   95 (176)
T ss_dssp             HHHHHTT-CCSCEEEESS
T ss_pred             HHHHHHh-hccceEEecC
Confidence            3333333 2455666664

>d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella putrefaciens [TaxId: 24]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella putrefaciens [TaxId: 24]

Probab=81.00  E-value=0.68  Score=38.73  Aligned_cols=30  Identities=27%  Similarity=0.457  Sum_probs=27.2

Q ss_pred             EEEEecChHHHHHHHHHHHcCCeEEEEeCC
Q 018382          184 GGILGLGGVGHMGVLIAKAMGHHVTVISSS  213 (357)
Q Consensus       184 VlI~G~g~~G~~ai~la~~~g~~V~~~~~~  213 (357)
                      |+|+|+|..|+.++.-|...|++|+++...
T Consensus        26 VvVIG~G~aGl~aA~~la~~G~~V~llEk~   55 (322)
T d1d4ca2          26 VVIIGSGGAGLAAAVSARDAGAKVILLEKE   55 (322)
T ss_dssp             EEEECSSHHHHHHHHHHHTTTCCEEEECSS
T ss_pred             EEEECcCHHHHHHHHHHHHCCCcEEEEeCC
Confidence            899999999999988888889999999864

>d1lqta2 c.4.1.1 (A:2-108,A:325-456) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Ferredoxin:NADP reductase FprA
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=80.90  E-value=0.56  Score=37.04  Aligned_cols=33  Identities=12%  Similarity=0.062  Sum_probs=26.7

Q ss_pred             CeEEEEecChHHHHHHHHHHHcC-------CeEEEEeCCc
Q 018382          182 LRGGILGLGGVGHMGVLIAKAMG-------HHVTVISSSD  214 (357)
Q Consensus       182 ~~VlI~G~g~~G~~ai~la~~~g-------~~V~~~~~~~  214 (357)
                      .+|+|+|+|+.|++++..+...|       .+|++....+
T Consensus         3 ~~VaVIGaGpaGL~aA~~L~~~G~~~~~~~~~V~v~E~~~   42 (239)
T d1lqta2           3 YYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLP   42 (239)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSS
T ss_pred             cEEEEECcCHHHHHHHHHHHHcCCccccCCCceEEEecCC
Confidence            37999999999999998877666       5788887654

>d1h6va1 c.3.1.5 (A:10-170,A:293-366) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=80.64  E-value=0.7  Score=36.50  Aligned_cols=29  Identities=24%  Similarity=0.172  Sum_probs=26.6

Q ss_pred             EEEEecChHHHHHHHHHHHcCCeEEEEeC
Q 018382          184 GGILGLGGVGHMGVLIAKAMGHHVTVISS  212 (357)
Q Consensus       184 VlI~G~g~~G~~ai~la~~~g~~V~~~~~  212 (357)
                      |+|+|+|+.|+.++..|...|.+|.++..
T Consensus         6 viVIG~GpaGl~aA~~aa~~G~kV~viE~   34 (235)
T d1h6va1           6 LIIIGGGSGGLAAAKEAAKFDKKVMVLDF   34 (235)
T ss_dssp             EEEECCSHHHHHHHHHHGGGCCCEEEECC
T ss_pred             EEEECCCHHHHHHHHHHHHCCCeEEEEec
Confidence            78899999999999999999999999974

>d1qzza2 c.66.1.12 (A:102-357) Aclacinomycin-10-hydroxylase RdmB {Streptomyces purpurascens [TaxId: 1924]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Plant O-methyltransferase, C-terminal domain
domain: Aclacinomycin-10-hydroxylase RdmB
species: Streptomyces purpurascens [TaxId: 1924]

Probab=80.52  E-value=0.72  Score=37.41  Aligned_cols=94  Identities=16%  Similarity=0.094  Sum_probs=56.4

Q ss_pred             CCCCCeEEEEecChHHHHHHHHHHHc-CCeEEEEeCCcHHHHHHHH---hcCC-cE--EEcCCChhHHHHhhCCccEEEE
Q 018382          178 KQSGLRGGILGLGGVGHMGVLIAKAM-GHHVTVISSSDKKRVEAME---HLGA-DQ--YLVSSDATRMQEAADSLDYIID  250 (357)
Q Consensus       178 ~~~~~~VlI~G~g~~G~~ai~la~~~-g~~V~~~~~~~~~~~~~~~---~~g~-~~--vv~~~~~~~~~~~~~~~d~v~d  250 (357)
                      +....+||=+|+|. |..++.+++.. +.++++.+.+ +..+.+++   ..|. +.  ++..   +.......++|+++-
T Consensus        79 ~~~~~~vlDvG~G~-G~~~~~l~~~~P~~~~~~~Dlp-~~~~~a~~~~~~~~~~~ri~~~~~---d~~~~~p~~~D~v~~  153 (256)
T d1qzza2          79 WSAVRHVLDVGGGN-GGMLAAIALRAPHLRGTLVELA-GPAERARRRFADAGLADRVTVAEG---DFFKPLPVTADVVLL  153 (256)
T ss_dssp             CTTCCEEEEETCTT-SHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHTTCTTTEEEEEC---CTTSCCSCCEEEEEE
T ss_pred             CccCCEEEEECCCC-CHHHHHHHHhhcCcEEEEecCh-HHHHHHHHHHhhcCCcceeeeeee---eccccccccchhhhc
Confidence            46677888888753 67888899877 5699988863 33333322   2342 21  2211   112223347898874


