Citrus Sinensis ID: 018422


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350------
MSSAIANGLAGAGGGIIAQIITYPLQTVNTRQQTERIAKKGLPNCPAAASSSTLRQILEVIKTEGWGGLYSGLKPSLVGTAASQGIYYYFYQLFKNKAEAFVVAREARGRGDGSVGMFSWLIVAALAGSLNVLLTNPIWVLVTRMQTHTQAERKIMEGKREALVKEALESSTGSTLQDKLAELDLIKPRPYGTFPAAREVYNETGVAGFWKGIIPTLIMVCNPSIQFMIYEGSLKHLRSKRAANKHGLKNVSALEVFLLGALAKLGATVSTYPLLVVKSRLQAKQEIGRNISLRYSGTLDAIIKMIHYEGLPGFYKGMSTKIVQSVFAASILFMVKEELVKAYMALAVKSQKVLAR
ccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHcccccccHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHccHHHHHHHHccccccccccccccccHHHHHHHHHHHHcHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
ccHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHcccccccccccccHHHccHHHHHHHHHHHccccHHcccccHHHHHHcHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHccccccccccccHHHHccccccccccccccccccccccccccccHHHHHHHHHHHcccHHHHccccHHHccccHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHcccccccccccccHHHHHHHHHHHHcccHEEEccccHHHHHHcHHHHHHHHHHHHHHHHHHHcccccccHccc
MSSAIanglagagggIIAQIITYPLQTVNTRQQTERIakkglpncpaaassSTLRQILEVIKtegwgglysglkpslvgtaASQGIYYYFYQLFKNKAEAFVVAREargrgdgsvGMFSWLIVAALAGSLNVLLTNPIWVLVTRMQTHTQAERKIMEGKREALVKEALesstgstlQDKLAeldlikprpygtfpaarevynetgvagfwkgiIPTLIMVCNPSIQFMIYEGSLKHLRSKRAANKHGLKNVSALEVFLLGALAKLGATVSTYPLLVVKSRLQAKQEIGRNISLRYSGTLDAIIKMIHYeglpgfykgMSTKIVQSVFAASILFMVKEELVKAYMALAVKSQKVLAR
MSSAIANGLAGAGGGIIAQIITYPLQTVNTRQQTERIakkglpncpaaassSTLRQILEVIKTEGWGGLYSGLKPSLVGTAASQGIYYYFYQLFKNKAEAFVVAREARGRGDGSVGMFSWLIVAALAGSLNVLLTNPIWVLVTRMQTHTQAERKIMEGKREALVKEAlesstgstlqdklaeldliKPRPYGTFPAAREVYNETGVAGFWKGIIPTLIMVCNPSIQFMIYEGSLKHLRSKRAANKHGLKNVSALEVFLLGALAKLGATVSTYPLLVVKSRLQAkqeigrnislrysGTLDAIIKMIHYEGLPGFYKGMSTKIVQSVFAASILFMVKEELVKAYMALAVksqkvlar
MSSaianglagagggiiaqiiTYPLQTVNTRQQTERIAKKGLPNCPAAASSSTLRQILEVIKTEGWGGLYSGLKPSLVGTAASQGIYYYFYQLFKNKAEAFVVAREARGRGDGSVGMFSWLIVAALAGSLNVLLTNPIWVLVTRMQTHTQAERKIMEGKREALVKEALESSTGSTLQDKLAELDLIKPRPYGTFPAAREVYNETGVAGFWKGIIPTLIMVCNPSIQFMIYEGSLKHLRSKRAANKHGLKNVSALEVFLLGALAKLGATVSTYPLLVVKSRLQAKQEIGRNISLRYSGTLDAIIKMIHYEGLPGFYKGMSTKIVQSVFAASILFMVKEELVKAYMALAVKSQKVLAR
******NGLAGAGGGIIAQIITYPLQTVNTRQ*******************STLRQILEVIKTEGWGGLYSGLKPSLVGTAASQGIYYYFYQLFKNKAEAFVVAREARGRGDGSVGMFSWLIVAALAGSLNVLLTNPIWVLVTRMQT********************************LAELDLIKPRPYGTFPAAREVYNETGVAGFWKGIIPTLIMVCNPSIQFMIYEGSLKHLRSKRAANKHGLKNVSALEVFLLGALAKLGATVSTYPLLVVKSRLQAKQEIGRNISLRYSGTLDAIIKMIHYEGLPGFYKGMSTKIVQSVFAASILFMVKEELVKAYMALAVK*******
*SSAIANGLAGAGGGIIAQIITYPLQTVNTRQQ******************STLRQILEVIKTEGWGGLYSGLKPSLVGTAASQGIYYYFYQLFKNKAEAF***************MFSWLIVAALAGSLNVLLTNPIWVLVTRMQT*****************************************RPYGTFPAAREVYNETGVAGFWKGIIPTLIMVCNPSIQFMIYEGSLKHL****************LEVFLLGALAKLGATVSTYPLLVVKS******************TLDAIIKMIHYEGLPGFYKGMSTKIVQSVFAASILFMVKEELVKAYMAL**********
MSSAIANGLAGAGGGIIAQIITYPLQTVNTRQQTERIAKKGLPNCPAAASSSTLRQILEVIKTEGWGGLYSGLKPSLVGTAASQGIYYYFYQLFKNKAEAFVVAREARGRGDGSVGMFSWLIVAALAGSLNVLLTNPIWVLVTRMQTHTQAERKIMEGKREALVK**********LQDKLAELDLIKPRPYGTFPAAREVYNETGVAGFWKGIIPTLIMVCNPSIQFMIYEGSLKHLRSKRAANKHGLKNVSALEVFLLGALAKLGATVSTYPLLVVKSRLQAKQEIGRNISLRYSGTLDAIIKMIHYEGLPGFYKGMSTKIVQSVFAASILFMVKEELVKAYMALAV********
MSSAIANGLAGAGGGIIAQIITYPLQTVNTRQQTERIAKKG**NCPAAASSSTLRQILEVIKTEGWGGLYSGLKPSLVGTAASQGIYYYFYQLFKNKAEAFVVAR******DGSVGMFSWLIVAALAGSLNVLLTNPIWVLVTRMQTHTQ***********************************IKPRPYGTFPAAREVYNETGVAGFWKGIIPTLIMVCNPSIQFMIYEGSLKHLRSKRAANKHGLKNVSALEVFLLGALAKLGATVSTYPLLVVKSRLQAKQEIGRNISLRYSGTLDAIIKMIHYEGLPGFYKGMSTKIVQSVFAASILFMVKEELVKAYMALA*********
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MSSAIANGLAGAGGGIIAQIITYPLQTVNTRQQTERIAKKGLPNCPAAASSSTLRQILEVIKTEGWGGLYSGLKPSLVGTAASQGIYYYFYQLFKNKAEAFVVAREARGRGDGSVGMFSWLIVAALAGSLNVLLTNPIWVLVTRMQTHTQAERKIMEGKREALVKEALESSTGSTLQDKLAELDLIKPRPYGTFPAAREVYNETGVAGFWKGIIPTLIMVCNPSIQFMIYEGSLKHLRSKRAANKHGLKNVSALEVFLLGALAKLGATVSTYPLLVVKSRLQAKQEIGRNISLRYSGTLDAIIKMIHYEGLPGFYKGMSTKIVQSVFAASILFMVKEELVKAYMALAVKSQKVLAR
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query356 2.2.26 [Sep-21-2011]
O04200331 Peroxisomal nicotinamide yes no 0.896 0.963 0.624 1e-106
Q76P23329 Mitochondrial substrate c yes no 0.834 0.902 0.343 2e-42
O43808307 Peroxisomal membrane prot yes no 0.783 0.908 0.303 3e-34
Q7XA87308 Folate transporter 1, chl no no 0.803 0.928 0.306 5e-33
O70579307 Peroxisomal membrane prot yes no 0.806 0.934 0.298 2e-30
Q00319419 Peroxisomal membrane prot N/A no 0.870 0.739 0.279 4e-30
P21245423 Peroxisomal membrane prot N/A no 0.834 0.702 0.263 7e-30
Q9H2D1315 Mitochondrial folate tran no no 0.806 0.911 0.272 5e-28
Q95J75315 Mitochondrial folate tran N/A no 0.806 0.911 0.272 7e-28
Q8RWA5363 Nicotinamide adenine dinu no no 0.75 0.735 0.284 1e-27
>sp|O04200|PXN_ARATH Peroxisomal nicotinamide adenine dinucleotide carrier OS=Arabidopsis thaliana GN=PXN PE=1 SV=1 Back     alignment and function desciption
 Score =  386 bits (991), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 213/341 (62%), Positives = 255/341 (74%), Gaps = 22/341 (6%)

Query: 1   MSSAIANGLAGAGGGIIAQIITYPLQTVNTRQQTERIAKKGLPNCPAAASSSTLRQILEV 60
           MS A+ NGLAGAGGGIIAQ++TYPLQTVNTRQQTER  K+            T+  + +V
Sbjct: 1   MSDALINGLAGAGGGIIAQLLTYPLQTVNTRQQTERDLKR------EKRKLGTIEHMCQV 54

Query: 61  IKTEGWGGLYSGLKPSLVGTAASQGIYYYFYQLFKNKAEAFVVAREARGRGDGSVGMFSW 120
           +K EGW  LY GL PSL GTAASQG+YYYFYQ+F+N+AEA  +AR+ +G GDGSVGMF+ 
Sbjct: 55  VKQEGWERLYGGLAPSLAGTAASQGVYYYFYQVFRNRAEATALARKKKGLGDGSVGMFAS 114

Query: 121 LIVAALAGSLNVLLTNPIWVLVTRMQTHTQAERKIMEGKREALVKEALESSTGSTLQDKL 180
           L+VAA AGS+NVL+TNPIWV+VTRMQTH    RK+ + +  A        S  S  +  +
Sbjct: 115 LLVAAFAGSVNVLMTNPIWVIVTRMQTH----RKMTKDQTAA------PESPSSNAEALV 164

Query: 181 AELDLIKPRPYGTFPAAREVYNETGVAGFWKGIIPTLIMVCNPSIQFMIYEGSLKHLRSK 240
           A    ++PRPYGTF   REVY+E G+ GFWKG+IPTLIMV NPS+QFM+YE  L  L+ K
Sbjct: 165 A----VEPRPYGTFNTIREVYDEAGITGFWKGVIPTLIMVSNPSMQFMLYETMLTKLKKK 220

Query: 241 RAANKHGLKNVSALEVFLLGALAKLGATVSTYPLLVVKSRLQAKQEIGRNISLRYSGTLD 300
           RA    G  NV+ALE FLLGA+AKLGATV+TYPLLVVKSRLQAKQ    +   +Y GTLD
Sbjct: 221 RALK--GSNNVTALETFLLGAVAKLGATVTTYPLLVVKSRLQAKQVTTGDKRQQYKGTLD 278

Query: 301 AIIKMIHYEGLPGFYKGMSTKIVQSVFAASILFMVKEELVK 341
           AI+KMI YEGL GFYKGMSTKIVQSV AA++LFM+KEELVK
Sbjct: 279 AILKMIRYEGLYGFYKGMSTKIVQSVLAAAVLFMIKEELVK 319




Mediates the NAD(+) import into peroxisomes. Favors the NAD(+)(in)/AMP(out) antiport exchange, but is also able to catalyze a low unidirectional transport that might be essential under special conditions. Transports CoA, dephospho-CoA, acetyl-CoA, adenosine 3',5'-diphosphate (PAP), NAD(+), AMP, ADP and NADH, but has no activity with ATP, GTP, GDP, NADPH, NADP(+) or FAD. Required for peroxisomes proliferation.
Arabidopsis thaliana (taxid: 3702)
>sp|Q76P23|PM34_DICDI Mitochondrial substrate carrier family protein Q OS=Dictyostelium discoideum GN=mcfQ PE=2 SV=1 Back     alignment and function description
>sp|O43808|PM34_HUMAN Peroxisomal membrane protein PMP34 OS=Homo sapiens GN=SLC25A17 PE=1 SV=1 Back     alignment and function description
>sp|Q7XA87|FOLT1_ARATH Folate transporter 1, chloroplastic OS=Arabidopsis thaliana GN=FOLT1 PE=2 SV=1 Back     alignment and function description
>sp|O70579|PM34_MOUSE Peroxisomal membrane protein PMP34 OS=Mus musculus GN=Slc25a17 PE=2 SV=1 Back     alignment and function description
>sp|Q00319|PM47B_CANBO Peroxisomal membrane protein PMP47B OS=Candida boidinii GN=PMP47B PE=2 SV=1 Back     alignment and function description
>sp|P21245|PM47A_CANBO Peroxisomal membrane protein PMP47A OS=Candida boidinii GN=PMP47A PE=1 SV=1 Back     alignment and function description
>sp|Q9H2D1|MFTC_HUMAN Mitochondrial folate transporter/carrier OS=Homo sapiens GN=SLC25A32 PE=1 SV=2 Back     alignment and function description
>sp|Q95J75|MFTC_MACFA Mitochondrial folate transporter/carrier OS=Macaca fascicularis GN=SLC25A32 PE=2 SV=1 Back     alignment and function description
>sp|Q8RWA5|NDT2_ARATH Nicotinamide adenine dinucleotide transporter 2, mitochondrial OS=Arabidopsis thaliana GN=NDT2 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query356
224065605367 predicted protein [Populus trichocarpa] 0.943 0.915 0.794 1e-153
359491900355 PREDICTED: mitochondrial substrate carri 0.932 0.935 0.804 1e-152
363807734364 uncharacterized protein LOC100775304 [Gl 0.938 0.917 0.756 1e-146
356532217364 PREDICTED: LOW QUALITY PROTEIN: mitochon 0.938 0.917 0.727 1e-138
413950029364 hypothetical protein ZEAMMB73_608030 [Ze 0.994 0.972 0.691 1e-138
357113317363 PREDICTED: mitochondrial substrate carri 0.994 0.975 0.713 1e-133
215694587363 unnamed protein product [Oryza sativa Ja 0.935 0.917 0.716 1e-132
222641890377 hypothetical protein OsJ_29959 [Oryza sa 0.935 0.883 0.716 1e-131
115480061413 Os09g0508900 [Oryza sativa Japonica Grou 0.935 0.806 0.716 1e-131
242086825364 hypothetical protein SORBIDRAFT_09g00308 0.935 0.914 0.678 1e-127
>gi|224065605|ref|XP_002301880.1| predicted protein [Populus trichocarpa] gi|118486261|gb|ABK94972.1| unknown [Populus trichocarpa] gi|222843606|gb|EEE81153.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  548 bits (1411), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 271/341 (79%), Positives = 300/341 (87%), Gaps = 5/341 (1%)