Q ss_pred             cC-----CCC---CChHHHHhccccCCeEEEEcc
Q 018382          251 TV-----PAN---HPLEPYLSLLKLDGKLILTGV  276 (357)
Q Consensus       251 ~~-----g~~---~~~~~~~~~l~~~G~~v~~g~  276 (357)
                      .-     ...   ..++.+.+.|+|+|+++.+..
T Consensus       154 ~~vLh~~~d~~~~~lL~~i~~~LkpgG~llI~d~  187 (256)
T d1qzza2         154 SFVLLNWSDEDALTILRGCVRALEPGGRLLVLDR  187 (256)
T ss_dssp             ESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred             cccccccCcHHHHHHHHHHHhhcCCcceeEEEEe
Confidence            21     111   135667888999999988754

>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methyltransferase SPy1538
species: Streptococcus pyogenes [TaxId: 1314]

Probab=80.22  E-value=2.8  Score=30.59  Aligned_cols=68  Identities=15%  Similarity=0.082  Sum_probs=42.8

Q ss_pred             CCCCeEEEEec--ChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHH---hcCC---cEEEcCCChhHHHHhhCCccEEE
Q 018382          179 QSGLRGGILGL--GGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAME---HLGA---DQYLVSSDATRMQEAADSLDYII  249 (357)
Q Consensus       179 ~~~~~VlI~G~--g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~---~~g~---~~vv~~~~~~~~~~~~~~~d~v~  249 (357)
                      -.|.+||=+++  |.+|+.+   + ..|+ +|+.+..+.+..+.+++   .++.   ..++..+...+++...+.+|+||
T Consensus        13 ~~g~~vlDl~~GtG~~~iea---~-~rga~~v~~ve~~~~a~~~~~~n~~~~~~~~~~~ii~~D~~~~l~~~~~~fDiIf   88 (152)
T d2esra1          13 FNGGRVLDLFAGSGGLAIEA---V-SRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCLTGRFDLVF   88 (152)
T ss_dssp             CCSCEEEEETCTTCHHHHHH---H-HTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHBCSCEEEEE
T ss_pred             CCCCeEEEcCCccCHHHHHH---H-HhCcceeeeehhchhhhhhhhhhhhhcccccchhhhcccccccccccccccceeE
Confidence            36888888854  6666533   3 3577 89999988776554443   3453   23444433445556667899997


Q ss_pred             E
Q 018382          250 D  250 (357)
Q Consensus       250 d  250 (357)
                      -
T Consensus        89 ~   89 (152)
T d2esra1          89 L   89 (152)
T ss_dssp             E
T ss_pred             e
Confidence            4

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=80.22  E-value=0.21  Score=36.88  Aligned_cols=88  Identities=15%  Similarity=0.086  Sum_probs=51.8

Q ss_pred             CeEEEEec-ChHHHHHHHHHHHcC---CeEEEEeCCcHHHHHHHHhcCCcEEEcCCC---hhHHHHhhCCccEEEEcCCC
Q 018382          182 LRGGILGL-GGVGHMGVLIAKAMG---HHVTVISSSDKKRVEAMEHLGADQYLVSSD---ATRMQEAADSLDYIIDTVPA  254 (357)
Q Consensus       182 ~~VlI~G~-g~~G~~ai~la~~~g---~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~---~~~~~~~~~~~d~v~d~~g~  254 (357)
                      -+|.|+|+ |-+|+-+++++...+   .++..+.++..        -|...-....+   .+.......+.|++|-+.+.
T Consensus         3 mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~~--------~Gk~i~~~~~~~~~~~~~~~~~~~~d~vf~a~p~   74 (144)
T d2hjsa1           3 LNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAES--------AGQRMGFAESSLRVGDVDSFDFSSVGLAFFAAAA   74 (144)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTT--------TTCEEEETTEEEECEEGGGCCGGGCSEEEECSCH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeeccc--------CCcceeeccccchhccchhhhhccceEEEecCCc
Confidence            36899998 999999999996443   47776665422        22111110000   00001112379999999988


Q ss_pred             CCChHHHHhccccCCeEEEEccC
Q 018382          255 NHPLEPYLSLLKLDGKLILTGVI  277 (357)
Q Consensus       255 ~~~~~~~~~~l~~~G~~v~~g~~  277 (357)
                      .......-+....+.++++.+..
T Consensus        75 ~~s~~~~~~~~~~g~~VID~Ss~   97 (144)
T d2hjsa1          75 EVSRAHAERARAAGCSVIDLSGA   97 (144)
T ss_dssp             HHHHHHHHHHHHTTCEEEETTCT
T ss_pred             chhhhhccccccCCceEEeechh
Confidence            73444555556667777776553