Query: 19  QIITYPLQTVNTRQQTERI-AKKGLPNCPAAASSST---LRQILEVIKTEGWGGLYSGLK 74
           QIITYPLQTVNTRQQTERI  KK  P  P+  S +T   L QIL+V+++EGWGGLYSGL+
Sbjct: 22  QIITYPLQTVNTRQQTERIDKKKKQPQTPSKHSGTTTGTLLQILQVVRSEGWGGLYSGLR 81

Query: 75  PSLVGTAASQGIYYYFYQLFKNKAEAFVVAREARGRGDGSVGMFSWLIVAALAGSLNVLL 134
           PSL+GTAASQGIYYYFYQ+FKNKAE+    R+ARG GDG+VGMFSWL+VAA+AGSLNVLL
Sbjct: 82  PSLLGTAASQGIYYYFYQVFKNKAESIAAVRKARGLGDGTVGMFSWLVVAAIAGSLNVLL 141

Query: 135 TNPIWVLVTRMQTHTQAERKIMEGKREALVKEALE-SSTGSTLQDKLAELDLIKPRPYGT 193
           TNPIWVLVTRMQT TQAERKI+EGK++AL++EA E SS  STLQ+KLAELD IKP PYGT
Sbjct: 142 TNPIWVLVTRMQTQTQAERKIIEGKKQALLREASERSSIDSTLQEKLAELDSIKPHPYGT 201

Query: 194 FPAAREVYNETGVAGFWKGIIPTLIMVCNPSIQFMIYEGSLKHLRSKRAANKHGLKNVSA 253
             AAREVY+E G+ GFWKGIIPTLIMVCNPSIQFMIYE S KHLR+KR+ANK G KNV+A
Sbjct: 202 LQAAREVYSEAGITGFWKGIIPTLIMVCNPSIQFMIYESSSKHLRAKRSANKQGYKNVTA 261

Query: 254 LEVFLLGALAKLGATVSTYPLLVVKSRLQAKQEIGRNISLRYSGTLDAIIKMIHYEGLPG 313
           LEVFLLGALAKLGATVSTYPLLVVKSRLQAKQEIG N  LRYSGTLDAI+KMI YEGL G
Sbjct: 262 LEVFLLGALAKLGATVSTYPLLVVKSRLQAKQEIGGNNLLRYSGTLDAIVKMIRYEGLTG 321

Query: 314 FYKGMSTKIVQSVFAASILFMVKEELVKAYMALAVKSQKVL 354
           FYKGMSTKIVQSVFAAS+LFM+KEELVKAYM LA KS+K L
Sbjct: 322 FYKGMSTKIVQSVFAASVLFMIKEELVKAYMVLADKSKKHL 362




Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359491900|ref|XP_002278260.2| PREDICTED: mitochondrial substrate carrier family protein Q [Vitis vinifera] gi|297745646|emb|CBI40811.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|363807734|ref|NP_001242427.1| uncharacterized protein LOC100775304 [Glycine max] gi|255640195|gb|ACU20388.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|356532217|ref|XP_003534670.1| PREDICTED: LOW QUALITY PROTEIN: mitochondrial substrate carrier family protein Q-like [Glycine max] Back     alignment and taxonomy information
>gi|413950029|gb|AFW82678.1| hypothetical protein ZEAMMB73_608030 [Zea mays] Back     alignment and taxonomy information
>gi|357113317|ref|XP_003558450.1| PREDICTED: mitochondrial substrate carrier family protein Q-like [Brachypodium distachyon] Back     alignment and taxonomy information
>gi|215694587|dbj|BAG89778.1| unnamed protein product [Oryza sativa Japonica Group] gi|215740852|dbj|BAG97008.1| unnamed protein product [Oryza sativa Japonica Group] gi|218202432|gb|EEC84859.1| hypothetical protein OsI_31982 [Oryza sativa Indica Group] Back     alignment and taxonomy information
>gi|222641890|gb|EEE70022.1| hypothetical protein OsJ_29959 [Oryza sativa Japonica Group] Back     alignment and taxonomy information
>gi|115480061|ref|NP_001063624.1| Os09g0508900 [Oryza sativa Japonica Group] gi|113631857|dbj|BAF25538.1| Os09g0508900, partial [Oryza sativa Japonica Group] Back     alignment and taxonomy information
>gi|242086825|ref|XP_002439245.1| hypothetical protein SORBIDRAFT_09g003080 [Sorghum bicolor] gi|241944530|gb|EES17675.1| hypothetical protein SORBIDRAFT_09g003080 [Sorghum bicolor] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query356
TAIR|locus:2061176331 PXN "peroxisomal NAD carrier" 0.837 0.900 0.615 3e-94
DICTYBASE|DDB_G0272346329 mcfQ "mitochondrial substrate 0.418 0.452 0.430 8.6e-45
ASPGD|ASPL0000011755320 AN4280 [Emericella nidulans (t 0.410 0.456 0.356 4.4e-36
UNIPROTKB|Q2KJJ1307 SLC25A17 "Solute carrier famil 0.466 0.540 0.346 3e-33
TAIR|locus:2062002312 NDT1 "NAD+ transporter 1" [Ara 0.438 0.5 0.347 3e-33
TAIR|locus:2154910308 FOLT1 "folate transporter 1" [ 0.435 0.503 0.341 7.2e-33
UNIPROTKB|B4DU97270 SLC25A17 "cDNA FLJ57596, highl 0.457 0.603 0.346 5.5e-32
UNIPROTKB|O43808307 SLC25A17 "Peroxisomal membrane 0.457 0.530 0.346 5.5e-32
UNIPROTKB|F1SRB8308 SLC25A17 "Uncharacterized prot 0.457 0.529 0.335 1.4e-31
TAIR|locus:2031240363 NDT2 "NAD+ transporter 2" [Ara 0.421 0.413 0.329 4.2e-30
TAIR|locus:2061176 PXN "peroxisomal NAD carrier" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 938 (335.3 bits), Expect = 3.0e-94, P = 3.0e-94
 Identities = 197/320 (61%), Positives = 236/320 (73%)

Query:    22 TYPLQTVNTRQQTERIAKKGLPNCPAAASSSTLRQILEVIKTEGWGGLYSGLKPSLVGTA 81
             TYPLQTVNTRQQTER  K+            T+  + +V+K EGW  LY GL PSL GTA
Sbjct:    22 TYPLQTVNTRQQTERDLKR------EKRKLGTIEHMCQVVKQEGWERLYGGLAPSLAGTA 75

Query:    82 ASQGIYYYFYQLFKNKAEAFVVAREARGRGDGSVGMFSWLIVAALAGSLNVLLTNPIWVL 141
             ASQG+YYYFYQ+F+N+AEA  +AR+ +G GDGSVGMF+ L+VAA AGS+NVL+TNPIWV+
Sbjct:    76 ASQGVYYYFYQVFRNRAEATALARKKKGLGDGSVGMFASLLVAAFAGSVNVLMTNPIWVI 135

Query:   142 VTRMQTHTQAERKIMEGKREALVKEALESSTGSTLQDKLAELDLIKPRPYGTFPAAREVY 201
             VTRMQTH    RK+ + +  A        S  S  +  +A    ++PRPYGTF   REVY
Sbjct:   136 VTRMQTH----RKMTKDQTAA------PESPSSNAEALVA----VEPRPYGTFNTIREVY 181

Query:   202 NETGVAGFWKGIIPTLIMVCNPSIQFMIYEGSLKHLRSKRAANKHGLKNVSALEVFLLGA 261
             +E G+ GFWKG+IPTLIMV NPS+QFM+YE  L  L+ KRA    G  NV+ALE FLLGA
Sbjct:   182 DEAGITGFWKGVIPTLIMVSNPSMQFMLYETMLTKLKKKRALK--GSNNVTALETFLLGA 239

Query:   262 LAKLGATVSTYPLLVVKSRLQAKQEIGRNISLRYSGTLDAIIKMIHYEGLPGFYKGMSTK 321
             +AKLGATV+TYPLLVVKSRLQAKQ    +   +Y GTLDAI+KMI YEGL GFYKGMSTK
Sbjct:   240 VAKLGATVTTYPLLVVKSRLQAKQVTTGDKRQQYKGTLDAILKMIRYEGLYGFYKGMSTK 299

Query:   322 IVQSVFAASILFMVKEELVK 341
             IVQSV AA++LFM+KEELVK
Sbjct:   300 IVQSVLAAAVLFMIKEELVK 319




GO:0005739 "mitochondrion" evidence=ISM
GO:0005743 "mitochondrial inner membrane" evidence=ISS
GO:0006810 "transport" evidence=ISS
GO:0005778 "peroxisomal membrane" evidence=IDA
GO:0005774 "vacuolar membrane" evidence=IDA
GO:0005777 "peroxisome" evidence=IDA
GO:0043132 "NAD transport" evidence=IMP
GO:0044375 "regulation of peroxisome size" evidence=IMP
GO:0006635 "fatty acid beta-oxidation" evidence=RCA
DICTYBASE|DDB_G0272346 mcfQ "mitochondrial substrate carrier family protein" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
ASPGD|ASPL0000011755 AN4280 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
UNIPROTKB|Q2KJJ1 SLC25A17 "Solute carrier family 25 (Mitochondrial carrier; peroxisomal membrane protein, 34kDa), member 17" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
TAIR|locus:2062002 NDT1 "NAD+ transporter 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2154910 FOLT1 "folate transporter 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|B4DU97 SLC25A17 "cDNA FLJ57596, highly similar to Peroxisomal membrane protein PMP34" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|O43808 SLC25A17 "Peroxisomal membrane protein PMP34" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1SRB8 SLC25A17 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
TAIR|locus:2031240 NDT2 "NAD+ transporter 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
O04200PXN_ARATHNo assigned EC number0.62460.89600.9637yesno
Q76P23PM34_DICDINo assigned EC number0.34340.83420.9027yesno

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
estExt_fgenesh4_pg.C_LG_II0002
SubName- Full=Putative uncharacterized protein; (367 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query356
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 7e-18
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 1e-14
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 6e-10
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 0.002
PTZ00168259 PTZ00168, PTZ00168, mitochondrial carrier protein; 0.002
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
 Score = 77.3 bits (191), Expect = 7e-18
 Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 3/96 (3%)

Query: 249 KNVSALEVFLLGALAKLGATVSTYPLLVVKSRLQAKQEIGRNISLRYSGTLDAIIKMIHY 308
             +S L   L G +A   A   TYPL VVK+RLQ+    G     +Y G LD   K+   
Sbjct: 1   SPLSFLASLLAGGIAGAIAATVTYPLDVVKTRLQSSAAGGSR---KYKGILDCFKKIYKE 57

Query: 309 EGLPGFYKGMSTKIVQSVFAASILFMVKEELVKAYM 344
           EG+ G YKG+   +++   AA+I F   E L K  +
Sbjct: 58  EGIRGLYKGLLPNLLRVAPAAAIYFGTYETLKKLLL 93


Length = 96

>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>gnl|CDD|185494 PTZ00168, PTZ00168, mitochondrial carrier protein; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 356
KOG0764299 consensus Mitochondrial FAD carrier protein [Energ 100.0
KOG0752320 consensus Mitochondrial solute carrier protein [En 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0758297 consensus Mitochondrial carnitine-acylcarnitine ca 100.0
KOG0760302 consensus Mitochondrial carrier protein MRS3/4 [En 100.0
KOG0753317 consensus Mitochondrial fatty acid anion carrier p 100.0
KOG0757319 consensus Mitochondrial carrier protein - Rim2p/Mr 100.0
KOG0759286 consensus Mitochondrial oxoglutarate/malate carrie 100.0
KOG0761361 consensus Mitochondrial carrier protein CGI-69 [En 100.0
PTZ00168259 mitochondrial carrier protein; Provisional 100.0
KOG0754294 consensus Mitochondrial oxodicarboxylate carrier p 100.0
KOG0762311 consensus Mitochondrial carrier protein [Energy pr 100.0
KOG0751694 consensus Mitochondrial aspartate/glutamate carrie 100.0
KOG0768323 consensus Mitochondrial carrier protein PET8 [Ener 100.0
KOG0749298 consensus Mitochondrial ADP/ATP carrier proteins [ 100.0
KOG0769308 consensus Predicted mitochondrial carrier protein 100.0
KOG0765333 consensus Predicted mitochondrial carrier protein 100.0
KOG0036463 consensus Predicted mitochondrial carrier protein 100.0
KOG0766297 consensus Predicted mitochondrial carrier protein 100.0
KOG0755320 consensus Mitochondrial oxaloacetate carrier prote 100.0
KOG0770353 consensus Predicted mitochondrial carrier protein 100.0
KOG0763301 consensus Mitochondrial ornithine transporter [Ene 100.0
KOG0756299 consensus Mitochondrial tricarboxylate/dicarboxyla 100.0
KOG0750304 consensus Mitochondrial solute carrier protein [En 100.0
KOG0767333 consensus Mitochondrial phosphate carrier protein 100.0
KOG0752320 consensus Mitochondrial solute carrier protein [En 100.0
KOG0764299 consensus Mitochondrial FAD carrier protein [Energ 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 99.98
KOG0768323 consensus Mitochondrial carrier protein PET8 [Ener 99.97
KOG0760302 consensus Mitochondrial carrier protein MRS3/4 [En 99.97
KOG0762311 consensus Mitochondrial carrier protein [Energy pr 99.97
KOG0753317 consensus Mitochondrial fatty acid anion carrier p 99.97
KOG0757319 consensus Mitochondrial carrier protein - Rim2p/Mr 99.96
PTZ00168259 mitochondrial carrier protein; Provisional 99.96
KOG0758297 consensus Mitochondrial carnitine-acylcarnitine ca 99.96
KOG0754294 consensus Mitochondrial oxodicarboxylate carrier p 99.95
KOG0759286 consensus Mitochondrial oxoglutarate/malate carrie 99.95
KOG0751694 consensus Mitochondrial aspartate/glutamate carrie 99.94
KOG0761361 consensus Mitochondrial carrier protein CGI-69 [En 99.93
KOG0769 308 consensus Predicted mitochondrial carrier protein 99.93
KOG0770 353 consensus Predicted mitochondrial carrier protein 99.93
KOG0765333 consensus Predicted mitochondrial carrier protein 99.92
KOG0767 333 consensus Mitochondrial phosphate carrier protein 99.92
KOG0756299 consensus Mitochondrial tricarboxylate/dicarboxyla 99.91
KOG0766297 consensus Predicted mitochondrial carrier protein 99.91
KOG0763301 consensus Mitochondrial ornithine transporter [Ene 99.91
KOG0036463 consensus Predicted mitochondrial carrier protein 99.9
KOG0750304 consensus Mitochondrial solute carrier protein [En 99.9
KOG0749298 consensus Mitochondrial ADP/ATP carrier proteins [ 99.89
KOG0755320 consensus Mitochondrial oxaloacetate carrier prote 99.88
KOG2745321 consensus Mitochondrial carrier protein [General f 99.86
KOG1519297 consensus Predicted mitochondrial carrier protein 99.85
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.75
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.65
KOG2954427 consensus Mitochondrial carrier protein [General f 99.62
KOG2745321 consensus Mitochondrial carrier protein [General f 99.61
KOG1519297 consensus Predicted mitochondrial carrier protein 99.45
KOG2954427 consensus Mitochondrial carrier protein [General f 98.17
>KOG0764 consensus Mitochondrial FAD carrier protein [Energy production and conversion] Back     alignment and domain information
Probab=100.00  E-value=4e-56  Score=383.52  Aligned_cols=291  Identities=32%  Similarity=0.539  Sum_probs=256.2