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=80.08  E-value=0.85  Score=37.57  Aligned_cols=31  Identities=29%  Similarity=0.256  Sum_probs=25.9

Q ss_pred             eEEEEecChHHHHHHHHHHHcCC-eEEEEeCC
Q 018382          183 RGGILGLGGVGHMGVLIAKAMGH-HVTVISSS  213 (357)
Q Consensus       183 ~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~  213 (357)
                      .|+|+|+|.+|++++.-+...|. +|+++.++
T Consensus         3 dViIIGaGi~G~s~A~~La~~G~~~V~liE~~   34 (305)
T d1pj5a2           3 RIVIIGAGIVGTNLADELVTRGWNNITVLDQG   34 (305)
T ss_dssp             CEEEECCSHHHHHHHHHHHHTTCCCEEEECSS
T ss_pred             CEEEECcCHHHHHHHHHHHHcCCCcEEEEeCC
Confidence            59999999999987777767787 69998765

>d2bs2a2 c.3.1.4 (A:1-250,A:372-457) Fumarate reductase {Wolinella succinogenes [TaxId: 844]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Fumarate reductase
species: Wolinella succinogenes [TaxId: 844]

Probab=80.03  E-value=0.76  Score=38.52  Aligned_cols=30  Identities=20%  Similarity=0.223  Sum_probs=27.1

Q ss_pred             EEEEecChHHHHHHHHHHHcCCeEEEEeCC
Q 018382          184 GGILGLGGVGHMGVLIAKAMGHHVTVISSS  213 (357)
Q Consensus       184 VlI~G~g~~G~~ai~la~~~g~~V~~~~~~  213 (357)
                      |+|+|+|..|+.++.-|...|++|+++...
T Consensus         8 VvVIG~G~AGl~AAl~aa~~G~~V~liEK~   37 (336)
T d2bs2a2           8 SLVIGGGLAGLRAAVATQQKGLSTIVLSLI   37 (336)
T ss_dssp             EEEECCSHHHHHHHHHHHTTTCCEEEECSS
T ss_pred             EEEECcCHHHHHHHHHHHHCCCCEEEEecC
Confidence            899999999999998888889999999754

>d1tdja1 c.79.1.1 (A:5-335) Threonine deaminase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Threonine deaminase
species: Escherichia coli [TaxId: 562]

Probab=80.03  E-value=4  Score=34.00  Aligned_cols=107  Identities=13%  Similarity=0.090  Sum_probs=63.5

Q ss_pred             hhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCC---cHHHHHHHHhcCCcEEEcCCChh--------
Q 018382          168 VFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSS---DKKRVEAMEHLGADQYLVSSDAT--------  236 (357)
Q Consensus       168 a~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~---~~~~~~~~~~~g~~~vv~~~~~~--------  236 (357)
                      |++++..+..-.+...|+.-.+|..|.+++..++..|.+++++...   ..+...++. +|++-+....+.+        
T Consensus        62 a~~~i~~~~~~~~~~~vv~assGN~g~a~A~~a~~~g~~~~i~~p~~~~~~k~~~l~~-~Ga~vi~~~~~~~~~~~~~~~  140 (331)
T d1tdja1          62 AYAMMAGLTEEQKAHGVITASAGNHAQGVAFSSARLGVKALIVMPTATADIKVDAVRG-FGGEVLLHGANFDEAKAKAIE  140 (331)
T ss_dssp             HHHHHHTTTTSSCSSSCEEEECSSSHHHHHHHHHHTTCCEEEECCSSCCHHHHHHHHH-HSCEEECCCSSHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCeeeecccchhHHHHHHhhccccccceeeccccchhHHHHHHHh-cCCEEEEcCcccccchhhhhh
Confidence            3444444443234455555566888999999999999977776533   234444444 8987654222110        


Q ss_pred             -----------------H-------HHHh---hCCccEEEEcCCCCCChH---HHHhccccCCeEEEEc
Q 018382          237 -----------------R-------MQEA---ADSLDYIIDTVPANHPLE---PYLSLLKLDGKLILTG  275 (357)
Q Consensus       237 -----------------~-------~~~~---~~~~d~v~d~~g~~~~~~---~~~~~l~~~G~~v~~g  275 (357)
                                       .       ..++   ...+|+||-++|+...+.   ..++.+.+..+++.+.
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~q~~~~D~vv~~~G~GG~~aG~~~~~~~~~~~~~ii~ve  209 (331)
T d1tdja1         141 LSQQQGFTWVPPFDHPMVIAGQGTLALELLQQDAHLDRVFVPVGGGGLAAGVAVLIKQLMPQIKVIAVE  209 (331)
T ss_dssp             HHHHHCCEECCSSCCHHHHHHHHHHHHHHHHHCTTCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred             hhhcCCCccccccCChHHhhhhhhHHHHHHHhcCCCCEEEEeCChhHHHHHHHHHHHHhCCCcEEEEec
Confidence                             0       0111   125999999999874443   3445556677777664