Q ss_pred             HHHHHhhhHHHHHHHHHhchhHHHHHHHhhcccccCCCCCCCCCCCccHHHHHHHHHHhhchhhhccchhhhhhhhhhch
Q 018422            5 IANGLAGAGGGIIAQIITYPLQTVNTRQQTERIAKKGLPNCPAAASSSTLRQILEVIKTEGWGGLYSGLKPSLVGTAASQ   84 (356)
Q Consensus         5 ~~~~~ag~~a~~~~~~i~~Pld~ik~~~Q~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~~~~~~~~~   84 (356)
                      ..+.++|..||+++.+++||||++|+|.|++...     ......++++.+++++|++.||++|||||+.|++++..+++
T Consensus         6 ~~~~iaG~~aG~~stl~vhPlDl~K~R~qa~~g~-----~~~~~~y~g~~~~~~tI~r~eG~rGLY~Gl~P~v~G~~~sW   80 (299)
T KOG0764|consen    6 WEPLIAGLSAGFASTLVVHPLDLVKIRFQASDGR-----TSLRPAYKGIFGALKTIFRSEGLRGLYRGLSPNVLGSAPSW   80 (299)
T ss_pred             hhhhhhhhhhhhhhhhhccchhHhhhhhhhccCc-----cccchhhccHHHHHHHHHHhhhHHHHhccCcHHHHhchhhH
Confidence            4567999999999999999999999999998321     12344789999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCChHHHHHHHHHHhHhHhhhccchHHHHHHHHhcchhhhhhhhhhhhhhH
Q 018422           85 GIYYYFYQLFKNKAEAFVVAREARGRGDGSVGMFSWLIVAALAGSLNVLLTNPIWVLVTRMQTHTQAERKIMEGKREALV  164 (356)
Q Consensus        85 ~~~f~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~Ple~ik~r~q~~~~~~~~~~~~~~~~~~  164 (356)
                      ++||.+|+.+|.++.+..        .+..+++...+.+++.||++..++++|++++|+|++.+...             
T Consensus        81 giYF~~Y~~~K~~~~~~~--------~~~~l~~~~~l~sa~~AGa~t~~lTNPIWVvKTRL~~Q~~~-------------  139 (299)
T KOG0764|consen   81 GLYFFFYDFLKSFITEGF--------NSGLLSVLANLSSAAEAGAATTILTNPIWVVKTRLMLQSKN-------------  139 (299)
T ss_pred             HHHHHHHHHHHHHHhcCC--------CcccchHHHHHHHHHhhhHHHHHhcCCeEEEeehhhhhccc-------------
Confidence            999999999999985532        23446899999999999999999999999999999998643             


Q ss_pred             HhhhhcCCCCcchhhhhhhhcCCCCCCCcHHHHHHHHHhhcccccccccccchhccccchhHHHHHHHHHHHHhhhhhhc
Q 018422          165 KEALESSTGSTLQDKLAELDLIKPRPYGTFPAAREVYNETGVAGFWKGIIPTLIMVCNPSIQFMIYEGSLKHLRSKRAAN  244 (356)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~glyrG~~~~~~~~~~~~i~~~~y~~~~~~l~~~~~~~  244 (356)
                                          .....|+++++++++|+++||++|||+|+.|.++.+...+++|..||.++..+.+...  
T Consensus       140 --------------------~~~~~Y~~~f~a~rki~k~EG~rgLY~GlVP~L~GvshgAiQF~~YE~lK~~~~~~~~--  197 (299)
T KOG0764|consen  140 --------------------VQSTAYKGMFDALRKIYKEEGFRGLYKGLVPGLLGVSHGAIQFPAYEELKLRKNRKQG--  197 (299)
T ss_pred             --------------------ccccccccHHHHHHHHHHHHhHHHHHhhhhhHhhhhchhhhhhhhHHHHHHHHHHhcC--
Confidence                                3346899999999999999999999999999999999999999999999999875432  


Q ss_pred             ccCCCCcchHHHHHHHHHHHHhHhHhcchHHHHHHHHHhhhccCcccccCCCcHHHHHHHHHHhcCcchhccchhhhhhH
Q 018422          245 KHGLKNVSALEVFLLGALAKLGATVSTYPLLVVKSRLQAKQEIGRNISLRYSGTLDAIIKMIHYEGLPGFYKGMSTKIVQ  324 (356)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~ag~~a~~~t~Pld~ik~r~q~~~~~~~~~~~~y~~~~~~~~~i~~~eG~~~lyrG~~~~~~~  324 (356)
                      ...+...+..+.+..+.++-++|+.+|||++|+|+|||.+.     ..+.|.++++|++++|++||++|||||+.++++|
T Consensus       198 ~~~d~~l~n~~~i~~as~SKv~Ast~TYP~qVlRtRLQ~~~-----~~~~~~~~~~lIk~t~r~eG~~GfYkG~~~nLvR  272 (299)
T KOG0764|consen  198 RSTDNHLSNLDYIALASLSKVFASTLTYPHQVLRTRLQDQS-----DNPRYRGVFDLIKKTWRNEGFRGFYKGLATNLVR  272 (299)
T ss_pred             CCcccchhhHHHHHHHHHHHHHHHHhcchHHHHHHHHHhcc-----cCcccccHHHHHHHHHHHhchhhHHHHhHHHHhh
Confidence            11223345677777777999999999999999999999875     3678999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHh
Q 018422          325 SVFAASILFMVKEELVKAYMALAV  348 (356)
Q Consensus       325 ~~~~~~i~~~~ye~~~~~~~~~~~  348 (356)
                      .+|.+.|+|.+||.+++++.....
T Consensus       273 ~vPA~~ITF~vyEnv~~~L~~~~~  296 (299)
T KOG0764|consen  273 TVPAACITFLVYENVKHFLVTHRT  296 (299)
T ss_pred             ccccceeeeehHHHHHHHHhcccc
Confidence            999999999999999998865443



>KOG0752 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0758 consensus Mitochondrial carnitine-acylcarnitine carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0760 consensus Mitochondrial carrier protein MRS3/4 [Energy production and conversion] Back     alignment and domain information
>KOG0753 consensus Mitochondrial fatty acid anion carrier protein/Uncoupling protein [Energy production and conversion] Back     alignment and domain information
>KOG0757 consensus Mitochondrial carrier protein - Rim2p/Mrs12p [Energy production and conversion] Back     alignment and domain information
>KOG0759 consensus Mitochondrial oxoglutarate/malate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0761 consensus Mitochondrial carrier protein CGI-69 [Energy production and conversion] Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0754 consensus Mitochondrial oxodicarboxylate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0762 consensus Mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion] Back     alignment and domain information
>KOG0768 consensus Mitochondrial carrier protein PET8 [Energy production and conversion] Back     alignment and domain information
>KOG0749 consensus Mitochondrial ADP/ATP carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0769 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0765 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG0766 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0755 consensus Mitochondrial oxaloacetate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0770 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0763 consensus Mitochondrial ornithine transporter [Energy production and conversion] Back     alignment and domain information
>KOG0756 consensus Mitochondrial tricarboxylate/dicarboxylate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0750 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0767 consensus Mitochondrial phosphate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0752 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0764 consensus Mitochondrial FAD carrier protein [Energy production and conversion] Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0768 consensus Mitochondrial carrier protein PET8 [Energy production and conversion] Back     alignment and domain information
>KOG0760 consensus Mitochondrial carrier protein MRS3/4 [Energy production and conversion] Back     alignment and domain information
>KOG0762 consensus Mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0753 consensus Mitochondrial fatty acid anion carrier protein/Uncoupling protein [Energy production and conversion] Back     alignment and domain information
>KOG0757 consensus Mitochondrial carrier protein - Rim2p/Mrs12p [Energy production and conversion] Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0758 consensus Mitochondrial carnitine-acylcarnitine carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0754 consensus Mitochondrial oxodicarboxylate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0759 consensus Mitochondrial oxoglutarate/malate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion] Back     alignment and domain information
>KOG0761 consensus Mitochondrial carrier protein CGI-69 [Energy production and conversion] Back     alignment and domain information
>KOG0769 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0770 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0765 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0767 consensus Mitochondrial phosphate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0756 consensus Mitochondrial tricarboxylate/dicarboxylate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0766 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0763 consensus Mitochondrial ornithine transporter [Energy production and conversion] Back     alignment and domain information
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG0750 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0749 consensus Mitochondrial ADP/ATP carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0755 consensus Mitochondrial oxaloacetate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG2745 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG1519 consensus Predicted mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>KOG2954 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2745 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG1519 consensus Predicted mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2954 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query356
2lck_A303 Structure Of The Mitochondrial Uncoupling Protein 2 3e-06
>pdb|2LCK|A Chain A, Structure Of The Mitochondrial Uncoupling Protein 2 Determined By Nmr Molecular Fragment Replacement Length = 303 Back     alignment and structure

Iteration: 1

Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 74/329 (22%), Positives = 121/329 (36%), Gaps = 64/329 (19%) Query: 22 TYPLQTVNTRQQTERIAKKGLPNCPAAASSSTLRQILEVIKTEGWGGLYSGLKPSLVGTA 81 T+PL T R Q + ++ + +A L IL +++TEG LY+GL L Sbjct: 19 TFPLDTAKVRLQIQGESQGLVRTAASAQYRGVLGTILTMVRTEGPRSLYNGLVAGLQRQM 78 Query: 82 ASQGIYYYFYQLFKNKAEAFVVAREARGRGDGSVGMFSWLIVAALAGSLNVLLTNPIWVL 141 + + Y K + +G G+ S L+ + G+L V + P V+ Sbjct: 79 SFASVRIGLYDSVK----------QFYTKGSEHAGIGSRLLAGSTTGALAVAVAQPTDVV 128 Query: 142 VTRMQTHTQAERKIMEGKREALVKEALESSTGSTLQDKLAELDLIKPRPYGTFPAAREVY 201 R Q +A G R R T A + + Sbjct: 129 KVRFQAQARA-----GGGR----------------------------RYQSTVEAYKTIA 155 Query: 202 NETGVAGFWKGIIPTL----IMVCNPSIQFMIYEGSLKHLRSKRAANKHGLKNVSALEVF 257 E G+ G WKG P + I+ C + + + + +L L++ + SA Sbjct: 156 REEGIRGLWKGTSPNVARNAIVNCAELVTYDLIKDTL--LKANLMTDDLPCHFTSAFG-- 211 Query: 258 LLGALAKLGATVSTYPLLVVKSRLQAKQEIGRNISL-RYSGTLDAIIKMIHYEGLPGFYK 316 A TV P+ VVK+R N +L +Y + M+ EG FYK Sbjct: 212 -----AGFCTTVIASPVDVVKTRYM-------NSALGQYHSAGHCALTMLRKEGPRAFYK 259 Query: 317 GMSTKIVQSVFAASILFMVKEELVKAYMA 345 G ++ ++F+ E+L +A MA Sbjct: 260 GFMPSFLRLGSWNVVMFVTYEQLKRALMA 288

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query356
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 6e-41
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 6e-16
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 6e-37
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 7e-20
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 2e-10
1okc_A 297 ADP, ATP carrier protein heart isoform T1; mitocho 2e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-10
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
 Score =  144 bits (366), Expect = 6e-41
 Identities = 76/340 (22%), Positives = 118/340 (34%), Gaps = 60/340 (17%)

Query: 9   LAGAGGGIIAQIITYPLQTVNTRQQTERIAKKGLPNCPAAASSSTLRQILEVIKTEGWGG 68
           L       IA +IT+PL T   R Q +  ++  +    +A     L  IL +++TEG   
Sbjct: 6   LGAGTAACIADLITFPLDTAKVRLQIQGESQGLVRTAASAQYRGVLGTILTMVRTEGPRS 65

Query: 69  LYSGLKPSLVGTAASQGIYYYFYQLFKNKAEAFVVAREARGRGDGSVGMFSWLIVAALAG 128
           LY+GL   L    +   +    Y   K              +G    G+ S L+  +  G
Sbjct: 66  LYNGLVAGLQRQMSFASVRIGLYDSVKQFY----------TKGSEHAGIGSRLLAGSTTG 115

Query: 129 SLNVLLTNPIWVLVTRMQTHTQAERKIMEGKREALVKEALESSTGSTLQDKLAELDLIKP 188
           +L V +  P  V+  R Q                                  A+      
Sbjct: 116 ALAVAVAQPTDVVKVRFQ----------------------------------AQARAGGG 141

Query: 189 RPY-GTFPAAREVYNETGVAGFWKGIIPTLI--MVCNPSIQFMIYEGSLKHLRSKRAANK 245
           R Y  T  A + +  E G+ G WKG  P +    + N   + + Y+        K    K
Sbjct: 142 RRYQSTVEAYKTIAREEGIRGLWKGTSPNVARNAIVN-CAELVTYD------LIKDTLLK 194

Query: 246 HGLKNVSALEVFLLGALAKLGATVSTYPLLVVKSRLQAKQEIGRNISLRYSGTLDAIIKM 305
             L        F     A    TV   P+ VVK+R      +G+     Y       + M
Sbjct: 195 ANLMTDDLPCHFTSAFGAGFCTTVIASPVDVVKTRYM-NSALGQ-----YHSAGHCALTM 248

Query: 306 IHYEGLPGFYKGMSTKIVQSVFAASILFMVKEELVKAYMA 345
           +  EG   FYKG     ++      ++F+  E+L +A MA
Sbjct: 249 LRKEGPRAFYKGFMPSFLRLGSWNVVMFVTYEQLKRALMA 288


>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query356
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 100.0
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 100.0
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure
Probab=100.00  E-value=3e-54  Score=398.97  Aligned_cols=287  Identities=25%  Similarity=0.304  Sum_probs=248.8

Q ss_pred             HHHHhhhHHHHHHHHHhchhHHHHHHHhhcccccCCCCCCCCCCCccHHHHHHHHHHhhchhhhccchhhhhhhhhhchh
Q 018422            6 ANGLAGAGGGIIAQIITYPLQTVNTRQQTERIAKKGLPNCPAAASSSTLRQILEVIKTEGWGGLYSGLKPSLVGTAASQG   85 (356)
Q Consensus         6 ~~~~ag~~a~~~~~~i~~Pld~ik~~~Q~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~~~~~~~~~~   85 (356)
                      .++++|++|++++.+++||||+||+|+|++..............+.++++++++|+++||++|||||+.+++++.++..+
T Consensus         3 ~~~~aG~~ag~~~~~~~~Pld~iKtrlQ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~~~   82 (303)
T 2lck_A            3 VKFLGAGTAACIADLITFPLDTAKVRLQIQGESQGLVRTAASAQYRGVLGTILTMVRTEGPRSLYNGLVAGLQRQMSFAS   82 (303)
T ss_dssp             CHHHHHHHHHHHHHHTTHHHHHHHHHSSCCTTCCSHHHHCSCSSCSCHHHHHHHHHHHHCHHHHHSSHHHHHHHHHHHHH
T ss_pred             hhHHhHHHHHHHHHHHcCcHHHHHHHHHhhhccccccccccCCCCCCHHHHHHHHHHhhCHHHHHcCCHHHHHHHHHHHH
Confidence            47899999999999999999999999999764211000001236789999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCCCCCCCChHHHHHHHHHHhHhHhhhccchHHHHHHHHhcchhhhhhhhhhhhhhHH
Q 018422           86 IYYYFYQLFKNKAEAFVVAREARGRGDGSVGMFSWLIVAALAGSLNVLLTNPIWVLVTRMQTHTQAERKIMEGKREALVK  165 (356)
Q Consensus        86 ~~f~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~Ple~ik~r~q~~~~~~~~~~~~~~~~~~~  165 (356)
                      ++|.+||.+++.+.+.          ....+....+++|++||+++.++++|+|+||+|||++...              
T Consensus        83 i~f~~ye~~k~~~~~~----------~~~~~~~~~~~ag~~ag~~~~~~~~Pld~vktrlq~~~~~--------------  138 (303)
T 2lck_A           83 VRIGLYDSVKQFYTKG----------SEHAGIGSRLLAGSTTGALAVAVAQPTDVVKVRFQAQARA--------------  138 (303)
T ss_dssp             HTTTHHHHHHHHHSCC----------CSSCCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHSCSC--------------
T ss_pred             HHHHHHHHHHHHHhcC----------CcCCcHHHHHHHHHHHHHHHHHHcCcHHHHHHHHhccccc--------------
Confidence            9999999999876532          0135778899999999999999999999999999997421              


Q ss_pred             hhhhcCCCCcchhhhhhhhcCCCCCCCcHHHHHHHHHhhcccccccccccchhc-cccchhHHHHHHHHHHHHhhhhhhc
Q 018422          166 EALESSTGSTLQDKLAELDLIKPRPYGTFPAAREVYNETGVAGFWKGIIPTLIM-VCNPSIQFMIYEGSLKHLRSKRAAN  244 (356)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~glyrG~~~~~~~-~~~~~i~~~~y~~~~~~l~~~~~~~  244 (356)
                                         ....+|.+.++++++|+++||++|||||+.+++++ +++.+++|.+||.+++.+.+..   
T Consensus       139 -------------------~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~~~i~f~~ye~~k~~l~~~~---  196 (303)
T 2lck_A          139 -------------------GGGRRYQSTVEAYKTIAREEGIRGLWKGTSPNVARNAIVNCAELVTYDLIKDTLLKAN---  196 (303)
T ss_dssp             -------------------CCSSSCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTT---
T ss_pred             -------------------CCCCCCCCHHHHHHHHHHhcChhhhhCCccHHHHHHHHHHHHHHHHHHHHHHHHHhcc---
Confidence                               12346889999999999999999999999999999 8899999999999999876532   


Q ss_pred             ccCCCCcchHHHHHHHHHHHHhHhHhcchHHHHHHHHHhhhccCcccccCCCcHHHHHHHHHHhcCcchhccchhhhhhH
Q 018422          245 KHGLKNVSALEVFLLGALAKLGATVSTYPLLVVKSRLQAKQEIGRNISLRYSGTLDAIIKMIHYEGLPGFYKGMSTKIVQ  324 (356)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~ag~~a~~~t~Pld~ik~r~q~~~~~~~~~~~~y~~~~~~~~~i~~~eG~~~lyrG~~~~~~~  324 (356)
                         ....+....+++|++||++++++++|+|+||+|||.+.      ...|.++++|+++|+++||++|||||+.++++|
T Consensus       197 ---~~~~~~~~~~~~g~~ag~~~~~~~~P~dvvktrlq~~~------~~~y~~~~~~~~~i~~~eG~~glyrG~~~~~~r  267 (303)
T 2lck_A          197 ---LMTDDLPCHFTSAFGAGFCTTVIASPVDVVKTRYMNSA------LGQYHSAGHCALTMLRKEGPRAFYKGFMPSFLR  267 (303)
T ss_dssp             ---SCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC------SSSCCSHHHHHHHHHHSSCTHHHHSCCHHHHHH
T ss_pred             ---CCCCchHHHHHHHHHHHHHHHHHcCHHHHHHHHHHhcc------ccccCCHHHHHHHHHHHcChHHhhccHHHHHHH
Confidence               22456778899999999999999999999999999964      235999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHH
Q 018422          325 SVFAASILFMVKEELVKAYMALA  347 (356)
Q Consensus       325 ~~~~~~i~~~~ye~~~~~~~~~~  347 (356)
                      .+|.++++|.+||.+++++.+..
T Consensus       268 ~~p~~~i~f~~ye~~k~~l~~~~  290 (303)
T 2lck_A          268 LGSWNVVMFVTYEQLKRALMAAY  290 (303)
T ss_dssp             HHHHHHHHHHHHHHHHSCCCCHH
T ss_pred             HHhHHHHHHHHHHHHHHHHHHhc
Confidence            99999999999999998876544



>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 356
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 1e-20
d1okca_ 292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 2e-07
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 2e-04
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
 Score = 88.6 bits (218), Expect = 1e-20
 Identities = 46/337 (13%), Positives = 111/337 (32%), Gaps = 49/337 (14%)

Query: 3   SAIANGLAGAGGGIIAQIITYPLQTVNTRQQTERIAKKGLPNCPAAASSSTLRQILEVIK 62
           S + + LAG     I++    P++ V    Q +  +K+             +  ++ + K
Sbjct: 5   SFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQI---SAEKQYKGIIDCVVRIPK 61

Query: 63  TEGWGGLYSGLKPSLVGTAASQGIYYYFYQLFKNKAEAFVVAREARGRGDGSVGMFSWLI 122
            +G+   + G   +++    +Q + + F   +K                         L 
Sbjct: 62  EQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQI-----FLGGVDRHKQFWRYFAGNLA 116

Query: 123 VAALAGSLNVLLTNPIWVLVTRMQTHTQAERKIMEGKREALVKEALESSTGSTLQDKLAE 182
               AG+ ++    P+    TR+                                     
Sbjct: 117 SGGAAGATSLCFVYPLDFARTRLAADVGKGAAQ--------------------------- 149

Query: 183 LDLIKPRPYGTFPAAREVYNETGVAGFWKGIIPTLIMVCNPSIQFMIYEGSLKHLRSKRA 242
                    G      +++   G+ G ++G   ++  +      +     + K +     
Sbjct: 150 -----REFTGLGNCITKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGML---- 200

Query: 243 ANKHGLKNVSALEVFLLGALAKLGATVSTYPLLVVKSRLQAKQEIGRNISLRYSGTLDAI 302
                 KNV  +  +++       A + +YP   V+ R+   Q   +   + Y+GT+D  
Sbjct: 201 ---PDPKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMM-QSGRKGADIMYTGTVDCW 256

Query: 303 IKMIHYEGLPGFYKGMSTKIVQSVFAASILFMVKEEL 339
            K+   EG   F+KG  + +++ +   + + ++ +E+
Sbjct: 257 RKIAKDEGPKAFFKGAWSNVLRGM-GGAFVLVLYDEI 292


>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query356
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 100.0
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 99.96
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
Probab=100.00  E-value=2.5e-50  Score=368.33  Aligned_cols=287  Identities=16%  Similarity=0.264  Sum_probs=245.1

Q ss_pred             hhHHHHHhhhHHHHHHHHHhchhHHHHHHHhhcccccCCCCCCCCCCCccHHHHHHHHHHhhchhhhccchhhhhhhhhh
Q 018422            3 SAIANGLAGAGGGIIAQIITYPLQTVNTRQQTERIAKKGLPNCPAAASSSTLRQILEVIKTEGWGGLYSGLKPSLVGTAA   82 (356)
Q Consensus         3 ~~~~~~~ag~~a~~~~~~i~~Pld~ik~~~Q~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~~~~~~~   82 (356)
                      +.+.++++|++|++++.+++||||+||+|+|++.....   ......++|+++++++++++||+++||+|+.+.+++..+
T Consensus         5 ~~~~~~laG~~a~~i~~~~~~Pld~iK~r~Q~~~~~~~---~~~~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~l~~~~~   81 (292)
T d1okca_           5 SFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQ---ISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFP   81 (292)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHGGGCSS---CCGGGSCCSHHHHHHHHHHHHCGGGGGTTTHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCCCCCC---CCcccccCCHHHHHHHHHHhhhhhhhhhccchhhhhhhc
Confidence            35689999999999999999999999999999875431   223346789999999999999999999999999999999


Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCChHHHHHHHHHHhHhHhhhccchHHHHHHHHhcchhhhhhhhhhhhh
Q 018422           83 SQGIYYYFYQLFKNKAEAFVVAREARGRGDGSVGMFSWLIVAALAGSLNVLLTNPIWVLVTRMQTHTQAERKIMEGKREA  162 (356)
Q Consensus        83 ~~~~~f~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~Ple~ik~r~q~~~~~~~~~~~~~~~~  162 (356)
                      ..+++|.+|+.+++.+.......     .+........+++|.+|++++.++++|+|++|+|||.+....          
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~a~~~~~~~~~P~~~ik~r~~~~~~~~----------  146 (292)
T d1okca_          82 TQALNFAFKDKYKQIFLGGVDRH-----KQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKG----------  146 (292)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCTT-----TCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSS----------
T ss_pred             ccchhHHHHHHHHHHHhcccccc-----cccchhhhhhhhhhhhhhhhHHhhhhhhhhhheeeecccccc----------
Confidence            99999999999998887642111     111223456788999999999999999999999999985422          


Q ss_pred             hHHhhhhcCCCCcchhhhhhhhcCCCCCCCcHHHHHHHHHhhcccccccccccchhc-cccchhHHHHHHHHHHHHhhhh
Q 018422          163 LVKEALESSTGSTLQDKLAELDLIKPRPYGTFPAAREVYNETGVAGFWKGIIPTLIM-VCNPSIQFMIYEGSLKHLRSKR  241 (356)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~glyrG~~~~~~~-~~~~~i~~~~y~~~~~~l~~~~  241 (356)
                                            ...+.+.+.++.++++++++|+++||+|+.+++++ +++.+++|..||.+++.+.+..
T Consensus       147 ----------------------~~~~~~~~~~~~~~~~~~~~G~~~l~~G~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~  204 (292)
T d1okca_         147 ----------------------AAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDPK  204 (292)
T ss_dssp             ----------------------TTTCSCSSHHHHHHHHHHHHCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHSSCGGG
T ss_pred             ----------------------ccccccccHHHHHHHhhhccchhhhhccccccccceehHhhhhhhhccchhhhccccc
Confidence                                  23456789999999999999999999999999999 8899999999999998765532


Q ss_pred             hhcccCCCCcchHHHHHHHHHHHHhHhHhcchHHHHHHHHHhhhccCcccccCCCcHHHHHHHHHHhcCcchhccchhhh
Q 018422          242 AANKHGLKNVSALEVFLLGALAKLGATVSTYPLLVVKSRLQAKQEIGRNISLRYSGTLDAIIKMIHYEGLPGFYKGMSTK  321 (356)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~ag~~a~~~t~Pld~ik~r~q~~~~~~~~~~~~y~~~~~~~~~i~~~eG~~~lyrG~~~~  321 (356)
                              .......++++.++++++++++|||||||+|||.+.. .......|.++++|+++++++||++|||||+.++
T Consensus       205 --------~~~~~~~~~~~~~~~~~a~~~t~P~dvvktR~q~~~~-~~~~~~~y~~~~~~~~~i~~~eG~~~lyrG~~~~  275 (292)
T d1okca_         205 --------NVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQSG-RKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSN  275 (292)
T ss_dssp             --------CSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTT-CCGGGCSCSSHHHHHHHHHHHHCGGGGGTTHHHH
T ss_pred             --------ccchHHHHHHHHHHHHHHhhccccHHHHHHHHHhcCC-CCCCCCCCCCHHHHHHHHHHhcCcCcccccHHHH
Confidence                    4567888999999999999999999999999999763 2234457999999999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHH
Q 018422          322 IVQSVFAASILFMVKEEL  339 (356)
Q Consensus       322 ~~~~~~~~~i~~~~ye~~  339 (356)
                      ++|.++ .+++|++||.+
T Consensus       276 ~~r~i~-~~i~~~~ye~l  292 (292)
T d1okca_         276 VLRGMG-GAFVLVLYDEI  292 (292)
T ss_dssp             HHHHHH-HHHHHHHHHTC
T ss_pred             HHHHHH-HHhhhhHhhcC
Confidence            999766 68889999963



>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure