Citrus Sinensis ID: 018529

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350----
Protein Sequence
MSSTAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISMED
Secondary Structure (PSIPRED)
cccccccEEEEEEEEEEccccccEEEEEEEccccccEEEEEEEEEEcccccccccccccccccccccccccccEEEEEEcccccccccccEEEEccccccccccccccccccEEEEEEEcccccccEEEEEccEEEEEcccccccEEEEEccccccccccEEEEcccccccEEEEEcccHHHHHHHHHHHHHcccEEEEEEccccHHHHHHHccccEEEccccccccHHHHHHHHccccccEEEEccccHHHHHHHHHHHHcccEEEEEEEccccccEEEcccccEEcccEEEcccccccccccccHHHHHHHHcccccccccEEccccHHHHHHHHHHHHccccEEEEEEEcc
Secondary Structure Prediction (SSPRO)
ccccccccEEEEEEEEcccccccEEEEEEEccccccEEEEEEEEEEEcHHHHHHHHcccccccccEccccEEEEEEEEEcccccccccccEEEHHHcccccccccccEEEccEEEEccccccccEcEEEEEHHHEEEccccccHHHHHHHHcHHHHHHHHHHcccccccccEEEEEcccHHHHHHHHHHHHccccEEEEEcccHHHHHHHHHHcccEEEcHHHccccHHHHHHHHccccEcEEEEccccHHHHHHHHHcEcccccEEEEcccccccccEEEccHHHHcccEEEEccHHHccHHHHHHHHHHHHHccccccHHHEEEEEEHHHcHHHHHHHHHccccEEEEEccc
Coil and Loop (DISEMBL)
MSSTAGLILTCKAAVAweagkpliiqdvevappqaMEVRIKIKYtslcrtdlyfweskgqtplfprifgheaagvvesvgegvsdlevgdhvlpvftgecgdcrhcrfsingepvnhflgtstFSEYTVVHsgcvakinplapldkvcilscgvstglgatlnvakpergssvavFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKfgvtdfvntsehdrPIQEVIAEMTnggvdrsvectgnIDNMISAFECVHDGWGVAVLVgvpskdavfmtkpinvlnertlkgtffgnykprtdlpsVVDMYMNKQLELEKFithripfseINKAFEYMVKGEGLRCIISMED
Flexible Loop (DISEMBL)
MSSTAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAegariagasriigvdrsskrFEEAkkfgvtdfvntsehdrpIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMtkpinvlnertlkgtffgnykprtdlPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISMED
Low Complexity Region (SEG)
MSSTAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHeaagvvesvgegvsdlevgdHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERgssvavfglgavglaaaegariagasriigVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISMED
Disordered region (IsUnstruct)
*****GLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS**RFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCII****
Disordered Region (DISOPRED)
*****GL*LTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISME*
Disordered Region (DISEMBL)
MSSTAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISMED
Disordered Region (DISPRO)
*****GLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISMED
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSSTAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISMED
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	354	2.2.26 [Sep-21-2011]
P14674	380	Alcohol dehydrogenase 2 O	N/A	no	1.0	0.931	0.744	1e-170
P14675	380	Alcohol dehydrogenase 3 O	N/A	no	1.0	0.931	0.744	1e-170
P14673	380	Alcohol dehydrogenase 1 O	N/A	no	1.0	0.931	0.744	1e-170
P48977	380	Alcohol dehydrogenase OS=	N/A	no	1.0	0.931	0.744	1e-169
P28032	380	Alcohol dehydrogenase 2 O	N/A	no	1.0	0.931	0.739	1e-169
P17648	380	Alcohol dehydrogenase OS=	N/A	no	1.0	0.931	0.726	1e-167
P06525	379	Alcohol dehydrogenase cla	yes	no	0.988	0.923	0.744	1e-167
Q2R8Z5	379	Alcohol dehydrogenase 1 O	yes	no	0.994	0.928	0.727	1e-166
Q75ZX4	379	Alcohol dehydrogenase 1 O	N/A	no	0.994	0.928	0.727	1e-166
P25141	382	Alcohol dehydrogenase 1 O	N/A	no	0.994	0.921	0.728	1e-166

>sp|P14674|ADH2_SOLTU Alcohol dehydrogenase 2 OS=Solanum tuberosum GN=ADH2 PE=2 SV=1

 Score =  598 bits (1541), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 283/380 (74%), Positives = 326/380 (85%), Gaps = 26/380 (6%)

Query: 1   MSSTAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ 60
           MS+T G ++ CKAAVAWEAGKPL++++V+VAPPQ MEVR+KI YTSLC TD+YFWE+KGQ
Sbjct: 1   MSTTTGQVIRCKAAVAWEAGKPLVMEEVDVAPPQKMEVRLKILYTSLCHTDVYFWEAKGQ 60

Query: 61  TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHC-------------- 106
            P+FPRI GHEAAG+VESVGEGV++L  GDHVLPVFTGEC DC HC              
Sbjct: 61  NPVFPRILGHEAAGIVESVGEGVTELAPGDHVLPVFTGECKDCAHCKSEESNMCSLLRIN 120

Query: 107 ------------RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGV 154
                       RFSING+P+ HF+GTSTFSEYTVVH GCVAKINPLAPLDKVC+LSCG+
Sbjct: 121 TDRGVMINDGQSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPLAPLDKVCVLSCGI 180

Query: 155 STGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG 214
           STGLGATLNVAKP +GSSVA+FGLGAVGLAAAEGARIAGASRIIGVD ++ RFE+AKKFG
Sbjct: 181 STGLGATLNVAKPTKGSSVAIFGLGAVGLAAAEGARIAGASRIIGVDLNASRFEQAKKFG 240

Query: 215 VTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 274
           VT+FVN  ++ +P+QEVIAEMT+GGVDRSVECTG+ID MISAFECVHDGWGVAVLVGVP 
Sbjct: 241 VTEFVNPKDYSKPVQEVIAEMTDGGVDRSVECTGHIDAMISAFECVHDGWGVAVLVGVPH 300

Query: 275 KDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEIN 334
           K+AVF T P+N LNERTLKGTFFGNYKPR+D+PSVV+ YMNK+LELEKFITH +PF+EIN
Sbjct: 301 KEAVFKTHPMNFLNERTLKGTFFGNYKPRSDIPSVVEKYMNKELELEKFITHTLPFAEIN 360

Query: 335 KAFEYMVKGEGLRCIISMED 354
           KAF+ M+KGEGLRCII+MED
Sbjct: 361 KAFDLMLKGEGLRCIITMED 380

Solanum tuberosum (taxid: 4113)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 1

>sp|P14675|ADH3_SOLTU Alcohol dehydrogenase 3 OS=Solanum tuberosum GN=ADH3 PE=2 SV=1

 Score =  598 bits (1541), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 283/380 (74%), Positives = 326/380 (85%), Gaps = 26/380 (6%)

Query: 1   MSSTAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ 60
           MS+T G ++ CKAAVAWEAGKPL++++V+VAPPQ MEVR+KI YTSLC TD+YFWE+KGQ
Sbjct: 1   MSTTVGQVIRCKAAVAWEAGKPLVMEEVDVAPPQKMEVRLKILYTSLCHTDVYFWEAKGQ 60

Query: 61  TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHC-------------- 106
            P+FPRI GHEAAG+VESVGEGV++L  GDHVLPVFTGEC DC HC              
Sbjct: 61  NPVFPRILGHEAAGIVESVGEGVTELAPGDHVLPVFTGECKDCAHCKSEESNMCSLLRIN 120

Query: 107 ------------RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGV 154
                       RFSING+P+ HF+GTSTFSEYTVVH GCVAKINPLAPLDKVC+LSCG+
Sbjct: 121 TDRGVMINDGQSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPLAPLDKVCVLSCGI 180

Query: 155 STGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG 214
           STGLGATLNVAKP +GSSVA+FGLGAVGLAAAEGARIAGASRIIGVD ++ RFE+AKKFG
Sbjct: 181 STGLGATLNVAKPTKGSSVAIFGLGAVGLAAAEGARIAGASRIIGVDLNASRFEQAKKFG 240

Query: 215 VTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 274
           VT+FVN  ++ +P+QEVIAEMT+GGVDRSVECTG+ID MISAFECVHDGWGVAVLVGVP 
Sbjct: 241 VTEFVNPKDYSKPVQEVIAEMTDGGVDRSVECTGHIDAMISAFECVHDGWGVAVLVGVPH 300

Query: 275 KDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEIN 334
           K+AVF T P+N LNERTLKGTFFGNYKPR+D+PSVV+ YMNK+LELEKFITH +PF+EIN
Sbjct: 301 KEAVFKTHPMNFLNERTLKGTFFGNYKPRSDIPSVVEKYMNKELELEKFITHTLPFAEIN 360

Query: 335 KAFEYMVKGEGLRCIISMED 354
           KAF+ M+KGEGLRCII+MED
Sbjct: 361 KAFDLMLKGEGLRCIITMED 380

Solanum tuberosum (taxid: 4113)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

>sp|P14673|ADH1_SOLTU Alcohol dehydrogenase 1 OS=Solanum tuberosum GN=ADH1 PE=2 SV=1

 Score =  597 bits (1540), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 283/380 (74%), Positives = 327/380 (86%), Gaps = 26/380 (6%)

Query: 1   MSSTAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ 60
           MS+T G ++ CKAAVAWEAGKPL++++V+VAPPQ MEVR+KI YTSLC TD+YFWE+KGQ
Sbjct: 1   MSTTVGQVIRCKAAVAWEAGKPLVMEEVDVAPPQKMEVRLKILYTSLCHTDVYFWEAKGQ 60

Query: 61  TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHC-------------- 106
            P+FPRI GHEAAG+VESVGEGV++L  GDHVLPVFTGEC DC HC              
Sbjct: 61  NPVFPRILGHEAAGIVESVGEGVTELGPGDHVLPVFTGECKDCAHCKSEESNMCSLLRIN 120

Query: 107 ------------RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGV 154
                       RFSING+P+ HF+GTSTFSEYTVVH GCVAKINPLAPLDKVC+LSCG+
Sbjct: 121 TDRGVMINDGQSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPLAPLDKVCVLSCGI 180

Query: 155 STGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG 214
           STGLGATLNVAKP +GSSVA+FGLGAVGLAAAEGARIAGASRIIGVD ++ RFE+AKKFG
Sbjct: 181 STGLGATLNVAKPTKGSSVAIFGLGAVGLAAAEGARIAGASRIIGVDLNASRFEQAKKFG 240

Query: 215 VTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 274
           VT+FVN  ++ +P+QEVIAEMT+GGVDRSVECTG+ID MISAFECVHDGWGVAVLVGVP 
Sbjct: 241 VTEFVNPKDYSKPVQEVIAEMTDGGVDRSVECTGHIDAMISAFECVHDGWGVAVLVGVPH 300

Query: 275 KDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEIN 334
           K+AVF T P+N+LNERTLKGTFFGNYKPR+D+PSVV+ YMNK+LELEKFITH +PF+EIN
Sbjct: 301 KEAVFKTHPMNLLNERTLKGTFFGNYKPRSDIPSVVEKYMNKELELEKFITHTLPFAEIN 360

Query: 335 KAFEYMVKGEGLRCIISMED 354
           KAF+ M+KGEGLRCII+MED
Sbjct: 361 KAFDLMLKGEGLRCIITMED 380

Solanum tuberosum (taxid: 4113)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

>sp|P48977|ADH_MALDO Alcohol dehydrogenase OS=Malus domestica GN=ADH PE=2 SV=1

 Score =  596 bits (1536), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 283/380 (74%), Positives = 324/380 (85%), Gaps = 26/380 (6%)

Query: 1   MSSTAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ 60
           MS+TAG ++ C+AAVAWEAGKPL+I++VEVAPPQA EVRIKI +TSLC TD+YFWE+KGQ
Sbjct: 1   MSNTAGQVIRCRAAVAWEAGKPLVIEEVEVAPPQANEVRIKILFTSLCHTDVYFWEAKGQ 60

Query: 61  TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHC-------------- 106
            PLFPRI+GHEA G+VESVGEGV+DL+ GDHVLPVFTGEC DC HC              
Sbjct: 61  NPLFPRIYGHEAGGIVESVGEGVTDLKAGDHVLPVFTGECKDCAHCKSEESNMCDLLRIN 120

Query: 107 ------------RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGV 154
                       RFSI G+P+ HF+GTSTFSEYTVVH GC+AKINP APLDKVC+LSCG+
Sbjct: 121 TDRGVMLSDGKSRFSIKGKPIYHFVGTSTFSEYTVVHVGCLAKINPSAPLDKVCLLSCGI 180

Query: 155 STGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG 214
           STGLGATLNVAKP++GS+VAVFGLGAVGLAAAEGAR++GASRIIGVD  S RFEEAKKFG
Sbjct: 181 STGLGATLNVAKPKKGSTVAVFGLGAVGLAAAEGARLSGASRIIGVDLHSDRFEEAKKFG 240

Query: 215 VTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 274
           VT+FVN   H++P+QEVIAE+TN GVDRS+ECTG+ + MISAFECVHDGWGVAVLVGVP 
Sbjct: 241 VTEFVNPKAHEKPVQEVIAELTNRGVDRSIECTGSTEAMISAFECVHDGWGVAVLVGVPH 300

Query: 275 KDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEIN 334
           KDAVF T P+N LNERTLKGTFFGNYK RTD+PSVV+ YMNK+LELEKFITH++PFSEIN
Sbjct: 301 KDAVFKTHPVNFLNERTLKGTFFGNYKTRTDIPSVVEKYMNKELELEKFITHKVPFSEIN 360

Query: 335 KAFEYMVKGEGLRCIISMED 354
           KAFEYM+KGEGLRCII ME+
Sbjct: 361 KAFEYMLKGEGLRCIIRMEE 380

Malus domestica (taxid: 3750)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

>sp|P28032|ADH2_SOLLC Alcohol dehydrogenase 2 OS=Solanum lycopersicum GN=ADH2 PE=2 SV=2

 Score =  593 bits (1529), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 281/380 (73%), Positives = 323/380 (85%), Gaps = 26/380 (6%)

Query: 1   MSSTAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ 60
           MS+T G ++ CKAAVAWEAGKPL++++V+VAPPQ MEVR+KI YTSLC TD+YFWE+KGQ
Sbjct: 1   MSTTVGQVIRCKAAVAWEAGKPLVMEEVDVAPPQKMEVRLKILYTSLCHTDVYFWEAKGQ 60

Query: 61  TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHC-------------- 106
            P+FPRI GHEAAG+VESVGEGV+DL  GDHVLPVFTGEC DC HC              
Sbjct: 61  NPVFPRILGHEAAGIVESVGEGVTDLAPGDHVLPVFTGECKDCAHCKSEESNMCSLLRIN 120

Query: 107 ------------RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGV 154
                       RFSING P+ HF+GTSTFSEYTVVH GCVAKINPLAPLDKVC+LSCG+
Sbjct: 121 TDRGVMLNDGKSRFSINGNPIYHFVGTSTFSEYTVVHVGCVAKINPLAPLDKVCVLSCGI 180

Query: 155 STGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG 214
           STGLGA+LNVAKP +GSSVA+FGLGAVGLAAAEGARIAGASRIIGVD ++ RFE+AKKFG
Sbjct: 181 STGLGASLNVAKPTKGSSVAIFGLGAVGLAAAEGARIAGASRIIGVDLNASRFEQAKKFG 240

Query: 215 VTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 274
           VT+FVN  ++ +P+QEVIAEMT+GGVDRSVECTG+ID MISAFECVHDGWGVAVLVGVP 
Sbjct: 241 VTEFVNPKDYSKPVQEVIAEMTDGGVDRSVECTGHIDAMISAFECVHDGWGVAVLVGVPH 300

Query: 275 KDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEIN 334
           K+AVF T P+N LNERTLKGTFFGNYKPR+D+P VV+ YMNK+LELEKFITH +PF+EIN
Sbjct: 301 KEAVFKTHPLNFLNERTLKGTFFGNYKPRSDIPCVVEKYMNKELELEKFITHTLPFAEIN 360

Query: 335 KAFEYMVKGEGLRCIISMED 354
           KAF+ M+KGEGLRCII+M D
Sbjct: 361 KAFDLMLKGEGLRCIITMAD 380

Solanum lycopersicum (taxid: 4081)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

>sp|P17648|ADH_FRAAN Alcohol dehydrogenase OS=Fragaria ananassa GN=ADH PE=3 SV=2

 Score =  586 bits (1511), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 276/380 (72%), Positives = 322/380 (84%), Gaps = 26/380 (6%)

Query: 1   MSSTAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ 60
           MSST G ++ C+AAVAWEAGKPL+I++VEVAPPQA  VR+KI YTSLC TD+YFWE+KGQ
Sbjct: 1   MSSTEGKVICCRAAVAWEAGKPLVIEEVEVAPPQANVVRVKILYTSLCHTDVYFWEAKGQ 60

Query: 61  TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHC-------------- 106
            PLFPRI+GHEA G+VESVGEGV+DL+ GDHVLPVFTGEC +C HC              
Sbjct: 61  NPLFPRIYGHEAGGIVESVGEGVTDLKAGDHVLPVFTGECKECDHCKSEESNMCDLLRIN 120

Query: 107 ------------RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGV 154
                       RFSI G+P+ HF+GTSTFS YTV H GC+AKINP +PLDKVCILSCG+
Sbjct: 121 TDRGVMLNDGKSRFSIKGKPIYHFVGTSTFSVYTVTHVGCLAKINPQSPLDKVCILSCGI 180

Query: 155 STGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG 214
           STGLGATLNV KP++GS+VAVFGLGAVGLAAAEGAR+AGASRIIGVD +S RFEEAKKFG
Sbjct: 181 STGLGATLNVRKPKKGSTVAVFGLGAVGLAAAEGARMAGASRIIGVDLNSNRFEEAKKFG 240

Query: 215 VTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 274
           +T+FVN  +H +P+QEVIAE+TNGGVDRS+ECTGNI  MI AFECVHDGWGVAVLVGVP 
Sbjct: 241 ITEFVNPKDHKKPVQEVIAELTNGGVDRSIECTGNIQAMIPAFECVHDGWGVAVLVGVPH 300

Query: 275 KDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEIN 334
           KDAVF T P+N LNERTLKGTFFGNYKPRTD+PSVV+ YMNK+LE++KFITH++PFS+IN
Sbjct: 301 KDAVFTTHPMNFLNERTLKGTFFGNYKPRTDIPSVVEKYMNKELEVDKFITHQLPFSQIN 360

Query: 335 KAFEYMVKGEGLRCIISMED 354
           KAF+YM+KGEG+RCII+ME+
Sbjct: 361 KAFDYMLKGEGIRCIITMEE 380

This protein is responsible for the conversion of alcohols to aldehydes in plants and is important for NAD metabolism during anaerobic respiration.

Fragaria ananassa (taxid: 3747)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

>sp|P06525|ADH1_ARATH Alcohol dehydrogenase class-P OS=Arabidopsis thaliana GN=ADH1 PE=1 SV=2

 Score =  586 bits (1511), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 280/376 (74%), Positives = 320/376 (85%), Gaps = 26/376 (6%)

Query: 3   STAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTP 62
           ST G I+ CKAAVAWEAGKPL+I++VEVAPPQ  EVRIKI +TSLC TD+YFWE+KGQTP
Sbjct: 2   STTGQIIRCKAAVAWEAGKPLVIEEVEVAPPQKHEVRIKILFTSLCHTDVYFWEAKGQTP 61

Query: 63  LFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHC---------------- 106
           LFPRIFGHEA G+VESVGEGV+DL+ GDHVLP+FTGECG+CRHC                
Sbjct: 62  LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPIFTGECGECRHCHSEESNMCDLLRINTE 121

Query: 107 ----------RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVST 156
                     RFSING+P+ HFLGTSTFSEYTVVHSG VAKINP APLDKVCI+SCG+ST
Sbjct: 122 RGGMIHDGESRFSINGKPIYHFLGTSTFSEYTVVHSGQVAKINPDAPLDKVCIVSCGLST 181

Query: 157 GLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT 216
           GLGATLNVAKP++G SVA+FGLGAVGL AAEGARIAGASRIIGVD +SKRF++AK+FGVT
Sbjct: 182 GLGATLNVAKPKKGQSVAIFGLGAVGLGAAEGARIAGASRIIGVDFNSKRFDQAKEFGVT 241

Query: 217 DFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD 276
           + VN  +HD+PIQ+VIAEMT+GGVDRSVECTG++  MI AFECVHDGWGVAVLVGVPSKD
Sbjct: 242 ECVNPKDHDKPIQQVIAEMTDGGVDRSVECTGSVQAMIQAFECVHDGWGVAVLVGVPSKD 301

Query: 277 AVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKA 336
             F T P+N LNERTLKGTFFGNYKP+TD+P VV+ YMNK+LELEKFITH +PFSEINKA
Sbjct: 302 DAFKTHPMNFLNERTLKGTFFGNYKPKTDIPGVVEKYMNKELELEKFITHTVPFSEINKA 361

Query: 337 FEYMVKGEGLRCIISM 352
           F+YM+KGE +RCII+M
Sbjct: 362 FDYMLKGESIRCIITM 377

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

>sp|Q2R8Z5|ADH1_ORYSJ Alcohol dehydrogenase 1 OS=Oryza sativa subsp. japonica GN=ADH1 PE=2 SV=2

 Score =  584 bits (1506), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 275/378 (72%), Positives = 320/378 (84%), Gaps = 26/378 (6%)

Query: 3   STAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTP 62
           +TAG ++ CKAAVAWEA KPL+I++VEVAPPQAMEVR+KI +TSLC TD+YFWE+KGQTP
Sbjct: 2   ATAGKVIKCKAAVAWEAAKPLVIEEVEVAPPQAMEVRVKILFTSLCHTDVYFWEAKGQTP 61

Query: 63  LFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHC---------------- 106
           +FPRIFGHEA G+VESVGEGV+DL  GDHVLPVFTGEC +C HC                
Sbjct: 62  VFPRIFGHEAGGIVESVGEGVTDLAPGDHVLPVFTGECKECAHCKSAESNMCDLLRINTD 121

Query: 107 ----------RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVST 156
                     RFSING+P+ HF+GTSTFSEYTV+H GCVAKINP APLDKVC+LSCG+ST
Sbjct: 122 RGVMIGDGKSRFSINGKPIYHFVGTSTFSEYTVMHVGCVAKINPAAPLDKVCVLSCGIST 181

Query: 157 GLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT 216
           GLGAT+NVAKP +GS+VA+FGLGAVGLAAAEGARIAGASRIIG+D ++ RFEEA+KFG T
Sbjct: 182 GLGATINVAKPPKGSTVAIFGLGAVGLAAAEGARIAGASRIIGIDLNANRFEEARKFGCT 241

Query: 217 DFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD 276
           +FVN  +HD+P+Q+V+AEMTNGGVDRSVECTGNI+ MI AFECVHDGWGVAVLVGVP KD
Sbjct: 242 EFVNPKDHDKPVQQVLAEMTNGGVDRSVECTGNINAMIQAFECVHDGWGVAVLVGVPHKD 301

Query: 277 AVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKA 336
           A F T P+N LNERTLKGTFFGNYKPRTDLP+VV++YM K+LE+EKFITH +PFSEIN A
Sbjct: 302 AEFKTHPMNFLNERTLKGTFFGNYKPRTDLPNVVELYMKKELEVEKFITHSVPFSEINTA 361

Query: 337 FEYMVKGEGLRCIISMED 354
           F+ M KGEG+RCII ME+
Sbjct: 362 FDLMHKGEGIRCIIRMEN 379

Oryza sativa subsp. japonica (taxid: 39947)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

>sp|Q75ZX4|ADH1_ORYSI Alcohol dehydrogenase 1 OS=Oryza sativa subsp. indica GN=ADH1 PE=2 SV=1

 Score =  584 bits (1506), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 275/378 (72%), Positives = 320/378 (84%), Gaps = 26/378 (6%)

Query: 3   STAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTP 62
           +TAG ++ CKAAVAWEA KPL+I++VEVAPPQAMEVR+KI +TSLC TD+YFWE+KGQTP
Sbjct: 2   ATAGKVIKCKAAVAWEAAKPLVIEEVEVAPPQAMEVRVKILFTSLCHTDVYFWEAKGQTP 61

Query: 63  LFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHC---------------- 106
           +FPRIFGHEA G+VESVGEGV+DL  GDHVLPVFTGEC +C HC                
Sbjct: 62  VFPRIFGHEAGGIVESVGEGVTDLAPGDHVLPVFTGECKECAHCKSAESNMCDLLRINTD 121

Query: 107 ----------RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVST 156
                     RFSING+P+ HF+GTSTFSEYTV+H GCVAKINP APLDKVC+LSCG+ST
Sbjct: 122 RGVMIGDGKSRFSINGKPIYHFVGTSTFSEYTVMHVGCVAKINPAAPLDKVCVLSCGIST 181

Query: 157 GLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT 216
           GLGAT+NVAKP +GS+VA+FGLGAVGLAAAEGARIAGASRIIG+D ++ RFEEA+KFG T
Sbjct: 182 GLGATINVAKPPKGSTVAIFGLGAVGLAAAEGARIAGASRIIGIDLNANRFEEARKFGCT 241

Query: 217 DFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD 276
           +FVN  +HD+P+Q+V+AEMTNGGVDRSVECTGNI+ MI AFECVHDGWGVAVLVGVP KD
Sbjct: 242 EFVNPKDHDKPVQQVLAEMTNGGVDRSVECTGNINAMIQAFECVHDGWGVAVLVGVPHKD 301

Query: 277 AVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKA 336
           A F T P+N LNERTLKGTFFGNYKPRTDLP+VV++YM K+LE+EKFITH +PFSEIN A
Sbjct: 302 AEFKTHPMNFLNERTLKGTFFGNYKPRTDLPNVVELYMKKELEVEKFITHSVPFSEINTA 361

Query: 337 FEYMVKGEGLRCIISMED 354
           F+ M KGEG+RCII ME+
Sbjct: 362 FDLMHKGEGIRCIIRMEN 379

Oryza sativa subsp. indica (taxid: 39946)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

>sp|P25141|ADH1_PETHY Alcohol dehydrogenase 1 OS=Petunia hybrida GN=ADH1 PE=3 SV=1

 Score =  584 bits (1505), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 276/379 (72%), Positives = 323/379 (85%), Gaps = 27/379 (7%)

Query: 2   SSTAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT 61
           S+TAG ++ CKAAVAWEAGKPL+I++VEVAPPQ MEVR+KI +TSLC TD+YFWE+KGQT
Sbjct: 3   SNTAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKMEVRLKILFTSLCHTDVYFWEAKGQT 62

Query: 62  PLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHC--------------- 106
           PLFPRIFGHEA G+VESVGEGV+DL+ GDHVLPVFTGEC  CRHC               
Sbjct: 63  PLFPRIFGHEAGGIVESVGEGVTDLKPGDHVLPVFTGECQQCRHCKSEESNMCDLLRINT 122

Query: 107 -----------RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVS 155
                      RFS +G+P+ HF+GTSTFSEYTV HSGCV KI+P APLDKVC+LSCG+S
Sbjct: 123 DRGVMIHDGQTRFSKDGKPIYHFVGTSTFSEYTVCHSGCVTKIDPQAPLDKVCVLSCGIS 182

Query: 156 TGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV 215
           TGLGATLNVAKP +GS+VA+FGLGAVGLAAAEGARIAGASRIIGVD +  RF +AKKFGV
Sbjct: 183 TGLGATLNVAKPTKGSTVAIFGLGAVGLAAAEGARIAGASRIIGVDLNPSRFNDAKKFGV 242

Query: 216 TDFVNTSEH-DRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 274
           T+FVN  +H D+P+Q+VIAEMT+GGVDRSVECTGN++ MISAFECVHDGWGVAVLVGVP+
Sbjct: 243 TEFVNPKDHGDKPVQQVIAEMTDGGVDRSVECTGNVNAMISAFECVHDGWGVAVLVGVPN 302

Query: 275 KDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEIN 334
           KD  F T P+N+LNERTLKGTFFGNYKP++D+PSVVD YM K+LELEKFITH++PFSEIN
Sbjct: 303 KDDAFKTHPMNLLNERTLKGTFFGNYKPKSDIPSVVDKYMKKELELEKFITHQVPFSEIN 362

Query: 335 KAFEYMVKGEGLRCIISME 353
           KAF+YM+KGE +RC+I+ME
Sbjct: 363 KAFDYMLKGESIRCMITME 381

This protein is responsible for the conversion of alcohols to aldehydes in plants and is important for NAD metabolism during anaerobic respiration.

Petunia hybrida (taxid: 4102)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	354
118487636	380	unknown [Populus trichocarpa]	0.994	0.926	0.764	1e-171
224093368	380	predicted protein [Populus trichocarpa]	0.994	0.926	0.764	1e-171
224093370	380	predicted protein [Populus trichocarpa]	0.994	0.926	0.761	1e-171
359477028	415	PREDICTED: alcohol dehydrogenase 1 [Viti	0.997	0.850	0.751	1e-170
295148815	380	alcohol dehydrogenase I [Vitis aestivali	0.997	0.928	0.757	1e-170
225431501	380	PREDICTED: alcohol dehydrogenase 1 [Viti	0.994	0.926	0.756	1e-170
225431503	380	PREDICTED: alcohol dehydrogenase 1 [Viti	0.997	0.928	0.751	1e-170
296088562	380	unnamed protein product [Vitis vinifera]	0.997	0.928	0.751	1e-170
9885274	380	alcohol dehydrogenase 2 [Vitis vinifera]	0.997	0.928	0.746	1e-170
255587152	380	alcohol dehydrogenase, putative [Ricinus	1.0	0.931	0.757	1e-170

>gi|118487636|gb|ABK95643.1| unknown [Populus trichocarpa]

 Score =  606 bits (1563), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 289/378 (76%), Positives = 327/378 (86%), Gaps = 26/378 (6%)

Query: 1   MSSTAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ 60
           MSSTAG ++ CKAAVAWEAGKPL+I++VEVAPPQAMEVR+KI +TSLC TD+YFWE+KGQ
Sbjct: 1   MSSTAGQVICCKAAVAWEAGKPLVIEEVEVAPPQAMEVRLKILFTSLCHTDVYFWEAKGQ 60

Query: 61  TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHC-------------- 106
           TPLFPRIFGHEA G+VESVGEGV+DL+ GDHVLPVFTGEC +CRHC              
Sbjct: 61  TPLFPRIFGHEAGGIVESVGEGVTDLKPGDHVLPVFTGECKECRHCKSEESNMCDLLRIN 120

Query: 107 ------------RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGV 154
                       RFSI G+P+ HF+GTSTFSEYTVVH GCVAKINP APLDKVC+LSCG+
Sbjct: 121 TDRGVMLNDGKSRFSIRGQPIYHFVGTSTFSEYTVVHVGCVAKINPAAPLDKVCVLSCGI 180

Query: 155 STGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG 214
           STGLGATLNVAKP++GSSVA+FGLGAVGLAAAEGARIAGASRIIGVD +S RF+EAKKFG
Sbjct: 181 STGLGATLNVAKPKKGSSVAIFGLGAVGLAAAEGARIAGASRIIGVDLNSNRFDEAKKFG 240

Query: 215 VTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 274
           VT+FVN  +H++P+QEVIAEMTNGGVDRSVECTG+++ MISAFECVHDGWGVAVLVGVP+
Sbjct: 241 VTEFVNPKDHNKPVQEVIAEMTNGGVDRSVECTGSVNAMISAFECVHDGWGVAVLVGVPN 300

Query: 275 KDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEIN 334
           KD  F T P+NVLNERTLKGTFFGNYKPR+DLPSVV+ YMNK+LELEKFITH +PFSEIN
Sbjct: 301 KDDSFKTHPMNVLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELELEKFITHEVPFSEIN 360

Query: 335 KAFEYMVKGEGLRCIISM 352
           KAFEYM+ G GLRCII M
Sbjct: 361 KAFEYMLSGAGLRCIIRM 378

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224093368|ref|XP_002309899.1| predicted protein [Populus trichocarpa] gi|222852802|gb|EEE90349.1| predicted protein [Populus trichocarpa]

 Score =  606 bits (1562), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 289/378 (76%), Positives = 327/378 (86%), Gaps = 26/378 (6%)

Query: 1   MSSTAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ 60
           MSSTAG ++ CKAAVAWEAGKPL++++VEVAPPQAMEVR+KI +TSLC TD+YFWE+KGQ
Sbjct: 1   MSSTAGQVIRCKAAVAWEAGKPLVMEEVEVAPPQAMEVRLKILFTSLCHTDVYFWEAKGQ 60

Query: 61  TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHC-------------- 106
           TPLFPRIFGHEA G+VESVGEGV+DL+ GDHVLPVFTGEC +CRHC              
Sbjct: 61  TPLFPRIFGHEAGGIVESVGEGVTDLKPGDHVLPVFTGECKECRHCKSEESNMCDLLRIN 120

Query: 107 ------------RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGV 154
                       RFSI G+P+ HF+GTSTFSEYTVVH GCVAKINP APLDKVC+LSCG+
Sbjct: 121 TDRGVMLNDGKSRFSIKGQPIYHFVGTSTFSEYTVVHVGCVAKINPAAPLDKVCVLSCGI 180

Query: 155 STGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG 214
           STGLGATLNVAKP++GSSVA+FGLGAVGLAAAEGARIAGASRIIGVD +S RF+EAKKFG
Sbjct: 181 STGLGATLNVAKPKKGSSVAIFGLGAVGLAAAEGARIAGASRIIGVDLNSNRFDEAKKFG 240

Query: 215 VTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 274
           VT+FVN  +H++P+QEVIAEMTNGGVDRSVECTG+I+ MISAFECVHDGWGVAVLVGVP+
Sbjct: 241 VTEFVNPKDHNKPVQEVIAEMTNGGVDRSVECTGSINAMISAFECVHDGWGVAVLVGVPN 300

Query: 275 KDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEIN 334
           KD  F T P+NVLNERTLKGTFFGNYKPR+DLPSVV+ YMNK+LELEKFITH +PFSEIN
Sbjct: 301 KDDSFKTHPMNVLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELELEKFITHEVPFSEIN 360

Query: 335 KAFEYMVKGEGLRCIISM 352
           KAFEYM+ G GLRCII M
Sbjct: 361 KAFEYMLSGAGLRCIIRM 378

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224093370|ref|XP_002309900.1| predicted protein [Populus trichocarpa] gi|222852803|gb|EEE90350.1| predicted protein [Populus trichocarpa]

 Score =  605 bits (1561), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 288/378 (76%), Positives = 327/378 (86%), Gaps = 26/378 (6%)

Query: 1   MSSTAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ 60
           MSSTAG ++ CKAAVAWEAGKPL+I++VEVAPPQAMEVR+KI +TSLC TD+YFWE+KGQ
Sbjct: 1   MSSTAGQVICCKAAVAWEAGKPLVIEEVEVAPPQAMEVRLKILFTSLCHTDVYFWEAKGQ 60

Query: 61  TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHC-------------- 106
           TPLFPRIFGHEA G+VESVGEGV+DL+ GDHVLPVFTGEC +CRHC              
Sbjct: 61  TPLFPRIFGHEAGGIVESVGEGVTDLKPGDHVLPVFTGECKECRHCKSEESNMCDLLRIN 120

Query: 107 ------------RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGV 154
                       RFSI G+P+ HF+GTSTFSEYTVVH GCVAKINP APLDKVC+LSCG+
Sbjct: 121 TDRGVMLNDGKSRFSIRGQPIYHFVGTSTFSEYTVVHVGCVAKINPAAPLDKVCVLSCGI 180

Query: 155 STGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG 214
           STGLGATLNVAKP++GSS+A+FGLGAVGLAAAEGARIAGASRIIGVD +S RF+EAKKFG
Sbjct: 181 STGLGATLNVAKPKKGSSIAIFGLGAVGLAAAEGARIAGASRIIGVDLNSNRFDEAKKFG 240

Query: 215 VTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 274
           VT+FVN  +H++P+QEVIAEMTNGGVDRSVECTG+++ MISAFECVHDGWGVAVLVGVP+
Sbjct: 241 VTEFVNPKDHNKPVQEVIAEMTNGGVDRSVECTGSVNAMISAFECVHDGWGVAVLVGVPN 300

Query: 275 KDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEIN 334
           KD  F T P+NVLNERTLKGTFFGNYKPR+DLPSVV+ YMNK+LELEKFITH +PFSEIN
Sbjct: 301 KDDSFKTHPMNVLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELELEKFITHEVPFSEIN 360

Query: 335 KAFEYMVKGEGLRCIISM 352
           KAFEYM+ G GLRCII M
Sbjct: 361 KAFEYMLSGAGLRCIIRM 378

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359477028|ref|XP_002281349.2| PREDICTED: alcohol dehydrogenase 1 [Vitis vinifera]

 Score =  605 bits (1559), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 285/379 (75%), Positives = 326/379 (86%), Gaps = 26/379 (6%)

Query: 1   MSSTAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ 60
           MS TAG ++ CKAAVAWEAGKPL+I++VEVAPPQ MEVR+KI +TSLC TD+YFWE+KGQ
Sbjct: 36  MSGTAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQVMEVRLKILFTSLCHTDVYFWEAKGQ 95

Query: 61  TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHC-------------- 106
           TPLFPRIFGHEA G+VESVGEGV+DL+ GDHVLPVFTGEC +CRHC              
Sbjct: 96  TPLFPRIFGHEAGGIVESVGEGVTDLQSGDHVLPVFTGECKECRHCKSEESNMCDLLRIN 155

Query: 107 ------------RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGV 154
                       RFSING+P+ HF+GTSTFSEYTVVH GCVAKINP APLDKVC+LSCG+
Sbjct: 156 TDRGVMLSDNKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPAAPLDKVCVLSCGI 215

Query: 155 STGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG 214
           STGLGATLNVAKP +GSSVA+FGLGAVGLAAAEGARIAGASRIIG+D + KRF +AKKFG
Sbjct: 216 STGLGATLNVAKPWKGSSVAIFGLGAVGLAAAEGARIAGASRIIGIDLNPKRFNDAKKFG 275

Query: 215 VTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 274
           VT+FVN  +HD+P+QEVIAEMT+GGVDRSVECTGN++ MISAFECVHDGWGVAVLVGVP+
Sbjct: 276 VTEFVNPKDHDKPVQEVIAEMTDGGVDRSVECTGNVNAMISAFECVHDGWGVAVLVGVPN 335

Query: 275 KDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEIN 334
           KD  F T P+N+LNERTLKGTFFGNYKPR+DLPSVV+ YMNK+LELEKFITH +PF+EIN
Sbjct: 336 KDDSFKTHPVNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELELEKFITHEVPFAEIN 395

Query: 335 KAFEYMVKGEGLRCIISME 353
           KAFEYM+ G+GLRCII M+
Sbjct: 396 KAFEYMLSGDGLRCIIRMD 414

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|295148815|gb|ADF80905.1| alcohol dehydrogenase I [Vitis aestivalis]

 Score =  603 bits (1555), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 287/379 (75%), Positives = 326/379 (86%), Gaps = 26/379 (6%)

Query: 1   MSSTAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ 60
           MS TAG ++ CKAAVAWEAGKPL+I++VEVAPPQAMEVR+KI YTSLC TD+YFWE+KGQ
Sbjct: 1   MSGTAGQVICCKAAVAWEAGKPLVIEEVEVAPPQAMEVRLKILYTSLCHTDVYFWEAKGQ 60

Query: 61  TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHC-------------- 106
           TPLFPRIFGHEA G+VESVGEGV+DL+ GDHVLP+FTGEC DC HC              
Sbjct: 61  TPLFPRIFGHEAGGIVESVGEGVTDLKPGDHVLPIFTGECKDCAHCKSEESNLCDLLRIN 120

Query: 107 ------------RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGV 154
                       RF+I G+P+ HFLGTSTFSEYTVVH GCVAKINPLAPLDKVC+LSCG+
Sbjct: 121 TDRGVMIHDGKSRFTIKGKPIYHFLGTSTFSEYTVVHVGCVAKINPLAPLDKVCVLSCGI 180

Query: 155 STGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG 214
           STGLGATLNVAKP +GS+VAVFGLGAVGLAAAEGARIAGASRIIGVD + KR+EEAKKFG
Sbjct: 181 STGLGATLNVAKPTKGSTVAVFGLGAVGLAAAEGARIAGASRIIGVDLNPKRYEEAKKFG 240

Query: 215 VTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 274
           VTDFVN  +H++ +QEVI EMT GGVDRS+ECTGN++ MISAFECVHDGWGVAV+VGVP+
Sbjct: 241 VTDFVNPKDHEKSVQEVIVEMTGGGVDRSLECTGNVNAMISAFECVHDGWGVAVIVGVPN 300

Query: 275 KDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEIN 334
           KD VF T PIN+LNERTLKGTFFGNYKPR+D+P+VV+ YMNK+LE+EKFITH +PFSEIN
Sbjct: 301 KDDVFKTHPINLLNERTLKGTFFGNYKPRSDIPAVVEKYMNKELEVEKFITHSVPFSEIN 360

Query: 335 KAFEYMVKGEGLRCIISME 353
           KAFEYM+KGEGLRCII ME
Sbjct: 361 KAFEYMLKGEGLRCIIHME 379

Source: Vitis aestivalis

Species: Vitis aestivalis

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225431501|ref|XP_002281334.1| PREDICTED: alcohol dehydrogenase 1 [Vitis vinifera] gi|296088563|emb|CBI37554.3| unnamed protein product [Vitis vinifera]

 Score =  603 bits (1555), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 286/378 (75%), Positives = 326/378 (86%), Gaps = 26/378 (6%)

Query: 1   MSSTAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ 60
           MSSTAG ++ CKAAVAWEAGKPL+I++VEVAPPQ MEVR+KI +TSLC TD+YFWE+KGQ
Sbjct: 1   MSSTAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQVMEVRLKILFTSLCHTDVYFWEAKGQ 60

Query: 61  TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHC-------------- 106
           TPLFPRIFGHEA G+VESVGEGV+DL+ GDHVLPVFTGEC +CRHC              
Sbjct: 61  TPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECRHCKSEESNMCDLLRIN 120

Query: 107 ------------RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGV 154
                       RFSING+P+ HF+GTSTFSEYTVVH GCVAKINP APLDKVC+LSCG+
Sbjct: 121 TDRGVMLSDNKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPAAPLDKVCVLSCGI 180

Query: 155 STGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG 214
           STGLGATLNVAKP +GSSVA+FGLGAVGLAAAEGARIAGASRIIG+D + KRF +AKKFG
Sbjct: 181 STGLGATLNVAKPWKGSSVAIFGLGAVGLAAAEGARIAGASRIIGIDLNPKRFNDAKKFG 240

Query: 215 VTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 274
           VT+FVN  +HD+P+QEVIAEMT+GGVDRSVECTGN++ MISAFECVHDGWGVAVLVGVP+
Sbjct: 241 VTEFVNPKDHDKPVQEVIAEMTDGGVDRSVECTGNVNAMISAFECVHDGWGVAVLVGVPN 300

Query: 275 KDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEIN 334
           KD  F T P+N+LNERTLKGTFFGNYKPR+DLPSVV+ YMNK+LELEKFITH +PF+EIN
Sbjct: 301 KDDSFKTHPVNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELELEKFITHEVPFAEIN 360

Query: 335 KAFEYMVKGEGLRCIISM 352
           KAFEYM+ G+GLRCII M
Sbjct: 361 KAFEYMLSGDGLRCIIRM 378

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225431503|ref|XP_002281363.1| PREDICTED: alcohol dehydrogenase 1 [Vitis vinifera]

 Score =  603 bits (1554), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 285/379 (75%), Positives = 327/379 (86%), Gaps = 26/379 (6%)

Query: 1   MSSTAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ 60
           MS TAG ++ CKAAVAWEAGKPL+I++VEVAPPQAMEVR+KI +TSLC TD+YFWE+KGQ
Sbjct: 1   MSGTAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQAMEVRLKILFTSLCHTDVYFWEAKGQ 60

Query: 61  TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHC-------------- 106
           TPLFPRIFGHEA G+VESVGEGV+DL+ GDHVLPVFTGEC DCRHC              
Sbjct: 61  TPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKDCRHCKSEESNMCDLLRIN 120

Query: 107 ------------RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGV 154
                       RFSING+P+ HF+GTSTFSEYTVVH GCVAKINP APLDKVC+LSCG+
Sbjct: 121 TDRGVMLNDNKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPAAPLDKVCVLSCGI 180

Query: 155 STGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG 214
           STGLGATLNVA+P +GSSVA+FGLGAVGLAAAEGARIAGA+RIIG+D + KRF EAKKFG
Sbjct: 181 STGLGATLNVARPWKGSSVAIFGLGAVGLAAAEGARIAGAARIIGIDLNPKRFNEAKKFG 240

Query: 215 VTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 274
           VT+FVN  +HD+P+QEVIAEMT GGVDRSVECTGN++ MISAFECVHDGWGVAVLVGVP+
Sbjct: 241 VTEFVNPKDHDKPVQEVIAEMTGGGVDRSVECTGNVNAMISAFECVHDGWGVAVLVGVPN 300

Query: 275 KDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEIN 334
           KD  F T P+N+LNERTLKGTFFGNYKPR+DLPSVV+ YMNK+LE+EKFITH +PF+EIN
Sbjct: 301 KDDSFKTHPVNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHEVPFAEIN 360

Query: 335 KAFEYMVKGEGLRCIISME 353
           KAFEYM++G+GLRCII M+
Sbjct: 361 KAFEYMLQGDGLRCIIRMD 379

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296088562|emb|CBI37553.3| unnamed protein product [Vitis vinifera]

 Score =  602 bits (1553), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 285/379 (75%), Positives = 326/379 (86%), Gaps = 26/379 (6%)

Query: 1   MSSTAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ 60
           MS TAG ++ CKAAVAWEAGKPL+I++VEVAPPQ MEVR+KI +TSLC TD+YFWE+KGQ
Sbjct: 1   MSGTAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQVMEVRLKILFTSLCHTDVYFWEAKGQ 60

Query: 61  TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHC-------------- 106
           TPLFPRIFGHEA G+VESVGEGV+DL+ GDHVLPVFTGEC +CRHC              
Sbjct: 61  TPLFPRIFGHEAGGIVESVGEGVTDLQSGDHVLPVFTGECKECRHCKSEESNMCDLLRIN 120

Query: 107 ------------RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGV 154
                       RFSING+P+ HF+GTSTFSEYTVVH GCVAKINP APLDKVC+LSCG+
Sbjct: 121 TDRGVMLSDNKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPAAPLDKVCVLSCGI 180

Query: 155 STGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG 214
           STGLGATLNVAKP +GSSVA+FGLGAVGLAAAEGARIAGASRIIG+D + KRF +AKKFG
Sbjct: 181 STGLGATLNVAKPWKGSSVAIFGLGAVGLAAAEGARIAGASRIIGIDLNPKRFNDAKKFG 240

Query: 215 VTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 274
           VT+FVN  +HD+P+QEVIAEMT+GGVDRSVECTGN++ MISAFECVHDGWGVAVLVGVP+
Sbjct: 241 VTEFVNPKDHDKPVQEVIAEMTDGGVDRSVECTGNVNAMISAFECVHDGWGVAVLVGVPN 300

Query: 275 KDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEIN 334
           KD  F T P+N+LNERTLKGTFFGNYKPR+DLPSVV+ YMNK+LELEKFITH +PF+EIN
Sbjct: 301 KDDSFKTHPVNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELELEKFITHEVPFAEIN 360

Query: 335 KAFEYMVKGEGLRCIISME 353
           KAFEYM+ G+GLRCII M+
Sbjct: 361 KAFEYMLSGDGLRCIIRMD 379

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|9885274|gb|AAG01382.1|AF194174_1 alcohol dehydrogenase 2 [Vitis vinifera] gi|18027092|gb|AAL55726.1|AF271074_1 alcohol dehydrogenase 2 [Vitis vinifera]

 Score =  602 bits (1553), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 283/379 (74%), Positives = 327/379 (86%), Gaps = 26/379 (6%)

Query: 1   MSSTAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ 60
           MSSTAG ++ CKAAVAWEAGKPL+I++VEVAPPQ MEVR+KI +TSLC TD+YFWE+KGQ
Sbjct: 1   MSSTAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQVMEVRLKILFTSLCHTDVYFWEAKGQ 60

Query: 61  TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHC-------------- 106
           TPLFPRIFGHEA G+VESVGEGV+DL+ GDHVLPVFTGEC +CRHC              
Sbjct: 61  TPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECRHCKSEESNMCDLLRIN 120

Query: 107 ------------RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGV 154
                       RFSING+PV HF+GTSTFSEYTV+H GCVAKINP APLDKVC+LSCG+
Sbjct: 121 TDRGVMLSDNKSRFSINGKPVYHFVGTSTFSEYTVIHVGCVAKINPAAPLDKVCVLSCGI 180

Query: 155 STGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG 214
           STGLGATLNVAKP +GSS+A+FGLGAVGLAAAEGARIAGA+RIIG+D + KRF +AKKFG
Sbjct: 181 STGLGATLNVAKPSKGSSIAIFGLGAVGLAAAEGARIAGAARIIGIDLNPKRFNDAKKFG 240

Query: 215 VTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 274
           VT+F+N  +HD+PIQEVIAEMT+GGVDRSVECTGN++ MISAFECVHDGWGVAVLVGVP+
Sbjct: 241 VTEFLNPKDHDKPIQEVIAEMTDGGVDRSVECTGNVNAMISAFECVHDGWGVAVLVGVPN 300

Query: 275 KDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEIN 334
           KD  F T P+N+LNERTLKGTFFGNYKPR+DLPSVV+ YMNK+LE+EKFITH +PF+EIN
Sbjct: 301 KDDSFKTHPVNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHEVPFAEIN 360

Query: 335 KAFEYMVKGEGLRCIISME 353
           KAFEYM+ G+GLRCII M+
Sbjct: 361 KAFEYMLSGDGLRCIIRMD 379

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255587152|ref|XP_002534157.1| alcohol dehydrogenase, putative [Ricinus communis] gi|223525768|gb|EEF28223.1| alcohol dehydrogenase, putative [Ricinus communis]

 Score =  602 bits (1552), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 288/380 (75%), Positives = 327/380 (86%), Gaps = 26/380 (6%)

Query: 1   MSSTAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ 60
           M+ +AG ++ CKAAVAWEAGKPL+I++VEVAPPQA EVR+KI +TSLC TD+YFWE+KGQ
Sbjct: 1   MACSAGQVIRCKAAVAWEAGKPLLIEEVEVAPPQANEVRLKILFTSLCHTDVYFWEAKGQ 60

Query: 61  TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHC-------------- 106
            PLFPRI+GHEA G+VESVGEGV+DL+ GDHVLPVFTGEC +C HC              
Sbjct: 61  NPLFPRIYGHEAGGIVESVGEGVTDLKPGDHVLPVFTGECKECAHCKSEESNMCSLLRIN 120

Query: 107 ------------RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGV 154
                       RFSING+P+ HF+GTSTFSEYTVVH GC+AKINPLAPLDKVC+LSCG+
Sbjct: 121 TDRGVMLNDGNSRFSINGKPIYHFVGTSTFSEYTVVHVGCLAKINPLAPLDKVCVLSCGI 180

Query: 155 STGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG 214
           STGLGATLNVAKP +GSSV VFGLGAVGLAAAEGARIAGASRIIGVD +S RFEEAKKFG
Sbjct: 181 STGLGATLNVAKPAKGSSVVVFGLGAVGLAAAEGARIAGASRIIGVDVNSSRFEEAKKFG 240

Query: 215 VTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 274
           VT+FVN  ++ +P+QEVIAEMT+GGVDRSVECTGNID MISAFECVHDGWGVAVLVGVP 
Sbjct: 241 VTEFVNPKDYKKPVQEVIAEMTDGGVDRSVECTGNIDAMISAFECVHDGWGVAVLVGVPH 300

Query: 275 KDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEIN 334
           KDAVF T P+N+LNERTLKGTFFGNYKPR+DLPSVV+ YM+K+LELEKFITH +PFSEIN
Sbjct: 301 KDAVFRTHPVNLLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELELEKFITHSVPFSEIN 360

Query: 335 KAFEYMVKGEGLRCIISMED 354
           KAFEYM+KGEGLRCII ME+
Sbjct: 361 KAFEYMLKGEGLRCIIRMEE 380

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	354
TAIR|locus:2025237	379	ADH1 "alcohol dehydrogenase 1"	0.694	0.649	0.691	6.2e-129
TAIR|locus:2184575	381	AT5G24760 [Arabidopsis thalian	0.692	0.643	0.449	1.5e-83
ZFIN|ZDB-GENE-011003-1	376	adh5 "alcohol dehydrogenase 5"	0.689	0.648	0.430	1.2e-77
UNIPROTKB|F1S0C1	374	ADH5 "Uncharacterized protein"	0.694	0.657	0.434	1.2e-75
UNIPROTKB|P11766	374	ADH5 "Alcohol dehydrogenase cl	0.694	0.657	0.434	2e-75
UNIPROTKB|Q3ZC42	374	ADH5 "Alcohol dehydrogenase cl	0.694	0.657	0.422	8.5e-75
RGD|2292706	374	Adh5 "alcohol dehydrogenase 5	0.694	0.657	0.426	1.1e-74
UNIPROTKB|P12711	374	Adh5 "Alcohol dehydrogenase cl	0.694	0.657	0.426	1.1e-74
UNIPROTKB|F1NI89	370	ADH5 "Uncharacterized protein"	0.689	0.659	0.409	4.7e-74
UNIPROTKB|F1NKS5	374	ADH5 "Uncharacterized protein"	0.689	0.652	0.409	4.7e-74

TAIR|locus:2025237 ADH1 "alcohol dehydrogenase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 908 (324.7 bits), Expect = 6.2e-129, Sum P(2) = 6.2e-129
 Identities = 170/246 (69%), Positives = 197/246 (80%)

Query:   107 RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 166
             RFSING+P+ HFLGTSTFSEYTVVHSG VAKINP APLDKVCI+SCG+STGLGATLNVAK
Sbjct:   132 RFSINGKPIYHFLGTSTFSEYTVVHSGQVAKINPDAPLDKVCIVSCGLSTGLGATLNVAK 191

Query:   167 PERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNTSEHDR 226
             P++                              VD +SKRF++AK+FGVT+ VN  +HD+
Sbjct:   192 PKKGQSVAIFGLGAVGLGAAEGARIAGASRIIGVDFNSKRFDQAKEFGVTECVNPKDHDK 251

Query:   227 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV 286
             PIQ+VIAEMT+GGVDRSVECTG++  MI AFECVHDGWGVAVLVGVPSKD  F T P+N 
Sbjct:   252 PIQQVIAEMTDGGVDRSVECTGSVQAMIQAFECVHDGWGVAVLVGVPSKDDAFKTHPMNF 311

Query:   287 LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGL 346
             LNERTLKGTFFGNYKP+TD+P VV+ YMNK+LELEKFITH +PFSEINKAF+YM+KGE +
Sbjct:   312 LNERTLKGTFFGNYKPKTDIPGVVEKYMNKELELEKFITHTVPFSEINKAFDYMLKGESI 371

Query:   347 RCIISM 352
             RCII+M
Sbjct:   372 RCIITM 377

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0045333 "cellular respiration" evidence=TAS

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0006970 "response to osmotic stress" evidence=IGI

GO:0001666 "response to hypoxia" evidence=IEP;RCA

GO:0046686 "response to cadmium ion" evidence=IEP

GO:0005886 "plasma membrane" evidence=IDA

GO:0009651 "response to salt stress" evidence=IEP

GO:0005829 "cytosol" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=ISS;IMP

TAIR|locus:2184575 AT5G24760 [Arabidopsis thaliana (taxid:3702)]

 Score = 572 (206.4 bits), Expect = 1.5e-83, Sum P(2) = 1.5e-83
 Identities = 111/247 (44%), Positives = 154/247 (62%)

Query:   107 RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 166
             RFSI G+PV H+   S+FSEYTVVHSGC  K++PLAPL K+C+LSCGV+ GLGA  NVA 
Sbjct:   134 RFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPLAPLHKICLLSCGVAAGLGAAWNVAD 193

Query:   167 PERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNTSEHDR 226
              ++                              VD +  + E+AK FGVTDF+N+++   
Sbjct:   194 VQKGSSVVIFGLGTVGLSVAQGAKLRGAAQILGVDINPAKAEQAKTFGVTDFINSNDLSE 253

Query:   227 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVP-SKDAVFMTKPIN 285
             PI +VI  MT GG D S EC G+     +A +   DGWG+ V +GVP +K  V     + 
Sbjct:   254 PIPQVIKRMTGGGADFSFECVGDTGIATTALQSCSDGWGMTVTLGVPKAKPEVSAHYGL- 312

Query:   286 VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG 345
              L+ ++LKGT FG +KP++DLPS++D YMNK++ +++FITH + F EINKAF  M +G+ 
Sbjct:   313 FLSGKSLKGTLFGGWKPKSDLPSLIDKYMNKEIMIDEFITHNLSFDEINKAFVLMREGKC 372

Query:   346 LRCIISM 352
             LRC++ M
Sbjct:   373 LRCVLHM 379

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016747 "transferase activity, transferring acyl groups other than amino-acyl groups" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009611 "response to wounding" evidence=RCA

GO:0009805 "coumarin biosynthetic process" evidence=RCA

ZFIN|ZDB-GENE-011003-1 adh5 "alcohol dehydrogenase 5" [Danio rerio (taxid:7955)]

 Score = 560 (202.2 bits), Expect = 1.2e-77, Sum P(2) = 1.2e-77
 Identities = 105/244 (43%), Positives = 150/244 (61%)

Query:   107 RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 166
             RF+  G+ + HF+GTSTFSEYTVV    +AK++  APLDKVC+L CG+STG GA +N AK
Sbjct:   131 RFTCKGKQLFHFMGTSTFSEYTVVAEISLAKVDEHAPLDKVCLLGCGISTGYGAAINTAK 190

Query:   167 PERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNTSEHDR 226
              E                               +D +  +FE AKKFG T+FVN  +H +
Sbjct:   191 VEAGSTCAVFGLGAVGLAVVMGCKSAGATRIIGIDVNPDKFEIAKKFGATEFVNPKDHSK 250

Query:   227 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV 286
             PIQEV+ E+T+GGVD S EC GN+  M +A E  H GWG +V++GV        T+P  +
Sbjct:   251 PIQEVLVELTDGGVDYSFECIGNVGIMRAALEACHKGWGTSVIIGVAGAGQEISTRPFQL 310

Query:   287 LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGL 346
             +  RT KGT FG +K    +P +V+ YMNK+L +++F+TH +PF++IN+AF+ M  G+ +
Sbjct:   311 VTGRTWKGTAFGGWKSVESVPKLVNDYMNKKLMVDEFVTHTLPFAQINEAFDLMHAGKSI 370

Query:   347 RCII 350
             R ++
Sbjct:   371 RAVL 374

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0051903 "S-(hydroxymethyl)glutathione dehydrogenase activity" evidence=IEA

GO:0006069 "ethanol oxidation" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|F1S0C1 ADH5 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 559 (201.8 bits), Expect = 1.2e-75, Sum P(2) = 1.2e-75
 Identities = 107/246 (43%), Positives = 151/246 (61%)

Query:   107 RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 166
             RF+  G+ + H++GTSTFSEYTVV    VAKI+PLAPLDKVC+L CGVSTG GA +N AK
Sbjct:   129 RFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGVSTGYGAAVNTAK 188

Query:   167 PERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNTSEHDR 226
              E                               VD +  +F  AK+FG ++ +N  +  +
Sbjct:   189 VEPGSTCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGASECINPQDFSK 248

Query:   227 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV 286
             PIQEV+ EMT+GGVD S EC GN+  M +A E  H GWGV+V+VGV +      T+P  +
Sbjct:   249 PIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQL 308

Query:   287 LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGL 346
             +  RT KGT FG +K    +P +V  YM+K++++++F+TH +PF +IN+AFE M  G+ +
Sbjct:   309 VTGRTWKGTAFGGWKSVESIPKLVSEYMSKKIKVDEFVTHNLPFDQINEAFELMHAGKSI 368

Query:   347 RCIISM 352
             R +I +
Sbjct:   369 RTVIKL 374

GO:0051903 "S-(hydroxymethyl)glutathione dehydrogenase activity" evidence=IEA

GO:0051775 "response to redox state" evidence=IEA

GO:0051409 "response to nitrosative stress" evidence=IEA

GO:0046294 "formaldehyde catabolic process" evidence=IEA

GO:0045777 "positive regulation of blood pressure" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0032496 "response to lipopolysaccharide" evidence=IEA

GO:0018467 "formaldehyde dehydrogenase activity" evidence=IEA

GO:0018119 "peptidyl-cysteine S-nitrosylation" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0005504 "fatty acid binding" evidence=IEA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=IEA

GO:0003016 "respiratory system process" evidence=IEA

GO:0001523 "retinoid metabolic process" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006069 "ethanol oxidation" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|P11766 ADH5 "Alcohol dehydrogenase class-3" [Homo sapiens (taxid:9606)]

 Score = 557 (201.1 bits), Expect = 2.0e-75, Sum P(2) = 2.0e-75
 Identities = 107/246 (43%), Positives = 150/246 (60%)

Query:   107 RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 166
             RF+  G+ + H++GTSTFSEYTVV    VAKI+PLAPLDKVC+L CG+STG GA +N AK
Sbjct:   129 RFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAAVNTAK 188

Query:   167 PERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNTSEHDR 226
              E                               VD +  +F  AK+FG T+ +N  +  +
Sbjct:   189 LEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDFSK 248

Query:   227 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV 286
             PIQEV+ EMT+GGVD S EC GN+  M +A E  H GWGV+V+VGV +      T+P  +
Sbjct:   249 PIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQL 308

Query:   287 LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGL 346
             +  RT KGT FG +K    +P +V  YM+K++++++F+TH + F EINKAFE M  G+ +
Sbjct:   309 VTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINKAFELMHSGKSI 368

Query:   347 RCIISM 352
             R ++ +
Sbjct:   369 RTVVKI 374

GO:0000166 "nucleotide binding" evidence=IEA

GO:0006069 "ethanol oxidation" evidence=IEA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=IEA

GO:0006068 "ethanol catabolic process" evidence=IEA

GO:0007568 "aging" evidence=IEA

GO:0018119 "peptidyl-cysteine S-nitrosylation" evidence=IEA

GO:0032496 "response to lipopolysaccharide" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0045777 "positive regulation of blood pressure" evidence=IEA

GO:0046294 "formaldehyde catabolic process" evidence=IEA

GO:0051409 "response to nitrosative stress" evidence=IEA

GO:0001523 "retinoid metabolic process" evidence=IEA

GO:0003016 "respiratory system process" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0009055 "electron carrier activity" evidence=TAS

GO:0008270 "zinc ion binding" evidence=IDA

GO:0005504 "fatty acid binding" evidence=IDA

GO:0051775 "response to redox state" evidence=IDA

GO:0018467 "formaldehyde dehydrogenase activity" evidence=IDA

GO:0051903 "S-(hydroxymethyl)glutathione dehydrogenase activity" evidence=TAS

UNIPROTKB|Q3ZC42 ADH5 "Alcohol dehydrogenase class-3" [Bos taurus (taxid:9913)]

 Score = 554 (200.1 bits), Expect = 8.5e-75, Sum P(2) = 8.5e-75
 Identities = 104/246 (42%), Positives = 151/246 (61%)

Query:   107 RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 166
             RF+  G+ + H++GTSTFSEYTVV    VAKI+PLAPLDKVC+L CG+STG GA LN AK
Sbjct:   129 RFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAALNAAK 188

Query:   167 PERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNTSEHDR 226
              E                               VD +  +F  AK+FG ++ +N  +  +
Sbjct:   189 VEPGSTCAVFGLGGVGLAVIMGCKMAGAARIIGVDINKDKFARAKEFGASECINPQDFSK 248

Query:   227 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV 286
             PIQEV+ EMT+GGVD S EC GN+  M +A E  H GWG++V+VGV +      T+P  +
Sbjct:   249 PIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGISVVVGVAASGEEIATRPFQL 308

Query:   287 LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGL 346
             +  RT KGT FG +K    +P +V  YM+K++++++F+TH +PF +IN+AF+ M  G+ +
Sbjct:   309 VTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHSLPFDQINEAFDLMHAGKSI 368

Query:   347 RCIISM 352
             R ++ +
Sbjct:   369 RTVVKL 374

GO:0051775 "response to redox state" evidence=IEA

GO:0051409 "response to nitrosative stress" evidence=IEA

GO:0046294 "formaldehyde catabolic process" evidence=IEA

GO:0045777 "positive regulation of blood pressure" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0032496 "response to lipopolysaccharide" evidence=IEA

GO:0018467 "formaldehyde dehydrogenase activity" evidence=IEA

GO:0018119 "peptidyl-cysteine S-nitrosylation" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0005504 "fatty acid binding" evidence=IEA

GO:0003016 "respiratory system process" evidence=IEA

GO:0001523 "retinoid metabolic process" evidence=IEA

GO:0051903 "S-(hydroxymethyl)glutathione dehydrogenase activity" evidence=IEA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006069 "ethanol oxidation" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

RGD|2292706 Adh5 "alcohol dehydrogenase 5 (class III), chi polypeptide" [Rattus norvegicus (taxid:10116)]

 Score = 545 (196.9 bits), Expect = 1.1e-74, Sum P(2) = 1.1e-74
 Identities = 105/246 (42%), Positives = 148/246 (60%)

Query:   107 RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 166
             RF+  G+P+ HF+GTSTFSEYTVV    VAKI+P APLDKVC+L CG+STG GA +N AK
Sbjct:   129 RFTCKGKPILHFMGTSTFSEYTVVADISVAKIDPSAPLDKVCLLGCGISTGYGAAVNTAK 188

Query:   167 PERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNTSEHDR 226
              E                               +D +  +F +AK+FG T+ +N  +  +
Sbjct:   189 VEPGSTCAVFGLGGVGLAVIMGCKVAGASRIIGIDINKDKFAKAKEFGATECINPQDFSK 248

Query:   227 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV 286
              IQEV+ EMT+GGVD S EC GN+  M SA E  H GWGV+V+VGV +      T+P  +
Sbjct:   249 SIQEVLIEMTDGGVDFSFECIGNVKVMRSALEAAHKGWGVSVVVGVAASGEEISTRPFQL 308

Query:   287 LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGL 346
             +  RT KGT FG +K    +P +V  YM+K++++++F+T  + F +INKAF+ M  G  +
Sbjct:   309 VTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTGNLSFDQINKAFDLMHSGNSI 368

Query:   347 RCIISM 352
             R ++ M
Sbjct:   369 RTVLKM 374

GO:0000166 "nucleotide binding" evidence=IEA

GO:0001523 "retinoid metabolic process" evidence=IEA;ISO

GO:0003016 "respiratory system process" evidence=IEA;ISO

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=IEA;ISO;IDA

GO:0005504 "fatty acid binding" evidence=IEA;ISO

GO:0005634 "nucleus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0005739 "mitochondrion" evidence=IEA;ISO

GO:0006068 "ethanol catabolic process" evidence=IDA

GO:0006069 "ethanol oxidation" evidence=IEA

GO:0007568 "aging" evidence=IEP

GO:0008270 "zinc ion binding" evidence=IEA;ISO

GO:0018119 "peptidyl-cysteine S-nitrosylation" evidence=IEA;ISO

GO:0018467 "formaldehyde dehydrogenase activity" evidence=IEA;ISO

GO:0032496 "response to lipopolysaccharide" evidence=IEA;ISO

GO:0042803 "protein homodimerization activity" evidence=IEA;ISO

GO:0045777 "positive regulation of blood pressure" evidence=IEA;ISO

GO:0046294 "formaldehyde catabolic process" evidence=IEA;ISO

GO:0051409 "response to nitrosative stress" evidence=IEA;ISO

GO:0051775 "response to redox state" evidence=IEA;ISO

GO:0051903 "S-(hydroxymethyl)glutathione dehydrogenase activity" evidence=IEA;ISO

GO:0055114 "oxidation-reduction process" evidence=ISO

UNIPROTKB|P12711 Adh5 "Alcohol dehydrogenase class-3" [Rattus norvegicus (taxid:10116)]

 Score = 545 (196.9 bits), Expect = 1.1e-74, Sum P(2) = 1.1e-74
 Identities = 105/246 (42%), Positives = 148/246 (60%)

Query:   107 RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 166
             RF+  G+P+ HF+GTSTFSEYTVV    VAKI+P APLDKVC+L CG+STG GA +N AK
Sbjct:   129 RFTCKGKPILHFMGTSTFSEYTVVADISVAKIDPSAPLDKVCLLGCGISTGYGAAVNTAK 188

Query:   167 PERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNTSEHDR 226
              E                               +D +  +F +AK+FG T+ +N  +  +
Sbjct:   189 VEPGSTCAVFGLGGVGLAVIMGCKVAGASRIIGIDINKDKFAKAKEFGATECINPQDFSK 248

Query:   227 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV 286
              IQEV+ EMT+GGVD S EC GN+  M SA E  H GWGV+V+VGV +      T+P  +
Sbjct:   249 SIQEVLIEMTDGGVDFSFECIGNVKVMRSALEAAHKGWGVSVVVGVAASGEEISTRPFQL 308

Query:   287 LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGL 346
             +  RT KGT FG +K    +P +V  YM+K++++++F+T  + F +INKAF+ M  G  +
Sbjct:   309 VTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTGNLSFDQINKAFDLMHSGNSI 368

Query:   347 RCIISM 352
             R ++ M
Sbjct:   369 RTVLKM 374

GO:0000166 "nucleotide binding" evidence=IEA

GO:0001523 "retinoid metabolic process" evidence=IEA

GO:0003016 "respiratory system process" evidence=IEA

GO:0005504 "fatty acid binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0006069 "ethanol oxidation" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0018119 "peptidyl-cysteine S-nitrosylation" evidence=IEA

GO:0018467 "formaldehyde dehydrogenase activity" evidence=IEA

GO:0032496 "response to lipopolysaccharide" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0045777 "positive regulation of blood pressure" evidence=IEA

GO:0046294 "formaldehyde catabolic process" evidence=IEA

GO:0051409 "response to nitrosative stress" evidence=IEA

GO:0051775 "response to redox state" evidence=IEA

UNIPROTKB|F1NI89 ADH5 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 537 (194.1 bits), Expect = 4.7e-74, Sum P(2) = 4.7e-74
 Identities = 100/244 (40%), Positives = 149/244 (61%)

Query:   107 RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 166
             RF+  G+ + HF+GTSTFSEYTVV    VAKI+P AP DKVC+L CG+STG GA +N AK
Sbjct:   125 RFTCKGKQIYHFMGTSTFSEYTVVADISVAKIDPAAPFDKVCLLGCGISTGYGAAVNTAK 184

Query:   167 PERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNTSEHDR 226
              E                               +D +   + +AK+FG  + ++  + ++
Sbjct:   185 VEPGSTCAVFGLGGVGLATVMGCKAAGASRIIGIDINKNTYAKAKEFGAAECISPQDFEK 244

Query:   227 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV 286
             PIQEV+ EMT+GGVD S EC GN+  M +A E  H GWGV+V+VGV +      T+P  +
Sbjct:   245 PIQEVLVEMTDGGVDYSFECIGNVGVMRAALEACHKGWGVSVIVGVAAAGQEISTRPFQL 304

Query:   287 LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGL 346
             +  RT KGT FG +K    +P +V+ YM K++++++F+TH +PF +IN+AF+ + KG+ +
Sbjct:   305 VTGRTWKGTAFGGWKSVDSVPKLVNDYMAKKIKVDEFVTHTLPFDKINEAFDLLHKGKSI 364

Query:   347 RCII 350
             R ++
Sbjct:   365 RTVL 368

GO:0000166 "nucleotide binding" evidence=IEA

GO:0006069 "ethanol oxidation" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0051903 "S-(hydroxymethyl)glutathione dehydrogenase activity" evidence=IEA

UNIPROTKB|F1NKS5 ADH5 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 537 (194.1 bits), Expect = 4.7e-74, Sum P(2) = 4.7e-74
 Identities = 100/244 (40%), Positives = 149/244 (61%)

Query:   107 RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 166
             RF+  G+ + HF+GTSTFSEYTVV    VAKI+P AP DKVC+L CG+STG GA +N AK
Sbjct:   129 RFTCKGKQIYHFMGTSTFSEYTVVADISVAKIDPAAPFDKVCLLGCGISTGYGAAVNTAK 188

Query:   167 PERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNTSEHDR 226
              E                               +D +   + +AK+FG  + ++  + ++
Sbjct:   189 VEPGSTCAVFGLGGVGLATVMGCKAAGASRIIGIDINKNTYAKAKEFGAAECISPQDFEK 248

Query:   227 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV 286
             PIQEV+ EMT+GGVD S EC GN+  M +A E  H GWGV+V+VGV +      T+P  +
Sbjct:   249 PIQEVLVEMTDGGVDYSFECIGNVGVMRAALEACHKGWGVSVIVGVAAAGQEISTRPFQL 308

Query:   287 LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGL 346
             +  RT KGT FG +K    +P +V+ YM K++++++F+TH +PF +IN+AF+ + KG+ +
Sbjct:   309 VTGRTWKGTAFGGWKSVDSVPKLVNDYMAKKIKVDEFVTHTLPFDKINEAFDLLHKGKSI 368

Query:   347 RCII 350
             R ++
Sbjct:   369 RTVL 372

GO:0000166 "nucleotide binding" evidence=IEA

GO:0006069 "ethanol oxidation" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0001523 "retinoid metabolic process" evidence=IEA

GO:0003016 "respiratory system process" evidence=IEA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=IEA

GO:0005504 "fatty acid binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0018119 "peptidyl-cysteine S-nitrosylation" evidence=IEA

GO:0018467 "formaldehyde dehydrogenase activity" evidence=IEA

GO:0032496 "response to lipopolysaccharide" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0045777 "positive regulation of blood pressure" evidence=IEA

GO:0046294 "formaldehyde catabolic process" evidence=IEA

GO:0051409 "response to nitrosative stress" evidence=IEA

GO:0051775 "response to redox state" evidence=IEA

GO:0051903 "S-(hydroxymethyl)glutathione dehydrogenase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q2R8Z5	ADH1_ORYSJ	1, ., 1, ., 1, ., 1	0.7275	0.9943	0.9287	yes	no
P06525	ADH1_ARATH	1, ., 1, ., 1, ., 1	0.7446	0.9887	0.9234	yes	no
P19854	ADHX_HORSE	1, ., 1, ., 1, ., 2, 8, 4	0.4891	0.9745	0.9224	yes	no
P14674	ADH2_SOLTU	1, ., 1, ., 1, ., 1	0.7447	1.0	0.9315	N/A	no
P14675	ADH3_SOLTU	1, ., 1, ., 1, ., 1	0.7447	1.0	0.9315	N/A	no
A2XAZ3	ADHX_ORYSI	1, ., 1, ., 1, ., 2, 8, 4	0.5423	0.9943	0.9238	N/A	no
P14673	ADH1_SOLTU	1, ., 1, ., 1, ., 1	0.7447	1.0	0.9315	N/A	no
P12711	ADHX_RAT	1, ., 1, ., 1, ., 2, 8, 4	0.4932	0.9830	0.9304	yes	no
P28032	ADH2_SOLLC	1, ., 1, ., 1, ., 1	0.7394	1.0	0.9315	N/A	no
P93629	ADHX_MAIZE	1, ., 1, ., 1, ., 2, 8, 4	0.5343	0.9943	0.9238	N/A	no
P48977	ADH_MALDO	1, ., 1, ., 1, ., 1	0.7447	1.0	0.9315	N/A	no
P00333	ADH1_MAIZE	1, ., 1, ., 1, ., 1	0.7275	0.9943	0.9287	N/A	no
P00327	ADH1E_HORSE	1, ., 1, ., 1, ., 1	0.464	0.9858	0.9306	yes	no
P80572	ADHX_PEA	1, ., 1, ., 1, ., 2, 8, 4	0.5264	0.9943	0.9312	N/A	no
Q4R1E8	ADH2_ORYSI	1, ., 1, ., 1, ., 1	0.6904	0.9943	0.9287	N/A	no
Q17335	ADHX_CAEEL	1, ., 1, ., 1, ., 2, 8, 4	0.4554	0.9971	0.9192	yes	no
Q3ZC42	ADHX_BOVIN	1, ., 1, ., 1, ., 2, 8, 4	0.4852	0.9830	0.9304	yes	no
P46415	ADHX_DROME	1, ., 1, ., 1, ., 2, 8, 4	0.4694	0.9887	0.9234	yes	no
P11766	ADHX_HUMAN	1, ., 1, ., 1, ., 2, 8, 4	0.4959	0.9830	0.9304	yes	no
P25141	ADH1_PETHY	1, ., 1, ., 1, ., 1	0.7282	0.9943	0.9214	N/A	no
P05336	ADH1_HORVU	1, ., 1, ., 1, ., 1	0.7089	0.9943	0.9287	N/A	no
P12886	ADH1_PEA	1, ., 1, ., 1, ., 1	0.7368	1.0	0.9315	N/A	no
P13603	ADH1_TRIRP	1, ., 1, ., 1, ., 1	0.7289	1.0	0.9315	N/A	no
P17648	ADH_FRAAN	1, ., 1, ., 1, ., 1	0.7263	1.0	0.9315	N/A	no
P04707	ADH2_MAIZE	1, ., 1, ., 1, ., 1	0.7063	0.9943	0.9287	N/A	no
P14219	ADH1_PENAM	1, ., 1, ., 1, ., 1	0.7275	0.9943	0.9287	N/A	no
P28474	ADHX_MOUSE	1, ., 1, ., 1, ., 2, 8, 4	0.4825	0.9830	0.9304	yes	no
Q54TC2	ADHX_DICDI	1, ., 1, ., 1, ., 2, 8, 4	0.4603	0.9887	0.9234	yes	no
Q75ZX4	ADH1_ORYSI	1, ., 1, ., 1, ., 1	0.7275	0.9943	0.9287	N/A	no
P10847	ADH2_HORVU	1, ., 1, ., 1, ., 1	0.6719	0.9774	0.9276	N/A	no
Q07264	ADH1_ZEALU	1, ., 1, ., 1, ., 1	0.7157	0.7514	0.9078	N/A	no
P10848	ADH3_HORVU	1, ., 1, ., 1, ., 1	0.7131	0.9802	0.9155	N/A	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.1.1	0.983
4th Layer	1.1.1.1	0.979

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	354
cd08301	369	cd08301, alcohol_DH_plants, Plant alcohol dehydrog	0.0
cd08277	365	cd08277, liver_alcohol_DH_like, Liver alcohol dehy	0.0
cd08300	368	cd08300, alcohol_DH_class_III, class III alcohol d	1e-177
PLN02740	381	PLN02740, PLN02740, Alcohol dehydrogenase-like	1e-160
PLN02827	378	PLN02827, PLN02827, Alcohol dehydrogenase-like	1e-159
cd08299	373	cd08299, alcohol_DH_class_I_II_IV, class I, II, IV	1e-151
COG1062	366	COG1062, AdhC, Zn-dependent alcohol dehydrogenases	1e-148
TIGR02818	368	TIGR02818, adh_III_F_hyde, S-(hydroxymethyl)glutat	1e-141
cd05279	365	cd05279, Zn_ADH1, Liver alcohol dehydrogenase and	1e-140
cd08279	363	cd08279, Zn_ADH_class_III, Class III alcohol dehyd	1e-121
cd08278	365	cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydro	5e-97
cd08281	371	cd08281, liver_ADH_like1, Zinc-dependent alcohol d	1e-93
TIGR03989	369	TIGR03989, Rxyl_3153, oxidoreductase, Rxyl_3153 fa	2e-80
TIGR03451	358	TIGR03451, mycoS_dep_FDH, S-(hydroxymethyl)mycothi	2e-77
cd08263	367	cd08263, Zn_ADH10, Alcohol dehydrogenases of the M	1e-66
cd05188	271	cd05188, MDR, Medium chain reductase/dehydrogenase	6e-63
COG1063	350	COG1063, Tdh, Threonine dehydrogenase and related	8e-60
COG1064	339	COG1064, AdhP, Zn-dependent alcohol dehydrogenases	3e-57
cd08236	343	cd08236, sugar_DH, NAD(P)-dependent sugar dehydrog	1e-55
cd08234	334	cd08234, threonine_DH_like, L-threonine dehydrogen	3e-54
cd08233	351	cd08233, butanediol_DH_like, (2R,3R)-2,3-butanedio	3e-52
cd08261	337	cd08261, Zn_ADH7, Alcohol dehydrogenases of the MD	3e-51
cd05285	343	cd05285, sorbitol_DH, Sorbitol dehydrogenase	2e-50
cd08235	343	cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenas	8e-50
cd05278	347	cd05278, FDH_like, Formaldehyde dehydrogenases	2e-47
cd08260	345	cd08260, Zn_ADH6, Alcohol dehydrogenases of the MD	3e-47
cd08239	339	cd08239, THR_DH_like, L-threonine dehydrogenase (T	1e-46
cd08231	361	cd08231, MDR_TM0436_like, Hypothetical enzyme TM04	9e-46
cd08254	338	cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-e	1e-45
cd05281	341	cd05281, TDH, Threonine dehydrogenase	1e-43
cd08297	341	cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CA	2e-42
cd08245	330	cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD	1e-41
cd08284	344	cd08284, FDH_like_2, Glutathione-dependent formald	2e-40
cd05284	340	cd05284, arabinose_DH_like, D-arabinose dehydrogen	5e-40
cd08285	351	cd08285, NADP_ADH, NADP(H)-dependent alcohol dehyd	7e-40
cd08240	350	cd08240, 6_hydroxyhexanoate_dh_like, 6-hydroxyhexa	4e-38
cd08283	386	cd08283, FDH_like_1, Glutathione-dependent formald	4e-37
cd08286	345	cd08286, FDH_like_ADH2, formaldehyde dehydrogenase	2e-36
cd08259	332	cd08259, Zn_ADH5, Alcohol dehydrogenases of the MD	4e-36
PRK05396	341	PRK05396, tdh, L-threonine 3-dehydrogenase; Valida	1e-35
cd08258	306	cd08258, Zn_ADH4, Alcohol dehydrogenases of the MD	5e-34
TIGR00692	340	TIGR00692, tdh, L-threonine 3-dehydrogenase	5e-34
cd08287	345	cd08287, FDH_like_ADH3, formaldehyde dehydrogenase	5e-33
cd08269	312	cd08269, Zn_ADH9, Alcohol dehydrogenases of the MD	1e-32
cd08232	339	cd08232, idonate-5-DH, L-idonate 5-dehydrogenase	2e-31
COG0604	326	COG0604, Qor, NADPH:quinone reductase and related	1e-30
cd08282	375	cd08282, PFDH_like, Pseudomonas putida aldehyde-di	1e-30
cd08265	384	cd08265, Zn_ADH3, Alcohol dehydrogenases of the MD	3e-30
cd08298	329	cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CA	4e-27
cd05283	337	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CA	5e-27
pfam00107	131	pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase	5e-27
pfam08240	108	pfam08240, ADH_N, Alcohol dehydrogenase GroES-like	1e-26
cd08255	277	cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochloro	5e-26
cd08296	333	cd08296, CAD_like, Cinnamyl alcohol dehydrogenases	6e-26
cd05289	309	cd05289, MDR_like_2, alcohol dehydrogenase and qui	5e-25
cd08249	339	cd08249, enoyl_reductase_like, enoyl_reductase_lik	2e-24
cd08268	328	cd08268, MDR2, Medium chain dehydrogenases/reducta	4e-24
PLN02702	364	PLN02702, PLN02702, L-idonate 5-dehydrogenase	4e-24
cd08266	342	cd08266, Zn_ADH_like1, Alcohol dehydrogenases of t	2e-23
PRK13771	334	PRK13771, PRK13771, putative alcohol dehydrogenase	3e-23
PRK10083	339	PRK10083, PRK10083, putative oxidoreductase; Provi	2e-22
cd08276	336	cd08276, MDR7, Medium chain dehydrogenases/reducta	2e-21
TIGR03366	280	TIGR03366, HpnZ_proposed, putative phosphonate cat	8e-21
PRK10309	347	PRK10309, PRK10309, galactitol-1-phosphate dehydro	8e-20
cd08256	350	cd08256, Zn_ADH2, Alcohol dehydrogenases of the MD	1e-19
cd08253	325	cd08253, zeta_crystallin, Zeta-crystallin with NAD	1e-19
cd08267	319	cd08267, MDR1, Medium chain dehydrogenases/reducta	2e-19
cd08241	323	cd08241, QOR1, Quinone oxidoreductase (QOR)	4e-19
PRK09422	338	PRK09422, PRK09422, ethanol-active dehydrogenase/a	5e-19
TIGR03201	349	TIGR03201, dearomat_had, 6-hydroxycyclohex-1-ene-1	1e-18
cd08271	325	cd08271, MDR5, Medium chain dehydrogenases/reducta	2e-17
cd05286	320	cd05286, QOR2, Quinone oxidoreductase (QOR)	7e-17
cd08262	341	cd08262, Zn_ADH8, Alcohol dehydrogenases of the MD	2e-16
cd08230	355	cd08230, glucose_DH, Glucose dehydrogenase	1e-14
cd08242	319	cd08242, MDR_like, Medium chain dehydrogenases/red	5e-14
cd08273	331	cd08273, MDR8, Medium chain dehydrogenases/reducta	8e-14
cd08243	320	cd08243, quinone_oxidoreductase_like_1, Quinone ox	1e-13
cd05195	293	cd05195, enoyl_red, enoyl reductase of polyketide	5e-13
cd08272	326	cd08272, MDR6, Medium chain dehydrogenases/reducta	9e-13
PLN02514	357	PLN02514, PLN02514, cinnamyl-alcohol dehydrogenase	1e-12
cd08264	325	cd08264, Zn_ADH_like2, Alcohol dehydrogenases of t	1e-12
TIGR02819	393	TIGR02819, fdhA_non_GSH, formaldehyde dehydrogenas	1e-12
PTZ00354	334	PTZ00354, PTZ00354, alcohol dehydrogenase; Provisi	2e-12
cd05276	323	cd05276, p53_inducible_oxidoreductase, PIG3 p53-in	3e-11
cd08251	303	cd08251, polyketide_synthase, polyketide synthase	6e-11
PLN02586	360	PLN02586, PLN02586, probable cinnamyl alcohol dehy	4e-10
PLN02178	375	PLN02178, PLN02178, cinnamyl-alcohol dehydrogenase	9e-10
cd05282	323	cd05282, ETR_like, 2-enoyl thioester reductase-lik	1e-09
cd08290	341	cd08290, ETR, 2-enoyl thioester reductase (ETR)	3e-09
TIGR02822	329	TIGR02822, adh_fam_2, zinc-binding alcohol dehydro	5e-09
PRK10754	327	PRK10754, PRK10754, quinone oxidoreductase, NADPH-	6e-09
cd08292	324	cd08292, ETR_like_2, 2-enoyl thioester reductase (	1e-08
cd08250	329	cd08250, Mgc45594_like, Mgc45594 gene product and	1e-08
cd08275	337	cd08275, MDR3, Medium chain dehydrogenases/reducta	1e-08
cd08274	350	cd08274, MDR9, Medium chain dehydrogenases/reducta	5e-08
smart00829	287	smart00829, PKS_ER, Enoylreductase	6e-08
PRK09880	343	PRK09880, PRK09880, L-idonate 5-dehydrogenase; Pro	1e-07
cd08248	350	cd08248, RTN4I1, Human Reticulon 4 Interacting Pro	1e-06
cd08247	352	cd08247, AST1_like, AST1 is a cytoplasmic protein	2e-06
cd08252	336	cd08252, AL_MDR, Arginate lyase and other MDR fami	2e-06
TIGR02824	325	TIGR02824, quinone_pig3, putative NAD(P)H quinone	1e-05
cd08244	324	cd08244, MDR_enoyl_red, Possible enoyl reductase	1e-04
cd08291	324	cd08291, ETR_like_1, 2-enoyl thioester reductase (	4e-04
COG2130	340	COG2130, COG2130, Putative NADP-dependent oxidored	7e-04
cd08246	393	cd08246, crotonyl_coA_red, crotonyl-CoA reductase	0.001
cd05288	329	cd05288, PGDH, Prostaglandin dehydrogenases	0.001
TIGR01202	308	TIGR01202, bchC, 2-desacetyl-2-hydroxyethyl bacter	0.001
cd08270	305	cd08270, MDR4, Medium chain dehydrogenases/reducta	0.001
TIGR01751	398	TIGR01751, crot-CoA-red, crotonyl-CoA reductase	0.004

>gnl|CDD|176261 cd08301, alcohol_DH_plants, Plant alcohol dehydrogenase

 Score =  669 bits (1727), Expect = 0.0
 Identities = 269/368 (73%), Positives = 308/368 (83%), Gaps = 26/368 (7%)

Query: 9   LTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIF 68
           +TCKAAVAWEAGKPL+I++VEVAPPQAMEVRIKI +TSLC TD+YFWE+KGQTPLFPRI 
Sbjct: 1   ITCKAAVAWEAGKPLVIEEVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKGQTPLFPRIL 60

Query: 69  GHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHC---------------------- 106
           GHEAAG+VESVGEGV+DL+ GDHVLPVFTGEC +CRHC                      
Sbjct: 61  GHEAAGIVESVGEGVTDLKPGDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMIN 120

Query: 107 ----RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATL 162
               RFSING+P+ HF+GTSTFSEYTVVH GCVAKINP APLDKVC+LSCGVSTGLGA  
Sbjct: 121 DGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPEAPLDKVCLLSCGVSTGLGAAW 180

Query: 163 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS 222
           NVAK ++GS+VA+FGLGAVGLA AEGARI GASRIIGVD +  +FE+AKKFGVT+FVN  
Sbjct: 181 NVAKVKKGSTVAIFGLGAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKKFGVTEFVNPK 240

Query: 223 EHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTK 282
           +HD+P+QEVIAEMT GGVD S ECTGNID MISAFECVHDGWGV VL+GVP KDAVF T 
Sbjct: 241 DHDKPVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDAVFSTH 300

Query: 283 PINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVK 342
           P+N+LN RTLKGT FG YKP+TDLP++V+ YM K+LELEKFITH +PFSEINKAF+ ++K
Sbjct: 301 PMNLLNGRTLKGTLFGGYKPKTDLPNLVEKYMKKELELEKFITHELPFSEINKAFDLLLK 360

Query: 343 GEGLRCII 350
           GE LRCI+
Sbjct: 361 GECLRCIL 368

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 369

>gnl|CDD|176238 cd08277, liver_alcohol_DH_like, Liver alcohol dehydrogenase

 Score =  515 bits (1329), Expect = 0.0
 Identities = 198/367 (53%), Positives = 254/367 (69%), Gaps = 26/367 (7%)

Query: 9   LTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIF 68
           + CKAAVAWEAGKPL+I+++EVAPP+A EVRIK+  TS+C TD+   E    T  FP I 
Sbjct: 1   IKCKAAVAWEAGKPLVIEEIEVAPPKANEVRIKMLATSVCHTDILAIEGFKATL-FPVIL 59

Query: 69  GHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHC---------------------- 106
           GHE AG+VESVGEGV++L+ GD V+P+F G+CG+C +C                      
Sbjct: 60  GHEGAGIVESVGEGVTNLKPGDKVIPLFIGQCGECSNCRSGKTNLCQKYRANESGLMPDG 119

Query: 107 --RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNV 164
             RF+  G+ + HFLGTSTFS+YTVV    VAKI+P APL+ VC+L CG STG GA  N 
Sbjct: 120 TSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDPAAPLEHVCLLGCGFSTGYGAAWNT 179

Query: 165 AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEH 224
           AK E GS+VAVFGLGAVGL+A  GA+IAGASRIIGVD +  +FE+AK+FG TDF+N  + 
Sbjct: 180 AKVEPGSTVAVFGLGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKEFGATDFINPKDS 239

Query: 225 DRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI 284
           D+P+ EVI EMT GGVD S ECTGN D M  A E    GWGV+V+VGVP    +   +P 
Sbjct: 240 DKPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPGAEL-SIRPF 298

Query: 285 NVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGE 344
            ++  RT KG+FFG +K R+D+P +V  YMNK+ +L++ ITH +PF EINK F+ M  GE
Sbjct: 299 QLILGRTWKGSFFGGFKSRSDVPKLVSKYMNKKFDLDELITHVLPFEEINKGFDLMKSGE 358

Query: 345 GLRCIIS 351
            +R +I+
Sbjct: 359 CIRTVIT 365

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365

>gnl|CDD|176260 cd08300, alcohol_DH_class_III, class III alcohol dehydrogenases

 Score =  496 bits (1279), Expect = e-177
 Identities = 195/367 (53%), Positives = 253/367 (68%), Gaps = 25/367 (6%)

Query: 9   LTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIF 68
           +TCKAAVAWEAGKPL I++VEVAPP+A EVRIKI  T +C TD Y         LFP I 
Sbjct: 1   ITCKAAVAWEAGKPLSIEEVEVAPPKAGEVRIKILATGVCHTDAYTLSGADPEGLFPVIL 60

Query: 69  GHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHC---------------------- 106
           GHE AG+VESVGEGV+ ++ GDHV+P++T ECG+C+ C                      
Sbjct: 61  GHEGAGIVESVGEGVTSVKPGDHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLMPD 120

Query: 107 ---RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLN 163
              RFS  G+P+ HF+GTSTFSEYTVV    VAKINP APLDKVC+L CGV+TG GA LN
Sbjct: 121 GTSRFSCKGKPIYHFMGTSTFSEYTVVAEISVAKINPEAPLDKVCLLGCGVTTGYGAVLN 180

Query: 164 VAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE 223
            AK E GS+VAVFGLGAVGLA  +GA+ AGASRIIG+D +  +FE AKKFG TD VN  +
Sbjct: 181 TAKVEPGSTVAVFGLGAVGLAVIQGAKAAGASRIIGIDINPDKFELAKKFGATDCVNPKD 240

Query: 224 HDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP 283
           HD+PIQ+V+ EMT+GGVD + EC GN+  M +A E  H GWG +V++GV +      T+P
Sbjct: 241 HDKPIQQVLVEMTDGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQEISTRP 300

Query: 284 INVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKG 343
             ++  R  KGT FG +K R+ +P +V+ YM  ++++++FITH +P  EIN+AF+ M  G
Sbjct: 301 FQLVTGRVWKGTAFGGWKSRSQVPKLVEDYMKGKIKVDEFITHTMPLDEINEAFDLMHAG 360

Query: 344 EGLRCII 350
           + +R ++
Sbjct: 361 KSIRTVV 367

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 368

>gnl|CDD|178341 PLN02740, PLN02740, Alcohol dehydrogenase-like

 Score =  452 bits (1164), Expect = e-160
 Identities = 191/381 (50%), Positives = 258/381 (67%), Gaps = 33/381 (8%)

Query: 1   MSSTAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ 60
            S T G ++TCKAAVAW  G+PL+++++ V PPQ MEVRIKI YTS+C TDL  W  KG+
Sbjct: 1   ASETQGKVITCKAAVAWGPGEPLVMEEIRVDPPQKMEVRIKILYTSICHTDLSAW--KGE 58

Query: 61  TPL---FPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHC----------- 106
                 +PRI GHEAAG+VESVGEGV DL+ GDHV+P+F GECGDCR+C           
Sbjct: 59  NEAQRAYPRILGHEAAGIVESVGEGVEDLKAGDHVIPIFNGECGDCRYCKRDKTNLCETY 118

Query: 107 ---------------RFSI--NGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCI 149
                          RFS   +G+P+ HFL TSTF+EYTV+ S CV KI+P APL K+ +
Sbjct: 119 RVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDSACVVKIDPNAPLKKMSL 178

Query: 150 LSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEE 209
           LSCGVSTG+GA  N A  + GSSVA+FGLGAVGLA AEGAR  GAS+IIGVD + ++FE+
Sbjct: 179 LSCGVSTGVGAAWNTANVQAGSSVAIFGLGAVGLAVAEGARARGASKIIGVDINPEKFEK 238

Query: 210 AKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVL 269
            K+ G+TDF+N  + D+P+ E I EMT GGVD S EC GN++ +  AF   HDGWG+ VL
Sbjct: 239 GKEMGITDFINPKDSDKPVHERIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVL 298

Query: 270 VGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIP 329
           +G+     +    P+ + + R++ G+ FG++K ++ LP++    M   + L+ FITH +P
Sbjct: 299 LGIHPTPKMLPLHPMELFDGRSITGSVFGDFKGKSQLPNLAKQCMQGVVNLDGFITHELP 358

Query: 330 FSEINKAFEYMVKGEGLRCII 350
           F +IN+AF+ +  G+ LRC++
Sbjct: 359 FEKINEAFQLLEDGKALRCLL 379

Length = 381

>gnl|CDD|215442 PLN02827, PLN02827, Alcohol dehydrogenase-like

 Score =  450 bits (1159), Expect = e-159
 Identities = 199/370 (53%), Positives = 261/370 (70%), Gaps = 28/370 (7%)

Query: 8   ILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRI 67
           ++TC+AAVAW AG+ L++++VEV+PPQ +E+RIK+  TSLCR+DL  WES+    LFPRI
Sbjct: 10  VITCRAAVAWGAGEALVMEEVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQ---ALFPRI 66

Query: 68  FGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHC--------------------- 106
           FGHEA+G+VES+GEGV++ E GDHVL VFTGECG CRHC                     
Sbjct: 67  FGHEASGIVESIGEGVTEFEKGDHVLTVFTGECGSCRHCISGKSNMCQVLGLERKGVMHS 126

Query: 107 ----RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATL 162
               RFSI G+PV H+   S+FSEYTVVHSGC  K++PLAPL K+C+LSCGV+ GLGA  
Sbjct: 127 DQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPLAPLHKICLLSCGVAAGLGAAW 186

Query: 163 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS 222
           NVA   +GSSV +FGLG VGL+ A+GA++ GAS+IIGVD + ++ E+AK FGVTDF+N +
Sbjct: 187 NVADVSKGSSVVIFGLGTVGLSVAQGAKLRGASQIIGVDINPEKAEKAKTFGVTDFINPN 246

Query: 223 EHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTK 282
           +   PIQ+VI  MT GG D S EC G+     +A +   DGWG+ V +GVP         
Sbjct: 247 DLSEPIQQVIKRMTGGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAKPEVSAH 306

Query: 283 PINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVK 342
               L+ RTLKG+ FG +KP++DLPS+VD YMNK++ +++FITH + F EINKAFE M +
Sbjct: 307 YGLFLSGRTLKGSLFGGWKPKSDLPSLVDKYMNKEIMIDEFITHNLSFDEINKAFELMRE 366

Query: 343 GEGLRCIISM 352
           G+ LRC+I M
Sbjct: 367 GKCLRCVIHM 376

Length = 378

>gnl|CDD|176259 cd08299, alcohol_DH_class_I_II_IV, class I, II, IV alcohol dehydrogenases

 Score =  431 bits (1110), Expect = e-151
 Identities = 177/374 (47%), Positives = 240/374 (64%), Gaps = 26/374 (6%)

Query: 4   TAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL 63
           TAG ++ CKAAV WE  KP  I+++EVAPP+A EVRIKI  T +CR+D +    K  TP 
Sbjct: 1   TAGKVIKCKAAVLWEPKKPFSIEEIEVAPPKAHEVRIKIVATGICRSDDHVVSGKLVTP- 59

Query: 64  FPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHC----------------- 106
           FP I GHEAAG+VESVGEGV+ ++ GD V+P+F  +CG CR C                 
Sbjct: 60  FPVILGHEAAGIVESVGEGVTTVKPGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQ 119

Query: 107 --------RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGL 158
                   RF+  G+P++HFLGTSTFSEYTVV    VAKI+  APL+KVC++ CG STG 
Sbjct: 120 GLMQDGTSRFTCKGKPIHHFLGTSTFSEYTVVDEIAVAKIDAAAPLEKVCLIGCGFSTGY 179

Query: 159 GATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF 218
           GA +N AK   GS+ AVFGLG VGL+A  G + AGASRII VD +  +F +AK+ G T+ 
Sbjct: 180 GAAVNTAKVTPGSTCAVFGLGGVGLSAIMGCKAAGASRIIAVDINKDKFAKAKELGATEC 239

Query: 219 VNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAV 278
           +N  ++ +PIQEV+ EMT+GGVD S E  G +D M +A    H+G+GV+V+VGVP     
Sbjct: 240 INPQDYKKPIQEVLTEMTDGGVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPSSQN 299

Query: 279 FMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFE 338
               P+ +L  RT KG  FG +K +  +P +V  YM K+  L+  ITH +PF +IN+ F+
Sbjct: 300 LSINPMLLLTGRTWKGAVFGGWKSKDSVPKLVADYMAKKFNLDPLITHTLPFEKINEGFD 359

Query: 339 YMVKGEGLRCIISM 352
            +  G+ +R +++ 
Sbjct: 360 LLRSGKSIRTVLTF 373

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 373

>gnl|CDD|223990 COG1062, AdhC, Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

 Score =  423 bits (1090), Expect = e-148
 Identities = 168/369 (45%), Positives = 232/369 (62%), Gaps = 28/369 (7%)

Query: 9   LTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIF 68
           +  +AAVA EAGKPL I++V++ PP+A EV ++I  T +C TD +          FP + 
Sbjct: 1   MKTRAAVAREAGKPLEIEEVDLDPPRAGEVLVRITATGVCHTDAHTLSGDDPEG-FPAVL 59

Query: 69  GHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHC---------------------- 106
           GHE AG+VE+VGEGV+ ++ GDHV+ +FT ECG C+ C                      
Sbjct: 60  GHEGAGIVEAVGEGVTSVKPGDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPD 119

Query: 107 ---RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLN 163
              R S NG PV H+LG STF+EYTVVH   + KI+P APL+K C+L CGV+TG+GA +N
Sbjct: 120 GTTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVKIDPDAPLEKACLLGCGVTTGIGAVVN 179

Query: 164 VAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE 223
            AK E G +VAVFGLG VGLAA +GA+ AGA RII VD + ++ E AKKFG T FVN  E
Sbjct: 180 TAKVEPGDTVAVFGLGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKKFGATHFVNPKE 239

Query: 224 HDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP 283
            D  + E I E+T+GG D + EC GN++ M  A E  H   G +V++GV        T+P
Sbjct: 240 VD-DVVEAIVELTDGGADYAFECVGNVEVMRQALEATHR-GGTSVIIGVAGAGQEISTRP 297

Query: 284 INVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKG 343
             ++  R  KG+ FG  +PR+D+P +VD+YM  +L L++ +TH IP  +IN+AF+ M +G
Sbjct: 298 FQLVTGRVWKGSAFGGARPRSDIPRLVDLYMAGKLPLDRLVTHTIPLEDINEAFDLMHEG 357

Query: 344 EGLRCIISM 352
           + +R +I  
Sbjct: 358 KSIRSVIRF 366

Length = 366

>gnl|CDD|131865 TIGR02818, adh_III_F_hyde, S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

 Score =  403 bits (1038), Expect = e-141
 Identities = 172/366 (46%), Positives = 244/366 (66%), Gaps = 25/366 (6%)

Query: 12  KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHE 71
           +AAVAW AG+PL I++V+V  PQ  EV ++I  T +C TD +         +FP I GHE
Sbjct: 3   RAAVAWAAGQPLKIEEVDVEMPQKGEVLVRIVATGVCHTDAFTLSGADPEGVFPVILGHE 62

Query: 72  AAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHC------------------------- 106
            AG+VE+VGEGV+ ++VGDHV+P++T ECG+C+ C                         
Sbjct: 63  GAGIVEAVGEGVTSVKVGDHVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLMPDGTS 122

Query: 107 RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 166
           RFS +G+P+ H++G STFSEYTVV    +AKINP APL++VC+L CGV+TG+GA LN AK
Sbjct: 123 RFSKDGQPIYHYMGCSTFSEYTVVPEISLAKINPAAPLEEVCLLGCGVTTGIGAVLNTAK 182

Query: 167 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDR 226
            E G +VAVFGLG +GL+  +GAR+A ASRII +D +  +FE AKK G TD VN +++D+
Sbjct: 183 VEEGDTVAVFGLGGIGLSVIQGARMAKASRIIAIDINPAKFELAKKLGATDCVNPNDYDK 242

Query: 227 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV 286
           PIQEVI E+T+GGVD S EC GN++ M +A EC H GWG ++++GV        T+P  +
Sbjct: 243 PIQEVIVEITDGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQEISTRPFQL 302

Query: 287 LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGL 346
           +  R  +G+ FG  K RT+LP +V+ YM  ++ L+ F+TH +P  +IN+AF+ M +G+ +
Sbjct: 303 VTGRVWRGSAFGGVKGRTELPGIVEQYMKGEIALDDFVTHTMPLEDINEAFDLMHEGKSI 362

Query: 347 RCIISM 352
           R +I  
Sbjct: 363 RTVIHY 368

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols [Cellular processes, Detoxification, Energy metabolism, Fermentation]. Length = 368

>gnl|CDD|176182 cd05279, Zn_ADH1, Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases

 Score =  401 bits (1032), Expect = e-140
 Identities = 171/365 (46%), Positives = 232/365 (63%), Gaps = 26/365 (7%)

Query: 11  CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGH 70
           CKAAV WE GKPL I+++EVAPP+A EVRIK+  T +C TDL+  + K  TP  P I GH
Sbjct: 1   CKAAVLWEKGKPLSIEEIEVAPPKAGEVRIKVVATGVCHTDLHVIDGKLPTP-LPVILGH 59

Query: 71  EAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHC------------------------ 106
           E AG+VES+G GV+ L+ GD V+P+F  +CG C+ C                        
Sbjct: 60  EGAGIVESIGPGVTTLKPGDKVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGT 119

Query: 107 -RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVA 165
            RF+  G+P++HFLGTSTF+EYTVV    +AKI+P APL+KVC++ CG STG GA +N A
Sbjct: 120 SRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKIDPDAPLEKVCLIGCGFSTGYGAAVNTA 179

Query: 166 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHD 225
           K   GS+ AVFGLG VGL+   G + AGASRII VD +  +FE+AK+ G T+ +N  + D
Sbjct: 180 KVTPGSTCAVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQLGATECINPRDQD 239

Query: 226 RPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN 285
           +PI EV+ EMT+GGVD + E  G+ D +  A +    G G +V+VGVP         P +
Sbjct: 240 KPIVEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPPSGTEATLDPND 299

Query: 286 VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG 345
           +L  RT+KGT FG +K +  +P +V +Y  K+  L++ ITH +PF EIN  F+ M  GE 
Sbjct: 300 LLTGRTIKGTVFGGWKSKDSVPKLVALYRQKKFPLDELITHVLPFEEINDGFDLMRSGES 359

Query: 346 LRCII 350
           +R I+
Sbjct: 360 IRTIL 364

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365

>gnl|CDD|176240 cd08279, Zn_ADH_class_III, Class III alcohol dehydrogenase

 Score =  352 bits (906), Expect = e-121
 Identities = 146/369 (39%), Positives = 204/369 (55%), Gaps = 38/369 (10%)

Query: 12  KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL-FPRIFGH 70
           +AAV  E GKPL I++VE+  P   EV ++I    LC +DL+     G  P   P + GH
Sbjct: 2   RAAVLHEVGKPLEIEEVELDDPGPGEVLVRIAAAGLCHSDLHVVT--GDLPAPLPAVLGH 59

Query: 71  EAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHC------------------------ 106
           E AGVVE VG GV+ ++ GDHV+  +   CG CR+C                        
Sbjct: 60  EGAGVVEEVGPGVTGVKPGDHVVLSWIPACGTCRYCSRGQPNLCDLGAGILGGQLPDGTR 119

Query: 107 RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 166
           RF+ +GEPV    G  TF+EYTVV    V KI+   PLD+  +L CGV+TG+GA +N A+
Sbjct: 120 RFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIPLDRAALLGCGVTTGVGAVVNTAR 179

Query: 167 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDR 226
              G +VAV G G VGL A +GARIAGASRII VD   ++ E A++FG T  VN SE D 
Sbjct: 180 VRPGDTVAVIGCGGVGLNAIQGARIAGASRIIAVDPVPEKLELARRFGATHTVNASEDD- 238

Query: 227 PIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN 285
              E + ++T+G G D + E  G    +  A      G G AV+VG+        T  + 
Sbjct: 239 -AVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKG-GTAVVVGMGPPG---ETVSLP 293

Query: 286 ----VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMV 341
                L+E+ L+G+ +G+  PR D+P ++D+Y   +L+L++ +T R    EIN+AF  M+
Sbjct: 294 ALELFLSEKRLQGSLYGSANPRRDIPRLLDLYRAGRLKLDELVTRRYSLDEINEAFADML 353

Query: 342 KGEGLRCII 350
            GE  R +I
Sbjct: 354 AGENARGVI 362

Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 363

>gnl|CDD|176239 cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydrogenase

 Score =  292 bits (749), Expect = 5e-97
 Identities = 133/364 (36%), Positives = 190/364 (52%), Gaps = 34/364 (9%)

Query: 9   LTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIF 68
           +   AAV  E G P +++DVE+  P+  EV ++I  T +C TDL   +    TPL P + 
Sbjct: 1   MKTTAAVVREPGGPFVLEDVELDDPRPDEVLVRIVATGICHTDLVVRDGGLPTPL-PAVL 59

Query: 69  GHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCR--------------------- 107
           GHE AGVVE+VG  V+ L+ GDHV+  F   CG+C +C                      
Sbjct: 60  GHEGAGVVEAVGSAVTGLKPGDHVVLSFA-SCGECANCLSGHPAYCENFFPLNFSGRRPD 118

Query: 108 -----FSINGEPVN-HFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGAT 161
                   +G PV+ HF G S+F+ Y VVH   V K++   PL+ +  L CG+ TG GA 
Sbjct: 119 GSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKVDKDVPLELLAPLGCGIQTGAGAV 178

Query: 162 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT 221
           LNV KP  GSS+AVFG GAVGLAA   A+IAG + II VD    R E AK+ G T  +N 
Sbjct: 179 LNVLKPRPGSSIAVFGAGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAKELGATHVINP 238

Query: 222 SEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMT 281
            E D  +   I E+T GGVD +++ TG    +  A + +    G   LVG P   A    
Sbjct: 239 KEED--LVAAIREITGGGVDYALDTTGVPAVIEQAVDALAPR-GTLALVGAPPPGAEVTL 295

Query: 282 KPINVLNE-RTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYM 340
              ++L   +T++G   G+  P+  +P ++++Y   +   +K +T   PF +IN+A    
Sbjct: 296 DVNDLLVSGKTIRGVIEGDSVPQEFIPRLIELYRQGKFPFDKLVTFY-PFEDINQAIADS 354

Query: 341 VKGE 344
             G+
Sbjct: 355 ESGK 358

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 365

>gnl|CDD|176241 cd08281, liver_ADH_like1, Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

 Score =  283 bits (726), Expect = 1e-93
 Identities = 145/373 (38%), Positives = 203/373 (54%), Gaps = 38/373 (10%)

Query: 12  KAAVAWEAG--------KPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL 63
           +AAV  E G        +PL+I++VE+ PP   EV +KI    LC +DL         PL
Sbjct: 2   RAAVLRETGAPTPYADSRPLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVINGDRPRPL 61

Query: 64  FPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHC----------------- 106
            P   GHEAAGVV  VGEGV+DLEVGDHV+ VF   CG CR C                 
Sbjct: 62  -PMALGHEAAGVVVEVGEGVTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGA 120

Query: 107 --------RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGL 158
                   R  + G  +NH LG S F+EY VV    V KI+   PL+   +  C V TG+
Sbjct: 121 GTLLSGGRRLRLRGGEINHHLGVSAFAEYAVVSRRSVVKIDKDVPLEIAALFGCAVLTGV 180

Query: 159 GATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF 218
           GA +N A    G SVAV GLG VGL+A  GA  AGAS+++ VD +  +   A++ G T  
Sbjct: 181 GAVVNTAGVRPGQSVAVVGLGGVGLSALLGAVAAGASQVVAVDLNEDKLALARELGATAT 240

Query: 219 VNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAV 278
           VN  + +    E + E+T GGVD + E  G++  + +A+E    G G  V  G+P  +A 
Sbjct: 241 VNAGDPN--AVEQVRELTGGGVDYAFEMAGSVPALETAYEITRRG-GTTVTAGLPDPEAR 297

Query: 279 FMTKPIN-VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAF 337
                ++ V  ERTLKG++ G+  PR D+P  + +Y++ +L ++K +THR+P  EIN+ F
Sbjct: 298 LSVPALSLVAEERTLKGSYMGSCVPRRDIPRYLALYLSGRLPVDKLLTHRLPLDEINEGF 357

Query: 338 EYMVKGEGLRCII 350
           + +  GE +R +I
Sbjct: 358 DRLAAGEAVRQVI 370

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to the corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 371

>gnl|CDD|188504 TIGR03989, Rxyl_3153, oxidoreductase, Rxyl_3153 family

 Score =  249 bits (638), Expect = 2e-80
 Identities = 127/369 (34%), Positives = 196/369 (53%), Gaps = 34/369 (9%)

Query: 12  KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHE 71
           KAAV W  G+P  ++++E+  P+A EV +K+  + LC +D +        P +P + GHE
Sbjct: 3   KAAVLWGPGQPWEVEEIELDDPKAGEVLVKLVASGLCHSDEHLVTGDLPMPRYPILGGHE 62

Query: 72  AAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHC------------------------- 106
            AGVV  VG GV+ ++ GDHV+  F   CG CR C                         
Sbjct: 63  GAGVVTKVGPGVTGVKPGDHVVLSFIPACGRCRWCSTGLQNLCDLGAALLTGSQISDGTY 122

Query: 107 RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 166
           RF  +G+ V       TFSEYTVV    V KI+   PLDK C++ CGV TG G+ +N+A 
Sbjct: 123 RFHADGQDVGQMCLLGTFSEYTVVPEASVVKIDDDIPLDKACLVGCGVPTGWGSAVNIAD 182

Query: 167 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDR 226
              G +V V G+G VG+ A +GA +AGA ++I VD    + E+A KFG T    + E   
Sbjct: 183 VRPGDTVVVMGIGGVGINAVQGAAVAGARKVIAVDPVEFKREQALKFGATHAFASMEE-- 240

Query: 227 PIQEVIAEMTNG-GVDRSVECTGNID-NMIS-AFECVHDGWGVAVLVGV--PSKDAVFMT 281
            +Q ++ E+TNG G D+++   G +D   I+ A      G G  V+ G+   +   V + 
Sbjct: 241 AVQ-LVRELTNGQGADKTIITVGEVDGEHIAEALSATRKG-GRVVVTGLGPMADVDVKVN 298

Query: 282 KPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMV 341
                L ++ L+GT FG   PR D+P ++++Y   +L+L++ IT      +IN+ ++ M+
Sbjct: 299 LFELTLLQKELQGTLFGGANPRADIPRLLELYRAGKLKLDELITRTYTLDQINEGYQDML 358

Query: 342 KGEGLRCII 350
            G+ +R +I
Sbjct: 359 DGKNIRGVI 367

This model describes a clade within the family pfam00107 of zinc-binding dehydrogenases. The family pfam00107 contains class III alcohol dehydrogenases, including enzymes designated S-(hydroxymethyl)glutathione dehydrogenase and NAD/mycothiol-dependent formaldehyde dehydrogenase. Members of the current family occur only in species that contain the very small protein mycofactocin (TIGR03969), a possible cofactor precursor, and radical SAM protein TIGR03962. We name this family for Rxyl_3153, where the lone member of the family co-clusters with these markers in Rubrobacter xylanophilus [Unknown function, Enzymes of unknown specificity]. Length = 369

>gnl|CDD|132492 TIGR03451, mycoS_dep_FDH, S-(hydroxymethyl)mycothiol dehydrogenase

 Score =  241 bits (617), Expect = 2e-77
 Identities = 133/360 (36%), Positives = 196/360 (54%), Gaps = 23/360 (6%)

Query: 10  TCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFG 69
           T +  +A   G P+ ++ + V  P   EV + I+   +C TDL++ E  G    FP + G
Sbjct: 1   TVRGVIARSKGAPVELETIVVPDPGPGEVIVDIQACGVCHTDLHYREG-GINDEFPFLLG 59

Query: 70  HEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCR-------FS----------ING 112
           HEAAGVVE+VGEGV+D+  GD+V+  +   CG CR C+       F            +G
Sbjct: 60  HEAAGVVEAVGEGVTDVAPGDYVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKMTLTDG 119

Query: 113 EPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSS 172
             ++  LG   F+E T+VH+G   K++P A      +L CGV  GLGA +N    +RG S
Sbjct: 120 TELSPALGIGAFAEKTLVHAGQCTKVDPAADPAAAGLLGCGVMAGLGAAVNTGGVKRGDS 179

Query: 173 VAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVI 232
           VAV G G VG AA  GA +AGAS+II VD   ++ E A++FG T  VN+S  D P++  I
Sbjct: 180 VAVIGCGGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVNSSGTD-PVEA-I 237

Query: 233 AEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNE-R 290
             +T G G D  ++  G  +    AF    D  G  VLVGVP+ D       ++V     
Sbjct: 238 RALTGGFGADVVIDAVGRPETYKQAFY-ARDLAGTVVLVGVPTPDMTLELPLLDVFGRGG 296

Query: 291 TLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCII 350
            LK +++G+  P  D P +VD+Y+  +L L+ F+T RI   ++ +AF+ M  G+ LR ++
Sbjct: 297 ALKSSWYGDCLPERDFPMLVDLYLQGRLPLDAFVTERIGLDDVEEAFDKMHAGDVLRSVV 356

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione [Cellular processes, Detoxification]. Length = 358

>gnl|CDD|176224 cd08263, Zn_ADH10, Alcohol dehydrogenases of the MDR family

 Score =  214 bits (546), Expect = 1e-66
 Identities = 118/376 (31%), Positives = 174/376 (46%), Gaps = 46/376 (12%)

Query: 12  KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPR--IFG 69
           KAAV      PL I+++ V  P+  E+ I++    +C +DL+    KG+ P FP   + G
Sbjct: 2   KAAVLKGPNPPLTIEEIPVPRPKEGEILIRVAACGVCHSDLHVL--KGELP-FPPPFVLG 58

Query: 70  HEAAGVVESVGEGVSD---LEVGDHVLPVFTGECGDCRHC---------RFSIN------ 111
           HE +G V  VG  V +   L VGD V+  F   CG CR+C          F         
Sbjct: 59  HEISGEVVEVGPNVENPYGLSVGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGT 118

Query: 112 ------------GEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLG 159
                       G PV  +      +EY VV +  +A +       +  +L C   T  G
Sbjct: 119 LYDGTTRLFRLDGGPVYMYSM-GGLAEYAVVPATALAPLPESLDYTESAVLGCAGFTAYG 177

Query: 160 ATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFV 219
           A  + A    G +VAV G+G VG +A + A+  GAS II VD   ++  +AK+ G T  V
Sbjct: 178 ALKHAADVRPGETVAVIGVGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAKELGATHTV 237

Query: 220 NTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAV 278
           N ++ D      I E+T G GVD  VE  G  +    A + V DG G AV+VG+    A 
Sbjct: 238 NAAKEDAV--AAIREITGGRGVDVVVEALGKPETFKLALDVVRDG-GRAVVVGLAPGGAT 294

Query: 279 --FMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKA 336
                  + V     + G++    +PR DLP +V +  + +L+ E  +TH+    EIN+A
Sbjct: 295 AEIPITRL-VRRGIKIIGSY--GARPRQDLPELVGLAASGKLDPEALVTHKYKLEEINEA 351

Query: 337 FEYMVKGEG-LRCIIS 351
           +E + KG    R I+ 
Sbjct: 352 YENLRKGLIHGRAIVE 367

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 367

>gnl|CDD|176178 cd05188, MDR, Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  201 bits (513), Expect = 6e-63
 Identities = 83/278 (29%), Positives = 126/278 (45%), Gaps = 8/278 (2%)

Query: 37  EVRIKIKYTSLCRTDLYFWESKGQTPL-FPRIFGHEAAGVVESVGEGVSDLEVGDHVLPV 95
           EV ++++   LC TDL+        P   P I GHE AGVV  VG GV+ ++VGD V+ +
Sbjct: 1   EVLVRVEAAGLCGTDLHIRRGGYPPPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVL 60

Query: 96  FTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVS 155
               CG C  CR    G  +        F+EY VV +  +  +     L++  +L   ++
Sbjct: 61  PNLGCGTCELCRELCPGGGILGEGLDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLA 120

Query: 156 TGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV 215
           T   A       + G +V V G G VGL AA+ A+ AGA R+I  DRS ++ E AK+ G 
Sbjct: 121 TAYHALRRAGVLKPGDTVLVLGAGGVGLLAAQLAKAAGA-RVIVTDRSDEKLELAKELGA 179

Query: 216 TDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSK 275
              ++  E D    E +     GG D  ++  G  + +  A   +  G G  V+VG  S 
Sbjct: 180 DHVIDYKEEDLE--EELRLTGGGGADVVIDAVGGPETLAQALRLLRPG-GRIVVVGGTSG 236

Query: 276 DAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMY 313
                     +  E T+ G+  G  +   D    +D+ 
Sbjct: 237 GPPLDDLRRLLFKELTIIGSTGGTRE---DFEEALDLL 271

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 271

>gnl|CDD|223991 COG1063, Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

 Score =  196 bits (499), Expect = 8e-60
 Identities = 100/346 (28%), Positives = 152/346 (43%), Gaps = 20/346 (5%)

Query: 12  KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDL-YFWESKGQTPLFPRIFGH 70
           KAAV +  G  + +++     P   +V I++  T +C +DL  +   +   P    I GH
Sbjct: 2   KAAVVYVGGGDVRLEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPFVPPGDIILGH 61

Query: 71  EAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCR-----------FSINGEPVNHFL 119
           E  G V  VG  V   +VGD V+      CG CR+CR           F           
Sbjct: 62  EFVGEVVEVGV-VRGFKVGDRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAGLGGGID 120

Query: 120 GTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLG 179
           G   F+EY  V +       P    ++   L+  ++T        A    G +V V G G
Sbjct: 121 GG--FAEYVRVPADFNLAKLPDGIDEEAAALTEPLATAYHGHAERAAVRPGGTVVVVGAG 178

Query: 180 AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG- 238
            +GL A   A++ GAS +I VDRS +R E AK+ G  D V     D      I E+T G 
Sbjct: 179 PIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNPSEDDAG-AEILELTGGR 237

Query: 239 GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFG 298
           G D  +E  G+   +  A E +  G G  V+VGV   + + +   + V  E TL+G+   
Sbjct: 238 GADVVIEAVGSPPALDQALEALRPG-GTVVVVGVYGGEDIPLPAGLVVSKELTLRGSL-- 294

Query: 299 NYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGE 344
               R D    +D+  + +++ EK ITHR+P  +  +A+E     +
Sbjct: 295 RPSGREDFERALDLLASGKIDPEKLITHRLPLDDAAEAYELFADRK 340

Length = 350

>gnl|CDD|223992 COG1064, AdhP, Zn-dependent alcohol dehydrogenases [General function prediction only]

 Score =  188 bits (480), Expect = 3e-57
 Identities = 116/352 (32%), Positives = 168/352 (47%), Gaps = 30/352 (8%)

Query: 12  KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHE 71
           KAAV  + G+PL I++V V  P   EV IK++   +C TDL+  +     P  P I GHE
Sbjct: 5   KAAVLKKFGQPLEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPVPKLPLIPGHE 64

Query: 72  AAGVVESVGEGVSDLEVGDHV-LPVFTGECGDCRHCRFSINGEPVN----HFLGTST--- 123
             G V  VGEGV+ L+VGD V +      CG+C +CR   +G           G +T   
Sbjct: 65  IVGTVVEVGEGVTGLKVGDRVGVGWLVISCGECEYCR---SGNENLCPNQKITGYTTDGG 121

Query: 124 FSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGL 183
           ++EY VV +  V KI     L +   L C   T   A L  A  + G  VAV G G +G 
Sbjct: 122 YAEYVVVPARYVVKIPEGLDLAEAAPLLCAGITTYRA-LKKANVKPGKWVAVVGAGGLGH 180

Query: 184 AAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRS 243
            A + A+  GA  +I + RS ++ E AKK G    +N+S+ D    E + E+     D  
Sbjct: 181 MAVQYAKAMGA-EVIAITRSEEKLELAKKLGADHVINSSDSDAL--EAVKEI----ADAI 233

Query: 244 VECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN--VLNERTLKGTFFGNYK 301
           ++  G    +  + + +  G G  VLVG+P         P    +L E ++ G+  G   
Sbjct: 234 IDTVGPAT-LEPSLKALRRG-GTLVLVGLPGGGP-IPLLPAFLLILKEISIVGSLVGT-- 288

Query: 302 PRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGL-RCIISM 352
            R DL   +D     +++ E  I   IP  EIN+A+E M KG+   R +I M
Sbjct: 289 -RADLEEALDFAAEGKIKPE--ILETIPLDEINEAYERMEKGKVRGRAVIDM 337

Length = 339

>gnl|CDD|176198 cd08236, sugar_DH, NAD(P)-dependent sugar dehydrogenases

 Score =  184 bits (470), Expect = 1e-55
 Identities = 103/354 (29%), Positives = 159/354 (44%), Gaps = 44/354 (12%)

Query: 14  AVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDL--YFWESKGQTPLFPRIFGHE 71
           A+       L  +D+    P   EV +K+K   +C +D+  Y           P + GHE
Sbjct: 3   ALVLTGPGDLRYEDIPKPEPGPGEVLVKVKACGICGSDIPRYL---GTGAYHPPLVLGHE 59

Query: 72  AAGVVESVGEGVSDLEVGDHV-----LPVFTGECGDCRHCRFSINGEP---VNH-FLGTS 122
            +G VE VG GV DL VGD V     LP     CG C +C+    GE     N+ ++G+ 
Sbjct: 60  FSGTVEEVGSGVDDLAVGDRVAVNPLLP-----CGKCEYCK---KGEYSLCSNYDYIGSR 111

Query: 123 ---TFSEYTVVHSGCVAKINPLAPLDKVCILSCG----VSTGLGATLNVAKPERGSSVAV 175
               F+EY  V +  + KI    P D V           +  L A + +A    G +V V
Sbjct: 112 RDGAFAEYVSVPARNLIKI----P-DHVDYEEAAMIEPAAVALHA-VRLAGITLGDTVVV 165

Query: 176 FGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEM 235
            G G +GL A +  +I GA R+I VD   ++   A++ G  D +N  E D    E + E+
Sbjct: 166 IGAGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVARELGADDTINPKEED---VEKVREL 222

Query: 236 TNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN--VLNERTL 292
           T G G D  +E  G+   +  A      G G  VLVG+P  D     +     +  E T+
Sbjct: 223 TEGRGADLVIEAAGSPATIEQALALARPG-GKVVLVGIPYGDVTLSEEAFEKILRKELTI 281

Query: 293 KGTFFGNYKPRT--DLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGE 344
           +G++     P    +  + +D+  + ++++E  ITHR+P  +   AFE +   E
Sbjct: 282 QGSWNSYSAPFPGDEWRTALDLLASGKIKVEPLITHRLPLEDGPAAFERLADRE 335

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Horse liver alcohol dehydrogenase is a dimeric enzyme and each subunit has two domains. The NAD binding domain is in a Rossmann fold and the catalytic domain contains a zinc ion to which substrates bind. There is a cleft between the domains that closes upon formation of the ternary complex. Length = 343

>gnl|CDD|176196 cd08234, threonine_DH_like, L-threonine dehydrogenase

 Score =  180 bits (460), Expect = 3e-54
 Identities = 110/357 (30%), Positives = 172/357 (48%), Gaps = 43/357 (12%)

Query: 12  KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL-FPRIFGH 70
           KA V +E    L +++V V  P   EV IK+    +C TDL+ +E  G+     P + GH
Sbjct: 2   KALV-YEGPGELEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYE--GEFGAAPPLVPGH 58

Query: 71  EAAGVVESVGEGVSDLEVGDHVLPVFTGE----CGDCRHCRFSINGEPVNHF------LG 120
           E AGVV +VG  V+  +VGD V      +    CG+C +CR    G P  +       +G
Sbjct: 59  EFAGVVVAVGSKVTGFKVGDRV----AVDPNIYCGECFYCR---RGRP--NLCENLTAVG 109

Query: 121 TST---FSEYTVVHSGCVAKI-NPLAPLDKVCI--LSCGVSTGLGATLNVAKPERGSSVA 174
            +    F+EY VV +  V KI + L+  +      LSC V    G  L++   + G SV 
Sbjct: 110 VTRNGGFAEYVVVPAKQVYKIPDNLSFEEAALAEPLSCAVH---G--LDLLGIKPGDSVL 164

Query: 175 VFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAE 234
           VFG G +GL  A+  ++ GASR+   + + ++ E AKK G T+ V+ S  D    E   E
Sbjct: 165 VFGAGPIGLLLAQLLKLNGASRVTVAEPNEEKLELAKKLGATETVDPSRED---PEAQKE 221

Query: 235 MTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLN-ERTLK 293
               G D  +E TG    +  A E    G G  ++ GV + DA     P  +   E T+ 
Sbjct: 222 DNPYGFDVVIEATGVPKTLEQAIEYARRG-GTVLVFGVYAPDARVSISPFEIFQKELTII 280

Query: 294 GTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCII 350
           G+F   Y      P  + +  + +++++  ++HR+P  E+ +A E M  G  L+ ++
Sbjct: 281 GSFINPYT----FPRAIALLESGKIDVKGLVSHRLPLEEVPEALEGMRSGGALKVVV 333

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 334

>gnl|CDD|176195 cd08233, butanediol_DH_like, (2R,3R)-2,3-butanediol dehydrogenase

 Score =  176 bits (448), Expect = 3e-52
 Identities = 105/347 (30%), Positives = 165/347 (47%), Gaps = 35/347 (10%)

Query: 14  AVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLY-------FWESKGQTPL--- 63
           A  +   K + +++V   P +  EV+IK+ +  +C +DL+       F  ++G   L   
Sbjct: 3   AARYHGRKDIRVEEVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGE 62

Query: 64  -FPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNH----- 117
             P   GHE +GVV  VG GV+  +VGD V+   T +CG C  C+    G   N      
Sbjct: 63  TAPVTLGHEFSGVVVEVGSGVTGFKVGDRVVVEPTIKCGTCGACK---RGLY-NLCDSLG 118

Query: 118 FLGTST----FSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSV 173
           F+G       F+EY VV +  V K+    PL+    L   ++    A +  +  + G + 
Sbjct: 119 FIGLGGGGGGFAEYVVVPAYHVHKLPDNVPLE-EAALVEPLAVAWHA-VRRSGFKPGDTA 176

Query: 174 AVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIA 233
            V G G +GL      + AGAS+II  + S  R E A++ G T  ++ +E D  +   + 
Sbjct: 177 LVLGAGPIGLLTILALKAAGASKIIVSEPSEARRELAEELGATIVLDPTEVD--VVAEVR 234

Query: 234 EMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTL 292
           ++T G GVD S +C G    + +A + +    G AV V +  K   F    + VL E+TL
Sbjct: 235 KLTGGGGVDVSFDCAGVQATLDTAIDALRPR-GTAVNVAIWEKPISFNPNDL-VLKEKTL 292

Query: 293 KGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEI-NKAFE 338
            G+    Y  R D   V+D+  + +++ E  IT RIP  +I  K FE
Sbjct: 293 TGSI--CY-TREDFEEVIDLLASGKIDAEPLITSRIPLEDIVEKGFE 336

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Length = 351

>gnl|CDD|176222 cd08261, Zn_ADH7, Alcohol dehydrogenases of the MDR family

 Score =  173 bits (441), Expect = 3e-51
 Identities = 108/340 (31%), Positives = 163/340 (47%), Gaps = 32/340 (9%)

Query: 20  GKPLIIQDVEVAPPQAM--EVRIKIKYTSLCRTDLYFWESKGQTPLF--PRIFGHEAAGV 75
            KP  ++ V++  P     EV +++K   +C +DL+ +   G+ P    PRI GHE +G 
Sbjct: 7   EKPGRLEVVDIPEPVPGAGEVLVRVKRVGICGSDLHIYH--GRNPFASYPRILGHELSGE 64

Query: 76  VESVGEGVSDLEVGDHV--LPVFTGECGDCRHCRFSINGEP----VNHFLG---TSTFSE 126
           V  VGEGV+ L+VGD V   P     CG+C  CR    G P        LG      F+E
Sbjct: 65  VVEVGEGVAGLKVGDRVVVDPYI--SCGECYACR---KGRPNCCENLQVLGVHRDGGFAE 119

Query: 127 YTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAA 186
           Y VV +  +  +     LD+  ++   ++ G  A    A    G +V V G G +GL   
Sbjct: 120 YIVVPADAL-LVPEGLSLDQAALVEP-LAIGAHAV-RRAGVTAGDTVLVVGAGPIGLGVI 176

Query: 187 EGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVE 245
           + A+  GA R+I VD   +R E A++ G  D +N  + D  +   + E+T+G G D  ++
Sbjct: 177 QVAKARGA-RVIVVDIDDERLEFARELGADDTINVGDED--VAARLRELTDGEGADVVID 233

Query: 246 CTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTD 305
            TGN  +M  A E V  G G  VLVG+      F         E T+ G+       R D
Sbjct: 234 ATGNPASMEEAVELVAHG-GRVVLVGLSKGPVTFPDPEF-HKKELTILGSRNAT---RED 288

Query: 306 LPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG 345
            P V+D+  + +++ E  ITHR PF ++ +AF+      G
Sbjct: 289 FPDVIDLLESGKVDPEALITHRFPFEDVPEAFDLWEAPPG 328

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176188 cd05285, sorbitol_DH, Sorbitol dehydrogenase

 Score =  171 bits (435), Expect = 2e-50
 Identities = 99/374 (26%), Positives = 161/374 (43%), Gaps = 80/374 (21%)

Query: 21  KPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLF----PRIFGHEAAGVV 76
             L +++  +  P   EV ++++   +C +D+++++  G+   F    P + GHE+AG V
Sbjct: 8   GDLRLEERPIPEPGPGEVLVRVRAVGICGSDVHYYK-HGRIGDFVVKEPMVLGHESAGTV 66

Query: 77  ESVGEGVSDLEVGDHV-----LPVFTGECGDCRHCRFSINGE----PVNHFLGTS----T 123
            +VG GV+ L+VGD V     +P        CR C F  +G     P   F  T     T
Sbjct: 67  VAVGSGVTHLKVGDRVAIEPGVP--------CRTCEFCKSGRYNLCPDMRFAATPPVDGT 118

Query: 124 FSEYTVVHSGCVAKIN------------PLAPLDKVCILSCGVSTGLGATLNVAKPERGS 171
              Y    +    K+             PL+    V + +C            A    G 
Sbjct: 119 LCRYVNHPADFCHKLPDNVSLEEGALVEPLS----VGVHAC----------RRAGVRPGD 164

Query: 172 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRP-IQE 230
           +V VFG G +GL  A  A+  GA++++  D    R E AK+ G T  VN    D P   E
Sbjct: 165 TVLVFGAGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAKELGATHTVNVRTEDTPESAE 224

Query: 231 VIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGW------GVAVLVGVPSKDAVFMTKP 283
            IAE+  G G D  +ECTG       A  C+          G  VLVG+   +      P
Sbjct: 225 KIAELLGGKGPDVVIECTG-------AESCIQTAIYATRPGGTVVLVGMGKPEVTL---P 274

Query: 284 INVLNER--TLKGTF-FGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYM 340
           ++  + R   ++G F + N       P+ +++  + +++++  ITHR P  +  +AFE  
Sbjct: 275 LSAASLREIDIRGVFRYAN-----TYPTAIELLASGKVDVKPLITHRFPLEDAVEAFETA 329

Query: 341 VKG--EGLRCIISM 352
            KG    ++ +I  
Sbjct: 330 AKGKKGVIKVVIEG 343

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 343

>gnl|CDD|176197 cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenase

 Score =  169 bits (431), Expect = 8e-50
 Identities = 100/360 (27%), Positives = 162/360 (45%), Gaps = 40/360 (11%)

Query: 12  KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHE 71
           KAAV       + +++V V  P   EV +K++   +C TD+            PRI GHE
Sbjct: 2   KAAV-LHGPNDVRLEEVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHTDLKPPRILGHE 60

Query: 72  AAGVVESVGEGVSDLEVGDHVLPVFTG-ECGDCRHCRFSINGEPV---NHFLGTST---- 123
            AG +  VG+GV+  +VGD V  V     CG+C +C     G      N+    +     
Sbjct: 61  IAGEIVEVGDGVTGFKVGDRVF-VAPHVPCGECHYCL---RGNENMCPNYKKFGNLYDGG 116

Query: 124 FSEYTVVHSGCVAK--INPLAPLDKVCI--------LSCGVSTGLGATLNVAKPERGSSV 173
           F+EY  V +  V +  +  L   D V          L+C +          A  + G +V
Sbjct: 117 FAEYVRVPAWAVKRGGVLKLP--DNVSFEEAALVEPLACCI-----NAQRKAGIKPGDTV 169

Query: 174 AVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIA 233
            V G G +GL  A  A+ +GA ++I  D +  R E AKK G    ++ +E D    E + 
Sbjct: 170 LVIGAGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKKLGADYTIDAAEEDLV--EKVR 227

Query: 234 EMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL--NER 290
           E+T+G G D  +  TG+ +    A E V  G G  +  G   K +  +    N++   E 
Sbjct: 228 ELTDGRGADVVIVATGSPEAQAQALELVRKG-GRILFFGGLPKGS-TVNIDPNLIHYREI 285

Query: 291 TLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCII 350
           T+ G++        D    +++  + +++++  ITHR P  +I +AFE    G+ L+ +I
Sbjct: 286 TITGSY---AASPEDYKEALELIASGKIDVKDLITHRFPLEDIEEAFELAADGKSLKIVI 342

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 343

>gnl|CDD|176181 cd05278, FDH_like, Formaldehyde dehydrogenases

 Score =  163 bits (414), Expect = 2e-47
 Identities = 110/345 (31%), Positives = 150/345 (43%), Gaps = 21/345 (6%)

Query: 12  KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHE 71
           KA V    GK  + +  +       +  +++  TS+C +DL+ +           I GHE
Sbjct: 2   KALVYLGPGKIGLEEVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGVPGAKHGMILGHE 61

Query: 72  AAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCR-----FSINGEPVNHFLG--TSTF 124
             G V  VG  V  L+ GD V       CG CR CR        NG              
Sbjct: 62  FVGEVVEVGSDVKRLKPGDRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGNRIDGGQ 121

Query: 125 SEYTVVH--SGCVAKINPLAPLDKVCILSCGVSTGL-GATLNVAKPERGSSVAVFGLGAV 181
           +EY  V      +AKI    P +   +LS  + TG  GA L   KP  GS+VAV G G V
Sbjct: 122 AEYVRVPYADMNLAKIPDGLPDEDALMLSDILPTGFHGAELAGIKP--GSTVAVIGAGPV 179

Query: 182 GLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GV 240
           GL A  GAR+ GA+RII VD + +R + AK+ G TD +N    D  I E I E+T G GV
Sbjct: 180 GLCAVAGARLLGAARIIAVDSNPERLDLAKEAGATDIINPKNGD--IVEQILELTGGRGV 237

Query: 241 DRSVECTGNIDNMISAFECVHDGWGVAVLVGVP-SKDAVFMTKPINVLNERTLKGTFFGN 299
           D  +E  G  +    A + V  G G    VGV    D + +       N  T K      
Sbjct: 238 DCVIEAVGFEETFEQAVKVVRPG-GTIANVGVYGKPDPLPLLGEWFGKN-LTFKTGLVPV 295

Query: 300 YKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGE 344
              R  +P ++D+    +++  K ITHR P  +I KA+       
Sbjct: 296 ---RARMPELLDLIEEGKIDPSKLITHRFPLDDILKAYRLFDNKP 337

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 347

>gnl|CDD|176221 cd08260, Zn_ADH6, Alcohol dehydrogenases of the MDR family

 Score =  162 bits (413), Expect = 3e-47
 Identities = 99/350 (28%), Positives = 152/350 (43%), Gaps = 40/350 (11%)

Query: 12  KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHE 71
           +AAV  E G+PL I++V    P    V ++++   +CR+D + W+        P + GHE
Sbjct: 2   RAAVYEEFGEPLEIREVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDPDVTLPHVPGHE 61

Query: 72  AAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCR--------------FSINGEPVNH 117
            AGVV  VGE VS   VGD V   F   CG C +CR              F+  G     
Sbjct: 62  FAGVVVEVGEDVSRWRVGDRVTVPFVLGCGTCPYCRAGDSNVCEHQVQPGFTHPG----- 116

Query: 118 FLGTSTFSEYTVVHSGCVAKINPLAPLDKV-----CILSCGVSTGLGATLNVAKPERGSS 172
                +F+EY  V     A +N +   D V       L C  +T   A ++ A+ + G  
Sbjct: 117 -----SFAEYVAVPR---ADVNLVRLPDDVDFVTAAGLGCRFATAFRALVHQARVKPGEW 168

Query: 173 VAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVI 232
           VAV G G VGL+A   A   GA R+I VD    + E A++ G    VN SE +      +
Sbjct: 169 VAVHGCGGVGLSAVMIASALGA-RVIAVDIDDDKLELARELGAVATVNASEVEDV-AAAV 226

Query: 233 AEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN--VLNER 290
            ++T GG   SV+  G  +   ++   +    G  V VG+   +   +  P++  V  E 
Sbjct: 227 RDLTGGGAHVSVDALGIPETCRNSVASLRKR-GRHVQVGLTLGEEAGVALPMDRVVAREL 285

Query: 291 TLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYM 340
            + G+  G   P     +++ +  + +L+ E  +   I   E   A   M
Sbjct: 286 EIVGS-HGM--PAHRYDAMLALIASGKLDPEPLVGRTISLDEAPDALAAM 332

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 345

>gnl|CDD|176201 cd08239, THR_DH_like, L-threonine dehydrogenase (TDH)-like

 Score =  161 bits (409), Expect = 1e-46
 Identities = 102/337 (30%), Positives = 157/337 (46%), Gaps = 20/337 (5%)

Query: 25  IQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIF-GHEAAGVVESVGEGV 83
           +++  V  P   EV +++K + LC +DL+++    + P +  +  GHE AGVV +VG GV
Sbjct: 14  LREFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRAPAYQGVIPGHEPAGVVVAVGPGV 73

Query: 84  SDLEVGDHVLPVFTGECGDCRHCR--FSIN--GEPVNH-FLGTSTFSEYTVVHSGCVAKI 138
           +   VGD V+      CG CR+CR  +      +   + +      +EY +V    +  +
Sbjct: 74  THFRVGDRVMVYHYVGCGACRNCRRGWMQLCTSKRAAYGWNRDGGHAEYMLVPEKTLIPL 133

Query: 139 NPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRII 198
                     +L CG+ T   A L         +V V G G VGL A   AR  GA  +I
Sbjct: 134 PDDLSFADGALLLCGIGTAYHA-LRRVGVSGRDTVLVVGAGPVGLGALMLARALGAEDVI 192

Query: 199 GVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAF 257
           GVD S +R E AK  G  DFV  S  D    + I E+T+G G D ++EC+GN      A 
Sbjct: 193 GVDPSPERLELAKALGA-DFVINSGQDDV--QEIRELTSGAGADVAIECSGNTAARRLAL 249

Query: 258 ECVHDGWGVAVLVGVPSKDAVFMTKPINVL--NERTLKGTFFGNYKPRTDLPSVVDMYMN 315
           E V   WG  VLVG   +      +  N L   +RTL G++   Y    D+    +    
Sbjct: 250 EAVRP-WGRLVLVGEGGE---LTIEVSNDLIRKQRTLIGSW---YFSVPDMEECAEFLAR 302

Query: 316 KQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISM 352
            +LE+++ +THR    +  +A+    +GE  + +   
Sbjct: 303 HKLEVDRLVTHRFGLDQAPEAYALFAQGESGKVVFVF 339

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339

>gnl|CDD|176193 cd08231, MDR_TM0436_like, Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

 Score =  159 bits (405), Expect = 9e-46
 Identities = 97/368 (26%), Positives = 160/368 (43%), Gaps = 37/368 (10%)

Query: 11  CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPR--IF 68
            +AAV    GKPL I++V +   +   V ++++   +C +D++     G+ P  P   I 
Sbjct: 1   ARAAVLTGPGKPLEIREVPLPDLEPGAVLVRVRLAGVCGSDVHTV--AGRRPRVPLPIIL 58

Query: 69  GHEAAGVVESVGEGVSD------LEVGDHVL-PVFTGECGDCRHCR------------FS 109
           GHE  G V ++G GV+       L+VGD V   V    CG C  C             + 
Sbjct: 59  GHEGVGRVVALGGGVTTDVAGEPLKVGDRVTWSVGAP-CGRCYRCLVGDPTKCENRKKYG 117

Query: 110 IN-GEPVNHFLGTSTFSEYTVVHSGC-VAKINPLAPLDKVCILSCGVSTGLGATLNVAKP 167
                   H  G   ++E+  +  G  + ++    P +     +C ++T L A       
Sbjct: 118 HEASCDDPHLSGG--YAEHIYLPPGTAIVRVPDNVPDEVAAPANCALATVLAALDRAGPV 175

Query: 168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEH-DR 226
             G +V V G G +GL A   A++AGA R+I +D S +R E A++FG    ++  E  D 
Sbjct: 176 GAGDTVVVQGAGPLGLYAVAAAKLAGARRVIVIDGSPERLELAREFGADATIDIDELPDP 235

Query: 227 PIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN 285
             + ++ ++T G G D  +E +G+   +    E +  G G  VLVG  +        P  
Sbjct: 236 QRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRG-GTYVLVGSVAPAGTVPLDPER 294

Query: 286 -VLNERTLKGTFFGNYKPR--TDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVK 342
            V    T+ G    NY P         ++   ++     + +THR P  +IN+A E    
Sbjct: 295 IVRKNLTIIGVH--NYDPSHLYRAVRFLERTQDRFP-FAELVTHRYPLEDINEALELAES 351

Query: 343 GEGLRCII 350
           G  L+ +I
Sbjct: 352 GTALKVVI 359

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 361

>gnl|CDD|176216 cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

 Score =  158 bits (402), Expect = 1e-45
 Identities = 97/341 (28%), Positives = 143/341 (41%), Gaps = 22/341 (6%)

Query: 14  AVAWEAGKPLIIQ--DVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL-FPRIFGH 70
           A  +  G   ++   +V V  P   EV +K+K   +C +DL+  +    T    P   GH
Sbjct: 3   AWRFHKGSKGLLVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVPTLTKLPLTLGH 62

Query: 71  EAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCR------FSINGEPVNHFLGTSTF 124
           E AG V  VG GV++ +VGD V       CG C  CR          G P     G   F
Sbjct: 63  EIAGTVVEVGAGVTNFKVGDRVAVPAVIPCGACALCRRGRGNLCLNQGMPGLGIDG--GF 120

Query: 125 SEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLA 184
           +EY VV +  +  +    P  +  + +  V T   A +   + + G +V V GLG +GL 
Sbjct: 121 AEYIVVPARALVPVPDGVPFAQAAVATDAVLTPYHAVVRAGEVKPGETVLVIGLGGLGLN 180

Query: 185 AAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSV 244
           A + A+  GA  +I VD   ++ E AK+ G  D V  S  D P  +  A    GG D   
Sbjct: 181 AVQIAKAMGA-AVIAVDIKEEKLELAKELGA-DEVLNSLDDSPKDKKAAG-LGGGFDVIF 237

Query: 245 ECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRT 304
           +  G       A + V  G G  V+VG+           + +  E  + G+F G      
Sbjct: 238 DFVGTQPTFEDAQKAVKPG-GRIVVVGLGRDKLTVDLSDL-IARELRIIGSFGG---TPE 292

Query: 305 DLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG 345
           DLP V+D+    +L          P  EI +  E + KG+ 
Sbjct: 293 DLPEVLDLIAKGKL---DPQVETRPLDEIPEVLERLHKGKV 330

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 338

>gnl|CDD|176184 cd05281, TDH, Threonine dehydrogenase

 Score =  153 bits (389), Expect = 1e-43
 Identities = 111/356 (31%), Positives = 161/356 (45%), Gaps = 47/356 (13%)

Query: 12  KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWE----SKGQTPLFPRI 67
           KA V  +AG    + +V V  P   EV IK+   S+C TD++ +E    ++ +    P I
Sbjct: 2   KAIVKTKAGPGAELVEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRI-KPPLI 60

Query: 68  FGHEAAGVVESVGEGVSDLEVGDHVLPVFTGE----CGDCRHCRFSINGEPVNH------ 117
           FGHE AG V  VGEGV+ ++VGD+V    + E    CG C  CR    G    H      
Sbjct: 61  FGHEFAGEVVEVGEGVTRVKVGDYV----SAETHIVCGKCYQCR---TGNY--HVCQNTK 111

Query: 118 FLGTST---FSEYTVVHSGCVAKINPLAPLDKVCI---LSCGVSTGLGATLNVAKPERGS 171
            LG  T   F+EY VV    + K +   P +   I   L   V T L   +       G 
Sbjct: 112 ILGVDTDGCFAEYVVVPEENLWKNDKDIPPEIASIQEPLGNAVHTVLAGDV------SGK 165

Query: 172 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEV 231
           SV + G G +GL A   A+ AGAS +I  D +  R E AKK G    +N  E D  + EV
Sbjct: 166 SVLITGCGPIGLMAIAVAKAAGASLVIASDPNPYRLELAKKMGADVVINPREED--VVEV 223

Query: 232 IAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERT 291
            +     GVD  +E +GN   +    + +  G G   ++G+P          I++ N   
Sbjct: 224 KSVTDGTGVDVVLEMSGNPKAIEQGLKALTPG-GRVSILGLPPGPV-----DIDLNNLVI 277

Query: 292 LKG-TFFGNYKPR--TDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGE 344
            KG T  G    +       V  +  + +++L   ITH++P  +  +AFE M  G+
Sbjct: 278 FKGLTVQGITGRKMFETWYQVSALLKSGKVDLSPVITHKLPLEDFEEAFELMRSGK 333

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 341

>gnl|CDD|176257 cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CAD)

 Score =  150 bits (381), Expect = 2e-42
 Identities = 103/354 (29%), Positives = 152/354 (42%), Gaps = 42/354 (11%)

Query: 11  CKAAVAWEAG-KPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL---FPR 66
            KAAV  E G KP  ++DV V  P   EV +K++ + +C TDL+     G  P+    P 
Sbjct: 1   MKAAVVEEFGEKPYEVKDVPVPEPGPGEVLVKLEASGVCHTDLHAA--LGDWPVKPKLPL 58

Query: 67  IFGHEAAGVVESVGEGVSDLEVGDHV-LPVFTGECGDCRHCRFSINGEPVN--HFLGTS- 122
           I GHE AGVV +VG GVS L+VGD V +      CG C +CR    G+     +   +  
Sbjct: 59  IGGHEGAGVVVAVGPGVSGLKVGDRVGVKWLYDACGKCEYCR---TGDETLCPNQKNSGY 115

Query: 123 ----TFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL 178
               TF+EY +  +  V  I      ++   L C   T   A L  A  + G  V + G 
Sbjct: 116 TVDGTFAEYAIADARYVTPIPDGLSFEQAAPLLCAGVTVYKA-LKKAGLKPGDWVVISGA 174

Query: 179 G------AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVI 232
           G       V  A A G       R+I +D   ++ E AK+ G   FV+  + D  ++ V 
Sbjct: 175 GGGLGHLGVQYAKAMGL------RVIAIDVGDEKLELAKELGADAFVDFKKSD-DVEAVK 227

Query: 233 AEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN--VLNER 290
                GG    V    +      A + +  G G  V VG+P     F+       VL   
Sbjct: 228 ELTGGGGAHAVVVTAVSAAAYEQALDYLRPG-GTLVCVGLPPGG--FIPLDPFDLVLRGI 284

Query: 291 TLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGE 344
           T+ G+  G    R DL   ++     ++   K     +P  ++N+ FE M +G+
Sbjct: 285 TIVGSLVGT---RQDLQEALEFAARGKV---KPHIQVVPLEDLNEVFEKMEEGK 332

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341

>gnl|CDD|176207 cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD) and related proteins

 Score =  147 bits (374), Expect = 1e-41
 Identities = 99/342 (28%), Positives = 146/342 (42%), Gaps = 28/342 (8%)

Query: 12  KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHE 71
           KAAV   AG PL  ++V V  P   EV IKI+   +C TDL+  E       +P + GHE
Sbjct: 1   KAAVVHAAGGPLEPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWGGSKYPLVPGHE 60

Query: 72  AAGVVESVGEGVSDLEVGDHV-LPVFTGECGDCRHCRFSINGEPVN--HFLGTST----- 123
             G V  VG GV   +VGD V +    G CG C +CR    G        + T       
Sbjct: 61  IVGEVVEVGAGVEGRKVGDRVGVGWLVGSCGRCEYCR---RGLENLCQKAVNTGYTTQGG 117

Query: 124 FSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGL 183
           ++EY V  +     +    PL +   L C   T   A L  A P  G  VAV G+G +G 
Sbjct: 118 YAEYMVADAEYTVLLPDGLPLAQAAPLLCAGITVYSA-LRDAGPRPGERVAVLGIGGLGH 176

Query: 184 AAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRS 243
            A + AR  G    + + RS  + E A+K G  + V++            +   GG D  
Sbjct: 177 LAVQYARAMGF-ETVAITRSPDKRELARKLGADEVVDSGAELD------EQAAAGGADVI 229

Query: 244 VECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA-VFMTKPINVLNERTLKGTFFGNYKP 302
           +    +     +A   +  G G  VLVG+P          P+ ++  +++ G+  G    
Sbjct: 230 LVTVVSGAAAEAALGGLRRG-GRIVLVGLPESPPFSPDIFPL-IMKRQSIAGSTHGG--- 284

Query: 303 RTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGE 344
           R DL   +D     ++   K +    P  + N+A+E M KG+
Sbjct: 285 RADLQEALDFAAEGKV---KPMIETFPLDQANEAYERMEKGD 323

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes, or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 330

>gnl|CDD|176244 cd08284, FDH_like_2, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

 Score =  144 bits (366), Expect = 2e-40
 Identities = 98/353 (27%), Positives = 151/353 (42%), Gaps = 25/353 (7%)

Query: 14  AVAWEAGKPLIIQDVEVAPPQAMEVR---IKIKYTSLCRTDLYFWESKGQTPLFPRIFGH 70
           AV ++   P  ++  EV  PQ  +     +K+   ++C +DL+ +     +     + GH
Sbjct: 3   AVVFK--GPGDVRVEEVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIPSTP-GFVLGH 59

Query: 71  EAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFS----- 125
           E  G V  VG  V  L+VGD V+  FT  CG+C +CR   +G      L     S     
Sbjct: 60  EFVGEVVEVGPEVRTLKVGDRVVSPFTIACGECFYCRRGQSGRCAKGGLFGYAGSPNLDG 119

Query: 126 ---EYTVV--HSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGA 180
              EY  V    G + K+      +   +L   + TG       A+   G +VAV G G 
Sbjct: 120 AQAEYVRVPFADGTLLKLPDGLSDEAALLLGDILPTGYFGAKR-AQVRPGDTVAVIGCGP 178

Query: 181 VGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-G 239
           VGL A   A++ GA+R+  VD   +R E A   G        E   P++ V  E T G G
Sbjct: 179 VGLCAVLSAQVLGAARVFAVDPVPERLERAAALGAE--PINFEDAEPVERV-REATEGRG 235

Query: 240 VDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGN 299
            D  +E  G    +  AF+ V    GV   VGV + +              TL+   FG 
Sbjct: 236 ADVVLEAVGGAAALDLAFDLVRP-GGVISSVGVHTAEEFPFPGLDAYNKNLTLR---FGR 291

Query: 300 YKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISM 352
              R+  P ++ +  + +L+LE  I HR+P  E  +A+    K + L+ ++  
Sbjct: 292 CPVRSLFPELLPLLESGRLDLEFLIDHRMPLEEAPEAYRLFDKRKVLKVVLDP 344

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 344

>gnl|CDD|176187 cd05284, arabinose_DH_like, D-arabinose dehydrogenase

 Score =  143 bits (364), Expect = 5e-40
 Identities = 98/354 (27%), Positives = 165/354 (46%), Gaps = 45/354 (12%)

Query: 12  KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWES---KGQTPLFPRIF 68
           KAA  +E GKPL ++DV V  P   +V +++    +C +DL+  +           P   
Sbjct: 2   KAARLYEYGKPLRLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTL 61

Query: 69  GHEAAGVVESVGEGVSDLEVGDHVL--PVFTGECGDCRHCRFSINGEPVNH-----FLGT 121
           GHE AG VE VG GV  L+ GD V+  P +   CG CR+CR    GE  N+     F G 
Sbjct: 62  GHENAGWVEEVGSGVDGLKEGDPVVVHPPWG--CGTCRYCR---RGEE-NYCENARFPGI 115

Query: 122 ST---FSEYTVVHSGCVAKINPLAPLDKVCILSC-GVSTGLGATLNVAKPERGSSVAVFG 177
            T   F+EY +V S  + K+       +   L+  G++        +   + GS+V V G
Sbjct: 116 GTDGGFAEYLLVPSRRLVKLPRGLDPVEAAPLADAGLTAYHAVKKALPYLDPGSTVVVIG 175

Query: 178 LGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTN 237
           +G +G  A +  R    + +I VDRS +  + A++ G    +N S+      E + E+T 
Sbjct: 176 VGGLGHIAVQILRALTPATVIAVDRSEEALKLAERLGADHVLNASDDVV---EEVRELTG 232

Query: 238 G-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVG------VPSKDAVFMTKPINVLNER 290
           G G D  ++  G+ + +  A + +  G G  V+VG      +P+ D V          E 
Sbjct: 233 GRGADAVIDFVGSDETLALAAKLLAKG-GRYVIVGYGGHGRLPTSDLVPT--------EI 283

Query: 291 TLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGE 344
           ++ G+ +G      +L  VV +  + ++++E     + P  + N+A + + +G 
Sbjct: 284 SVIGSLWGTR---AELVEVVALAESGKVKVE---ITKFPLEDANEALDRLREGR 331

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 340

>gnl|CDD|176245 cd08285, NADP_ADH, NADP(H)-dependent alcohol dehydrogenases

 Score =  143 bits (364), Expect = 7e-40
 Identities = 91/351 (25%), Positives = 142/351 (40%), Gaps = 37/351 (10%)

Query: 12  KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLY--FWESKGQTPLFPRIFG 69
           KA      GK   I +  +      +  ++    + C +D++  +  + G+      I G
Sbjct: 2   KAFAMLGIGKVGWI-EKPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGAPGERH--GMILG 58

Query: 70  HEAAGVVESVGEGVSDLEVGDHVL-PVFT--GECGDCR-----HCRFSINGEPVNHFLGT 121
           HEA GVVE VG  V D + GD V+ P  T        +          + G   ++F   
Sbjct: 59  HEAVGVVEEVGSEVKDFKPGDRVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKFSNFKD- 117

Query: 122 STFSEYTVVHS--GCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLG 179
             F+EY  V+     +A +      ++  +L   +STG       A  + G +VAVFG+G
Sbjct: 118 GVFAEYFHVNDADANLAPLPDGLTDEQAVMLPDMMSTGFHGAEL-ANIKLGDTVAVFGIG 176

Query: 180 AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG- 238
            VGL A  GAR+ GA RII V     R E AK++G TD V+    +  + E I ++T G 
Sbjct: 177 PVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGATDIVDY--KNGDVVEQILKLTGGK 234

Query: 239 GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFG 298
           GVD  +   G  D    A + +  G G    V    +D         +   R   G   G
Sbjct: 235 GVDAVIIAGGGQDTFEQALKVLKPG-GTISNVNYYGEDDY-------LPIPREEWGVGMG 286

Query: 299 NYKPRTDL--------PSVVDMYMNKQLELEKFITHRI-PFSEINKAFEYM 340
           +      L          +  +    +++  K +TH    F +I +A   M
Sbjct: 287 HKTINGGLCPGGRLRMERLASLIEYGRVDPSKLLTHHFFGFDDIEEALMLM 337

This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 351

>gnl|CDD|176202 cd08240, 6_hydroxyhexanoate_dh_like, 6-hydroxyhexanoate dehydrogenase

 Score =  138 bits (351), Expect = 4e-38
 Identities = 96/349 (27%), Positives = 148/349 (42%), Gaps = 37/349 (10%)

Query: 12  KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWE------SKGQTPL-- 63
           KAA   E GKPL   +++   P   EV +K+    +C +DL+ W+            L  
Sbjct: 2   KAAAVVEPGKPLEEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDD 61

Query: 64  ----FPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVF----TGECGDCRHCRFSINGEPV 115
                P + GHE  G V +VG   +D++VGD VL V+     GEC  C     ++  +  
Sbjct: 62  RGVKLPLVLGHEIVGEVVAVGPDAADVKVGDKVL-VYPWIGCGECPVCLAGDENLCAKG- 119

Query: 116 NHFLGTST---FSEYTVV-HSGCVAKINPLAPLDKVCILSCGVSTGLGA--TLNVAKPER 169
              LG      ++EY +V HS  +     L        L+C   T   A   L     + 
Sbjct: 120 -RALGIFQDGGYAEYVIVPHSRYLVDPGGL-DPALAATLACSGLTAYSAVKKLMPLVADE 177

Query: 170 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQ 229
              V + G G +GL A    +  G + II VD    + E AK  G    VN S+ D   +
Sbjct: 178 --PVVIIGAGGLGLMALALLKALGPANIIVVDIDEAKLEAAKAAGADVVVNGSDPDAAKR 235

Query: 230 EVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNE 289
             I +   GGVD  ++   N      AF+ +  G G  VLVG+   +A     P+  L  
Sbjct: 236 --IIKAAGGGVDAVIDFVNNSATASLAFDILAKG-GKLVLVGLFGGEATLPL-PLLPLRA 291

Query: 290 RTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFE 338
            T++G++ G+     +L  +V +   K  +L+       P S++N A +
Sbjct: 292 LTIQGSYVGSL---EELRELVALA--KAGKLKPIPLTERPLSDVNDALD 335

6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 350

>gnl|CDD|176243 cd08283, FDH_like_1, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1

 Score =  136 bits (346), Expect = 4e-37
 Identities = 109/386 (28%), Positives = 166/386 (43%), Gaps = 79/386 (20%)

Query: 14  AVAWEAGKPLIIQDVEVA--PPQAME----VRIKIKYTSLCRTDLYFWESKGQTPLFPR- 66
           A+ W  GK     DV V   P   +E      +++  T++C +DL+ +   G  P   + 
Sbjct: 3   ALVWH-GK----GDVRVEEVPDPKIEDPTDAIVRVTATAICGSDLHLYH--GYIPGMKKG 55

Query: 67  -IFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCR---FS------------- 109
            I GHE  GVVE VG  V +L+VGD V+  FT  CG+C +C+   +S             
Sbjct: 56  DILGHEFMGVVEEVGPEVRNLKVGDRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAK 115

Query: 110 INGEPVNHFLGTSTFS--------EYTVV---HSGCVAKINPLAPLDKVCILSCGVSTGL 158
           + G       G S  +        EY  V     G   KI      +K   LS  + TG 
Sbjct: 116 LYGHAGAGIFGYSHLTGGYAGGQAEYVRVPFADVGPF-KIPDDLSDEKALFLSDILPTGY 174

Query: 159 -GATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD 217
             A L   KP  G +VAV+G G VGL AA  A++ GA R+I +DR  +R E A+     +
Sbjct: 175 HAAELAEVKP--GDTVAVWGCGPVGLFAARSAKLLGAERVIAIDRVPERLEMARSHLGAE 232

Query: 218 FVNTSEHDRPIQEVIAEMTNG-GVDRSVEC---------------------TGNIDNMIS 255
            +N  E D  + E + E+T G G D  ++                      T   D +  
Sbjct: 233 TINFEEVDDVV-EALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALRE 291

Query: 256 AFECVHDGWGVAVLVGVPSKDAVFMTK-PINVLNER--TLKGTFFGNYKPRTDLPSVVDM 312
           A + V  G G   ++GV       + K PI     +  TL+    G    +  LP ++++
Sbjct: 292 AIQAVRKG-GTVSIIGVY---GGTVNKFPIGAAMNKGLTLRM---GQTHVQRYLPRLLEL 344

Query: 313 YMNKQLELEKFITHRIPFSEINKAFE 338
             + +L+    ITHR+P  +  +A++
Sbjct: 345 IESGELDPSFIITHRLPLEDAPEAYK 370

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 386

>gnl|CDD|176246 cd08286, FDH_like_ADH2, formaldehyde dehydrogenase (FDH)-like

 Score =  134 bits (339), Expect = 2e-36
 Identities = 109/346 (31%), Positives = 153/346 (44%), Gaps = 38/346 (10%)

Query: 12  KAAVAWEAGKPLIIQDVEVAPPQAME---VRIKIKYTSLCRTDLYFWESKGQTPLFP--R 66
           KA V    GK       +   P   E     +K+  T++C TDL+    KG  P     R
Sbjct: 2   KALVYHGPGKISW---EDRPKPTIQEPTDAIVKMLKTTICGTDLHIL--KGDVPTVTPGR 56

Query: 67  IFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPV-------NHFL 119
           I GHE  GVVE VG  V++ +VGD VL      CG C +CR  +            N   
Sbjct: 57  ILGHEGVGVVEEVGSAVTNFKVGDRVLISCISSCGTCGYCRKGLYSHCESGGWILGNLID 116

Query: 120 GTSTFSEYT-VVHS-GCVAKINPLAPLDKVCILSCGVSTGL-GATLNVAKPERGSSVAVF 176
           GT   +EY  + H+   + K+      +   +LS  + TG     LN  K + G +VA+ 
Sbjct: 117 GTQ--AEYVRIPHADNSLYKLPEGVDEEAAVMLSDILPTGYECGVLN-GKVKPGDTVAIV 173

Query: 177 GLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMT 236
           G G VGLAA   A++   S+II VD    R E AKK G T  VN+++ D    E + E+T
Sbjct: 174 GAGPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKKLGATHTVNSAKGD--AIEQVLELT 231

Query: 237 NG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI---NVLNERTL 292
           +G GVD  +E  G         E V  G G    VGV  K      + +   N+     L
Sbjct: 232 DGRGVDVVIEAVGIPATFELCQELVAPG-GHIANVGVHGKPVDLHLEKLWIKNITITTGL 290

Query: 293 KGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFE 338
             T           P ++ +  + +L+  K +THR   SEI KA++
Sbjct: 291 VDT--------NTTPMLLKLVSSGKLDPSKLVTHRFKLSEIEKAYD 328

This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 345

>gnl|CDD|176220 cd08259, Zn_ADH5, Alcohol dehydrogenases of the MDR family

 Score =  133 bits (336), Expect = 4e-36
 Identities = 95/350 (27%), Positives = 157/350 (44%), Gaps = 44/350 (12%)

Query: 12  KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL--FPRIFG 69
           KAA+  +  KPL I++V    P   EV IK+K   +C  DL FW  KG  P   +P I G
Sbjct: 2   KAAILHKPNKPLQIEEVPDPEPGPGEVLIKVKAAGVCYRDLLFW--KGFFPRGKYPLILG 59

Query: 70  HEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCR--------------FSINGEPV 115
           HE  G VE VGEGV   + GD V+  +   CG C +C                 ++G   
Sbjct: 60  HEIVGTVEEVGEGVERFKPGDRVILYYYIPCGKCEYCLSGEENLCRNRAEYGEEVDG--- 116

Query: 116 NHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAV 175
                   F+EY  V    + K+      +   + +C V T + A L  A  ++G +V V
Sbjct: 117 -------GFAEYVKVPERSLVKLPDNVSDESAALAACVVGTAVHA-LKRAGVKKGDTVLV 168

Query: 176 -FGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAE 234
               G VG+ A + A+  GA R+I V RS ++ +  K+ G    ++ S+      E + +
Sbjct: 169 TGAGGGVGIHAIQLAKALGA-RVIAVTRSPEKLKILKELGADYVIDGSK----FSEDVKK 223

Query: 235 MTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKG 294
           +  GG D  +E  G    +  +   ++ G G  VL+G  + D   +   + +L E  + G
Sbjct: 224 L--GGADVVIELVG-SPTIEESLRSLNKG-GRLVLIGNVTPDPAPLRPGLLILKEIRIIG 279

Query: 295 TFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGE 344
           +       + D+   + +   K+ +++  I   +   +IN+A E +  G+
Sbjct: 280 SISAT---KADVEEALKLV--KEGKIKPVIDRVVSLEDINEALEDLKSGK 324

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 332

>gnl|CDD|180054 PRK05396, tdh, L-threonine 3-dehydrogenase; Validated

 Score =  131 bits (333), Expect = 1e-35
 Identities = 108/365 (29%), Positives = 164/365 (44%), Gaps = 64/365 (17%)

Query: 12  KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWE----SKGQTPLFPRI 67
           KA V  +A   L + DV V  P   +V IK+K T++C TD++ +     ++   P+ P +
Sbjct: 2   KALVKLKAEPGLWLTDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPV-PMV 60

Query: 68  FGHEAAGVVESVGEGVSDLEVGDHVLPVFTGE----CGDCRHCR-----FSIN--GEPVN 116
            GHE  G V  VG  V+  +VGD V    +GE    CG CR+CR        N  G  VN
Sbjct: 61  VGHEFVGEVVEVGSEVTGFKVGDRV----SGEGHIVCGHCRNCRAGRRHLCRNTKGVGVN 116

Query: 117 HFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCI---LSCGVSTGLGATLNVAKPERGSSV 173
                  F+EY V+ +  V KI    P D   I       V T L  + ++     G  V
Sbjct: 117 R---PGAFAEYLVIPAFNVWKIPDDIPDDLAAIFDPFGNAVHTAL--SFDLV----GEDV 167

Query: 174 AVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIA 233
            + G G +G+ AA  A+  GA  ++  D +  R E A+K G T  VN ++ D  +++V+A
Sbjct: 168 LITGAGPIGIMAAAVAKHVGARHVVITDVNEYRLELARKMGATRAVNVAKED--LRDVMA 225

Query: 234 EMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN----VLN 288
           E+    G D  +E +G         + ++ G  +A+L G+P  D       I+    +  
Sbjct: 226 ELGMTEGFDVGLEMSGAPSAFRQMLDNMNHGGRIAML-GIPPGDM-----AIDWNKVIFK 279

Query: 289 ERTLKG--------TFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYM 340
             T+KG        T+   YK       +  +  +  L+L   ITHR P  +  K FE M
Sbjct: 280 GLTIKGIYGREMFETW---YK-------MSALLQSG-LDLSPIITHRFPIDDFQKGFEAM 328

Query: 341 VKGEG 345
             G+ 
Sbjct: 329 RSGQS 333

Length = 341

>gnl|CDD|176219 cd08258, Zn_ADH4, Alcohol dehydrogenases of the MDR family

 Score =  127 bits (320), Expect = 5e-34
 Identities = 80/282 (28%), Positives = 133/282 (47%), Gaps = 18/282 (6%)

Query: 25  IQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVS 84
           +++V    P   EV IK+    +C +DL+ ++        P + GHE +G +  VG  V 
Sbjct: 16  LREVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYDPVETPVVLGHEFSGTIVEVGPDVE 75

Query: 85  DLEVGDHVLPVFTGE-CGDCRHCRF-SINGEPVNHFLGTS---TFSEYTVVHSGCVAKIN 139
             +VGD V+   T   CG C +CR    N  P    +GT     F+EY +V    + ++ 
Sbjct: 76  GWKVGDRVVSETTFSTCGRCPYCRRGDYNLCPHRKGIGTQADGGFAEYVLVPEESLHELP 135

Query: 140 PLAPLDKVCI---LSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASR 196
               L+   +   L+  V     A    +    G +V VFG G +GL AA+ A++ GA+ 
Sbjct: 136 ENLSLEAAALTEPLAVAVH----AVAERSGIRPGDTVVVFGPGPIGLLAAQVAKLQGATV 191

Query: 197 II-GVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMI 254
           ++ G ++   R + AK+ G    VN  E D  + E++ E+T+G G D  +EC+G +  + 
Sbjct: 192 VVVGTEKDEVRLDVAKELGADA-VNGGEED--LAELVNEITDGDGADVVIECSGAVPALE 248

Query: 255 SAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTF 296
            A E +  G G  V VG+    A  +     +  E ++ G+ 
Sbjct: 249 QALELLRKG-GRIVQVGIFGPLAASIDVERIIQKELSVIGSR 289

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 306

>gnl|CDD|129775 TIGR00692, tdh, L-threonine 3-dehydrogenase

 Score =  127 bits (321), Expect = 5e-34
 Identities = 111/352 (31%), Positives = 164/352 (46%), Gaps = 36/352 (10%)

Query: 18  EAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDL--YFWESKGQTPL-FPRIFGHEAAG 74
           + G    + +V V  P   EV IK+  TS+C TD+  Y W+   Q+ +  P++ GHE AG
Sbjct: 6   KPGYGAELTEVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAG 65

Query: 75  VVESVGEGVSDLEVGDHVLPVFTGE----CGDCRHCRFSINGEPVNH-FLGTST---FSE 126
            V  +G GV  ++VGD+V    + E    CG C  CR        N    G  T   F+E
Sbjct: 66  EVVGIGPGVEGIKVGDYV----SVETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGCFAE 121

Query: 127 YTVVHSGCVAKINPLAPLDKVCI---LSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGL 183
           Y VV +  + K     P +   I   L   V T L      A P  G SV V G G +GL
Sbjct: 122 YAVVPAQNIWKNPKSIPPEYATIQEPLGNAVHTVL------AGPISGKSVLVTGAGPIGL 175

Query: 184 AAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDR 242
            A   A+ +GA  +I  D +  R E AKK G T  VN  + D  + + +A++T+G GVD 
Sbjct: 176 MAIAVAKASGAYPVIVSDPNEYRLELAKKMGATYVVNPFKED--VVKEVADLTDGEGVDV 233

Query: 243 SVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKP 302
            +E +G    +    + V  G  V++L G+P      +T  I+  N+   KG        
Sbjct: 234 FLEMSGAPKALEQGLQAVTPGGRVSLL-GLPPGK---VT--IDFTNKVIFKGLTIYGITG 287

Query: 303 RTDLPS---VVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIIS 351
           R    +   V  +  + +L+L+  ITH+  F +  K FE M  G+  + I+S
Sbjct: 288 RHMFETWYTVSRLIQSGKLDLDPIITHKFKFDKFEKGFELMRSGQTGKVILS 339

This protein is a tetrameric, zinc-binding, NAD-dependent enzyme of threonine catabolism. Closely related proteins include sorbitol dehydrogenase, xylitol dehydrogenase, and benzyl alcohol dehydrogenase. Eukaryotic examples of this enzyme have been demonstrated experimentally but do not appear in database search results.E. coli His-90 modulates substrate specificity and is believed part of the active site [Energy metabolism, Amino acids and amines]. Length = 340

>gnl|CDD|176247 cd08287, FDH_like_ADH3, formaldehyde dehydrogenase (FDH)-like

 Score =  125 bits (316), Expect = 5e-33
 Identities = 100/345 (28%), Positives = 145/345 (42%), Gaps = 29/345 (8%)

Query: 12  KAAVAWEAGKPLIIQDVEVAPPQAMEVR---IKIKYTSLCRTDLYFWESKGQTPL-FPRI 67
           +A V    G    I+  EV  P   E     I++  T +C +DL+ +  +G +P   P  
Sbjct: 2   RATVIHGPGD---IRVEEVPDPVIEEPTDAVIRVVATCVCGSDLWPY--RGVSPTRAPAP 56

Query: 68  FGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFS-- 125
            GHE  GVVE VG  V+ ++ GD V+  F    G C  CR       V+     +     
Sbjct: 57  IGHEFVGVVEEVGSEVTSVKPGDFVIAPFAISDGTCPFCRAGFTTSCVHGGFWGAFVDGG 116

Query: 126 --EYTVV--HSGCVAKINPLAPLDKVCI-----LSCGVSTGLGATLNVAKPERGSSVAVF 176
             EY  V    G + K+      D+  +     LS  + TG  A +  A    GS+V V 
Sbjct: 117 QGEYVRVPLADGTLVKVPGSPSDDEDLLPSLLALSDVMGTGHHAAV-SAGVRPGSTVVVV 175

Query: 177 GLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMT 236
           G GAVGL A   A+  GA RII + R   R   A++FG TD V     +  +  V  E+T
Sbjct: 176 GDGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAREFGATDIV-AERGEEAVARVR-ELT 233

Query: 237 NG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGT 295
            G G D  +EC G  ++M  A      G G    VGVP        + +   N   L G 
Sbjct: 234 GGVGADAVLECVGTQESMEQAIAIARPG-GRVGYVGVPHGGVELDVRELFFRN-VGLAG- 290

Query: 296 FFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYM 340
             G    R  LP ++D  +  ++   +     +P  E+ + +  M
Sbjct: 291 --GPAPVRRYLPELLDDVLAGRINPGRVFDLTLPLDEVAEGYRAM 333

This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 345

>gnl|CDD|176230 cd08269, Zn_ADH9, Alcohol dehydrogenases of the MDR family

 Score =  123 bits (310), Expect = 1e-32
 Identities = 81/331 (24%), Positives = 127/331 (38%), Gaps = 53/331 (16%)

Query: 28  VEVAPPQAM--EVRIKIKYTSLCRTDLYFWESKGQ----TPLFPRIFGHEAAGVVESVGE 81
            E   P     +V ++++   +C +DL  + ++G+     P  P   GHE  G V ++G 
Sbjct: 10  EEHPRPTPGPGQVLVRVEGCGVCGSDLPAF-NQGRPWFVYPAEPGGPGHEGWGRVVALGP 68

Query: 82  GVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL 141
           GV  L VGD V                          L    F+EY +  +     +  L
Sbjct: 69  GVRGLAVGDRVA------------------------GLSGGAFAEYDLADADHAVPLPSL 104

Query: 142 APLDKVCILSCGVSTGLGATLNV---AKPERGSSVAVFGLGAVGLAAAEGARIAGASRII 198
               +           LG  LNV        G +VAV G G +GL   + A  AGA R+I
Sbjct: 105 LD-GQA-----FPGEPLGCALNVFRRGWIRAGKTVAVIGAGFIGLLFLQLAAAAGARRVI 158

Query: 199 GVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAF 257
            +DR   R   A++ G T+ V        I E + E+T G G D  +E  G+   +  A 
Sbjct: 159 AIDRRPARLALARELGATEVVTDDSEA--IVERVRELTGGAGADVVIEAVGHQWPLDLAG 216

Query: 258 ECVHDGWGVAVLVGVPSKDAVFMTKPINV--LNER--TLKGTFFGNYKPRT-DLPSVVDM 312
           E V +  G  V+ G          +P+     N +   L      + +     +   V +
Sbjct: 217 ELVAER-GRLVIFGYHQDG----PRPVPFQTWNWKGIDLINAVERDPRIGLEGMREAVKL 271

Query: 313 YMNKQLELEKFITHRIPFSEINKAFEYMVKG 343
             + +L+L   +TH  P  E+  AFE   + 
Sbjct: 272 IADGRLDLGSLLTHEFPLEELGDAFEAARRR 302

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 312

>gnl|CDD|176194 cd08232, idonate-5-DH, L-idonate 5-dehydrogenase

 Score =  120 bits (304), Expect = 2e-31
 Identities = 95/356 (26%), Positives = 136/356 (38%), Gaps = 72/356 (20%)

Query: 19  AGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLF----PRIFGHEAAG 74
           A   L +++     P   EVR+++    +C +DL++++  G         P + GHE +G
Sbjct: 5   AAGDLRVEERPAPEPGPGEVRVRVAAGGICGSDLHYYQ-HGGFGTVRLREPMVLGHEVSG 63

Query: 75  VVESVGEGVSDLEVGDHV-----LPVFTGECGDCRHCRFSINGEPVNH-----FLGTST- 123
           VVE+VG GV+ L  G  V      P     CG C +CR    G P N      FLG++  
Sbjct: 64  VVEAVGPGVTGLAPGQRVAVNPSRP-----CGTCDYCR---AGRP-NLCLNMRFLGSAMR 114

Query: 124 -------FSEYTVVH-SGCVAKINPLAPLDKVCILSCGVSTGLGA----------TLNVA 165
                  F EY VV  S CV              L  G+S    A           +N A
Sbjct: 115 FPHVQGGFREYLVVDASQCVP-------------LPDGLSLRRAALAEPLAVALHAVNRA 161

Query: 166 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHD 225
               G  V V G G +G      AR AGA+ I+  D +      A+  G  + VN +   
Sbjct: 162 GDLAGKRVLVTGAGPIGALVVAAARRAGAAEIVATDLADAPLAVARAMGADETVNLARDP 221

Query: 226 RPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN 285
                       G  D   E +G    + SA   V  G G  V VG+          P+N
Sbjct: 222 ----LAAYAADKGDFDVVFEASGAPAALASALRVVRPG-GTVVQVGMLGGPVPL---PLN 273

Query: 286 VL--NERTLKGTF-FGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFE 338
            L   E  L+G+F F       +    V +    ++++   IT   P  E  +AF 
Sbjct: 274 ALVAKELDLRGSFRFD-----DEFAEAVRLLAAGRIDVRPLITAVFPLEEAAEAFA 324

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339

>gnl|CDD|223677 COG0604, Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

 Score =  118 bits (298), Expect = 1e-30
 Identities = 87/341 (25%), Positives = 137/341 (40%), Gaps = 36/341 (10%)

Query: 12  KAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL-FPRIF 68
           KA V  E G P  L + +V    P   EV +++K   +   D+   +         P I 
Sbjct: 2   KAVVVEEFGGPEVLKVVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLAPPVRPLPFIP 61

Query: 69  GHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYT 128
           G EAAGVV +VG GV+  +VGD V                  +G           ++EY 
Sbjct: 62  GSEAAGVVVAVGSGVTGFKVGDRV----------AALGGVGRDG----------GYAEYV 101

Query: 129 VVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFG-LGAVGLAAAE 187
           VV +  +  +      ++   L     T   A  + A  + G +V V G  G VG AA +
Sbjct: 102 VVPADWLVPLPDGLSFEEAAALPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQ 161

Query: 188 GARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVEC 246
            A+  GA+ +  V  S K  E  K+ G    +N  E D    E + E+T G GVD  ++ 
Sbjct: 162 LAKALGATVVAVVSSSEKL-ELLKELGADHVINYREED--FVEQVRELTGGKGVDVVLDT 218

Query: 247 TGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNER-TLKGTFFGNYKPRTD 305
            G  D   ++   +  G G  V +G  S         + +L +R TL+G   G+  P   
Sbjct: 219 VG-GDTFAASLAALAPG-GRLVSIGALSGGPPVPLNLLPLLGKRLTLRGVTLGSRDPEAL 276

Query: 306 LP---SVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKG 343
                 + D+  + +L+    I    P +E   A  +++  
Sbjct: 277 AEALAELFDLLASGKLKPV--IDRVYPLAEAPAAAAHLLLE 315

Length = 326

>gnl|CDD|176242 cd08282, PFDH_like, Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH)

 Score =  119 bits (300), Expect = 1e-30
 Identities = 76/252 (30%), Positives = 111/252 (44%), Gaps = 56/252 (22%)

Query: 40  IKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTG 98
           ++I  T++C +DL+ +   G+T      + GHEA G VE VG  V  L+VGD V+  F  
Sbjct: 30  VRITTTAICGSDLHMYR--GRTGAEPGLVLGHEAMGEVEEVGSAVESLKVGDRVVVPFNV 87

Query: 99  ECGDCRHCR-------FSINGEPVNHFLGTSTF-------SEYTVVHSGCVAKINPLAPL 144
            CG CR+C+        ++N        G           +EY  V         P A  
Sbjct: 88  ACGRCRNCKRGLTGVCLTVNPGRAGGAYGYVDMGPYGGGQAEYLRV---------PYA-- 136

Query: 145 DKVCI----------------LSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEG 188
           D   +                LS    TG      +A  + G +VAVFG G VGL AA  
Sbjct: 137 DFNLLKLPDRDGAKEKDDYLMLSDIFPTGWHGL-ELAGVQPGDTVAVFGAGPVGLMAAYS 195

Query: 189 ARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG 248
           A + GASR+  VD   +R + A+  G    ++ S+ D P+++ I  +  GGVDR+V+C G
Sbjct: 196 AILRGASRVYVVDHVPERLDLAESIGAIP-IDFSDGD-PVEQ-ILGLEPGGVDRAVDCVG 252

Query: 249 NIDNMISAFECV 260
                   +E  
Sbjct: 253 --------YEAR 256

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 375

>gnl|CDD|176226 cd08265, Zn_ADH3, Alcohol dehydrogenases of the MDR family

 Score =  118 bits (298), Expect = 3e-30
 Identities = 102/360 (28%), Positives = 153/360 (42%), Gaps = 52/360 (14%)

Query: 16  AWEAGK-----PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESK--------GQTP 62
                K      L ++DV V   +  E+ I++K   +C +D++ +E+         G T 
Sbjct: 27  TNLGSKVWRYPELRVEDVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTE 86

Query: 63  LFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNH----- 117
            FP + GHE +GVVE  G+ V + E GD V       CG CR CR   +G P NH     
Sbjct: 87  -FPVVIGHEFSGVVEKTGKNVKNFEKGDPVTAEEMMWCGMCRACR---SGSP-NHCKNLK 141

Query: 118 ---FLGTSTFSEYTVVHSGCVAKINPLAPL---DK---VCILSCGVSTGLGATLNVA--- 165
              F     F+EY  V++    +IN L  +   DK      L    S             
Sbjct: 142 ELGFSADGAFAEYIAVNARYAWEINELREIYSEDKAFEAGALVEPTSVAYNGLFIRGGGF 201

Query: 166 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE-H 224
           +P  G+ V V+G G +GLAA   A+ AGAS++I  + S +R   AK+ G     N ++  
Sbjct: 202 RP--GAYVVVYGAGPIGLAAIALAKAAGASKVIAFEISEERRNLAKEMGADYVFNPTKMR 259

Query: 225 DRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVG-----VPSKDAV 278
           D    E + E+T G G D  VE  G     I   E      G  V +G     VP    V
Sbjct: 260 DCLSGEKVMEVTKGWGADIQVEAAGAPPATIPQMEKSIAINGKIVYIGRAATTVPLHLEV 319

Query: 279 FMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFE 338
              +   ++  +   G   G +      PSV+ +  + ++++ K IT R P   I +A +
Sbjct: 320 LQVRRAQIVGAQGHSG--HGIF------PSVIKLMASGKIDMTKIITARFPLEGIMEAIK 371

This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 384

>gnl|CDD|176258 cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CAD)

 Score =  108 bits (273), Expect = 4e-27
 Identities = 72/230 (31%), Positives = 101/230 (43%), Gaps = 22/230 (9%)

Query: 12  KAAVAWEAGK----PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRI 67
           KA V  + G     PL + +V V  P   EV IK++   +CRTDL+  E     P  P I
Sbjct: 2   KAMVLEKPGPIEENPLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLPPPKLPLI 61

Query: 68  FGHEAAGVVESVGEGVSDLEVGDHV-LPVFTGECGDCRHCR---------FSINGEPVNH 117
            GHE  G VE+VG GV+   VGD V +P     CG+CR+CR             G  V+ 
Sbjct: 62  PGHEIVGRVEAVGPGVTRFSVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFTGYTVD- 120

Query: 118 FLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFG 177
                 ++EY V        I      ++   L C    G  A L +A  + G  + ++G
Sbjct: 121 ----GGYAEYMVADERFAYPIPEDYDDEEAAPLLCAGIIGYRA-LKLAGLKPGQRLGLYG 175

Query: 178 LGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRP 227
            GA    A + AR  GA  +    RS +  E A++ G  D+   S+   P
Sbjct: 176 FGASAHLALQIARYQGA-EVFAFTRSGEHQELARELG-ADWAGDSDDLPP 223

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 329

>gnl|CDD|176186 cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)

 Score =  108 bits (273), Expect = 5e-27
 Identities = 90/373 (24%), Positives = 138/373 (36%), Gaps = 86/373 (23%)

Query: 12  KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHE 71
           K   A +A   L     E  P    +V IKI Y  +C +DL+   ++     +P + GHE
Sbjct: 1   KGYAARDASGKLEPFTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWGPTKYPLVPGHE 60

Query: 72  AAGVVESVGEGVSDLEVGDHV-LPVFTGECGDCRHCR-----------FSINGEPVNHFL 119
             G+V +VG  V+  +VGD V +      CG C  C+            + NG+  +  +
Sbjct: 61  IVGIVVAVGSKVTKFKVGDRVGVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKYPDGTI 120

Query: 120 GTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATL------NVAKPERGSSV 173
               ++++ VV    V KI           L C      G T+      N   P  G  V
Sbjct: 121 TQGGYADHIVVDERFVFKIPEGLDSAAAAPLLCA-----GITVYSPLKRNGVGP--GKRV 173

Query: 174 AVFGLG-----AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPI 228
            V G+G     AV  A A GA       +    RS  + E+A K G  +F+ T + +   
Sbjct: 174 GVVGIGGLGHLAVKFAKALGA------EVTAFSRSPSKKEDALKLGADEFIATKDPE--- 224

Query: 229 QEVIAEMTNGGVDRSVECTGNIDNMISAFECV---HDGW----------GVAVLVGVPSK 275
                 M         +  G++D +I     V   HD            G  VLVG P +
Sbjct: 225 -----AMK--------KAAGSLDLIID---TVSASHD-LDPYLSLLKPGGTLVLVGAPEE 267

Query: 276 DAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLEL--EKFITHRI---PF 330
                  P+ +   +++ G+  G  K              + L+   E  I   +   P 
Sbjct: 268 PLPVPPFPL-IFGRKSVAGSLIGGRK-----------ETQEMLDFAAEHGIKPWVEVIPM 315

Query: 331 SEINKAFEYMVKG 343
             IN+A E + KG
Sbjct: 316 DGINEALERLEKG 328

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|215721 pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase

 Score =  103 bits (258), Expect = 5e-27
 Identities = 44/134 (32%), Positives = 66/134 (49%), Gaps = 5/134 (3%)

Query: 180 AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG- 238
            VGLAA + A+  GA+R+I VDRS ++ E AK+ G    +N  + D    E + E+T G 
Sbjct: 1   GVGLAAVQLAKALGAARVIAVDRSEEKLELAKELGADHVINYRDED--FVERVRELTGGR 58

Query: 239 GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFG 298
           GVD  ++C G    +  A E +  G G  V+VG+P    V       +L E T+ G+  G
Sbjct: 59  GVDVVIDCVGAPATLEQALELLRPG-GRVVVVGLPGGAPVPFPLRDLLLKELTILGSLGG 117

Query: 299 NYK-PRTDLPSVVD 311
             +     L  +  
Sbjct: 118 GREEFEEALELLAS 131

Length = 131

>gnl|CDD|219758 pfam08240, ADH_N, Alcohol dehydrogenase GroES-like domain

 Score =  101 bits (254), Expect = 1e-26
 Identities = 39/109 (35%), Positives = 55/109 (50%), Gaps = 10/109 (9%)

Query: 37  EVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVF 96
           EV +++K   +C +DL+ +  +      P I GHE AG+VE VG GV+ L+VGD V+   
Sbjct: 3   EVLVRVKAAGICGSDLHIYRGEPPPVKLPLILGHEGAGIVEEVGPGVTGLKVGDRVVVYP 62

Query: 97  TGECGDCRHCRFSINGE----PVNHFLGTS---TFSEYTVVHSGCVAKI 138
              CG C  CR    G     P   FLG      F+EY VV +  +  +
Sbjct: 63  LIPCGKCAACR---EGRENLCPNGKFLGVHLDGGFAEYVVVPARNLVPL 108

This is the catalytic domain of alcohol dehydrogenases. Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure. Length = 108

>gnl|CDD|176217 cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like, 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

 Score =  104 bits (262), Expect = 5e-26
 Identities = 74/287 (25%), Positives = 111/287 (38%), Gaps = 53/287 (18%)

Query: 63  LFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTS 122
             P   G+ + G V  VG GV+  + GD V               F        H     
Sbjct: 19  PLPLPPGYSSVGRVVEVGSGVTGFKPGDRV---------------FCFGP----H----- 54

Query: 123 TFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGAT-LN---VAKPERGSSVAVFGL 178
             +E  VV +  +  +    P +          T L AT LN    A+P  G  VAV GL
Sbjct: 55  --AERVVVPANLLVPLPDGLPPE------RAALTALAATALNGVRDAEPRLGERVAVVGL 106

Query: 179 GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG 238
           G VGL AA+ A+ AGA  ++GVD  + R E A+  G  D V          +   E+   
Sbjct: 107 GLVGLLAAQLAKAAGAREVVGVDPDAARRELAEALGPADPVA--------ADTADEIGGR 158

Query: 239 GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGT--- 295
           G D  +E +G+   + +A   + D  G  VLVG      + + +  +      ++ +   
Sbjct: 159 GADVVIEASGSPSALETALRLLRDR-GRVVLVGWYGLKPLLLGEEFH-FKRLPIRSSQVY 216

Query: 296 FFGNYKPRTDLPSVVDMYMNKQL----ELEKFITHRIPFSEINKAFE 338
             G Y          ++     L     LE  ITHR+PF +  +A+ 
Sbjct: 217 GIGRYDRPRRWTEARNLEEALDLLAEGRLEALITHRVPFEDAPEAYR 263

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 277

>gnl|CDD|176256 cd08296, CAD_like, Cinnamyl alcohol dehydrogenases (CAD)

 Score =  105 bits (265), Expect = 6e-26
 Identities = 71/225 (31%), Positives = 110/225 (48%), Gaps = 19/225 (8%)

Query: 12  KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHE 71
           KA    E G PL + + +V  P   EV IK++   +C +D +  E       +PR+ GHE
Sbjct: 2   KAVQVTEPGGPLELVERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAMPGLSYPRVPGHE 61

Query: 72  AAGVVESVGEGVSDLEVGDHV-LPVFTGECGDCRHCRFSINGEPVN---------HFLGT 121
             G +++VGEGVS  +VGD V +    G CG C  CR    G+ V+            G 
Sbjct: 62  VVGRIDAVGEGVSRWKVGDRVGVGWHGGHCGTCDACR---RGDFVHCENGKVTGVTRDG- 117

Query: 122 STFSEYTVVHSGCVAKINP-LAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGA 180
             ++EY +  +  +A+I   L   +   +L  GV+T      + AKP  G  VAV G+G 
Sbjct: 118 -GYAEYMLAPAEALARIPDDLDAAEAAPLLCAGVTTFNALRNSGAKP--GDLVAVQGIGG 174

Query: 181 VGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHD 225
           +G  A + A   G  R + + R S + + A+K G   +++TS+ D
Sbjct: 175 LGHLAVQYAAKMGF-RTVAISRGSDKADLARKLGAHHYIDTSKED 218

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADHs), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 333

>gnl|CDD|176191 cd05289, MDR_like_2, alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

 Score =  102 bits (257), Expect = 5e-25
 Identities = 70/340 (20%), Positives = 124/340 (36%), Gaps = 48/340 (14%)

Query: 12  KAAVAWEAGKPLIIQDVEVAPPQAM--EVRIKIKYTSLCRTDLYFWESKGQTPL---FPR 66
           KA    E G P +++  +V  P+    EV +K+    +   DL   E   +       P 
Sbjct: 2   KAVRIHEYGGPEVLELADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPL 61

Query: 67  IFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSE 126
           I GH+ AGVV +VG GV+  +VGD V                         F     ++E
Sbjct: 62  IPGHDVAGVVVAVGPGVTGFKVGDEVF------------GMTP--------FTRGGAYAE 101

Query: 127 YTVVHSGCVAKINP--LAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFG-LGAVGL 183
           Y VV +  +A   P  L+  +   +   G+ T   A   +   + G +V + G  G VG 
Sbjct: 102 YVVVPADELALK-PANLSFEEAAALPLAGL-TAWQALFELGGLKAGQTVLIHGAAGGVGS 159

Query: 184 AAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRS 243
            A + A+  GA R+I    ++   +  +  G  + ++ ++      +       GGVD  
Sbjct: 160 FAVQLAKARGA-RVIATASAANA-DFLRSLGADEVIDYTK-----GDFERAAAPGGVDAV 212

Query: 244 VECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPR 303
           ++  G  + +  +   V  G     LV +                 R ++  F       
Sbjct: 213 LDTVGG-ETLARSLALVKPG---GRLVSIAG-----PPPAEQAAKRRGVRAGFVFVEPDG 263

Query: 304 TDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKG 343
             L  + ++    +L     +    P  +  +A E +  G
Sbjct: 264 EQLAELAELVEAGKLRP--VVDRVFPLEDAAEAHERLESG 301

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 309

>gnl|CDD|176211 cd08249, enoyl_reductase_like, enoyl_reductase_like

 Score =  101 bits (255), Expect = 2e-24
 Identities = 88/355 (24%), Positives = 137/355 (38%), Gaps = 49/355 (13%)

Query: 12  KAAVAWEA-GKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESK--GQTPLFPRIF 68
           KAAV     G  L++ DV V  P   EV +K+K  +L   D   W+ +  G  P +P I 
Sbjct: 2   KAAVLTGPGGGLLVVVDVPVPKPGPDEVLVKVKAVALNPVD---WKHQDYGFIPSYPAIL 58

Query: 69  GHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYT 128
           G + AG V  VG GV+  +VGD V        G       +              F EY 
Sbjct: 59  GCDFAGTVVEVGSGVTRFKVGDRV-------AGFVHGGNPNDPRN--------GAFQEYV 103

Query: 129 VVHSGCVAKINPLAPLDKVCILSCGVST---GLGATLNVAKP-------ERGSSVAVFGL 178
           V  +   AKI      ++   L  G+ T    L   L +  P        +G  V ++G 
Sbjct: 104 VADADLTAKIPDNISFEEAATLPVGLVTAALALFQKLGLPLPPPKPSPASKGKPVLIWG- 162

Query: 179 G--AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMT 236
           G  +VG  A + A++AG  ++I    S K F+  K  G     +   HD  + E I   T
Sbjct: 163 GSSSVGTLAIQLAKLAGY-KVITT-ASPKNFDLVKSLGADAVFDY--HDPDVVEDIRAAT 218

Query: 237 NGGVDRSVECTGNIDNMISAFECVHDGWG--VAVLVGVPSKDAVFMTKPINVLNERTLKG 294
            G +  +++C    ++     E +    G  +  L+ VP +          V  +  L  
Sbjct: 219 GGKLRYALDCISTPESAQLCAEALGRSGGGKLVSLLPVPEETE----PRKGVKVKFVLGY 274

Query: 295 TFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIP-----FSEINKAFEYMVKGE 344
           T FG      +   V   Y+ + LE  K   H +         + +  + + KG+
Sbjct: 275 TVFGEIPEDREFGEVFWKYLPELLEEGKLKPHPVRVVEGGLEGVQEGLDLLRKGK 329

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 339

>gnl|CDD|176229 cd08268, MDR2, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  100 bits (252), Expect = 4e-24
 Identities = 71/238 (29%), Positives = 106/238 (44%), Gaps = 32/238 (13%)

Query: 12  KAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWE-SKGQTPLFPRIF 68
           +A    + G P  L I+++ V  P A EV I+++   L R D  F   +  + P  P   
Sbjct: 2   RAVRFHQFGGPEVLRIEELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIEPPPLPARL 61

Query: 69  GHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTS-TFSEY 127
           G+EAAGVVE+VG GV+   VGD V  +                       LG   T++EY
Sbjct: 62  GYEAAGVVEAVGAGVTGFAVGDRVSVIPA-------------------ADLGQYGTYAEY 102

Query: 128 TVVHSGCVAKINPLAPLDKVCILSCGVS--TGLGATLNVAKPERGSSVAVFGL-GAVGLA 184
            +V +  V K+     L  V   +  +   T  GA + +A    G SV +     +VGLA
Sbjct: 103 ALVPAAAVVKLPDG--LSFVEAAALWMQYLTAYGALVELAGLRPGDSVLITAASSSVGLA 160

Query: 185 AAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVD 241
           A + A  AGA  +I   R+S++ +     G    + T E D  +   +  +T G GVD
Sbjct: 161 AIQIANAAGA-TVIATTRTSEKRDALLALGAAHVIVTDEED--LVAEVLRITGGKGVD 215

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 328

>gnl|CDD|215378 PLN02702, PLN02702, L-idonate 5-dehydrogenase

 Score =  101 bits (252), Expect = 4e-24
 Identities = 100/350 (28%), Positives = 154/350 (44%), Gaps = 38/350 (10%)

Query: 16  AWEAGK-PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLF----PRIFGH 70
           AW  G   L IQ  ++ P    +VR+++K   +C +D+++ ++  +   F    P + GH
Sbjct: 21  AWLVGVNTLKIQPFKLPPLGPHDVRVRMKAVGICGSDVHYLKTM-RCADFVVKEPMVIGH 79

Query: 71  EAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRF-SINGEPVNHFLGTSTFS---E 126
           E AG++E VG  V  L VGD V       C  C  C+    N  P   F  T        
Sbjct: 80  ECAGIIEEVGSEVKHLVVGDRVALEPGISCWRCNLCKEGRYNLCPEMKFFATPPVHGSLA 139

Query: 127 YTVVHSGCVAKINPLAPLDKVCI--------LSCGVSTGLGATLNVAKPERGSSVAVFGL 178
             VVH   +    P    + V +        LS GV     A +    PE  ++V V G 
Sbjct: 140 NQVVHPADLCFKLP----ENVSLEEGAMCEPLSVGVHACRRANIG---PE--TNVLVMGA 190

Query: 179 GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTN- 237
           G +GL     AR  GA RI+ VD   +R   AK+ G  + V  S +   ++  + E+   
Sbjct: 191 GPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQLGADEIVLVSTNIEDVESEVEEIQKA 250

Query: 238 --GGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGT 295
             GG+D S +C G    M +A E    G G   LVG+   +   MT P+     R +   
Sbjct: 251 MGGGIDVSFDCVGFNKTMSTALEATRAG-GKVCLVGMGHNE---MTVPLTPAAAREVD-- 304

Query: 296 FFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFS--EINKAFEYMVKG 343
             G ++ R   P  ++   + +++++  ITHR  FS  E+ +AFE   +G
Sbjct: 305 VVGVFRYRNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARG 354

Length = 364

>gnl|CDD|176227 cd08266, Zn_ADH_like1, Alcohol dehydrogenases of the MDR family

 Score = 99.3 bits (248), Expect = 2e-23
 Identities = 85/350 (24%), Positives = 144/350 (41%), Gaps = 35/350 (10%)

Query: 12  KAAVAWEAGKPLIIQDVEVAPPQAM--EVRIKIKYTSLCRTDLYFWESK-GQTPLFPRIF 68
           KA V    G P +++  ++  P+    EV +++K  +L   DL+      G     P I 
Sbjct: 2   KAVVIRGHGGPEVLEYGDLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGIKLPLPHIL 61

Query: 69  GHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCR---------FSINGEPVNHFL 119
           G + AGVVE+VG GV++++ G  V+      CG C +C          + I GE   H  
Sbjct: 62  GSDGAGVVEAVGPGVTNVKPGQRVVIYPGISCGRCEYCLAGRENLCAQYGILGE---HVD 118

Query: 120 GTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLG 179
           G   ++EY  V +  +  I      ++         T     +  A+   G +V V G G
Sbjct: 119 G--GYAEYVAVPARNLLPIPDNLSFEEAAAAPLTFLTAWHMLVTRARLRPGETVLVHGAG 176

Query: 180 A-VGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG 238
           + VG AA + A++ GA  +I    S  + E AK+ G  D+V     +  ++EV       
Sbjct: 177 SGVGSAAIQIAKLFGA-TVIATAGSEDKLERAKELG-ADYVIDYRKEDFVREVRELTGKR 234

Query: 239 GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV----LNERTLKG 294
           GVD  VE  G       + + +  G G  V  G  +        PI++      + ++ G
Sbjct: 235 GVDVVVEHVGA-ATWEKSLKSLARG-GRLVTCGATTGYEA----PIDLRHVFWRQLSILG 288

Query: 295 TFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGE 344
           +  G    + +L     + +  + +L+  I    P  E  +A   +   E
Sbjct: 289 STMGT---KAELDEA--LRLVFRGKLKPVIDSVFPLEEAAEAHRRLESRE 333

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 342

>gnl|CDD|184316 PRK13771, PRK13771, putative alcohol dehydrogenase; Provisional

 Score = 98.2 bits (245), Expect = 3e-23
 Identities = 71/251 (28%), Positives = 102/251 (40%), Gaps = 32/251 (12%)

Query: 12  KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHE 71
           KA +     +   I++V    P   EV IK+ Y  LC  DL   +       +P I GHE
Sbjct: 2   KAVILPGFKQGYRIEEVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYPRMKYPVILGHE 61

Query: 72  AAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRFS---------INGEPVNHFLGTS 122
             G VE VGE V   + GD V  +     G C +CR             GE ++ F    
Sbjct: 62  VVGTVEEVGENVKGFKPGDRVASLLYAPDGTCEYCRSGEEAYCKNRLGYGEELDGF---- 117

Query: 123 TFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAV 181
            F+EY  V    + K+ P    +   I+ C         L  A  ++G +V V G  G V
Sbjct: 118 -FAEYAKVKVTSLVKVPPNVSDEGAVIVPCVTGMVYRG-LRRAGVKKGETVLVTGAGGGV 175

Query: 182 GLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT----SEHDRPIQEVIAEMTN 237
           G+ A + A+  GA ++I V  S  + +   K+   D+V      SE  + I         
Sbjct: 176 GIHAIQVAKALGA-KVIAVTSSESKAKIVSKYA--DYVIVGSKFSEEVKKI--------- 223

Query: 238 GGVDRSVECTG 248
           GG D  +E  G
Sbjct: 224 GGADIVIETVG 234

Length = 334

>gnl|CDD|182229 PRK10083, PRK10083, putative oxidoreductase; Provisional

 Score = 96.0 bits (239), Expect = 2e-22
 Identities = 87/333 (26%), Positives = 141/333 (42%), Gaps = 40/333 (12%)

Query: 23  LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEG 82
           L I++  +  P A EVR+K+K   +C +D + +        +PR+ GHE  GV+++VGEG
Sbjct: 12  LAIEERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHNPFAKYPRVIGHEFFGVIDAVGEG 71

Query: 83  VSDLEVGDHVL--PVFTGECGDCRHCRFSINGEPVN-----HFLGT---STFSEYTVVHS 132
           V    +G+ V   PV +  CG C  C     G+P N       LG      FSEY VV +
Sbjct: 72  VDAARIGERVAVDPVIS--CGHCYPCSI---GKP-NVCTSLVVLGVHRDGGFSEYAVVPA 125

Query: 133 GCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEG-ARI 191
               +I P A  D+  ++    +     T     P       ++G G VGL   +    +
Sbjct: 126 KNAHRI-PDAIADQYAVMVEPFTIAANVTGRT-GPTEQDVALIYGAGPVGLTIVQVLKGV 183

Query: 192 AGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNID 251
                +I  DR  +R   AK+ G    +N ++   P+ E + E       + ++ T  ID
Sbjct: 184 YNVKAVIVADRIDERLALAKESGADWVINNAQE--PLGEALEE-------KGIKPTLIID 234

Query: 252 NMISAFECVHDGWGVAVLVGVPSKDAVFM---TKPINVLNERTLKGTFFGNYKPRTD--- 305
                  C       AV +  P+   V M   ++P  ++ ++ + G     +  R +   
Sbjct: 235 AA-----CHPSILEEAVTLASPAARIVLMGFSSEPSEIV-QQGITGKELSIFSSRLNANK 288

Query: 306 LPSVVDMYMNKQLELEKFITHRIPFSEINKAFE 338
            P V+D      ++ EK ITH   F  +  A E
Sbjct: 289 FPVVIDWLSKGLIDPEKLITHTFDFQHVADAIE 321

Length = 339

>gnl|CDD|176237 cd08276, MDR7, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 93.4 bits (233), Expect = 2e-21
 Identities = 90/332 (27%), Positives = 135/332 (40%), Gaps = 37/332 (11%)

Query: 23  LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL---FPRIFGHEAAGVVESV 79
           L + +  V  P   EV +++   SL   DL      G+ P     P I   + AG V +V
Sbjct: 15  LKLVEEPVPEPGPGEVLVRVHAVSLNYRDLLI--LNGRYPPPVKDPLIPLSDGAGEVVAV 72

Query: 80  GEGVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTS---TFSEYTVVHSGCVA 136
           GEGV+  +VGD V+P F                E     LG       +EY V+    + 
Sbjct: 73  GEGVTRFKVGDRVVPTF-----FPNWLDGPPTAEDEASALGGPIDGVLAEYVVLPEEGLV 127

Query: 137 KINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASR 196
           +       ++   L C   T   A   +   + G +V V G G V L A + A+ AGA R
Sbjct: 128 RAPDHLSFEEAATLPCAGLTAWNALFGLGPLKPGDTVLVQGTGGVSLFALQFAKAAGA-R 186

Query: 197 IIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMIS 255
           +I    S ++ E AK  G    +N        +EV+ ++T G GVD  VE  G    +  
Sbjct: 187 VIATSSSDEKLERAKALGADHVINYRTTPDWGEEVL-KLTGGRGVDHVVE-VGGPGTLAQ 244

Query: 256 AFECVHDGWGVAVLVGVPSKDAVFMTKPINVL----NERTLKGTFFGNYKPRTDLPSVVD 311
           + + V  G GV  L+G  S        P+ +L       TL+G   G+   R    +   
Sbjct: 245 SIKAVAPG-GVISLIGFLSGFEA----PVLLLPLLTKGATLRGIAVGS---RAQFEA--- 293

Query: 312 MYMNKQLELEKF---ITHRIPFSEINKAFEYM 340
             MN+ +E  +    I    PF E  +A+ Y+
Sbjct: 294 --MNRAIEAHRIRPVIDRVFPFEEAKEAYRYL 323

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 336

>gnl|CDD|132409 TIGR03366, HpnZ_proposed, putative phosphonate catabolism associated alcohol dehydrogenase

 Score = 90.6 bits (225), Expect = 8e-21
 Identities = 72/267 (26%), Positives = 111/267 (41%), Gaps = 33/267 (12%)

Query: 67  IFGHEAAGVVESVGEGVSD------LEVGDHVLPVFTGECGDCRHCRFSINGEPVN---- 116
           + GHE  G V ++  G +       L +G  V+   T  CG C  CR  +  +  +    
Sbjct: 1   VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKY 60

Query: 117 -------HFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCI-LSCGVSTGLGATLNVAKPE 168
                   +  +  ++E+  + +G      P    D V     C  +T + A L  A   
Sbjct: 61  GHEALDSGWPLSGGYAEHCHLPAGTAIVPVPDDLPDAVAAPAGCATATVM-AALEAAGDL 119

Query: 169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPI 228
           +G  V V G G +GL AA  A  AGA+R++  D S  R E A  FG T     +E +   
Sbjct: 120 KGRRVLVVGAGMLGLTAAAAAAAAGAARVVAADPSPDRRELALSFGATA---LAEPEVLA 176

Query: 229 QEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLN 288
           +         GVD ++E +G    + +  E +  G G AVL G     +VF   P+ +  
Sbjct: 177 ERQGGLQNGRGVDVALEFSGATAAVRACLESLDVG-GTAVLAG-----SVFPGGPVALDP 230

Query: 289 ERTLKG--TFFG--NYKPRTDLPSVVD 311
           E+ ++   T  G  NY+PR  L   V 
Sbjct: 231 EQVVRRWLTIRGVHNYEPR-HLDQAVR 256

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds. Length = 280

>gnl|CDD|182371 PRK10309, PRK10309, galactitol-1-phosphate dehydrogenase; Provisional

 Score = 88.7 bits (220), Expect = 8e-20
 Identities = 83/312 (26%), Positives = 134/312 (42%), Gaps = 39/312 (12%)

Query: 37  EVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHV---- 92
           +V +K+  + LC +D+      G    +P   GHE +G VE+VG GV DL  GD V    
Sbjct: 27  DVLVKVASSGLCGSDIPRIFKNG-AHYYPITLGHEFSGYVEAVGSGVDDLHPGDAVACVP 85

Query: 93  -LPVFTGECGDCRHCRFSINGEPVNHFLGTSTF---SEYTVVHSGCVAKINPLAPLDKVC 148
            LP FT  C +C    +S+  +    F+G+      +EY VV    +  +    P++   
Sbjct: 86  LLPCFT--CPECLRGFYSLCAK--YDFIGSRRDGGNAEYIVVKRKNLFALPTDMPIEDGA 141

Query: 149 ILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFE 208
            +   ++ GL A  ++A+   G +V + G G +GL A + A   GA  +  +D +S++  
Sbjct: 142 FIE-PITVGLHA-FHLAQGCEGKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDINSEKLA 199

Query: 209 EAKKFGVTDFVNTSEHDRP-IQEVIAE-------MTNGGVDRSVECTGNIDNMISAFECV 260
            AK  G     N+ E   P IQ V+ E       +   GV ++VE    I    +     
Sbjct: 200 LAKSLGAMQTFNSREMSAPQIQSVLRELRFDQLILETAGVPQTVELAIEIAGPRAQL--- 256

Query: 261 HDGWGVAVLVGVPSKDAVFMTKPINVL--NERTLKGTFFGNYK---PRTDLPSVVDMYMN 315
                   LVG    D    +     +   E T+ G++  NY    P  +  +   +   
Sbjct: 257 -------ALVGTLHHDLHLTSATFGKILRKELTVIGSWM-NYSSPWPGQEWETASRLLTE 308

Query: 316 KQLELEKFITHR 327
           ++L LE  I HR
Sbjct: 309 RKLSLEPLIAHR 320

Length = 347

>gnl|CDD|176218 cd08256, Zn_ADH2, Alcohol dehydrogenases of the MDR family

 Score = 88.6 bits (220), Expect = 1e-19
 Identities = 88/354 (24%), Positives = 143/354 (40%), Gaps = 56/354 (15%)

Query: 25  IQDVEVAPPQAMEVRIKIKYTSLCRTDL-------YFWESKGQTPLF--PRIFGHEAAGV 75
           +++V V  P   E+ +K++   +C  D+        FW  + Q P    P I GHE  G 
Sbjct: 14  LEEVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGR 73

Query: 76  VESVGEGVSD--LEVGDHVLPVFTGECGDCRHCR---------FSINGEPVNHFLGTSTF 124
           V  +GEG  +  ++VGD V+      C +CR C            + G   N   G + +
Sbjct: 74  VVELGEGAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDLYGFQNNVNGGMAEY 133

Query: 125 SEYT---VVHSGCVAKINPLAPLDKVCI---LSCGVSTGLGATLNVAKPERGSSVAVFGL 178
             +    +VH     K+    P +   +   L+C +       ++ A  +    V + G 
Sbjct: 134 MRFPKEAIVH-----KVPDDIPPEDAILIEPLACALHA-----VDRANIKFDDVVVLAGA 183

Query: 179 GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG 238
           G +GL     AR+    ++I +D   +R   A+KFG    +N  E D  + E I E+T G
Sbjct: 184 GPLGLGMIGAARLKNPKKLIVLDLKDERLALARKFGADVVLNPPEVD--VVEKIKELTGG 241

Query: 239 -GVDRSVECTGNID------NMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERT 291
            G D  +E TG+        NMI          G  V   V           I    E  
Sbjct: 242 YGCDIYIEATGHPSAVEQGLNMIRKL-------GRFVEFSVFGDPVTVDWSIIGDRKELD 294

Query: 292 LKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG 345
           + G+  G Y      P  +D+  + +L  +  +TH+ P  +  +AFE M +G+ 
Sbjct: 295 VLGSHLGPYC----YPIAIDLIASGRLPTDGIVTHQFPLEDFEEAFELMARGDD 344

This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 350

>gnl|CDD|176215 cd08253, zeta_crystallin, Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

 Score = 87.6 bits (218), Expect = 1e-19
 Identities = 89/361 (24%), Positives = 131/361 (36%), Gaps = 62/361 (17%)

Query: 12  KAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFG 69
           +A    E G P  L + D+ V  P   EV +++  + +   D Y                
Sbjct: 2   RAIRYHEFGAPDVLRLGDLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPGLPPLPYVP 61

Query: 70  H-EAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYT 128
             + AGVVE+VGEGV  L+VGD    V+    G  R                  T +EY 
Sbjct: 62  GSDGAGVVEAVGEGVDGLKVGD---RVWLTNLGWGRR---------------QGTAAEYV 103

Query: 129 VVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNV------------AKPERGSSVAVF 176
           VV            P D++  L  GVS   GA L +            A  + G +V V 
Sbjct: 104 VV------------PADQLVPLPDGVSFEQGAALGIPALTAYRALFHRAGAKAGETVLVH 151

Query: 177 G-LGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEM 235
           G  GAVG AA + AR AGA R+I    S++  E  ++ G     N    D  + + I   
Sbjct: 152 GGSGAVGHAAVQLARWAGA-RVIATASSAEGAELVRQAGADAVFNYRAED--LADRILAA 208

Query: 236 TNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKG 294
           T G GVD  +E   N  N+    + +  G  + V      +  +    PIN L  +    
Sbjct: 209 TAGQGVDVIIEVLAN-VNLAKDLDVLAPGGRIVVYGSGGLRGTI----PINPLMAKEASI 263

Query: 295 TFFGNYKPRTD-----LPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCI 349
                Y    +       ++     +  L     I    P  E   A E +  G  +  +
Sbjct: 264 RGVLLYTATPEERAAAAEAIAAGLADGALRPV--IAREYPLEEAAAAHEAVESGGAIGKV 321

Query: 350 I 350
           +
Sbjct: 322 V 322

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176228 cd08267, MDR1, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 86.9 bits (216), Expect = 2e-19
 Identities = 77/343 (22%), Positives = 125/343 (36%), Gaps = 45/343 (13%)

Query: 14  AVAWEAGKP--LIIQDVEVAPPQAM--EVRIKIKYTSLCRTDLYFWESKGQTPL---FPR 66
            V    G P  L++ +VEV  P     EV +K+   S+   D        +  L   FP 
Sbjct: 1   VVYTRYGSPEVLLLLEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPP 60

Query: 67  IFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSE 126
           I G + AG V +VG GV+  +VGD V        G          G            +E
Sbjct: 61  IPGMDFAGEVVAVGSGVTRFKVGDEVF-------GRLPPKGG---G----------ALAE 100

Query: 127 YTVVHSGCVAKINP-LAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLA 184
           Y V     +AK    ++  +   +   G+ T L A  +  K + G  V + G  G VG  
Sbjct: 101 YVVAPESGLAKKPEGVSFEEAAALPVAGL-TALQALRDAGKVKPGQRVLINGASGGVGTF 159

Query: 185 AAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGV-DRS 243
           A + A+  GA  + GV  S++  E  +  G  + ++ +  D      +A    G   D  
Sbjct: 160 AVQIAKALGA-HVTGVC-STRNAELVRSLGADEVIDYTTED-----FVALTAGGEKYDVI 212

Query: 244 VECTGNIDNMISAFECVHDGW--GVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYK 301
            +  GN     S +         G  V VG      + +   + +      +   F   K
Sbjct: 213 FDAVGNSP--FSLYRASLALKPGGRYVSVGGGPSGLLLVLLLLPLTLGGGGRRLKFFLAK 270

Query: 302 P-RTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKG 343
           P   DL  + ++    +L+    I    P  +  +A+  +  G
Sbjct: 271 PNAEDLEQLAELVEEGKLKP--VIDSVYPLEDAPEAYRRLKSG 311

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319

>gnl|CDD|176203 cd08241, QOR1, Quinone oxidoreductase (QOR)

 Score = 86.4 bits (215), Expect = 4e-19
 Identities = 72/235 (30%), Positives = 104/235 (44%), Gaps = 31/235 (13%)

Query: 12  KAAVAWEAGKPLIIQDVEVAP-PQAM-EVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIF 68
           KA V  E G P  +   EV P P A  EVRI+++   +   DL   + K Q  P  P + 
Sbjct: 2   KAVVCKELGGPEDLVLEEVPPEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQVKPPLPFVP 61

Query: 69  GHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYT 128
           G E AGVVE+VGEGV+  +VGD V                           G   F+E  
Sbjct: 62  GSEVAGVVEAVGEGVTGFKVGDRV-------VA----------------LTGQGGFAEEV 98

Query: 129 VVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAE 187
           VV +  V  +      ++   L     T   A +  A+ + G +V V G  G VGLAA +
Sbjct: 99  VVPAAAVFPLPDGLSFEEAAALPVTYGTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQ 158

Query: 188 GARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVD 241
            A+  GA R+I    S ++   A+  G    ++  + D  ++E +  +T G GVD
Sbjct: 159 LAKALGA-RVIAAASSEEKLALARALGADHVIDYRDPD--LRERVKALTGGRGVD 210

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|181842 PRK09422, PRK09422, ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional

 Score = 86.2 bits (214), Expect = 5e-19
 Identities = 89/356 (25%), Positives = 151/356 (42%), Gaps = 55/356 (15%)

Query: 12  KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLY-----FWESKGQTPLFPR 66
           KAAV  +     ++ +  + P +  E  +K++Y  +C TDL+     F +  G      R
Sbjct: 2   KAAVVNKDHTGDVVVEKTLRPLKHGEALVKMEYCGVCHTDLHVANGDFGDKTG------R 55

Query: 67  IFGHEAAGVVESVGEGVSDLEVGDHV-LPVFTGECGDCRHCR--------------FSIN 111
           I GHE  G+V+ VG GV+ L+VGD V +  F   CG C +C               ++++
Sbjct: 56  ILGHEGIGIVKEVGPGVTSLKVGDRVSIAWFFEGCGHCEYCTTGRETLCRSVKNAGYTVD 115

Query: 112 GEPVNHFLGTSTFSEYTVVHSGCVAKI-NPLAPLDKVCILSCGVSTGLGATLNVAKPERG 170
           G            +E  +V +    K+   L P     I   GV+T     + V+  + G
Sbjct: 116 G----------GMAEQCIVTADYAVKVPEGLDPAQASSITCAGVTT--YKAIKVSGIKPG 163

Query: 171 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQE 230
             +A++G G +G  A + A+    +++I VD +  +   AK+ G    +N+   +  + +
Sbjct: 164 QWIAIYGAGGLGNLALQYAKNVFNAKVIAVDINDDKLALAKEVGADLTINSKRVE-DVAK 222

Query: 231 VIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNER 290
           +I E   GG   +V           A + V  G G  V VG+P  +++ ++ P  VL+  
Sbjct: 223 IIQE-KTGGAHAAVVTAVAKAAFNQAVDAVRAG-GRVVAVGLPP-ESMDLSIPRLVLDGI 279

Query: 291 TLKGTFFGNYKPRTDLPSVVDMYMNKQLELE---KFITHRIPFSEINKAFEYMVKG 343
            + G+  G    R DL          Q   E          P  +IN  F+ M +G
Sbjct: 280 EVVGSLVGT---RQDLEEAF------QFGAEGKVVPKVQLRPLEDINDIFDEMEQG 326

Length = 338

>gnl|CDD|132245 TIGR03201, dearomat_had, 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

 Score = 85.3 bits (211), Expect = 1e-18
 Identities = 89/341 (26%), Positives = 148/341 (43%), Gaps = 34/341 (9%)

Query: 18  EAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDL-YFWESKGQTPLFPRIFGHEAAGVV 76
           E GKP++   VE+    A +V +K+    +C TDL Y++         P   GHE +G V
Sbjct: 6   EPGKPMVKTRVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVRTNHALPLALGHEISGRV 65

Query: 77  ESVGEGVSDLEVGDHVLPVFTGECGDCRHCRFSINGE-------PVNHFLGTSTFSEYTV 129
              G G +   +G  V+      CG+C  C+ +  G        P N   G   F+ + V
Sbjct: 66  IQAGAGAASW-IGKAVIVPAVIPCGECELCK-TGRGTICRAQKMPGNDMQG--GFASHIV 121

Query: 130 VHSG--CVAKINPLA----PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGL 183
           V +   CV     LA    PL+ V +++  V+T   A +  A  ++G  V V G G VG 
Sbjct: 122 VPAKGLCVVDEARLAAAGLPLEHVSVVADAVTTPYQAAVQ-AGLKKGDLVIVIGAGGVGG 180

Query: 184 AAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHD-RPIQEVIAEMTNGGVDR 242
              + A+  GA+ ++ +D   ++ E  K FG    +N  +   R ++++I         R
Sbjct: 181 YMVQTAKAMGAA-VVAIDIDPEKLEMMKGFGADLTLNPKDKSAREVKKLIKAFAKARGLR 239

Query: 243 S-----VECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFF 297
           S      EC+G+     SA   +  G G  V+VG       +    +   + R L     
Sbjct: 240 STGWKIFECSGSKPGQESALSLLSHG-GTLVVVGYTMAKTEYRLSNLMAFHARAL----- 293

Query: 298 GNYKPRTDL-PSVVDMYMNKQLELEKFITHRIPFSEINKAF 337
           GN+    D  P+ +D+ ++ +++L  F+  R P  +I   F
Sbjct: 294 GNWGCPPDRYPAALDLVLDGKIQLGPFVERR-PLDQIEHVF 333

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA. Length = 349

>gnl|CDD|176232 cd08271, MDR5, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 81.6 bits (202), Expect = 2e-17
 Identities = 71/277 (25%), Positives = 111/277 (40%), Gaps = 34/277 (12%)

Query: 16  AWEAGKP-----LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGH 70
           AW   KP     L ++++E+  P A EV +K+    L   D            +P + G 
Sbjct: 3   AWVLPKPGAALQLTLEEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPAWSYPHVPGV 62

Query: 71  EAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVV 130
           + AGVV +VG  V+  +VGD V            H   +  G          +F+EYTVV
Sbjct: 63  DGAGVVVAVGAKVTGWKVGDRV----------AYHASLARGG----------SFAEYTVV 102

Query: 131 HSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGA 189
            +  V  +      ++   L C   T   A     + E G ++ + G  G VG  A + A
Sbjct: 103 DARAVLPLPDSLSFEEAAALPCAGLTAYQALFKKLRIEAGRTILITGGAGGVGSFAVQLA 162

Query: 190 RIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTG 248
           + AG  R+I    S + FE  K  G    ++   +D  + E I E+T G GVD  ++  G
Sbjct: 163 KRAGL-RVI-TTCSKRNFEYVKSLGADHVID--YNDEDVCERIKEITGGRGVDAVLDTVG 218

Query: 249 NIDNMISAFECVHDGWGVAVLVGVP--SKDAVFMTKP 283
             +   +    +     +  + G P  S D  F    
Sbjct: 219 G-ETAAALAPTLAFNGHLVCIQGRPDASPDPPFTRAL 254

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 325

>gnl|CDD|176189 cd05286, QOR2, Quinone oxidoreductase (QOR)

 Score = 79.8 bits (198), Expect = 7e-17
 Identities = 90/362 (24%), Positives = 138/362 (38%), Gaps = 88/362 (24%)

Query: 12  KAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL-FPRIF 68
           KA    + G P  L  +DV V  P   EV ++     +   D YF    G  PL  P + 
Sbjct: 1   KAVRIHKTGGPEVLEYEDVPVPEPGPGEVLVRNTAIGVNFIDTYF--RSGLYPLPLPFVL 58

Query: 69  GHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYT 128
           G E AGVVE+VG GV+  +VGD V   + G                         ++EY 
Sbjct: 59  GVEGAGVVEAVGPGVTGFKVGDRV--AYAG---------------------PPGAYAEYR 95

Query: 129 VVHSGCVAKINPLAPLDKVCILSCGVSTGLGATL------------NVAKPERGSSVAVF 176
           VV +  + K+              G+S    A L                 + G +V V 
Sbjct: 96  VVPASRLVKLPD------------GISDETAAALLLQGLTAHYLLRETYPVKPGDTVLVH 143

Query: 177 GL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEM 235
              G VGL   + A+  GA  +IG   S ++ E A+  G    +N  + D    E + E+
Sbjct: 144 AAAGGVGLLLTQWAKALGA-TVIGTVSSEEKAELARAAGADHVINYRDED--FVERVREI 200

Query: 236 TNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVG-----VP-------SKDAVFMTK 282
           T G GVD   +  G  D    + + +    G  V  G     VP       SK ++F+T+
Sbjct: 201 TGGRGVDVVYDGVG-KDTFEGSLDSLRPR-GTLVSFGNASGPVPPFDLLRLSKGSLFLTR 258

Query: 283 PINVLNERTLKGTFFGNYKPRTDLPS----VVDMYMNKQLELEKFITHRIPFSEINKAFE 338
           P           + F     R +L +    + D   + +L++E  I  R P ++  +A  
Sbjct: 259 P-----------SLFHYIATREELLARAAELFDAVASGKLKVE--IGKRYPLADAAQAHR 305

Query: 339 YM 340
            +
Sbjct: 306 DL 307

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone and 1,4-naphthoquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 320

>gnl|CDD|176223 cd08262, Zn_ADH8, Alcohol dehydrogenases of the MDR family

 Score = 78.9 bits (195), Expect = 2e-16
 Identities = 76/353 (21%), Positives = 127/353 (35%), Gaps = 53/353 (15%)

Query: 12  KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKG---QTPLFPR-- 66
           +AAV  +   PL+++DV    P   +V +K+    +C +DL+              P   
Sbjct: 2   RAAVFRDG--PLVVRDVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLM 59

Query: 67  ------IFGHEAAGVVESVGEGVS-DLEVGDHV--LPVFTGECGDCRHCRFSINGEPVNH 117
                 + GHE  G V   G G    L+VG  V  LP+    CG    C           
Sbjct: 60  DLGADIVLGHEFCGEVVDYGPGTERKLKVGTRVTSLPLLL--CGQGASC----------- 106

Query: 118 FLGTST-----FSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSS 172
            +G S      ++EY ++    + ++     ++   +    ++ GL A +  A+   G  
Sbjct: 107 GIGLSPEAPGGYAEYMLLSEALLLRVPDGLSMEDAALTE-PLAVGLHA-VRRARLTPGEV 164

Query: 173 VAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVI 232
             V G G +GLA     +  G   I+  D S +R   A   G    V+ +          
Sbjct: 165 ALVIGCGPIGLAVIAALKARGVGPIVASDFSPERRALALAMGADIVVDPAADSPFAAWAA 224

Query: 233 AEMTNGGVDRSV--ECTGNIDNMISAFECVHDGWGVAVLVGV-PSKDAVF----MTKPIN 285
                GG   +V  EC G    +    E    G G  V+VGV    D +     + K + 
Sbjct: 225 ELARAGGPKPAVIFECVGAPGLIQQIIEGAPPG-GRIVVVGVCMESDNIEPALAIRKELT 283

Query: 286 VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFE 338
           +         F   Y P  +    +D     ++++   +T  +    +  AFE
Sbjct: 284 L--------QFSLGYTPE-EFADALDALAEGKVDVAPMVTGTVGLDGVPDAFE 327

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341

>gnl|CDD|176192 cd08230, glucose_DH, Glucose dehydrogenase

 Score = 73.4 bits (181), Expect = 1e-14
 Identities = 100/372 (26%), Positives = 139/372 (37%), Gaps = 67/372 (18%)

Query: 14  AVAWEAGKP-LIIQDVEVAPPQAMEVRIKIKYTSLCRTD------LYFWESKGQTPLFPR 66
           A+A + GKP + + D+    P   EV ++     +C TD       Y     G+  L   
Sbjct: 3   AIAVKPGKPGVRVVDIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDFL--- 59

Query: 67  IFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCR-----FSINGEPVNHFLGT 121
           + GHEA GVVE VG+G S L  GD V+P      G C +CR     F   GE      G 
Sbjct: 60  VLGHEALGVVEEVGDG-SGLSPGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYTER--GI 116

Query: 122 S----TFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK----------- 166
                   EY V     + K+ P   L  V +L       L     V K           
Sbjct: 117 KGLHGFMREYFVDDPEYLVKVPP--SLADVGVL-------LEPLSVVEKAIEQAEAVQKR 167

Query: 167 --PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK---KFGVTDFVNT 221
                     V G G +GL AA   R+ G   +  ++R      +A    + G T +VN+
Sbjct: 168 LPTWNPRRALVLGAGPIGLLAALLLRLRGF-EVYVLNRRDPPDPKADIVEELGAT-YVNS 225

Query: 222 SEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFM- 280
           S+   P+ EV      G  D  +E TG       A   +    GV +L GVP     F  
Sbjct: 226 SKT--PVAEVKLV---GEFDLIIEATGVPPLAFEALPALAPN-GVVILFGVPGGGREFEV 279

Query: 281 -TKPIN---VLNERTLKGTFFGNYKPRTDLPSVVDMY--MNKQLE--LEKFITHRIPFSE 332
               +N   VL  + L G+   N   +      V+       +    LE+ IT R+P  E
Sbjct: 280 DGGELNRDLVLGNKALVGSVNAN---KRHFEQAVEDLAQWKYRWPGVLERLITRRVPLEE 336

Query: 333 INKAFEYMVKGE 344
             +A      GE
Sbjct: 337 FAEALTEKPDGE 348

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 355

>gnl|CDD|176204 cd08242, MDR_like, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 71.5 bits (176), Expect = 5e-14
 Identities = 89/347 (25%), Positives = 132/347 (38%), Gaps = 64/347 (18%)

Query: 14  AVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAA 73
           A+  + G  L ++D+    P   E  +++    +C TDL  +  KG  P FP + GHE  
Sbjct: 3   ALVLDGGLDLRVEDLPKPEPPPGEALVRVLLAGICNTDLEIY--KGYYP-FPGVPGHEFV 59

Query: 74  GVVESVGEG--VSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNH-----FLGTST--- 123
           G+VE   E   V    VG+  +      CG C +CR    G    H      LG      
Sbjct: 60  GIVEEGPEAELVGKRVVGEINIA-----CGRCEYCR---RGLY-THCPNRTVLGIVDRDG 110

Query: 124 -FSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTG-------LGATLNV---AKPERGSS 172
            F+EY               PL+ + ++   V          L A L +        G  
Sbjct: 111 AFAEYLT------------LPLENLHVVPDLVPDEQAVFAEPLAAALEILEQVPITPGDK 158

Query: 173 VAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVI 232
           VAV G G +GL  A+   + G   ++ V R S++   A++ GV            +    
Sbjct: 159 VAVLGDGKLGLLIAQVLALTGP-DVVLVGRHSEKLALARRLGVE----------TVLPDE 207

Query: 233 AEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTL 292
           AE   GG D  VE TG+   +  A   V    G  VL    +  A F      V+NE TL
Sbjct: 208 AESEGGGFDVVVEATGSPSGLELALRLVRPR-GTVVLKSTYAGPASFDLTKA-VVNEITL 265

Query: 293 KGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEY 339
            G+  G           + +     ++++  IT   P  E  +AFE 
Sbjct: 266 VGSRCG------PFAPALRLLRKGLVDVDPLITAVYPLEEALEAFER 306

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319

>gnl|CDD|176234 cd08273, MDR8, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 71.1 bits (175), Expect = 8e-14
 Identities = 75/352 (21%), Positives = 124/352 (35%), Gaps = 71/352 (20%)

Query: 23  LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKG-QTPLFPRIFGHEAAGVVESVGE 81
           L + + ++  P A EV +K++ + +   D+          P  P   G++  G V+++G 
Sbjct: 15  LKVVEADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPDQPPLPFTPGYDLVGRVDALGS 74

Query: 82  GVSDLEVGDHV--LPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKIN 139
           GV+  EVGD V  L    G                          +EY  + +  +  + 
Sbjct: 75  GVTGFEVGDRVAALTRVGGN-------------------------AEYINLDAKYLVPVP 109

Query: 140 PLAPLDKVCILSCGVSTGLGA--TLN-VAKPERGSSVAVFGL-GAVGLAAAEGARIAGAS 195
                 +     C V   + A   L+  AK   G  V + G  G VG A  E A +AGA 
Sbjct: 110 EGVDAAE---AVCLVLNYVTAYQMLHRAAKVLTGQRVLIHGASGGVGQALLELALLAGA- 165

Query: 196 RIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMIS 255
            + G   S +     ++ G T     ++   P     A +T GGVD   +  G  ++   
Sbjct: 166 EVYGTA-SERNHAALRELGATPIDYRTKDWLP-----AMLTPGGVDVVFDGVG-GESYEE 218

Query: 256 AFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNER----TLKGTFFGN------------ 299
           ++  +  G G  V  G  S           + +       LK    G             
Sbjct: 219 SYAALAPG-GTLVCYGGNSSLLQGRRSLAALGSLLARLAKLKLLPTGRRATFYYVWRDRA 277

Query: 300 ---YKPRTDLPSVVDMYMNKQLELEKF---ITHRIPFSEINKAFEYMVKGEG 345
                 R DL  ++D+     L   K    I  R+P SE+ +A   +  G+ 
Sbjct: 278 EDPKLFRQDLTELLDL-----LAKGKIRPKIAKRLPLSEVAEAHRLLESGKV 324

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 331

>gnl|CDD|176205 cd08243, quinone_oxidoreductase_like_1, Quinone oxidoreductase (QOR)

 Score = 70.3 bits (173), Expect = 1e-13
 Identities = 75/349 (21%), Positives = 137/349 (39%), Gaps = 62/349 (17%)

Query: 12  KAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFG 69
           KA V  + G P  L ++++ +  P+   V I++K   L R++++  +    +  FPR+ G
Sbjct: 2   KAIVIEQPGGPEVLKLREIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSPSVKFPRVLG 61

Query: 70  HEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTS---TFSE 126
            EA G VE    G      G  V                +  G      +G +   +++E
Sbjct: 62  IEAVGEVEEAPGG--TFTPGQRV---------------ATAMGG-----MGRTFDGSYAE 99

Query: 127 YTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGA---TLNVAKPE----RGSSVAVFGLG 179
           YT+V +  V  I+      ++  L     T  G+   +L +   +    RG + +V GL 
Sbjct: 100 YTLVPNEQVYAIDSDLSWAELAALPETYYTAWGSLFRSLGLQPGDTLLIRGGTSSV-GLA 158

Query: 180 AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD-FVNTSEHDRPIQEVIAEMTNG 238
           A+ LA A GA +   +      RS +R    K+ G  +  ++       ++        G
Sbjct: 159 ALKLAKALGATVTATT------RSPERAALLKELGADEVVIDDGAIAEQLRAA-----PG 207

Query: 239 GVDRSVECTGN--IDNMISAFECVHDGWGVAVLVGVPSKDAVFMT-KPINVL---NERTL 292
           G D+ +E  G   + +   +   +  G G+  + G+           P++ +      TL
Sbjct: 208 GFDKVLELVGTATLKD---SLRHLRPG-GIVCMTGLLGGQWTLEDFNPMDDIPSGVNLTL 263

Query: 293 KGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRI-PFSEINKAFEYM 340
            G       P+T L  + D      L++      ++  F EI +A  YM
Sbjct: 264 TG-SSSGDVPQTPLQELFDFVAAGHLDI---PPSKVFTFDEIVEAHAYM 308

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 320

>gnl|CDD|176179 cd05195, enoyl_red, enoyl reductase of polyketide synthase

 Score = 68.4 bits (168), Expect = 5e-13
 Identities = 54/207 (26%), Positives = 82/207 (39%), Gaps = 29/207 (14%)

Query: 37  EVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVF 96
           EV +++K   L   D+    + G  P      G E +G+V  VG GV+ L+VGD V+   
Sbjct: 2   EVEVEVKAAGLNFRDVLV--ALGLLPGDETPLGLECSGIVTRVGSGVTGLKVGDRVM--- 56

Query: 97  TGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVST 156
                                 L    F+ +  V +  V KI      ++   L     T
Sbjct: 57  ---------------------GLAPGAFATHVRVDARLVVKIPDSLSFEEAATLPVAYLT 95

Query: 157 GLGATLNVAKPERGSSVAVF-GLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV 215
              A +++A+ ++G SV +    G VG AA + A+  GA     V    KR    +  G 
Sbjct: 96  AYYALVDLARLQKGESVLIHAAAGGVGQAAIQLAQHLGAEVFATVGSEEKREFLRELGGP 155

Query: 216 TDFVNTSEHDRPIQEVIAEMTNG-GVD 241
            D + +S  D    + I   T G GVD
Sbjct: 156 VDHIFSS-RDLSFADGILRATGGRGVD 181

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 293

>gnl|CDD|176233 cd08272, MDR6, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 68.0 bits (167), Expect = 9e-13
 Identities = 72/294 (24%), Positives = 114/294 (38%), Gaps = 49/294 (16%)

Query: 12  KAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL---FPR 66
           KA V    G P    +++V    P   +V +++  + +   D      +G        P 
Sbjct: 2   KALVLESFGGPEVFELREVPRPQPGPGQVLVRVHASGVNPLDTKI--RRGGAAARPPLPA 59

Query: 67  IFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTS-TFS 125
           I G + AGVVE+VGEGV+   VGD V               +   G       G   + +
Sbjct: 60  ILGCDVAGVVEAVGEGVTRFRVGDEV---------------YGCAG----GLGGLQGSLA 100

Query: 126 EYTVVHSGCVA-KINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVF-GLGAVGL 183
           EY VV +  +A K   L+  +    L     T     ++ A  + G +V +  G G VG 
Sbjct: 101 EYAVVDARLLALKPANLSMREAAA-LPLVGITAWEGLVDRAAVQAGQTVLIHGGAGGVGH 159

Query: 184 AAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDR 242
            A + A+ AGA R+     S K    A+  G    +    +   + E +AE T G G D 
Sbjct: 160 VAVQLAKAAGA-RVYATASSEKA-AFARSLGADPIIY---YRETVVEYVAEHTGGRGFDV 214

Query: 243 SVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD------------AVFMTKPI 284
             +  G  + + ++FE V     V  ++G  + D             VF   P+
Sbjct: 215 VFDTVGG-ETLDASFEAVALYGRVVSILGGATHDLAPLSFRNATYSGVFTLLPL 267

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 326

>gnl|CDD|166155 PLN02514, PLN02514, cinnamyl-alcohol dehydrogenase

 Score = 67.9 bits (166), Expect = 1e-12
 Identities = 85/331 (25%), Positives = 135/331 (40%), Gaps = 52/331 (15%)

Query: 37  EVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHV-LPV 95
           +V IK+ Y  +C TDL+  ++      +P + GHE  G V  VG  VS   VGD V + V
Sbjct: 36  DVVIKVIYCGICHTDLHQIKNDLGMSNYPMVPGHEVVGEVVEVGSDVSKFTVGDIVGVGV 95

Query: 96  FTGECGDCRHCR-----------FSINGEPVNHFLGTSTFSEYTVVHSGCVAKI-NPLAP 143
             G CG+C  C+           +S N    +       F+   VV    V KI   +AP
Sbjct: 96  IVGCCGECSPCKSDLEQYCNKRIWSYNDVYTDGKPTQGGFASAMVVDQKFVVKIPEGMAP 155

Query: 144 LDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS 203
                +L  GV T      +    + G    + GLG VG    + A+  G   +  +  S
Sbjct: 156 EQAAPLLCAGV-TVYSPLSHFGLKQSGLRGGILGLGGVGHMGVKIAKAMG-HHVTVISSS 213

Query: 204 SKRFEEA-KKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVH- 261
            K+ EEA +  G  D++ +S+         AEM         E   ++D +I      H 
Sbjct: 214 DKKREEALEHLGADDYLVSSD--------AAEMQ--------EAADSLDYIIDTVPVFHP 257

Query: 262 ----------DGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVD 311
                     D  G  +L+GV +    F+T P+ +L  + + G+F G+ K   +   +++
Sbjct: 258 LEPYLSLLKLD--GKLILMGVINTPLQFVT-PMLMLGRKVITGSFIGSMK---ETEEMLE 311

Query: 312 MYMNKQLELEKFITHRIPFSEINKAFEYMVK 342
               K L     +   +    +N AFE + K
Sbjct: 312 FCKEKGL---TSMIEVVKMDYVNTAFERLEK 339

Length = 357

>gnl|CDD|176225 cd08264, Zn_ADH_like2, Alcohol dehydrogenases of the MDR family

 Score = 67.8 bits (166), Expect = 1e-12
 Identities = 60/194 (30%), Positives = 84/194 (43%), Gaps = 22/194 (11%)

Query: 23  LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEG 82
           L ++DV+   P   EV I++K   +   D     +    P+ P I G E AGVVE VG+ 
Sbjct: 14  LKVEDVKDPKPGPGEVLIRVKMAGVNPVDYNVINAVKVKPM-PHIPGAEFAGVVEEVGDH 72

Query: 83  VSDLEVGDHVL---PVFTGECGDC-----RHCRFSINGEPVNHFLGTST---FSEYTVVH 131
           V  ++ GD V+    VF G C  C       CR   NG      +G  +   ++EY VV 
Sbjct: 73  VKGVKKGDRVVVYNRVFDGTCDMCLSGNEMLCR---NG----GIIGVVSNGGYAEYIVVP 125

Query: 132 SGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGAR 190
              + KI      +    L     T   A L  A    G +V VFG  G  G+ A + A+
Sbjct: 126 EKNLFKIPDSISDELAASLPVAALTAYHA-LKTAGLGPGETVVVFGASGNTGIFAVQLAK 184

Query: 191 IAGASRIIGVDRSS 204
           + GA  +I V R  
Sbjct: 185 MMGA-EVIAVSRKD 197

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|234025 TIGR02819, fdhA_non_GSH, formaldehyde dehydrogenase, glutathione-independent

 Score = 68.0 bits (166), Expect = 1e-12
 Identities = 67/235 (28%), Positives = 104/235 (44%), Gaps = 31/235 (13%)

Query: 38  VRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFT 97
           V +K+  T++C +D +    +   P    + GHE  G V   G  V  +++GD V   F 
Sbjct: 36  VILKVVTTNICGSDQHMVRGRTTAPT-GLVLGHEITGEVIEKGRDVEFIKIGDIVSVPFN 94

Query: 98  GECGDCRHCRFSING--EPVNHFLGTSTF------------SEYTVVHSGCVAKINPLAP 143
             CG CR+C+    G    VN     + +            SEY +V     A  N L  
Sbjct: 95  IACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDMGGWVGGQSEYVMVP---YADFNLLKF 151

Query: 144 LDK---------VCILSCGVSTGL-GATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAG 193
            D+         + +LS    TG  GA      P  GS+V + G G VGLAAA  A++ G
Sbjct: 152 PDRDQALEKIRDLTMLSDIFPTGYHGAVTAGVGP--GSTVYIAGAGPVGLAAAASAQLLG 209

Query: 194 ASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG 248
           A+ +I  D +  R  +A+ FG  + V+ S+     +++   +    VD +V+C G
Sbjct: 210 AAVVIVGDLNPARLAQARSFGC-ETVDLSKDATLPEQIEQILGEPEVDCAVDCVG 263

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent [Central intermediary metabolism, One-carbon metabolism]. Length = 393

>gnl|CDD|173547 PTZ00354, PTZ00354, alcohol dehydrogenase; Provisional

 Score = 66.6 bits (163), Expect = 2e-12
 Identities = 53/233 (22%), Positives = 85/233 (36%), Gaps = 36/233 (15%)

Query: 23  LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWE-----SKGQTPLFPRIFGHEAAGVVE 77
           L I +     P+  +V IK+    + R D    +       G +     I G E AG VE
Sbjct: 16  LKIGESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPPPPGSSE----ILGLEVAGYVE 71

Query: 78  SVGEGVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAK 137
            VG  V   + GD V+ +  G                         ++EY V H G V  
Sbjct: 72  DVGSDVKRFKEGDRVMALLPG-----------------------GGYAEYAVAHKGHVMH 108

Query: 138 INPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVF-GLGAVGLAAAEGARIAGASR 196
           I      ++   +     T           ++G SV +  G   VG AAA+ A   GA+ 
Sbjct: 109 IPQGYTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGAAT 168

Query: 197 IIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTG 248
           II    S ++ +  KK      +   + +      + ++T   GV+  ++C G
Sbjct: 169 IITTS-SEEKVDFCKKLAAIILIRYPD-EEGFAPKVKKLTGEKGVNLVLDCVG 219

Length = 334

>gnl|CDD|176180 cd05276, p53_inducible_oxidoreductase, PIG3 p53-inducible quinone oxidoreductase

 Score = 63.2 bits (155), Expect = 3e-11
 Identities = 70/250 (28%), Positives = 98/250 (39%), Gaps = 61/250 (24%)

Query: 12  KAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFP---R 66
           KA V  E G P  L + +V    P   EV I++    + R DL   + +G  P  P    
Sbjct: 2   KAIVIKEPGGPEVLELGEVPKPAPGPGEVLIRVAAAGVNRADLL--QRQGLYPPPPGASD 59

Query: 67  IFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSE 126
           I G E AGVV +VG GV+  +VGD V       C                  L    ++E
Sbjct: 60  ILGLEVAGVVVAVGPGVTGWKVGDRV-------CA----------------LLAGGGYAE 96

Query: 127 YTVVHSGCVAKINPLAPLDKVCILSCGVS---------TGLGATLNV---AKPERGSSVA 174
           Y VV +G +  +              G+S             A  N+      + G +V 
Sbjct: 97  YVVVPAGQLLPVPE------------GLSLVEAAALPEVFFTAWQNLFQLGGLKAGETVL 144

Query: 175 VFGLGA--VGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVI 232
           + G GA  VG AA + A+  GA R+I    S ++ E  +  G    +N    D    E +
Sbjct: 145 IHG-GASGVGTAAIQLAKALGA-RVIATAGSEEKLEACRALGADVAINYRTED--FAEEV 200

Query: 233 AEMTNG-GVD 241
            E T G GVD
Sbjct: 201 KEATGGRGVD 210

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|176213 cd08251, polyketide_synthase, polyketide synthase

 Score = 62.1 bits (151), Expect = 6e-11
 Identities = 69/216 (31%), Positives = 92/216 (42%), Gaps = 28/216 (12%)

Query: 29  EVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLE 87
           EVAPP   EVRI+++  SL   DL        T P +P   G EA+GVV +VG  V+ L 
Sbjct: 1   EVAPPGPGEVRIQVRAFSLNFGDLLCVRGLYPTMPPYPFTPGFEASGVVRAVGPHVTRLA 60

Query: 88  VGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKV 147
           VGD V+   TGE           +   V            TV     V K   L+  ++ 
Sbjct: 61  VGDEVI-AGTGE-------SMGGHATLV------------TVPEDQVVRKPASLS-FEEA 99

Query: 148 CILSCGVSTGLGATLNVAKPERGSSVAV-FGLGAVGLAAAEGARIAGASRIIGVDRSSKR 206
           C L     T + A    A   +G  + +    G  GL A + AR+ GA  I     S  +
Sbjct: 100 CALPVVFLTVIDA-FARAGLAKGEHILIQTATGGTGLMAVQLARLKGAE-IYATASSDDK 157

Query: 207 FEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVD 241
            E  K+ GV   +N  E D   +E I  +T G GVD
Sbjct: 158 LEYLKQLGVPHVINYVEED--FEEEIMRLTGGRGVD 191

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 303

>gnl|CDD|166227 PLN02586, PLN02586, probable cinnamyl alcohol dehydrogenase

 Score = 60.3 bits (146), Expect = 4e-10
 Identities = 51/202 (25%), Positives = 82/202 (40%), Gaps = 18/202 (8%)

Query: 37  EVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHV-LPV 95
           +V +KI Y  +C +DL+  +++     +P + GHE  G+V  +G+ V   + GD V + V
Sbjct: 39  DVTVKILYCGVCHSDLHTIKNEWGFTRYPIVPGHEIVGIVTKLGKNVKKFKEGDRVGVGV 98

Query: 96  FTGECGDCRHCR-----------FSINGEPVNHFLGTSTFSEYT---VVHSGCVAKINPL 141
             G C  C  C            F+ N    +   GT  +  Y+   VV    V +    
Sbjct: 99  IVGSCKSCESCDQDLENYCPKMIFTYNSIGHD---GTKNYGGYSDMIVVDQHFVLRFPDN 155

Query: 142 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVD 201
            PLD    L C   T           E G  + V GLG +G  A +  +  G    +   
Sbjct: 156 LPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISS 215

Query: 202 RSSKRFEEAKKFGVTDFVNTSE 223
            S+K  E   + G   F+ +++
Sbjct: 216 SSNKEDEAINRLGADSFLVSTD 237

Length = 360

>gnl|CDD|177834 PLN02178, PLN02178, cinnamyl-alcohol dehydrogenase

 Score = 58.9 bits (142), Expect = 9e-10
 Identities = 76/323 (23%), Positives = 131/323 (40%), Gaps = 31/323 (9%)

Query: 37  EVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHV-LPV 95
           +V +KI +  +C +DL+  ++      +P I GHE  G+   VG+ V+  + GD V + V
Sbjct: 33  DVTVKILFCGVCHSDLHTIKNHWGFSRYPIIPGHEIVGIATKVGKNVTKFKEGDRVGVGV 92

Query: 96  FTGECGDCRHCR-----------FSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPL 144
             G C  C  C            F+ N    +       +S+  VV    V  I    P 
Sbjct: 93  IIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRNQGGYSDVIVVDHRFVLSIPDGLPS 152

Query: 145 DKVCILSC-GVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS 203
           D    L C G++            E G  + V GLG +G  A +  +  G  R+  + RS
Sbjct: 153 DSGAPLLCAGITVYSPMKYYGMTKESGKRLGVNGLGGLGHIAVKIGKAFGL-RVTVISRS 211

Query: 204 SKRFEEA-KKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHD 262
           S++  EA  + G   F+ T++  +  + V      G +D  ++       ++  F  +  
Sbjct: 212 SEKEREAIDRLGADSFLVTTDSQKMKEAV------GTMDFIIDTVSAEHALLPLFSLLKV 265

Query: 263 GWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMY-MNKQLELE 321
             G  V +G+P K       P+ VL  + + G+  G  K   ++      + +   +EL 
Sbjct: 266 S-GKLVALGLPEKPLDLPIFPL-VLGRKMVGGSQIGGMKETQEMLEFCAKHKIVSDIEL- 322

Query: 322 KFITHRIPFSEINKAFEYMVKGE 344
                 I  S+IN A + + K +
Sbjct: 323 ------IKMSDINSAMDRLAKSD 339

Length = 375

>gnl|CDD|176645 cd05282, ETR_like, 2-enoyl thioester reductase-like

 Score = 58.4 bits (142), Expect = 1e-09
 Identities = 74/346 (21%), Positives = 124/346 (35%), Gaps = 72/346 (20%)

Query: 21  KPLIIQDVEVA--PPQAMEVRIKIKYTSLCRTDLYFWESKGQ----TPLFPRIFGHEAAG 74
            PL+++ V +   PP   EV +++    +  +DL      G      PL P + G+E  G
Sbjct: 10  LPLVLELVSLPIPPPGPGEVLVRMLAAPINPSDLI--TISGAYGSRPPL-PAVPGNEGVG 66

Query: 75  VVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVV---- 130
           VV  VG GVS L VG  VLP+                        G  T+ EY V     
Sbjct: 67  VVVEVGSGVSGLLVGQRVLPL-----------------------GGEGTWQEYVVAPADD 103

Query: 131 ----------HSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLG- 179
                         +  INPL              T         K   G  V       
Sbjct: 104 LIPVPDSISDEQAAMLYINPL--------------TAWLMLTEYLKLPPGDWVIQNAANS 149

Query: 180 AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG- 238
           AVG    + A++ G  + I V R  ++ EE K  G  + +++S  D  + + + E T G 
Sbjct: 150 AVGRMLIQLAKLLGF-KTINVVRRDEQVEELKALGADEVIDSSPED--LAQRVKEATGGA 206

Query: 239 GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFG 298
           G   +++  G       A   +  G G  V  G+ S + V   + + +  + T++G +  
Sbjct: 207 GARLALDAVGGESATRLA-RSLRPG-GTLVNYGLLSGEPVPFPRSVFIFKDITVRGFWLR 264

Query: 299 NYKPRTDLPSVVDMY--MNKQLELEK---FITHRIPFSEINKAFEY 339
            +       +  + +  + K +E       +  + P  +  +A   
Sbjct: 265 QWLHSATKEAKQETFAEVIKLVEAGVLTTPVGAKFPLEDFEEAVAA 310

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 323

>gnl|CDD|176250 cd08290, ETR, 2-enoyl thioester reductase (ETR)

 Score = 57.6 bits (140), Expect = 3e-09
 Identities = 45/186 (24%), Positives = 67/186 (36%), Gaps = 29/186 (15%)

Query: 61  TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLG 120
           TP  P + G+E  G V  VG GV  L+ GD V+                    P+   LG
Sbjct: 60  TPEPPAVGGNEGVGEVVKVGSGVKSLKPGDWVI--------------------PLRPGLG 99

Query: 121 TSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFG-LG 179
             T+  + VV +  + K+      ++   LS    T      +  K + G  V   G   
Sbjct: 100 --TWRTHAVVPADDLIKVPNDVDPEQAATLSVNPCTAYRLLEDFVKLQPGDWVIQNGANS 157

Query: 180 AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSE-HDRPIQEVIAE 234
           AVG A  + A++ G  + I V R     EE K+     G    +   E       E++  
Sbjct: 158 AVGQAVIQLAKLLGI-KTINVVRDRPDLEELKERLKALGADHVLTEEELRSLLATELLKS 216

Query: 235 MTNGGV 240
              G  
Sbjct: 217 APGGRP 222

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 341

>gnl|CDD|131869 TIGR02822, adh_fam_2, zinc-binding alcohol dehydrogenase family protein

 Score = 56.9 bits (137), Expect = 5e-09
 Identities = 61/206 (29%), Positives = 92/206 (44%), Gaps = 34/206 (16%)

Query: 16  AWEAGKPLIIQD-------VEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLF-PRI 67
           AWE  +P  I+D         V  P   E+ ++++   +CRTDL+   S+G  P+  PR+
Sbjct: 1   AWEVERPGPIEDGPLRFVERPVPRPGPGELLVRVRACGVCRTDLHV--SEGDLPVHRPRV 58

Query: 68  F-GHEAAGVVESVGEGVSDLEVGDHV-LPVFTGECGDCRHC-RFSINGEPVNHFLGTST- 123
             GHE  G V   G       VGD V +      CG CR+C R + N  P + + G  T 
Sbjct: 59  TPGHEVVGEVAGRGADAGGFAVGDRVGIAWLRRTCGVCRYCRRGAENLCPASRYTGWDTD 118

Query: 124 --FSEYTVVHSGCVAKI------NPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAV 175
             ++EYT V +    ++        LAPL     L  G+  G  A L  + P  G  + +
Sbjct: 119 GGYAEYTTVPAAFAYRLPTGYDDVELAPL-----LCAGI-IGYRALLRASLPP-GGRLGL 171

Query: 176 FGLGAVG-----LAAAEGARIAGASR 196
           +G G        +A A+GA +   +R
Sbjct: 172 YGFGGSAHLTAQVALAQGATVHVMTR 197

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized [Energy metabolism, Fermentation]. Length = 329

>gnl|CDD|182701 PRK10754, PRK10754, quinone oxidoreductase, NADPH-dependent; Provisional

 Score = 56.3 bits (136), Expect = 6e-09
 Identities = 67/237 (28%), Positives = 93/237 (39%), Gaps = 58/237 (24%)

Query: 20  GKPLIIQDVEVAP--PQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVE 77
           G P ++Q VE  P  P   EV+++ K   +   D Y        P  P   G EAAGVV 
Sbjct: 11  GGPEVLQAVEFTPADPAENEVQVENKAIGINYIDTYIRSGLYPPPSLPSGLGTEAAGVVS 70

Query: 78  SVGEGVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAK 137
            VG GV  ++VGD V+                            S    Y+ VH+     
Sbjct: 71  KVGSGVKHIKVGDRVV-------------------------YAQSALGAYSSVHN----- 100

Query: 138 INPLAPLDKVCILSCGVSTGLGAT-----LNV---------AKPERGSSVAVF--GLGAV 181
                P DK  IL   +S    A      L V          KP+      +F    G V
Sbjct: 101 ----VPADKAAILPDAISFEQAAASFLKGLTVYYLLRKTYEIKPDE---QFLFHAAAGGV 153

Query: 182 GLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG 238
           GL A + A+  GA ++IG   S+++ + AKK G    +N  E +  I E + E+T G
Sbjct: 154 GLIACQWAKALGA-KLIGTVGSAQKAQRAKKAGAWQVINYREEN--IVERVKEITGG 207

Length = 327

>gnl|CDD|176252 cd08292, ETR_like_2, 2-enoyl thioester reductase (ETR) like proteins, child 2

 Score = 55.4 bits (134), Expect = 1e-08
 Identities = 68/252 (26%), Positives = 94/252 (37%), Gaps = 70/252 (27%)

Query: 12  KAAVAWEAGKP---LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFW---ESKGQTPLFP 65
           +AAV  + G P   L I +V    P A EV ++   + +   DL  W    + G  P  P
Sbjct: 2   RAAVHTQFGDPADVLEIGEVPKPTPGAGEVLVRTTLSPIHNHDL--WTIRGTYGYKPELP 59

Query: 66  RIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFS 125
            I G EA GVV++VGEGV  L+VG  V        G                     T++
Sbjct: 60  AIGGSEAVGVVDAVGEGVKGLQVGQRV--AVAPVHG---------------------TWA 96

Query: 126 EYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFG-------- 177
           EY V            AP D +  L  G+S  + A L +A P     +  F         
Sbjct: 97  EYFV------------APADGLVPLPDGISDEVAAQL-IAMPLSALMLLDFLGVKPGQWL 143

Query: 178 -----LGAVG-----LAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRP 227
                 GAVG     LAAA G        +I + R      E +  G+   V+T +    
Sbjct: 144 IQNAAGGAVGKLVAMLAAARGI------NVINLVRRDAGVAELRALGIGPVVSTEQPG-- 195

Query: 228 IQEVIAEMTNGG 239
            Q+ + E   G 
Sbjct: 196 WQDKVREAAGGA 207

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|176212 cd08250, Mgc45594_like, Mgc45594 gene product and other MDR family members

 Score = 55.3 bits (134), Expect = 1e-08
 Identities = 66/238 (27%), Positives = 94/238 (39%), Gaps = 55/238 (23%)

Query: 25  IQDVEVAPPQAMEVRIKIKYTSLCRTDL------YFWESKGQTPLFPRIFGHEAAGVVES 78
           I DV V  P   EV +K ++  +  +D+      Y     G  P F    G E  G V +
Sbjct: 20  IVDVPVPLPGPGEVLVKNRFVGINASDINFTAGRYD---PGVKPPFD--CGFEGVGEVVA 74

Query: 79  VGEGVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKI 138
           VGEGV+D +VGD V  +  G                         F+EY VV +     +
Sbjct: 75  VGEGVTDFKVGDAVATMSFG------------------------AFAEYQVVPARHAVPV 110

Query: 139 NPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVF-GLGAVGLAAAEGARIAGASRI 197
             L P + + +L  G+ T   A   V + + G +V V    G  G  A + A++AG   +
Sbjct: 111 PELKP-EVLPLLVSGL-TASIALEEVGEMKSGETVLVTAAAGGTGQFAVQLAKLAG-CHV 167

Query: 198 IGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQ-------EVIAEMTNGGVDRSVECTG 248
           IG   S ++ E  K  G          DRPI        EV+ +    GVD   E  G
Sbjct: 168 IGTCSSDEKAEFLKSLGC---------DRPINYKTEDLGEVLKKEYPKGVDVVYESVG 216

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329

>gnl|CDD|176236 cd08275, MDR3, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 55.3 bits (134), Expect = 1e-08
 Identities = 64/247 (25%), Positives = 96/247 (38%), Gaps = 62/247 (25%)

Query: 25  IQDVEVAPPQAMEVRIKIKYTSL------CRTDLYFWESKGQTPLFPRIFGHEAAGVVES 78
           ++   +  P + EVR++++   L       R  LY        P  P + G E AG VE+
Sbjct: 16  VEKEALPEPSSGEVRVRVEACGLNFADLMARQGLY-----DSAPKPPFVPGFECAGTVEA 70

Query: 79  VGEGVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKI 138
           VGEGV D +VGD V+ +           RF   G           ++E   V        
Sbjct: 71  VGEGVKDFKVGDRVMGL----------TRF--GG-----------YAEVVNV-------- 99

Query: 139 NPLAPLDKVCILSCGVS------------TGLGATLNVAKPERGSSVAVF-GLGAVGLAA 185
               P D+V  L  G+S            T   A   +     G SV V    G VGLAA
Sbjct: 100 ----PADQVFPLPDGMSFEEAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAAGGVGLAA 155

Query: 186 AEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVE 245
            +  +      ++G   +SK  E  K+ GVT  ++    D    E + +++  GVD  ++
Sbjct: 156 GQLCKTVPNVTVVGTASASK-HEALKENGVTHVIDYRTQD--YVEEVKKISPEGVDIVLD 212

Query: 246 CTGNIDN 252
             G  D 
Sbjct: 213 ALGGEDT 219

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176235 cd08274, MDR9, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 53.8 bits (130), Expect = 5e-08
 Identities = 61/252 (24%), Positives = 86/252 (34%), Gaps = 47/252 (18%)

Query: 26  QDVEVAPPQAMEVRIKIKYTSLCRTDLYF---WESK----------------GQTPL-FP 65
            DV V  P   EV I++    +  TD+     W S                     L FP
Sbjct: 19  DDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFP 78

Query: 66  RIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTST-- 123
           RI G +  G V +VGEGV    +G+ VL               SI   P +         
Sbjct: 79  RIQGADIVGRVVAVGEGVDTARIGERVL------------VDPSIRDPPEDDPADIDYIG 126

Query: 124 ------FSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFG 177
                 F+EYTVV +     +N      ++    C  ST     L  A    G +V V G
Sbjct: 127 SERDGGFAEYTVVPAENAYPVNSPLSDVELATFPCSYSTAEN-MLERAGVGAGETVLVTG 185

Query: 178 L-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMT 236
             G VG A  + A+  GA  +I V  ++K  E  +  G    +          + +    
Sbjct: 186 ASGGVGSALVQLAKRRGA-IVIAVAGAAKE-EAVRALGADTVILRDAPLLADAKALGG-- 241

Query: 237 NGGVDRSVECTG 248
              VD   +  G
Sbjct: 242 -EPVDVVADVVG 252

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 350

>gnl|CDD|214840 smart00829, PKS_ER, Enoylreductase

 Score = 52.8 bits (128), Expect = 6e-08
 Identities = 50/215 (23%), Positives = 74/215 (34%), Gaps = 52/215 (24%)

Query: 40  IKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGE 99
           I+++   L   D+    + G  P    + G E AGVV  VG GV+ L VGD V+      
Sbjct: 1   IEVRAAGLNFRDVLI--ALGLYP-GEAVLGGECAGVVTRVGPGVTGLAVGDRVM------ 51

Query: 100 CGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLG 159
                              L    F+   V  +  V  I      ++   +     T   
Sbjct: 52  ------------------GLAPGAFATRVVTDARLVVPIPDGWSFEEAATVPVVFLTAYY 93

Query: 160 ATLNVAKPERGSSVAVF-GLGAVGLAAAEGARIAGASRIIG-VDRSSKRFEEAKKFGV-- 215
           A +++A+   G SV +    G VG AA + AR  GA  +        KR +  +  G+  
Sbjct: 94  ALVDLARLRPGESVLIHAAAGGVGQAAIQLARHLGA-EVFATAGSPEKR-DFLRALGIPD 151

Query: 216 --------TDFVNTSEHDRPIQEVIAEMTNG-GVD 241
                     F           + I   T G GVD
Sbjct: 152 DHIFSSRDLSFA----------DEILRATGGRGVD 176

Enoylreductase in Polyketide synthases. Length = 287

>gnl|CDD|182130 PRK09880, PRK09880, L-idonate 5-dehydrogenase; Provisional

 Score = 52.4 bits (126), Expect = 1e-07
 Identities = 68/275 (24%), Positives = 116/275 (42%), Gaps = 30/275 (10%)

Query: 38  VRIKIKYTSLCRTDLYFWESKGQTPLF----PRIFGHEAAGVVESVGEGVSDLEVGDHVL 93
             ++I    +C +DL++++ +G+   F    P + GHE  G +       S L+ G  V 
Sbjct: 30  TLVQITRGGICGSDLHYYQ-EGKVGNFVIKAPMVLGHEVIGKIVHSDS--SGLKEGQTVA 86

Query: 94  PVFTGECGDCRHCRFSINGEPVN-HFLGTST--------FSEYTVVHSG-CVAKINPLAP 143
              +  CG C++C      +     F G++         F+ Y VV +  C+    P   
Sbjct: 87  INPSKPCGHCKYCLSHNENQCTTMRFFGSAMYFPHVDGGFTRYKVVDTAQCIPY--PEKA 144

Query: 144 LDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS 203
            +KV   +  ++  + A  + A   +G  V V G+G +G       +  GA+ I+  D S
Sbjct: 145 DEKVMAFAEPLAVAIHA-AHQAGDLQGKRVFVSGVGPIGCLIVAAVKTLGAAEIVCADVS 203

Query: 204 SKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDG 263
            +    A++ G    VN    +  +    AE   G  D S E +G+  ++ +  E V   
Sbjct: 204 PRSLSLAREMGADKLVNPQ--NDDLDHYKAE--KGYFDVSFEVSGHPSSINTCLE-VTRA 258

Query: 264 WGVAVLVGVPSKDAVFMTKPINVL--NERTLKGTF 296
            GV V VG+      F   P+  L   E +LKG+F
Sbjct: 259 KGVMVQVGMGGAPPEF---PMMTLIVKEISLKGSF 290

Length = 343

>gnl|CDD|176210 cd08248, RTN4I1, Human Reticulon 4 Interacting Protein 1

 Score = 49.5 bits (119), Expect = 1e-06
 Identities = 29/130 (22%), Positives = 40/130 (30%), Gaps = 44/130 (33%)

Query: 29  EVAPPQAM---EVRIKIKYTSLCRTD---------------LYFWESKGQTPLFPRIFGH 70
               P      +V IK+   S+   D                     K     FP   G 
Sbjct: 20  NARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFPLTLGR 79

Query: 71  EAAGVVESVGEGVSDLEVGDHV---LPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEY 127
           + +GVV  +G GV   E+GD V   +P +    G                     T +EY
Sbjct: 80  DCSGVVVDIGSGVKSFEIGDEVWGAVPPW--SQG---------------------THAEY 116

Query: 128 TVVHSGCVAK 137
            VV    V+K
Sbjct: 117 VVVPENEVSK 126

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 350

>gnl|CDD|176209 cd08247, AST1_like, AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast

 Score = 48.8 bits (117), Expect = 2e-06
 Identities = 55/235 (23%), Positives = 86/235 (36%), Gaps = 47/235 (20%)

Query: 37  EVRIKIKYTSLCRTDL-----YFWESKGQTPLFPRIFGHEAAGVVESVGEGV-SDLEVGD 90
           E+ +K+   +L   DL     Y +  K +     +  G + +GV+  VG  V S+ +VGD
Sbjct: 30  EIVVKVHAAALNPVDLKLYNSYTFHFKVK----EKGLGRDYSGVIVKVGSNVASEWKVGD 85

Query: 91  HVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCIL 150
            V       CG   H            + G  T S+Y +V      K +  +   K   +
Sbjct: 86  EV-------CGIYPHP-----------YGGQGTLSQYLLVD----PKKDKKSITRKPENI 123

Query: 151 S----CGVSTGLGATLNV-----AKPERGSSVAVFGLG-AVGLAAAEGA-RIAGASRIIG 199
           S          LG    +      K    S V V G   +VG  A + A        ++G
Sbjct: 124 SLEEAAAWPLVLGTAYQILEDLGQKLGPDSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVG 183

Query: 200 VDRSSKRFEEAKKFGVTDFVNTSEHDR--PIQEVI-AEMTNGGVDRSVECTGNID 251
              SS+  E  KK G   F++   H     ++ V+      G  D  ++C G  D
Sbjct: 184 TC-SSRSAELNKKLGADHFIDYDAHSGVKLLKPVLENVKGQGKFDLILDCVGGYD 237

This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 352

>gnl|CDD|176214 cd08252, AL_MDR, Arginate lyase and other MDR family members

 Score = 48.7 bits (117), Expect = 2e-06
 Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 5/86 (5%)

Query: 12 KAAVAWEAGK---PLIIQDVEVAPPQA--MEVRIKIKYTSLCRTDLYFWESKGQTPLFPR 66
          KA    +      P  + D+E+  P     ++ ++++  S+   D          P  P+
Sbjct: 2  KAIGFTQPLPITDPDSLIDIELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAPVPGQPK 61

Query: 67 IFGHEAAGVVESVGEGVSDLEVGDHV 92
          I G +A+GVVE+VG  V+  +VGD V
Sbjct: 62 ILGWDASGVVEAVGSEVTLFKVGDEV 87

This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 336

>gnl|CDD|234027 TIGR02824, quinone_pig3, putative NAD(P)H quinone oxidoreductase, PIG3 family

 Score = 46.1 bits (110), Expect = 1e-05
 Identities = 67/238 (28%), Positives = 94/238 (39%), Gaps = 37/238 (15%)

Query: 12  KAAVAWEAGKPLIIQDVEVAPPQ--AMEVRIKIKYTSLCRTDLYFWESKGQTPLFP---R 66
           KA    E G P ++  VEV  P   A EV I++    + R DL   +  G+ P  P    
Sbjct: 2   KAIEITEPGGPEVLVLVEVPLPVPKAGEVLIRVAAAGVNRPDLL--QRAGKYPPPPGASD 59

Query: 67  IFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSE 126
           I G E AG V +VGEGVS  +VGD V  +  G                         ++E
Sbjct: 60  ILGLEVAGEVVAVGEGVSRWKVGDRVCALVAG-----------------------GGYAE 96

Query: 127 YTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGA--VGLA 184
           Y  V +G V  +     L +   L     T           + G +V + G GA  +G  
Sbjct: 97  YVAVPAGQVLPVPEGLSLVEAAALPETFFTVWSNLFQRGGLKAGETVLIHG-GASGIGTT 155

Query: 185 AAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVD 241
           A + A+  GA R+     S ++    +  G    +N  E D    EV+   T G GVD
Sbjct: 156 AIQLAKAFGA-RVFTTAGSDEKCAACEALGADIAINYREEDFV--EVVKAETGGKGVD 210

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized [Unknown function, Enzymes of unknown specificity]. Length = 325

>gnl|CDD|176206 cd08244, MDR_enoyl_red, Possible enoyl reductase

 Score = 43.1 bits (102), Expect = 1e-04
 Identities = 58/236 (24%), Positives = 86/236 (36%), Gaps = 32/236 (13%)

Query: 13  AAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYF---WESKGQTPLFPRI 67
           A    E G P  L+ +DV    P   +VRI +    +   D      W      P  P +
Sbjct: 3   AIRLHEFGPPEVLVPEDVPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELPYV 62

Query: 68  FGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEY 127
            G E AGVV++VG GV    +G  V+   TG                         ++E 
Sbjct: 63  PGGEVAGVVDAVGPGVDPAWLGRRVV-AHTGR--------------------AGGGYAEL 101

Query: 128 TVVHSGCVAKINP-LAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAA 185
            V     +  +   L     V ++  G  T LG  L++A    G  V V    G +G   
Sbjct: 102 AVADVDSLHPVPDGLDLEAAVAVVHDGR-TALGL-LDLATLTPGDVVLVTAAAGGLGSLL 159

Query: 186 AEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVD 241
            + A+ AGA  ++G      +    +  G    V+ +  D P Q V   +  GGV 
Sbjct: 160 VQLAKAAGA-TVVGAAGGPAKTALVRALGADVAVDYTRPDWPDQ-VREALGGGGVT 213

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|176251 cd08291, ETR_like_1, 2-enoyl thioester reductase (ETR) like proteins, child 1

 Score = 41.4 bits (98), Expect = 4e-04
 Identities = 34/139 (24%), Positives = 49/139 (35%), Gaps = 42/139 (30%)

Query: 21  KPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL---FPRIFGHEAAGVVE 77
           K L + + EV  P   EV IK++   +  +DL F   KGQ       P   G E +G V 
Sbjct: 16  KELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGF--LKGQYGSTKALPVPPGFEGSGTVV 73

Query: 78  SVGEG-VSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVV------ 130
           + G G ++   +G  V     G  G                     T++EY V       
Sbjct: 74  AAGGGPLAQSLIGKRV-AFLAGSYG---------------------TYAEYAVADAQQCL 111

Query: 131 --------HSGCVAKINPL 141
                     G  + +NPL
Sbjct: 112 PLPDGVSFEQGASSFVNPL 130

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|225041 COG2130, COG2130, Putative NADP-dependent oxidoreductases [General function prediction only]

 Score = 40.7 bits (96), Expect = 7e-04
 Identities = 48/233 (20%), Positives = 86/233 (36%), Gaps = 42/233 (18%)

Query: 25  IQDVEVAPPQAMEVRIKIKYTSLCRTDLY--FWESKGQTPLFPRIFGHEAAGVVESVGEG 82
           +++V+V  P   +V ++  Y SL   D Y     S   +   P   G    G    V + 
Sbjct: 29  LEEVDVPEPGEGQVLLRTLYLSL---DPYMRGRMSDAPSYAPPVELGEVMVGGT--VAKV 83

Query: 83  VS----DLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKI 138
           V+      + GD V                          +G S + EY +     + K+
Sbjct: 84  VASNHPGFQPGDIV--------------------------VGVSGWQEYAISDGEGLRKL 117

Query: 139 NP-LAPL-DKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGAS 195
           +P  APL   + +L     T     L++ +P+ G +V V    GAVG    + A++ G  
Sbjct: 118 DPSPAPLSAYLGVLGMPGLTAYFGLLDIGQPKAGETVVVSAAAGAVGSVVGQIAKLKGC- 176

Query: 196 RIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG 248
           R++G+   +++ +   +    D            + + E    G+D   E  G
Sbjct: 177 RVVGIAGGAEKCDFLTEELGFDAG-IDYKAEDFAQALKEACPKGIDVYFENVG 228

Length = 340

>gnl|CDD|176208 cd08246, crotonyl_coA_red, crotonyl-CoA reductase

 Score = 40.5 bits (95), Expect = 0.001
 Identities = 47/179 (26%), Positives = 78/179 (43%), Gaps = 33/179 (18%)

Query: 67  IFGHEAAGVVESVGEGVSDLEVGDHVL---PVFTGECGDCRH--CRFS----INGEPVNH 117
           I G +A+G+V +VGEGV + +VGD V+    V+ G   +       F     I G   N+
Sbjct: 84  IGGSDASGIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRIWGYETNY 143

Query: 118 FLGTSTFSEYTVVHSG-CVAKINPLAPLDKVCILSCGVSTGLGATL---------NVAKP 167
                +F+++ +V +   + K   L+  +            +GAT          N  KP
Sbjct: 144 ----GSFAQFALVQATQLMPKPKHLSWEEAAAY------MLVGATAYRMLFGWNPNTVKP 193

Query: 168 ERGSSVAVFG-LGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHD 225
             G +V ++G  G +G  A + AR AGA   + V  S ++ E  +  G    +N  + D
Sbjct: 194 --GDNVLIWGASGGLGSMAIQLARAAGA-NPVAVVSSEEKAEYCRALGAEGVINRRDFD 249

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 393

>gnl|CDD|176190 cd05288, PGDH, Prostaglandin dehydrogenases

 Score = 40.2 bits (95), Expect = 0.001
 Identities = 50/189 (26%), Positives = 77/189 (40%), Gaps = 47/189 (24%)

Query: 25  IQDVEVAPPQAMEVRIKIKYTSLCRTDLY--FWESKGQTPLFP-RIFGHEAAG----VVE 77
           + +V +   +  EV ++  Y S+   D Y   W S  ++   P ++      G    VVE
Sbjct: 22  LVEVPLPELKDGEVLVRTLYLSV---DPYMRGWMSDAKSYSPPVQLGEPMRGGGVGEVVE 78

Query: 78  SVGEGVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVH-SGCVA 136
           S      D +VGD V                         FLG   + EY VV  +  + 
Sbjct: 79  S---RSPDFKVGDLVS-----------------------GFLG---WQEYAVVDGASGLR 109

Query: 137 KINPLAPLDKVCILS-CGVSTGLGA---TLNVAKPERGSSVAVFGL-GAVGLAAAEGARI 191
           K++P   L     L   G+ TGL A      + KP+ G +V V    GAVG    + A++
Sbjct: 110 KLDPSLGLPLSAYLGVLGM-TGLTAYFGLTEIGKPKPGETVVVSAAAGAVGSVVGQIAKL 168

Query: 192 AGASRIIGV 200
            GA R++G+
Sbjct: 169 LGA-RVVGI 176

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329

>gnl|CDD|130269 TIGR01202, bchC, 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase

 Score = 39.8 bits (93), Expect = 0.001
 Identities = 71/350 (20%), Positives = 117/350 (33%), Gaps = 86/350 (24%)

Query: 14  AVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCR-TDLYFWESKGQTPLFPR-----I 67
           A+       + +++V + PP   ++ ++I Y+ +   T+  FW   G  P FP      +
Sbjct: 4   AIVLSGPNQIELREVTLTPPSPGDLVVEIWYSGISTGTEKLFW--NGLMPPFPGMGYPLV 61

Query: 68  FGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEY 127
            G+E+ G V   G        GD V  V    C            E V    G ++    
Sbjct: 62  PGYESVGRVVEAGPDTGFR-PGDRVF-VPGSNCY-----------EDVRGLFGGASKRLV 108

Query: 128 TVVHSGCVAKINPLAPLDKVCILSCGVSTGL----GATLNVAKPERGSSVAVFGLGAVGL 183
           T     C   ++P   L     L    +T      GA + V          + G G +G 
Sbjct: 109 TPASRVCR--LDPA--LGPQGALLALAATARHAVAGAEVKVLP------DLIVGHGTLGR 158

Query: 184 AAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHD-RPIQEVIAEMTNGGVDR 242
             A   + AG S     + + +R + A  + V D       D R I +   +     +D 
Sbjct: 159 LLARLTKAAGGSPPAVWETNPRRRDGATGYEVLDPEKDPRRDYRAIYDASGDP--SLIDT 216

Query: 243 SVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKP 302
            V                    G  VL G       F T+P+N             ++ P
Sbjct: 217 LVRRLAK--------------GGEIVLAG-------FYTEPVNF------------DFVP 243

Query: 303 ---------------RTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAF 337
                            DL +V ++  +  L L+  ITH+ P S+  +A+
Sbjct: 244 AFMKEARLRIAAEWQPGDLHAVRELIESGALSLDGLITHQRPASDAAEAY 293

[Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll]. Length = 308

>gnl|CDD|176231 cd08270, MDR4, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 39.7 bits (93), Expect = 0.001
 Identities = 66/268 (24%), Positives = 93/268 (34%), Gaps = 64/268 (23%)

Query: 19  AGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVES 78
           A   L + +V    P   E  +++   SL R +L F     + P    + G +AAGVVE 
Sbjct: 10  APLRLRLGEVPDPQPAPHEALVRVAAISLNRGELKF---AAERPD-GAVPGWDAAGVVER 65

Query: 79  VGEGVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKI 138
                S   VG  V+                              ++E   V +G +A +
Sbjct: 66  AAADGSGPAVGARVVG-----------------------LGAMGAWAELVAVPTGWLAVL 102

Query: 139 NPLAPLDKVCILSCGVSTGLGATLNVA-----------KPERGSSVAVFGL-GAVGLAAA 186
                         GVS    ATL VA            P  G  V V G  G VG  A 
Sbjct: 103 PD------------GVSFAQAATLPVAGVTALRALRRGGPLLGRRVLVTGASGGVGRFAV 150

Query: 187 EGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC 246
           + A +AGA  ++ V  S  R E  ++ G  + V              E++   VD  V+ 
Sbjct: 151 QLAALAGA-HVVAVVGSPARAEGLRELGAAEVVVGGS----------ELSGAPVDLVVDS 199

Query: 247 TGNIDNMISAFECVHDGWGVAVLVGVPS 274
            G    +  A E +  G G  V VG  S
Sbjct: 200 VGG-PQLARALELLAPG-GTVVSVGSSS 225

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 305

>gnl|CDD|188164 TIGR01751, crot-CoA-red, crotonyl-CoA reductase

 Score = 38.6 bits (90), Expect = 0.004
 Identities = 41/170 (24%), Positives = 69/170 (40%), Gaps = 15/170 (8%)

Query: 67  IFGHEAAGVVESVGEGVSDLEVGDHVL---PVFTGECGDCRHC--RFSINGEPVNHFLGT 121
           I G +A+GVV  VG GV+  +VGD V+           D R      S       +    
Sbjct: 80  IIGSDASGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRDGDPMLSSEQRIWGYETNF 139

Query: 122 STFSEYTVVHSG-CVAKINPLAPLDKVCILSCGVSTG----LGATLNVAKPERGSSVAVF 176
            +F+E+ +V     + K   L   +  C    G +T     +G      KP  G +V ++
Sbjct: 140 GSFAEFALVKDYQLMPKPKHLTWEEAACPGLTG-ATAYRQLVGWNPAAVKP--GDNVLIW 196

Query: 177 GL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHD 225
           G  G +G  A + AR  G +  + V  S ++ E  +  G    ++ ++  
Sbjct: 197 GAAGGLGSYATQLARAGGGNP-VAVVSSPEKAEYCRSLGAEAVIDRNDFG 245

The enzyme modelled by This model is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae. Length = 398

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	354
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	100.0
COG1062	366	AdhC Zn-dependent alcohol dehydrogenases, class II	100.0
KOG0022	375	consensus Alcohol dehydrogenase, class III [Second	100.0
KOG0024	354	consensus Sorbitol dehydrogenase [Secondary metabo	100.0
PLN02740	381	Alcohol dehydrogenase-like	100.0
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	100.0
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	100.0
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	100.0
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	100.0
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	100.0
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	100.0
PLN02827	378	Alcohol dehydrogenase-like	100.0
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	100.0
cd08277	365	liver_alcohol_DH_like Liver alcohol dehydrogenase.	100.0
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	100.0
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	100.0
COG1063	350	Tdh Threonine dehydrogenase and related Zn-depende	100.0
TIGR02819	393	fdhA_non_GSH formaldehyde dehydrogenase, glutathio	100.0
KOG1197	336	consensus Predicted quinone oxidoreductase [Energy	100.0
PLN02586	360	probable cinnamyl alcohol dehydrogenase	100.0
PRK10309	347	galactitol-1-phosphate dehydrogenase; Provisional	100.0
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	100.0
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	100.0
PLN02178	375	cinnamyl-alcohol dehydrogenase	100.0
cd08299	373	alcohol_DH_class_I_II_IV class I, II, IV alcohol d	100.0
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	100.0
TIGR02822	329	adh_fam_2 zinc-binding alcohol dehydrogenase famil	100.0
PLN02514	357	cinnamyl-alcohol dehydrogenase	100.0
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	100.0
cd08278	365	benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Be	100.0
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	100.0
cd05279	365	Zn_ADH1 Liver alcohol dehydrogenase and related zi	100.0
cd08237	341	ribitol-5-phosphate_DH ribitol-5-phosphate dehydro	100.0
cd08285	351	NADP_ADH NADP(H)-dependent alcohol dehydrogenases.	100.0
cd08279	363	Zn_ADH_class_III Class III alcohol dehydrogenase.	100.0
TIGR01202	308	bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyl	100.0
PRK10083	339	putative oxidoreductase; Provisional	100.0
cd08296	333	CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci	100.0
cd08283	386	FDH_like_1 Glutathione-dependent formaldehyde dehy	100.0
cd08256	350	Zn_ADH2 Alcohol dehydrogenases of the MDR family.	100.0
cd05278	347	FDH_like Formaldehyde dehydrogenases. Formaldehyde	100.0
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	100.0
cd08263	367	Zn_ADH10 Alcohol dehydrogenases of the MDR family.	100.0
cd08286	345	FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-lik	100.0
cd05284	340	arabinose_DH_like D-arabinose dehydrogenase. This	100.0
cd08240	350	6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehy	100.0
cd08260	345	Zn_ADH6 Alcohol dehydrogenases of the MDR family.	100.0
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	100.0
PLN02702	364	L-idonate 5-dehydrogenase	100.0
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	100.0
cd08284	344	FDH_like_2 Glutathione-dependent formaldehyde dehy	100.0
cd08262	341	Zn_ADH8 Alcohol dehydrogenases of the MDR family.	100.0
PRK05396	341	tdh L-threonine 3-dehydrogenase; Validated	100.0
cd08235	343	iditol_2_DH_like L-iditol 2-dehydrogenase. Putativ	100.0
cd08282	375	PFDH_like Pseudomonas putida aldehyde-dismutating	100.0
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	100.0
cd08261	337	Zn_ADH7 Alcohol dehydrogenases of the MDR family.	100.0
cd08287	345	FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-lik	100.0
cd08265	384	Zn_ADH3 Alcohol dehydrogenases of the MDR family.	100.0
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	100.0
cd08242	319	MDR_like Medium chain dehydrogenases/reductase (MD	100.0
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	100.0
cd05283	337	CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnam	100.0
PRK09422	338	ethanol-active dehydrogenase/acetaldehyde-active r	100.0
PRK13771	334	putative alcohol dehydrogenase; Provisional	100.0
cd05285	343	sorbitol_DH Sorbitol dehydrogenase. Sorbitol and a	100.0
cd08254	338	hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carbo	100.0
cd05281	341	TDH Threonine dehydrogenase. L-threonine dehydroge	100.0
cd08236	343	sugar_DH NAD(P)-dependent sugar dehydrogenases. Th	100.0
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	100.0
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	100.0
cd08232	339	idonate-5-DH L-idonate 5-dehydrogenase. L-idonate	100.0
KOG0025	354	consensus Zn2+-binding dehydrogenase (nuclear rece	100.0
TIGR00692	340	tdh L-threonine 3-dehydrogenase. E. coli His-90 mo	100.0
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	100.0
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	100.0
cd08234	334	threonine_DH_like L-threonine dehydrogenase. L-thr	100.0
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	100.0
cd08274	350	MDR9 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	100.0
TIGR02817	336	adh_fam_1 zinc-binding alcohol dehydrogenase famil	100.0
cd08264	325	Zn_ADH_like2 Alcohol dehydrogenases of the MDR fam	100.0
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	100.0
PRK10754	327	quinone oxidoreductase, NADPH-dependent; Provision	100.0
cd08298	329	CAD2 Cinnamyl alcohol dehydrogenases (CAD). These	100.0
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	100.0
cd08245	330	CAD Cinnamyl alcohol dehydrogenases (CAD) and rela	100.0
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	100.0
cd08276	336	MDR7 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	100.0
cd08258	306	Zn_ADH4 Alcohol dehydrogenases of the MDR family.	100.0
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	100.0
PTZ00354	334	alcohol dehydrogenase; Provisional	100.0
cd08249	339	enoyl_reductase_like enoyl_reductase_like. Member	100.0
cd05280	325	MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone	100.0
cd08270	305	MDR4 Medium chain dehydrogenases/reductase (MDR)/z	100.0
COG2130	340	Putative NADP-dependent oxidoreductases [General f	100.0
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	100.0
cd08269	312	Zn_ADH9 Alcohol dehydrogenases of the MDR family.	100.0
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	100.0
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	100.0
cd08252	336	AL_MDR Arginate lyase and other MDR family members	100.0
TIGR02823	323	oxido_YhdH putative quinone oxidoreductase, YhdH/Y	100.0
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	100.0
cd08288	324	MDR_yhdh Yhdh putative quinone oxidoreductases. Yh	100.0
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	100.0
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	100.0
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	100.0
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	100.0
cd08247	352	AST1_like AST1 is a cytoplasmic protein associated	100.0
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	100.0
cd08271	325	MDR5 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08273	331	MDR8 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08272	326	MDR6 Medium chain dehydrogenases/reductase (MDR)/z	100.0
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	100.0
cd08251	303	polyketide_synthase polyketide synthase. Polyketid	100.0
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd05289	309	MDR_like_2 alcohol dehydrogenase and quinone reduc	100.0
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	100.0
cd08275	337	MDR3 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08267	319	MDR1 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd05195	293	enoyl_red enoyl reductase of polyketide synthase.	100.0
smart00829	288	PKS_ER Enoylreductase. Enoylreductase in Polyketid	100.0
cd08255	277	2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_	99.97
KOG1196	343	consensus Predicted NAD-dependent oxidoreductase [	99.97
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	99.96
PF08240	109	ADH_N: Alcohol dehydrogenase GroES-like domain; In	99.88
PF00107	130	ADH_zinc_N: Zinc-binding dehydrogenase; InterPro:	99.76
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	99.53
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	99.43
PF13602	127	ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQ	99.26
PRK11873	272	arsM arsenite S-adenosylmethyltransferase; Reviewe	98.79
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	98.71
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	98.52
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	98.5
TIGR00936	406	ahcY adenosylhomocysteinase. This enzyme hydrolyze	98.35
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	98.34
PRK00517	250	prmA ribosomal protein L11 methyltransferase; Revi	98.34
PRK08306	296	dipicolinate synthase subunit A; Reviewed	98.33
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	98.29
PF11017	314	DUF2855: Protein of unknown function (DUF2855); In	98.28
PLN02494	477	adenosylhomocysteinase	98.26
COG2518	209	Pcm Protein-L-isoaspartate carboxylmethyltransfera	98.21
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	98.01
PTZ00075	476	Adenosylhomocysteinase; Provisional	97.94
PRK08324	681	short chain dehydrogenase; Validated	97.93
PRK12771	564	putative glutamate synthase (NADPH) small subunit;	97.9
COG2242	187	CobL Precorrin-6B methylase 2 [Coenzyme metabolism	97.9
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	97.8
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	97.75
TIGR00406	288	prmA ribosomal protein L11 methyltransferase. Ribo	97.73
PRK13943	322	protein-L-isoaspartate O-methyltransferase; Provis	97.69
PRK00377	198	cbiT cobalt-precorrin-6Y C(15)-methyltransferase;	97.67
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	97.66
PRK11705	383	cyclopropane fatty acyl phospholipid synthase; Pro	97.61
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	97.56
PF01135	209	PCMT: Protein-L-isoaspartate(D-aspartate) O-methyl	97.56
PRK06182	273	short chain dehydrogenase; Validated	97.45
COG2230	283	Cfa Cyclopropane fatty acid synthase and related m	97.43
PRK05693	274	short chain dehydrogenase; Provisional	97.43
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.4
PRK13942	212	protein-L-isoaspartate O-methyltransferase; Provis	97.4
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	97.37
PF02353	273	CMAS: Mycolic acid cyclopropane synthetase; InterP	97.35
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	97.35
PRK13944	205	protein-L-isoaspartate O-methyltransferase; Provis	97.33
TIGR02469	124	CbiT precorrin-6Y C5,15-methyltransferase (decarbo	97.32
PRK12742	237	oxidoreductase; Provisional	97.31
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	97.31
PRK05993	277	short chain dehydrogenase; Provisional	97.3
PRK14967	223	putative methyltransferase; Provisional	97.27
TIGR00438	188	rrmJ cell division protein FtsJ.	97.24
PLN03209	576	translocon at the inner envelope of chloroplast su	97.19
PRK00107	187	gidB 16S rRNA methyltransferase GidB; Reviewed	97.19
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	97.17
PRK07326	237	short chain dehydrogenase; Provisional	97.14
PF12847	112	Methyltransf_18: Methyltransferase domain; PDB: 3G	97.13
PRK00536	262	speE spermidine synthase; Provisional	97.1
TIGR00080	215	pimt protein-L-isoaspartate(D-aspartate) O-methylt	97.09
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	97.09
PRK12828	239	short chain dehydrogenase; Provisional	97.08
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	97.06
PRK08017	256	oxidoreductase; Provisional	97.01
PRK13940	414	glutamyl-tRNA reductase; Provisional	97.01
COG4122	219	Predicted O-methyltransferase [General function pr	96.98
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	96.98
COG0300	265	DltE Short-chain dehydrogenases of various substra	96.93
PF01262	168	AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal	96.92
PRK04148	134	hypothetical protein; Provisional	96.92
COG0686	371	Ald Alanine dehydrogenase [Amino acid transport an	96.91
PRK07060	245	short chain dehydrogenase; Provisional	96.9
PRK06139	330	short chain dehydrogenase; Provisional	96.87
PRK08177	225	short chain dehydrogenase; Provisional	96.87
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	96.86
PRK07806	248	short chain dehydrogenase; Provisional	96.86
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.86
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.85
PRK08628	258	short chain dehydrogenase; Provisional	96.81
PRK08265	261	short chain dehydrogenase; Provisional	96.81
PLN02366	308	spermidine synthase	96.78
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	96.78
PRK06953	222	short chain dehydrogenase; Provisional	96.77
PRK06057	255	short chain dehydrogenase; Provisional	96.76
PRK07402	196	precorrin-6B methylase; Provisional	96.75
COG2226	238	UbiE Methylase involved in ubiquinone/menaquinone	96.75
PRK03369	488	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.75
PRK12939	250	short chain dehydrogenase; Provisional	96.72
CHL00194	317	ycf39 Ycf39; Provisional	96.7
COG0421	282	SpeE Spermidine synthase [Amino acid transport and	96.69
PRK06949	258	short chain dehydrogenase; Provisional	96.69
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	96.68
PRK00811	283	spermidine synthase; Provisional	96.67
PRK07109	334	short chain dehydrogenase; Provisional	96.67
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	96.65
TIGR01318	467	gltD_gamma_fam glutamate synthase small subunit fa	96.64
PLN03075	296	nicotianamine synthase; Provisional	96.63
PRK07831	262	short chain dehydrogenase; Provisional	96.62
PRK12829	264	short chain dehydrogenase; Provisional	96.62
PRK07576	264	short chain dehydrogenase; Provisional	96.62
PRK08267	260	short chain dehydrogenase; Provisional	96.61
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	96.61
PLN02780	320	ketoreductase/ oxidoreductase	96.6
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	96.6
PRK06719	157	precorrin-2 dehydrogenase; Validated	96.6
PF06325	295	PrmA: Ribosomal protein L11 methyltransferase (Prm	96.6
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	96.6
PRK07814	263	short chain dehydrogenase; Provisional	96.58
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	96.57
PLN02781	234	Probable caffeoyl-CoA O-methyltransferase	96.57
PRK05872	296	short chain dehydrogenase; Provisional	96.55
PRK12809	639	putative oxidoreductase Fe-S binding subunit; Revi	96.55
COG2519	256	GCD14 tRNA(1-methyladenosine) methyltransferase an	96.55
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	96.53
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	96.51
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	96.51
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	96.5
PRK06180	277	short chain dehydrogenase; Provisional	96.49
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	96.49
PRK08339	263	short chain dehydrogenase; Provisional	96.49
PRK01581	374	speE spermidine synthase; Validated	96.47
PLN02476	278	O-methyltransferase	96.47
COG2227	243	UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-	96.47
PRK04457	262	spermidine synthase; Provisional	96.45
PRK07825	273	short chain dehydrogenase; Provisional	96.45
PRK09186	256	flagellin modification protein A; Provisional	96.45
PRK06398	258	aldose dehydrogenase; Validated	96.42
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	96.4
PRK05867	253	short chain dehydrogenase; Provisional	96.4
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.39
PRK07774	250	short chain dehydrogenase; Provisional	96.37
PRK11207	197	tellurite resistance protein TehB; Provisional	96.36
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	96.35
PRK06196	315	oxidoreductase; Provisional	96.35
PRK09072	263	short chain dehydrogenase; Provisional	96.35
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.34
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	96.34
PRK06128	300	oxidoreductase; Provisional	96.34
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.33
PRK12769	654	putative oxidoreductase Fe-S binding subunit; Revi	96.32
PRK06841	255	short chain dehydrogenase; Provisional	96.31
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	96.3
PRK09291	257	short chain dehydrogenase; Provisional	96.29
COG3288	356	PntA NAD/NADP transhydrogenase alpha subunit [Ener	96.28
PRK08703	239	short chain dehydrogenase; Provisional	96.28
PRK05866	293	short chain dehydrogenase; Provisional	96.27
PRK06484	520	short chain dehydrogenase; Validated	96.26
PRK07502	307	cyclohexadienyl dehydrogenase; Validated	96.25
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.24
PRK08263	275	short chain dehydrogenase; Provisional	96.23
TIGR00138	181	gidB 16S rRNA methyltransferase GidB. GidB (glucos	96.23
PRK07454	241	short chain dehydrogenase; Provisional	96.23
PRK07832	272	short chain dehydrogenase; Provisional	96.22
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	96.22
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.21
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.2
PRK06483	236	dihydromonapterin reductase; Provisional	96.2
COG2264	300	PrmA Ribosomal protein L11 methylase [Translation,	96.19
PRK06500	249	short chain dehydrogenase; Provisional	96.19
PRK00312	212	pcm protein-L-isoaspartate O-methyltransferase; Re	96.18
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	96.17
PRK07062	265	short chain dehydrogenase; Provisional	96.17
PRK07024	257	short chain dehydrogenase; Provisional	96.17
PRK08618	325	ornithine cyclodeaminase; Validated	96.15
PRK07890	258	short chain dehydrogenase; Provisional	96.15
PRK08317	241	hypothetical protein; Provisional	96.14
PRK15116	268	sulfur acceptor protein CsdL; Provisional	96.14
PLN02823	336	spermine synthase	96.12
PRK08589	272	short chain dehydrogenase; Validated	96.1
PRK06482	276	short chain dehydrogenase; Provisional	96.1
PRK07677	252	short chain dehydrogenase; Provisional	96.1
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	96.1
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	96.09
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	96.09
PRK07478	254	short chain dehydrogenase; Provisional	96.07
PRK01683	258	trans-aconitate 2-methyltransferase; Provisional	96.06
PRK07574	385	formate dehydrogenase; Provisional	96.06
PRK05854	313	short chain dehydrogenase; Provisional	96.05
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	96.05
PRK08862	227	short chain dehydrogenase; Provisional	96.05
PRK08287	187	cobalt-precorrin-6Y C(15)-methyltransferase; Valid	96.04
PRK07523	255	gluconate 5-dehydrogenase; Provisional	96.04
PRK00121	202	trmB tRNA (guanine-N(7)-)-methyltransferase; Revie	96.03
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	96.03
PRK06179	270	short chain dehydrogenase; Provisional	96.03
PRK06172	253	short chain dehydrogenase; Provisional	96.03
TIGR03840	213	TMPT_Se_Te thiopurine S-methyltransferase, Se/Te d	96.02
PRK08213	259	gluconate 5-dehydrogenase; Provisional	96.02
PRK08264	238	short chain dehydrogenase; Validated	96.02
COG0569	225	TrkA K+ transport systems, NAD-binding component [	96.01
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	96.01
PRK14103	255	trans-aconitate 2-methyltransferase; Provisional	96.0
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	96.0
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	96.0
PRK06194	287	hypothetical protein; Provisional	96.0
PRK05884	223	short chain dehydrogenase; Provisional	95.99
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	95.98
PRK06138	252	short chain dehydrogenase; Provisional	95.97
PRK08643	256	acetoin reductase; Validated	95.96
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	95.96
PLN00203	519	glutamyl-tRNA reductase	95.94
KOG0725	270	consensus Reductases with broad range of substrate	95.93
PLN02253	280	xanthoxin dehydrogenase	95.93
PRK07453	322	protochlorophyllide oxidoreductase; Validated	95.92
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	95.92
PRK07063	260	short chain dehydrogenase; Provisional	95.91
PRK07904	253	short chain dehydrogenase; Provisional	95.91
PRK05717	255	oxidoreductase; Validated	95.9
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	95.9
PRK08226	263	short chain dehydrogenase; Provisional	95.9
PRK06701	290	short chain dehydrogenase; Provisional	95.9
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	95.89
PRK07035	252	short chain dehydrogenase; Provisional	95.89
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	95.88
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	95.88
TIGR00417	270	speE spermidine synthase. the SpeE subunit of sper	95.87
PRK07856	252	short chain dehydrogenase; Provisional	95.87
PRK12367	245	short chain dehydrogenase; Provisional	95.87
PLN02244	340	tocopherol O-methyltransferase	95.87
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	95.86
PF02670	129	DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate re	95.86
PRK12937	245	short chain dehydrogenase; Provisional	95.86
PRK06181	263	short chain dehydrogenase; Provisional	95.85
TIGR03215	285	ac_ald_DH_ac acetaldehyde dehydrogenase (acetylati	95.85
PRK05876	275	short chain dehydrogenase; Provisional	95.83
PF01408	120	GFO_IDH_MocA: Oxidoreductase family, NAD-binding R	95.83
PRK12548	289	shikimate 5-dehydrogenase; Provisional	95.83
PRK10538	248	malonic semialdehyde reductase; Provisional	95.81
PRK06197	306	short chain dehydrogenase; Provisional	95.81
PRK08340	259	glucose-1-dehydrogenase; Provisional	95.8
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	95.8
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	95.79
PRK05875	276	short chain dehydrogenase; Provisional	95.79
PRK07985	294	oxidoreductase; Provisional	95.77
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	95.77
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	95.77
PLN03139	386	formate dehydrogenase; Provisional	95.76
PRK07067	257	sorbitol dehydrogenase; Provisional	95.76
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	95.76
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	95.76
PRK06198	260	short chain dehydrogenase; Provisional	95.75
PRK07577	234	short chain dehydrogenase; Provisional	95.75
PRK08219	227	short chain dehydrogenase; Provisional	95.75
PRK05562	223	precorrin-2 dehydrogenase; Provisional	95.72
PTZ00098	263	phosphoethanolamine N-methyltransferase; Provision	95.72
PRK06940	275	short chain dehydrogenase; Provisional	95.72
PRK10669	558	putative cation:proton antiport protein; Provision	95.71
PLN02589	247	caffeoyl-CoA O-methyltransferase	95.7
TIGR00563	426	rsmB ribosomal RNA small subunit methyltransferase	95.7
PRK06125	259	short chain dehydrogenase; Provisional	95.69
PRK11036	255	putative S-adenosyl-L-methionine-dependent methylt	95.68
PRK08277	278	D-mannonate oxidoreductase; Provisional	95.68
PRK06720	169	hypothetical protein; Provisional	95.67
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	95.67
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	95.66
PRK06914	280	short chain dehydrogenase; Provisional	95.66
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	95.66
TIGR00477	195	tehB tellurite resistance protein TehB. Part of a	95.65
PRK06114	254	short chain dehydrogenase; Provisional	95.64
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	95.64
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	95.64
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	95.64
PRK08251	248	short chain dehydrogenase; Provisional	95.63
PRK07074	257	short chain dehydrogenase; Provisional	95.63
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	95.63
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	95.63
PRK06124	256	gluconate 5-dehydrogenase; Provisional	95.63
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	95.62
PRK08085	254	gluconate 5-dehydrogenase; Provisional	95.62
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	95.61
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	95.61
PRK03562	621	glutathione-regulated potassium-efflux system prot	95.61
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	95.6
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	95.59
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.57
PRK09242	257	tropinone reductase; Provisional	95.57
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	95.56
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	95.56
PRK10258	251	biotin biosynthesis protein BioC; Provisional	95.55
PRK04266	226	fibrillarin; Provisional	95.54
PF01596	205	Methyltransf_3: O-methyltransferase; InterPro: IPR	95.54
PRK08328	231	hypothetical protein; Provisional	95.53
PRK13243	333	glyoxylate reductase; Reviewed	95.51
PRK07340	304	ornithine cyclodeaminase; Validated	95.51
COG2910	211	Putative NADH-flavin reductase [General function p	95.5
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	95.5
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.49
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	95.49
PRK08223	287	hypothetical protein; Validated	95.48
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	95.48
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	95.47
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	95.47
PF08704	247	GCD14: tRNA methyltransferase complex GCD14 subuni	95.46
PRK08300	302	acetaldehyde dehydrogenase; Validated	95.44
TIGR02752	231	MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone me	95.41
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.4
PRK05447	385	1-deoxy-D-xylulose 5-phosphate reductoisomerase; P	95.4
PRK12746	254	short chain dehydrogenase; Provisional	95.39
COG1179	263	Dinucleotide-utilizing enzymes involved in molybdo	95.39
PRK03659	601	glutathione-regulated potassium-efflux system prot	95.39
TIGR00452	314	methyltransferase, putative. Known examples to dat	95.38
PLN02928	347	oxidoreductase family protein	95.37
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.35
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.35
PRK06101	240	short chain dehydrogenase; Provisional	95.34
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	95.32
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	95.32
PRK07097	265	gluconate 5-dehydrogenase; Provisional	95.27
PF02558	151	ApbA: Ketopantoate reductase PanE/ApbA; InterPro:	95.27
PRK11088	272	rrmA 23S rRNA methyltransferase A; Provisional	95.27
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	95.24
PF01564	246	Spermine_synth: Spermine/spermidine synthase; Inte	95.24
COG0673	342	MviM Predicted dehydrogenases and related proteins	95.23
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	95.23
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	95.23
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	95.23
smart00846	149	Gp_dh_N Glyceraldehyde 3-phosphate dehydrogenase,	95.23
TIGR01532	325	E4PD_g-proteo D-erythrose-4-phosphate dehydrogenas	95.22
PRK03612	521	spermidine synthase; Provisional	95.22
PRK08278	273	short chain dehydrogenase; Provisional	95.21
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	95.19
PRK14903	431	16S rRNA methyltransferase B; Provisional	95.18
PRK08303	305	short chain dehydrogenase; Provisional	95.17
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	95.16
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	95.16
PRK06484	520	short chain dehydrogenase; Validated	95.15
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	95.15
PRK06523	260	short chain dehydrogenase; Provisional	95.14
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	95.14
PRK05708	305	2-dehydropantoate 2-reductase; Provisional	95.13
PRK14618	328	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	95.13
PRK12747	252	short chain dehydrogenase; Provisional	95.12
COG1648	210	CysG Siroheme synthase (precorrin-2 oxidase/ferroc	95.11
TIGR01505	291	tartro_sem_red 2-hydroxy-3-oxopropionate reductase	95.08
PLN02233	261	ubiquinone biosynthesis methyltransferase	95.07
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	95.06
PRK07791	286	short chain dehydrogenase; Provisional	95.06
PRK07102	243	short chain dehydrogenase; Provisional	95.05
PRK12480	330	D-lactate dehydrogenase; Provisional	95.0
PF01210	157	NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate	94.99
PRK14902	444	16S rRNA methyltransferase B; Provisional	94.98
PF01209	233	Ubie_methyltran: ubiE/COQ5 methyltransferase famil	94.97
PLN02256	304	arogenate dehydrogenase	94.96
PRK12743	256	oxidoreductase; Provisional	94.94
PF13659	117	Methyltransf_26: Methyltransferase domain; PDB: 3G	94.91
PRK12814	652	putative NADPH-dependent glutamate synthase small	94.88
PRK06522	304	2-dehydropantoate 2-reductase; Reviewed	94.88
PLN02490	340	MPBQ/MSBQ methyltransferase	94.87
PRK13255	218	thiopurine S-methyltransferase; Reviewed	94.86
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.86
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	94.85
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	94.81
PLN02336	475	phosphoethanolamine N-methyltransferase	94.81
PRK12779	944	putative bifunctional glutamate synthase subunit b	94.8
PRK11188	209	rrmJ 23S rRNA methyltransferase J; Provisional	94.8
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	94.78
PRK11064	415	wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro	94.77
PRK11559	296	garR tartronate semialdehyde reductase; Provisiona	94.76
PRK07417	279	arogenate dehydrogenase; Reviewed	94.76
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	94.74
PRK13984	604	putative oxidoreductase; Provisional	94.73
PRK13403	335	ketol-acid reductoisomerase; Provisional	94.72
PRK00216	239	ubiE ubiquinone/menaquinone biosynthesis methyltra	94.72
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	94.72
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.71
PRK14982	340	acyl-ACP reductase; Provisional	94.71
PRK09135	249	pteridine reductase; Provisional	94.7
TIGR00091	194	tRNA (guanine-N(7)-)-methyltransferase. In E. coli	94.68
PRK05650	270	short chain dehydrogenase; Provisional	94.67
PRK15451	247	tRNA cmo(5)U34 methyltransferase; Provisional	94.65
TIGR00446	264	nop2p NOL1/NOP2/sun family putative RNA methylase.	94.64
PRK12938	246	acetyacetyl-CoA reductase; Provisional	94.63
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.63
PRK09496	453	trkA potassium transporter peripheral membrane com	94.62
TIGR02415	254	23BDH acetoin reductases. One member of this famil	94.61
PRK06436	303	glycerate dehydrogenase; Provisional	94.6
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.6
PRK10901	427	16S rRNA methyltransferase B; Provisional	94.59
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	94.59
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	94.58
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	94.54

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=100.00  E-value=8e-66  Score=447.86  Aligned_cols=331  Identities=33%  Similarity=0.522  Sum_probs=295.8

Q ss_pred             chhcceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCC
Q 018529            8 ILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLE   87 (354)
Q Consensus         8 ~~~~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   87 (354)
                      +++|||+.+.++++++++.+++.|+|+++||+|+|+|||+|++|++.++|..+...+|++||||++|+|+++|++|++|+
T Consensus         1 ~~~mkA~~~~~~~~pl~i~e~~~p~p~~~eVlI~v~~~GVChsDlH~~~G~~~~~~~P~ipGHEivG~V~~vG~~V~~~k   80 (339)
T COG1064           1 MMTMKAAVLKKFGQPLEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPVPKLPLIPGHEIVGTVVEVGEGVTGLK   80 (339)
T ss_pred             CcceEEEEEccCCCCceEEeccCCCCCCCeEEEEEEEEeecchhhhhhcCCCCCCCCCccCCcceEEEEEEecCCCccCC
Confidence            57999999999999999999999999999999999999999999999999998888999999999999999999999999


Q ss_pred             CCCEEEe-cccCCCCCCcccccCCCC----CCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhh
Q 018529           88 VGDHVLP-VFTGECGDCRHCRFSING----EPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATL  162 (354)
Q Consensus        88 ~Gd~V~~-~~~~~~~~c~~c~~~~~~----~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~  162 (354)
                      +||||.+ ++..+|++|.+|+.+.-.    ....++..+|+||||+++|+.+++++|+++++++||.+.|+..|.|++| 
T Consensus        81 ~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~~gy~~~GGyaeyv~v~~~~~~~iP~~~d~~~aApllCaGiT~y~al-  159 (339)
T COG1064          81 VGDRVGVGWLVISCGECEYCRSGNENLCPNQKITGYTTDGGYAEYVVVPARYVVKIPEGLDLAEAAPLLCAGITTYRAL-  159 (339)
T ss_pred             CCCEEEecCccCCCCCCccccCcccccCCCccccceeecCcceeEEEEchHHeEECCCCCChhhhhhhhcCeeeEeeeh-
Confidence            9999987 999999999999866422    3456667779999999999999999999999999999999999999996 


Q ss_pred             hhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccE
Q 018529          163 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDR  242 (354)
Q Consensus       163 ~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dv  242 (354)
                      +..+++||++|+|+|+|++|.+++|+|+++|+ +|++++++++|++++++||++++++..+.  +..+.+++.    +|+
T Consensus       160 k~~~~~pG~~V~I~G~GGlGh~avQ~Aka~ga-~Via~~~~~~K~e~a~~lGAd~~i~~~~~--~~~~~~~~~----~d~  232 (339)
T COG1064         160 KKANVKPGKWVAVVGAGGLGHMAVQYAKAMGA-EVIAITRSEEKLELAKKLGADHVINSSDS--DALEAVKEI----ADA  232 (339)
T ss_pred             hhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-eEEEEeCChHHHHHHHHhCCcEEEEcCCc--hhhHHhHhh----CcE
Confidence            56999999999999999999999999999998 99999999999999999999999998733  366666654    999


Q ss_pred             EEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhh-hccccEEEEEeccCCCCCCCHHHHHHHHHccCCCCC
Q 018529          243 SVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELE  321 (354)
Q Consensus       243 v~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  321 (354)
                      ++|+++ +..++.+++.|+++ |+++++|.........++... +.+++++.|+..++.   .++++++++..++++++.
T Consensus       233 ii~tv~-~~~~~~~l~~l~~~-G~~v~vG~~~~~~~~~~~~~~li~~~~~i~GS~~g~~---~d~~e~l~f~~~g~Ikp~  307 (339)
T COG1064         233 IIDTVG-PATLEPSLKALRRG-GTLVLVGLPGGGPIPLLPAFLLILKEISIVGSLVGTR---ADLEEALDFAAEGKIKPE  307 (339)
T ss_pred             EEECCC-hhhHHHHHHHHhcC-CEEEEECCCCCcccCCCCHHHhhhcCeEEEEEecCCH---HHHHHHHHHHHhCCceee
Confidence            999999 79999999999998 999999988422223343443 449999999987653   689999999999977765


Q ss_pred             CceeeeeccccHHHHHHHHhcCCc-eeEEEecC
Q 018529          322 KFITHRIPFSEINKAFEYMVKGEG-LRCIISME  353 (354)
Q Consensus       322 ~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~~~  353 (354)
                        +.+.++++|+++|++.|.+++. +|.||++.
T Consensus       308 --i~e~~~l~~in~A~~~m~~g~v~gR~Vi~~~  338 (339)
T COG1064         308 --ILETIPLDEINEAYERMEKGKVRGRAVIDMS  338 (339)
T ss_pred             --EEeeECHHHHHHHHHHHHcCCeeeEEEecCC
Confidence              4479999999999999999986 69999875

>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

Probab=100.00  E-value=3.3e-64  Score=427.74  Aligned_cols=341  Identities=48%  Similarity=0.866  Sum_probs=319.5

Q ss_pred             hhcceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCCC
Q 018529            9 LTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEV   88 (354)
Q Consensus         9 ~~~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~   88 (354)
                      |++||.+.+++++|++++++++++|++|||+||+.|+|+|++|.....|..+.. +|.++|||++|+|++||+.|+++++
T Consensus         1 mk~~aAV~~~~~~Pl~i~ei~l~~P~~gEVlVri~AtGVCHTD~~~~~G~~p~~-~P~vLGHEgAGiVe~VG~gVt~vkp   79 (366)
T COG1062           1 MKTRAAVAREAGKPLEIEEVDLDPPRAGEVLVRITATGVCHTDAHTLSGDDPEG-FPAVLGHEGAGIVEAVGEGVTSVKP   79 (366)
T ss_pred             CCceEeeeecCCCCeEEEEEecCCCCCCeEEEEEEEeeccccchhhhcCCCCCC-CceecccccccEEEEecCCccccCC
Confidence            578999999999999999999999999999999999999999999999988876 9999999999999999999999999


Q ss_pred             CCEEEecccCCCCCCcccccCCC-------------------------CCCcccccccccceeeEEeeccceEECCCCCC
Q 018529           89 GDHVLPVFTGECGDCRHCRFSIN-------------------------GEPVNHFLGTSTFSEYTVVHSGCVAKINPLAP  143 (354)
Q Consensus        89 Gd~V~~~~~~~~~~c~~c~~~~~-------------------------~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~  143 (354)
                      ||+|+..+.-.|++|.+|..+.+                         +...+++.+.++|+||..+++..++++++..+
T Consensus        80 GDhVI~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m~dGttrls~~~~~~~h~lG~stFa~y~vv~~~s~vki~~~~p  159 (366)
T COG1062          80 GDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVKIDPDAP  159 (366)
T ss_pred             CCEEEEcccCCCCCCchhhCCCcccccchhhhcccccccCCceeeecCCcceeeeeccccchhheeecccceEECCCCCC
Confidence            99999999999999999954322                         12335667778999999999999999999999


Q ss_pred             ccchhhcccchhhhhhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCC
Q 018529          144 LDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE  223 (354)
Q Consensus       144 ~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~  223 (354)
                      ++.++.+.|.+.|.+.+..+.+++++|++|.|+|.|++|++++|-|+..|+.++|+++.+++|++++++||+.+++|..+
T Consensus       160 ~~~a~llGCgV~TG~Gav~nta~v~~G~tvaV~GlGgVGlaaI~gA~~agA~~IiAvD~~~~Kl~~A~~fGAT~~vn~~~  239 (366)
T COG1062         160 LEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGLGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKKFGATHFVNPKE  239 (366)
T ss_pred             ccceEEEeeeeccChHHhhhcccCCCCCeEEEEeccHhHHHHHHHHHHcCCceEEEEeCCHHHHHHHHhcCCceeecchh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999887


Q ss_pred             CChhHHHHHHHHcCCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhhccccEEEEEeccCCCCC
Q 018529          224 HDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPR  303 (354)
Q Consensus       224 ~~~~~~~~i~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~  303 (354)
                      .. +..+.+.+++++|+|.+|||+|+.+.+++++.+..+ ||+.+++|........++++..+...++++|++++.-..+
T Consensus       240 ~~-~vv~~i~~~T~gG~d~~~e~~G~~~~~~~al~~~~~-~G~~v~iGv~~~~~~i~~~~~~lv~gr~~~Gs~~G~~~p~  317 (366)
T COG1062         240 VD-DVVEAIVELTDGGADYAFECVGNVEVMRQALEATHR-GGTSVIIGVAGAGQEISTRPFQLVTGRVWKGSAFGGARPR  317 (366)
T ss_pred             hh-hHHHHHHHhcCCCCCEEEEccCCHHHHHHHHHHHhc-CCeEEEEecCCCCceeecChHHeeccceEEEEeecCCccc
Confidence            64 489999999999999999999999999999999999 6999999998888888888888887799999999999999


Q ss_pred             CCHHHHHHHHHccCCCCCCceeeeeccccHHHHHHHHhcCCceeEEEec
Q 018529          304 TDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISM  352 (354)
Q Consensus       304 ~~~~~~~~~~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~~k~vi~~  352 (354)
                      .++.+++++..+|++.+.++++++++|+|++|||+.+.+++..|.||.|
T Consensus       318 ~diP~lv~~y~~Gkl~~d~lvt~~~~Le~INeaf~~m~~G~~IR~Vi~~  366 (366)
T COG1062         318 SDIPRLVDLYMAGKLPLDRLVTHTIPLEDINEAFDLMHEGKSIRSVIRF  366 (366)
T ss_pred             cchhHHHHHHHcCCCchhHHhhccccHHHHHHHHHHHhCCceeeEEecC
Confidence            9999999999999999999999999999999999999999999988865

>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=3e-62  Score=408.94  Aligned_cols=347  Identities=57%  Similarity=1.036  Sum_probs=326.9

Q ss_pred             ccchhcceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCC
Q 018529            6 GLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSD   85 (354)
Q Consensus         6 ~~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~   85 (354)
                      ..+.++||.+.+++++||.++++.+++|+.+||+||+.++++|++|.+.+.|..+...+|.++|||.+|+|+.+|..|++
T Consensus         3 gkvI~CKAAV~w~a~~PL~IEei~V~pPka~EVRIKI~~t~vCHTD~~~~~g~~~~~~fP~IlGHEaaGIVESvGegV~~   82 (375)
T KOG0022|consen    3 GKVITCKAAVAWEAGKPLVIEEIEVAPPKAHEVRIKILATGVCHTDAYVWSGKDPEGLFPVILGHEAAGIVESVGEGVTT   82 (375)
T ss_pred             CCceEEeEeeeccCCCCeeEEEEEeCCCCCceEEEEEEEEeeccccceeecCCCccccCceEecccceeEEEEecCCccc
Confidence            46789999999999999999999999999999999999999999999999998777889999999999999999999999


Q ss_pred             CCCCCEEEecccCCCCCCcccccCCC--------------------------CCCcccccccccceeeEEeeccceEECC
Q 018529           86 LEVGDHVLPVFTGECGDCRHCRFSIN--------------------------GEPVNHFLGTSTFSEYTVVHSGCVAKIN  139 (354)
Q Consensus        86 ~~~Gd~V~~~~~~~~~~c~~c~~~~~--------------------------~~~~~~~~~~g~~a~~~~v~~~~~~~~P  139 (354)
                      +++||+|+..+.-.|+.|.+|+.+-.                          +...|++.+..+|+||.+++...+.+++
T Consensus        83 vk~GD~Viplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~~~gk~iyHfmg~StFsEYTVv~~~~v~kId  162 (375)
T KOG0022|consen   83 VKPGDHVIPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFTCKGKPIYHFMGTSTFSEYTVVDDISVAKID  162 (375)
T ss_pred             cCCCCEEeeccccCCCCcccccCCCCChhhhhcccccccccccCCceeeeeCCCceEEecccccceeEEEeecceeEecC
Confidence            99999999999999999999942211                          2345777777899999999999999999


Q ss_pred             CCCCccchhhcccchhhhhhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEE
Q 018529          140 PLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFV  219 (354)
Q Consensus       140 ~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~  219 (354)
                      +..+++.++.|.|.+.|+|.|..+.+++++|+++.|+|.|++|+++++-|++.|+.++|++|.+++|.+.+++||+.+.+
T Consensus       163 ~~aPl~kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfGLG~VGLav~~Gaka~GAsrIIgvDiN~~Kf~~ak~fGaTe~i  242 (375)
T KOG0022|consen  163 PSAPLEKVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFGLGGVGLAVAMGAKAAGASRIIGVDINPDKFEKAKEFGATEFI  242 (375)
T ss_pred             CCCChhheeEeeccccccchhhhhhcccCCCCEEEEEecchHHHHHHHhHHhcCcccEEEEecCHHHHHHHHhcCcceec
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCChhHHHHHHHHcCCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhhccccEEEEEeccC
Q 018529          220 NTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGN  299 (354)
Q Consensus       220 ~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~  299 (354)
                      |..+..+...+.+.+.|.+|+|+-|||+|+.+.+++++.+...+||.-+.+|....+....+.++.+.+.+++.|+.++.
T Consensus       243 Np~d~~~~i~evi~EmTdgGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~~~~i~~~p~~l~~GR~~~Gs~FGG  322 (375)
T KOG0022|consen  243 NPKDLKKPIQEVIIEMTDGGVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAAGQEISTRPFQLVTGRTWKGSAFGG  322 (375)
T ss_pred             ChhhccccHHHHHHHHhcCCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCCCcccccchhhhccccEEEEEeccc
Confidence            99855555889999999999999999999999999999999999999999999888888889999899999999999999


Q ss_pred             CCCCCCHHHHHHHHHccCCCCCCceeeeeccccHHHHHHHHhcCCceeEEEec
Q 018529          300 YKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISM  352 (354)
Q Consensus       300 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~~k~vi~~  352 (354)
                      ++.+.++..+++...++++.++++++|++||+++++||+.|.+++..|.||.+
T Consensus       323 ~K~~~~iP~lV~~y~~~~l~ld~~ITh~l~f~~In~AF~ll~~GksiR~vl~~  375 (375)
T KOG0022|consen  323 FKSKSDIPKLVKDYMKKKLNLDEFITHELPFEEINKAFDLLHEGKSIRCVLWM  375 (375)
T ss_pred             ccchhhhhHHHHHHHhCccchhhhhhcccCHHHHHHHHHHHhCCceEEEEEeC
Confidence            99999999999999999999999999999999999999999999999998864

>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1.1e-60  Score=402.64  Aligned_cols=338  Identities=28%  Similarity=0.452  Sum_probs=297.1

Q ss_pred             hhcceeeeccCCCceEEEEeecCCC-CCCeEEEEEeeeecCccchhhhccCCCCC---CCCcccccceeEEEEEeCCCCC
Q 018529            9 LTCKAAVAWEAGKPLIIQDVEVAPP-QAMEVRIKIKYTSLCRTDLYFWESKGQTP---LFPRIFGHEAAGVVESVGEGVS   84 (354)
Q Consensus         9 ~~~~a~~~~~~~~~l~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~~~~~~~---~~p~~~G~e~~G~V~~vG~~~~   84 (354)
                      .+|+|+++.+++. +++.+.|.|++ .|+||+|++.++|||+||++.+.+.....   +.|+++|||.+|+|.++|+.|+
T Consensus         3 ~~~~A~vl~g~~d-i~i~~~p~p~i~~p~eVlv~i~a~GICGSDvHy~~~G~ig~~v~k~PmvlGHEssGiV~evG~~Vk   81 (354)
T KOG0024|consen    3 ADNLALVLRGKGD-IRIEQRPIPTITDPDEVLVAIKAVGICGSDVHYYTHGRIGDFVVKKPMVLGHESSGIVEEVGDEVK   81 (354)
T ss_pred             cccceeEEEccCc-eeEeeCCCCCCCCCCEEEEEeeeEEecCccchhhccCCcCccccccccccccccccchhhhccccc
Confidence            3789999999998 99999999987 99999999999999999999998755432   4799999999999999999999


Q ss_pred             CCCCCCEEEecccCCCCCCcccccCC-CCCCccccccc----ccceeeEEeeccceEECCCCCCccchhhcccchhhhhh
Q 018529           85 DLEVGDHVLPVFTGECGDCRHCRFSI-NGEPVNHFLGT----STFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLG  159 (354)
Q Consensus        85 ~~~~Gd~V~~~~~~~~~~c~~c~~~~-~~~~~~~~~~~----g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~  159 (354)
                      ++++||||+..|..+|+.|.+|+.+. +-|....+...    |++++|++.+++.++++|+++|++++|.+. +++.+||
T Consensus        82 ~LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f~atpp~~G~la~y~~~~~dfc~KLPd~vs~eeGAl~e-PLsV~~H  160 (354)
T KOG0024|consen   82 HLKVGDRVAIEPGLPCRDCDFCKEGRYNLCPHMVFCATPPVDGTLAEYYVHPADFCYKLPDNVSFEEGALIE-PLSVGVH  160 (354)
T ss_pred             ccccCCeEEecCCCccccchhhhCcccccCCccccccCCCcCCceEEEEEechHheeeCCCCCchhhccccc-chhhhhh
Confidence            99999999999999999999998775 44555555443    899999999999999999999999999887 7999999


Q ss_pred             hhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCC--hhHHHHHHHHcC
Q 018529          160 ATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHD--RPIQEVIAEMTN  237 (354)
Q Consensus       160 ~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~--~~~~~~i~~~~~  237 (354)
                      | .+++++++|++|||+|+|++|++++..||++|+.+|+.++..++|++++++||++.+.+....+  .++.+.++....
T Consensus       161 A-cr~~~vk~Gs~vLV~GAGPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~~Ga~~~~~~~~~~~~~~~~~~v~~~~g  239 (354)
T KOG0024|consen  161 A-CRRAGVKKGSKVLVLGAGPIGLLTGLVAKAMGASDVVITDLVANRLELAKKFGATVTDPSSHKSSPQELAELVEKALG  239 (354)
T ss_pred             h-hhhcCcccCCeEEEECCcHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHHhCCeEEeeccccccHHHHHHHHHhhcc
Confidence            9 6889999999999999999999999999999999999999999999999999999887776654  445566666655


Q ss_pred             C-CccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhhccccEEEEEeccCCCCCCCHHHHHHHHHcc
Q 018529          238 G-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNK  316 (354)
Q Consensus       238 ~-~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~  316 (354)
                      . .+|++|||+|....++.++.+++.+ |++++.+......+++.... ..++++++|++-+.   ..++..+++++.+|
T Consensus       240 ~~~~d~~~dCsG~~~~~~aai~a~r~g-Gt~vlvg~g~~~~~fpi~~v-~~kE~~~~g~fry~---~~~y~~ai~li~sG  314 (354)
T KOG0024|consen  240 KKQPDVTFDCSGAEVTIRAAIKATRSG-GTVVLVGMGAEEIQFPIIDV-ALKEVDLRGSFRYC---NGDYPTAIELVSSG  314 (354)
T ss_pred             ccCCCeEEEccCchHHHHHHHHHhccC-CEEEEeccCCCccccChhhh-hhheeeeeeeeeec---cccHHHHHHHHHcC
Confidence            4 6999999999989999999999997 99999998775555544333 45999999987322   24899999999999


Q ss_pred             CCCCCCceeeeeccccHHHHHHHHhcCCc--eeEEEecCC
Q 018529          317 QLELEKFITHRIPFSEINKAFEYMVKGEG--LRCIISMED  354 (354)
Q Consensus       317 ~~~~~~~v~~~~~l~~~~~a~~~~~~~~~--~k~vi~~~d  354 (354)
                      ++.++++++++|+++++.+||+.+.++..  .|++|..++
T Consensus       315 ki~~k~lIT~r~~~~~~~eAf~~~~~~~~~~iKv~i~~~~  354 (354)
T KOG0024|consen  315 KIDVKPLITHRYKFDDADEAFETLQHGEEGVIKVIITGPE  354 (354)
T ss_pred             CcCchhheecccccchHHHHHHHHHhCcCCceEEEEeCCC
Confidence            99999999999999999999999988874  599998754

>PLN02740 Alcohol dehydrogenase-like

Probab=100.00  E-value=1.1e-56  Score=413.66  Aligned_cols=348  Identities=52%  Similarity=0.988  Sum_probs=299.2

Q ss_pred             cccchhcceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCC-CCCCcccccceeEEEEEeCCCC
Q 018529            5 AGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGV   83 (354)
Q Consensus         5 ~~~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~~   83 (354)
                      .+.|++|||+++.++++++++++++.|+|+++||+|||.++|+|++|++.+.|..+. ..+|.++|||++|+|+++|+++
T Consensus         5 ~~~~~~mka~~~~~~~~~~~~~e~~~P~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v   84 (381)
T PLN02740          5 QGKVITCKAAVAWGPGEPLVMEEIRVDPPQKMEVRIKILYTSICHTDLSAWKGENEAQRAYPRILGHEAAGIVESVGEGV   84 (381)
T ss_pred             cccceeeEEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEecChhhHHHhCCCCcccCCCCccccccceEEEEEeCCCC
Confidence            347889999999999877899999999999999999999999999999998876432 3568999999999999999999


Q ss_pred             CCCCCCCEEEecccCCCCCCcccccCCC-CCCccc---------------------------ccccccceeeEEeeccce
Q 018529           84 SDLEVGDHVLPVFTGECGDCRHCRFSIN-GEPVNH---------------------------FLGTSTFSEYTVVHSGCV  135 (354)
Q Consensus        84 ~~~~~Gd~V~~~~~~~~~~c~~c~~~~~-~~~~~~---------------------------~~~~g~~a~~~~v~~~~~  135 (354)
                      ++|++||||++.+..+|+.|.+|+.+.. .|.++.                           ....|+|+||+.+|++.+
T Consensus        85 ~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~  164 (381)
T PLN02740         85 EDLKAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDSACV  164 (381)
T ss_pred             CcCCCCCEEEecCCCCCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCcccccccCccceeEEEEehHHe
Confidence            9999999999999999999999976542 222221                           112589999999999999


Q ss_pred             EECCCCCCccchhhcccchhhhhhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCC
Q 018529          136 AKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV  215 (354)
Q Consensus       136 ~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~  215 (354)
                      +++|+++++++++.+++++.+||+++.+.+++++|++|||+|+|++|++++|+|+.+|+.+|++++++++|+++++++|+
T Consensus       165 ~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~~~Ga  244 (381)
T PLN02740        165 VKIDPNAPLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFGLGAVGLAVAEGARARGASKIIGVDINPEKFEKGKEMGI  244 (381)
T ss_pred             EECCCCCCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHHHcCC
Confidence            99999999999999999999999987778899999999999999999999999999998679999999999999999999


Q ss_pred             ceEEcCCCCChhHHHHHHHHcCCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhhccccEEEEE
Q 018529          216 TDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGT  295 (354)
Q Consensus       216 ~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~  295 (354)
                      +.++++.+.+.++.+.+++++.+++|+|||++|++..+..+++++++++|+++.+|.......+.+....+.+++++.|+
T Consensus       245 ~~~i~~~~~~~~~~~~v~~~~~~g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~  324 (381)
T PLN02740        245 TDFINPKDSDKPVHERIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTPKMLPLHPMELFDGRSITGS  324 (381)
T ss_pred             cEEEecccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCCceecccHHHHhcCCeEEEE
Confidence            99988776433477788888766899999999988899999999988339999999865333344444434578899998


Q ss_pred             eccCCCCCCCHHHHHHHHHccCCCCCCceeeeeccccHHHHHHHHhcCCceeEEEec
Q 018529          296 FFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISM  352 (354)
Q Consensus       296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~~k~vi~~  352 (354)
                      +.+.+....++.++++++.++++++.++++++|+|+|+++|++.+.+++..|++|.+
T Consensus       325 ~~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~e~~~A~~~~~~~~~~k~~~~~  381 (381)
T PLN02740        325 VFGDFKGKSQLPNLAKQCMQGVVNLDGFITHELPFEKINEAFQLLEDGKALRCLLHL  381 (381)
T ss_pred             ecCCCCcHHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHHCCCceeEEEeC
Confidence            876655445789999999999998888899999999999999999988888998863

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1e-56  Score=377.67  Aligned_cols=335  Identities=26%  Similarity=0.425  Sum_probs=289.6

Q ss_pred             cccchhcceeeeccCCC--ceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCC
Q 018529            5 AGLILTCKAAVAWEAGK--PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEG   82 (354)
Q Consensus         5 ~~~~~~~~a~~~~~~~~--~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~   82 (354)
                      ...|.+.+++.+..++.  ++++.+++.|+++++||+|+|+|||||++|++.+.|..+...+|.++|||++|+|+++|++
T Consensus         4 ~~~p~k~~g~~~~~~~G~l~p~~~~~~~~~~g~~dv~vkI~~cGIChsDlH~~~gdwg~s~~PlV~GHEiaG~VvkvGs~   83 (360)
T KOG0023|consen    4 MSIPEKQFGWAARDPSGVLSPEVFSFPVREPGENDVLVKIEYCGVCHSDLHAWKGDWGLSKYPLVPGHEIAGVVVKVGSN   83 (360)
T ss_pred             ccCchhhEEEEEECCCCCCCcceeEcCCCCCCCCcEEEEEEEEeccchhHHHhhccCCcccCCccCCceeeEEEEEECCC
Confidence            45899999999999998  5777999999999999999999999999999999999888899999999999999999999


Q ss_pred             CCCCCCCCEE-EecccCCCCCCcccccCCC-CCC----------cccccccccceeeEEeeccceEECCCCCCccchhhc
Q 018529           83 VSDLEVGDHV-LPVFTGECGDCRHCRFSIN-GEP----------VNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCIL  150 (354)
Q Consensus        83 ~~~~~~Gd~V-~~~~~~~~~~c~~c~~~~~-~~~----------~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l  150 (354)
                      +++|++|||| +.....+|++|.+|..+.- .|+          ..+....|+|++|+++++.+++++|++++++.||.+
T Consensus        84 V~~~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t~~g~~~DGt~~~ggf~~~~~v~~~~a~kIP~~~pl~~aAPl  163 (360)
T KOG0023|consen   84 VTGFKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKMHFTYNGVYHDGTITQGGFQEYAVVDEVFAIKIPENLPLASAAPL  163 (360)
T ss_pred             cccccccCeeeeeEEeccccCccccccCCcccCCceeEeccccccCCCCccCccceeEEEeeeeEEECCCCCChhhccch
Confidence            9999999999 5778889999999975542 222          122333367999999999999999999999999999


Q ss_pred             ccchhhhhhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCCh-hhHHHHHhcCCceEEcCCCCChhHH
Q 018529          151 SCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS-KRFEEAKKFGVTDFVNTSEHDRPIQ  229 (354)
Q Consensus       151 ~~~~~~a~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~  229 (354)
                      .|+..|.|.+| ...++.||+++-|.|+|++|.+++|+||++|. +|++++++. +|.+.++.||++..++..++ +++.
T Consensus       164 LCaGITvYspL-k~~g~~pG~~vgI~GlGGLGh~aVq~AKAMG~-rV~vis~~~~kkeea~~~LGAd~fv~~~~d-~d~~  240 (360)
T KOG0023|consen  164 LCAGITVYSPL-KRSGLGPGKWVGIVGLGGLGHMAVQYAKAMGM-RVTVISTSSKKKEEAIKSLGADVFVDSTED-PDIM  240 (360)
T ss_pred             hhcceEEeehh-HHcCCCCCcEEEEecCcccchHHHHHHHHhCc-EEEEEeCCchhHHHHHHhcCcceeEEecCC-HHHH
Confidence            99999999995 66889999999999997799999999999999 999999887 67777888999988887643 3488


Q ss_pred             HHHHHHcCCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhh-hccccEEEEEeccCCCCCCCHHH
Q 018529          230 EVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNYKPRTDLPS  308 (354)
Q Consensus       230 ~~i~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~~~~~~~~  308 (354)
                      +.+...+++++|-|.+.  ....++.++..++.+ |++|++|.+..  ...+.... .++.+.+.|+..++.   .+.++
T Consensus       241 ~~~~~~~dg~~~~v~~~--a~~~~~~~~~~lk~~-Gt~V~vg~p~~--~~~~~~~~lil~~~~I~GS~vG~~---ket~E  312 (360)
T KOG0023|consen  241 KAIMKTTDGGIDTVSNL--AEHALEPLLGLLKVN-GTLVLVGLPEK--PLKLDTFPLILGRKSIKGSIVGSR---KETQE  312 (360)
T ss_pred             HHHHHhhcCcceeeeec--cccchHHHHHHhhcC-CEEEEEeCcCC--cccccchhhhcccEEEEeeccccH---HHHHH
Confidence            88888887777777766  446789999999998 99999999875  33444443 448899999988765   68999


Q ss_pred             HHHHHHccCCCCCCceeeeeccccHHHHHHHHhcCCc-eeEEEecC
Q 018529          309 VVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISME  353 (354)
Q Consensus       309 ~~~~~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~~~  353 (354)
                      +++++.++.+.+.   .+..+++++++||+.+.+++- .|.||+++
T Consensus       313 ~Ldf~a~~~ik~~---IE~v~~~~v~~a~erm~kgdV~yRfVvD~s  355 (360)
T KOG0023|consen  313 ALDFVARGLIKSP---IELVKLSEVNEAYERMEKGDVRYRFVVDVS  355 (360)
T ss_pred             HHHHHHcCCCcCc---eEEEehhHHHHHHHHHHhcCeeEEEEEEcc
Confidence            9999999977765   467899999999999999986 69999874

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=100.00  E-value=1.5e-55  Score=404.35  Aligned_cols=342  Identities=49%  Similarity=0.899  Sum_probs=290.8

Q ss_pred             cceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 018529           11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD   90 (354)
Q Consensus        11 ~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd   90 (354)
                      |||+++..++++++++++|.|+|+++||+|||.++|+|++|++.+.|..+...+|.++|||++|+|+++|+++++|++||
T Consensus         2 ~~a~~~~~~~~~l~~~~~~~P~~~~~eVlI~v~a~gi~~sD~~~~~g~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd   81 (368)
T TIGR02818         2 SRAAVAWAAGQPLKIEEVDVEMPQKGEVLVRIVATGVCHTDAFTLSGADPEGVFPVILGHEGAGIVEAVGEGVTSVKVGD   81 (368)
T ss_pred             ceEEEEecCCCCeEEEEecCCCCCCCeEEEEEEEecccHHHHHHhcCCCCCCCCCeeeccccEEEEEEECCCCccCCCCC
Confidence            78999999888899999999999999999999999999999999888665456789999999999999999999999999


Q ss_pred             EEEecccCCCCCCcccccCCCC-CCccc------------------------ccccccceeeEEeeccceEECCCCCCcc
Q 018529           91 HVLPVFTGECGDCRHCRFSING-EPVNH------------------------FLGTSTFSEYTVVHSGCVAKINPLAPLD  145 (354)
Q Consensus        91 ~V~~~~~~~~~~c~~c~~~~~~-~~~~~------------------------~~~~g~~a~~~~v~~~~~~~~P~~~~~~  145 (354)
                      ||++.+..+|++|.+|+.+... |..+.                        ..+.|+|+||+.+|++.++++|++++++
T Consensus        82 rV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~lP~~l~~~  161 (368)
T TIGR02818        82 HVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKINPAAPLE  161 (368)
T ss_pred             EEEEcCCCCCCCChhhhCCCcccccCcccccccccccCCccccccCCCcccccccCccceeeEEechhheEECCCCCCHH
Confidence            9999999999999999866432 22110                        1124799999999999999999999999


Q ss_pred             chhhcccchhhhhhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCC
Q 018529          146 KVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHD  225 (354)
Q Consensus       146 ~aa~l~~~~~~a~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~  225 (354)
                      +++.+++++.+||+++.+.+++++|++|||+|+|++|++++|+|+.+|+.+|++++++++++++++++|++.++++.+.+
T Consensus       162 ~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~~~Ga~~~i~~~~~~  241 (368)
T TIGR02818       162 EVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGLGGIGLSVIQGARMAKASRIIAIDINPAKFELAKKLGATDCVNPNDYD  241 (368)
T ss_pred             HhhhhcchhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCeEEcccccc
Confidence            99999999999999987788999999999999999999999999999987799999999999999999999999877544


Q ss_pred             hhHHHHHHHHcCCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhhccccEEEEEeccCCCCCCC
Q 018529          226 RPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTD  305 (354)
Q Consensus       226 ~~~~~~i~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~  305 (354)
                      .++.+.+++++++++|++||++|++..+..+++++++++|+++.+|..............+.++..+.|+..+....+++
T Consensus       242 ~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  321 (368)
T TIGR02818       242 KPIQEVIVEITDGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQEISTRPFQLVTGRVWRGSAFGGVKGRTE  321 (368)
T ss_pred             hhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCCCcccccHHHHhccceEEEeeccCCCcHHH
Confidence            44677788887778999999999878899999999873399999997542222333333333445577776544333457


Q ss_pred             HHHHHHHHHccCCCCCCceeeeeccccHHHHHHHHhcCCceeEEEec
Q 018529          306 LPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISM  352 (354)
Q Consensus       306 ~~~~~~~~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~~k~vi~~  352 (354)
                      +.++++++.++++++.++++++|+|+|+++||+.+.+++..|++|.+
T Consensus       322 ~~~~~~~~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~~k~~v~~  368 (368)
T TIGR02818       322 LPGIVEQYMKGEIALDDFVTHTMPLEDINEAFDLMHEGKSIRTVIHY  368 (368)
T ss_pred             HHHHHHHHHCCCCCchhheeEEecHHHHHHHHHHHhCCCceeEEeeC
Confidence            89999999999998888899999999999999999888778999875

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=100.00  E-value=4.1e-55  Score=400.46  Aligned_cols=338  Identities=38%  Similarity=0.633  Sum_probs=292.4

Q ss_pred             hcceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 018529           10 TCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG   89 (354)
Q Consensus        10 ~~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~G   89 (354)
                      ||||+++.+++++++++++|.|+|+++||+|||.++++|++|++.+.|..+ ..+|.++|||++|+|+++|+++++|++|
T Consensus         1 ~mka~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~g~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~~G   79 (358)
T TIGR03451         1 TVRGVIARSKGAPVELETIVVPDPGPGEVIVDIQACGVCHTDLHYREGGIN-DEFPFLLGHEAAGVVEAVGEGVTDVAPG   79 (358)
T ss_pred             CcEEEEEccCCCCCEEEEEECCCCCCCeEEEEEEEEeecHHHHHHhcCCcc-ccCCcccccceEEEEEEeCCCCcccCCC
Confidence            699999999998899999999999999999999999999999998877543 3468899999999999999999999999


Q ss_pred             CEEEecccCCCCCCcccccCCCC-CCcc-----------c-----ccccccceeeEEeeccceEECCCCCCccchhhccc
Q 018529           90 DHVLPVFTGECGDCRHCRFSING-EPVN-----------H-----FLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSC  152 (354)
Q Consensus        90 d~V~~~~~~~~~~c~~c~~~~~~-~~~~-----------~-----~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~  152 (354)
                      |+|++.+..+|+.|.+|..+... |...           +     ..+.|+|+||+.+|++.++++|+++++++|+.+++
T Consensus        80 drV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~aa~l~~  159 (358)
T TIGR03451        80 DYVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKMTLTDGTELSPALGIGAFAEKTLVHAGQCTKVDPAADPAAAGLLGC  159 (358)
T ss_pred             CEEEEccCCCCCCChHHhCcCcccCcCccccccccccccCcccccccccccccceEEEehhheEECCCCCChhHhhhhcc
Confidence            99999999999999999765432 2110           0     02358999999999999999999999999999999


Q ss_pred             chhhhhhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHH
Q 018529          153 GVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVI  232 (354)
Q Consensus       153 ~~~~a~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i  232 (354)
                      ++.++|+++.+.+.+++|++|||+|+|++|++++|+|+.+|+.+|++++++++|+++++++|++.++++.+.+  +.+.+
T Consensus       160 ~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~--~~~~i  237 (358)
T TIGR03451       160 GVMAGLGAAVNTGGVKRGDSVAVIGCGGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVNSSGTD--PVEAI  237 (358)
T ss_pred             cchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcCCCcC--HHHHH
Confidence            9999998877788899999999999999999999999999996699999999999999999999999887654  77888


Q ss_pred             HHHcCC-CccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhh-hccccEEEEEeccCCCCCCCHHHHH
Q 018529          233 AEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNYKPRTDLPSVV  310 (354)
Q Consensus       233 ~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~~~~~~~~~~  310 (354)
                      ++.+++ ++|+|||++|++..+..++++++++ |+++.+|.........+.... +.+++++.+++.+.....+++++++
T Consensus       238 ~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  316 (358)
T TIGR03451       238 RALTGGFGADVVIDAVGRPETYKQAFYARDLA-GTVVLVGVPTPDMTLELPLLDVFGRGGALKSSWYGDCLPERDFPMLV  316 (358)
T ss_pred             HHHhCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEECCCCCCceeeccHHHHhhcCCEEEEeecCCCCcHHHHHHHH
Confidence            888877 8999999999878899999999997 999999976433233444332 3488999988754333446789999


Q ss_pred             HHHHccCCCCCCceeeeeccccHHHHHHHHhcCCceeEEEe
Q 018529          311 DMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIIS  351 (354)
Q Consensus       311 ~~~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~~k~vi~  351 (354)
                      +++.+|++++.++++++|||+|+++||+.+.+++..|++|.
T Consensus       317 ~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~k~~~~  357 (358)
T TIGR03451       317 DLYLQGRLPLDAFVTERIGLDDVEEAFDKMHAGDVLRSVVE  357 (358)
T ss_pred             HHHHcCCCCchheEEEEecHHHHHHHHHHHhCCCcceeEEe
Confidence            99999999888889999999999999999998887788775

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=100.00  E-value=4.2e-55  Score=402.17  Aligned_cols=342  Identities=76%  Similarity=1.274  Sum_probs=296.2

Q ss_pred             hhcceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCCC
Q 018529            9 LTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEV   88 (354)
Q Consensus         9 ~~~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~   88 (354)
                      |+|||+++.+++++++++++++|+|+++||+|||.++++|++|++.+.|..+...+|.++|||++|+|+++|+++++|++
T Consensus         1 ~~~ka~~~~~~~~~~~l~~~~~p~~~~~evlIkv~a~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~   80 (369)
T cd08301           1 ITCKAAVAWEAGKPLVIEEVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKGQTPLFPRILGHEAAGIVESVGEGVTDLKP   80 (369)
T ss_pred             CccEEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEeeCchhHHHhcCCCCCCCCCcccccccceEEEEeCCCCCcccc
Confidence            48999999998888999999999999999999999999999999998886655567899999999999999999999999


Q ss_pred             CCEEEecccCCCCCCcccccCCCC-CCccc-------------------------ccccccceeeEEeeccceEECCCCC
Q 018529           89 GDHVLPVFTGECGDCRHCRFSING-EPVNH-------------------------FLGTSTFSEYTVVHSGCVAKINPLA  142 (354)
Q Consensus        89 Gd~V~~~~~~~~~~c~~c~~~~~~-~~~~~-------------------------~~~~g~~a~~~~v~~~~~~~~P~~~  142 (354)
                      ||||++.+..+|++|++|..+... |..+.                         +...|+|+||+.+++..++++|+++
T Consensus        81 GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~~  160 (369)
T cd08301          81 GDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPEA  160 (369)
T ss_pred             CCEEEEccCCCCCCCchhcCCCcccCcCcccccccccccCCCccccccCCcceeeeeccccceeEEEEecccEEECCCCC
Confidence            999999999999999999766432 22211                         1134789999999999999999999


Q ss_pred             CccchhhcccchhhhhhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCC
Q 018529          143 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS  222 (354)
Q Consensus       143 ~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~  222 (354)
                      ++++++.+++++.++|+++.+..++++|++|||+|+|++|++++|+|+.+|+.+|+++++++++.++++++|++.++++.
T Consensus       161 ~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~~~~Ga~~~i~~~  240 (369)
T cd08301         161 PLDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGLGAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKKFGVTEFVNPK  240 (369)
T ss_pred             CHHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEccc
Confidence            99999999999999999887888999999999999999999999999999986799999999999999999999888876


Q ss_pred             CCChhHHHHHHHHcCCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhhccccEEEEEeccCCCC
Q 018529          223 EHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKP  302 (354)
Q Consensus       223 ~~~~~~~~~i~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~  302 (354)
                      +.+..+.+.+++++++++|++||++|+...+..+++++++++|+++.+|.........+....+.+++++.|++.+.+..
T Consensus       241 ~~~~~~~~~v~~~~~~~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~  320 (369)
T cd08301         241 DHDKPVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDAVFSTHPMNLLNGRTLKGTLFGGYKP  320 (369)
T ss_pred             ccchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCCCcccccCHHHHhcCCeEEEEecCCCCh
Confidence            54334777788877668999999999877889999999993299999998653333444444455789999988766655


Q ss_pred             CCCHHHHHHHHHccCCCCCCceeeeeccccHHHHHHHHhcCCceeEEE
Q 018529          303 RTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCII  350 (354)
Q Consensus       303 ~~~~~~~~~~~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~~k~vi  350 (354)
                      +.+++++++++.++++++.+.++++|||+|+++||+.+.+++..|++|
T Consensus       321 ~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~k~~~  368 (369)
T cd08301         321 KTDLPNLVEKYMKKELELEKFITHELPFSEINKAFDLLLKGECLRCIL  368 (369)
T ss_pred             HHHHHHHHHHHHcCCCCcHHheeeeecHHHHHHHHHHHHCCCceeEEe
Confidence            567899999999999888888899999999999999999998888886

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=100.00  E-value=5.6e-55  Score=401.29  Aligned_cols=336  Identities=41%  Similarity=0.715  Sum_probs=289.7

Q ss_pred             cceeeeccCCC--------ceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCC
Q 018529           11 CKAAVAWEAGK--------PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEG   82 (354)
Q Consensus        11 ~~a~~~~~~~~--------~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~   82 (354)
                      |||+++.++|.        .++++++|.|+|+++||+|||.+++||++|++.+.|..+ ..+|.++|||++|+|+++|++
T Consensus         1 mka~~~~~~g~~~~~~~~~~l~~~~~~~P~~~~~evlV~v~~~gi~~~D~~~~~g~~~-~~~p~i~GhE~~G~V~~vG~~   79 (371)
T cd08281           1 MRAAVLRETGAPTPYADSRPLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVINGDRP-RPLPMALGHEAAGVVVEVGEG   79 (371)
T ss_pred             CcceEEEecccccccccCCCceEEEeecCCCCCCeEEEEEEEEeeCccchHhhcCCCC-CCCCccCCccceeEEEEeCCC
Confidence            79999998763        389999999999999999999999999999999887543 346899999999999999999


Q ss_pred             CCCCCCCCEEEecccCCCCCCcccccCCCC-CCccc------------------------ccccccceeeEEeeccceEE
Q 018529           83 VSDLEVGDHVLPVFTGECGDCRHCRFSING-EPVNH------------------------FLGTSTFSEYTVVHSGCVAK  137 (354)
Q Consensus        83 ~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~-~~~~~------------------------~~~~g~~a~~~~v~~~~~~~  137 (354)
                      ++++++||||++.+..+|+.|..|+.+... |....                        ..+.|+|+||+.+|++.+++
T Consensus        80 v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~g~G~~aey~~v~~~~~~~  159 (371)
T cd08281          80 VTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLRLRGGEINHHLGVSAFAEYAVVSRRSVVK  159 (371)
T ss_pred             CCcCCCCCEEEEccCCCCCCCccccCCCcccccCccccccccccccCcccccccCcccccccCcccceeeEEecccceEE
Confidence            999999999999888899999999866432 22110                        11237999999999999999


Q ss_pred             CCCCCCccchhhcccchhhhhhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCce
Q 018529          138 INPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD  217 (354)
Q Consensus       138 ~P~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~  217 (354)
                      +|+++++++|+.+++++++||+++.+.+++++|++|||+|+|++|++++|+|+..|+++|++++++++|+++++++|++.
T Consensus       160 lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G~G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~  239 (371)
T cd08281         160 IDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVGLGGVGLSALLGAVAAGASQVVAVDLNEDKLALARELGATA  239 (371)
T ss_pred             CCCCCChHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHcCCce
Confidence            99999999999999999999999878889999999999999999999999999999967999999999999999999999


Q ss_pred             EEcCCCCChhHHHHHHHHcCCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhh-ccccEEEEEe
Q 018529          218 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTF  296 (354)
Q Consensus       218 v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~  296 (354)
                      ++++.+.+  +.+.+++++.+++|+||||+|.+..+..++++++++ |+++.+|.........+....+ .+++++.|++
T Consensus       240 ~i~~~~~~--~~~~i~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~  316 (371)
T cd08281         240 TVNAGDPN--AVEQVRELTGGGVDYAFEMAGSVPALETAYEITRRG-GTTVTAGLPDPEARLSVPALSLVAEERTLKGSY  316 (371)
T ss_pred             EeCCCchh--HHHHHHHHhCCCCCEEEECCCChHHHHHHHHHHhcC-CEEEEEccCCCCceeeecHHHHhhcCCEEEEEe
Confidence            99887654  778888887768999999999878999999999997 9999999764323334444433 4899999988


Q ss_pred             ccCCCCCCCHHHHHHHHHccCCCCCCceeeeeccccHHHHHHHHhcCCceeEEE
Q 018529          297 FGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCII  350 (354)
Q Consensus       297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~~k~vi  350 (354)
                      .+.+..++++.++++++.++++++.++++++|+|+|+++||+.+.+++..|+||
T Consensus       317 ~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~vi  370 (371)
T cd08281         317 MGSCVPRRDIPRYLALYLSGRLPVDKLLTHRLPLDEINEGFDRLAAGEAVRQVI  370 (371)
T ss_pred             cCCCChHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCceeeee
Confidence            765544567899999999999998888999999999999999999988765554

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=100.00  E-value=9.2e-55  Score=399.44  Aligned_cols=342  Identities=56%  Similarity=0.966  Sum_probs=293.0

Q ss_pred             hcceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 018529           10 TCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG   89 (354)
Q Consensus        10 ~~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~G   89 (354)
                      +|||+++...++++++++.|.|+|+++||+|||.++|+|++|++.+.|..+...+|.++|||++|+|+++|+++++|++|
T Consensus         2 ~~~a~~~~~~~~~~~~~~~~~P~~~~~eVlIrv~a~gi~~~D~~~~~g~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~vG   81 (368)
T cd08300           2 TCKAAVAWEAGKPLSIEEVEVAPPKAGEVRIKILATGVCHTDAYTLSGADPEGLFPVILGHEGAGIVESVGEGVTSVKPG   81 (368)
T ss_pred             cceEEEEecCCCCcEEEEeecCCCCCCEEEEEEEEEEechhhHHHhcCCCccCCCCceeccceeEEEEEeCCCCccCCCC
Confidence            68999999888889999999999999999999999999999999988766555679999999999999999999999999


Q ss_pred             CEEEecccCCCCCCcccccCCCCCCc-c------------------------cccccccceeeEEeeccceEECCCCCCc
Q 018529           90 DHVLPVFTGECGDCRHCRFSINGEPV-N------------------------HFLGTSTFSEYTVVHSGCVAKINPLAPL  144 (354)
Q Consensus        90 d~V~~~~~~~~~~c~~c~~~~~~~~~-~------------------------~~~~~g~~a~~~~v~~~~~~~~P~~~~~  144 (354)
                      |+|++.+..+|++|.+|+.+....+. .                        ...+.|+|+||+.++++.++++|+++++
T Consensus        82 drV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l~~  161 (368)
T cd08300          82 DHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFSCKGKPIYHFMGTSTFSEYTVVAEISVAKINPEAPL  161 (368)
T ss_pred             CEEEEcCCCCCCCChhhcCCCcCcCCCccccccccccCCCccccccCCcccccccccccceeEEEEchhceEeCCCCCCh
Confidence            99999999999999999866533221 1                        0113479999999999999999999999


Q ss_pred             cchhhcccchhhhhhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCC
Q 018529          145 DKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEH  224 (354)
Q Consensus       145 ~~aa~l~~~~~~a~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~  224 (354)
                      ++++.+++++.+||+++.+.+.+++|++|||+|+|++|++++|+|+.+|+.+|++++++++++++++++|+++++++.+.
T Consensus       162 ~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~~~lGa~~~i~~~~~  241 (368)
T cd08300         162 DKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGLGAVGLAVIQGAKAAGASRIIGIDINPDKFELAKKFGATDCVNPKDH  241 (368)
T ss_pred             hhhhhhccchhhhHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCEEEccccc
Confidence            99999999999999998778899999999999999999999999999999779999999999999999999999988765


Q ss_pred             ChhHHHHHHHHcCCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhhccccEEEEEeccCCCCCC
Q 018529          225 DRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRT  304 (354)
Q Consensus       225 ~~~~~~~i~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~  304 (354)
                      ++++.+.+++++++++|+|||++|++..+..+++++++++|+++.+|..............+.+...+.++..+.+..++
T Consensus       242 ~~~~~~~v~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~  321 (368)
T cd08300         242 DKPIQQVLVEMTDGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQEISTRPFQLVTGRVWKGTAFGGWKSRS  321 (368)
T ss_pred             chHHHHHHHHHhCCCCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCCCccccCHHHHhhcCeEEEEEecccCcHH
Confidence            33477888888877999999999987789999999977349999999764222233333333345577777666565567


Q ss_pred             CHHHHHHHHHccCCCCCCceeeeeccccHHHHHHHHhcCCceeEEEe
Q 018529          305 DLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIIS  351 (354)
Q Consensus       305 ~~~~~~~~~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~~k~vi~  351 (354)
                      ++.++++++.++++++.++++++|+|+|+++||+.+.+++..|++|.
T Consensus       322 ~~~~~~~~~~~g~l~~~~~i~~~~~le~~~~A~~~~~~~~~~k~~~~  368 (368)
T cd08300         322 QVPKLVEDYMKGKIKVDEFITHTMPLDEINEAFDLMHAGKSIRTVVK  368 (368)
T ss_pred             HHHHHHHHHHcCCCChhhceeeeEcHHHHHHHHHHHhCCCCceeeeC
Confidence            89999999999999888889999999999999999988887888863

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>PLN02827 Alcohol dehydrogenase-like

Probab=100.00  E-value=4e-54  Score=395.52  Aligned_cols=342  Identities=56%  Similarity=1.013  Sum_probs=291.4

Q ss_pred             hhcceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCCC
Q 018529            9 LTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEV   88 (354)
Q Consensus         9 ~~~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~   88 (354)
                      ..|||+++.++++.++++++|.|+|+++||+|||.++|+|++|++.+.+..   .+|.++|||++|+|+++|+++++|++
T Consensus        11 ~~mka~~~~~~~~~~~~~e~~~P~~~~~eVlVkv~~~gic~sD~~~~~g~~---~~p~i~GhE~~G~V~~vG~~v~~~~~   87 (378)
T PLN02827         11 ITCRAAVAWGAGEALVMEEVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQA---LFPRIFGHEASGIVESIGEGVTEFEK   87 (378)
T ss_pred             ceeEEEEEecCCCCceEEEeecCCCCCCEEEEEEEEEecChhHHHHhcCCC---CCCeeecccceEEEEEcCCCCcccCC
Confidence            479999999888779999999999999999999999999999999886632   45889999999999999999999999


Q ss_pred             CCEEEecccCCCCCCcccccCCCC-CCcccc------------------------cccccceeeEEeeccceEECCCCCC
Q 018529           89 GDHVLPVFTGECGDCRHCRFSING-EPVNHF------------------------LGTSTFSEYTVVHSGCVAKINPLAP  143 (354)
Q Consensus        89 Gd~V~~~~~~~~~~c~~c~~~~~~-~~~~~~------------------------~~~g~~a~~~~v~~~~~~~~P~~~~  143 (354)
                      ||+|++.+..+|++|.+|+.+... |..+..                        ...|+|+||+.+|++.++++|++++
T Consensus        88 GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~G~~aeyv~v~~~~~~~iP~~l~  167 (378)
T PLN02827         88 GDHVLTVFTGECGSCRHCISGKSNMCQVLGLERKGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPLAP  167 (378)
T ss_pred             CCEEEEecCCCCCCChhhhCcCcccccCccccccccccCCCcccccccCcccccccccccceeeEEechhheEECCCCCC
Confidence            999999999999999999866432 221110                        0238999999999999999999999


Q ss_pred             ccchhhcccchhhhhhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCC
Q 018529          144 LDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE  223 (354)
Q Consensus       144 ~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~  223 (354)
                      +++++.+++++.++|+++.+.+++++|++|||+|+|++|++++|+|+.+|+..|+++++++++.++++++|++.++++.+
T Consensus       168 ~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a~~lGa~~~i~~~~  247 (378)
T PLN02827        168 LHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFGLGTVGLSVAQGAKLRGASQIIGVDINPEKAEKAKTFGVTDFINPND  247 (378)
T ss_pred             HHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEcccc
Confidence            99999999899999988777788999999999999999999999999999967889988999999999999999998775


Q ss_pred             CChhHHHHHHHHcCCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhhccccEEEEEeccCCCCC
Q 018529          224 HDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPR  303 (354)
Q Consensus       224 ~~~~~~~~i~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~  303 (354)
                      .+.++.+.+++++++++|+|||++|.+..+..+++.+++++|+++.+|.......+......+.+++++.|++...+...
T Consensus       248 ~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~  327 (378)
T PLN02827        248 LSEPIQQVIKRMTGGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAKPEVSAHYGLFLSGRTLKGSLFGGWKPK  327 (378)
T ss_pred             cchHHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCCCccccccHHHHhcCceEEeeecCCCchh
Confidence            43347778888876689999999998778899999998833999999986533222222223458999999887655445


Q ss_pred             CCHHHHHHHHHccCCCCCCceeeeeccccHHHHHHHHhcCCceeEEEecC
Q 018529          304 TDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISME  353 (354)
Q Consensus       304 ~~~~~~~~~~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~~k~vi~~~  353 (354)
                      .++.++++++.++++++.++++++|+|+|+.+|++.+.+++..|.||.++
T Consensus       328 ~~~~~~~~~~~~g~i~~~~~i~~~~~le~~~~A~~~~~~~~~~k~vi~~~  377 (378)
T PLN02827        328 SDLPSLVDKYMNKEIMIDEFITHNLSFDEINKAFELMREGKCLRCVIHMP  377 (378)
T ss_pred             hhHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHCCCceEEEEEec
Confidence            57899999999999988778999999999999999999888789999875

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=100.00  E-value=3.7e-53  Score=385.31  Aligned_cols=332  Identities=29%  Similarity=0.452  Sum_probs=283.9

Q ss_pred             cceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCC-CCCCcccccceeEEEEEeCCCCCCCCCC
Q 018529           11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLEVG   89 (354)
Q Consensus        11 ~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~~~~~~~G   89 (354)
                      |||+++.+++. +++++++.|+|+++||+||+.++++|++|++.+.+.... ..+|.++|||++|+|+++|++++++++|
T Consensus         1 mka~~~~~~~~-l~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G   79 (339)
T cd08239           1 MRGAVFPGDRT-VELREFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRAPAYQGVIPGHEPAGVVVAVGPGVTHFRVG   79 (339)
T ss_pred             CeEEEEecCCc-eEEEecCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCccCCCCceeccCceEEEEEECCCCccCCCC
Confidence            79999987765 999999999999999999999999999999987765332 3358899999999999999999999999


Q ss_pred             CEEEecccCCCCCCcccccCCCCCCc-----ccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhh
Q 018529           90 DHVLPVFTGECGDCRHCRFSINGEPV-----NHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNV  164 (354)
Q Consensus        90 d~V~~~~~~~~~~c~~c~~~~~~~~~-----~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~  164 (354)
                      |+|++.+..+|++|++|+.+....+.     ++....|+|+||+.+|++.++++|+++++++|+.+++++.|||+++ ..
T Consensus        80 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~g~~~~G~~ae~~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l-~~  158 (339)
T cd08239          80 DRVMVYHYVGCGACRNCRRGWMQLCTSKRAAYGWNRDGGHAEYMLVPEKTLIPLPDDLSFADGALLLCGIGTAYHAL-RR  158 (339)
T ss_pred             CEEEECCCCCCCCChhhhCcCcccCcCcccccccCCCCcceeEEEechHHeEECCCCCCHHHhhhhcchHHHHHHHH-Hh
Confidence            99999999999999999766533221     2333469999999999999999999999999999999999999996 56


Q ss_pred             cCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC-CccEE
Q 018529          165 AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRS  243 (354)
Q Consensus       165 ~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~~dvv  243 (354)
                      ..+++|++|||+|+|++|++++|+|+.+|+++|+++++++++.++++++|++.++++.+.+   .+.+.+++++ ++|+|
T Consensus       159 ~~~~~g~~vlV~G~G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~~ga~~~i~~~~~~---~~~~~~~~~~~~~d~v  235 (339)
T cd08239         159 VGVSGRDTVLVVGAGPVGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVINSGQDD---VQEIRELTSGAGADVA  235 (339)
T ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCCcch---HHHHHHHhCCCCCCEE
Confidence            7889999999999999999999999999995599999999999999999999999886542   4567777766 89999


Q ss_pred             EEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhhccccEEEEEeccCCCCCCCHHHHHHHHHccCCCCCCc
Q 018529          244 VECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKF  323 (354)
Q Consensus       244 ~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  323 (354)
                      ||++|+...+..++++++++ |+++.+|.... .........+.+++++.|++...   .++++++++++.++++.+.+.
T Consensus       236 id~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~~~~~g~i~~~~~  310 (339)
T cd08239         236 IECSGNTAARRLALEAVRPW-GRLVLVGEGGE-LTIEVSNDLIRKQRTLIGSWYFS---VPDMEECAEFLARHKLEVDRL  310 (339)
T ss_pred             EECCCCHHHHHHHHHHhhcC-CEEEEEcCCCC-cccCcHHHHHhCCCEEEEEecCC---HHHHHHHHHHHHcCCCChhHe
Confidence            99999977778999999997 99999997542 22222222345899999987543   257899999999999988888


Q ss_pred             eeeeeccccHHHHHHHHhcCCceeEEEec
Q 018529          324 ITHRIPFSEINKAFEYMVKGEGLRCIISM  352 (354)
Q Consensus       324 v~~~~~l~~~~~a~~~~~~~~~~k~vi~~  352 (354)
                      ++++|+|+|+++||+.+.++..+|+||.+
T Consensus       311 i~~~~~l~~~~~a~~~~~~~~~gKvvi~~  339 (339)
T cd08239         311 VTHRFGLDQAPEAYALFAQGESGKVVFVF  339 (339)
T ss_pred             EEEEecHHHHHHHHHHHHcCCceEEEEeC
Confidence            99999999999999999887778998864

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase

Probab=100.00  E-value=5.8e-53  Score=387.11  Aligned_cols=341  Identities=57%  Similarity=0.992  Sum_probs=291.8

Q ss_pred             hhcceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCCC
Q 018529            9 LTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEV   88 (354)
Q Consensus         9 ~~~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~   88 (354)
                      ++|||+++...+++++++++|.|.++++||+|||.++++|++|++.+.|..+ ..+|.++|||++|+|+++|++++++++
T Consensus         1 ~~~ka~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~gi~~sD~~~~~g~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~~   79 (365)
T cd08277           1 IKCKAAVAWEAGKPLVIEEIEVAPPKANEVRIKMLATSVCHTDILAIEGFKA-TLFPVILGHEGAGIVESVGEGVTNLKP   79 (365)
T ss_pred             CccEEEEEccCCCCcEEEEEECCCCCCCEEEEEEEEEeechhhHHHhcCCCC-CCCCeecccceeEEEEeeCCCCccCCC
Confidence            4689999998888899999999999999999999999999999999877543 456899999999999999999999999


Q ss_pred             CCEEEecccCCCCCCcccccCCCCCC-ccc-----------------------ccccccceeeEEeeccceEECCCCCCc
Q 018529           89 GDHVLPVFTGECGDCRHCRFSINGEP-VNH-----------------------FLGTSTFSEYTVVHSGCVAKINPLAPL  144 (354)
Q Consensus        89 Gd~V~~~~~~~~~~c~~c~~~~~~~~-~~~-----------------------~~~~g~~a~~~~v~~~~~~~~P~~~~~  144 (354)
                      ||+|++.+..+|++|.+|..+....+ ...                       +.+.|+|+||+.++++.++++|+++++
T Consensus        80 GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~ae~~~v~~~~~~~lP~~l~~  159 (365)
T cd08277          80 GDKVIPLFIGQCGECSNCRSGKTNLCQKYRANESGLMPDGTSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDPAAPL  159 (365)
T ss_pred             CCEEEECCCCCCCCCchhcCcCcccCcCccccccccccCCccccccCCcccccccccccceeeEEEchhheEECCCCCCH
Confidence            99999999999999999976543221 110                       113589999999999999999999999


Q ss_pred             cchhhcccchhhhhhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCC
Q 018529          145 DKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEH  224 (354)
Q Consensus       145 ~~aa~l~~~~~~a~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~  224 (354)
                      ++++.+++++.+||+++.+.+.+++|++|||+|+|++|++++|+|+.+|+.+|++++++++++++++++|++++++..+.
T Consensus       160 ~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~~~~ga~~~i~~~~~  239 (365)
T cd08277         160 EHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGLGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKEFGATDFINPKDS  239 (365)
T ss_pred             HHhhHhcchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCcEeccccc
Confidence            99999999999999987778899999999999999999999999999999779999999999999999999999887664


Q ss_pred             ChhHHHHHHHHcCCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhhccccEEEEEeccCCCCCC
Q 018529          225 DRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRT  304 (354)
Q Consensus       225 ~~~~~~~i~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~  304 (354)
                      +..+.+.+++++++++|+|||++|+...+..+++++++.+|+++.+|.... ....+....+..++++.|++.+.+..+.
T Consensus       240 ~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~~~~~~  318 (365)
T cd08277         240 DKPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPG-AELSIRPFQLILGRTWKGSFFGGFKSRS  318 (365)
T ss_pred             cchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCc-cccccCHhHHhhCCEEEeeecCCCChHH
Confidence            434667777777678999999999878889999999773399999997642 2233344344458899998876665456


Q ss_pred             CHHHHHHHHHccCCCCCCceeeeeccccHHHHHHHHhcCCceeEEEe
Q 018529          305 DLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIIS  351 (354)
Q Consensus       305 ~~~~~~~~~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~~k~vi~  351 (354)
                      ++.++++++.++++.+.++++++|+|+|+++||+.+.+++..|++|+
T Consensus       319 ~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~k~~i~  365 (365)
T cd08277         319 DVPKLVSKYMNKKFDLDELITHVLPFEEINKGFDLMKSGECIRTVIT  365 (365)
T ss_pred             HHHHHHHHHHCCCcChhHheeeEEchhhHHHHHHHHHCCCCceEeeC
Confidence            78999999999998888889999999999999999988877788874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=100.00  E-value=1.2e-52  Score=374.82  Aligned_cols=315  Identities=27%  Similarity=0.382  Sum_probs=266.9

Q ss_pred             cceeeeccCCCc--eEEEEeecCCCCCCeEEEEEeeeecCccchhhhccC-CCCCCCCcccccceeEEEEEeCCCCCCCC
Q 018529           11 CKAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESK-GQTPLFPRIFGHEAAGVVESVGEGVSDLE   87 (354)
Q Consensus        11 ~~a~~~~~~~~~--l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~-~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   87 (354)
                      |||+++.+.+.+  +++.++|.|.|++|||||||.++|+|+.|.....|. .+...+|+++|.|++|+|+++|+++++|+
T Consensus         1 mka~~~~~~g~~~~l~~~e~~~P~p~~geVlVrV~a~gvN~~D~~~r~G~~~~~~~~P~i~G~d~aG~V~avG~~V~~~~   80 (326)
T COG0604           1 MKAVVVEEFGGPEVLKVVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLAPPVRPLPFIPGSEAAGVVVAVGSGVTGFK   80 (326)
T ss_pred             CeEEEEeccCCCceeEEEecCCCCCCCCeEEEEEEEeecChHHHHhccCCCCCCCCCCCcccceeEEEEEEeCCCCCCcC
Confidence            789999988876  889999999999999999999999999999999886 33456899999999999999999999999


Q ss_pred             CCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhcCC
Q 018529           88 VGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKP  167 (354)
Q Consensus        88 ~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~~~  167 (354)
                      +||||+... ..|                   ..|+|+||+.+|++.++++|+++|+++||++++++.|||+++....++
T Consensus        81 ~GdrV~~~~-~~~-------------------~~G~~AEy~~v~a~~~~~~P~~ls~~eAAal~~~~~TA~~~l~~~~~l  140 (326)
T COG0604          81 VGDRVAALG-GVG-------------------RDGGYAEYVVVPADWLVPLPDGLSFEEAAALPLAGLTAWLALFDRAGL  140 (326)
T ss_pred             CCCEEEEcc-CCC-------------------CCCcceeEEEecHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            999999763 110                   358999999999999999999999999999999999999999888999


Q ss_pred             CCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC-CccEEEE
Q 018529          168 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVE  245 (354)
Q Consensus       168 ~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~~dvv~d  245 (354)
                      ++|++|||+|+ |++|.+++|+||++|+ .++++.+++++.++++++|++++++|.+.+  +.+++++++++ ++|+|||
T Consensus       141 ~~g~~VLV~gaaGgVG~~aiQlAk~~G~-~~v~~~~s~~k~~~~~~lGAd~vi~y~~~~--~~~~v~~~t~g~gvDvv~D  217 (326)
T COG0604         141 KPGETVLVHGAAGGVGSAAIQLAKALGA-TVVAVVSSSEKLELLKELGADHVINYREED--FVEQVRELTGGKGVDVVLD  217 (326)
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCC-cEEEEecCHHHHHHHHhcCCCEEEcCCccc--HHHHHHHHcCCCCceEEEE
Confidence            99999999986 9999999999999998 677777788888899999999999998887  99999999998 9999999


Q ss_pred             cccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhhc-cccEEEEEeccCC---CCCCCHHHHHHHHHccCCCCC
Q 018529          246 CTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTFFGNY---KPRTDLPSVVDMYMNKQLELE  321 (354)
Q Consensus       246 ~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~  321 (354)
                      ++|+ +.+..++++|+++ |+++.+|...+.....++...+. +.+++.|.+....   ...+.+.++.+++.+|++++.
T Consensus       218 ~vG~-~~~~~~l~~l~~~-G~lv~ig~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~g~l~~~  295 (326)
T COG0604         218 TVGG-DTFAASLAALAPG-GRLVSIGALSGGPPVPLNLLPLLGKRLTLRGVTLGSRDPEALAEALAELFDLLASGKLKPV  295 (326)
T ss_pred             CCCH-HHHHHHHHHhccC-CEEEEEecCCCCCccccCHHHHhhccEEEEEecceecchHHHHHHHHHHHHHHHcCCCcce
Confidence            9999 7888899999998 99999998763222233333333 7777777765433   112356778999999966655


Q ss_pred             CceeeeeccccHHHHHHHHhcC-C-ceeEEEec
Q 018529          322 KFITHRIPFSEINKAFEYMVKG-E-GLRCIISM  352 (354)
Q Consensus       322 ~~v~~~~~l~~~~~a~~~~~~~-~-~~k~vi~~  352 (354)
                        +.++|||+|..++..+.... + .+|+||.+
T Consensus       296 --i~~~~~l~e~~~a~a~~~~~~~~~GKvvl~~  326 (326)
T COG0604         296 --IDRVYPLAEAPAAAAHLLLERRTTGKVVLKV  326 (326)
T ss_pred             --eccEechhhhHHHHHHHHcccCCcceEEEeC
Confidence              77899999966666654433 4 47999864

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=100.00  E-value=5.5e-52  Score=377.62  Aligned_cols=328  Identities=20%  Similarity=0.320  Sum_probs=270.9

Q ss_pred             chhcceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhcc-CCC--CCCCCcccccceeEEEEEeCCCCC
Q 018529            8 ILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWES-KGQ--TPLFPRIFGHEAAGVVESVGEGVS   84 (354)
Q Consensus         8 ~~~~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~-~~~--~~~~p~~~G~e~~G~V~~vG~~~~   84 (354)
                      ...+||.+++++++ +++++.+.| ++++||||||.++|||++|++.+.+ ...  ...+|.++|||++|+|+++  +++
T Consensus         2 ~~~~~~~~~~~~~~-~~~~~~~~p-~~~~evlVkv~a~gic~sD~~~~~~g~~~~~~~~~p~v~GhE~~G~V~~v--~v~   77 (343)
T PRK09880          2 QVKTQSCVVAGKKD-VAVTEQEIE-WNNNGTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVHS--DSS   77 (343)
T ss_pred             cccceEEEEecCCc-eEEEecCCC-CCCCeEEEEEEEEEECccccHhhccCCcccccccCCcccCcccEEEEEEe--cCc
Confidence            34689999998888 999999997 6899999999999999999998753 222  2356899999999999999  678


Q ss_pred             CCCCCCEEEecccCCCCCCcccccCCCC-CCcccc--------cccccceeeEEeeccceEECCCCCCccchhhcccchh
Q 018529           85 DLEVGDHVLPVFTGECGDCRHCRFSING-EPVNHF--------LGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVS  155 (354)
Q Consensus        85 ~~~~Gd~V~~~~~~~~~~c~~c~~~~~~-~~~~~~--------~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~  155 (354)
                      +|++||||+..+..+|++|.+|..+... |.....        ...|+|+||++++++.++++|+++++++++ +..+++
T Consensus        78 ~~~vGdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa-~~~~~~  156 (343)
T PRK09880         78 GLKEGQTVAINPSKPCGHCKYCLSHNENQCTTMRFFGSAMYFPHVDGGFTRYKVVDTAQCIPYPEKADEKVMA-FAEPLA  156 (343)
T ss_pred             cCCCCCEEEECCCCCCcCChhhcCCChhhCCCcceeecccccCCCCCceeeeEEechHHeEECCCCCCHHHHH-hhcHHH
Confidence            9999999999999999999999766432 222111        135999999999999999999999987655 445788


Q ss_pred             hhhhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHH
Q 018529          156 TGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEM  235 (354)
Q Consensus       156 ~a~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~  235 (354)
                      +||+++ ......+|++|+|+|+|++|++++|+|+.+|+++|++++++++|+++++++|++.++++.+.+  +.+.. +.
T Consensus       157 ~a~~al-~~~~~~~g~~VlV~G~G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~--~~~~~-~~  232 (343)
T PRK09880        157 VAIHAA-HQAGDLQGKRVFVSGVGPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKLVNPQNDD--LDHYK-AE  232 (343)
T ss_pred             HHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHcCCcEEecCCccc--HHHHh-cc
Confidence            999986 445667899999999999999999999999997799999999999999999999999887654  43322 22


Q ss_pred             cCCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhh-hccccEEEEEeccCCCCCCCHHHHHHHHH
Q 018529          236 TNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNYKPRTDLPSVVDMYM  314 (354)
Q Consensus       236 ~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~~~  314 (354)
                       .+++|+|||++|++..+..++++++++ |+++.+|......  .+.... +.+++++.|++..    .++++++++++.
T Consensus       233 -~g~~D~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~~--~~~~~~~~~k~~~i~g~~~~----~~~~~~~~~l~~  304 (343)
T PRK09880        233 -KGYFDVSFEVSGHPSSINTCLEVTRAK-GVMVQVGMGGAPP--EFPMMTLIVKEISLKGSFRF----TEEFNTAVSWLA  304 (343)
T ss_pred             -CCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCCCC--ccCHHHHHhCCcEEEEEeec----cccHHHHHHHHH
Confidence             236999999999977899999999997 9999999754322  233332 3588999988642    357999999999


Q ss_pred             ccCCCCCCceeeeeccccHHHHHHHHhcCCc-eeEEEec
Q 018529          315 NKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM  352 (354)
Q Consensus       315 ~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~~  352 (354)
                      ++++++.++++++|+|+|+++|++.+.+++. +|++|++
T Consensus       305 ~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  343 (343)
T PRK09880        305 NGVINPLPLLSAEYPFTDLEEALIFAGDKTQAAKVQLVF  343 (343)
T ss_pred             cCCCCchhheEEEEEHHHHHHHHHHHhcCCCceEEEEeC
Confidence            9999888889999999999999999988765 7998864

>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

Probab=100.00  E-value=5.1e-51  Score=369.25  Aligned_cols=334  Identities=29%  Similarity=0.418  Sum_probs=274.5

Q ss_pred             cceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCc-ccccceeEEEEEeCCCCCCCCCC
Q 018529           11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPR-IFGHEAAGVVESVGEGVSDLEVG   89 (354)
Q Consensus        11 ~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~-~~G~e~~G~V~~vG~~~~~~~~G   89 (354)
                      |++++++.++...++++.+.|.+.++||+|||.++|||+||++.+++..+....|. ++|||++|+|+++| .++.+++|
T Consensus         1 m~a~~~~~~~~~~~~~~~~~p~~~p~~vlVkv~~~gICGSDlh~~~g~~~~~~~~~~i~GHE~~G~V~evG-~~~~~~~G   79 (350)
T COG1063           1 MKAAVVYVGGGDVRLEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPFVPPGDIILGHEFVGEVVEVG-VVRGFKVG   79 (350)
T ss_pred             CceeEEEecCCccccccCCCCCCCCCeEEEEEEEEeEchhhhhhccCCCCCCCCCCcccCccceEEEEEec-cccCCCCC
Confidence            67777777776455777777778999999999999999999999999777666666 99999999999999 77789999


Q ss_pred             CEEEecccCCCCCCcccccCCC-CCCccc---cc-----ccccceeeEEeeccceEE-CCCCCCccchhhcccchhhhhh
Q 018529           90 DHVLPVFTGECGDCRHCRFSIN-GEPVNH---FL-----GTSTFSEYTVVHSGCVAK-INPLAPLDKVCILSCGVSTGLG  159 (354)
Q Consensus        90 d~V~~~~~~~~~~c~~c~~~~~-~~~~~~---~~-----~~g~~a~~~~v~~~~~~~-~P~~~~~~~aa~l~~~~~~a~~  159 (354)
                      |||++.|..+|++|++|+.+.. .|.+..   ..     ..|+|+||+.+|.+.+++ +|+++ ..+++++..+++++|+
T Consensus        80 drVvv~~~~~Cg~C~~C~~G~~~~C~~~~~~g~~~~~~~~~G~~aEyv~vp~~~~~~~~pd~~-~~~~aal~epla~~~~  158 (350)
T COG1063          80 DRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAGLGGGIDGGFAEYVRVPADFNLAKLPDGI-DEEAAALTEPLATAYH  158 (350)
T ss_pred             CEEEECCCcCCCCChhHhCcCcccCCCccccccccccCCCCCceEEEEEeccccCeecCCCCC-ChhhhhhcChhhhhhh
Confidence            9999999999999999987653 333211   11     358999999999755555 58888 6667777779999987


Q ss_pred             hhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh-cCCceEEcCCCCChhHHHHHHHHcCC
Q 018529          160 ATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNG  238 (354)
Q Consensus       160 ~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~-lg~~~v~~~~~~~~~~~~~i~~~~~~  238 (354)
                      +.-.....+++++|+|+|+|++|++++++|+.+|+.+|++++.+++|++++++ .|++.+++..+.  +..+.+.+.+++
T Consensus       159 ~~a~~~~~~~~~~V~V~GaGpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~~~~~--~~~~~~~~~t~g  236 (350)
T COG1063         159 GHAERAAVRPGGTVVVVGAGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNPSED--DAGAEILELTGG  236 (350)
T ss_pred             hhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCeEeecCccc--cHHHHHHHHhCC
Confidence            74445555666699999999999999999999999999999999999999999 666666655444  377788889988


Q ss_pred             -CccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecch-hhhccccEEEEEeccCCCCCCCHHHHHHHHHcc
Q 018529          239 -GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP-INVLNERTLKGTFFGNYKPRTDLPSVVDMYMNK  316 (354)
Q Consensus       239 -~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~-~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~  316 (354)
                       ++|++|||+|.+..++.+++.++++ |+++++|....... .+.. ..+.+++++.|++.  ...+.+++.+++++.+|
T Consensus       237 ~g~D~vie~~G~~~~~~~ai~~~r~g-G~v~~vGv~~~~~~-~~~~~~~~~kel~l~gs~~--~~~~~~~~~~~~ll~~g  312 (350)
T COG1063         237 RGADVVIEAVGSPPALDQALEALRPG-GTVVVVGVYGGEDI-PLPAGLVVSKELTLRGSLR--PSGREDFERALDLLASG  312 (350)
T ss_pred             CCCCEEEECCCCHHHHHHHHHHhcCC-CEEEEEeccCCccC-ccCHHHHHhcccEEEeccC--CCCcccHHHHHHHHHcC
Confidence             9999999999988999999999997 99999999864432 2322 33559999999842  23345799999999999


Q ss_pred             CCCCCCceeeeeccccHHHHHHHHhcCCc--eeEEEec
Q 018529          317 QLELEKFITHRIPFSEINKAFEYMVKGEG--LRCIISM  352 (354)
Q Consensus       317 ~~~~~~~v~~~~~l~~~~~a~~~~~~~~~--~k~vi~~  352 (354)
                      ++.+..+++++++++|+++||+.+.+.+.  .|++|.+
T Consensus       313 ~i~~~~lit~~~~~~~~~~a~~~~~~~~~~~~Kv~i~~  350 (350)
T COG1063         313 KIDPEKLITHRLPLDDAAEAYELFADRKEEAIKVVLKP  350 (350)
T ss_pred             CCChhHceEeeccHHHHHHHHHHHHhcCCCeEEEEecC
Confidence            99999999999999999999999987553  5888763

>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent

Probab=100.00  E-value=5e-51  Score=375.56  Aligned_cols=335  Identities=23%  Similarity=0.315  Sum_probs=268.0

Q ss_pred             hcceeeeccCCCceEEEEeecCCCC-------CCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCC
Q 018529           10 TCKAAVAWEAGKPLIIQDVEVAPPQ-------AMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEG   82 (354)
Q Consensus        10 ~~~a~~~~~~~~~l~~~~~~~p~~~-------~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~   82 (354)
                      -|||+++.++++ ++++++|.|+|+       +|||||||.++|||++|++++.|..+ ..+|.++|||++|+|+++|++
T Consensus         2 ~mka~v~~~~~~-~~~~e~~~P~~~~~~~~~~~~eVlVkv~a~gIcgsD~~~~~g~~~-~~~p~i~GhE~~G~V~~vG~~   79 (393)
T TIGR02819         2 GNRGVVYLGPGK-VEVQDIDYPKLELPDGRKCEHGVILKVVTTNICGSDQHMVRGRTT-APTGLVLGHEITGEVIEKGRD   79 (393)
T ss_pred             CceEEEEecCCc-eeEEeccCCcccCCCccCCCCeEEEEEEEeeecHHHHHHHCCCCC-CCCCccccceeEEEEEEEcCc
Confidence            489999988886 999999999874       68999999999999999999877543 356899999999999999999


Q ss_pred             CCCCCCCCEEEecccCCCCCCcccccCCCCCCcc----------cc----cccccceeeEEeecc--ceEECCCCCCc--
Q 018529           83 VSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVN----------HF----LGTSTFSEYTVVHSG--CVAKINPLAPL--  144 (354)
Q Consensus        83 ~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~----------~~----~~~g~~a~~~~v~~~--~~~~~P~~~~~--  144 (354)
                      +++|++||||++.+..+|++|++|+.+....+..          ++    ...|+|+||+.+|+.  .++++|++++.  
T Consensus        80 V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~~l~~vP~~~~~~~  159 (393)
T TIGR02819        80 VEFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDMGGWVGGQSEYVMVPYADFNLLKFPDRDQALE  159 (393)
T ss_pred             cccccCCCEEEEecccCCCCChHHHCcCcccCcCCCCCCccceecccccCCCCCceEEEEEechhhCceEECCCcccccc
Confidence            9999999999999999999999998775432221          11    024899999999974  79999998754  


Q ss_pred             --cchhhcccchhhhhhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCC
Q 018529          145 --DKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS  222 (354)
Q Consensus       145 --~~aa~l~~~~~~a~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~  222 (354)
                        .+++.+.+++.++|+++ ...++++|++|||.|+|++|++++|+|+.+|++.|++++++++|+++++++|++. +++.
T Consensus       160 ~~~~~a~l~~~~~ta~~a~-~~~~~~~g~~VlV~G~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~~a~~~Ga~~-v~~~  237 (393)
T TIGR02819       160 KIRDLTMLSDIFPTGYHGA-VTAGVGPGSTVYIAGAGPVGLAAAASAQLLGAAVVIVGDLNPARLAQARSFGCET-VDLS  237 (393)
T ss_pred             cccceeeeccHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHcCCeE-EecC
Confidence              34677788999999985 5688999999999989999999999999999966777788899999999999974 4443


Q ss_pred             CCChhHHHHHHHHcCC-CccEEEEcccCh--------------HhHHHHHHHhhCCCceEEEEcCCCCCceee-------
Q 018529          223 EHDRPIQEVIAEMTNG-GVDRSVECTGNI--------------DNMISAFECVHDGWGVAVLVGVPSKDAVFM-------  280 (354)
Q Consensus       223 ~~~~~~~~~i~~~~~~-~~dvv~d~~g~~--------------~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~-------  280 (354)
                      .. .++.+.+.+++.+ ++|++||++|.+              ..++.+++.++++ |+++++|.........       
T Consensus       238 ~~-~~~~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-G~i~~~G~~~~~~~~~~~~~~~~  315 (393)
T TIGR02819       238 KD-ATLPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVG-GAIGIPGLYVTEDPGAVDAAAKT  315 (393)
T ss_pred             Cc-ccHHHHHHHHcCCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCC-CEEEEeeecCCcccccccccccc
Confidence            22 1266778888776 899999999985              3799999999997 9999999863211111       


Q ss_pred             ----cchhh-hccccEEEEEeccCCCCCCCHHHHHHHHHccCCCCCCcee-eeeccccHHHHHHHHhcCCceeEEEecC
Q 018529          281 ----TKPIN-VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFIT-HRIPFSEINKAFEYMVKGEGLRCIISME  353 (354)
Q Consensus       281 ----~~~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~l~~~~~a~~~~~~~~~~k~vi~~~  353 (354)
                          +.... +.+++++.+..   ....+.+.++++++.++++++.++++ ++|+|+|+++||+.+.++..+|++|+++
T Consensus       316 ~~~~i~~~~~~~~~~~i~g~~---~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~~l~~~~~a~~~~~~~~~~Kvvi~~~  391 (393)
T TIGR02819       316 GSLSIRFGLGWAKSHSFHTGQ---TPVMKYNRNLMQAILHDRVQIAKAVNVTVISLDDAPEGYAEFDAGAAKKFVIDPH  391 (393)
T ss_pred             cccccchHHhhccCceEEecc---CChhhhHHHHHHHHHcCCCCHHHceecceecHHHHHHHHHHHhhCCceEEEEeCC
Confidence                11111 22555666532   11112347899999999998877777 7899999999999998887789999763

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.

>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]

Probab=100.00  E-value=1.7e-51  Score=334.11  Aligned_cols=317  Identities=26%  Similarity=0.295  Sum_probs=277.4

Q ss_pred             ccchhcceeeeccCCCc--eEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCC
Q 018529            6 GLILTCKAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGV   83 (354)
Q Consensus         6 ~~~~~~~a~~~~~~~~~--l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~   83 (354)
                      ..|+..|.+++++.|.+  +++++.|.|+|+|+|++||-.|||+|..|+.+..|.+...+.|++||.|.+|+|+.+|+++
T Consensus         4 ~~p~~~k~i~v~e~Ggydvlk~ed~pv~~papgel~iknka~GlNfid~y~RkGlY~~~plPytpGmEaaGvVvAvG~gv   83 (336)
T KOG1197|consen    4 ASPPLLKCIVVTEFGGYDVLKLEDRPVPPPAPGELTIKNKACGLNFIDLYFRKGLYDPAPLPYTPGMEAAGVVVAVGEGV   83 (336)
T ss_pred             CCCchheEEEEeccCCcceEEEeeecCCCCCCCceEEeehhcCccHHHHHHhccccCCCCCCcCCCcccceEEEEecCCc
Confidence            36889999999999887  8999999999999999999999999999999999988778889999999999999999999


Q ss_pred             CCCCCCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhh
Q 018529           84 SDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLN  163 (354)
Q Consensus        84 ~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~  163 (354)
                      +++++||||+..                       ...|.|+|+..+|...++++|+.+++.+||++.+.++|||.-+++
T Consensus        84 tdrkvGDrVayl-----------------------~~~g~yaee~~vP~~kv~~vpe~i~~k~aaa~llq~lTAy~ll~e  140 (336)
T KOG1197|consen   84 TDRKVGDRVAYL-----------------------NPFGAYAEEVTVPSVKVFKVPEAITLKEAAALLLQGLTAYMLLFE  140 (336)
T ss_pred             cccccccEEEEe-----------------------ccchhhheeccccceeeccCCcccCHHHHHHHHHHHHHHHHHHHH
Confidence            999999999855                       245899999999999999999999999999999999999999999


Q ss_pred             hcCCCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC-Ccc
Q 018529          164 VAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVD  241 (354)
Q Consensus       164 ~~~~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~~d  241 (354)
                      ..++++|++||++.+ |++|+++.|+++..|+ .+|++.++.+|++.+++.|+++.|+++.+|  +.+++++++++ |+|
T Consensus       141 ~y~vkpGhtVlvhaAAGGVGlll~Ql~ra~~a-~tI~~asTaeK~~~akenG~~h~I~y~~eD--~v~~V~kiTngKGVd  217 (336)
T KOG1197|consen  141 AYNVKPGHTVLVHAAAGGVGLLLCQLLRAVGA-HTIATASTAEKHEIAKENGAEHPIDYSTED--YVDEVKKITNGKGVD  217 (336)
T ss_pred             hcCCCCCCEEEEEeccccHHHHHHHHHHhcCc-EEEEEeccHHHHHHHHhcCCcceeeccchh--HHHHHHhccCCCCce
Confidence            999999999999965 9999999999999999 899999999999999999999999999887  99999999988 999


Q ss_pred             EEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhhc-cccEEEE-EeccCCCCCCC----HHHHHHHHHc
Q 018529          242 RSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKG-TFFGNYKPRTD----LPSVVDMYMN  315 (354)
Q Consensus       242 vv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g-~~~~~~~~~~~----~~~~~~~~~~  315 (354)
                      +++|.+|. +.+...+.+|++. |.+|.+|..++.. .+++...+. +.+++.. +.++....+..    ..+++.++.+
T Consensus       218 ~vyDsvG~-dt~~~sl~~Lk~~-G~mVSfG~asgl~-~p~~l~~ls~k~l~lvrpsl~gYi~g~~el~~~v~rl~alvns  294 (336)
T KOG1197|consen  218 AVYDSVGK-DTFAKSLAALKPM-GKMVSFGNASGLI-DPIPLNQLSPKALQLVRPSLLGYIDGEVELVSYVARLFALVNS  294 (336)
T ss_pred             eeeccccc-hhhHHHHHHhccC-ceEEEeccccCCC-CCeehhhcChhhhhhccHhhhcccCCHHHHHHHHHHHHHHhhc
Confidence            99999999 8999999999997 9999999876422 222222222 5565433 33333333323    3567788888


Q ss_pred             cCCCCCCceeeeeccccHHHHHHHHhcCCc-eeEEEecC
Q 018529          316 KQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISME  353 (354)
Q Consensus       316 ~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~~~  353 (354)
                      +.+++.  +.++|||+++.+|+.++++... +|+++...
T Consensus       295 g~lk~~--I~~~ypls~vadA~~diesrktvGkvlLlp~  331 (336)
T KOG1197|consen  295 GHLKIH--IDHVYPLSKVADAHADIESRKTVGKVLLLPG  331 (336)
T ss_pred             Ccccee--eeeecchHHHHHHHHHHHhhhccceEEEeCC
Confidence            977666  8999999999999999998775 78888754

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=100.00  E-value=1.5e-50  Score=369.72  Aligned_cols=332  Identities=21%  Similarity=0.325  Sum_probs=272.5

Q ss_pred             cccchhcceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCC
Q 018529            5 AGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVS   84 (354)
Q Consensus         5 ~~~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   84 (354)
                      +.-||++.++.+++.+..+++.+++.|+|+++||+|||.++|+|++|++.+.|..+...+|.++|||++|+|+++|++++
T Consensus         7 ~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~p~i~GhE~~G~V~~vG~~v~   86 (360)
T PLN02586          7 EEHPQKAFGWAARDPSGVLSPFHFSRRENGDEDVTVKILYCGVCHSDLHTIKNEWGFTRYPIVPGHEIVGIVTKLGKNVK   86 (360)
T ss_pred             hhchhheeEEEecCCCCCceEEeecCCCCCCCeEEEEEEEecCChhhHhhhcCCcCCCCCCccCCcceeEEEEEECCCCC
Confidence            45789999999988877799999999999999999999999999999999877554445789999999999999999999


Q ss_pred             CCCCCCEEEeccc-CCCCCCcccccCCCC-CCccc----------ccccccceeeEEeeccceEECCCCCCccchhhccc
Q 018529           85 DLEVGDHVLPVFT-GECGDCRHCRFSING-EPVNH----------FLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSC  152 (354)
Q Consensus        85 ~~~~Gd~V~~~~~-~~~~~c~~c~~~~~~-~~~~~----------~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~  152 (354)
                      +|++||+|++.+. .+|+.|.+|+.+... |....          ....|+|+||+.+|++.++++|+++++++|+.+++
T Consensus        87 ~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~  166 (360)
T PLN02586         87 KFKEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTKNYGGYSDMIVVDQHFVLRFPDNLPLDAGAPLLC  166 (360)
T ss_pred             ccCCCCEEEEccccCcCCCCccccCCCcccCCCccccccccccCCCcCCCccceEEEEchHHeeeCCCCCCHHHhhhhhc
Confidence            9999999986544 579999999877543 22221          11258999999999999999999999999999999


Q ss_pred             chhhhhhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhh-HHHHHhcCCceEEcCCCCChhHHHH
Q 018529          153 GVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKR-FEEAKKFGVTDFVNTSEHDRPIQEV  231 (354)
Q Consensus       153 ~~~~a~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~-~~~~~~lg~~~v~~~~~~~~~~~~~  231 (354)
                      ++.|+|+++.....+++|++|||.|+|++|++++|+|+.+|+ +|++++.++++ .+.++++|++.++++.+.     +.
T Consensus       167 ~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga-~vi~~~~~~~~~~~~~~~~Ga~~vi~~~~~-----~~  240 (360)
T PLN02586        167 AGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISSSSNKEDEAINRLGADSFLVSTDP-----EK  240 (360)
T ss_pred             chHHHHHHHHHhcccCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCcchhhhHHHhCCCcEEEcCCCH-----HH
Confidence            999999987666667899999999999999999999999999 67777666555 556788999988876542     23


Q ss_pred             HHHHcCCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhh-hccccEEEEEeccCCCCCCCHHHHH
Q 018529          232 IAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNYKPRTDLPSVV  310 (354)
Q Consensus       232 i~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~~~~~~~~~~  310 (354)
                      +++.++ ++|+|||++|.+..+..++++++++ |+++.+|.....  ..+.... +.+++.+.|++.+.   .+++++++
T Consensus       241 ~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~vG~~~~~--~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~  313 (360)
T PLN02586        241 MKAAIG-TMDYIIDTVSAVHALGPLLGLLKVN-GKLITLGLPEKP--LELPIFPLVLGRKLVGGSDIGG---IKETQEML  313 (360)
T ss_pred             HHhhcC-CCCEEEECCCCHHHHHHHHHHhcCC-cEEEEeCCCCCC--CccCHHHHHhCCeEEEEcCcCC---HHHHHHHH
Confidence            444443 6999999999877889999999997 999999875422  2233332 34777787876432   24689999


Q ss_pred             HHHHccCCCCCCceeeeeccccHHHHHHHHhcCCc-eeEEEec
Q 018529          311 DMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM  352 (354)
Q Consensus       311 ~~~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~~  352 (354)
                      +++.+|++++.  + ++|+|+|+++||+.+.+++. +|+||.+
T Consensus       314 ~li~~g~i~~~--~-~~~~l~~~~~A~~~~~~~~~~gkvvi~~  353 (360)
T PLN02586        314 DFCAKHNITAD--I-ELIRMDEINTAMERLAKSDVRYRFVIDV  353 (360)
T ss_pred             HHHHhCCCCCc--E-EEEeHHHHHHHHHHHHcCCCcEEEEEEc
Confidence            99999988753  3 68999999999999998875 6998876

>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=3e-49  Score=360.56  Aligned_cols=335  Identities=23%  Similarity=0.331  Sum_probs=275.9

Q ss_pred             cceeeeccCCCceEEEEeecCCC-CCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 018529           11 CKAAVAWEAGKPLIIQDVEVAPP-QAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG   89 (354)
Q Consensus        11 ~~a~~~~~~~~~l~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~G   89 (354)
                      |||+++.+++. +++.+.|.|.| +++||+|||.++++|++|+........ ..+|.++|||++|+|+++|+++++|++|
T Consensus         1 Mka~~~~~~~~-~~~~~~~~P~~~~~~evlV~v~~~gi~~~D~~~~~~~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~vG   78 (347)
T PRK10309          1 MKSVVNDTDGI-VRVAESPIPEIKHQDDVLVKVASSGLCGSDIPRIFKNGA-HYYPITLGHEFSGYVEAVGSGVDDLHPG   78 (347)
T ss_pred             CceEEEeCCCc-eEEEECCCCCCCCCCEEEEEEEEEEEchhcHHHHhCCCC-CCCCcccccceEEEEEEeCCCCCCCCCC
Confidence            79999998876 99999999997 589999999999999999875432111 2358899999999999999999999999


Q ss_pred             CEEEecccCCCCCCcccccCCCC-CCccc---ccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhc
Q 018529           90 DHVLPVFTGECGDCRHCRFSING-EPVNH---FLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVA  165 (354)
Q Consensus        90 d~V~~~~~~~~~~c~~c~~~~~~-~~~~~---~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~  165 (354)
                      |+|++.+..+|++|++|..+... |....   ....|+|+||+.+|++.++++|+++++++|+.+. ++.++|++ .+..
T Consensus        79 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~~s~~~aa~~~-~~~~~~~~-~~~~  156 (347)
T PRK10309         79 DAVACVPLLPCFTCPECLRGFYSLCAKYDFIGSRRDGGNAEYIVVKRKNLFALPTDMPIEDGAFIE-PITVGLHA-FHLA  156 (347)
T ss_pred             CEEEECCCcCCCCCcchhCcCcccCCCcceeccCCCCccceeEEeehHHeEECcCCCCHHHhhhhh-HHHHHHHH-HHhc
Confidence            99999999999999999866432 22222   2235899999999999999999999999998874 55667887 4667


Q ss_pred             CCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC-Ccc-EE
Q 018529          166 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVD-RS  243 (354)
Q Consensus       166 ~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~~d-vv  243 (354)
                      .+++|++|||+|+|++|++++|+|+.+|++.|+++++++++.++++++|+++++++.+.+   .+.+.+++.+ ++| ++
T Consensus       157 ~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~~~---~~~~~~~~~~~~~d~~v  233 (347)
T PRK10309        157 QGCEGKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDINSEKLALAKSLGAMQTFNSREMS---APQIQSVLRELRFDQLI  233 (347)
T ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCceEecCcccC---HHHHHHHhcCCCCCeEE
Confidence            889999999999999999999999999996689999999999999999999998876543   3456666665 888 99


Q ss_pred             EEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecc-h-hhhccccEEEEEeccCCC--CCCCHHHHHHHHHccCCC
Q 018529          244 VECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTK-P-INVLNERTLKGTFFGNYK--PRTDLPSVVDMYMNKQLE  319 (354)
Q Consensus       244 ~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~-~-~~~~~~~~i~g~~~~~~~--~~~~~~~~~~~~~~~~~~  319 (354)
                      |||+|+...+..++++++++ |+++++|........... . ..+.+++++.|++.+...  .+++++++++++.++++.
T Consensus       234 ~d~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~g~i~  312 (347)
T PRK10309        234 LETAGVPQTVELAIEIAGPR-AQLALVGTLHHDLHLTSATFGKILRKELTVIGSWMNYSSPWPGQEWETASRLLTERKLS  312 (347)
T ss_pred             EECCCCHHHHHHHHHHhhcC-CEEEEEccCCCCcccChhhhhHHhhcCcEEEEEeccccCCcchhHHHHHHHHHHcCCCC
Confidence            99999978999999999997 999999976532222211 1 224488999998764321  235789999999999998


Q ss_pred             CCCceeeeeccccHHHHHHHHhcCCc-eeEEEecC
Q 018529          320 LEKFITHRIPFSEINKAFEYMVKGEG-LRCIISME  353 (354)
Q Consensus       320 ~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~~~  353 (354)
                      +.++++++|+|+|+++|++.+.+++. +|+|+.++
T Consensus       313 ~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~  347 (347)
T PRK10309        313 LEPLIAHRGSFESFAQAVRDLAGNPMPGKVLLQIP  347 (347)
T ss_pred             chhheEEEeeHHHHHHHHHHHhcCCcceEEEEeCC
Confidence            88889999999999999999988775 69998763

>cd08230 glucose_DH Glucose dehydrogenase

Probab=100.00  E-value=5.4e-49  Score=359.80  Aligned_cols=327  Identities=26%  Similarity=0.339  Sum_probs=258.1

Q ss_pred             cceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCC---CCCCcccccceeEEEEEeCCCCCCCC
Q 018529           11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT---PLFPRIFGHEAAGVVESVGEGVSDLE   87 (354)
Q Consensus        11 ~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~---~~~p~~~G~e~~G~V~~vG~~~~~~~   87 (354)
                      |||+++...+.++++.++|.|+|+++||||||.|+|+|++|++.+.|..+.   ..+|.++|||++|+|+++|++ ++|+
T Consensus         1 mka~~~~~~~~~l~~~~~p~p~~~~~evlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~i~G~e~~G~V~~vG~~-~~~~   79 (355)
T cd08230           1 MKAIAVKPGKPGVRVVDIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDFLVLGHEALGVVEEVGDG-SGLS   79 (355)
T ss_pred             CceeEecCCCCCCeEEeCCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCCCCCCCCCeeeccccceEEEEecCC-CCCC
Confidence            689998765544999999999999999999999999999999999886432   235789999999999999999 9999


Q ss_pred             CCCEEEecccCCCCCCcccccCCCCCCc-ccc------cccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhh
Q 018529           88 VGDHVLPVFTGECGDCRHCRFSINGEPV-NHF------LGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGA  160 (354)
Q Consensus        88 ~Gd~V~~~~~~~~~~c~~c~~~~~~~~~-~~~------~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~  160 (354)
                      +||||++.+..+|++|.+|..+....+. ...      ...|+|+||+.++++.++++|++++  +++.+.+++++++++
T Consensus        80 vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~g~~~~~G~~aey~~~~~~~~~~~P~~~~--~~a~~~~p~~~~~~a  157 (355)
T cd08230          80 PGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYTERGIKGLHGFMREYFVDDPEYLVKVPPSLA--DVGVLLEPLSVVEKA  157 (355)
T ss_pred             CCCEEEeccccCCCcChhhhCcCcccCCCcceeccCcCCCCccceeEEEeccccEEECCCCCC--cceeecchHHHHHHH
Confidence            9999999999999999999765432221 111      1358999999999999999999998  344454566655544


Q ss_pred             hhh------hcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcC---ChhhHHHHHhcCCceEEcCCCCChhHHHH
Q 018529          161 TLN------VAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDR---SSKRFEEAKKFGVTDFVNTSEHDRPIQEV  231 (354)
Q Consensus       161 l~~------~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~---~~~~~~~~~~lg~~~v~~~~~~~~~~~~~  231 (354)
                      +..      ..++++|++|+|+|+|++|++++|+|+.+|+ +|+++++   +++|+++++++|++. +++.+.+  +.+ 
T Consensus       158 ~~~~~~~~~~~~~~~g~~vlI~G~G~vG~~a~q~ak~~G~-~vi~~~~~~~~~~~~~~~~~~Ga~~-v~~~~~~--~~~-  232 (355)
T cd08230         158 IEQAEAVQKRLPTWNPRRALVLGAGPIGLLAALLLRLRGF-EVYVLNRRDPPDPKADIVEELGATY-VNSSKTP--VAE-  232 (355)
T ss_pred             HHHHhhhhhhcccCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCHHHHHHHHHcCCEE-ecCCccc--hhh-
Confidence            321      2236789999999999999999999999999 7998887   688999999999986 4555433  333 


Q ss_pred             HHHHcCCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecc-----hhhhccccEEEEEeccCCCCCCCH
Q 018529          232 IAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTK-----PINVLNERTLKGTFFGNYKPRTDL  306 (354)
Q Consensus       232 i~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~-----~~~~~~~~~i~g~~~~~~~~~~~~  306 (354)
                      .+  ..+++|+|||++|++..+..++++++++ |+++++|.........+.     ...+.+++++.|++..   .++++
T Consensus       233 ~~--~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~---~~~~~  306 (355)
T cd08230         233 VK--LVGEFDLIIEATGVPPLAFEALPALAPN-GVVILFGVPGGGREFEVDGGELNRDLVLGNKALVGSVNA---NKRHF  306 (355)
T ss_pred             hh--hcCCCCEEEECcCCHHHHHHHHHHccCC-cEEEEEecCCCCCccccChhhhhhhHhhcCcEEEEecCC---chhhH
Confidence            21  1248999999999877899999999997 999999987642333333     1223489999998643   23678


Q ss_pred             HHHHHHHHccCC----CCCCceeeeeccccHHHHHHHHhcCCceeEEEec
Q 018529          307 PSVVDMYMNKQL----ELEKFITHRIPFSEINKAFEYMVKGEGLRCIISM  352 (354)
Q Consensus       307 ~~~~~~~~~~~~----~~~~~v~~~~~l~~~~~a~~~~~~~~~~k~vi~~  352 (354)
                      .++++++.++.+    .+.+.++++|+|+|+.+||+.+.++. .|+||++
T Consensus       307 ~~~~~~l~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~-~K~v~~~  355 (355)
T cd08230         307 EQAVEDLAQWKYRWPGVLERLITRRVPLEEFAEALTEKPDGE-IKVVIEW  355 (355)
T ss_pred             HHHHHHHHhcccccccchHHheeeeecHHHHHHHHHhcccCC-eEEEeeC
Confidence            999999988862    35667899999999999999886544 6998864

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=100.00  E-value=1e-48  Score=357.00  Aligned_cols=328  Identities=24%  Similarity=0.396  Sum_probs=274.1

Q ss_pred             eeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCC-CCCCCCcccccceeEEEEEeCCCCCCCCCCCEE
Q 018529           14 AVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKG-QTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHV   92 (354)
Q Consensus        14 ~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~-~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V   92 (354)
                      +++++++++++++++|.|+|+++||+|||.++++|++|++.+.+.. +...+|.++|||++|+|+++|++++.+ +||+|
T Consensus         2 ~~~~~~g~~~~~~~~p~P~~~~~evlVrv~~~gic~sD~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~-~GdrV   80 (349)
T TIGR03201         2 WMMTEPGKPMVKTRVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVRTNHALPLALGHEISGRVIQAGAGAASW-IGKAV   80 (349)
T ss_pred             ceEecCCCCceEEeccCCCCCCCeEEEEEEEEeecccchHHHcCCCCccCCCCeeccccceEEEEEeCCCcCCC-CCCEE
Confidence            4566777778999999999999999999999999999998874433 234568999999999999999999887 99999


Q ss_pred             EecccCCCCCCcccccCCCC-CCccc---ccccccceeeEEeeccceEECCC------CCCccchhhcccchhhhhhhhh
Q 018529           93 LPVFTGECGDCRHCRFSING-EPVNH---FLGTSTFSEYTVVHSGCVAKINP------LAPLDKVCILSCGVSTGLGATL  162 (354)
Q Consensus        93 ~~~~~~~~~~c~~c~~~~~~-~~~~~---~~~~g~~a~~~~v~~~~~~~~P~------~~~~~~aa~l~~~~~~a~~~l~  162 (354)
                      ++.+..+|++|.+|..+... |....   ....|+|+||+.+|++.++++|+      ++++++++.+++++.++|+++ 
T Consensus        81 ~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~G~~ae~~~v~~~~~~~ip~~~~~~~~~~~~~~a~~~~~~~ta~~a~-  159 (349)
T TIGR03201        81 IVPAVIPCGECELCKTGRGTICRAQKMPGNDMQGGFASHIVVPAKGLCVVDEARLAAAGLPLEHVSVVADAVTTPYQAA-  159 (349)
T ss_pred             EECCCCCCCCChhhhCcCcccCCCCCccCcCCCCcccceEEechHHeEECCcccccccCCCHHHhhhhcchHHHHHHHH-
Confidence            99999999999999766432 22221   22358999999999999999999      899999999999999999986 


Q ss_pred             hhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCC-hhHHHHHHHHcCC-Cc
Q 018529          163 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHD-RPIQEVIAEMTNG-GV  240 (354)
Q Consensus       163 ~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~-~~~~~~i~~~~~~-~~  240 (354)
                      ....+++|++|+|+|+|++|++++|+|+.+|+ +|++++++++++++++++|++.++++.+.+ +++.+.+++++++ ++
T Consensus       160 ~~~~~~~g~~VlV~G~G~vG~~a~~~a~~~G~-~vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~t~~~g~  238 (349)
T TIGR03201       160 VQAGLKKGDLVIVIGAGGVGGYMVQTAKAMGA-AVVAIDIDPEKLEMMKGFGADLTLNPKDKSAREVKKLIKAFAKARGL  238 (349)
T ss_pred             HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHhCCceEecCccccHHHHHHHHHhhcccCCC
Confidence            45789999999999999999999999999999 799999999999999999999988876643 3477788888877 88


Q ss_pred             c----EEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhh-ccccEEEEEeccCCCCCCCHHHHHHHHHc
Q 018529          241 D----RSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFFGNYKPRTDLPSVVDMYMN  315 (354)
Q Consensus       241 d----vv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~~~~~~~~~~~~~~~~  315 (354)
                      |    +||||+|+...+..++++++++ |+++++|.......  +....+ .++.++.|++...   .++++++++++.+
T Consensus       239 d~~~d~v~d~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~--~~~~~~~~~~~~~~g~~~~~---~~~~~~~~~~i~~  312 (349)
T TIGR03201       239 RSTGWKIFECSGSKPGQESALSLLSHG-GTLVVVGYTMAKTE--YRLSNLMAFHARALGNWGCP---PDRYPAALDLVLD  312 (349)
T ss_pred             CCCcCEEEECCCChHHHHHHHHHHhcC-CeEEEECcCCCCcc--cCHHHHhhcccEEEEEecCC---HHHHHHHHHHHHc
Confidence            6    8999999988888999999997 99999998653322  222233 3677888876432   3579999999999


Q ss_pred             cCCCCCCceeeeeccccHHHHHHHHhcCCc-eeEEEe
Q 018529          316 KQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIIS  351 (354)
Q Consensus       316 ~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~  351 (354)
                      +++++.++++ +|+|+|+++||+.+.+++. +|++++
T Consensus       313 g~i~~~~~i~-~~~l~~~~~A~~~~~~~~~~~k~~~~  348 (349)
T TIGR03201       313 GKIQLGPFVE-RRPLDQIEHVFAAAHHHKLKRRAILT  348 (349)
T ss_pred             CCCCcccceE-EecHHHHHHHHHHHHcCCccceEEec
Confidence            9998877664 7999999999999988875 587775

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=7.4e-49  Score=359.54  Aligned_cols=324  Identities=22%  Similarity=0.336  Sum_probs=262.2

Q ss_pred             eeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCEE
Q 018529           13 AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHV   92 (354)
Q Consensus        13 a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V   92 (354)
                      ++...+.++++++.+++.|+|+++||+|||.++|+|++|++.+.|......+|.++|||++|+|+++|+++++|++||+|
T Consensus         9 ~~~~~~~~~~l~~~~~~~p~~~~~eVlVkV~a~gic~sD~~~~~G~~~~~~~p~i~GhE~aG~Vv~vG~~v~~~~vGdrV   88 (375)
T PLN02178          9 GWAANDESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGFSRYPIIPGHEIVGIATKVGKNVTKFKEGDRV   88 (375)
T ss_pred             EEEEccCCCCceEEeecCCCCCCCeEEEEEEEEcCchHHHHHhcCCCCCCCCCcccCceeeEEEEEECCCCCccCCCCEE
Confidence            33344444458888999999999999999999999999999988755334568999999999999999999999999999


Q ss_pred             EecccC-CCCCCcccccCCCC-CCccc----------ccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhh
Q 018529           93 LPVFTG-ECGDCRHCRFSING-EPVNH----------FLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGA  160 (354)
Q Consensus        93 ~~~~~~-~~~~c~~c~~~~~~-~~~~~----------~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~  160 (354)
                      ++.+.. .|+.|.+|+.+... |....          ....|+|+||+.+|++.++++|+++++++++.+++++.|+|++
T Consensus        89 ~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~~~ta~~a  168 (375)
T PLN02178         89 GVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGITVYSP  168 (375)
T ss_pred             EEcCccCCCCCChhHhCcchhcCCCccccccccccCCCcCCCccccEEEEchHHeEECCCCCCHHHcchhhccchHHHHH
Confidence            876655 69999999876533 22221          1125899999999999999999999999999999999999998


Q ss_pred             hhhhcC-CCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChh-hHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC
Q 018529          161 TLNVAK-PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK-RFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG  238 (354)
Q Consensus       161 l~~~~~-~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~-~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~  238 (354)
                      +..... .++|++|+|.|+|++|++++|+|+.+|+ +|++++++++ +.++++++|+++++++.+.     +.+++.+. 
T Consensus       169 l~~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga-~Vi~~~~~~~~~~~~a~~lGa~~~i~~~~~-----~~v~~~~~-  241 (375)
T PLN02178        169 MKYYGMTKESGKRLGVNGLGGLGHIAVKIGKAFGL-RVTVISRSSEKEREAIDRLGADSFLVTTDS-----QKMKEAVG-  241 (375)
T ss_pred             HHHhCCCCCCCCEEEEEcccHHHHHHHHHHHHcCC-eEEEEeCChHHhHHHHHhCCCcEEEcCcCH-----HHHHHhhC-
Confidence            644332 3689999999999999999999999999 7888877654 4788899999998876542     24445443 


Q ss_pred             CccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhh-hccccEEEEEeccCCCCCCCHHHHHHHHHccC
Q 018529          239 GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQ  317 (354)
Q Consensus       239 ~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~  317 (354)
                      ++|+|||++|.+..+..++++++++ |+++.+|.....  ..+.... +.+++++.|++.+.   .+++.++++++.+|+
T Consensus       242 ~~D~vid~~G~~~~~~~~~~~l~~~-G~iv~vG~~~~~--~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~l~~~g~  315 (375)
T PLN02178        242 TMDFIIDTVSAEHALLPLFSLLKVS-GKLVALGLPEKP--LDLPIFPLVLGRKMVGGSQIGG---MKETQEMLEFCAKHK  315 (375)
T ss_pred             CCcEEEECCCcHHHHHHHHHhhcCC-CEEEEEccCCCC--CccCHHHHHhCCeEEEEeCccC---HHHHHHHHHHHHhCC
Confidence            6999999999877889999999997 999999975432  2233332 34888999887543   257899999999998


Q ss_pred             CCCCCceeeeeccccHHHHHHHHhcCCc-eeEEEec
Q 018529          318 LELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM  352 (354)
Q Consensus       318 ~~~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~~  352 (354)
                      +++.  + ++|||+|+++||+.+.+++. +|+|+.+
T Consensus       316 i~~~--i-~~~~l~~~~~A~~~~~~~~~~gkvvi~~  348 (375)
T PLN02178        316 IVSD--I-ELIKMSDINSAMDRLAKSDVRYRFVIDV  348 (375)
T ss_pred             Cccc--E-EEEeHHHHHHHHHHHHcCCCceEEEEEe
Confidence            8754  4 67999999999999998876 6988876

>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases

Probab=100.00  E-value=3.3e-48  Score=356.14  Aligned_cols=343  Identities=48%  Similarity=0.840  Sum_probs=287.8

Q ss_pred             chhcceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCC
Q 018529            8 ILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLE   87 (354)
Q Consensus         8 ~~~~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   87 (354)
                      ..+|||.++..++++++++++|.|++.++||+|||.++++|++|++.+.|... ..+|.++|||++|+|+++|++++.++
T Consensus         5 ~~~~~a~~~~~~~~~~~l~~~p~p~~~~~~vlvkv~~~gi~~~D~~~~~g~~~-~~~p~v~G~e~~G~V~~vG~~v~~~~   83 (373)
T cd08299           5 VIKCKAAVLWEPKKPFSIEEIEVAPPKAHEVRIKIVATGICRSDDHVVSGKLV-TPFPVILGHEAAGIVESVGEGVTTVK   83 (373)
T ss_pred             cceeEEEEEecCCCCcEEEEeecCCCCCCEEEEEEEEEEcCcccHHHhcCCCC-CCCCccccccceEEEEEeCCCCccCC
Confidence            34689999999888899999999999999999999999999999999877542 34688999999999999999999999


Q ss_pred             CCCEEEecccCCCCCCcccccCCCC-CCccc------------------------ccccccceeeEEeeccceEECCCCC
Q 018529           88 VGDHVLPVFTGECGDCRHCRFSING-EPVNH------------------------FLGTSTFSEYTVVHSGCVAKINPLA  142 (354)
Q Consensus        88 ~Gd~V~~~~~~~~~~c~~c~~~~~~-~~~~~------------------------~~~~g~~a~~~~v~~~~~~~~P~~~  142 (354)
                      +||+|++.+..+|++|.+|..+... |....                        +...|+|+||+.++++.++++|+++
T Consensus        84 ~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~e~~~v~~~~~~~lP~~l  163 (373)
T cd08299          84 PGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFTCKGKPIHHFLGTSTFSEYTVVDEIAVAKIDAAA  163 (373)
T ss_pred             CCCEEEECCCCCCCCChhhhCCCcccCcCcccccccccccCCccccccCCcccccccCCCcccceEEecccceeeCCCCC
Confidence            9999999999999999999765432 22111                        1135899999999999999999999


Q ss_pred             CccchhhcccchhhhhhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCC
Q 018529          143 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS  222 (354)
Q Consensus       143 ~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~  222 (354)
                      ++++++.+++++.+||+++...+.+++|++|||+|+|++|++++++|+.+|+.+|+++++++++++.++++|++++++..
T Consensus       164 ~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a~~lGa~~~i~~~  243 (373)
T cd08299         164 PLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSAIMGCKAAGASRIIAVDINKDKFAKAKELGATECINPQ  243 (373)
T ss_pred             ChHHhheeccchHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEeccc
Confidence            99999999999999999877888999999999999899999999999999986799999999999999999999998876


Q ss_pred             CCChhHHHHHHHHcCCCccEEEEcccChHhHHHHHHHh-hCCCceEEEEcCCCCCceeecchhhhccccEEEEEeccCCC
Q 018529          223 EHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECV-HDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYK  301 (354)
Q Consensus       223 ~~~~~~~~~i~~~~~~~~dvv~d~~g~~~~~~~~~~~l-~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~  301 (354)
                      +.+.++.+.+.+++.+++|+++|++|++..+..++..+ +++ |+++.+|.........+....+.++.++.+++.+.+.
T Consensus       244 ~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~~~~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  322 (373)
T cd08299         244 DYKKPIQEVLTEMTDGGVDFSFEVIGRLDTMKAALASCHEGY-GVSVIVGVPPSSQNLSINPMLLLTGRTWKGAVFGGWK  322 (373)
T ss_pred             ccchhHHHHHHHHhCCCCeEEEECCCCcHHHHHHHHhhccCC-CEEEEEccCCCCceeecCHHHHhcCCeEEEEEecCCc
Confidence            54434666677776668999999999767777767655 565 9999999764333344444334567889988876655


Q ss_pred             CCCCHHHHHHHHHccCCCCCCceeeeeccccHHHHHHHHhcCCceeEEEec
Q 018529          302 PRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISM  352 (354)
Q Consensus       302 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~~k~vi~~  352 (354)
                      .++++.++++.+.++.+.+.+.+++.|+++++.+|++.+.+++..|+++++
T Consensus       323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~~a~~~~~~~~~~k~~~~~  373 (373)
T cd08299         323 SKDSVPKLVADYMAKKFNLDPLITHTLPFEKINEGFDLLRSGKSIRTVLTF  373 (373)
T ss_pred             cHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCcceEEEeC
Confidence            555677888888888777777788999999999999999888778888864

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=100.00  E-value=8.1e-48  Score=353.11  Aligned_cols=337  Identities=27%  Similarity=0.446  Sum_probs=282.4

Q ss_pred             ceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCC------
Q 018529           12 KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSD------   85 (354)
Q Consensus        12 ~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~------   85 (354)
                      ||+++.++++.+++++++.|.|+++||+|||.++++|++|+....|..+...+|.++|||++|+|+++|+++++      
T Consensus         2 ka~~~~~~~~~l~~~~~~~p~~~~~evlV~v~a~~l~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~~~~   81 (361)
T cd08231           2 RAAVLTGPGKPLEIREVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRRPRVPLPIILGHEGVGRVVALGGGVTTDVAGEP   81 (361)
T ss_pred             eEEEEcCCCCCCEEEeccCCCCCCCeEEEEEEEEeecCccHHHhcCCCCCCCCCcccccCCceEEEEeCCCccccccCCc
Confidence            78999998877999999999999999999999999999999988876543456889999999999999999986      


Q ss_pred             CCCCCEEEecccCCCCCCcccccCCCCCCccc-c----------cccccceeeEEeecc-ceEECCCCCCccchhhcccc
Q 018529           86 LEVGDHVLPVFTGECGDCRHCRFSINGEPVNH-F----------LGTSTFSEYTVVHSG-CVAKINPLAPLDKVCILSCG  153 (354)
Q Consensus        86 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~-~----------~~~g~~a~~~~v~~~-~~~~~P~~~~~~~aa~l~~~  153 (354)
                      |++||+|++.+..+|++|..|..+....+... .          ...|+|+||+.++++ .++++|+++++.+++.++++
T Consensus        82 ~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~lP~~~~~~~aa~~~~~  161 (361)
T cd08231          82 LKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKKYGHEASCDDPHLSGGYAEHIYLPPGTAIVRVPDNVPDEVAAPANCA  161 (361)
T ss_pred             cCCCCEEEEcccCCCCCChhHhCcCccccccchhccccccccCCCCCcccceEEEecCCCceEECCCCCCHHHHHHhcCH
Confidence            99999999999999999999976643221110 1          124899999999996 79999999999999999899


Q ss_pred             hhhhhhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCC-hhHHHHH
Q 018529          154 VSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHD-RPIQEVI  232 (354)
Q Consensus       154 ~~~a~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~-~~~~~~i  232 (354)
                      ++|||+++.+....+++++|||+|+|++|++++++|+.+|+++|+++++++++.++++++|++.++++.+.+ .++.+.+
T Consensus       162 ~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i  241 (361)
T cd08231         162 LATVLAALDRAGPVGAGDTVVVQGAGPLGLYAVAAAKLAGARRVIVIDGSPERLELAREFGADATIDIDELPDPQRRAIV  241 (361)
T ss_pred             HHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCCeEEcCcccccHHHHHHH
Confidence            999999987666667999999999999999999999999997789999999999999999999988876543 2244567


Q ss_pred             HHHcCC-CccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhh-hccccEEEEEeccCCCCCCCHHHHH
Q 018529          233 AEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNYKPRTDLPSVV  310 (354)
Q Consensus       233 ~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~~~~~~~~~~  310 (354)
                      .+.+++ ++|++||++|+...+..++++++++ |+++.+|.........+.... +.+++++.+++...   .+++++++
T Consensus       242 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~  317 (361)
T cd08231         242 RDITGGRGADVVIEASGHPAAVPEGLELLRRG-GTYVLVGSVAPAGTVPLDPERIVRKNLTIIGVHNYD---PSHLYRAV  317 (361)
T ss_pred             HHHhCCCCCcEEEECCCChHHHHHHHHHhccC-CEEEEEcCCCCCCccccCHHHHhhcccEEEEcccCC---chhHHHHH
Confidence            788876 8999999998867889999999997 999999876432233333322 44888998876432   35789999


Q ss_pred             HHHHcc--CCCCCCceeeeeccccHHHHHHHHhcCCceeEEEec
Q 018529          311 DMYMNK--QLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISM  352 (354)
Q Consensus       311 ~~~~~~--~~~~~~~v~~~~~l~~~~~a~~~~~~~~~~k~vi~~  352 (354)
                      +++.++  .+.+.+.++++|+++|+++||+.+.+++.+|+||++
T Consensus       318 ~~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~k~vi~~  361 (361)
T cd08231         318 RFLERTQDRFPFAELVTHRYPLEDINEALELAESGTALKVVIDP  361 (361)
T ss_pred             HHHHhccCcCCchhheeeeeeHHHHHHHHHHHHcCCceEEEeCC
Confidence            999988  666777788999999999999999888778999863

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein

Probab=100.00  E-value=3.3e-48  Score=350.20  Aligned_cols=316  Identities=21%  Similarity=0.285  Sum_probs=261.2

Q ss_pred             eeeccCCC----ceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 018529           14 AVAWEAGK----PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG   89 (354)
Q Consensus        14 ~~~~~~~~----~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~G   89 (354)
                      +.+.+++.    .++++++|.|.|+++||+|||.++|+|++|++.+.|..+...+|.++|||++|+|+++|+++++|++|
T Consensus         2 ~~~~~~g~~~~~~l~~~~~p~P~~~~~evlVkv~~~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G   81 (329)
T TIGR02822         2 WEVERPGPIEDGPLRFVERPVPRPGPGELLVRVRACGVCRTDLHVSEGDLPVHRPRVTPGHEVVGEVAGRGADAGGFAVG   81 (329)
T ss_pred             eeeecCCcCCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCCCCCCCccCCcceEEEEEEECCCCcccCCC
Confidence            44555543    38899999999999999999999999999999998865444457899999999999999999999999


Q ss_pred             CEEEeccc-CCCCCCcccccCCC-CCCcccc---cccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhh
Q 018529           90 DHVLPVFT-GECGDCRHCRFSIN-GEPVNHF---LGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNV  164 (354)
Q Consensus        90 d~V~~~~~-~~~~~c~~c~~~~~-~~~~~~~---~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~  164 (354)
                      |+|++.+. ..|+.|++|+.+.. .|..+.+   ...|+|+||+.+|++.++++|+++++++++.+++++.+||+++ ..
T Consensus        82 d~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~~~~~~aa~l~~~~~ta~~~~-~~  160 (329)
T TIGR02822        82 DRVGIAWLRRTCGVCRYCRRGAENLCPASRYTGWDTDGGYAEYTTVPAAFAYRLPTGYDDVELAPLLCAGIIGYRAL-LR  160 (329)
T ss_pred             CEEEEcCccCcCCCChHHhCcCcccCCCcccCCcccCCcceeEEEeccccEEECCCCCCHHHhHHHhccchHHHHHH-Hh
Confidence            99987654 46999999976542 2332222   2358999999999999999999999999999999999999996 46


Q ss_pred             cCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEE
Q 018529          165 AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSV  244 (354)
Q Consensus       165 ~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~  244 (354)
                      +++++|++|||+|+|++|++++|+|+.+|+ +|++++++++|+++++++|+++++++.+..           .+++|+++
T Consensus       161 ~~~~~g~~VlV~G~g~iG~~a~~~a~~~G~-~vi~~~~~~~~~~~a~~~Ga~~vi~~~~~~-----------~~~~d~~i  228 (329)
T TIGR02822       161 ASLPPGGRLGLYGFGGSAHLTAQVALAQGA-TVHVMTRGAAARRLALALGAASAGGAYDTP-----------PEPLDAAI  228 (329)
T ss_pred             cCCCCCCEEEEEcCCHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHhCCceeccccccC-----------cccceEEE
Confidence            889999999999999999999999999999 799999999999999999999988754321           12689999


Q ss_pred             EcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhh-hccccEEEEEeccCCCCCCCHHHHHHHHHccCCCCCCc
Q 018529          245 ECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKF  323 (354)
Q Consensus       245 d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  323 (354)
                      ++.+....+..++++++++ |+++.+|...... ..+.... +.+++++.+++..   .++++.++++++.++++.+   
T Consensus       229 ~~~~~~~~~~~~~~~l~~~-G~~v~~G~~~~~~-~~~~~~~~~~~~~~i~g~~~~---~~~~~~~~~~l~~~g~i~~---  300 (329)
T TIGR02822       229 LFAPAGGLVPPALEALDRG-GVLAVAGIHLTDT-PPLNYQRHLFYERQIRSVTSN---TRADAREFLELAAQHGVRV---  300 (329)
T ss_pred             ECCCcHHHHHHHHHhhCCC-cEEEEEeccCccC-CCCCHHHHhhCCcEEEEeecC---CHHHHHHHHHHHHhCCCee---
Confidence            9988878999999999997 9999999753221 1233322 3478889887643   2346888999999998753   


Q ss_pred             eeeeeccccHHHHHHHHhcCCc-eeEEE
Q 018529          324 ITHRIPFSEINKAFEYMVKGEG-LRCII  350 (354)
Q Consensus       324 v~~~~~l~~~~~a~~~~~~~~~-~k~vi  350 (354)
                      ++++|+|+|+++|++.+.+++. +|+||
T Consensus       301 i~~~~~l~~~~~A~~~~~~~~~~Gkvvl  328 (329)
T TIGR02822       301 TTHTYPLSEADRALRDLKAGRFDGAAVL  328 (329)
T ss_pred             EEEEEeHHHHHHHHHHHHcCCCceEEEe
Confidence            5789999999999999988876 58776

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.

>PLN02514 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=7.1e-48  Score=352.04  Aligned_cols=329  Identities=22%  Similarity=0.326  Sum_probs=270.6

Q ss_pred             hcceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 018529           10 TCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG   89 (354)
Q Consensus        10 ~~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~G   89 (354)
                      .++|++.++++.++++++++.|+|+++||+|||.++++|++|++.+.|......+|.++|||++|+|+++|+++++|++|
T Consensus         9 ~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVrv~a~gi~~~D~~~~~g~~~~~~~p~i~G~E~~G~Vv~vG~~v~~~~~G   88 (357)
T PLN02514          9 KTTGWAARDPSGHLSPYTYTLRKTGPEDVVIKVIYCGICHTDLHQIKNDLGMSNYPMVPGHEVVGEVVEVGSDVSKFTVG   88 (357)
T ss_pred             eEEEEEEecCCCCceEEeecCCCCCCCcEEEEEEEeccChHHHHhhcCCcCcCCCCccCCceeeEEEEEECCCcccccCC
Confidence            37999999999999999999999999999999999999999999887755444568899999999999999999999999


Q ss_pred             CEEEecccC-CCCCCcccccCCCCCCccc-----------ccccccceeeEEeeccceEECCCCCCccchhhcccchhhh
Q 018529           90 DHVLPVFTG-ECGDCRHCRFSINGEPVNH-----------FLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTG  157 (354)
Q Consensus        90 d~V~~~~~~-~~~~c~~c~~~~~~~~~~~-----------~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a  157 (354)
                      |+|++.+.. .|++|++|+.+....+...           ....|+|+||+.+|.+.++++|+++++++|+.+++++.+|
T Consensus        89 d~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta  168 (357)
T PLN02514         89 DIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVYTDGKPTQGGFASAMVVDQKFVVKIPEGMAPEQAAPLLCAGVTV  168 (357)
T ss_pred             CEEEEcCccccCCCChhHhCCCcccCCCccccccccccCCccCCCccccEEEEchHHeEECCCCCCHHHhhhhhhhHHHH
Confidence            999865543 6999999987654332221           1235899999999999999999999999999999999999


Q ss_pred             hhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHH-HHhcCCceEEcCCCCChhHHHHHHHHc
Q 018529          158 LGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEE-AKKFGVTDFVNTSEHDRPIQEVIAEMT  236 (354)
Q Consensus       158 ~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~-~~~lg~~~v~~~~~~~~~~~~~i~~~~  236 (354)
                      |+++......++|++|+|+|+|++|++++|+|+.+|+ +|+++++++++.+. ++++|++.+++..+.     +.+.+.+
T Consensus       169 ~~al~~~~~~~~g~~vlV~G~G~vG~~av~~Ak~~G~-~vi~~~~~~~~~~~~~~~~Ga~~~i~~~~~-----~~~~~~~  242 (357)
T PLN02514        169 YSPLSHFGLKQSGLRGGILGLGGVGHMGVKIAKAMGH-HVTVISSSDKKREEALEHLGADDYLVSSDA-----AEMQEAA  242 (357)
T ss_pred             HHHHHHcccCCCCCeEEEEcccHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHhcCCcEEecCCCh-----HHHHHhc
Confidence            9997666667899999999999999999999999999 77777777766654 467999887765432     2344444


Q ss_pred             CCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchh-hhccccEEEEEeccCCCCCCCHHHHHHHHHc
Q 018529          237 NGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI-NVLNERTLKGTFFGNYKPRTDLPSVVDMYMN  315 (354)
Q Consensus       237 ~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~-~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~  315 (354)
                      . ++|++||++|....+..++++++++ |+++.+|.....  ..+... .+.+++++.|++....   .++.++++++.+
T Consensus       243 ~-~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~--~~~~~~~~~~~~~~i~g~~~~~~---~~~~~~~~~~~~  315 (357)
T PLN02514        243 D-SLDYIIDTVPVFHPLEPYLSLLKLD-GKLILMGVINTP--LQFVTPMLMLGRKVITGSFIGSM---KETEEMLEFCKE  315 (357)
T ss_pred             C-CCcEEEECCCchHHHHHHHHHhccC-CEEEEECCCCCC--CcccHHHHhhCCcEEEEEecCCH---HHHHHHHHHHHh
Confidence            3 6999999999877899999999997 999999976432  223322 2448899999875432   468999999999


Q ss_pred             cCCCCCCceeeeeccccHHHHHHHHhcCCc-eeEEEecCC
Q 018529          316 KQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISMED  354 (354)
Q Consensus       316 ~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~~~d  354 (354)
                      ++++  +.+ ++|+|+|+.+||+.+.+++. +|+||.+++
T Consensus       316 g~l~--~~i-~~~~l~~~~~A~~~~~~~~~~gk~v~~~~~  352 (357)
T PLN02514        316 KGLT--SMI-EVVKMDYVNTAFERLEKNDVRYRFVVDVAG  352 (357)
T ss_pred             CCCc--CcE-EEEcHHHHHHHHHHHHcCCCceeEEEEccc
Confidence            9754  445 68999999999999998886 699998753

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=100.00  E-value=1.4e-47  Score=350.15  Aligned_cols=330  Identities=30%  Similarity=0.494  Sum_probs=278.9

Q ss_pred             cceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCC-----------CCCCCcccccceeEEEEEe
Q 018529           11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ-----------TPLFPRIFGHEAAGVVESV   79 (354)
Q Consensus        11 ~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~-----------~~~~p~~~G~e~~G~V~~v   79 (354)
                      |||+++.++++ +++++++.|+|.++||+||+.++++|++|+....+...           ...+|.++|||++|+|+++
T Consensus         1 mka~~~~~~~~-l~~~~~~~p~~~~~evlV~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~v   79 (351)
T cd08233           1 MKAARYHGRKD-IRVEEVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFSGVVVEV   79 (351)
T ss_pred             CceEEEecCCc-eEEEeccCCCCCCCeEEEEEEEEEECccchHhhcCCCccccccccccccccCCCceecccceEEEEEe
Confidence            78999988776 99999999999999999999999999999876653211           1236889999999999999


Q ss_pred             CCCCCCCCCCCEEEecccCCCCCCcccccCCCC-CCccccc----ccccceeeEEeeccceEECCCCCCccchhhcccch
Q 018529           80 GEGVSDLEVGDHVLPVFTGECGDCRHCRFSING-EPVNHFL----GTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGV  154 (354)
Q Consensus        80 G~~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~-~~~~~~~----~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~  154 (354)
                      |+++++|++||+|++.+..+|++|.+|+.+... +...++.    ..|+|++|+.++.+.++++|+++++++++.+ .++
T Consensus        80 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~~~~~~aa~~-~~~  158 (351)
T cd08233          80 GSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGFIGLGGGGGGFAEYVVVPAYHVHKLPDNVPLEEAALV-EPL  158 (351)
T ss_pred             CCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCCceeccCCCCCceeeEEEechHHeEECcCCCCHHHhhhc-cHH
Confidence            999999999999999999999999999765432 2222221    2589999999999999999999999998876 578


Q ss_pred             hhhhhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHH
Q 018529          155 STGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAE  234 (354)
Q Consensus       155 ~~a~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~  234 (354)
                      .+||+++ ...++++|++|||+|+|.+|.+++|+|+.+|+++|+++++++++.++++++|++.++++.+.+  +.+.+++
T Consensus       159 ~ta~~~l-~~~~~~~g~~vlI~g~g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~--~~~~l~~  235 (351)
T cd08233         159 AVAWHAV-RRSGFKPGDTALVLGAGPIGLLTILALKAAGASKIIVSEPSEARRELAEELGATIVLDPTEVD--VVAEVRK  235 (351)
T ss_pred             HHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCCccC--HHHHHHH
Confidence            8999996 778899999999999999999999999999997889999999999999999999999887765  8888888


Q ss_pred             HcCC-CccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhh-hccccEEEEEeccCCCCCCCHHHHHHH
Q 018529          235 MTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNYKPRTDLPSVVDM  312 (354)
Q Consensus       235 ~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~  312 (354)
                      ++++ ++|++||++|....+..++++++++ |+++.+|.....  ..+.... +.+++++.+++...   .+++++++++
T Consensus       236 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~~  309 (351)
T cd08233         236 LTGGGGVDVSFDCAGVQATLDTAIDALRPR-GTAVNVAIWEKP--ISFNPNDLVLKEKTLTGSICYT---REDFEEVIDL  309 (351)
T ss_pred             HhCCCCCCEEEECCCCHHHHHHHHHhccCC-CEEEEEccCCCC--CccCHHHHHhhCcEEEEEeccC---cchHHHHHHH
Confidence            8877 7999999999877899999999997 999999976522  2333332 34889999876432   3679999999


Q ss_pred             HHccCCCCCCceeeeeccccH-HHHHHHHhcCCc--eeEEEe
Q 018529          313 YMNKQLELEKFITHRIPFSEI-NKAFEYMVKGEG--LRCIIS  351 (354)
Q Consensus       313 ~~~~~~~~~~~v~~~~~l~~~-~~a~~~~~~~~~--~k~vi~  351 (354)
                      +.++++++.+.++++|+++|+ ++|++.+.+++.  +|+||.
T Consensus       310 ~~~g~l~~~~~i~~~~~l~e~~~~a~~~~~~~~~~~~k~v~~  351 (351)
T cd08233         310 LASGKIDAEPLITSRIPLEDIVEKGFEELINDKEQHVKILVS  351 (351)
T ss_pred             HHcCCCChHHheEEEecHHHHHHHHHHHHHhCCCCceEEEeC
Confidence            999999877778899999996 799999988774  688763

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase

Probab=100.00  E-value=1e-46  Score=345.82  Aligned_cols=337  Identities=37%  Similarity=0.648  Sum_probs=282.4

Q ss_pred             hhcceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCCC
Q 018529            9 LTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEV   88 (354)
Q Consensus         9 ~~~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~   88 (354)
                      |+|||+++.+++.++++++.+.|+++++||+|||.++++|++|+....+..+ ..+|.++|||++|+|+++|+++.++++
T Consensus         1 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~~v~Vkv~a~gi~~~d~~~~~g~~~-~~~p~v~G~e~~G~V~~vG~~v~~~~~   79 (365)
T cd08278           1 MKTTAAVVREPGGPFVLEDVELDDPRPDEVLVRIVATGICHTDLVVRDGGLP-TPLPAVLGHEGAGVVEAVGSAVTGLKP   79 (365)
T ss_pred             CccEEeeeccCCCcceEEEeecCCCCCCeEEEEEEEeecCcccHHHhcCCCC-CCCCcccccceeEEEEEeCCCcccCCC
Confidence            6899999999777799999999999999999999999999999999877554 346889999999999999999999999


Q ss_pred             CCEEEecccCCCCCCcccccCCCCCCcc---------------------------cccccccceeeEEeeccceEECCCC
Q 018529           89 GDHVLPVFTGECGDCRHCRFSINGEPVN---------------------------HFLGTSTFSEYTVVHSGCVAKINPL  141 (354)
Q Consensus        89 Gd~V~~~~~~~~~~c~~c~~~~~~~~~~---------------------------~~~~~g~~a~~~~v~~~~~~~~P~~  141 (354)
                      ||+|++.+. .|+.|.+|..+..+.+..                           .....|+|++|+.++++.++++|++
T Consensus        80 Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~iP~~  158 (365)
T cd08278          80 GDHVVLSFA-SCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKVDKD  158 (365)
T ss_pred             CCEEEEccc-CCCCChHHhCCCcccccCcccccccccccCCcccccccCCcccccccccccceeeEEEecchhEEECCCC
Confidence            999998764 899999997654321110                           0223589999999999999999999


Q ss_pred             CCccchhhcccchhhhhhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcC
Q 018529          142 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT  221 (354)
Q Consensus       142 ~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~  221 (354)
                      +++++++.+++++.+||.++...+.++++++|||+|+|++|++++|+|+.+|++.|+++++++++.+.++++|++.++++
T Consensus       159 ~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~vG~~~~~la~~~G~~~v~~~~~~~~k~~~~~~~g~~~~i~~  238 (365)
T cd08278         159 VPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFGAGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAKELGATHVINP  238 (365)
T ss_pred             CCHHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCcEEecC
Confidence            99999999999999999998788899999999999889999999999999999779999999999999999999999887


Q ss_pred             CCCChhHHHHHHHHcCCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhh-ccccEEEEEeccCC
Q 018529          222 SEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFFGNY  300 (354)
Q Consensus       222 ~~~~~~~~~~i~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~  300 (354)
                      .+.+  +.+.+.+++++++|+++||+|+...+..++++++++ |+++.+|.........+....+ .+++++.++.....
T Consensus       239 ~~~~--~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (365)
T cd08278         239 KEED--LVAAIREITGGGVDYALDTTGVPAVIEQAVDALAPR-GTLALVGAPPPGAEVTLDVNDLLVSGKTIRGVIEGDS  315 (365)
T ss_pred             CCcC--HHHHHHHHhCCCCcEEEECCCCcHHHHHHHHHhccC-CEEEEeCcCCCCCccccCHHHHhhcCceEEEeecCCc
Confidence            6654  777788877449999999999778899999999997 9999998753222233444444 57888888765433


Q ss_pred             CCCCCHHHHHHHHHccCCCCCCceeeeeccccHHHHHHHHhcCCceeEEEe
Q 018529          301 KPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIIS  351 (354)
Q Consensus       301 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~~k~vi~  351 (354)
                      ...+.++++++++.++++.+.+. .+.|+++++.+|++.+.+++..|++|+
T Consensus       316 ~~~~~~~~~~~~l~~g~l~~~~~-~~~~~l~~~~~a~~~~~~~~~~k~~~~  365 (365)
T cd08278         316 VPQEFIPRLIELYRQGKFPFDKL-VTFYPFEDINQAIADSESGKVIKPVLR  365 (365)
T ss_pred             ChHHHHHHHHHHHHcCCCChHHh-eEEecHHHHHHHHHHHHCCCceEEEEC
Confidence            33345788999999998754333 358999999999999998887898874

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=100.00  E-value=5.2e-47  Score=352.29  Aligned_cols=331  Identities=18%  Similarity=0.217  Sum_probs=264.6

Q ss_pred             hhcceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhh-ccCCCC------CCCCcccccceeEEEEEeCC
Q 018529            9 LTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFW-ESKGQT------PLFPRIFGHEAAGVVESVGE   81 (354)
Q Consensus         9 ~~~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~-~~~~~~------~~~p~~~G~e~~G~V~~vG~   81 (354)
                      |+|||++++++++ ++++++|.|+|+++||+|||.++|+|++|++.+ .|....      ..+|.++|||++|+|+++|+
T Consensus         1 m~~~a~~~~~~~~-l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~g~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~   79 (410)
T cd08238           1 MKTKAWRMYGKGD-LRLEKFELPEIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHEFAGTILKVGK   79 (410)
T ss_pred             CCcEEEEEEcCCc-eEEEecCCCCCCCCeEEEEEEEeccCCCCHHHHhcCCccccCcccccCCCceeccccEEEEEEeCC
Confidence            6899999999886 999999999999999999999999999999976 343211      23688999999999999999


Q ss_pred             CCC-CCCCCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeecc----ceEECCCCCCccchhhc-ccch-
Q 018529           82 GVS-DLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSG----CVAKINPLAPLDKVCIL-SCGV-  154 (354)
Q Consensus        82 ~~~-~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~----~~~~~P~~~~~~~aa~l-~~~~-  154 (354)
                      +++ +|++||||++.+...|++|..|..       .+....|+|+||+.++++    .++++|+++++++|+.+ +.+. 
T Consensus        80 ~v~~~~~vGdrV~~~~~~~c~~~~~c~~-------~g~~~~G~~aey~~v~~~~~~~~~~~lP~~l~~~~aal~epl~~~  152 (410)
T cd08238          80 KWQGKYKPGQRFVIQPALILPDGPSCPG-------YSYTYPGGLATYHIIPNEVMEQDCLLIYEGDGYAEASLVEPLSCV  152 (410)
T ss_pred             CccCCCCCCCEEEEcCCcCCCCCCCCCC-------ccccCCCcceEEEEecHHhccCCeEECCCCCCHHHHhhcchHHHH
Confidence            998 599999999999999999988831       122346999999999987    68999999999998865 2111 


Q ss_pred             hhhhhhh--------hhhcCCCCCCeEEEEcC-ChhHHHHHHHHHHcC--CcEEEEEcCChhhHHHHHhc--------CC
Q 018529          155 STGLGAT--------LNVAKPERGSSVAVFGL-GAVGLAAAEGARIAG--ASRIIGVDRSSKRFEEAKKF--------GV  215 (354)
Q Consensus       155 ~~a~~~l--------~~~~~~~~~~~vlI~G~-g~~G~~a~~~a~~~g--~~~vi~v~~~~~~~~~~~~l--------g~  215 (354)
                      .+++.++        .+.+++++|++|+|+|+ |++|++++|+|+.+|  +.+|++++++++|+++++++        |+
T Consensus       153 ~~~~~a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~~~~~~~~~~Ga  232 (410)
T cd08238         153 IGAYTANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQRLFPPEAASRGI  232 (410)
T ss_pred             HHHhhhcccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHHhccccccccCc
Confidence            1233332        24578899999999985 999999999999975  45799999999999999997        66


Q ss_pred             c-eEEcCCCCChhHHHHHHHHcCC-CccEEEEcccChHhHHHHHHHhhCCCceEEEEcCC-CCCceeecchhh-hccccE
Q 018529          216 T-DFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVP-SKDAVFMTKPIN-VLNERT  291 (354)
Q Consensus       216 ~-~v~~~~~~~~~~~~~i~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~-~~~~~~~~~~~~-~~~~~~  291 (354)
                      + .++++.+. .++.+.+++++++ ++|++||++|++..+..++++++++ |+++.++.. .......+.... +.++++
T Consensus       233 ~~~~i~~~~~-~~~~~~v~~~t~g~g~D~vid~~g~~~~~~~a~~~l~~~-G~~v~~~g~~~~~~~~~~~~~~~~~~~~~  310 (410)
T cd08238         233 ELLYVNPATI-DDLHATLMELTGGQGFDDVFVFVPVPELVEEADTLLAPD-GCLNFFAGPVDKNFSAPLNFYNVHYNNTH  310 (410)
T ss_pred             eEEEECCCcc-ccHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhccC-CeEEEEEccCCCCccccccHHHhhhcCcE
Confidence            6 45665442 2377788888877 8999999999888999999999997 877766432 211112333333 348899


Q ss_pred             EEEEeccCCCCCCCHHHHHHHHHccCCCCCCceeeeeccccHHHHHHHHhcCCceeEEEec
Q 018529          292 LKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISM  352 (354)
Q Consensus       292 i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~~k~vi~~  352 (354)
                      +.|++...   +++++++++++.+|++++.++++++|+|+|+++|++.+..+..+|+||.+
T Consensus       311 i~g~~~~~---~~~~~~~~~li~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~gKvvl~~  368 (410)
T cd08238         311 YVGTSGGN---TDDMKEAIDLMAAGKLNPARMVTHIGGLNAAAETTLNLPGIPGGKKLIYT  368 (410)
T ss_pred             EEEeCCCC---HHHHHHHHHHHHcCCCchhhcEEEEecHHHHHHHHHHhhccCCceEEEEC
Confidence            99976432   35789999999999999988999999999999999999844457988876

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases

Probab=100.00  E-value=2.2e-46  Score=343.57  Aligned_cols=339  Identities=49%  Similarity=0.864  Sum_probs=287.5

Q ss_pred             cceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 018529           11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD   90 (354)
Q Consensus        11 ~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd   90 (354)
                      +||+++.+.+.++++++.+.|.++++||+|++.++++|++|++...+... ..+|.++|||++|+|+++|++++.+++||
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~p~~~~~~vlv~v~~~~i~~~d~~~~~g~~~-~~~~~i~g~e~~G~V~~vG~~v~~~~~Gd   79 (365)
T cd05279           1 CKAAVLWEKGKPLSIEEIEVAPPKAGEVRIKVVATGVCHTDLHVIDGKLP-TPLPVILGHEGAGIVESIGPGVTTLKPGD   79 (365)
T ss_pred             CceeEEecCCCCcEEEEeecCCCCCCeEEEEEEEeeecchhHHHhcCCCC-CCCCcccccceeEEEEEeCCCcccCCCCC
Confidence            47899998887799999999999999999999999999999998877543 34578999999999999999999999999


Q ss_pred             EEEecccCCCCCCcccccCCCCCC-c------------------------ccccccccceeeEEeeccceEECCCCCCcc
Q 018529           91 HVLPVFTGECGDCRHCRFSINGEP-V------------------------NHFLGTSTFSEYTVVHSGCVAKINPLAPLD  145 (354)
Q Consensus        91 ~V~~~~~~~~~~c~~c~~~~~~~~-~------------------------~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~  145 (354)
                      +|++.+...|++|.+|+.+....+ .                        +++.+.|+|++|+.++++.++++|++++++
T Consensus        80 ~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~~~~~  159 (365)
T cd05279          80 KVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKIDPDAPLE  159 (365)
T ss_pred             EEEEcCCCCCCCChhhcCCCcccCCCcccccccccccCCcceeeccCCccccccccccccceEEecCCceEECCCCCCHH
Confidence            999999999999999975442211 0                        112235799999999999999999999999


Q ss_pred             chhhcccchhhhhhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCC
Q 018529          146 KVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHD  225 (354)
Q Consensus       146 ~aa~l~~~~~~a~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~  225 (354)
                      +++.+.+++.+||+++.+.+++++|++|||+|+|++|++++++|+.+|+..|+++++++++.++++++|++.+++..+.+
T Consensus       160 ~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~a~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~  239 (365)
T cd05279         160 KVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQLGATECINPRDQD  239 (365)
T ss_pred             HhhHhccchhHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCCeeccccccc
Confidence            99999999999999988888999999999998899999999999999996688888899999999999999888877653


Q ss_pred             hhHHHHHHHHcCCCccEEEEcccChHhHHHHHHHhh-CCCceEEEEcCCCCCceeecchhhhccccEEEEEeccCCCCCC
Q 018529          226 RPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVH-DGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRT  304 (354)
Q Consensus       226 ~~~~~~i~~~~~~~~dvv~d~~g~~~~~~~~~~~l~-~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~  304 (354)
                      .++.+.+.+++++++|++||++|....+..++++++ ++ |+++.+|.........+....+.++.++.|++...+...+
T Consensus       240 ~~~~~~l~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~  318 (365)
T cd05279         240 KPIVEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGG-GTSVVVGVPPSGTEATLDPNDLLTGRTIKGTVFGGWKSKD  318 (365)
T ss_pred             chHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhccCC-CEEEEEecCCCCCceeeCHHHHhcCCeEEEEeccCCchHh
Confidence            247777887775699999999987788999999999 87 9999998754222334444434577788888776666667


Q ss_pred             CHHHHHHHHHccCCCCCCceeeeeccccHHHHHHHHhcCCceeEEEe
Q 018529          305 DLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIIS  351 (354)
Q Consensus       305 ~~~~~~~~~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~~k~vi~  351 (354)
                      .+..+++++.++.+.+.+.+.++++++++.+||+.+.+++..|++++
T Consensus       319 ~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~~~~  365 (365)
T cd05279         319 SVPKLVALYRQKKFPLDELITHVLPFEEINDGFDLMRSGESIRTILT  365 (365)
T ss_pred             HHHHHHHHHHcCCcchhHheeeeecHHHHHHHHHHHhCCCceeeeeC
Confidence            89999999999988876678899999999999999988877888774

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall

>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase

Probab=100.00  E-value=3.3e-47  Score=345.55  Aligned_cols=320  Identities=17%  Similarity=0.200  Sum_probs=248.1

Q ss_pred             hhcceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCC----CCCCcccccceeEEEEEeCCCCC
Q 018529            9 LTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT----PLFPRIFGHEAAGVVESVGEGVS   84 (354)
Q Consensus         9 ~~~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~----~~~p~~~G~e~~G~V~~vG~~~~   84 (354)
                      |..++++++++++ ++++++|.|+ +++||+|||.++|||++|++++.|....    ..+|.++|||++|+|+++|.+  
T Consensus         1 ~~~~~~~~~~~~~-~~~~~~~~P~-~~~eVlVkv~a~gIc~sD~~~~~G~~~~~~~~~~~P~i~GhE~~G~V~~~g~~--   76 (341)
T cd08237           1 MINQVYRLVRPKF-FEVTYEEENL-REDWVIVRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHEGIGVVVSDPTG--   76 (341)
T ss_pred             CcccceEEeccce-EEEeecCCCC-CCCeEEEEEEEEEEcCccHHHHcCCCCcccccCCCCeeccceeEEEEEeeCCC--
Confidence            4568999999987 9999999995 9999999999999999999999886432    357999999999999998875  


Q ss_pred             CCCCCCEEEecccCCCCCCccccc-CCCCCCc-ccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhh
Q 018529           85 DLEVGDHVLPVFTGECGDCRHCRF-SINGEPV-NHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATL  162 (354)
Q Consensus        85 ~~~~Gd~V~~~~~~~~~~c~~c~~-~~~~~~~-~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~  162 (354)
                      +|++||||++.+..+|+ |..|.. .++.+.. .+....|+|+||+.+|++.++++|+++++++|+.+ .+++++|+++.
T Consensus        77 ~~~vGdrV~~~~~~~~~-~~~~~~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~vP~~l~~~~aa~~-~~~~~a~~a~~  154 (341)
T cd08237          77 TYKVGTKVVMVPNTPVE-KDEIIPENYLPSSRFRSSGYDGFMQDYVFLPPDRLVKLPDNVDPEVAAFT-ELVSVGVHAIS  154 (341)
T ss_pred             ccCCCCEEEECCCCCch-hcccchhccCCCcceeEecCCCceEEEEEEchHHeEECCCCCChHHhhhh-chHHHHHHHHH
Confidence            79999999999888887 445532 2222111 11123589999999999999999999999887755 48888999864


Q ss_pred             h--hcCCCCCCeEEEEcCChhHHHHHHHHHH-cCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC-
Q 018529          163 N--VAKPERGSSVAVFGLGAVGLAAAEGARI-AGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-  238 (354)
Q Consensus       163 ~--~~~~~~~~~vlI~G~g~~G~~a~~~a~~-~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-  238 (354)
                      .  ...+++|++|||+|+|++|++++|+|+. .|..+|++++++++|++++++++.+..++  +    +       ..+ 
T Consensus       155 ~~~~~~~~~g~~VlV~G~G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~~~~~~~~~~--~----~-------~~~~  221 (341)
T cd08237         155 RFEQIAHKDRNVIGVWGDGNLGYITALLLKQIYPESKLVVFGKHQEKLDLFSFADETYLID--D----I-------PEDL  221 (341)
T ss_pred             HHhhcCCCCCCEEEEECCCHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHhhcCceeehh--h----h-------hhcc
Confidence            3  3457899999999999999999999996 66558999999999999998876643221  0    1       112 


Q ss_pred             CccEEEEcccC---hHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhh-hccccEEEEEeccCCCCCCCHHHHHHHHH
Q 018529          239 GVDRSVECTGN---IDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNYKPRTDLPSVVDMYM  314 (354)
Q Consensus       239 ~~dvv~d~~g~---~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~~~  314 (354)
                      ++|+|||++|+   +..+..++++++++ |+++++|.....  ..+.... +.+++++.|+....   .++++++++++.
T Consensus       222 g~d~viD~~G~~~~~~~~~~~~~~l~~~-G~iv~~G~~~~~--~~~~~~~~~~k~~~i~g~~~~~---~~~~~~~~~~~~  295 (341)
T cd08237         222 AVDHAFECVGGRGSQSAINQIIDYIRPQ-GTIGLMGVSEYP--VPINTRMVLEKGLTLVGSSRST---REDFERAVELLS  295 (341)
T ss_pred             CCcEEEECCCCCccHHHHHHHHHhCcCC-cEEEEEeecCCC--cccCHHHHhhCceEEEEecccC---HHHHHHHHHHHH
Confidence            69999999994   46789999999997 999999975422  2333332 45899999976432   256899999999


Q ss_pred             cc---CCCCCCceeeeeccc---cHHHHHHHHhcCCceeEEEecC
Q 018529          315 NK---QLELEKFITHRIPFS---EINKAFEYMVKGEGLRCIISME  353 (354)
Q Consensus       315 ~~---~~~~~~~v~~~~~l~---~~~~a~~~~~~~~~~k~vi~~~  353 (354)
                      ++   +..+.++++++|+|+   ++.++|+...++..+|+||.++
T Consensus       296 ~~~~~~~~l~~~i~~~~~l~~l~~~~~a~~~~~~~~~gKvvi~~~  340 (341)
T cd08237         296 RNPEVAEYLRKLVGGVFPVRSINDIHRAFESDLTNSWGKTVMEWE  340 (341)
T ss_pred             hCCcccCChHHHhccccccccHHHHHHHHHHHhhcCcceEEEEee
Confidence            98   346778899999986   5566665555544579998764

NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (

>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases

Probab=100.00  E-value=1.3e-45  Score=337.25  Aligned_cols=335  Identities=25%  Similarity=0.344  Sum_probs=277.7

Q ss_pred             cceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 018529           11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD   90 (354)
Q Consensus        11 ~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd   90 (354)
                      |||+++.+++. +++.+.+.|.+.++||+|||.++++|++|++...+.......|.++|||++|+|+++|++++++++||
T Consensus         1 mka~~~~~~~~-~~l~~~~~p~~~~~evlIkv~a~~i~~~d~~~~~g~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd   79 (351)
T cd08285           1 MKAFAMLGIGK-VGWIEKPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGAPGERHGMILGHEAVGVVEEVGSEVKDFKPGD   79 (351)
T ss_pred             CceEEEccCCc-cEEEECCCCCCCCCeEEEEEEEEEechhhHHHhcCCCCCCCCCcccCcceEEEEEEecCCcCccCCCC
Confidence            79999999886 88999999989999999999999999999988777554445688999999999999999999999999


Q ss_pred             EEEecccCCCCCCcccccCCCCCCcc-------cccccccceeeEEeecc--ceEECCCCCCccchhhcccchhhhhhhh
Q 018529           91 HVLPVFTGECGDCRHCRFSINGEPVN-------HFLGTSTFSEYTVVHSG--CVAKINPLAPLDKVCILSCGVSTGLGAT  161 (354)
Q Consensus        91 ~V~~~~~~~~~~c~~c~~~~~~~~~~-------~~~~~g~~a~~~~v~~~--~~~~~P~~~~~~~aa~l~~~~~~a~~~l  161 (354)
                      +|++.+..+|++|..|..+....+..       .....|+|+||+.++.+  .++++|+++++++++.+++.+.+||++ 
T Consensus        80 ~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~ta~~~-  158 (351)
T cd08285          80 RVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKFSNFKDGVFAEYFHVNDADANLAPLPDGLTDEQAVMLPDMMSTGFHG-  158 (351)
T ss_pred             EEEEcCcCCCCCCHHHHCcCcccCcCCCCCccccCCCCcceeEEEEcchhhCceEECCCCCCHHHhhhhccchhhHHHH-
Confidence            99998888999999997665322111       11235899999999974  899999999999999999999999998 


Q ss_pred             hhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC-Cc
Q 018529          162 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GV  240 (354)
Q Consensus       162 ~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~~  240 (354)
                      ...+.++++++|||+|+|++|++++|+|+.+|+..|+++++++++.++++++|++.++++.+.+  +.+.+.+++.+ ++
T Consensus       159 ~~~~~~~~g~~vlI~g~g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~--~~~~i~~~~~~~~~  236 (351)
T cd08285         159 AELANIKLGDTVAVFGIGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGATDIVDYKNGD--VVEQILKLTGGKGV  236 (351)
T ss_pred             HHccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCceEecCCCCC--HHHHHHHHhCCCCC
Confidence            4778999999999998899999999999999997799999999999999999999999887655  77778777766 89


Q ss_pred             cEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhh---hccccEEEEEeccCCCCCCCHHHHHHHHHccC
Q 018529          241 DRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN---VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQ  317 (354)
Q Consensus       241 dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~---~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~  317 (354)
                      |++||++|++..+..++++++++ |+++.+|.........+....   ..+..++.+.+..  ...++++++++++.+|+
T Consensus       237 d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~~~~g~  313 (351)
T cd08285         237 DAVIIAGGGQDTFEQALKVLKPG-GTISNVNYYGEDDYLPIPREEWGVGMGHKTINGGLCP--GGRLRMERLASLIEYGR  313 (351)
T ss_pred             cEEEECCCCHHHHHHHHHHhhcC-CEEEEecccCCCceeecChhhhhhhccccEEEEeecC--CccccHHHHHHHHHcCC
Confidence            99999999878899999999997 999999876532222332111   1345566654321  12367999999999999


Q ss_pred             CCCCC-ceeeeeccccHHHHHHHHhcCCc--eeEEEec
Q 018529          318 LELEK-FITHRIPFSEINKAFEYMVKGEG--LRCIISM  352 (354)
Q Consensus       318 ~~~~~-~v~~~~~l~~~~~a~~~~~~~~~--~k~vi~~  352 (354)
                      +++.. .+.+.|+++++++|++.+.+++.  .|++|.+
T Consensus       314 i~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~~  351 (351)
T cd08285         314 VDPSKLLTHHFFGFDDIEEALMLMKDKPDDLIKPVIIF  351 (351)
T ss_pred             CChhhceeccccCHHHHHHHHHHHhcccCCeEEEEEeC
Confidence            88743 34456999999999999988763  6998864

This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase

Probab=100.00  E-value=6.1e-45  Score=334.01  Aligned_cols=336  Identities=40%  Similarity=0.693  Sum_probs=285.0

Q ss_pred             cceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 018529           11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD   90 (354)
Q Consensus        11 ~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd   90 (354)
                      |||+++.+++.++++.+++.|+++++||+|++.++++|+.|+..+.+..+ ..+|.++|+|++|+|+++|++++.|++||
T Consensus         1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~i~~~d~~~~~g~~~-~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd   79 (363)
T cd08279           1 MRAAVLHEVGKPLEIEEVELDDPGPGEVLVRIAAAGLCHSDLHVVTGDLP-APLPAVLGHEGAGVVEEVGPGVTGVKPGD   79 (363)
T ss_pred             CeEEEEecCCCCceEEEeeCCCCCCCeEEEEEEEeecCcHHHHHhcCCCC-CCCCccccccceEEEEEeCCCccccCCCC
Confidence            79999999987899999999999999999999999999999998877554 34577899999999999999999999999


Q ss_pred             EEEecccCCCCCCcccccCCCCCCccc------------------------ccccccceeeEEeeccceEECCCCCCccc
Q 018529           91 HVLPVFTGECGDCRHCRFSINGEPVNH------------------------FLGTSTFSEYTVVHSGCVAKINPLAPLDK  146 (354)
Q Consensus        91 ~V~~~~~~~~~~c~~c~~~~~~~~~~~------------------------~~~~g~~a~~~~v~~~~~~~~P~~~~~~~  146 (354)
                      +|++.+..+|++|.+|+.+..+.+...                        ....|+|++|+.++++.++++|+++++++
T Consensus        80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~  159 (363)
T cd08279          80 HVVLSWIPACGTCRYCSRGQPNLCDLGAGILGGQLPDGTRRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIPLDR  159 (363)
T ss_pred             EEEECCCCCCCCChhhcCCCcccCcccccccccccCCCcccccccCccccccccCccceeeEEeccccEEECCCCCChHH
Confidence            999999999999999987665443221                        13458999999999999999999999999


Q ss_pred             hhhcccchhhhhhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCCh
Q 018529          147 VCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDR  226 (354)
Q Consensus       147 aa~l~~~~~~a~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~  226 (354)
                      ++.+++++.+||.++....+++++++|||+|+|++|++++++|+..|+.+|+++++++++.++++++|++++++....+ 
T Consensus       160 aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g~g~vG~a~i~lak~~G~~~Vi~~~~~~~~~~~~~~~g~~~vv~~~~~~-  238 (363)
T cd08279         160 AALLGCGVTTGVGAVVNTARVRPGDTVAVIGCGGVGLNAIQGARIAGASRIIAVDPVPEKLELARRFGATHTVNASEDD-  238 (363)
T ss_pred             eehhcchhHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHhCCeEEeCCCCcc-
Confidence            9999999999999988888999999999998899999999999999995599999999999999999998888876654 


Q ss_pred             hHHHHHHHHcCC-CccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhhc-cccEEEEEeccCCCCCC
Q 018529          227 PIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTFFGNYKPRT  304 (354)
Q Consensus       227 ~~~~~i~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g~~~~~~~~~~  304 (354)
                       +..++.+++.+ ++|++||++++...+..++++++++ |+++.++.........+....+. ++..+.++.++.....+
T Consensus       239 -~~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  316 (363)
T cd08279         239 -AVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKG-GTAVVVGMGPPGETVSLPALELFLSEKRLQGSLYGSANPRR  316 (363)
T ss_pred             -HHHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcC-CeEEEEecCCCCcccccCHHHHhhcCcEEEEEEecCcCcHH
Confidence             77778887755 8999999999767889999999997 99999986542222333333333 67777777654434446


Q ss_pred             CHHHHHHHHHccCCCCCCceeeeeccccHHHHHHHHhcCCceeEEE
Q 018529          305 DLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCII  350 (354)
Q Consensus       305 ~~~~~~~~~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~~k~vi  350 (354)
                      .++++++++.++++.+.+.+.++|+++++++|++.+.+++..|.||
T Consensus       317 ~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~  362 (363)
T cd08279         317 DIPRLLDLYRAGRLKLDELVTRRYSLDEINEAFADMLAGENARGVI  362 (363)
T ss_pred             HHHHHHHHHHcCCCCcceeEEEEEcHHHHHHHHHHHhcCCceeEEe
Confidence            7889999999998877655778999999999999999888777665

Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me

>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase

Probab=100.00  E-value=1.1e-45  Score=330.79  Aligned_cols=303  Identities=20%  Similarity=0.270  Sum_probs=240.7

Q ss_pred             hcceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecC-ccchhhhccCCCC---CCCCcccccceeEEEEEeCCCCCC
Q 018529           10 TCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLC-RTDLYFWESKGQT---PLFPRIFGHEAAGVVESVGEGVSD   85 (354)
Q Consensus        10 ~~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~-~~D~~~~~~~~~~---~~~p~~~G~e~~G~V~~vG~~~~~   85 (354)
                      +|||+++.+++. +++.+.+.|+|+++||+|||.++||| ++|++.+.|..+.   ..+|.++|||++|+|+++|+++ +
T Consensus         1 ~~ka~~~~~~~~-l~~~e~~~p~~~~~evlVkv~~~gi~~~~D~~~~~G~~~~~~~~~~P~i~GhE~~G~V~~vG~~v-~   78 (308)
T TIGR01202         1 KTQAIVLSGPNQ-IELREVTLTPPSPGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYESVGRVVEAGPDT-G   78 (308)
T ss_pred             CceEEEEeCCCe-EEEEEecCCCCCCCeEEEEEEEEeeccCchhHHhcCCCCCCCCCCCCccCcceeEEEEEEecCCC-C
Confidence            578999988776 99999999999999999999999996 7999988776533   2569999999999999999998 6


Q ss_pred             CCCCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhc
Q 018529           86 LEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVA  165 (354)
Q Consensus        86 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~  165 (354)
                      |++||||+..    |..|..|..          ...|+|+||+.+|++.++++|+.++++. +.+. ..++||+++.+ .
T Consensus        79 ~~vGdrV~~~----~~~c~~~~~----------~~~G~~aey~~v~~~~~~~ip~~~~~~~-a~~~-~~~~a~~~~~~-~  141 (308)
T TIGR01202        79 FRPGDRVFVP----GSNCYEDVR----------GLFGGASKRLVTPASRVCRLDPALGPQG-ALLA-LAATARHAVAG-A  141 (308)
T ss_pred             CCCCCEEEEe----Ccccccccc----------ccCCcccceEEcCHHHceeCCCCCCHHH-Hhhh-HHHHHHHHHHh-c
Confidence            9999999873    233444321          1248999999999999999999998754 4444 57899998644 3


Q ss_pred             CCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEE
Q 018529          166 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVE  245 (354)
Q Consensus       166 ~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d  245 (354)
                       ..++++++|+|+|++|++++|+|+++|++.|++++.+++|++.+.++   .++++.+.           ..+++|+|||
T Consensus       142 -~~~~~~vlV~G~G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~~~---~~i~~~~~-----------~~~g~Dvvid  206 (308)
T TIGR01202       142 -EVKVLPDLIVGHGTLGRLLARLTKAAGGSPPAVWETNPRRRDGATGY---EVLDPEKD-----------PRRDYRAIYD  206 (308)
T ss_pred             -ccCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhhhc---cccChhhc-----------cCCCCCEEEE
Confidence             34689999999999999999999999996677888888777766543   33443211           1237999999


Q ss_pred             cccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhhccccEEEEEeccCCCCCCCHHHHHHHHHccCCCCCCcee
Q 018529          246 CTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFIT  325 (354)
Q Consensus       246 ~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  325 (354)
                      |+|++..++.++++++++ |+++++|.......+++.. .+.+++++.++....   +++++++++++.++++++.++++
T Consensus       207 ~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~-~~~~~~~i~~~~~~~---~~~~~~~~~l~~~g~i~~~~~it  281 (308)
T TIGR01202       207 ASGDPSLIDTLVRRLAKG-GEIVLAGFYTEPVNFDFVP-AFMKEARLRIAAEWQ---PGDLHAVRELIESGALSLDGLIT  281 (308)
T ss_pred             CCCCHHHHHHHHHhhhcC-cEEEEEeecCCCcccccch-hhhcceEEEEecccc---hhHHHHHHHHHHcCCCChhhccc
Confidence            999977889999999997 9999999764322222222 244788888865432   35799999999999999988899


Q ss_pred             eeeccccHHHHHHHHhcCC-ceeEEEe
Q 018529          326 HRIPFSEINKAFEYMVKGE-GLRCIIS  351 (354)
Q Consensus       326 ~~~~l~~~~~a~~~~~~~~-~~k~vi~  351 (354)
                      ++|||+|+++||+.+.+++ .+|++|+
T Consensus       282 ~~~~l~~~~~A~~~~~~~~~~~Kv~~~  308 (308)
T TIGR01202       282 HQRPASDAAEAYMTAFSDPDCLKMILD  308 (308)
T ss_pred             eeecHHHHHHHHHHHhcCcCceEEEeC
Confidence            9999999999999876654 4788874

>PRK10083 putative oxidoreductase; Provisional

Probab=100.00  E-value=3.4e-44  Score=326.51  Aligned_cols=330  Identities=22%  Similarity=0.349  Sum_probs=271.3

Q ss_pred             cceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 018529           11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD   90 (354)
Q Consensus        11 ~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd   90 (354)
                      |||+++.+++. +++.+++.|+|+++|++||+.++++|++|+..+.+..+..++|.++|||++|+|+++|++++.+++||
T Consensus         1 m~a~~~~~~~~-~~~~~~~~p~~~~~~vlV~v~~~gi~~~d~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd   79 (339)
T PRK10083          1 MKSIVIEKPNS-LAIEERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHNPFAKYPRVIGHEFFGVIDAVGEGVDAARIGE   79 (339)
T ss_pred             CeEEEEecCCe-eEEEeccCCCCCCCeEEEEEEEEEEcccchHHHcCCCCcCCCCcccccceEEEEEEECCCCccCCCCC
Confidence            68999988875 99999999999999999999999999999998877655455689999999999999999999999999


Q ss_pred             EEEecccCCCCCCcccccCCCC-CCcc---cccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhcC
Q 018529           91 HVLPVFTGECGDCRHCRFSING-EPVN---HFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK  166 (354)
Q Consensus        91 ~V~~~~~~~~~~c~~c~~~~~~-~~~~---~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~~  166 (354)
                      +|++.+..+|+.|.+|+.+... |...   .....|+|+||+.++.+.++++|+++++++++ +..++.++|.+ ....+
T Consensus        80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~a~-~~~~~~~a~~~-~~~~~  157 (339)
T PRK10083         80 RVAVDPVISCGHCYPCSIGKPNVCTSLVVLGVHRDGGFSEYAVVPAKNAHRIPDAIADQYAV-MVEPFTIAANV-TGRTG  157 (339)
T ss_pred             EEEEccccCCCCCccccCcCcccCCCCceEEEccCCcceeeEEechHHeEECcCCCCHHHHh-hhchHHHHHHH-HHhcC
Confidence            9999999999999999765432 2111   12225899999999999999999999998876 55678888864 67789


Q ss_pred             CCCCCeEEEEcCChhHHHHHHHHHH-cCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC-CccEEE
Q 018529          167 PERGSSVAVFGLGAVGLAAAEGARI-AGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSV  244 (354)
Q Consensus       167 ~~~~~~vlI~G~g~~G~~a~~~a~~-~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~~dvv~  244 (354)
                      +++|++|+|+|+|++|++++|+|+. +|+..++++++++++.++++++|++.++++.+.+  +.+.+...  + ++|++|
T Consensus       158 ~~~g~~vlI~g~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~~~--~~~~~~~~--g~~~d~vi  233 (339)
T PRK10083        158 PTEQDVALIYGAGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINNAQEP--LGEALEEK--GIKPTLII  233 (339)
T ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHhCCcEEecCcccc--HHHHHhcC--CCCCCEEE
Confidence            9999999999999999999999996 6997788899999999999999999999877644  65555432  3 578999


Q ss_pred             EcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhh-hccccEEEEEeccCCCCCCCHHHHHHHHHccCCCCCCc
Q 018529          245 ECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKF  323 (354)
Q Consensus       245 d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  323 (354)
                      |++|++..+..++++++++ |+++.+|......  .+.... ..+++++.+...    ..+.++++++++.++++.+...
T Consensus       234 d~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~--~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~g~l~~~~~  306 (339)
T PRK10083        234 DAACHPSILEEAVTLASPA-ARIVLMGFSSEPS--EIVQQGITGKELSIFSSRL----NANKFPVVIDWLSKGLIDPEKL  306 (339)
T ss_pred             ECCCCHHHHHHHHHHhhcC-CEEEEEccCCCCc--eecHHHHhhcceEEEEEec----ChhhHHHHHHHHHcCCCChHHh
Confidence            9999877899999999997 9999998764322  222222 236777776543    2357899999999998887655


Q ss_pred             eeeeeccccHHHHHHHHhcCC--ceeEEEecCC
Q 018529          324 ITHRIPFSEINKAFEYMVKGE--GLRCIISMED  354 (354)
Q Consensus       324 v~~~~~l~~~~~a~~~~~~~~--~~k~vi~~~d  354 (354)
                      +.+.|+++++++|++.+.+++  .+|+++++.+
T Consensus       307 ~~~~~~l~~~~~a~~~~~~~~~~~~kvvv~~~~  339 (339)
T PRK10083        307 ITHTFDFQHVADAIELFEKDQRHCCKVLLTFAE  339 (339)
T ss_pred             eeeeecHHHHHHHHHHHhcCCCceEEEEEecCC
Confidence            789999999999999987643  3799998754

>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=2.4e-44  Score=326.44  Aligned_cols=326  Identities=25%  Similarity=0.434  Sum_probs=272.0

Q ss_pred             cceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 018529           11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD   90 (354)
Q Consensus        11 ~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd   90 (354)
                      |||+++.+++.++++++.+.|+++++||+||+.++++|++|+..+.|..+...+|.++|||++|+|+++|++++++++||
T Consensus         1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd   80 (333)
T cd08296           1 YKAVQVTEPGGPLELVERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAMPGLSYPRVPGHEVVGRIDAVGEGVSRWKVGD   80 (333)
T ss_pred             CeEEEEccCCCCceEEeccCCCCCCCEEEEEEEEEecchHHHHHHhCCCCCCCCCcccCcceeEEEEEECCCCccCCCCC
Confidence            79999999966699999999999999999999999999999998877554445688999999999999999999999999


Q ss_pred             EEEecc-cCCCCCCcccccCCCC-CCccc---ccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhc
Q 018529           91 HVLPVF-TGECGDCRHCRFSING-EPVNH---FLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVA  165 (354)
Q Consensus        91 ~V~~~~-~~~~~~c~~c~~~~~~-~~~~~---~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~  165 (354)
                      +|++.+ ...|++|.+|..+... |....   ....|+|++|+.++++.++++|+++++.+++.+++++.+||+++. ..
T Consensus        81 ~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~~-~~  159 (333)
T cd08296          81 RVGVGWHGGHCGTCDACRRGDFVHCENGKVTGVTRDGGYAEYMLAPAEALARIPDDLDAAEAAPLLCAGVTTFNALR-NS  159 (333)
T ss_pred             EEEeccccCCCCCChhhhCcCcccCCCCCccCcccCCcceeEEEEchhheEeCCCCCCHHHhhhhhhhhHHHHHHHH-hc
Confidence            998744 5679999999766543 22221   222589999999999999999999999999999999999999874 45


Q ss_pred             CCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEE
Q 018529          166 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVE  245 (354)
Q Consensus       166 ~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d  245 (354)
                      .++++++|||+|+|++|++++++|+.+|+ +|+++++++++.++++++|+++++++.+.+  +.+.+++.  +++|+++|
T Consensus       160 ~~~~~~~vlV~g~g~iG~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~--~~~~~~~~--~~~d~vi~  234 (333)
T cd08296         160 GAKPGDLVAVQGIGGLGHLAVQYAAKMGF-RTVAISRGSDKADLARKLGAHHYIDTSKED--VAEALQEL--GGAKLILA  234 (333)
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHcCCcEEecCCCcc--HHHHHHhc--CCCCEEEE
Confidence            89999999999999999999999999999 799999999999999999999998877654  66666665  37999999


Q ss_pred             cccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhh-hccccEEEEEeccCCCCCCCHHHHHHHHHccCCCCCCce
Q 018529          246 CTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFI  324 (354)
Q Consensus       246 ~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  324 (354)
                      +.|....+..++++++++ |+++.+|....  ..++.... +.+++++.++..+.   ..++..+++++..+++..  .+
T Consensus       235 ~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~i~~~~~~~---~~~~~~~~~~~~~~~l~~--~v  306 (333)
T cd08296         235 TAPNAKAISALVGGLAPR-GKLLILGAAGE--PVAVSPLQLIMGRKSIHGWPSGT---ALDSEDTLKFSALHGVRP--MV  306 (333)
T ss_pred             CCCchHHHHHHHHHcccC-CEEEEEecCCC--CCCcCHHHHhhcccEEEEeCcCC---HHHHHHHHHHHHhCCCCc--eE
Confidence            998668899999999997 99999987652  22333332 34899999876432   246888888888876543  34


Q ss_pred             eeeeccccHHHHHHHHhcCCc-eeEEEe
Q 018529          325 THRIPFSEINKAFEYMVKGEG-LRCIIS  351 (354)
Q Consensus       325 ~~~~~l~~~~~a~~~~~~~~~-~k~vi~  351 (354)
                       +.|+++|+.+|++.+.+++. +|+|++
T Consensus       307 -~~~~~~~~~~a~~~~~~~~~~gk~v~~  333 (333)
T cd08296         307 -ETFPLEKANEAYDRMMSGKARFRVVLT  333 (333)
T ss_pred             -EEEEHHHHHHHHHHHHCCCCceeEEeC
Confidence             68999999999999998886 688774

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal

>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1

Probab=100.00  E-value=2.6e-44  Score=331.95  Aligned_cols=333  Identities=29%  Similarity=0.430  Sum_probs=276.7

Q ss_pred             cceeeeccCCCceEEEEeecCCC-CCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 018529           11 CKAAVAWEAGKPLIIQDVEVAPP-QAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG   89 (354)
Q Consensus        11 ~~a~~~~~~~~~l~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~G   89 (354)
                      |||+++.+++. +++.+++.|.| ++++|+||+.++++|++|+..+.|..+..++|.++|||++|+|+++|++++++++|
T Consensus         1 m~a~~~~~~~~-~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G   79 (386)
T cd08283           1 MKALVWHGKGD-VRVEEVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPGMKKGDILGHEFMGVVEEVGPEVRNLKVG   79 (386)
T ss_pred             CeeEEEecCCC-ceEEeCCCCCCCCCCeEEEEEEEEecchhhhhhhcCCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Confidence            78999988765 99999999988 49999999999999999999998876555668899999999999999999999999


Q ss_pred             CEEEecccCCCCCCcccccCCCCCCccc----------------cc--------ccccceeeEEeecc--ceEECCCCCC
Q 018529           90 DHVLPVFTGECGDCRHCRFSINGEPVNH----------------FL--------GTSTFSEYTVVHSG--CVAKINPLAP  143 (354)
Q Consensus        90 d~V~~~~~~~~~~c~~c~~~~~~~~~~~----------------~~--------~~g~~a~~~~v~~~--~~~~~P~~~~  143 (354)
                      |+|++.+..+|++|++|..+....+...                ..        ..|+|++|+.++++  .++++|++++
T Consensus        80 d~V~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~~~~  159 (386)
T cd08283          80 DRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAGIFGYSHLTGGYAGGQAEYVRVPFADVGPFKIPDDLS  159 (386)
T ss_pred             CEEEEcCcCCCCCChhhcCCCcccCCCcccccccccccccccccccccccccCCCCCeeEEEEEcccccCeEEECCCCCC
Confidence            9999999999999999976653322111                11        24899999999988  8999999999


Q ss_pred             ccchhhcccchhhhhhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCC
Q 018529          144 LDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE  223 (354)
Q Consensus       144 ~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~  223 (354)
                      +++|+++++.+++||+++ ...+++++++|||+|+|++|.+++++|+..|..+|+++++++++.+++++++...++++.+
T Consensus       160 ~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~g~G~vG~~~~~la~~~g~~~vi~~~~~~~~~~~~~~~~~~~vi~~~~  238 (386)
T cd08283         160 DEKALFLSDILPTGYHAA-ELAEVKPGDTVAVWGCGPVGLFAARSAKLLGAERVIAIDRVPERLEMARSHLGAETINFEE  238 (386)
T ss_pred             HHHHhhhccchhhhHHHH-hhccCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCcEEEcCCc
Confidence            999999999999999997 7889999999999988999999999999999856999999999999999984446676655


Q ss_pred             CChhHHHHHHHHcCC-CccEEEEcccC---------------------hHhHHHHHHHhhCCCceEEEEcCCCCCceeec
Q 018529          224 HDRPIQEVIAEMTNG-GVDRSVECTGN---------------------IDNMISAFECVHDGWGVAVLVGVPSKDAVFMT  281 (354)
Q Consensus       224 ~~~~~~~~i~~~~~~-~~dvv~d~~g~---------------------~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~  281 (354)
                      .+ ++.+.+.+++++ ++|++||++|+                     ...++.++++++++ |+++.+|..... ...+
T Consensus       239 ~~-~~~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-G~iv~~g~~~~~-~~~~  315 (386)
T cd08283         239 VD-DVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKG-GTVSIIGVYGGT-VNKF  315 (386)
T ss_pred             ch-HHHHHHHHHcCCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccC-CEEEEEcCCCCC-cCcc
Confidence            32 377778888877 89999999975                     24678899999997 999999876432 2223


Q ss_pred             ch-hhhccccEEEEEeccCCCCCCCHHHHHHHHHccCCCCCCceeeeeccccHHHHHHHHhcCC-c-eeEEEe
Q 018529          282 KP-INVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGE-G-LRCIIS  351 (354)
Q Consensus       282 ~~-~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~-~-~k~vi~  351 (354)
                      .. ..+.+++++.+...   ...+.++++++++.++++.+.+++.+.|+++++.+|++.+.+++ . +|+||+
T Consensus       316 ~~~~~~~~~~~i~~~~~---~~~~~~~~~~~~l~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~  385 (386)
T cd08283         316 PIGAAMNKGLTLRMGQT---HVQRYLPRLLELIESGELDPSFIITHRLPLEDAPEAYKIFDKKEDGCIKVVLK  385 (386)
T ss_pred             CHHHHHhCCcEEEeccC---CchHHHHHHHHHHHcCCCChhHceEEEecHHHHHHHHHHHHhCCCCeEEEEec
Confidence            33 22447888887642   22356889999999998887666778999999999999998876 3 688885

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T

>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=6.8e-44  Score=325.75  Aligned_cols=330  Identities=25%  Similarity=0.388  Sum_probs=273.0

Q ss_pred             cceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCC---------CCCCcccccceeEEEEEeCC
Q 018529           11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT---------PLFPRIFGHEAAGVVESVGE   81 (354)
Q Consensus        11 ~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~---------~~~p~~~G~e~~G~V~~vG~   81 (354)
                      |||++++++++ +++++.+.|++.+++|+||+.++++|++|+..+.|....         ..+|.++|||++|+|+++|+
T Consensus         1 mka~~~~~~~~-~~~~~~~~p~~~~~~v~V~v~a~~i~~~d~~~~~g~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~   79 (350)
T cd08256           1 MRAVVCHGPQD-YRLEEVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGRVVELGE   79 (350)
T ss_pred             CeeEEEecCCc-eEEEECCCCCCCCCeEEEEEEEEEEcccchhhhcCCCccccccccCccCCCCcccCcceeEEEEEeCC
Confidence            78999998876 999999999999999999999999999999988764311         14577899999999999999


Q ss_pred             CCC--CCCCCCEEEecccCCCCCCcccccCCCC-CCcc---cc--cccccceeeEEeecc-ceEECCCCCCccchhhccc
Q 018529           82 GVS--DLEVGDHVLPVFTGECGDCRHCRFSING-EPVN---HF--LGTSTFSEYTVVHSG-CVAKINPLAPLDKVCILSC  152 (354)
Q Consensus        82 ~~~--~~~~Gd~V~~~~~~~~~~c~~c~~~~~~-~~~~---~~--~~~g~~a~~~~v~~~-~~~~~P~~~~~~~aa~l~~  152 (354)
                      +++  +|++||+|++.+..+|++|++|..+... |...   +.  ...|+|++|+.++++ .++++|+++++++++.+ .
T Consensus        80 ~v~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~lP~~~~~~~aa~~-~  158 (350)
T cd08256          80 GAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDLYGFQNNVNGGMAEYMRFPKEAIVHKVPDDIPPEDAILI-E  158 (350)
T ss_pred             CcccCCCCCCCEEEECCcCCCCCChHHhCcCcccCcCccceeeccCCCCcceeeEEcccccceEECCCCCCHHHHhhh-h
Confidence            999  8999999999999999999999766432 2111   11  135899999999988 67899999999999988 7


Q ss_pred             chhhhhhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHH
Q 018529          153 GVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVI  232 (354)
Q Consensus       153 ~~~~a~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i  232 (354)
                      +++++|+++ +.++++++++|+|.|+|.+|++++++|+++|+..++++++++++.++++++|++.+++..+.+  +.+.+
T Consensus       159 ~~~ta~~a~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~--~~~~~  235 (350)
T cd08256         159 PLACALHAV-DRANIKFDDVVVLAGAGPLGLGMIGAARLKNPKKLIVLDLKDERLALARKFGADVVLNPPEVD--VVEKI  235 (350)
T ss_pred             HHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHHHHcCCcEEecCCCcC--HHHHH
Confidence            999999986 778999999999977899999999999999987788999999999999999998888876554  77788


Q ss_pred             HHHcCC-CccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhhccccEEEEEeccCCCCCCCHHHHHH
Q 018529          233 AEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVD  311 (354)
Q Consensus       233 ~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~  311 (354)
                      .+++++ ++|++||++|+...+..++++++++ |+++.+|.........+......+++++.++....    ..+.++++
T Consensus       236 ~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~----~~~~~~~~  310 (350)
T cd08256         236 KELTGGYGCDIYIEATGHPSAVEQGLNMIRKL-GRFVEFSVFGDPVTVDWSIIGDRKELDVLGSHLGP----YCYPIAID  310 (350)
T ss_pred             HHHhCCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEccCCCCCccChhHhhcccccEEEEeccCc----hhHHHHHH
Confidence            888777 8999999999767888999999997 99999986543222222222124677787766433    36888999


Q ss_pred             HHHccCCCCCCceeeeeccccHHHHHHHHhcCCc-eeEEE
Q 018529          312 MYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCII  350 (354)
Q Consensus       312 ~~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi  350 (354)
                      ++.++.+.+.+.+.+.|+++++.+|++.+.+++. +|+|+
T Consensus       311 ~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~kvv~  350 (350)
T cd08256         311 LIASGRLPTDGIVTHQFPLEDFEEAFELMARGDDSIKVVL  350 (350)
T ss_pred             HHHcCCCChhHheEEEeEHHHHHHHHHHHHhCCCceEEeC
Confidence            9999988775556899999999999999988775 57664

This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,

>cd05278 FDH_like Formaldehyde dehydrogenases

Probab=100.00  E-value=5.8e-44  Score=326.07  Aligned_cols=333  Identities=32%  Similarity=0.434  Sum_probs=277.2

Q ss_pred             cceeeeccCCCceEEEEeecCCC-CCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 018529           11 CKAAVAWEAGKPLIIQDVEVAPP-QAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG   89 (354)
Q Consensus        11 ~~a~~~~~~~~~l~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~G   89 (354)
                      |||+++.+++. +++.+.|.|.| .++||+||+.++++|++|+....+..+...+|.++|+|++|+|+++|++++++++|
T Consensus         1 ~ka~~~~~~~~-~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~G   79 (347)
T cd05278           1 MKALVYLGPGK-IGLEEVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGVPGAKHGMILGHEFVGEVVEVGSDVKRLKPG   79 (347)
T ss_pred             CceEEEecCCc-eEEEEcCCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCCCCCCceeccceEEEEEEECCCccccCCC
Confidence            68999988876 89999999999 89999999999999999999888766556668999999999999999999999999


Q ss_pred             CEEEecccCCCCCCcccccCCCC-CCc------ccccccccceeeEEeecc--ceEECCCCCCccchhhcccchhhhhhh
Q 018529           90 DHVLPVFTGECGDCRHCRFSING-EPV------NHFLGTSTFSEYTVVHSG--CVAKINPLAPLDKVCILSCGVSTGLGA  160 (354)
Q Consensus        90 d~V~~~~~~~~~~c~~c~~~~~~-~~~------~~~~~~g~~a~~~~v~~~--~~~~~P~~~~~~~aa~l~~~~~~a~~~  160 (354)
                      |+|++.+..+|+.|.+|..+... ++.      .+....|+|++|++++++  .++++|+++++++++.+++++.+||++
T Consensus        80 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~~  159 (347)
T cd05278          80 DRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGNRIDGGQAEYVRVPYADMNLAKIPDGLPDEDALMLSDILPTGFHG  159 (347)
T ss_pred             CEEEecCCCCCCCChhHhCcCcccCcCCCcccccccCCCCeeeEEEEecchhCeEEECCCCCCHHHHhhhcchhhheeeh
Confidence            99999999999999999765432 111      111345899999999998  999999999999999999999999999


Q ss_pred             hhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC-C
Q 018529          161 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-G  239 (354)
Q Consensus       161 l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~  239 (354)
                      + ...+++++++|||.|+|.+|++++|+|+.+|..+|+++++++++.++++++|++.++++.+.+  +.+.+++++++ +
T Consensus       160 ~-~~~~~~~~~~VlI~g~g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~--~~~~i~~~~~~~~  236 (347)
T cd05278         160 A-ELAGIKPGSTVAVIGAGPVGLCAVAGARLLGAARIIAVDSNPERLDLAKEAGATDIINPKNGD--IVEQILELTGGRG  236 (347)
T ss_pred             h-hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhCCcEEEcCCcch--HHHHHHHHcCCCC
Confidence            6 778899999999988899999999999999965788888899999999999999998887654  77788887775 8


Q ss_pred             ccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhhccccEEEEEeccCCCCCCCHHHHHHHHHccCCC
Q 018529          240 VDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLE  319 (354)
Q Consensus       240 ~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~  319 (354)
                      +|++||++|+...+..++++|+++ |+++.+|..............+.+++++.++....   .+.++++++++.++.+.
T Consensus       237 ~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~  312 (347)
T cd05278         237 VDCVIEAVGFEETFEQAVKVVRPG-GTIANVGVYGKPDPLPLLGEWFGKNLTFKTGLVPV---RARMPELLDLIEEGKID  312 (347)
T ss_pred             CcEEEEccCCHHHHHHHHHHhhcC-CEEEEEcCCCCCcccCccchhhhceeEEEeeccCc---hhHHHHHHHHHHcCCCC
Confidence            999999998867889999999997 99999986542211112222234677777654322   35788999999999887


Q ss_pred             CCCceeeeeccccHHHHHHHHhcCCc--eeEEEe
Q 018529          320 LEKFITHRIPFSEINKAFEYMVKGEG--LRCIIS  351 (354)
Q Consensus       320 ~~~~v~~~~~l~~~~~a~~~~~~~~~--~k~vi~  351 (354)
                      +.+.+...|+++++++|++.+..++.  .|+|++
T Consensus       313 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~vv~  346 (347)
T cd05278         313 PSKLITHRFPLDDILKAYRLFDNKPDGCIKVVIR  346 (347)
T ss_pred             hhHcEEEEecHHHHHHHHHHHhcCCCCceEEEec
Confidence            65556788999999999999887765  578775

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=100.00  E-value=5.7e-44  Score=322.88  Aligned_cols=309  Identities=19%  Similarity=0.261  Sum_probs=253.4

Q ss_pred             cceeeeccCCC-----ceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCC-CCCCcccccceeEEEEEeCCCCC
Q 018529           11 CKAAVAWEAGK-----PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVS   84 (354)
Q Consensus        11 ~~a~~~~~~~~-----~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~~~   84 (354)
                      |||+++.+++.     .+++.+.|.|.|+++||+||+.++++|++|+....|..+. ..+|.++|||++|+|+++|++++
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~gi~~~d~~~~~g~~~~~~~~p~v~G~e~~G~V~~vG~~v~   80 (324)
T cd08291           1 MKALLLEEYGKPLEVKELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGSTKALPVPPGFEGSGTVVAAGGGPL   80 (324)
T ss_pred             CeEEEEeecCCCccccEEEecccCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCcCCCcceEEEEEEECCCcc
Confidence            78999998875     3788899999999999999999999999999988775543 35688999999999999999999


Q ss_pred             C-CCCCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhh
Q 018529           85 D-LEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLN  163 (354)
Q Consensus        85 ~-~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~  163 (354)
                      + |++||+|++.+.                      ..|+|+||+.+|++.++++|+++++++++++++.+.|||.. ..
T Consensus        81 ~~~~vGd~V~~~~~----------------------~~g~~a~~~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~-~~  137 (324)
T cd08291          81 AQSLIGKRVAFLAG----------------------SYGTYAEYAVADAQQCLPLPDGVSFEQGASSFVNPLTALGM-LE  137 (324)
T ss_pred             ccCCCCCEEEecCC----------------------CCCcchheeeecHHHeEECCCCCCHHHHhhhcccHHHHHHH-HH
Confidence            6 999999986521                      13899999999999999999999999999888889999754 45


Q ss_pred             hcCCCCCCeEEEE-c-CChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC-Cc
Q 018529          164 VAKPERGSSVAVF-G-LGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GV  240 (354)
Q Consensus       164 ~~~~~~~~~vlI~-G-~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~~  240 (354)
                      .... +++.++|+ | +|++|++++|+|+.+|+ +|+++++++++.++++++|+++++++.+.+  +.+.+++++.+ ++
T Consensus       138 ~~~~-~~~~vlv~~~g~g~vG~~a~q~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~--~~~~v~~~~~~~~~  213 (324)
T cd08291         138 TARE-EGAKAVVHTAAASALGRMLVRLCKADGI-KVINIVRRKEQVDLLKKIGAEYVLNSSDPD--FLEDLKELIAKLNA  213 (324)
T ss_pred             hhcc-CCCcEEEEccCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEECCCcc--HHHHHHHHhCCCCC
Confidence            5555 56667665 4 59999999999999999 899999999999999999999999887655  88888888876 89


Q ss_pred             cEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchh-hhccccEEEEEeccCCCC---CCCHHHHHHHHHcc
Q 018529          241 DRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI-NVLNERTLKGTFFGNYKP---RTDLPSVVDMYMNK  316 (354)
Q Consensus       241 dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~-~~~~~~~i~g~~~~~~~~---~~~~~~~~~~~~~~  316 (354)
                      |++||++|+ ......+++++++ |+++.+|.........+... .+.+++++.+++...+..   .++++++++++. +
T Consensus       214 d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  290 (324)
T cd08291         214 TIFFDAVGG-GLTGQILLAMPYG-STLYVYGYLSGKLDEPIDPVDLIFKNKSIEGFWLTTWLQKLGPEVVKKLKKLVK-T  290 (324)
T ss_pred             cEEEECCCc-HHHHHHHHhhCCC-CEEEEEEecCCCCcccCCHHHHhhcCcEEEEEEHHHhhcccCHHHHHHHHHHHh-C
Confidence            999999998 5667789999997 99999986543221112222 245889999988655432   235777888877 6


Q ss_pred             CCCCCCceeeeeccccHHHHHHHHhcCCc-eeEEEe
Q 018529          317 QLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIIS  351 (354)
Q Consensus       317 ~~~~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~  351 (354)
                      .  +.+.++++|+|+|+.+||+.+.+++. +|++|.
T Consensus       291 ~--~~~~i~~~~~l~~~~~a~~~~~~~~~~Gkvv~~  324 (324)
T cd08291         291 E--LKTTFASRYPLALTLEAIAFYSKNMSTGKKLLI  324 (324)
T ss_pred             c--cccceeeEEcHHHHHHHHHHHHhCCCCCeEEeC
Confidence            4  45568899999999999999988765 788763

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=2e-43  Score=324.61  Aligned_cols=335  Identities=33%  Similarity=0.501  Sum_probs=279.3

Q ss_pred             cceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCC---CC
Q 018529           11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSD---LE   87 (354)
Q Consensus        11 ~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~---~~   87 (354)
                      |||+++.+++.++++.+.++|.++++||+|++.++++|++|+....+..+. .+|.++|||++|+|+.+|+++++   |+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~-~~p~~~g~e~~G~v~~vG~~~~~~~~~~   79 (367)
T cd08263           1 MKAAVLKGPNPPLTIEEIPVPRPKEGEILIRVAACGVCHSDLHVLKGELPF-PPPFVLGHEISGEVVEVGPNVENPYGLS   79 (367)
T ss_pred             CeeEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEeeeCcchHHHhcCCCCC-CCCcccccccceEEEEeCCCCCCCCcCC
Confidence            789999988777999999999999999999999999999999988775543 56789999999999999999988   99


Q ss_pred             CCCEEEecccCCCCCCcccccCCCCCCccc--------------------------ccccccceeeEEeeccceEECCCC
Q 018529           88 VGDHVLPVFTGECGDCRHCRFSINGEPVNH--------------------------FLGTSTFSEYTVVHSGCVAKINPL  141 (354)
Q Consensus        88 ~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~--------------------------~~~~g~~a~~~~v~~~~~~~~P~~  141 (354)
                      +||+|++.+..+|+.|.+|..+....+...                          ....|+|++|+.++++.++++|++
T Consensus        80 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~  159 (367)
T cd08263          80 VGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVYMYSMGGLAEYAVVPATALAPLPES  159 (367)
T ss_pred             CCCEEEEcCCCCCCCChHHhCcCcccCcCccccccccccccCCcccccccCCCccccccCCcceeEEEechhhEEECCCC
Confidence            999999999999999999964432211110                          023589999999999999999999


Q ss_pred             CCccchhhcccchhhhhhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcC
Q 018529          142 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT  221 (354)
Q Consensus       142 ~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~  221 (354)
                      +++.+++.+++++++||+++.+...+.++++|||+|+|++|++++++|+.+|+++|+++++++++.+.++++|++.+++.
T Consensus       160 is~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g~g~vG~~~~~lak~~G~~~vi~~~~s~~~~~~~~~~g~~~v~~~  239 (367)
T cd08263         160 LDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIGVGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAKELGATHTVNA  239 (367)
T ss_pred             CCHHHHhHhcchHHHHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCceEecC
Confidence            99999999999999999998777888999999999889999999999999999559999899999999999999999888


Q ss_pred             CCCChhHHHHHHHHcCC-CccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhh-ccccEEEEEeccC
Q 018529          222 SEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFFGN  299 (354)
Q Consensus       222 ~~~~~~~~~~i~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~  299 (354)
                      .+.+  +.+++++...+ ++|++||++++......++++++++ |+++.++.........+....+ .+++++.++... 
T Consensus       240 ~~~~--~~~~l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  315 (367)
T cd08263         240 AKED--AVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDG-GRAVVVGLAPGGATAEIPITRLVRRGIKIIGSYGA-  315 (367)
T ss_pred             Cccc--HHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcC-CEEEEEccCCCCCccccCHHHHhhCCeEEEecCCC-
Confidence            7654  77778877765 8999999999854889999999997 9999998654322223333334 477787774321 


Q ss_pred             CCCCCCHHHHHHHHHccCCCCCCceeeeeccccHHHHHHHHhcCCc-eeEEEe
Q 018529          300 YKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIIS  351 (354)
Q Consensus       300 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~  351 (354)
                       ..++.++.+++++.++++.+...+++.++++++.++++.+.+++. +|+|+.
T Consensus       316 -~~~~~~~~~~~ll~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~~~~  367 (367)
T cd08263         316 -RPRQDLPELVGLAASGKLDPEALVTHKYKLEEINEAYENLRKGLIHGRAIVE  367 (367)
T ss_pred             -CcHHHHHHHHHHHHcCCCCcccceeEEecHHHHHHHHHHHhcCCccceeeeC
Confidence             223468889999999988776567789999999999999988875 588763

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu

>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like

Probab=100.00  E-value=2.7e-43  Score=321.33  Aligned_cols=332  Identities=31%  Similarity=0.420  Sum_probs=277.4

Q ss_pred             cceeeeccCCCceEEEEeecCCC-CCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 018529           11 CKAAVAWEAGKPLIIQDVEVAPP-QAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG   89 (354)
Q Consensus        11 ~~a~~~~~~~~~l~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~G   89 (354)
                      |||+++.+++. +++.+.+.|+| .++||+||+.++++|+.|+..+.|..+...+|.++|||++|+|+++|++++++++|
T Consensus         1 m~a~~~~~~~~-~~~~~~~~p~~~~~~ev~v~v~a~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~G   79 (345)
T cd08286           1 MKALVYHGPGK-ISWEDRPKPTIQEPTDAIVKMLKTTICGTDLHILKGDVPTVTPGRILGHEGVGVVEEVGSAVTNFKVG   79 (345)
T ss_pred             CceEEEecCCc-eeEEecCCCCCCCCCeEEEEEEEeeecchhhHHHcCCCCCCCCCceecccceEEEEEeccCccccCCC
Confidence            68999988886 99999999986 89999999999999999999988765545558899999999999999999999999


Q ss_pred             CEEEecccCCCCCCcccccCCCCCCc-----ccccccccceeeEEeecc--ceEECCCCCCccchhhcccchhhhhhhhh
Q 018529           90 DHVLPVFTGECGDCRHCRFSINGEPV-----NHFLGTSTFSEYTVVHSG--CVAKINPLAPLDKVCILSCGVSTGLGATL  162 (354)
Q Consensus        90 d~V~~~~~~~~~~c~~c~~~~~~~~~-----~~~~~~g~~a~~~~v~~~--~~~~~P~~~~~~~aa~l~~~~~~a~~~l~  162 (354)
                      |+|++.+..+|++|++|..+......     .+....|+|++|+.++++  .++++|++++..+++.+++++++||+++.
T Consensus        80 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~~  159 (345)
T cd08286          80 DRVLISCISSCGTCGYCRKGLYSHCESGGWILGNLIDGTQAEYVRIPHADNSLYKLPEGVDEEAAVMLSDILPTGYECGV  159 (345)
T ss_pred             CEEEECCcCCCCCChHHHCcCcccCCCcccccccccCCeeeeEEEcccccCceEECCCCCCHHHhhhccchhHHHHHHHH
Confidence            99999999999999999754322111     112234899999999988  89999999999999999999999999777


Q ss_pred             hhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC-Ccc
Q 018529          163 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVD  241 (354)
Q Consensus       163 ~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~~d  241 (354)
                      ...++.++++|||.|+|++|.+++|+|+.+|..+|+++++++++.++++++|++.++++.+.+  +.+.+.+++.+ ++|
T Consensus       160 ~~~~~~~g~~vlI~g~g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~--~~~~i~~~~~~~~~d  237 (345)
T cd08286         160 LNGKVKPGDTVAIVGAGPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKKLGATHTVNSAKGD--AIEQVLELTDGRGVD  237 (345)
T ss_pred             hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCceecccccc--HHHHHHHHhCCCCCC
Confidence            788899999999998899999999999999943888899999999999999999999887654  77777777766 899


Q ss_pred             EEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhh-hccccEEEEEeccCCCCCCCHHHHHHHHHccCCCC
Q 018529          242 RSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLEL  320 (354)
Q Consensus       242 vv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~  320 (354)
                      ++||++|....+..++++++++ |+++.+|.....  ..+.... +.+++++.+....    .+.+..+++++.++.+.+
T Consensus       238 ~vld~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~  310 (345)
T cd08286         238 VVIEAVGIPATFELCQELVAPG-GHIANVGVHGKP--VDLHLEKLWIKNITITTGLVD----TNTTPMLLKLVSSGKLDP  310 (345)
T ss_pred             EEEECCCCHHHHHHHHHhccCC-cEEEEecccCCC--CCcCHHHHhhcCcEEEeecCc----hhhHHHHHHHHHcCCCCh
Confidence            9999999877889999999998 999999865322  2333333 4478888775432    135788999999998877


Q ss_pred             CCceeeeeccccHHHHHHHHhcCC---ceeEEEec
Q 018529          321 EKFITHRIPFSEINKAFEYMVKGE---GLRCIISM  352 (354)
Q Consensus       321 ~~~v~~~~~l~~~~~a~~~~~~~~---~~k~vi~~  352 (354)
                      .+++.+.|++++++++++.+.+..   ..|+||++
T Consensus       311 ~~~~~~~~~l~~~~~a~~~~~~~~~~~~~k~~~~~  345 (345)
T cd08286         311 SKLVTHRFKLSEIEKAYDTFSAAAKHKALKVIIDF  345 (345)
T ss_pred             HHcEEeEeeHHHHHHHHHHHhccCCCCeeEEEEeC
Confidence            666789999999999999988752   35988864

This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (

>cd05284 arabinose_DH_like D-arabinose dehydrogenase

Probab=100.00  E-value=5.6e-43  Score=318.66  Aligned_cols=328  Identities=28%  Similarity=0.407  Sum_probs=274.8

Q ss_pred             cceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCC---CCCCCcccccceeEEEEEeCCCCCCCC
Q 018529           11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ---TPLFPRIFGHEAAGVVESVGEGVSDLE   87 (354)
Q Consensus        11 ~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~---~~~~p~~~G~e~~G~V~~vG~~~~~~~   87 (354)
                      |||+++.+++.++++.+.+.|++++++++||+.++++|++|+....+..+   ...+|.++|+|++|+|+++|+++.+|+
T Consensus         1 ~ka~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~   80 (340)
T cd05284           1 MKAARLYEYGKPLRLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAGWVEEVGSGVDGLK   80 (340)
T ss_pred             CeeeEeccCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCcccccCCCCeecccceeEEEEEeCCCCCcCc
Confidence            68999998877799999999999999999999999999999998877543   245678999999999999999999999


Q ss_pred             CCCEEEecccCCCCCCcccccCCC-CCCc---ccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhh
Q 018529           88 VGDHVLPVFTGECGDCRHCRFSIN-GEPV---NHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLN  163 (354)
Q Consensus        88 ~Gd~V~~~~~~~~~~c~~c~~~~~-~~~~---~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~  163 (354)
                      +||+|++.+..+|+.|.+|..+.. .+..   .+....|+|++|+.++++.++++|+++++++++.+++.+.+||+++..
T Consensus        81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~P~~ls~~~aa~l~~~~~ta~~~l~~  160 (340)
T cd05284          81 EGDPVVVHPPWGCGTCRYCRRGEENYCENARFPGIGTDGGFAEYLLVPSRRLVKLPRGLDPVEAAPLADAGLTAYHAVKK  160 (340)
T ss_pred             CCCEEEEcCCCCCCCChHHhCcCcccCCCCcccCccCCCcceeeEEecHHHeEECCCCCCHHHhhhhcchHHHHHHHHHH
Confidence            999999999999999999975543 2211   222335899999999999999999999999999999999999999766


Q ss_pred             h-cCCCCCCeEEEEcCChhHHHHHHHHHHcC-CcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC-Cc
Q 018529          164 V-AKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GV  240 (354)
Q Consensus       164 ~-~~~~~~~~vlI~G~g~~G~~a~~~a~~~g-~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~~  240 (354)
                      . ..+.++++|||+|+|.+|++++++|+.+| . +|+++++++++.+.++++|+++++++++.   +.+++++++++ ++
T Consensus       161 ~~~~~~~~~~vlI~g~~~vg~~~~~~a~~~g~~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~~i~~~~~~~~~  236 (340)
T cd05284         161 ALPYLDPGSTVVVIGVGGLGHIAVQILRALTPA-TVIAVDRSEEALKLAERLGADHVLNASDD---VVEEVRELTGGRGA  236 (340)
T ss_pred             hcccCCCCCEEEEEcCcHHHHHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHhCCcEEEcCCcc---HHHHHHHHhCCCCC
Confidence            5 46889999999999889999999999999 6 88889899999999999999888887653   67778888776 89


Q ss_pred             cEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhh-hccccEEEEEeccCCCCCCCHHHHHHHHHccCCC
Q 018529          241 DRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLE  319 (354)
Q Consensus       241 dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~  319 (354)
                      |+++|++|+...+..++++++++ |+++.+|....   ....... +.+++++.++...   .++.+.++++++.++.+.
T Consensus       237 dvvld~~g~~~~~~~~~~~l~~~-g~~i~~g~~~~---~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~g~l~  309 (340)
T cd05284         237 DAVIDFVGSDETLALAAKLLAKG-GRYVIVGYGGH---GRLPTSDLVPTEISVIGSLWG---TRAELVEVVALAESGKVK  309 (340)
T ss_pred             CEEEEcCCCHHHHHHHHHHhhcC-CEEEEEcCCCC---CccCHHHhhhcceEEEEEecc---cHHHHHHHHHHHHhCCCC
Confidence            99999999877899999999997 99999986542   1222222 3478888876532   235688899999999776


Q ss_pred             CCCceeeeeccccHHHHHHHHhcCCc-eeEEEec
Q 018529          320 LEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM  352 (354)
Q Consensus       320 ~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~~  352 (354)
                      +   ..+.|+++++++|++.+.+++. +|+|+.+
T Consensus       310 ~---~~~~~~~~~~~~a~~~~~~~~~~gkvv~~~  340 (340)
T cd05284         310 V---EITKFPLEDANEALDRLREGRVTGRAVLVP  340 (340)
T ss_pred             c---ceEEEeHHHHHHHHHHHHcCCccceEEecC
Confidence            4   3467999999999999988775 5877753

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d

>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase

Probab=100.00  E-value=5.3e-43  Score=319.97  Aligned_cols=332  Identities=27%  Similarity=0.398  Sum_probs=275.2

Q ss_pred             cceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCC------------CCCCCcccccceeEEEEE
Q 018529           11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ------------TPLFPRIFGHEAAGVVES   78 (354)
Q Consensus        11 ~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~------------~~~~p~~~G~e~~G~V~~   78 (354)
                      |||+++..++.++++.+.|.|++.++||+||+.++++|++|+..+.+..+            ...+|.++|||++|+|++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~p~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~   80 (350)
T cd08240           1 MKAAAVVEPGKPLEEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGHEIVGEVVA   80 (350)
T ss_pred             CeeEEeccCCCCceEEecCCCCCCCCeEEEEEEEEecCchhHHHHcCCCCccccccccccccCCCCCcccccceeEEEEe
Confidence            79999998888899999999999999999999999999999998876432            123467899999999999


Q ss_pred             eCCCCCCCCCCCEEEecccCCCCCCcccccCCCCCC-cc---cccccccceeeEEeeccceEECCCCCCccchhhcccch
Q 018529           79 VGEGVSDLEVGDHVLPVFTGECGDCRHCRFSINGEP-VN---HFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGV  154 (354)
Q Consensus        79 vG~~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~-~~---~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~  154 (354)
                      +|++++++++||+|++.+...|++|..|..+....+ ..   +....|+|++|+.++.+.++++|+++++.+++.+.+.+
T Consensus        81 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~s~~~aa~l~~~~  160 (350)
T cd08240          81 VGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRALGIFQDGGYAEYVIVPHSRYLVDPGGLDPALAATLACSG  160 (350)
T ss_pred             eCCCCCCCCCCCEEEECCcCCCCCChHHHCcCcccCCCCCceeeeccCcceeeEEecHHHeeeCCCCCCHHHeehhhchh
Confidence            999999999999999999999999999965432211 11   11245899999999999999999999999999999999


Q ss_pred             hhhhhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHH
Q 018529          155 STGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAE  234 (354)
Q Consensus       155 ~~a~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~  234 (354)
                      .+||+++.....++++++|||+|+|++|++++|+|+.+|+++|+++++++++.+.++++|++.+++..+.+  +.+.+.+
T Consensus       161 ~tA~~~~~~~~~~~~~~~vlI~g~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~  238 (350)
T cd08240         161 LTAYSAVKKLMPLVADEPVVIIGAGGLGLMALALLKALGPANIIVVDIDEAKLEAAKAAGADVVVNGSDPD--AAKRIIK  238 (350)
T ss_pred             hhHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCcEEecCCCcc--HHHHHHH
Confidence            99999977666677899999998899999999999999997788998999999999999998888776544  6666777


Q ss_pred             HcCCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhhccccEEEEEeccCCCCCCCHHHHHHHHH
Q 018529          235 MTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYM  314 (354)
Q Consensus       235 ~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~  314 (354)
                      +..+++|++||++|....+..++++|+++ |+++.+|............. ..++.++.++.....   +++.++++++.
T Consensus       239 ~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~-~~~~~~i~~~~~~~~---~~~~~~~~ll~  313 (350)
T cd08240         239 AAGGGVDAVIDFVNNSATASLAFDILAKG-GKLVLVGLFGGEATLPLPLL-PLRALTIQGSYVGSL---EELRELVALAK  313 (350)
T ss_pred             HhCCCCcEEEECCCCHHHHHHHHHHhhcC-CeEEEECCCCCCCcccHHHH-hhcCcEEEEcccCCH---HHHHHHHHHHH
Confidence            66558999999999778899999999997 99999987653322222222 337888887764332   56888999999


Q ss_pred             ccCCCCCCceeeeeccccHHHHHHHHhcCCc-eeEEEe
Q 018529          315 NKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIIS  351 (354)
Q Consensus       315 ~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~  351 (354)
                      ++.+.+.  ..+.|+++++++|++.+.+++. +|++++
T Consensus       314 ~~~i~~~--~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  349 (350)
T cd08240         314 AGKLKPI--PLTERPLSDVNDALDDLKAGKVVGRAVLK  349 (350)
T ss_pred             cCCCccc--eeeEEcHHHHHHHHHHHHcCCccceEEec
Confidence            9977653  4678999999999999987765 688875

6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy

>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.3e-42  Score=316.86  Aligned_cols=334  Identities=28%  Similarity=0.413  Sum_probs=279.4

Q ss_pred             cceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 018529           11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD   90 (354)
Q Consensus        11 ~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd   90 (354)
                      |||+++.+++.++++++.+.|.+.+++|+||+.++++|++|+....|..+...+|.++|+|++|+|+.+|++++.|++||
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~~G~~~~~~~~Gd   80 (345)
T cd08260           1 MRAAVYEEFGEPLEIREVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDPDVTLPHVPGHEFAGVVVEVGEDVSRWRVGD   80 (345)
T ss_pred             CeeEEEecCCCCcEEEEccCCCCCCCeEEEEEEEeeccHHHHHHhcCCCCCCCCCeeeccceeEEEEEECCCCccCCCCC
Confidence            79999998887899999999999999999999999999999998887655455688999999999999999999999999


Q ss_pred             EEEecccCCCCCCcccccCCCCCCccc----ccccccceeeEEeecc--ceEECCCCCCccchhhcccchhhhhhhhhhh
Q 018529           91 HVLPVFTGECGDCRHCRFSINGEPVNH----FLGTSTFSEYTVVHSG--CVAKINPLAPLDKVCILSCGVSTGLGATLNV  164 (354)
Q Consensus        91 ~V~~~~~~~~~~c~~c~~~~~~~~~~~----~~~~g~~a~~~~v~~~--~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~  164 (354)
                      +|++.+..+|++|.+|..+....+..+    ....|+|++|+.+++.  .++++|+++++++++.+++++.+||+++.+.
T Consensus        81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~  160 (345)
T cd08260          81 RVTVPFVLGCGTCPYCRAGDSNVCEHQVQPGFTHPGSFAEYVAVPRADVNLVRLPDDVDFVTAAGLGCRFATAFRALVHQ  160 (345)
T ss_pred             EEEECCCCCCCCCccccCcCcccCCCCcccccCCCCcceeEEEcccccCceEECCCCCCHHHhhhhccchHHHHHHHHHc
Confidence            999877788999999976553322222    2236899999999985  9999999999999999999999999998778


Q ss_pred             cCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCC-CChhHHHHHHHHcCCCccEE
Q 018529          165 AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE-HDRPIQEVIAEMTNGGVDRS  243 (354)
Q Consensus       165 ~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~-~~~~~~~~i~~~~~~~~dvv  243 (354)
                      +++.++++|+|+|+|++|++++++|+..|. .|+++++++++.++++++|++.++++++ .+  +.+.+..+..+++|++
T Consensus       161 ~~~~~~~~vlV~g~g~vg~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~--~~~~~~~~~~~~~d~v  237 (345)
T cd08260         161 ARVKPGEWVAVHGCGGVGLSAVMIASALGA-RVIAVDIDDDKLELARELGAVATVNASEVED--VAAAVRDLTGGGAHVS  237 (345)
T ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHhCCCEEEccccchh--HHHHHHHHhCCCCCEE
Confidence            889999999999999999999999999999 8999999999999999999999998876 33  6677777766589999


Q ss_pred             EEcccChHhHHHHHHHhhCCCceEEEEcCCCCCce-eecchhhh-ccccEEEEEeccCCCCCCCHHHHHHHHHccCCCCC
Q 018529          244 VECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAV-FMTKPINV-LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELE  321 (354)
Q Consensus       244 ~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~-~~~~~~~~-~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  321 (354)
                      ||++|+...+..++++++++ |+++.+|....... ..+....+ .+++++.++...   ..+.++.+++++.++++.+.
T Consensus       238 i~~~g~~~~~~~~~~~l~~~-g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~~i~~~  313 (345)
T cd08260         238 VDALGIPETCRNSVASLRKR-GRHVQVGLTLGEEAGVALPMDRVVARELEIVGSHGM---PAHRYDAMLALIASGKLDPE  313 (345)
T ss_pred             EEcCCCHHHHHHHHHHhhcC-CEEEEeCCcCCCCCccccCHHHHhhcccEEEeCCcC---CHHHHHHHHHHHHcCCCChh
Confidence            99999767889999999997 99999987543221 22333223 467788776532   23578899999999988765


Q ss_pred             CceeeeeccccHHHHHHHHhcCCc-eeEEEe
Q 018529          322 KFITHRIPFSEINKAFEYMVKGEG-LRCIIS  351 (354)
Q Consensus       322 ~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~  351 (354)
                      +.+.+.++++++++|++.+.+++. +|+|++
T Consensus       314 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~v~~  344 (345)
T cd08260         314 PLVGRTISLDEAPDALAAMDDYATAGITVIT  344 (345)
T ss_pred             hheeEEecHHHHHHHHHHHHcCCCCceEEec
Confidence            556789999999999999988765 577653

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=100.00  E-value=7.5e-43  Score=323.56  Aligned_cols=336  Identities=18%  Similarity=0.226  Sum_probs=269.7

Q ss_pred             cchhcceeeecc--CCC---ceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCC----------CCCCCcccccc
Q 018529            7 LILTCKAAVAWE--AGK---PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ----------TPLFPRIFGHE   71 (354)
Q Consensus         7 ~~~~~~a~~~~~--~~~---~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~----------~~~~p~~~G~e   71 (354)
                      +|.+|+|+++..  ++.   .+++.++|.|.++++||+||+.++++|++|++...+...          ....+.++|||
T Consensus         9 ~~~~~~a~~~~~~~~g~~~~~~~~~~~~~p~l~~~evlI~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~G~e   88 (393)
T cd08246           9 VPEKMYAFAIRPERYGDPAQAIQLEDVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYHIGGSD   88 (393)
T ss_pred             CchhhhheeeecccCCCcccceEEeecCCCCCCCCEEEEEEEEEeeccchhhhhcCCCccccccccccCCCCCccccccc
Confidence            789999999863  222   388999999999999999999999999999987765311          01223589999


Q ss_pred             eeEEEEEeCCCCCCCCCCCEEEecccCCCCCCcccccCCCC-CCccccc----ccccceeeEEeeccceEECCCCCCccc
Q 018529           72 AAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRFSING-EPVNHFL----GTSTFSEYTVVHSGCVAKINPLAPLDK  146 (354)
Q Consensus        72 ~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~-~~~~~~~----~~g~~a~~~~v~~~~~~~~P~~~~~~~  146 (354)
                      ++|+|+++|++++.+++||+|++.+...|++|++|..+... |....+.    ..|+|++|+.+++..++++|+++++++
T Consensus        89 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~~g~~a~y~~v~~~~l~~iP~~l~~~~  168 (393)
T cd08246          89 ASGIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRIWGYETNYGSFAQFALVQATQLMPKPKHLSWEE  168 (393)
T ss_pred             eEEEEEEeCCCCCcCCCCCEEEEeccccccCcccccccccccccccccccccCCCCcceeEEEechHHeEECCCCCCHHH
Confidence            99999999999999999999999999999999999754322 2211122    248999999999999999999999999


Q ss_pred             hhhcccchhhhhhhhhhh--cCCCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCC
Q 018529          147 VCILSCGVSTGLGATLNV--AKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE  223 (354)
Q Consensus       147 aa~l~~~~~~a~~~l~~~--~~~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~  223 (354)
                      ++.+++++.+||+++...  ++++++++|+|+|+ |++|++++++|+.+|+ .++++++++++.++++++|++.++++.+
T Consensus       169 aa~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~-~vv~~~~s~~~~~~~~~~G~~~~i~~~~  247 (393)
T cd08246         169 AAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGA-NPVAVVSSEEKAEYCRALGAEGVINRRD  247 (393)
T ss_pred             HhhhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHcCCCEEEcccc
Confidence            999999999999997554  68999999999997 9999999999999999 7778889999999999999999888744


Q ss_pred             CC--------------------hhHHHHHHHHcCC--CccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeec
Q 018529          224 HD--------------------RPIQEVIAEMTNG--GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMT  281 (354)
Q Consensus       224 ~~--------------------~~~~~~i~~~~~~--~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~  281 (354)
                      .+                    ..+.+.+.+++++  ++|++||++|+ ..+..++++++++ |+++.+|...... ..+
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~-~~~  324 (393)
T cd08246         248 FDHWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGR-ATFPTSVFVCDRG-GMVVICAGTTGYN-HTY  324 (393)
T ss_pred             cccccccccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCch-HhHHHHHHHhccC-CEEEEEcccCCCC-CCC
Confidence            21                    1255667777765  79999999997 7788999999997 9999998654221 122


Q ss_pred             chh-hhccccEEEEEeccCCCCCCCHHHHHHHHHccCCCCCCceeeeeccccHHHHHHHHhcC-Cc-eeEEEe
Q 018529          282 KPI-NVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKG-EG-LRCIIS  351 (354)
Q Consensus       282 ~~~-~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~-~~-~k~vi~  351 (354)
                      ... .+.++.++.+++...   .+++.++++++.++.+.+  .++++|+++++++|++.+.++ +. +|+++-
T Consensus       325 ~~~~l~~~~~~i~g~~~~~---~~~~~~~~~~~~~~~l~~--~~~~~~~l~~~~~a~~~~~~~~~~~gkvvv~  392 (393)
T cd08246         325 DNRYLWMRQKRIQGSHFAN---DREAAEANRLVMKGRIDP--CLSKVFSLDETPDAHQLMHRNQHHVGNMAVL  392 (393)
T ss_pred             cHHHHhhheeEEEecccCc---HHHHHHHHHHHHcCCcee--eeeEEEeHHHHHHHHHHHHhCccccceEEEe
Confidence            222 234677788776433   246888999999997664  367899999999999999887 44 676653

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>PLN02702 L-idonate 5-dehydrogenase

Probab=100.00  E-value=2.3e-42  Score=317.20  Aligned_cols=341  Identities=27%  Similarity=0.418  Sum_probs=269.1

Q ss_pred             CCCcc--ccchhcceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCC---CCCCCcccccceeEE
Q 018529            1 MSSTA--GLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ---TPLFPRIFGHEAAGV   75 (354)
Q Consensus         1 m~~~~--~~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~---~~~~p~~~G~e~~G~   75 (354)
                      ||+-+  .+-.+|+++++..++. +++.+.+.|++.++||+||+.++++|++|+....+...   ....|.++|||++|+
T Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~   84 (364)
T PLN02702          6 MSSGEGSGVEEENMAAWLVGVNT-LKIQPFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGI   84 (364)
T ss_pred             cccCCCcccccccceEEEecCCc-eEEEeccCCCCCCCeEEEEEEEEEEchhhhHHHcCCCCccccCCCCcccccceeEE
Confidence            55543  2455677777777655 88999999889999999999999999999998765321   123577899999999


Q ss_pred             EEEeCCCCCCCCCCCEEEecccCCCCCCcccccCCC-CCCccccc----ccccceeeEEeeccceEECCCCCCccchhhc
Q 018529           76 VESVGEGVSDLEVGDHVLPVFTGECGDCRHCRFSIN-GEPVNHFL----GTSTFSEYTVVHSGCVAKINPLAPLDKVCIL  150 (354)
Q Consensus        76 V~~vG~~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~-~~~~~~~~----~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l  150 (354)
                      |+++|+++++|++||+|++.+..+|++|..|..+.. .|......    ..|+|++|+.++.+.++++|+++++.+++..
T Consensus        85 V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~c~~~~~~~~~~~~g~~~~y~~v~~~~~~~~P~~l~~~~aa~~  164 (364)
T PLN02702         85 IEEVGSEVKHLVVGDRVALEPGISCWRCNLCKEGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPENVSLEEGAMC  164 (364)
T ss_pred             EEEECCCCCCCCCCCEEEEcCCCCCCCCcchhCcCcccCCCccccCCCCCCCcccceEEcchHHeEECCCCCCHHHHhhh
Confidence            999999999999999999999999999999976542 22222212    2589999999999999999999999988763


Q ss_pred             ccchhhhhhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHH
Q 018529          151 SCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQE  230 (354)
Q Consensus       151 ~~~~~~a~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~  230 (354)
                       .++.++|+++ ...++.++++|+|+|+|++|.+++++|+.+|++.|+++++++++.++++++|++.++++.....++.+
T Consensus       165 -~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  242 (364)
T PLN02702        165 -EPLSVGVHAC-RRANIGPETNVLVMGAGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQLGADEIVLVSTNIEDVES  242 (364)
T ss_pred             -hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEecCcccccHHH
Confidence             2445578775 77889999999999989999999999999999778899999999999999999988776433233666


Q ss_pred             HHHHH---cCCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecch-hhhccccEEEEEeccCCCCCCCH
Q 018529          231 VIAEM---TNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP-INVLNERTLKGTFFGNYKPRTDL  306 (354)
Q Consensus       231 ~i~~~---~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~-~~~~~~~~i~g~~~~~~~~~~~~  306 (354)
                      .+.++   +.+++|+|||++|+...+..++++++++ |+++.+|.....  ..... ....+++++.+++..    ...+
T Consensus       243 ~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~~~~~~~~~~~~~~i~~~~~~----~~~~  315 (364)
T PLN02702        243 EVEEIQKAMGGGIDVSFDCVGFNKTMSTALEATRAG-GKVCLVGMGHNE--MTVPLTPAAAREVDVVGVFRY----RNTW  315 (364)
T ss_pred             HHHHHhhhcCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEccCCCC--CcccHHHHHhCccEEEEeccC----hHHH
Confidence            66554   3348999999999778899999999997 999999865422  12222 223478888887642    2468


Q ss_pred             HHHHHHHHccCCCCCCceeeeecc--ccHHHHHHHHhcCCc-eeEEEe
Q 018529          307 PSVVDMYMNKQLELEKFITHRIPF--SEINKAFEYMVKGEG-LRCIIS  351 (354)
Q Consensus       307 ~~~~~~~~~~~~~~~~~v~~~~~l--~~~~~a~~~~~~~~~-~k~vi~  351 (354)
                      +.+++++.++++.+.+.+.+.|++  +++++|++.+.+++. +|+||.
T Consensus       316 ~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~~kvv~~  363 (364)
T PLN02702        316 PLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKVMFN  363 (364)
T ss_pred             HHHHHHHHcCCCCchHheEEEeccChHHHHHHHHHHhcCCCceEEEEe
Confidence            889999999988765556788665  799999999887765 688875

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=100.00  E-value=1e-42  Score=316.72  Aligned_cols=317  Identities=19%  Similarity=0.241  Sum_probs=252.7

Q ss_pred             ccchhcceeeeccCC-C-c----eEEEE---eecCC-CCCCeEEEEEeeeecCccchhhhccCCCCCCCCccccc--cee
Q 018529            6 GLILTCKAAVAWEAG-K-P----LIIQD---VEVAP-PQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGH--EAA   73 (354)
Q Consensus         6 ~~~~~~~a~~~~~~~-~-~----l~~~~---~~~p~-~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~--e~~   73 (354)
                      ..++++|.+++-+.. . +    +++.+   .+.|. +++||||||+.|+++|+.|.....+......+|+++|+  |++
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~gevlVkv~a~~inp~~~~~~~~~~~~~~~p~~~G~~~~~~   83 (348)
T PLN03154          4 GQVVENKQVILKNYIDGIPKETDMEVKLGNKIELKAPKGSGAFLVKNLYLSCDPYMRGRMRDFHDSYLPPFVPGQRIEGF   83 (348)
T ss_pred             CccccceEEEEecCCCCCCCcccEEEEeecccCCCCCCCCCeEEEEEEEEccCHHHHHhhhccCCCCCCCcCCCCeeEee
Confidence            356677888885432 1 1    77776   36663 48999999999999999987654332222345889998  889


Q ss_pred             EEEEEeCCCCCCCCCCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccc--eEE--CCCCCCcc-chh
Q 018529           74 GVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGC--VAK--INPLAPLD-KVC  148 (354)
Q Consensus        74 G~V~~vG~~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~--~~~--~P~~~~~~-~aa  148 (354)
                      |+|..+|+++++|++||+|++.                          |+|+||+.++.+.  +++  +|++++++ +|+
T Consensus        84 G~v~~vg~~v~~~~~Gd~V~~~--------------------------~~~aey~~v~~~~~~~~~~~~P~~~~~~~~aa  137 (348)
T PLN03154         84 GVSKVVDSDDPNFKPGDLISGI--------------------------TGWEEYSLIRSSDNQLRKIQLQDDIPLSYHLG  137 (348)
T ss_pred             EEEEEEecCCCCCCCCCEEEec--------------------------CCcEEEEEEeccccceEEccCcCCCCHHHHHH
Confidence            9999999999999999999854                          5899999998853  544  59999986 688


Q ss_pred             hcccchhhhhhhhhhhcCCCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH-hcCCceEEcCCCCCh
Q 018529          149 ILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTDFVNTSEHDR  226 (354)
Q Consensus       149 ~l~~~~~~a~~~l~~~~~~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~-~lg~~~v~~~~~~~~  226 (354)
                      +++++++|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++.++++ ++|++.++++.+.+ 
T Consensus       138 ~l~~~~~TA~~al~~~~~~~~g~~VlV~GaaG~vG~~aiqlAk~~G~-~Vi~~~~~~~k~~~~~~~lGa~~vi~~~~~~-  215 (348)
T PLN03154        138 LLGMAGFTAYAGFYEVCSPKKGDSVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKLGFDEAFNYKEEP-  215 (348)
T ss_pred             HcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHhcCCCEEEECCCcc-
Confidence            899999999999878889999999999997 9999999999999999 8999999999999987 79999999986531 


Q ss_pred             hHHHHHHHHcCCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCce-e---ecchh-hhccccEEEEEeccCCC
Q 018529          227 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAV-F---MTKPI-NVLNERTLKGTFFGNYK  301 (354)
Q Consensus       227 ~~~~~i~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~-~---~~~~~-~~~~~~~i~g~~~~~~~  301 (354)
                      ++.+.+++.+++++|++||++|+ ..+..++++++++ |+++.+|....... .   ..... .+.+++++.|++...+.
T Consensus       216 ~~~~~i~~~~~~gvD~v~d~vG~-~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~  293 (348)
T PLN03154        216 DLDAALKRYFPEGIDIYFDNVGG-DMLDAALLNMKIH-GRIAVCGMVSLNSLSASQGIHNLYNLISKRIRMQGFLQSDYL  293 (348)
T ss_pred             cHHHHHHHHCCCCcEEEEECCCH-HHHHHHHHHhccC-CEEEEECccccCCCCCCCCcccHHHHhhccceEEEEEHHHHH
Confidence            27777887776689999999998 6889999999997 99999997542211 0   11222 23488999998754332


Q ss_pred             C--CCCHHHHHHHHHccCCCCCCceeeeeccccHHHHHHHHhcCCc-eeEEEecCC
Q 018529          302 P--RTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISMED  354 (354)
Q Consensus       302 ~--~~~~~~~~~~~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~~~d  354 (354)
                      .  .+.++++++++.+|++++.  +.++|+|+++++|++.+.+++. +|+||++.+
T Consensus       294 ~~~~~~~~~~~~l~~~G~l~~~--~~~~~~L~~~~~A~~~l~~g~~~GKvVl~~~~  347 (348)
T PLN03154        294 HLFPQFLENVSRYYKQGKIVYI--EDMSEGLESAPAALVGLFSGKNVGKQVIRVAK  347 (348)
T ss_pred             HHHHHHHHHHHHHHHCCCccCc--eecccCHHHHHHHHHHHHcCCCCceEEEEecC
Confidence            1  2357789999999987754  6678999999999999998886 699998753

>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

Probab=100.00  E-value=2.7e-42  Score=314.61  Aligned_cols=331  Identities=28%  Similarity=0.399  Sum_probs=270.0

Q ss_pred             cceeeeccCCCceEEEEeecCCCC-CCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 018529           11 CKAAVAWEAGKPLIIQDVEVAPPQ-AMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG   89 (354)
Q Consensus        11 ~~a~~~~~~~~~l~~~~~~~p~~~-~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~G   89 (354)
                      |||+++..++ .++++++++|.|. ++||+|++.++++|+.|+....+..+ ..+|.++|+|++|+|+++|++++++++|
T Consensus         1 ~~a~~~~~~~-~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~-~~~~~~~g~e~~G~V~~vG~~v~~~~~G   78 (344)
T cd08284           1 MKAVVFKGPG-DVRVEEVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIP-STPGFVLGHEFVGEVVEVGPEVRTLKVG   78 (344)
T ss_pred             CeeEEEecCC-CceEEeccCCCCCCCCeEEEEEEEeeccccchhhhcCCCC-CCCCcccccceEEEEEeeCCCccccCCC
Confidence            6899998775 4999999999985 99999999999999999988876544 3347789999999999999999999999


Q ss_pred             CEEEecccCCCCCCcccccCCCCCC-cccc-------cccccceeeEEeecc--ceEECCCCCCccchhhcccchhhhhh
Q 018529           90 DHVLPVFTGECGDCRHCRFSINGEP-VNHF-------LGTSTFSEYTVVHSG--CVAKINPLAPLDKVCILSCGVSTGLG  159 (354)
Q Consensus        90 d~V~~~~~~~~~~c~~c~~~~~~~~-~~~~-------~~~g~~a~~~~v~~~--~~~~~P~~~~~~~aa~l~~~~~~a~~  159 (354)
                      |+|++.+..+|++|.+|..+....+ ....       ...|+|++|+.++++  .++++|+++++++++.+++++++||+
T Consensus        79 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~~p~~l~~~~a~~l~~~~~ta~~  158 (344)
T cd08284          79 DRVVSPFTIACGECFYCRRGQSGRCAKGGLFGYAGSPNLDGAQAEYVRVPFADGTLLKLPDGLSDEAALLLGDILPTGYF  158 (344)
T ss_pred             CEEEEcccCCCCCChHHhCcCcccCCCCccccccccCCCCCceeEEEEcccccCceEECCCCCCHHHhhhhcCchHHHHh
Confidence            9999999999999999976543321 1111       125899999999975  99999999999999999999999999


Q ss_pred             hhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC-
Q 018529          160 ATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-  238 (354)
Q Consensus       160 ~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-  238 (354)
                      ++. ..++.++++|||+|+|.+|++++++|+.+|+.+|+++++++++.++++++|+. .++..+.+  +.+.+.+++++ 
T Consensus       159 ~~~-~~~~~~~~~vlI~g~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~-~~~~~~~~--~~~~l~~~~~~~  234 (344)
T cd08284         159 GAK-RAQVRPGDTVAVIGCGPVGLCAVLSAQVLGAARVFAVDPVPERLERAAALGAE-PINFEDAE--PVERVREATEGR  234 (344)
T ss_pred             hhH-hcCCccCCEEEEECCcHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHhCCe-EEecCCcC--HHHHHHHHhCCC
Confidence            974 57899999999998899999999999999975788888899999999999975 45555443  77778887776 


Q ss_pred             CccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhhccccEEEEEeccCCCCCCCHHHHHHHHHccCC
Q 018529          239 GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQL  318 (354)
Q Consensus       239 ~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~  318 (354)
                      ++|++||++|+...+..++++++++ |+++.+|..............+.+++++.+..   ...++.+.++++++.++++
T Consensus       235 ~~dvvid~~~~~~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~i  310 (344)
T cd08284         235 GADVVLEAVGGAAALDLAFDLVRPG-GVISSVGVHTAEEFPFPGLDAYNKNLTLRFGR---CPVRSLFPELLPLLESGRL  310 (344)
T ss_pred             CCCEEEECCCCHHHHHHHHHhcccC-CEEEEECcCCCCCccccHHHHhhcCcEEEEec---CCcchhHHHHHHHHHcCCC
Confidence            8999999999877899999999997 99999987642211111122234677776542   2234678999999999988


Q ss_pred             CCCCceeeeeccccHHHHHHHHhcCCceeEEEe
Q 018529          319 ELEKFITHRIPFSEINKAFEYMVKGEGLRCIIS  351 (354)
Q Consensus       319 ~~~~~v~~~~~l~~~~~a~~~~~~~~~~k~vi~  351 (354)
                      .+...+.+.+++++++++++.+.+++.+|+|++
T Consensus       311 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~Vi~  343 (344)
T cd08284         311 DLEFLIDHRMPLEEAPEAYRLFDKRKVLKVVLD  343 (344)
T ss_pred             ChHHhEeeeecHHHHHHHHHHHhcCCceEEEec
Confidence            765556788999999999998887666788774

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical

>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=3.5e-42  Score=313.49  Aligned_cols=324  Identities=22%  Similarity=0.326  Sum_probs=264.3

Q ss_pred             cceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCC-----------CCCCCcccccceeEEEEEe
Q 018529           11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ-----------TPLFPRIFGHEAAGVVESV   79 (354)
Q Consensus        11 ~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~-----------~~~~p~~~G~e~~G~V~~v   79 (354)
                      |||+++..+  ++++++.+.|+++++||+|||.++++|+.|+....|...           ...+|.++|+|++|+|+++
T Consensus         1 m~a~~~~~~--~~~~~~~~~p~~~~~~v~V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~v   78 (341)
T cd08262           1 MRAAVFRDG--PLVVRDVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGEVVDY   78 (341)
T ss_pred             CceEEEeCC--ceEEEecCCCCCCCCeEEEEEEEEEEcccchHHHcCCCcccccccccccccCCCCcccccceeEEEEEe
Confidence            689998766  599999999999999999999999999999998876321           2235788999999999999


Q ss_pred             CCCCCC-CCCCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhh
Q 018529           80 GEGVSD-LEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGL  158 (354)
Q Consensus        80 G~~~~~-~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~  158 (354)
                      |+++++ |++||+|++.+...|+.|+.|..+..+      ...|+|++|+.++.+.++++|+++++++++ +++++++||
T Consensus        79 G~~v~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~------~~~g~~~~~~~v~~~~~~~lP~~~s~~~a~-~~~~~~~a~  151 (341)
T cd08262          79 GPGTERKLKVGTRVTSLPLLLCGQGASCGIGLSP------EAPGGYAEYMLLSEALLLRVPDGLSMEDAA-LTEPLAVGL  151 (341)
T ss_pred             CCCCcCCCCCCCEEEecCCcCCCCChhhhCCCCc------CCCCceeeeEEechHHeEECCCCCCHHHhh-hhhhHHHHH
Confidence            999987 999999999999999999999533221      245899999999999999999999999877 667889999


Q ss_pred             hhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCCh--hHHHHHHHHc
Q 018529          159 GATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDR--PIQEVIAEMT  236 (354)
Q Consensus       159 ~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~--~~~~~i~~~~  236 (354)
                      ++ ...++++++++|||+|+|++|.+++|+|+.+|++.++++++++++.++++++|+++++++.+.+.  .+. .+....
T Consensus       152 ~~-~~~~~~~~g~~VlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~-~~~~~~  229 (341)
T cd08262         152 HA-VRRARLTPGEVALVIGCGPIGLAVIAALKARGVGPIVASDFSPERRALALAMGADIVVDPAADSPFAAWA-AELARA  229 (341)
T ss_pred             HH-HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEEcCCCcCHHHHHH-HHHHHh
Confidence            98 57889999999999988999999999999999967888888999999999999988888765431  222 334444


Q ss_pred             CC-CccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchh-hhccccEEEEEeccCCCCCCCHHHHHHHHH
Q 018529          237 NG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI-NVLNERTLKGTFFGNYKPRTDLPSVVDMYM  314 (354)
Q Consensus       237 ~~-~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~-~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~  314 (354)
                      .+ ++|++||++|+...+..++++++++ |+++.+|.......  .... .+.+++++.++...   ..++++++++++.
T Consensus       230 ~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~  303 (341)
T cd08262         230 GGPKPAVIFECVGAPGLIQQIIEGAPPG-GRIVVVGVCMESDN--IEPALAIRKELTLQFSLGY---TPEEFADALDALA  303 (341)
T ss_pred             CCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEECCCCCCCc--cCHHHHhhcceEEEEEecc---cHHHHHHHHHHHH
Confidence            44 8999999998855788899999997 99999987642221  1221 13467777654422   2246889999999


Q ss_pred             ccCCCCCCceeeeeccccHHHHHHHHhcCCc-eeEEEe
Q 018529          315 NKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIIS  351 (354)
Q Consensus       315 ~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~  351 (354)
                      ++.+.+.+.+.+.+++++++++++.+.+++. +|+|++
T Consensus       304 ~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~~~~kvvv~  341 (341)
T cd08262         304 EGKVDVAPMVTGTVGLDGVPDAFEALRDPEHHCKILVD  341 (341)
T ss_pred             cCCCChHHheEEEeeHHHHHHHHHHHhcCCCceEEEeC
Confidence            9988876667789999999999999988775 688763

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>PRK05396 tdh L-threonine 3-dehydrogenase; Validated

Probab=100.00  E-value=9.5e-42  Score=310.60  Aligned_cols=333  Identities=29%  Similarity=0.418  Sum_probs=269.0

Q ss_pred             cceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCC---CCCCCCcccccceeEEEEEeCCCCCCCC
Q 018529           11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKG---QTPLFPRIFGHEAAGVVESVGEGVSDLE   87 (354)
Q Consensus        11 ~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~---~~~~~p~~~G~e~~G~V~~vG~~~~~~~   87 (354)
                      ||++++.+++..+++.+.|.|.|+++||+||+.++++|++|+.++.+..   ....+|.++|||++|+|+++|+++++++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~v~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~   80 (341)
T PRK05396          1 MKALVKLKAEPGLWLTDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEVTGFK   80 (341)
T ss_pred             CceEEEecCCCceEEEECCCCCCCCCeEEEEEEEEEEcccchHhhcCCCcccccCCCCcccceeeEEEEEEeCCCCCcCC
Confidence            6899999988779999999999999999999999999999998765532   1234678899999999999999999999


Q ss_pred             CCCEEEecccCCCCCCcccccCCCCC-Cc---ccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhh
Q 018529           88 VGDHVLPVFTGECGDCRHCRFSINGE-PV---NHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLN  163 (354)
Q Consensus        88 ~Gd~V~~~~~~~~~~c~~c~~~~~~~-~~---~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~  163 (354)
                      +||+|++.+.++|+.|..|..+.... +.   .+....|+|++|+.++.+.++++|+++++.+++.+ .++.++++++..
T Consensus        81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~l~~~~~~~~-~~~~~~~~~~~~  159 (341)
T PRK05396         81 VGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKGVGVNRPGAFAEYLVIPAFNVWKIPDDIPDDLAAIF-DPFGNAVHTALS  159 (341)
T ss_pred             CCCEEEECCCCCCCCChhhhCcChhhCCCcceeeecCCCcceeeEEechHHeEECcCCCCHHHhHhh-hHHHHHHHHHHc
Confidence            99999999999999999997654321 11   11224589999999999999999999999888754 466666665432


Q ss_pred             hcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC-CccE
Q 018529          164 VAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDR  242 (354)
Q Consensus       164 ~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~~dv  242 (354)
                        ...+|++|+|.|+|++|.+++|+|+.+|+++|+++++++++.++++++|++.++++.+.+  +.+.+++++++ ++|+
T Consensus       160 --~~~~g~~vlV~~~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~lg~~~~~~~~~~~--~~~~~~~~~~~~~~d~  235 (341)
T PRK05396        160 --FDLVGEDVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYRLELARKMGATRAVNVAKED--LRDVMAELGMTEGFDV  235 (341)
T ss_pred             --CCCCCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCcEEecCcccc--HHHHHHHhcCCCCCCE
Confidence              346899999998899999999999999986688888899999999999999998887655  77888888776 8999


Q ss_pred             EEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhhccccEEEEEeccCCCCCCCHHHHHHHHHccCCCCCC
Q 018529          243 SVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEK  322 (354)
Q Consensus       243 v~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  322 (354)
                      ||||.|+...+..++++++++ |+++.+|.........+ ...+.+++++.++...  ...+.+..+++++.++ +.+.+
T Consensus       236 v~d~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~-~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~-~~~~~  310 (341)
T PRK05396        236 GLEMSGAPSAFRQMLDNMNHG-GRIAMLGIPPGDMAIDW-NKVIFKGLTIKGIYGR--EMFETWYKMSALLQSG-LDLSP  310 (341)
T ss_pred             EEECCCCHHHHHHHHHHHhcC-CEEEEEecCCCCCcccH-HHHhhcceEEEEEEcc--CccchHHHHHHHHHcC-CChhH
Confidence            999999878889999999997 99999987543222222 2223477888876522  1223466788888888 54555


Q ss_pred             ceeeeeccccHHHHHHHHhcCCceeEEEecC
Q 018529          323 FITHRIPFSEINKAFEYMVKGEGLRCIISME  353 (354)
Q Consensus       323 ~v~~~~~l~~~~~a~~~~~~~~~~k~vi~~~  353 (354)
                      .+.+.++++++.+||+.+.+++.+|+|++++
T Consensus       311 ~~~~~~~l~~~~~a~~~~~~~~~gk~vv~~~  341 (341)
T PRK05396        311 IITHRFPIDDFQKGFEAMRSGQSGKVILDWD  341 (341)
T ss_pred             heEEEEeHHHHHHHHHHHhcCCCceEEEecC
Confidence            5778999999999999988776679988764

>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase

Probab=100.00  E-value=1.2e-41  Score=310.26  Aligned_cols=332  Identities=29%  Similarity=0.465  Sum_probs=272.7

Q ss_pred             cceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 018529           11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD   90 (354)
Q Consensus        11 ~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd   90 (354)
                      |||+++.+++. +.+.+.+.|++.+++|+||+.++++|+.|+....+..+...+|.++|+|++|+|+++|++++.+++||
T Consensus         1 ~~~~~~~~~~~-~~~~~~~~~~l~~~~v~i~v~~~~l~~~d~~~~~g~~~~~~~~~~~g~~~~G~V~~~G~~v~~~~~Gd   79 (343)
T cd08235           1 MKAAVLHGPND-VRLEEVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHTDLKPPRILGHEIAGEIVEVGDGVTGFKVGD   79 (343)
T ss_pred             CeEEEEecCCc-eEEEEccCCCCCCCeEEEEEEEeeeccccHHHHcCCCccCCCCcccccceEEEEEeeCCCCCCCCCCC
Confidence            68999988875 99999999999999999999999999999998877553334577899999999999999999999999


Q ss_pred             EEEecccCCCCCCcccccCCCCC-Cccc---ccccccceeeEEeeccc-----eEECCCCCCccchhhcccchhhhhhhh
Q 018529           91 HVLPVFTGECGDCRHCRFSINGE-PVNH---FLGTSTFSEYTVVHSGC-----VAKINPLAPLDKVCILSCGVSTGLGAT  161 (354)
Q Consensus        91 ~V~~~~~~~~~~c~~c~~~~~~~-~~~~---~~~~g~~a~~~~v~~~~-----~~~~P~~~~~~~aa~l~~~~~~a~~~l  161 (354)
                      +|++.+..+|++|++|..++.+. +.+.   ....|+|++|+.++++.     ++++|+++++.+|+.+ +++.+||+++
T Consensus        80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~l  158 (343)
T cd08235          80 RVFVAPHVPCGECHYCLRGNENMCPNYKKFGNLYDGGFAEYVRVPAWAVKRGGVLKLPDNVSFEEAALV-EPLACCINAQ  158 (343)
T ss_pred             EEEEccCCCCCCChHHHCcCcccCCCcceeccCCCCcceeeEEecccccccccEEECCCCCCHHHHHhh-hHHHHHHHHH
Confidence            99999999999999997665432 2221   22458999999999998     9999999999999876 7889999987


Q ss_pred             hhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC-Cc
Q 018529          162 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GV  240 (354)
Q Consensus       162 ~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~~  240 (354)
                      . ..++++|++|||+|+|.+|++++|+|+..|++.|+++++++++.+.++++|.+.++++++.+  +.+.+.+++.+ ++
T Consensus       159 ~-~~~~~~g~~VlV~g~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~~~g~~~~~~~~~~~--~~~~i~~~~~~~~v  235 (343)
T cd08235         159 R-KAGIKPGDTVLVIGAGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKKLGADYTIDAAEED--LVEKVRELTDGRGA  235 (343)
T ss_pred             H-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEecCCccC--HHHHHHHHhCCcCC
Confidence            4 45899999999998899999999999999994488998999999999999998888877655  77788887776 89


Q ss_pred             cEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchh-hhccccEEEEEeccCCCCCCCHHHHHHHHHccCCC
Q 018529          241 DRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI-NVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLE  319 (354)
Q Consensus       241 dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~-~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~  319 (354)
                      |+|||++++...+..++++++++ |+++.++............. ...+++.+.++...   ..+.++++++++.++.+.
T Consensus       236 d~vld~~~~~~~~~~~~~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~~~~~~~l~~~~~l~  311 (343)
T cd08235         236 DVVIVATGSPEAQAQALELVRKG-GRILFFGGLPKGSTVNIDPNLIHYREITITGSYAA---SPEDYKEALELIASGKID  311 (343)
T ss_pred             CEEEECCCChHHHHHHHHHhhcC-CEEEEEeccCCCCCcccCHHHHhhCceEEEEEecC---ChhhHHHHHHHHHcCCCC
Confidence            99999999867889999999997 99999986543222222222 23367777765532   235688899999999877


Q ss_pred             CCCceeeeeccccHHHHHHHHhcCCceeEEEe
Q 018529          320 LEKFITHRIPFSEINKAFEYMVKGEGLRCIIS  351 (354)
Q Consensus       320 ~~~~v~~~~~l~~~~~a~~~~~~~~~~k~vi~  351 (354)
                      +.+.+...|+++++.++++.+.+++.+|+|++
T Consensus       312 ~~~~~~~~~~~~~~~~a~~~~~~~~~~k~vi~  343 (343)
T cd08235         312 VKDLITHRFPLEDIEEAFELAADGKSLKIVIT  343 (343)
T ss_pred             hHHheeeEeeHHHHHHHHHHHhCCCcEEEEeC
Confidence            54446788999999999999988774577764

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i

>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH)

Probab=100.00  E-value=9.3e-42  Score=314.07  Aligned_cols=332  Identities=26%  Similarity=0.355  Sum_probs=266.9

Q ss_pred             cceeeeccCCCceEEEEeecCCC-CCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 018529           11 CKAAVAWEAGKPLIIQDVEVAPP-QAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG   89 (354)
Q Consensus        11 ~~a~~~~~~~~~l~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~G   89 (354)
                      ||++++.+++. ++++++|+|.+ +++||+|||.++++|++|++...|..+ ..+|.++|||++|+|+++|++++.+++|
T Consensus         1 m~~~~~~~~~~-~~~~~~~~p~~~~~~evlv~v~a~~i~~~D~~~~~g~~~-~~~p~~~g~e~~G~V~~vG~~v~~~~~G   78 (375)
T cd08282           1 MKAVVYGGPGN-VAVEDVPDPKIEHPTDAIVRITTTAICGSDLHMYRGRTG-AEPGLVLGHEAMGEVEEVGSAVESLKVG   78 (375)
T ss_pred             CceEEEecCCc-eeEEeCCCCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCC-CCCCceeccccEEEEEEeCCCCCcCCCC
Confidence            68899988774 99999999996 799999999999999999999877554 3458899999999999999999999999


Q ss_pred             CEEEecccCCCCCCcccccCCCCCCc-c---------cc----cccccceeeEEeecc--ceEECCCCCCcc---chhhc
Q 018529           90 DHVLPVFTGECGDCRHCRFSINGEPV-N---------HF----LGTSTFSEYTVVHSG--CVAKINPLAPLD---KVCIL  150 (354)
Q Consensus        90 d~V~~~~~~~~~~c~~c~~~~~~~~~-~---------~~----~~~g~~a~~~~v~~~--~~~~~P~~~~~~---~aa~l  150 (354)
                      |+|++.+..+|+.|..|..+...... +         ++    ...|+|++|+.+|.+  .++++|+++++.   +++.+
T Consensus        79 d~V~~~~~~~~g~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~~lP~~~~~~~~~~~a~~  158 (375)
T cd08282          79 DRVVVPFNVACGRCRNCKRGLTGVCLTVNPGRAGGAYGYVDMGPYGGGQAEYLRVPYADFNLLKLPDRDGAKEKDDYLML  158 (375)
T ss_pred             CEEEEeCCCCCCCCHHHHCcCcccCCCCCcccccccccccccCCCCCeeeeEEEeecccCcEEECCCCCChhhhhheeee
Confidence            99999999999999998765432111 0         11    124899999999976  899999999998   56778


Q ss_pred             ccchhhhhhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHH
Q 018529          151 SCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQE  230 (354)
Q Consensus       151 ~~~~~~a~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~  230 (354)
                      .+++++||+++ ..+++++|++|+|.|+|++|++++|+|+++|+.+|+++++++++.++++++|+ ..+++.+.+  +.+
T Consensus       159 ~~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vg~~~~~~a~~~G~~~vi~~~~~~~~~~~~~~~g~-~~v~~~~~~--~~~  234 (375)
T cd08282         159 SDIFPTGWHGL-ELAGVQPGDTVAVFGAGPVGLMAAYSAILRGASRVYVVDHVPERLDLAESIGA-IPIDFSDGD--PVE  234 (375)
T ss_pred             cchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCC-eEeccCccc--HHH
Confidence            88999999997 78899999999999889999999999999997678889999999999999998 455655433  777


Q ss_pred             HHHHHcCCCccEEEEcccChH-----------hHHHHHHHhhCCCceEEEEcCCCCCce-----------eecchhh-hc
Q 018529          231 VIAEMTNGGVDRSVECTGNID-----------NMISAFECVHDGWGVAVLVGVPSKDAV-----------FMTKPIN-VL  287 (354)
Q Consensus       231 ~i~~~~~~~~dvv~d~~g~~~-----------~~~~~~~~l~~~~g~~v~~g~~~~~~~-----------~~~~~~~-~~  287 (354)
                      .+.+++++++|++|||+|+..           .+..++++++++ |+++.+|.......           ..+.... +.
T Consensus       235 ~i~~~~~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (375)
T cd08282         235 QILGLEPGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPG-GGIGIVGVYVAEDPGAGDAAAKQGELSFDFGLLWA  313 (375)
T ss_pred             HHHHhhCCCCCEEEECCCCcccccccccchHHHHHHHHHHhhcC-cEEEEEeccCCcccccccccccCccccccHHHHHh
Confidence            787776668999999998742           488999999997 99998876431100           1112222 23


Q ss_pred             cccEEEEEeccCCCCCCCHHHHHHHHHccCCCCCCceeeeeccccHHHHHHHHhcCCceeEEEec
Q 018529          288 NERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISM  352 (354)
Q Consensus       288 ~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~~k~vi~~  352 (354)
                      ++..+.+...   ...+.+..+++++.++++.+...+.+.|+++++++|++.+.+++.+|+|+++
T Consensus       314 ~~~~~~~~~~---~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~kvvv~~  375 (375)
T cd08282         314 KGLSFGTGQA---PVKKYNRQLRDLILAGRAKPSFVVSHVISLEDAPEAYARFDKRLETKVVIKP  375 (375)
T ss_pred             cCcEEEEecC---CchhhHHHHHHHHHcCCCChHHcEEEEeeHHHHHHHHHHHhcCCceEEEeCC
Confidence            5556655432   1235688899999999887655578999999999999999887756888753

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=100.00  E-value=7.8e-42  Score=316.87  Aligned_cols=338  Identities=18%  Similarity=0.234  Sum_probs=270.9

Q ss_pred             cchhcceeeecc--CCC---ceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCC----------CCCCCC-ccccc
Q 018529            7 LILTCKAAVAWE--AGK---PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKG----------QTPLFP-RIFGH   70 (354)
Q Consensus         7 ~~~~~~a~~~~~--~~~---~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~----------~~~~~p-~~~G~   70 (354)
                      +|.+|||+++..  +++   .+++.+.+.|.|+++|++||+.++++|++|.+...+..          .....| .++||
T Consensus         4 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~p~l~~~evlV~v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~G~   83 (398)
T TIGR01751         4 VPETMYAFAIREERDGDPRQAIQLEVVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGRDDLPFHIIGS   83 (398)
T ss_pred             cchhhhheEEecccCCCcccceEEeecCCCCCCCCeEEEEEEEEecCchhhhhhcCCccchhhhhcccCCCCCCceeccc
Confidence            688999999954  443   38999999999999999999999999999987654421          011223 37999


Q ss_pred             ceeEEEEEeCCCCCCCCCCCEEEecccCCCCCCcccccCCCC-CCccccc----ccccceeeEEeeccceEECCCCCCcc
Q 018529           71 EAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRFSING-EPVNHFL----GTSTFSEYTVVHSGCVAKINPLAPLD  145 (354)
Q Consensus        71 e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~-~~~~~~~----~~g~~a~~~~v~~~~~~~~P~~~~~~  145 (354)
                      |++|+|+++|++++.+++||+|++.+...|++|++|+.+... +......    ..|+|+||+.++++.++++|++++++
T Consensus        84 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~ae~~~v~~~~~~~vP~~l~~~  163 (398)
T TIGR01751        84 DASGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRVGDPMLSSEQRIWGYETNFGSFAEFALVKDYQLMPKPKHLTWE  163 (398)
T ss_pred             ceEEEEEEeCCCCCCCCCCCEEEEccccccCCchhhccCccccccccccccccCCCccceEEEEechHHeEECCCCCCHH
Confidence            999999999999999999999999999999999999865322 2221122    34899999999999999999999999


Q ss_pred             chhhcccchhhhhhhhhh--hcCCCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCC
Q 018529          146 KVCILSCGVSTGLGATLN--VAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS  222 (354)
Q Consensus       146 ~aa~l~~~~~~a~~~l~~--~~~~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~  222 (354)
                      +++.+.+.+.+||+++..  .++++++++|+|+|+ |++|++++++|+.+|+ +++++++++++.+.++++|++.+++.+
T Consensus       164 ~aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~-~vi~~~~~~~~~~~~~~~g~~~~v~~~  242 (398)
T TIGR01751       164 EAACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGG-NPVAVVSSPEKAEYCRELGAEAVIDRN  242 (398)
T ss_pred             HHhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHcCCCEEecCC
Confidence            999999999999998654  477899999999997 9999999999999999 777788899999999999999999875


Q ss_pred             CCC--------------------hhHHHHHHHHcCC-CccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeec
Q 018529          223 EHD--------------------RPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMT  281 (354)
Q Consensus       223 ~~~--------------------~~~~~~i~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~  281 (354)
                      +.+                    ..+.+.+.+++.+ ++|++|||+|. ..+..++++++++ |+++.+|..... ....
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~-~~~~  319 (398)
T TIGR01751       243 DFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGR-ATFPTSVFVCRRG-GMVVICGGTTGY-NHDY  319 (398)
T ss_pred             CcchhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcH-HHHHHHHHhhccC-CEEEEEccccCC-CCCc
Confidence            421                    1255667777776 89999999987 6788999999997 999999876422 1222


Q ss_pred             chh-hhccccEEEEEeccCCCCCCCHHHHHHHHHccCCCCCCceeeeeccccHHHHHHHHhcCCc-eeEEEecC
Q 018529          282 KPI-NVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISME  353 (354)
Q Consensus       282 ~~~-~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~~~  353 (354)
                      ... .+.++.++.++.....   .+++++++++.++++...  +++++++++++++++.+.+++. +|+|+.+.
T Consensus       320 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~l~~~--~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~~  388 (398)
T TIGR01751       320 DNRYLWMRQKRIQGSHFANL---REAWEANRLVAKGRIDPT--LSKVYPLEEIGQAHQDVHRNHHQGNVAVLVL  388 (398)
T ss_pred             CHHHHhhcccEEEccccCcH---HHHHHHHHHHHCCCcccc--eeeEEcHHHHHHHHHHHHcCCCCceEEEEeC
Confidence            222 2336667777654322   347889999999977643  6789999999999999988775 68888764

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=2.1e-41  Score=307.89  Aligned_cols=329  Identities=32%  Similarity=0.523  Sum_probs=272.8

Q ss_pred             cceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 018529           11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD   90 (354)
Q Consensus        11 ~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd   90 (354)
                      |||+++.+++. +++.+.+.|.++++||+|+|.++++|+.|+....+..+...+|.++|+|++|+|+.+|++++.|++||
T Consensus         1 ~~a~~~~~~~~-~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~Gd   79 (337)
T cd08261           1 MKALVCEKPGR-LEVVDIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRNPFASYPRILGHELSGEVVEVGEGVAGLKVGD   79 (337)
T ss_pred             CeEEEEeCCCc-eEEEECCCCCCCCCeEEEEEEEEeEcccChHHHcCCCCcCCCCcccccccEEEEEEeCCCCCCCCCCC
Confidence            68999988875 99999999999999999999999999999998877655445578899999999999999999999999


Q ss_pred             EEEecccCCCCCCcccccCCCCCCcc----cccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhcC
Q 018529           91 HVLPVFTGECGDCRHCRFSINGEPVN----HFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK  166 (354)
Q Consensus        91 ~V~~~~~~~~~~c~~c~~~~~~~~~~----~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~~  166 (354)
                      +|++.+..+|+.|..|..+..+.+..    .....|+|++|+.++++ ++++|+++++++++++ ..++++++++ ...+
T Consensus        80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~-~~~~p~~~~~~~aa~~-~~~~~a~~~~-~~~~  156 (337)
T cd08261          80 RVVVDPYISCGECYACRKGRPNCCENLQVLGVHRDGGFAEYIVVPAD-ALLVPEGLSLDQAALV-EPLAIGAHAV-RRAG  156 (337)
T ss_pred             EEEECCCCCCCCChhhhCcCcccCCCCCeeeecCCCcceeEEEechh-eEECCCCCCHHHhhhh-chHHHHHHHH-HhcC
Confidence            99998888999999996544332211    12236899999999999 9999999999999877 4778888876 7789


Q ss_pred             CCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC-CccEEEE
Q 018529          167 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVE  245 (354)
Q Consensus       167 ~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~~dvv~d  245 (354)
                      ++++++|||+|+|.+|.+++|+|+.+|. +|+++++++++.++++++|+++++++.+.+  +.+.+.+++++ ++|++||
T Consensus       157 l~~g~~vLI~g~g~vG~~a~~lA~~~g~-~v~~~~~s~~~~~~~~~~g~~~v~~~~~~~--~~~~l~~~~~~~~vd~vld  233 (337)
T cd08261         157 VTAGDTVLVVGAGPIGLGVIQVAKARGA-RVIVVDIDDERLEFARELGADDTINVGDED--VAARLRELTDGEGADVVID  233 (337)
T ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEECCCHHHHHHHHHhCCCEEecCcccC--HHHHHHHHhCCCCCCEEEE
Confidence            9999999999889999999999999999 899998999999999999999999887754  77888888776 8999999


Q ss_pred             cccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhhc-cccEEEEEeccCCCCCCCHHHHHHHHHccCCCCCCce
Q 018529          246 CTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFI  324 (354)
Q Consensus       246 ~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  324 (354)
                      +.|+...+..++++++++ |+++.++.....  ..+....+. +++++.+..   ....+.++++++++.++.+.+.+.+
T Consensus       234 ~~g~~~~~~~~~~~l~~~-G~~i~~g~~~~~--~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~~i~~~~~~  307 (337)
T cd08261         234 ATGNPASMEEAVELVAHG-GRVVLVGLSKGP--VTFPDPEFHKKELTILGSR---NATREDFPDVIDLLESGKVDPEALI  307 (337)
T ss_pred             CCCCHHHHHHHHHHHhcC-CEEEEEcCCCCC--CccCHHHHHhCCCEEEEec---cCChhhHHHHHHHHHcCCCChhhhe
Confidence            998877889999999997 999999865422  222222233 667776653   2233568889999999988763346


Q ss_pred             eeeeccccHHHHHHHHhcCC-c-eeEEEec
Q 018529          325 THRIPFSEINKAFEYMVKGE-G-LRCIISM  352 (354)
Q Consensus       325 ~~~~~l~~~~~a~~~~~~~~-~-~k~vi~~  352 (354)
                      ...++++++.++++.+.+++ . +|+|+++
T Consensus       308 ~~~~~~~~~~~a~~~~~~~~~~~~k~v~~~  337 (337)
T cd08261         308 THRFPFEDVPEAFDLWEAPPGGVIKVLIEF  337 (337)
T ss_pred             EEEeeHHHHHHHHHHHhcCCCceEEEEEeC
Confidence            78999999999999998873 4 6888864

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,

>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like

Probab=100.00  E-value=1.2e-41  Score=310.61  Aligned_cols=330  Identities=28%  Similarity=0.406  Sum_probs=270.6

Q ss_pred             cceeeeccCCCceEEEEeecCCC-CCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 018529           11 CKAAVAWEAGKPLIIQDVEVAPP-QAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG   89 (354)
Q Consensus        11 ~~a~~~~~~~~~l~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~G   89 (354)
                      |||+++++++. +++.+.|.|.| +++||+||+.++++|++|+..+.|..+. ..|.++|||++|+|+++|+++..+++|
T Consensus         1 m~~~~~~~~~~-~~~~~~~~p~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~-~~~~~~g~e~~G~V~~vG~~v~~~~~G   78 (345)
T cd08287           1 MRATVIHGPGD-IRVEEVPDPVIEEPTDAVIRVVATCVCGSDLWPYRGVSPT-RAPAPIGHEFVGVVEEVGSEVTSVKPG   78 (345)
T ss_pred             CceeEEecCCc-eeEEeCCCCCCCCCCeEEEEEeeeeecccchhhhcCCCCC-CCCcccccceEEEEEEeCCCCCccCCC
Confidence            78999988776 99999999996 8999999999999999999888765442 347899999999999999999999999


Q ss_pred             CEEEecccCCCCCCcccccCCCC-CCcccc---cccccceeeEEeecc--ceEECCCCCCccchh-----hcccchhhhh
Q 018529           90 DHVLPVFTGECGDCRHCRFSING-EPVNHF---LGTSTFSEYTVVHSG--CVAKINPLAPLDKVC-----ILSCGVSTGL  158 (354)
Q Consensus        90 d~V~~~~~~~~~~c~~c~~~~~~-~~~~~~---~~~g~~a~~~~v~~~--~~~~~P~~~~~~~aa-----~l~~~~~~a~  158 (354)
                      |+|++.+..+|+.|.+|..+... +....+   ...|+|++|+.++.+  .++++|++++++.+.     .+.+.+++||
T Consensus        79 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lP~~l~~~~~~~~~~~~l~~~~~~a~  158 (345)
T cd08287          79 DFVIAPFAISDGTCPFCRAGFTTSCVHGGFWGAFVDGGQGEYVRVPLADGTLVKVPGSPSDDEDLLPSLLALSDVMGTGH  158 (345)
T ss_pred             CEEEeccccCCCCChhhhCcCcccCCCCCcccCCCCCceEEEEEcchhhCceEECCCCCChhhhhhhhhHhhhcHHHHHH
Confidence            99998677889999999765432 222112   234899999999975  999999999882221     2235788899


Q ss_pred             hhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC
Q 018529          159 GATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG  238 (354)
Q Consensus       159 ~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~  238 (354)
                      +++ ..+++++|++|+|.|+|++|++++|+|+..|++.++++++++++.++++++|++.++++.+.+  +.+.+.+++++
T Consensus       159 ~~~-~~~~~~~g~~vlI~g~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~ga~~v~~~~~~~--~~~~i~~~~~~  235 (345)
T cd08287         159 HAA-VSAGVRPGSTVVVVGDGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAREFGATDIVAERGEE--AVARVRELTGG  235 (345)
T ss_pred             HHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCceEecCCccc--HHHHHHHhcCC
Confidence            985 578899999999998899999999999999996699999999999999999999999887654  77788888776


Q ss_pred             -CccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecch-hhhccccEEEEEeccCCCCCCCHHHHHHHHHcc
Q 018529          239 -GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP-INVLNERTLKGTFFGNYKPRTDLPSVVDMYMNK  316 (354)
Q Consensus       239 -~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~-~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~  316 (354)
                       ++|+++|++|+...+..++++++++ |+++.++....  ...+.. ..+.+++++.+...   ...+.++++++++.++
T Consensus       236 ~~~d~il~~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~  309 (345)
T cd08287         236 VGADAVLECVGTQESMEQAIAIARPG-GRVGYVGVPHG--GVELDVRELFFRNVGLAGGPA---PVRRYLPELLDDVLAG  309 (345)
T ss_pred             CCCCEEEECCCCHHHHHHHHHhhccC-CEEEEecccCC--CCccCHHHHHhcceEEEEecC---CcHHHHHHHHHHHHcC
Confidence             8999999999878899999999997 99999986542  222333 33558888877532   1234688999999999


Q ss_pred             CCCCCCceeeeeccccHHHHHHHHhcCCceeEEEe
Q 018529          317 QLELEKFITHRIPFSEINKAFEYMVKGEGLRCIIS  351 (354)
Q Consensus       317 ~~~~~~~v~~~~~l~~~~~a~~~~~~~~~~k~vi~  351 (354)
                      ++.+.+.+.+.++++++++|++.+.+++..|++|+
T Consensus       310 ~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~k~~~~  344 (345)
T cd08287         310 RINPGRVFDLTLPLDEVAEGYRAMDERRAIKVLLR  344 (345)
T ss_pred             CCCHHHhEEeeecHHHHHHHHHHHhCCCceEEEeC
Confidence            88765556789999999999999888777798885

This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=3.5e-41  Score=311.09  Aligned_cols=332  Identities=27%  Similarity=0.372  Sum_probs=264.8

Q ss_pred             cceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCC------C-CCCCCcccccceeEEEEEeCCCC
Q 018529           11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKG------Q-TPLFPRIFGHEAAGVVESVGEGV   83 (354)
Q Consensus        11 ~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~------~-~~~~p~~~G~e~~G~V~~vG~~~   83 (354)
                      +.+.++.. . ++++++.+.|+++++||+||+.++++|++|+..+.+..      + ...+|.++|||++|+|+++|+++
T Consensus        29 ~~~~~~~~-~-~~~~~~~~~p~~~~~ev~V~v~a~gi~~~D~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v  106 (384)
T cd08265          29 LGSKVWRY-P-ELRVEDVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGVVEKTGKNV  106 (384)
T ss_pred             ceeEEEeC-C-CEEEEECCCCCCCCCEEEEEEEEEEEcHhHHHHHcCCCCcccccCcccCCCcccccceEEEEEEECCCC
Confidence            34444443 3 39999999999999999999999999999998876321      1 13457899999999999999999


Q ss_pred             CCCCCCCEEEecccCCCCCCcccccCCCC-CCcccccc---cccceeeEEeeccceEECCCCC-------Cccchhhccc
Q 018529           84 SDLEVGDHVLPVFTGECGDCRHCRFSING-EPVNHFLG---TSTFSEYTVVHSGCVAKINPLA-------PLDKVCILSC  152 (354)
Q Consensus        84 ~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~-~~~~~~~~---~g~~a~~~~v~~~~~~~~P~~~-------~~~~aa~l~~  152 (354)
                      ++|++||+|++.+..+|+.|++|+.+... |..+...+   .|+|++|+.++++.++++|+++       ++. +++++.
T Consensus       107 ~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~g~~~~~v~v~~~~~~~lP~~~~~~~~~~~~~-~a~~~~  185 (384)
T cd08265         107 KNFEKGDPVTAEEMMWCGMCRACRSGSPNHCKNLKELGFSADGAFAEYIAVNARYAWEINELREIYSEDKAFE-AGALVE  185 (384)
T ss_pred             CCCCCCCEEEECCCCCCCCChhhhCcCcccCCCcceeeecCCCcceeeEEechHHeEECCccccccccCCCHH-Hhhhhh
Confidence            99999999999999999999999866533 22222222   5899999999999999999864       444 566777


Q ss_pred             chhhhhhhhhhh-cCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCC-ChhHHH
Q 018529          153 GVSTGLGATLNV-AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEH-DRPIQE  230 (354)
Q Consensus       153 ~~~~a~~~l~~~-~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~-~~~~~~  230 (354)
                      ++++||+++... .++++|++|||+|+|++|++++++|+..|+.+|+++++++++.+.++++|+++++++.+. ..++.+
T Consensus       186 ~~~ta~~al~~~~~~~~~g~~VlV~g~g~vG~~ai~lA~~~G~~~vi~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~  265 (384)
T cd08265         186 PTSVAYNGLFIRGGGFRPGAYVVVYGAGPIGLAAIALAKAAGASKVIAFEISEERRNLAKEMGADYVFNPTKMRDCLSGE  265 (384)
T ss_pred             HHHHHHHHHHhhcCCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcccccccccHHH
Confidence            889999997655 689999999999889999999999999998779999999999999999999988887653 224777


Q ss_pred             HHHHHcCC-CccEEEEcccCh-HhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhh-ccccEEEEEeccCCCCCCCHH
Q 018529          231 VIAEMTNG-GVDRSVECTGNI-DNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFFGNYKPRTDLP  307 (354)
Q Consensus       231 ~i~~~~~~-~~dvv~d~~g~~-~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~~~~~~~~  307 (354)
                      .+.+++.+ ++|+|+|++|.+ ..+..++++++++ |+++.+|.....  .......+ .+..++.++...  .....+.
T Consensus       266 ~v~~~~~g~gvDvvld~~g~~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~~~~~~~~~~~~~~l~~~~~~--~~~~~~~  340 (384)
T cd08265         266 KVMEVTKGWGADIQVEAAGAPPATIPQMEKSIAIN-GKIVYIGRAATT--VPLHLEVLQVRRAQIVGAQGH--SGHGIFP  340 (384)
T ss_pred             HHHHhcCCCCCCEEEECCCCcHHHHHHHHHHHHcC-CEEEEECCCCCC--CcccHHHHhhCceEEEEeecc--CCcchHH
Confidence            88888877 899999999873 4788999999997 999999865422  22222222 356677776532  2234689


Q ss_pred             HHHHHHHccCCCCCCceeeeeccccHHHHHHHHhcCCceeEEE
Q 018529          308 SVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCII  350 (354)
Q Consensus       308 ~~~~~~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~~k~vi  350 (354)
                      ++++++.++.+.+..++.+.|+++++.+|++.+.++..+|+|+
T Consensus       341 ~~~~ll~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvv  383 (384)
T cd08265         341 SVIKLMASGKIDMTKIITARFPLEGIMEAIKAASERTDGKITI  383 (384)
T ss_pred             HHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcCCCceEEe
Confidence            9999999998876555778899999999999977766667765

This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=100.00  E-value=2.1e-41  Score=306.30  Aligned_cols=309  Identities=22%  Similarity=0.293  Sum_probs=258.3

Q ss_pred             cceeeeccCCCc---eEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCC-CCCCCcccccceeEEEEEeCCCCCCC
Q 018529           11 CKAAVAWEAGKP---LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ-TPLFPRIFGHEAAGVVESVGEGVSDL   86 (354)
Q Consensus        11 ~~a~~~~~~~~~---l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~-~~~~p~~~G~e~~G~V~~vG~~~~~~   86 (354)
                      |||+++.+++.+   +++.++|.|.+.++||+|||.++++|++|+..+.|..+ ....|.++|||++|+|+++|++++++
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~   80 (324)
T cd08292           1 MRAAVHTQFGDPADVLEIGEVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYGYKPELPAIGGSEAVGVVDAVGEGVKGL   80 (324)
T ss_pred             CeeEEEccCCChhHeEEEeecCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCCCCCcceEEEEEEeCCCCCCC
Confidence            689999887753   78899999999999999999999999999998877654 23468899999999999999999999


Q ss_pred             CCCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhcC
Q 018529           87 EVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK  166 (354)
Q Consensus        87 ~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~~  166 (354)
                      ++||+|++.+                       ..|+|++|+.++++.++++|+++++++++.+++.+.++|+++ ...+
T Consensus        81 ~~Gd~V~~~~-----------------------~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~~-~~~~  136 (324)
T cd08292          81 QVGQRVAVAP-----------------------VHGTWAEYFVAPADGLVPLPDGISDEVAAQLIAMPLSALMLL-DFLG  136 (324)
T ss_pred             CCCCEEEecc-----------------------CCCcceeEEEEchHHeEECCCCCCHHHhhhccccHHHHHHHH-HhhC
Confidence            9999998652                       247999999999999999999999999999998999999985 5688


Q ss_pred             CCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC-CccEEE
Q 018529          167 PERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSV  244 (354)
Q Consensus       167 ~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~~dvv~  244 (354)
                      +++|++|||+|+ |.+|++++|+|+.+|+ .++++.+++++.+.++++|++.++++.+.+  +.+.+.+++++ ++|+||
T Consensus       137 ~~~g~~vlI~g~~g~ig~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~i~~~~~~~~~d~v~  213 (324)
T cd08292         137 VKPGQWLIQNAAGGAVGKLVAMLAAARGI-NVINLVRRDAGVAELRALGIGPVVSTEQPG--WQDKVREAAGGAPISVAL  213 (324)
T ss_pred             CCCCCEEEEcccccHHHHHHHHHHHHCCC-eEEEEecCHHHHHHHHhcCCCEEEcCCCch--HHHHHHHHhCCCCCcEEE
Confidence            999999999987 9999999999999999 788888888888888889998888876654  88888888887 999999


Q ss_pred             EcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchh-hhccccEEEEEeccCCCC-------CCCHHHHHHHHHcc
Q 018529          245 ECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI-NVLNERTLKGTFFGNYKP-------RTDLPSVVDMYMNK  316 (354)
Q Consensus       245 d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~-~~~~~~~i~g~~~~~~~~-------~~~~~~~~~~~~~~  316 (354)
                      |++|+ .....++++++++ |+++.+|... .....+... .+.++.++.++....+..       .+.+..+++++.++
T Consensus       214 d~~g~-~~~~~~~~~l~~~-g~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g  290 (324)
T cd08292         214 DSVGG-KLAGELLSLLGEG-GTLVSFGSMS-GEPMQISSGDLIFKQATVRGFWGGRWSQEMSVEYRKRMIAELLTLALKG  290 (324)
T ss_pred             ECCCC-hhHHHHHHhhcCC-cEEEEEecCC-CCCCcCCHHHHhhCCCEEEEEEcHHhhhhcCHHHHHHHHHHHHHHHHCC
Confidence            99998 5778999999997 9999998753 222222222 234888888877543211       13578899999999


Q ss_pred             CCCCCCceeeeeccccHHHHHHHHhcCCc-eeEEEe
Q 018529          317 QLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIIS  351 (354)
Q Consensus       317 ~~~~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~  351 (354)
                      .+.+.  +.+.|+++++.+|++.+.+++. +|+|++
T Consensus       291 ~i~~~--~~~~~~~~~~~~a~~~~~~~~~~~kvvv~  324 (324)
T cd08292         291 QLLLP--VEAVFDLGDAAKAAAASMRPGRAGKVLLR  324 (324)
T ss_pred             CccCc--cccEecHHHHHHHHHHHHcCCCCceEEeC
Confidence            87754  4678999999999999887654 577763

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=3.3e-41  Score=304.28  Aligned_cols=312  Identities=26%  Similarity=0.379  Sum_probs=256.1

Q ss_pred             cceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 018529           11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD   90 (354)
Q Consensus        11 ~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd   90 (354)
                      |||+++.++++ +++.+++.|+++++||+||+.++++|++|+....|..+   .|.++|||++|+|+++|++   +++||
T Consensus         1 ~~a~~~~~~~~-~~~~~~~~p~~~~~~vlV~v~a~~i~~~d~~~~~g~~~---~~~~~G~e~~G~Vv~~G~~---~~~G~   73 (319)
T cd08242           1 MKALVLDGGLD-LRVEDLPKPEPPPGEALVRVLLAGICNTDLEIYKGYYP---FPGVPGHEFVGIVEEGPEA---ELVGK   73 (319)
T ss_pred             CeeEEEeCCCc-EEEEECCCCCCCCCeEEEEEEEEEEccccHHHHcCCCC---CCCccCceEEEEEEEeCCC---CCCCC
Confidence            68999988764 99999999999999999999999999999998876443   5778999999999999987   67999


Q ss_pred             EEEecccCCCCCCcccccCCCCC----Ccccc-cccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhc
Q 018529           91 HVLPVFTGECGDCRHCRFSINGE----PVNHF-LGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVA  165 (354)
Q Consensus        91 ~V~~~~~~~~~~c~~c~~~~~~~----~~~~~-~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~  165 (354)
                      +|...+..+|++|.+|..+....    ..... ...|+|++|++++++.++++|++++.++++.+ ..+.++|.+ .+..
T Consensus        74 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~~~~~-~~~~  151 (319)
T cd08242          74 RVVGEINIACGRCEYCRRGLYTHCPNRTVLGIVDRDGAFAEYLTLPLENLHVVPDLVPDEQAVFA-EPLAAALEI-LEQV  151 (319)
T ss_pred             eEEECCCcCCCCChhhhCcCcccCCCCcccCccCCCCceEEEEEechHHeEECcCCCCHHHhhhh-hHHHHHHHH-HHhc
Confidence            99999999999999997664321    11111 13589999999999999999999999888864 355566665 5778


Q ss_pred             CCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEE
Q 018529          166 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVE  245 (354)
Q Consensus       166 ~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d  245 (354)
                      +++++++|||+|+|.+|.+++|+|+.+|+ +|++++.++++.++++++|++.++++.+.          ...+++|++||
T Consensus       152 ~~~~g~~vlV~g~g~vg~~~~q~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~~----------~~~~~~d~vid  220 (319)
T cd08242         152 PITPGDKVAVLGDGKLGLLIAQVLALTGP-DVVLVGRHSEKLALARRLGVETVLPDEAE----------SEGGGFDVVVE  220 (319)
T ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHcCCcEEeCcccc----------ccCCCCCEEEE
Confidence            89999999999989999999999999999 69999999999999999999887766431          12238999999


Q ss_pred             cccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhh-hccccEEEEEeccCCCCCCCHHHHHHHHHccCCCCCCce
Q 018529          246 CTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFI  324 (354)
Q Consensus       246 ~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  324 (354)
                      ++|+...+..++++++++ |+++..+......  .+.... +.++.++.++..+      .++++++++.++++++.+.+
T Consensus       221 ~~g~~~~~~~~~~~l~~~-g~~v~~~~~~~~~--~~~~~~~~~~~~~i~~~~~~------~~~~~~~~~~~~~l~~~~~~  291 (319)
T cd08242         221 ATGSPSGLELALRLVRPR-GTVVLKSTYAGPA--SFDLTKAVVNEITLVGSRCG------PFAPALRLLRKGLVDVDPLI  291 (319)
T ss_pred             CCCChHHHHHHHHHhhcC-CEEEEEcccCCCC--ccCHHHheecceEEEEEecc------cHHHHHHHHHcCCCChhhce
Confidence            999877889999999997 9999876543222  222222 3477888876532      38889999999988766668


Q ss_pred             eeeeccccHHHHHHHHhcCCceeEEEe
Q 018529          325 THRIPFSEINKAFEYMVKGEGLRCIIS  351 (354)
Q Consensus       325 ~~~~~l~~~~~a~~~~~~~~~~k~vi~  351 (354)
                      .+.|+++++++||+.+.++..+|+||+
T Consensus       292 ~~~~~l~~~~~a~~~~~~~~~~k~vi~  318 (319)
T cd08242         292 TAVYPLEEALEAFERAAEPGALKVLLR  318 (319)
T ss_pred             EEEEeHHHHHHHHHHHhcCCceEEEeC
Confidence            899999999999999987766798875

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=100.00  E-value=1.4e-41  Score=308.89  Aligned_cols=311  Identities=20%  Similarity=0.241  Sum_probs=247.8

Q ss_pred             hcceeeeccCCC-ceEEEEeec----CCCCCCeEEEEEeeeecCccchhhhccCCCC-CCCCcccccce--eEEEEEeCC
Q 018529           10 TCKAAVAWEAGK-PLIIQDVEV----APPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEA--AGVVESVGE   81 (354)
Q Consensus        10 ~~~a~~~~~~~~-~l~~~~~~~----p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~-~~~p~~~G~e~--~G~V~~vG~   81 (354)
                      -+|++....++. .+++.+.++    |+|++|||||||+|+++|+.|+....|.... ..+|+++|+++  .|.+..+|+
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~vlv~v~~~~inp~d~~~~~g~~~~~~~~p~~~g~~~~g~~~~~~v~~   86 (338)
T cd08295           7 ILKAYVTGFPKESDLELRTTKLTLKVPPGGSGDVLVKNLYLSCDPYMRGRMKGHDDSLYLPPFKPGEVITGYGVAKVVDS   86 (338)
T ss_pred             EEecCCCCCCCccceEEEEecCCcCCCCCCCCeEEEEEEEEeeCHHHHHhhccCCccccCCCcCCCCeEeccEEEEEEec
Confidence            356666444443 389999988    7899999999999999999999988774332 35678899754  456666888


Q ss_pred             CCCCCCCCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeec-cceEECC-CCCCcc-chhhcccchhhhh
Q 018529           82 GVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHS-GCVAKIN-PLAPLD-KVCILSCGVSTGL  158 (354)
Q Consensus        82 ~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~-~~~~~~P-~~~~~~-~aa~l~~~~~~a~  158 (354)
                      .+++|++||+|+++                          |+|+||+.+|+ ..++++| +.+++. +++++++++.|||
T Consensus        87 ~v~~~~vGd~V~~~--------------------------g~~aey~~v~~~~~~~~lp~~~~~~~~~aa~l~~~~~tA~  140 (338)
T cd08295          87 GNPDFKVGDLVWGF--------------------------TGWEEYSLIPRGQDLRKIDHTDVPLSYYLGLLGMPGLTAY  140 (338)
T ss_pred             CCCCCCCCCEEEec--------------------------CCceeEEEecchhceeecCCCCCCHHHHHHhcccHHHHHH
Confidence            88899999999854                          58999999999 7999995 678886 7899999999999


Q ss_pred             hhhhhhcCCCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh-cCCceEEcCCCCChhHHHHHHHHc
Q 018529          159 GATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMT  236 (354)
Q Consensus       159 ~~l~~~~~~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~-lg~~~v~~~~~~~~~~~~~i~~~~  236 (354)
                      +++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++.+++++ +|+++++++.+.. ++.+.+++.+
T Consensus       141 ~~l~~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~G~-~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~-~~~~~i~~~~  218 (338)
T cd08295         141 AGFYEVCKPKKGETVFVSAASGAVGQLVGQLAKLKGC-YVVGSAGSDEKVDLLKNKLGFDDAFNYKEEP-DLDAALKRYF  218 (338)
T ss_pred             HHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCceeEEcCCcc-cHHHHHHHhC
Confidence            99878889999999999997 9999999999999999 79999999999999998 9999999865431 2777777776


Q ss_pred             CCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCcee----ecc-hhhhccccEEEEEeccCCCC--CCCHHHH
Q 018529          237 NGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVF----MTK-PINVLNERTLKGTFFGNYKP--RTDLPSV  309 (354)
Q Consensus       237 ~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~----~~~-~~~~~~~~~i~g~~~~~~~~--~~~~~~~  309 (354)
                      ++++|++||++|+ ..+..++++++++ |+++.+|........    ... ...+.+++++.++....+..  .+.++++
T Consensus       219 ~~gvd~v~d~~g~-~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~  296 (338)
T cd08295         219 PNGIDIYFDNVGG-KMLDAVLLNMNLH-GRIAACGMISQYNLEWPEGVRNLLNIIYKRVKIQGFLVGDYLHRYPEFLEEM  296 (338)
T ss_pred             CCCcEEEEECCCH-HHHHHHHHHhccC-cEEEEecccccCCCCCCCCccCHHHHhhccceeeEEEehhhHHHHHHHHHHH
Confidence            5689999999998 7889999999997 999999865421110    011 12234777888865543221  1236778


Q ss_pred             HHHHHccCCCCCCceeeeeccccHHHHHHHHhcCCc-eeEEEec
Q 018529          310 VDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM  352 (354)
Q Consensus       310 ~~~~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~~  352 (354)
                      ++++.++++++.  +...|+++++++|++.+.+++. +|+|+++
T Consensus       297 ~~l~~~g~l~~~--~~~~~~l~~~~~A~~~~~~~~~~GkvVl~~  338 (338)
T cd08295         297 SGYIKEGKLKYV--EDIADGLESAPEAFVGLFTGSNIGKQVVKV  338 (338)
T ss_pred             HHHHHCCCeEce--eecccCHHHHHHHHHHHhcCCCCceEEEEC
Confidence            899999987765  4456999999999999988775 6988864

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=3.8e-41  Score=306.01  Aligned_cols=323  Identities=25%  Similarity=0.412  Sum_probs=266.7

Q ss_pred             ceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCE
Q 018529           12 KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDH   91 (354)
Q Consensus        12 ~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~   91 (354)
                      |++..+..+..+++.+++.|+|.++|++||+.++++|++|+....+......+|.++|||++|+|+++|+++++|++||+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~p~~~~~evlirv~a~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~~Gd~   80 (337)
T cd05283           1 KGYAARDASGKLEPFTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWGPTKYPLVPGHEIVGIVVAVGSKVTKFKVGDR   80 (337)
T ss_pred             CceEEecCCCCceEEeccCCCCCCCeEEEEEEEecccchHHHHhcCCcCCCCCCcccCcceeeEEEEECCCCcccCCCCE
Confidence            57788888877999999999999999999999999999999998876544556889999999999999999999999999


Q ss_pred             EE-ecccCCCCCCcccccCCCC-CCcc----------cccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhh
Q 018529           92 VL-PVFTGECGDCRHCRFSING-EPVN----------HFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLG  159 (354)
Q Consensus        92 V~-~~~~~~~~~c~~c~~~~~~-~~~~----------~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~  159 (354)
                      |+ ......|++|.+|..+... +...          +....|+|+||+.++++.++++|+++++++++.+.+.+.+||+
T Consensus        81 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~  160 (337)
T cd05283          81 VGVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKYPDGTITQGGYADHIVVDERFVFKIPEGLDSAAAAPLLCAGITVYS  160 (337)
T ss_pred             EEEecCCCCCCCCccccCCchhcCcchhhcccccccCCCcCCCcceeEEEechhheEECCCCCCHHHhhhhhhHHHHHHH
Confidence            97 5556689999999754322 1111          1234689999999999999999999999999999999999999


Q ss_pred             hhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCC
Q 018529          160 ATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGG  239 (354)
Q Consensus       160 ~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~  239 (354)
                      ++. ...+++|++++|.|+|.+|++++++|+.+|+ +|+++++++++.++++++|++.+++..+.+  +.+   . ..++
T Consensus       161 ~~~-~~~~~~g~~vlV~g~g~vG~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~--~~~---~-~~~~  232 (337)
T cd05283         161 PLK-RNGVGPGKRVGVVGIGGLGHLAVKFAKALGA-EVTAFSRSPSKKEDALKLGADEFIATKDPE--AMK---K-AAGS  232 (337)
T ss_pred             HHH-hcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHcCCcEEecCcchh--hhh---h-ccCC
Confidence            864 4568999999998889999999999999999 899999999999999999998888765532  221   1 2348


Q ss_pred             ccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhh-hccccEEEEEeccCCCCCCCHHHHHHHHHccCC
Q 018529          240 VDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQL  318 (354)
Q Consensus       240 ~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~  318 (354)
                      +|++||++|.......++++++++ |+++.+|......  .++... +.+++++.+++....   ++++++++++.++++
T Consensus       233 ~d~v~~~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~--~~~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~~~~~~l  306 (337)
T cd05283         233 LDLIIDTVSASHDLDPYLSLLKPG-GTLVLVGAPEEPL--PVPPFPLIFGRKSVAGSLIGGR---KETQEMLDFAAEHGI  306 (337)
T ss_pred             ceEEEECCCCcchHHHHHHHhcCC-CEEEEEeccCCCC--ccCHHHHhcCceEEEEecccCH---HHHHHHHHHHHhCCC
Confidence            999999999855689999999997 9999998764322  233333 348999999876432   578899999999976


Q ss_pred             CCCCceeeeeccccHHHHHHHHhcCCc-eeEEEe
Q 018529          319 ELEKFITHRIPFSEINKAFEYMVKGEG-LRCIIS  351 (354)
Q Consensus       319 ~~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~  351 (354)
                      ++  . .+.|+++++++||+.+.+++. +|+|++
T Consensus       307 ~~--~-~~~~~~~~~~~a~~~~~~~~~~~k~v~~  337 (337)
T cd05283         307 KP--W-VEVIPMDGINEALERLEKGDVRYRFVLD  337 (337)
T ss_pred             cc--c-eEEEEHHHHHHHHHHHHcCCCcceEeeC
Confidence            54  3 378999999999999998886 688764

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic

>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional

Probab=100.00  E-value=7.1e-41  Score=304.59  Aligned_cols=328  Identities=25%  Similarity=0.368  Sum_probs=263.6

Q ss_pred             cceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 018529           11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD   90 (354)
Q Consensus        11 ~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd   90 (354)
                      |||+++.+++....+++.|.|++.++||+|||.++++|++|+....+..+. ..|.++|||++|+|+++|++++.|++||
T Consensus         1 mka~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~d~~~~~g~~~~-~~~~~~g~e~~G~V~~~G~~v~~~~~Gd   79 (338)
T PRK09422          1 MKAAVVNKDHTGDVVVEKTLRPLKHGEALVKMEYCGVCHTDLHVANGDFGD-KTGRILGHEGIGIVKEVGPGVTSLKVGD   79 (338)
T ss_pred             CeEEEecCCCCCceEEEecCCCCCCCeEEEEEEEEeechhHHHHHcCCCCC-CCCccCCcccceEEEEECCCCccCCCCC
Confidence            789999998874448999999999999999999999999999888775432 2367899999999999999999999999


Q ss_pred             EEEecc-cCCCCCCcccccCCC-CCCcc---cccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhc
Q 018529           91 HVLPVF-TGECGDCRHCRFSIN-GEPVN---HFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVA  165 (354)
Q Consensus        91 ~V~~~~-~~~~~~c~~c~~~~~-~~~~~---~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~  165 (354)
                      +|++.+ ..+|+.|.+|..+.. .|..+   +....|+|++|+.++.+.++++|+++++.+++.+++++.+||+++ ..+
T Consensus        80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~~-~~~  158 (338)
T PRK09422         80 RVSIAWFFEGCGHCEYCTTGRETLCRSVKNAGYTVDGGMAEQCIVTADYAVKVPEGLDPAQASSITCAGVTTYKAI-KVS  158 (338)
T ss_pred             EEEEccCCCCCCCChhhcCCCcccCCCccccCccccCcceeEEEEchHHeEeCCCCCCHHHeehhhcchhHHHHHH-Hhc
Confidence            998654 457999999854322 22222   122358999999999999999999999999999999999999996 778


Q ss_pred             CCCCCCeEEEEcCChhHHHHHHHHHH-cCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEE
Q 018529          166 KPERGSSVAVFGLGAVGLAAAEGARI-AGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSV  244 (354)
Q Consensus       166 ~~~~~~~vlI~G~g~~G~~a~~~a~~-~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~  244 (354)
                      .++++++|||+|+|++|++++++|+. .|+ +|+++++++++.++++++|++.++++...+ ++.+.+++.++ ++|+++
T Consensus       159 ~~~~g~~vlV~g~g~vG~~~~~la~~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~-~~~~~v~~~~~-~~d~vi  235 (338)
T PRK09422        159 GIKPGQWIAIYGAGGLGNLALQYAKNVFNA-KVIAVDINDDKLALAKEVGADLTINSKRVE-DVAKIIQEKTG-GAHAAV  235 (338)
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHHhCCC-eEEEEeCChHHHHHHHHcCCcEEecccccc-cHHHHHHHhcC-CCcEEE
Confidence            89999999999999999999999998 499 899999999999999999998888875411 26667777665 688665


Q ss_pred             EcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchh-hhccccEEEEEeccCCCCCCCHHHHHHHHHccCCCCCCc
Q 018529          245 ECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI-NVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKF  323 (354)
Q Consensus       245 d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~-~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  323 (354)
                      ++.++...++.++++++.+ |+++.+|......  ..... ...+..++.++....   +++++.+++++.++++..  .
T Consensus       236 ~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~g~l~~--~  307 (338)
T PRK09422        236 VTAVAKAAFNQAVDAVRAG-GRVVAVGLPPESM--DLSIPRLVLDGIEVVGSLVGT---RQDLEEAFQFGAEGKVVP--K  307 (338)
T ss_pred             EeCCCHHHHHHHHHhccCC-CEEEEEeeCCCCc--eecHHHHhhcCcEEEEecCCC---HHHHHHHHHHHHhCCCCc--c
Confidence            5555668899999999997 9999998654222  22222 223677777755322   246888999999997654  3


Q ss_pred             eeeeeccccHHHHHHHHhcCCc-eeEEEec
Q 018529          324 ITHRIPFSEINKAFEYMVKGEG-LRCIISM  352 (354)
Q Consensus       324 v~~~~~l~~~~~a~~~~~~~~~-~k~vi~~  352 (354)
                      + +.++++++++|++.+.+++. +|+++++
T Consensus       308 v-~~~~~~~~~~a~~~~~~~~~~gkvvv~~  336 (338)
T PRK09422        308 V-QLRPLEDINDIFDEMEQGKIQGRMVIDF  336 (338)
T ss_pred             E-EEEcHHHHHHHHHHHHcCCccceEEEec
Confidence            4 46899999999999988776 5888765

>PRK13771 putative alcohol dehydrogenase; Provisional

Probab=100.00  E-value=3.9e-41  Score=305.78  Aligned_cols=325  Identities=24%  Similarity=0.363  Sum_probs=268.4

Q ss_pred             cceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 018529           11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD   90 (354)
Q Consensus        11 ~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd   90 (354)
                      |||+++.++++++++++.+.|.+.++|++||+.++++|++|+....+..+...+|.++|||++|+|+.+|++++.+++||
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~G~   80 (334)
T PRK13771          1 MKAVILPGFKQGYRIEEVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYPRMKYPVILGHEVVGTVEEVGENVKGFKPGD   80 (334)
T ss_pred             CeeEEEcCCCCCcEEEeCCCCCCCCCeEEEEEEEEeechhhHHHhcCCCCCCCCCeeccccceEEEEEeCCCCccCCCCC
Confidence            78999999998899999999999999999999999999999988877655556678999999999999999998899999


Q ss_pred             EEEecccCCCCCCcccccCCCC-CCcc---cccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhcC
Q 018529           91 HVLPVFTGECGDCRHCRFSING-EPVN---HFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK  166 (354)
Q Consensus        91 ~V~~~~~~~~~~c~~c~~~~~~-~~~~---~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~~  166 (354)
                      +|++.+..+|+.|.+|..+..+ |...   +....|+|++|+.++.+.++++|+++++.+++.+++.+.++|+++... .
T Consensus        81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~l~~~~~~a~~~~~~~-~  159 (334)
T PRK13771         81 RVASLLYAPDGTCEYCRSGEEAYCKNRLGYGEELDGFFAEYAKVKVTSLVKVPPNVSDEGAVIVPCVTGMVYRGLRRA-G  159 (334)
T ss_pred             EEEECCCCCCcCChhhcCCCcccCccccccccccCceeeeeeecchhceEECCCCCCHHHhhcccchHHHHHHHHHhc-C
Confidence            9999988999999999755422 2221   112258999999999999999999999999999999999999987555 8


Q ss_pred             CCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEE
Q 018529          167 PERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVE  245 (354)
Q Consensus       167 ~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d  245 (354)
                      ++++++|+|+|+ |.+|++++++|+..|+ +++++++++++.+.++++ ++.+++..    .+.+.++++  +++|++||
T Consensus       160 ~~~~~~vlI~g~~g~~g~~~~~la~~~g~-~vi~~~~~~~~~~~~~~~-~~~~~~~~----~~~~~v~~~--~~~d~~ld  231 (334)
T PRK13771        160 VKKGETVLVTGAGGGVGIHAIQVAKALGA-KVIAVTSSESKAKIVSKY-ADYVIVGS----KFSEEVKKI--GGADIVIE  231 (334)
T ss_pred             CCCCCEEEEECCCccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHH-HHHhcCch----hHHHHHHhc--CCCcEEEE
Confidence            999999999998 9999999999999999 889898999999999888 66666554    255566665  37999999


Q ss_pred             cccChHhHHHHHHHhhCCCceEEEEcCCCCCce--eecchhhhccccEEEEEeccCCCCCCCHHHHHHHHHccCCCCCCc
Q 018529          246 CTGNIDNMISAFECVHDGWGVAVLVGVPSKDAV--FMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKF  323 (354)
Q Consensus       246 ~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~--~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  323 (354)
                      ++|+ .....++++++++ |+++.+|.......  ..+... +.+++++.+...   ..+++++++++++.++.++.  .
T Consensus       232 ~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~--~  303 (334)
T PRK13771        232 TVGT-PTLEESLRSLNMG-GKIIQIGNVDPSPTYSLRLGYI-ILKDIEIIGHIS---ATKRDVEEALKLVAEGKIKP--V  303 (334)
T ss_pred             cCCh-HHHHHHHHHHhcC-CEEEEEeccCCCCCcccCHHHH-HhcccEEEEecC---CCHHHHHHHHHHHHcCCCcc--e
Confidence            9998 5788999999997 99999987543222  112222 347888887642   23457889999999997653  3


Q ss_pred             eeeeeccccHHHHHHHHhcCCc-eeEEEec
Q 018529          324 ITHRIPFSEINKAFEYMVKGEG-LRCIISM  352 (354)
Q Consensus       324 v~~~~~l~~~~~a~~~~~~~~~-~k~vi~~  352 (354)
                      +.+.|+++++++||+.+.+++. +|+++..
T Consensus       304 ~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~  333 (334)
T PRK13771        304 IGAEVSLSEIDKALEELKDKSRIGKILVKP  333 (334)
T ss_pred             EeeeEcHHHHHHHHHHHHcCCCcceEEEec
Confidence            6789999999999999987664 6888764

>cd05285 sorbitol_DH Sorbitol dehydrogenase

Probab=100.00  E-value=1e-40  Score=303.96  Aligned_cols=328  Identities=29%  Similarity=0.481  Sum_probs=265.0

Q ss_pred             eeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCC-CC--CCCCcccccceeEEEEEeCCCCCCCCCC
Q 018529           13 AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKG-QT--PLFPRIFGHEAAGVVESVGEGVSDLEVG   89 (354)
Q Consensus        13 a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~-~~--~~~p~~~G~e~~G~V~~vG~~~~~~~~G   89 (354)
                      |.++++++. +++.+.+.|.+.++||+|||.++++|+.|+..+.+.. ..  ...|.++|+|++|+|+++|+++++|++|
T Consensus         1 ~~~~~~~~~-~~~~~~~~~~l~~~~vlV~v~~~~l~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~G   79 (343)
T cd05285           1 AAVLHGPGD-LRLEERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHESAGTVVAVGSGVTHLKVG   79 (343)
T ss_pred             CceEecCCc-eeEEECCCCCCCCCeEEEEEEEeeEccccHHHHccCCCcccCCCCCcccCcceeEEEEeeCCCCCCCCCC
Confidence            456777755 9999999999999999999999999999988764321 11  1346789999999999999999999999


Q ss_pred             CEEEecccCCCCCCcccccCCCCCCcc-cc----cccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhh
Q 018529           90 DHVLPVFTGECGDCRHCRFSINGEPVN-HF----LGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNV  164 (354)
Q Consensus        90 d~V~~~~~~~~~~c~~c~~~~~~~~~~-~~----~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~  164 (354)
                      |+|++.+..+|++|.+|..+..+.+.. .+    ...|+|++|+.++++.++++|+++++++++.+ .++.+||+++ ..
T Consensus        80 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~~-~~  157 (343)
T cd05285          80 DRVAIEPGVPCRTCEFCKSGRYNLCPDMRFAATPPVDGTLCRYVNHPADFCHKLPDNVSLEEGALV-EPLSVGVHAC-RR  157 (343)
T ss_pred             CEEEEccccCCCCChhHhCcCcccCcCccccccccCCCceeeeEEecHHHcEECcCCCCHHHhhhh-hHHHHHHHHH-Hh
Confidence            999999999999999997654332111 11    13589999999999999999999999999877 5888999985 78


Q ss_pred             cCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCC-hhHHHHHHHHcCC-CccE
Q 018529          165 AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHD-RPIQEVIAEMTNG-GVDR  242 (354)
Q Consensus       165 ~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~-~~~~~~i~~~~~~-~~dv  242 (354)
                      ++++++++|||+|+|.+|++++|+|+.+|++.|+++++++++.++++++|++.++++.+.+ ..+.+.+.+.+.+ ++|+
T Consensus       158 ~~~~~g~~vlI~g~g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~d~  237 (343)
T cd05285         158 AGVRPGDTVLVFGAGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAKELGATHTVNVRTEDTPESAEKIAELLGGKGPDV  237 (343)
T ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEeccccccchhHHHHHHHHhCCCCCCE
Confidence            9999999999998899999999999999995489999999999999999999998877654 1136677777776 8999


Q ss_pred             EEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchh-hhccccEEEEEeccCCCCCCCHHHHHHHHHccCCCCC
Q 018529          243 SVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI-NVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELE  321 (354)
Q Consensus       243 v~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~-~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  321 (354)
                      +|||.|+...+..++++++++ |+++.+|.....  ..++.. ...+++++.++...    .+.+.++++++.++++.+.
T Consensus       238 vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~~l~~~  310 (343)
T cd05285         238 VIECTGAESCIQTAIYATRPG-GTVVLVGMGKPE--VTLPLSAASLREIDIRGVFRY----ANTYPTAIELLASGKVDVK  310 (343)
T ss_pred             EEECCCCHHHHHHHHHHhhcC-CEEEEEccCCCC--CccCHHHHhhCCcEEEEeccC----hHHHHHHHHHHHcCCCCch
Confidence            999999866889999999997 999999865422  122221 23367777765432    2568889999999977654


Q ss_pred             CceeeeeccccHHHHHHHHhcCC-c-eeEEE
Q 018529          322 KFITHRIPFSEINKAFEYMVKGE-G-LRCII  350 (354)
Q Consensus       322 ~~v~~~~~l~~~~~a~~~~~~~~-~-~k~vi  350 (354)
                      +.+.+.|+++++.+|++.+.+++ . +|++|
T Consensus       311 ~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~  341 (343)
T cd05285         311 PLITHRFPLEDAVEAFETAAKGKKGVIKVVI  341 (343)
T ss_pred             HhEEEEEeHHHHHHHHHHHHcCCCCeeEEEE
Confidence            55678899999999999998875 3 78887

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

Probab=100.00  E-value=1.3e-40  Score=302.93  Aligned_cols=330  Identities=28%  Similarity=0.419  Sum_probs=273.8

Q ss_pred             cceeeeccCCCc-eEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCC-CCCCCcccccceeEEEEEeCCCCCCCCC
Q 018529           11 CKAAVAWEAGKP-LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ-TPLFPRIFGHEAAGVVESVGEGVSDLEV   88 (354)
Q Consensus        11 ~~a~~~~~~~~~-l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~-~~~~p~~~G~e~~G~V~~vG~~~~~~~~   88 (354)
                      ||++++..++++ +.+.+.+.|.+++++|+|++.++++|+.|+....+..+ ....|.++|+|++|+|+.+|++++++++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~g~~~~G~v~~~G~~v~~~~~   80 (338)
T cd08254           1 MKAWRFHKGSKGLLVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVPTLTKLPLTLGHEIAGTVVEVGAGVTNFKV   80 (338)
T ss_pred             CeeEEEecCCCCceEEeccCCCCCCCCeEEEEEEEEeeccHhHHHHcCCCcccCCCCEeccccccEEEEEECCCCccCCC
Confidence            799999999987 67888888889999999999999999999998877554 2345788999999999999999999999


Q ss_pred             CCEEEecccCCCCCCcccccCCCCCC----cccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhh
Q 018529           89 GDHVLPVFTGECGDCRHCRFSINGEP----VNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNV  164 (354)
Q Consensus        89 Gd~V~~~~~~~~~~c~~c~~~~~~~~----~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~  164 (354)
                      ||+|++.+..+|+.|.+|..+.....    ..+....|+|++|+.++.+.++++|+++++.+++.++.++++||+++...
T Consensus        81 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~ta~~~l~~~  160 (338)
T cd08254          81 GDRVAVPAVIPCGACALCRRGRGNLCLNQGMPGLGIDGGFAEYIVVPARALVPVPDGVPFAQAAVATDAVLTPYHAVVRA  160 (338)
T ss_pred             CCEEEECCCCCCCCChhhhCcCcccCCCCCccccccCCcceeeEEechHHeEECCCCCCHHHhhhhcchHHHHHHHHHhc
Confidence            99999999999999999965543211    11233458999999999999999999999999999999999999998778


Q ss_pred             cCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC-CccEE
Q 018529          165 AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRS  243 (354)
Q Consensus       165 ~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~~dvv  243 (354)
                      ..++++++|||.|+|.+|++++++|+..|. +|+++++++++.+.++++|++.+++..+..  +.+.+ ....+ ++|++
T Consensus       161 ~~~~~~~~vli~g~g~vG~~~~~la~~~G~-~V~~~~~s~~~~~~~~~~g~~~~~~~~~~~--~~~~~-~~~~~~~~D~v  236 (338)
T cd08254         161 GEVKPGETVLVIGLGGLGLNAVQIAKAMGA-AVIAVDIKEEKLELAKELGADEVLNSLDDS--PKDKK-AAGLGGGFDVI  236 (338)
T ss_pred             cCCCCCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHhCCCEEEcCCCcC--HHHHH-HHhcCCCceEE
Confidence            889999999999889999999999999999 799999999999999999998888776544  55555 44444 89999


Q ss_pred             EEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhhccccEEEEEeccCCCCCCCHHHHHHHHHccCCCCCCc
Q 018529          244 VECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKF  323 (354)
Q Consensus       244 ~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  323 (354)
                      +|++|....++.++++|+++ |+++.++.......+.. ...+.++.++.+++..   ..+.+..+++++.++.+.+.  
T Consensus       237 id~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~---~~~~~~~~~~ll~~~~l~~~--  309 (338)
T cd08254         237 FDFVGTQPTFEDAQKAVKPG-GRIVVVGLGRDKLTVDL-SDLIARELRIIGSFGG---TPEDLPEVLDLIAKGKLDPQ--  309 (338)
T ss_pred             EECCCCHHHHHHHHHHhhcC-CEEEEECCCCCCCccCH-HHHhhCccEEEEeccC---CHHHHHHHHHHHHcCCCccc--
Confidence            99998878899999999997 99999986543222222 1223377788876532   23568889999999977754  


Q ss_pred             eeeeeccccHHHHHHHHhcCCc-eeEEEec
Q 018529          324 ITHRIPFSEINKAFEYMVKGEG-LRCIISM  352 (354)
Q Consensus       324 v~~~~~l~~~~~a~~~~~~~~~-~k~vi~~  352 (354)
                       .+.++++++.++++.+.+++. +|+|+++
T Consensus       310 -~~~~~~~~~~~a~~~~~~~~~~~kvv~~~  338 (338)
T cd08254         310 -VETRPLDEIPEVLERLHKGKVKGRVVLVP  338 (338)
T ss_pred             -ceeEcHHHHHHHHHHHHcCCccceEEEeC
Confidence             478999999999999988775 5888764

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio

>cd05281 TDH Threonine dehydrogenase

Probab=100.00  E-value=1.8e-40  Score=302.18  Aligned_cols=332  Identities=30%  Similarity=0.419  Sum_probs=265.7

Q ss_pred             cceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCC---CCCCCCcccccceeEEEEEeCCCCCCCC
Q 018529           11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKG---QTPLFPRIFGHEAAGVVESVGEGVSDLE   87 (354)
Q Consensus        11 ~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~---~~~~~p~~~G~e~~G~V~~vG~~~~~~~   87 (354)
                      |||++++.++..+++.+.+.|.|.++|++||+.++++|+.|+..+.+..   ....+|.++|||++|+|+.+|++++.++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~   80 (341)
T cd05281           1 MKAIVKTKAGPGAELVEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEVGEGVTRVK   80 (341)
T ss_pred             CcceEEecCCCceEEEeCCCCCCCCCeEEEEEEEEEEcccchHHHcCCCCccccCCCCcccccceEEEEEEECCCCCCCC
Confidence            6899999888779999999999999999999999999999988754421   2234577899999999999999999999


Q ss_pred             CCCEEEecccCCCCCCcccccCCCCC----CcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhh
Q 018529           88 VGDHVLPVFTGECGDCRHCRFSINGE----PVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLN  163 (354)
Q Consensus        88 ~Gd~V~~~~~~~~~~c~~c~~~~~~~----~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~  163 (354)
                      +||+|++.+..+|+.|.+|..+....    ...+....|+|++|++++.+.++++|++++++. +++..++.++++++. 
T Consensus        81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~lP~~~~~~~-a~~~~~~~~a~~~~~-  158 (341)
T cd05281          81 VGDYVSAETHIVCGKCYQCRTGNYHVCQNTKILGVDTDGCFAEYVVVPEENLWKNDKDIPPEI-ASIQEPLGNAVHTVL-  158 (341)
T ss_pred             CCCEEEECCccCCCCChHHHCcCcccCcccceEeccCCCcceEEEEechHHcEECcCCCCHHH-hhhhhHHHHHHHHHH-
Confidence            99999999999999999986443221    111122458999999999999999999999854 456667888888753 


Q ss_pred             hcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC-CccE
Q 018529          164 VAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDR  242 (354)
Q Consensus       164 ~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~~dv  242 (354)
                       ...++|++|||.|+|.+|++++|+|+..|..+|+++++++++.+.++++|+++++++.+.+  +. .+.++..+ ++|+
T Consensus       159 -~~~~~g~~vlV~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~-~~~~~~~~~~vd~  234 (341)
T cd05281         159 -AGDVSGKSVLITGCGPIGLMAIAVAKAAGASLVIASDPNPYRLELAKKMGADVVINPREED--VV-EVKSVTDGTGVDV  234 (341)
T ss_pred             -hcCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCcceeeCccccc--HH-HHHHHcCCCCCCE
Confidence             4568999999998899999999999999986688888899999999999998888776554  66 77777776 9999


Q ss_pred             EEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhhccccEEEEEeccCCCCCCCHHHHHHHHHccCCCCCC
Q 018529          243 SVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEK  322 (354)
Q Consensus       243 v~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  322 (354)
                      +||++|+......++++|+++ |+++.+|.........+......+++.+.+...  ....+.+.++++++.++.+.+.+
T Consensus       235 vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~  311 (341)
T cd05281         235 VLEMSGNPKAIEQGLKALTPG-GRVSILGLPPGPVDIDLNNLVIFKGLTVQGITG--RKMFETWYQVSALLKSGKVDLSP  311 (341)
T ss_pred             EEECCCCHHHHHHHHHHhccC-CEEEEEccCCCCcccccchhhhccceEEEEEec--CCcchhHHHHHHHHHcCCCChhH
Confidence            999999877889999999997 999999865432222222223446777776552  12234678899999999887655


Q ss_pred             ceeeeeccccHHHHHHHHhcCCceeEEEe
Q 018529          323 FITHRIPFSEINKAFEYMVKGEGLRCIIS  351 (354)
Q Consensus       323 ~v~~~~~l~~~~~a~~~~~~~~~~k~vi~  351 (354)
                      .+...++++++++||+.+.+++.+|+|++
T Consensus       312 ~~~~~~~~~~~~~a~~~~~~~~~gk~vv~  340 (341)
T cd05281         312 VITHKLPLEDFEEAFELMRSGKCGKVVLY  340 (341)
T ss_pred             heEEEecHHHHHHHHHHHhcCCCceEEec
Confidence            57788999999999999988775688875

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases

Probab=100.00  E-value=3.7e-40  Score=300.42  Aligned_cols=332  Identities=29%  Similarity=0.452  Sum_probs=269.8

Q ss_pred             cceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 018529           11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD   90 (354)
Q Consensus        11 ~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd   90 (354)
                      |||+++.+.++ +++++.+.|+++++||+||+.++++|+.|+....+.. ....|.++|+|++|+|+.+|++++.|++||
T Consensus         1 ~~a~~~~~~~~-l~~~~~~~~~l~~~~v~v~v~~~~~n~~d~~~~~~~~-~~~~~~~~g~~~~G~V~~~g~~v~~~~~Gd   78 (343)
T cd08236           1 MKALVLTGPGD-LRYEDIPKPEPGPGEVLVKVKACGICGSDIPRYLGTG-AYHPPLVLGHEFSGTVEEVGSGVDDLAVGD   78 (343)
T ss_pred             CeeEEEecCCc-eeEEecCCCCCCCCeEEEEEEEEEECccchHhhcCCC-CCCCCcccCcceEEEEEEECCCCCcCCCCC
Confidence            78999998876 9999999999999999999999999999998877654 234578899999999999999999999999


Q ss_pred             EEEecccCCCCCCcccccCCCCCC----cccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhcC
Q 018529           91 HVLPVFTGECGDCRHCRFSINGEP----VNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK  166 (354)
Q Consensus        91 ~V~~~~~~~~~~c~~c~~~~~~~~----~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~~  166 (354)
                      +|++.+...|++|.+|..+..+.+    ..+....|+|++|+.+|++.++++|+++++++++++ ..+++||+++. ...
T Consensus        79 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~ta~~~l~-~~~  156 (343)
T cd08236          79 RVAVNPLLPCGKCEYCKKGEYSLCSNYDYIGSRRDGAFAEYVSVPARNLIKIPDHVDYEEAAMI-EPAAVALHAVR-LAG  156 (343)
T ss_pred             EEEEcCCCCCCCChhHHCcChhhCCCcceEecccCCcccceEEechHHeEECcCCCCHHHHHhc-chHHHHHHHHH-hcC
Confidence            999999999999999976654322    122224589999999999999999999999999888 58889999874 778


Q ss_pred             CCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC-CccEEEE
Q 018529          167 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVE  245 (354)
Q Consensus       167 ~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~~dvv~d  245 (354)
                      ++++++|||+|+|.+|.+++|+|+.+|++.|+++++++++.++++++|++.++++.+..   .+++.+..++ ++|++||
T Consensus       157 ~~~~~~vlI~g~g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l~~~g~~~~~~~~~~~---~~~~~~~~~~~~~d~vld  233 (343)
T cd08236         157 ITLGDTVVVIGAGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVARELGADDTINPKEED---VEKVRELTEGRGADLVIE  233 (343)
T ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEecCcccc---HHHHHHHhCCCCCCEEEE
Confidence            99999999998899999999999999995599999999999999999998888876542   4556666666 7999999


Q ss_pred             cccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecc-h-hhhccccEEEEEeccCCC--CCCCHHHHHHHHHccCCCCC
Q 018529          246 CTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTK-P-INVLNERTLKGTFFGNYK--PRTDLPSVVDMYMNKQLELE  321 (354)
Q Consensus       246 ~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~-~-~~~~~~~~i~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~  321 (354)
                      |.|....+..++++|+++ |+++.+|........... . ..+.++.++.++......  .++.++++++++.++++.+.
T Consensus       234 ~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  312 (343)
T cd08236         234 AAGSPATIEQALALARPG-GKVVLVGIPYGDVTLSEEAFEKILRKELTIQGSWNSYSAPFPGDEWRTALDLLASGKIKVE  312 (343)
T ss_pred             CCCCHHHHHHHHHHhhcC-CEEEEEcccCCCcccccCCHHHHHhcCcEEEEEeeccccccchhhHHHHHHHHHcCCCChH
Confidence            998867889999999997 999999865432111111 1 112478888887653221  13568889999999987644


Q ss_pred             CceeeeeccccHHHHHHHHhc-CCc-eeEEE
Q 018529          322 KFITHRIPFSEINKAFEYMVK-GEG-LRCII  350 (354)
Q Consensus       322 ~~v~~~~~l~~~~~a~~~~~~-~~~-~k~vi  350 (354)
                      +.+.+.+++++++++++.+.+ ++. +|+|+
T Consensus       313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~k~v~  343 (343)
T cd08236         313 PLITHRLPLEDGPAAFERLADREEFSGKVLL  343 (343)
T ss_pred             HheeeeecHHHHHHHHHHHHcCCCCeeEEeC
Confidence            446788999999999999988 444 57664

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast

>cd08293 PTGR2 Prostaglandin reductase

Probab=100.00  E-value=2.4e-40  Score=301.88  Aligned_cols=299  Identities=18%  Similarity=0.228  Sum_probs=231.7

Q ss_pred             eEEEEeecCCC-CCCeEEEEEeeeecCccchhhhc---cCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCEEEecccC
Q 018529           23 LIIQDVEVAPP-QAMEVRIKIKYTSLCRTDLYFWE---SKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTG   98 (354)
Q Consensus        23 l~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~---~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~   98 (354)
                      +++.+.+.|+| ++|||||||.|+|||+.|.....   +......+|.++|||++|+|+++|+++++|++||+|++.   
T Consensus        23 ~~~~~~~~p~~~~~~evlV~v~a~gin~~d~~~~~~~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~---   99 (345)
T cd08293          23 FRVEECTLPDELNEGQVLVRTLYLSVDPYMRCRMNEDTGTDYLAPWQLSQVLDGGGVGVVEESKHQKFAVGDIVTSF---   99 (345)
T ss_pred             eEEEeccCCCCCCCCeEEEEEEEEecCHHHHhhcccccccccCCCccCCCceEeeEEEEEeccCCCCCCCCCEEEec---
Confidence            88899999987 49999999999999999864322   111123467899999999999999999999999999853   


Q ss_pred             CCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccc----hhhcccchhhhhhhhhhhcCCCCC--Ce
Q 018529           99 ECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDK----VCILSCGVSTGLGATLNVAKPERG--SS  172 (354)
Q Consensus        99 ~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~----aa~l~~~~~~a~~~l~~~~~~~~~--~~  172 (354)
                                           + ++|+||+.++++.++++|+++++.+    ++.++.++.+||+++.+.+++++|  ++
T Consensus       100 ---------------------~-~~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~~~  157 (345)
T cd08293         100 ---------------------N-WPWQTYAVLDGSSLEKVDPQLVDGHLSYFLGAVGLPGLTALIGIQEKGHITPGANQT  157 (345)
T ss_pred             ---------------------C-CCceeEEEecHHHeEEcCccccccchhHHhhhcCcHHHHHHHHHHHhccCCCCCCCE
Confidence                                 1 4799999999999999999865433    445677899999998778888877  99


Q ss_pred             EEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh-cCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcccCh
Q 018529          173 VAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI  250 (354)
Q Consensus       173 vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~-lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~~  250 (354)
                      |||+|+ |++|++++|+|+++|+.+|+++++++++.+++++ +|++.++++.+.+  +.+.+++++++++|++||++|+ 
T Consensus       158 VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~~~--~~~~i~~~~~~gvd~vid~~g~-  234 (345)
T cd08293         158 MVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKTDN--VAERLRELCPEGVDVYFDNVGG-  234 (345)
T ss_pred             EEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCCCC--HHHHHHHHCCCCceEEEECCCc-
Confidence            999987 9999999999999998679999999999999876 9999999887755  8888888876689999999998 


Q ss_pred             HhHHHHHHHhhCCCceEEEEcCCCC---Ccee--ecc--hhhhc--cccEEEEEeccCCCC--CCCHHHHHHHHHccCCC
Q 018529          251 DNMISAFECVHDGWGVAVLVGVPSK---DAVF--MTK--PINVL--NERTLKGTFFGNYKP--RTDLPSVVDMYMNKQLE  319 (354)
Q Consensus       251 ~~~~~~~~~l~~~~g~~v~~g~~~~---~~~~--~~~--~~~~~--~~~~i~g~~~~~~~~--~~~~~~~~~~~~~~~~~  319 (354)
                      ..+..++++++++ |+++.+|....   +...  ...  ...+.  +++++.++....+..  .+.++++++++.+++++
T Consensus       235 ~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~  313 (345)
T cd08293         235 EISDTVISQMNEN-SHIILCGQISQYNKDVPYPPPLPEATEAILKERNITRERFLVLNYKDKFEEAIAQLSQWVKEGKLK  313 (345)
T ss_pred             HHHHHHHHHhccC-CEEEEEeeeecccCccCccccccchhHHHhhhcceEEEEEEeeccHhHHHHHHHHHHHHHHCCCcc
Confidence            4679999999997 99999985321   0010  111  01112  333433332211111  12356778899999877


Q ss_pred             CCCceeeeeccccHHHHHHHHhcCCc-eeEEEec
Q 018529          320 LEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM  352 (354)
Q Consensus       320 ~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~~  352 (354)
                      +.  ....++++++++|++.+.+++. +|+|+++
T Consensus       314 ~~--~~~~~~l~~~~~A~~~~~~~~~~gkvvl~~  345 (345)
T cd08293         314 VK--ETVYEGLENAGEAFQSMMNGGNIGKQIVKV  345 (345)
T ss_pred             ce--eEEeecHHHHHHHHHHHhcCCCCCeEEEEC
Confidence            65  3455699999999999988775 6998864

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=100.00  E-value=1.1e-40  Score=302.24  Aligned_cols=304  Identities=22%  Similarity=0.266  Sum_probs=244.6

Q ss_pred             hcceeeeccC--CCc----eEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCC
Q 018529           10 TCKAAVAWEA--GKP----LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGV   83 (354)
Q Consensus        10 ~~~a~~~~~~--~~~----l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~   83 (354)
                      +|||+++.++  +.+    +++.+.+.|+|++|||+|||.++++|+.|.....   ....+|.++|+|++|+|++   .+
T Consensus         2 ~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~a~~in~~~~~~~~---~~~~~p~v~G~e~~G~V~~---~~   75 (329)
T cd08294           2 KAKTWVLKKHFDGKPKESDFELVEEELPPLKDGEVLCEALFLSVDPYMRPYSK---RLNEGDTMIGTQVAKVIES---KN   75 (329)
T ss_pred             CceEEEEecCCCCCCCccceEEEecCCCCCCCCcEEEEEEEEecCHHHhcccc---cCCCCCcEecceEEEEEec---CC
Confidence            6899999883  333    8899999999999999999999999988755221   1124588999999999985   44


Q ss_pred             CCCCCCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeecc---ceEECCCCCC--c---cchhhcccchh
Q 018529           84 SDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSG---CVAKINPLAP--L---DKVCILSCGVS  155 (354)
Q Consensus        84 ~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~---~~~~~P~~~~--~---~~aa~l~~~~~  155 (354)
                      ++|++||+|++.                          ++|++|+.++.+   .++++|++++  +   ..+++++++++
T Consensus        76 ~~~~~Gd~V~~~--------------------------~~~~~~~~~~~~~~~~~~~iP~~~~~~~~~~~~~a~~~~~~~  129 (329)
T cd08294          76 SKFPVGTIVVAS--------------------------FGWRTHTVSDGKDQPDLYKLPADLPDDLPPSLALGVLGMPGL  129 (329)
T ss_pred             CCCCCCCEEEee--------------------------CCeeeEEEECCccccceEECCccccccCChHHHHHhcccHHH
Confidence            679999999853                          478999999999   9999999998  2   23346788999


Q ss_pred             hhhhhhhhhcCCCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHH
Q 018529          156 TGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAE  234 (354)
Q Consensus       156 ~a~~~l~~~~~~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~  234 (354)
                      |||+++.+..++++|++|||+|+ |++|.+++|+|+.+|+ +|+++++++++.++++++|++.++++.+.+  +.+.+++
T Consensus       130 ta~~al~~~~~~~~g~~vlI~ga~g~vG~~aiqlA~~~G~-~vi~~~~s~~~~~~l~~~Ga~~vi~~~~~~--~~~~v~~  206 (329)
T cd08294         130 TAYFGLLEICKPKAGETVVVNGAAGAVGSLVGQIAKIKGC-KVIGCAGSDDKVAWLKELGFDAVFNYKTVS--LEEALKE  206 (329)
T ss_pred             HHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEeCCCcc--HHHHHHH
Confidence            99999878899999999999986 9999999999999999 899999999999999999999999987665  7788888


Q ss_pred             HcCCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCce--e---e-cchhhhccccEEEEEeccCCCC--CCCH
Q 018529          235 MTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAV--F---M-TKPINVLNERTLKGTFFGNYKP--RTDL  306 (354)
Q Consensus       235 ~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~--~---~-~~~~~~~~~~~i~g~~~~~~~~--~~~~  306 (354)
                      ++++++|++||++|+ ..+..++++++++ |+++.+|.......  .   . +....+.+++++.+++...+..  .+.+
T Consensus       207 ~~~~gvd~vld~~g~-~~~~~~~~~l~~~-G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  284 (329)
T cd08294         207 AAPDGIDCYFDNVGG-EFSSTVLSHMNDF-GRVAVCGSISTYNDKEPKKGPYVQETIIFKQLKMEGFIVYRWQDRWPEAL  284 (329)
T ss_pred             HCCCCcEEEEECCCH-HHHHHHHHhhccC-CEEEEEcchhccCCCCCCcCcccHHHHhhhcceEEEEEhhhhHHHHHHHH
Confidence            776689999999998 7889999999997 99999985421110  0   1 1112244788888876543311  1236


Q ss_pred             HHHHHHHHccCCCCCCceeeeeccccHHHHHHHHhcCCc-eeEEEec
Q 018529          307 PSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM  352 (354)
Q Consensus       307 ~~~~~~~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~~  352 (354)
                      +++++++.++++++.  ....|+++++++|++.+.+++. +|+|+++
T Consensus       285 ~~~~~l~~~g~i~~~--~~~~~~l~~~~~A~~~~~~~~~~gkvvv~~  329 (329)
T cd08294         285 KQLLKWIKEGKLKYR--EHVTEGFENMPQAFIGMLKGENTGKAIVKV  329 (329)
T ss_pred             HHHHHHHHCCCCcCC--cccccCHHHHHHHHHHHHcCCCCCeEEEeC
Confidence            678899999988765  3356899999999999988775 6888864

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>cd08232 idonate-5-DH L-idonate 5-dehydrogenase

Probab=100.00  E-value=4.2e-40  Score=299.58  Aligned_cols=324  Identities=26%  Similarity=0.405  Sum_probs=258.1

Q ss_pred             eeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhc-cCCC--CCCCCcccccceeEEEEEeCCCCCCCCCCCE
Q 018529           15 VAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWE-SKGQ--TPLFPRIFGHEAAGVVESVGEGVSDLEVGDH   91 (354)
Q Consensus        15 ~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~-~~~~--~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~   91 (354)
                      ++++.+. +++.+.++|.++++||+||+.++++|++|+.... +...  ...+|.++|+|++|+|+++|+++++|++||+
T Consensus         2 ~~~~~~~-~~~~~~~~p~l~~~~v~I~v~~~~i~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~   80 (339)
T cd08232           2 VIHAAGD-LRVEERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEAVGPGVTGLAPGQR   80 (339)
T ss_pred             eeccCCc-eEEEEcCCCCCCCCEEEEEEEEEEECcccHHHHcCCCCCcccccCCeecCccceEEEEeeCCCCCcCCCCCE
Confidence            3556665 9999999999999999999999999999988763 2221  1235778999999999999999999999999


Q ss_pred             EEecccCCCCCCcccccCCCC-CCccccc--------ccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhh
Q 018529           92 VLPVFTGECGDCRHCRFSING-EPVNHFL--------GTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATL  162 (354)
Q Consensus        92 V~~~~~~~~~~c~~c~~~~~~-~~~~~~~--------~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~  162 (354)
                      |++.+..+|++|.+|..+... +....+.        ..|+|++|+.++++.++++|+++++++|+. ..+++++|+++.
T Consensus        81 V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~~~~~~aa~-~~~~~~a~~~l~  159 (339)
T cd08232          81 VAVNPSRPCGTCDYCRAGRPNLCLNMRFLGSAMRFPHVQGGFREYLVVDASQCVPLPDGLSLRRAAL-AEPLAVALHAVN  159 (339)
T ss_pred             EEEccCCcCCCChHHhCcCcccCccccceeeccccCCCCCceeeEEEechHHeEECcCCCCHHHhhh-cchHHHHHHHHH
Confidence            999999999999999766543 2221111        358999999999999999999999999876 568889999876


Q ss_pred             hhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccE
Q 018529          163 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDR  242 (354)
Q Consensus       163 ~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dv  242 (354)
                      +...+ ++++|||.|+|.+|.+++|+|+.+|+.+|+++++++++.++++++|++.++++++.+  +.+ +. ...+++|+
T Consensus       160 ~~~~~-~~~~VLI~g~g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~~~~g~~~vi~~~~~~--~~~-~~-~~~~~vd~  234 (339)
T cd08232         160 RAGDL-AGKRVLVTGAGPIGALVVAAARRAGAAEIVATDLADAPLAVARAMGADETVNLARDP--LAA-YA-ADKGDFDV  234 (339)
T ss_pred             hcCCC-CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCCEEEcCCchh--hhh-hh-ccCCCccE
Confidence            55556 999999998899999999999999986789998999999999999998888876543  211 11 11236999


Q ss_pred             EEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhh-hccccEEEEEeccCCCCCCCHHHHHHHHHccCCCCC
Q 018529          243 SVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELE  321 (354)
Q Consensus       243 v~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  321 (354)
                      +||+.|+...++.++++|+++ |+++.++.....  ....... +.+++++.+...    ..+.++++++++.++.+.+.
T Consensus       235 vld~~g~~~~~~~~~~~L~~~-G~~v~~g~~~~~--~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~i~~~  307 (339)
T cd08232         235 VFEASGAPAALASALRVVRPG-GTVVQVGMLGGP--VPLPLNALVAKELDLRGSFR----FDDEFAEAVRLLAAGRIDVR  307 (339)
T ss_pred             EEECCCCHHHHHHHHHHHhcC-CEEEEEecCCCC--ccCcHHHHhhcceEEEEEec----CHHHHHHHHHHHHcCCCCch
Confidence            999999767889999999997 999999864421  2222222 347778877652    23468889999999988766


Q ss_pred             CceeeeeccccHHHHHHHHhcCCc-eeEEEec
Q 018529          322 KFITHRIPFSEINKAFEYMVKGEG-LRCIISM  352 (354)
Q Consensus       322 ~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~~  352 (354)
                      +.+.++|+++++++|++.+.+++. +|+|+++
T Consensus       308 ~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  339 (339)
T cd08232         308 PLITAVFPLEEAAEAFALAADRTRSVKVQLSF  339 (339)
T ss_pred             hheeEEecHHHHHHHHHHHHhCCCceeEEEeC
Confidence            667889999999999999987664 6888763

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai

>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]

Probab=100.00  E-value=1e-40  Score=276.24  Aligned_cols=319  Identities=23%  Similarity=0.349  Sum_probs=259.8

Q ss_pred             ccchhcceeeeccCCCc---eEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCC-CCCCcccccceeEEEEEeCC
Q 018529            6 GLILTCKAAVAWEAGKP---LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGE   81 (354)
Q Consensus         6 ~~~~~~~a~~~~~~~~~---l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~   81 (354)
                      -+|...|++++.+.+.|   +++++.++|....++|+||.+|+.||++|+-.++|.++- +.+|.+-|.|++|.|+.+|+
T Consensus        15 q~~~~~kalvY~~hgdP~kVlql~~~~~p~~~~s~v~Vk~LAaPINPsDIN~IQGvYpvrP~~PAVgGnEGv~eVv~vGs   94 (354)
T KOG0025|consen   15 QMPARSKALVYSEHGDPAKVLQLKNLELPAVPGSDVLVKMLAAPINPSDINQIQGVYPVRPELPAVGGNEGVGEVVAVGS   94 (354)
T ss_pred             ccccccceeeecccCCchhhheeecccCCCCCCCceeeeeeecCCChHHhhhhccccCCCCCCCcccCCcceEEEEEecC
Confidence            36777899999999988   889999999987778999999999999999999999876 56799999999999999999


Q ss_pred             CCCCCCCCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhh
Q 018529           82 GVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGAT  161 (354)
Q Consensus        82 ~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l  161 (354)
                      ++++|++||+|+...                      .+.|+|++|.+.+++.++++++.++++.||++..+.+|||..|
T Consensus        95 ~vkgfk~Gd~VIp~~----------------------a~lGtW~t~~v~~e~~Li~vd~~~pl~~AAT~~VNP~TAyrmL  152 (354)
T KOG0025|consen   95 NVKGFKPGDWVIPLS----------------------ANLGTWRTEAVFSESDLIKVDKDIPLASAATLSVNPCTAYRML  152 (354)
T ss_pred             CcCccCCCCeEeecC----------------------CCCccceeeEeecccceEEcCCcCChhhhheeccCchHHHHHH
Confidence            999999999999763                      3569999999999999999999999999999999999999999


Q ss_pred             hhhcCCCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHH----HHhcCCceEEcCCCCC-hhHHHHHHHH
Q 018529          162 LNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEE----AKKFGVTDFVNTSEHD-RPIQEVIAEM  235 (354)
Q Consensus       162 ~~~~~~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~----~~~lg~~~v~~~~~~~-~~~~~~i~~~  235 (354)
                      .+...+++||+|+=.|+ +++|.+.+|+|+++|+ +-+.+.|+....+.    ++.+|+++|+-.++-. ........  
T Consensus       153 ~dfv~L~~GD~vIQNganS~VG~~ViQlaka~Gi-ktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~~~~~~k~~~--  229 (354)
T KOG0025|consen  153 KDFVQLNKGDSVIQNGANSGVGQAVIQLAKALGI-KTINVVRDRPNIEELKKQLKSLGATEVITEEELRDRKMKKFKG--  229 (354)
T ss_pred             HHHHhcCCCCeeeecCcccHHHHHHHHHHHHhCc-ceEEEeecCccHHHHHHHHHHcCCceEecHHHhcchhhhhhhc--
Confidence            89999999999988998 9999999999999999 66666677655444    4669999998544322 11111111  


Q ss_pred             cCCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhhccccEEEEEeccCCCCCC--------CHH
Q 018529          236 TNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRT--------DLP  307 (354)
Q Consensus       236 ~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~--------~~~  307 (354)
                      ....+...|||+|+ .......+.|..+ |.++.+|..+...........++|+++++|+|+..|...+        .+.
T Consensus       230 ~~~~prLalNcVGG-ksa~~iar~L~~G-gtmvTYGGMSkqPv~~~ts~lIFKdl~~rGfWvt~W~~~~~~pe~~~~~i~  307 (354)
T KOG0025|consen  230 DNPRPRLALNCVGG-KSATEIARYLERG-GTMVTYGGMSKQPVTVPTSLLIFKDLKLRGFWVTRWKKEHKSPEERKEMID  307 (354)
T ss_pred             cCCCceEEEeccCc-hhHHHHHHHHhcC-ceEEEecCccCCCcccccchheeccceeeeeeeeehhhccCCcHHHHHHHH
Confidence            12378999999999 6777888999997 9999999887543333333346699999999998886532        356


Q ss_pred             HHHHHHHccCCCCCCceeeeeccccHHHHHHHHhcCC--ceeEEEecC
Q 018529          308 SVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGE--GLRCIISME  353 (354)
Q Consensus       308 ~~~~~~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~--~~k~vi~~~  353 (354)
                      ++.+++..|++....  ....+|++...|++...+..  .+|.+|.++
T Consensus       308 ~~~~l~~~G~i~~~~--~e~v~L~~~~tald~~L~~~~~~~Kq~i~~e  353 (354)
T KOG0025|consen  308 ELCDLYRRGKLKAPN--CEKVPLADHKTALDAALSKFGKSGKQIIVLE  353 (354)
T ss_pred             HHHHHHHcCeecccc--ceeeechhhhHHHHHHHHHhccCCceEEEec
Confidence            788899999876553  35679999999988654433  357777764

>TIGR00692 tdh L-threonine 3-dehydrogenase

Probab=100.00  E-value=8.2e-40  Score=297.67  Aligned_cols=328  Identities=29%  Similarity=0.413  Sum_probs=262.9

Q ss_pred             ccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCC---CCCCCCcccccceeEEEEEeCCCCCCCCCCCEEE
Q 018529           17 WEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKG---QTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVL   93 (354)
Q Consensus        17 ~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~---~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~   93 (354)
                      ++++.++++.+.|.|.|+++|++||+.++++|+.|+..+.+..   ....+|.++|+|++|+|+++|+++++|++||+|+
T Consensus         5 ~~~~~~~~l~~~~~p~~~~~ev~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~   84 (340)
T TIGR00692         5 TKPGYGAELTEVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKVGDYVS   84 (340)
T ss_pred             ccCCCCcEEEECCCCCCCCCeEEEEEEEEEEcccCHHHHcCCCCCCCCCCCCcccccceEEEEEEECCCCCcCCCCCEEE
Confidence            4677889999999999999999999999999999998765431   1123567899999999999999999999999999


Q ss_pred             ecccCCCCCCcccccCCCC---CC-cccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhcCCCC
Q 018529           94 PVFTGECGDCRHCRFSING---EP-VNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPER  169 (354)
Q Consensus        94 ~~~~~~~~~c~~c~~~~~~---~~-~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~  169 (354)
                      +.+.+.|+.|..|..+...   .. .++....|+|++|+.++++.++++|+++++.++ +++.++.++++++  ....++
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a-~~~~~~~~a~~~~--~~~~~~  161 (340)
T TIGR00692        85 VETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGCFAEYAVVPAQNIWKNPKSIPPEYA-TIQEPLGNAVHTV--LAGPIS  161 (340)
T ss_pred             ECCcCCCCCChhhhCcChhhCcCcceEeecCCCcceeEEEeehHHcEECcCCCChHhh-hhcchHHHHHHHH--HccCCC
Confidence            9999999999988544322   11 111224689999999999999999999998654 5667888898875  345789


Q ss_pred             CCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC-CccEEEEccc
Q 018529          170 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTG  248 (354)
Q Consensus       170 ~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~~dvv~d~~g  248 (354)
                      |++|+|.|+|++|.+++|+|+.+|++.|+++++++++.+.++++|++.++++.+.+  +.+.+.+++++ ++|++||+.|
T Consensus       162 g~~vlI~~~g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~--~~~~l~~~~~~~~~d~vld~~g  239 (340)
T TIGR00692       162 GKSVLVTGAGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAKKMGATYVVNPFKED--VVKEVADLTDGEGVDVFLEMSG  239 (340)
T ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEEcccccC--HHHHHHHhcCCCCCCEEEECCC
Confidence            99999988899999999999999995588888899999999999998888876654  77888887766 8999999998


Q ss_pred             ChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhhccccEEEEEeccCCCCCCCHHHHHHHHHccCCCCCCceeeee
Q 018529          249 NIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRI  328 (354)
Q Consensus       249 ~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  328 (354)
                      +...+..++++++++ |+++.+|.........+....+.+++++.+...  ....+.+.++++++.++++.+.+.+.+.+
T Consensus       240 ~~~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~~  316 (340)
T TIGR00692       240 APKALEQGLQAVTPG-GRVSLLGLPPGKVTIDFTNKVIFKGLTIYGITG--RHMFETWYTVSRLIQSGKLDLDPIITHKF  316 (340)
T ss_pred             CHHHHHHHHHhhcCC-CEEEEEccCCCCcccchhhhhhhcceEEEEEec--CCchhhHHHHHHHHHcCCCChHHheeeee
Confidence            777889999999997 999999875322222222122346777776542  12224578899999999887555577899


Q ss_pred             ccccHHHHHHHHhcCCceeEEEec
Q 018529          329 PFSEINKAFEYMVKGEGLRCIISM  352 (354)
Q Consensus       329 ~l~~~~~a~~~~~~~~~~k~vi~~  352 (354)
                      +++++.++++.+.+++.+|+|+++
T Consensus       317 ~l~~~~~a~~~~~~~~~gkvvv~~  340 (340)
T TIGR00692       317 KFDKFEKGFELMRSGQTGKVILSL  340 (340)
T ss_pred             eHHHHHHHHHHHhcCCCceEEEeC
Confidence            999999999999877767888864

E. coli His-90 modulates substrate specificity and is believed part of the active site.

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=100.00  E-value=2.9e-41  Score=298.53  Aligned_cols=258  Identities=26%  Similarity=0.402  Sum_probs=213.5

Q ss_pred             ccccceeEEEEEeCCCCC------CCCCCCEEEecccCCCCCCcccccCCCC-CCcccc----------cccccceeeEE
Q 018529           67 IFGHEAAGVVESVGEGVS------DLEVGDHVLPVFTGECGDCRHCRFSING-EPVNHF----------LGTSTFSEYTV  129 (354)
Q Consensus        67 ~~G~e~~G~V~~vG~~~~------~~~~Gd~V~~~~~~~~~~c~~c~~~~~~-~~~~~~----------~~~g~~a~~~~  129 (354)
                      ++|||++|+|+++|++++      +|++||||++.+..+|++|.+|+.+... |.....          ...|+|+||+.
T Consensus         1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~~~~~~~G~~aey~~   80 (280)
T TIGR03366         1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKYGHEALDSGWPLSGGYAEHCH   80 (280)
T ss_pred             CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhhcCcccccCCccccccceeeEE
Confidence            589999999999999999      8999999999999999999999876432 222211          13599999999


Q ss_pred             eecc-ceEECCCCCCccchhhcccchhhhhhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHH
Q 018529          130 VHSG-CVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFE  208 (354)
Q Consensus       130 v~~~-~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~  208 (354)
                      +|++ .++++|+++++++++.+++.+.|+|+++ +.....++++|||+|+|++|++++|+|+.+|+++|++++++++|.+
T Consensus        81 v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~G~G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~~  159 (280)
T TIGR03366        81 LPAGTAIVPVPDDLPDAVAAPAGCATATVMAAL-EAAGDLKGRRVLVVGAGMLGLTAAAAAAAAGAARVVAADPSPDRRE  159 (280)
T ss_pred             ecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHH-HhccCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHH
Confidence            9998 7999999999999999999999999986 4456679999999999999999999999999966999999999999


Q ss_pred             HHHhcCCceEEcCCCCChhHHHHHHHHcCC-CccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhh-h
Q 018529          209 EAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-V  286 (354)
Q Consensus       209 ~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~  286 (354)
                      +++++|++.+++..+    ..+.+++++.+ ++|++||++|.+..+..++++++++ |+++.+|.........+.... +
T Consensus       160 ~a~~~Ga~~~i~~~~----~~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~i~~~~~~  234 (280)
T TIGR03366       160 LALSFGATALAEPEV----LAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVG-GTAVLAGSVFPGGPVALDPEQVV  234 (280)
T ss_pred             HHHHcCCcEecCchh----hHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCC-CEEEEeccCCCCCceeeCHHHHH
Confidence            999999998887643    33456666666 8999999999888899999999997 999999975422233333333 3


Q ss_pred             ccccEEEEEeccCCCCCCCHHHHHHHHHcc--CCCCCCceeeeeccccH
Q 018529          287 LNERTLKGTFFGNYKPRTDLPSVVDMYMNK--QLELEKFITHRIPFSEI  333 (354)
Q Consensus       287 ~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~~~~l~~~  333 (354)
                      .+++++.|+....   .++++++++++.++  ++.+.++++++|||+|+
T Consensus       235 ~~~~~i~g~~~~~---~~~~~~~~~~l~~~~~~~~~~~~it~~~~l~~~  280 (280)
T TIGR03366       235 RRWLTIRGVHNYE---PRHLDQAVRFLAANGQRFPFEELVGKPFPLADV  280 (280)
T ss_pred             hCCcEEEecCCCC---HHHHHHHHHHHHhhCCCCCHHHHhhcccccccC
Confidence            4899999976432   35799999999984  56677889999999874

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=100.00  E-value=2.3e-40  Score=299.47  Aligned_cols=290  Identities=19%  Similarity=0.243  Sum_probs=235.5

Q ss_pred             eEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCEEEecccCCCCC
Q 018529           23 LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGD  102 (354)
Q Consensus        23 l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~~~  102 (354)
                      +++.+.+.|+|++|||||||.|+|+|+.|..   |.......|.++|.|++|+|+++|+   +|++||+|++.       
T Consensus        19 l~~~~~~~p~~~~~evlv~v~a~~~n~~~~~---g~~~~~~~~~i~G~~~~g~v~~~~~---~~~~GdrV~~~-------   85 (325)
T TIGR02825        19 FELKTVELPPLNNGEVLLEALFLSVDPYMRV---AAKRLKEGDTMMGQQVARVVESKNV---ALPKGTIVLAS-------   85 (325)
T ss_pred             eEEEeccCCCCCCCcEEEEEEEEecCHHHhc---ccCcCCCCCcEecceEEEEEEeCCC---CCCCCCEEEEe-------
Confidence            8889999999999999999999999997654   3222233478999999999999874   59999999854       


Q ss_pred             CcccccCCCCCCcccccccccceeeEEeeccceEEC----CCCCCccch-hhcccchhhhhhhhhhhcCCCCCCeEEEEc
Q 018529          103 CRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKI----NPLAPLDKV-CILSCGVSTGLGATLNVAKPERGSSVAVFG  177 (354)
Q Consensus       103 c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~----P~~~~~~~a-a~l~~~~~~a~~~l~~~~~~~~~~~vlI~G  177 (354)
                                         ++|++|+.++.+.+.++    |+++++++| +++++++.|||+++.+.+++++|++|||+|
T Consensus        86 -------------------~~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~~~~~TA~~~l~~~~~~~~g~~VLI~g  146 (325)
T TIGR02825        86 -------------------PGWTSHSISDGKDLEKLLTEWPDTLPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNA  146 (325)
T ss_pred             -------------------cCceeeEEechhheEEccccccCCCCHHHHHHhcccHHHHHHHHHHHHhCCCCCCEEEEeC
Confidence                               36999999999988887    899999997 678999999999988889999999999998


Q ss_pred             C-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcccChHhHHHH
Q 018529          178 L-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISA  256 (354)
Q Consensus       178 ~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~~~~~~~~  256 (354)
                      + |++|.+++|+|+..|+ +|+++++++++.++++++|++.++++.+.+ .+.+.++..+++++|++||++|+ ..+..+
T Consensus       147 a~g~vG~~aiqlAk~~G~-~Vi~~~~s~~~~~~~~~lGa~~vi~~~~~~-~~~~~~~~~~~~gvdvv~d~~G~-~~~~~~  223 (325)
T TIGR02825       147 AAGAVGSVVGQIAKLKGC-KVVGAAGSDEKVAYLKKLGFDVAFNYKTVK-SLEETLKKASPDGYDCYFDNVGG-EFSNTV  223 (325)
T ss_pred             CccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEeccccc-cHHHHHHHhCCCCeEEEEECCCH-HHHHHH
Confidence            6 9999999999999999 899999999999999999999999887642 25566666665589999999998 577999


Q ss_pred             HHHhhCCCceEEEEcCCCCC---ceee---cchhhhccccEEEEEeccCCCC---CCCHHHHHHHHHccCCCCCCceeee
Q 018529          257 FECVHDGWGVAVLVGVPSKD---AVFM---TKPINVLNERTLKGTFFGNYKP---RTDLPSVVDMYMNKQLELEKFITHR  327 (354)
Q Consensus       257 ~~~l~~~~g~~v~~g~~~~~---~~~~---~~~~~~~~~~~i~g~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~v~~~  327 (354)
                      +++++++ |+++.+|.....   ....   .....+.+++++.++....+..   .+.++++++++.+|++++.  +...
T Consensus       224 ~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--~~~~  300 (325)
T TIGR02825       224 IGQMKKF-GRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEGFIVNRWQGEVRQKALKELLKWVLEGKIQYK--EYVI  300 (325)
T ss_pred             HHHhCcC-cEEEEecchhhcccCCCCCCCcchHHHhhhcceEeEEEehhhhhhhhHHHHHHHHHHHHCCCcccc--eecc
Confidence            9999997 999999865321   0111   1112234778888876533221   2357889999999988765  4467


Q ss_pred             eccccHHHHHHHHhcCCc-eeEEE
Q 018529          328 IPFSEINKAFEYMVKGEG-LRCII  350 (354)
Q Consensus       328 ~~l~~~~~a~~~~~~~~~-~k~vi  350 (354)
                      |+|+++.+|++.+.+++. +|+|+
T Consensus       301 ~~l~~~~~A~~~~~~~~~~gkvVv  324 (325)
T TIGR02825       301 EGFENMPAAFMGMLKGENLGKTIV  324 (325)
T ss_pred             ccHHHHHHHHHHHhcCCCCCeEEe
Confidence            899999999999988775 57775

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>cd08234 threonine_DH_like L-threonine dehydrogenase

Probab=100.00  E-value=1.4e-39  Score=295.53  Aligned_cols=328  Identities=30%  Similarity=0.456  Sum_probs=267.5

Q ss_pred             cceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 018529           11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD   90 (354)
Q Consensus        11 ~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd   90 (354)
                      |||+++.++++ +++.+.+.|+++++||+||+.++++|+.|+....|..+. .+|.++|+|++|+|+.+|++++++++||
T Consensus         1 ~~a~~~~~~~~-~~~~~~~~~~l~~~~v~v~v~~~~l~~~d~~~~~g~~~~-~~p~~~g~~~~G~v~~vG~~v~~~~~Gd   78 (334)
T cd08234           1 MKALVYEGPGE-LEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYEGEFGA-APPLVPGHEFAGVVVAVGSKVTGFKVGD   78 (334)
T ss_pred             CeeEEecCCCc-eEEEeccCCCCCCCeEEEEEEEEeEchhhhHHhcCCCCC-CCCcccccceEEEEEEeCCCCCCCCCCC
Confidence            78999998885 999999999999999999999999999999988775543 3678999999999999999999999999


Q ss_pred             EEEecccCCCCCCcccccCCCC-CCccccc---ccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhcC
Q 018529           91 HVLPVFTGECGDCRHCRFSING-EPVNHFL---GTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK  166 (354)
Q Consensus        91 ~V~~~~~~~~~~c~~c~~~~~~-~~~~~~~---~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~~  166 (354)
                      +|++.+...|+.|.+|..+..+ +...+..   ..|+|++|+.++++.++++|+++++.+++.+ +.+.++++++ +.++
T Consensus        79 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~l-~~~~  156 (334)
T cd08234          79 RVAVDPNIYCGECFYCRRGRPNLCENLTAVGVTRNGGFAEYVVVPAKQVYKIPDNLSFEEAALA-EPLSCAVHGL-DLLG  156 (334)
T ss_pred             EEEEcCCcCCCCCccccCcChhhCCCcceeccCCCCcceeEEEecHHHcEECcCCCCHHHHhhh-hHHHHHHHHH-HhcC
Confidence            9999888889999999654332 1111112   3589999999999999999999999998776 6888999986 7889


Q ss_pred             CCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEc
Q 018529          167 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  246 (354)
Q Consensus       167 ~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~  246 (354)
                      ++++++|||+|+|.+|.+++++|+..|++.|+++++++++.+.++++|++.++++.+.+  +... +....+++|++||+
T Consensus       157 ~~~g~~vlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~-~~~~~~~vd~v~~~  233 (334)
T cd08234         157 IKPGDSVLVFGAGPIGLLLAQLLKLNGASRVTVAEPNEEKLELAKKLGATETVDPSRED--PEAQ-KEDNPYGFDVVIEA  233 (334)
T ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCeEEecCCCCC--HHHH-HHhcCCCCcEEEEC
Confidence            99999999998899999999999999995588899999999999999998888776654  4344 33333489999999


Q ss_pred             ccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhhc-cccEEEEEeccCCCCCCCHHHHHHHHHccCCCCCCcee
Q 018529          247 TGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFIT  325 (354)
Q Consensus       247 ~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  325 (354)
                      +|.......++++++++ |+++.+|.........+....+. +++++.+....    .+.++++++++.++++.+.+.+.
T Consensus       234 ~~~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~~~~~  308 (334)
T cd08234         234 TGVPKTLEQAIEYARRG-GTVLVFGVYAPDARVSISPFEIFQKELTIIGSFIN----PYTFPRAIALLESGKIDVKGLVS  308 (334)
T ss_pred             CCChHHHHHHHHHHhcC-CEEEEEecCCCCCCcccCHHHHHhCCcEEEEeccC----HHHHHHHHHHHHcCCCChhhhEE
Confidence            98767889999999997 99999987543222333333333 67778776532    24588899999999887655567


Q ss_pred             eeeccccHHHHHHHHhcCCceeEEE
Q 018529          326 HRIPFSEINKAFEYMVKGEGLRCII  350 (354)
Q Consensus       326 ~~~~l~~~~~a~~~~~~~~~~k~vi  350 (354)
                      ++++++++.++++.+.+...+|+|+
T Consensus       309 ~~~~~~~~~~a~~~~~~~~~~k~vi  333 (334)
T cd08234         309 HRLPLEEVPEALEGMRSGGALKVVV  333 (334)
T ss_pred             EEecHHHHHHHHHHHhcCCceEEEe
Confidence            8899999999999998833367775

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=2.5e-39  Score=294.71  Aligned_cols=330  Identities=31%  Similarity=0.485  Sum_probs=270.3

Q ss_pred             cceeeeccCC-CceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCC-CCCCcccccceeEEEEEeCCCCCCCCC
Q 018529           11 CKAAVAWEAG-KPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLEV   88 (354)
Q Consensus        11 ~~a~~~~~~~-~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~~~~~~~   88 (354)
                      |||+++.+++ ..+++.+++.|.+.++|++||+.++++|++|+....+..+. ...|.++|+|++|+|+++|++++.+++
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~vG~~~~~~~~   80 (341)
T cd08297           1 MKAAVVEEFGEKPYEVKDVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWPVKPKLPLIGGHEGAGVVVAVGPGVSGLKV   80 (341)
T ss_pred             CceEEeeccCCCCceEEEeeCCCCCCCeEEEEEEEeecchhHHHHHcCCCCcCCCCCccCCcccceEEEEeCCCCCCCCC
Confidence            7899998877 34999999999999999999999999999999888765432 234668899999999999999999999


Q ss_pred             CCEEEecc-cCCCCCCcccccCCCCC-C---cccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhh
Q 018529           89 GDHVLPVF-TGECGDCRHCRFSINGE-P---VNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLN  163 (354)
Q Consensus        89 Gd~V~~~~-~~~~~~c~~c~~~~~~~-~---~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~  163 (354)
                      ||+|++.+ ...|+.|.+|..+.... .   ..+....|+|++|+.++++.++++|+++++.+++.++..+.+||+++..
T Consensus        81 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~lp~~~~~~~~a~l~~~~~ta~~~~~~  160 (341)
T cd08297          81 GDRVGVKWLYDACGKCEYCRTGDETLCPNQKNSGYTVDGTFAEYAIADARYVTPIPDGLSFEQAAPLLCAGVTVYKALKK  160 (341)
T ss_pred             CCEEEEecCCCCCCCCccccCCCcccCCCccccccccCCcceeEEEeccccEEECCCCCCHHHHHHHHcchHHHHHHHHh
Confidence            99999765 56789998885443221 1   1122235899999999999999999999999999999999999998654


Q ss_pred             hcCCCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC-Ccc
Q 018529          164 VAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVD  241 (354)
Q Consensus       164 ~~~~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~~d  241 (354)
                       .+++++++|||+|+ +.+|++++++|+++|+ +|+++++++++.+.++++|++.++++.+.+  +.+.+.+.+++ ++|
T Consensus       161 -~~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~--~~~~~~~~~~~~~vd  236 (341)
T cd08297         161 -AGLKPGDWVVISGAGGGLGHLGVQYAKAMGL-RVIAIDVGDEKLELAKELGADAFVDFKKSD--DVEAVKELTGGGGAH  236 (341)
T ss_pred             -cCCCCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHcCCcEEEcCCCcc--HHHHHHHHhcCCCCC
Confidence             58999999999987 6799999999999999 899999999999999999999998887654  77788888766 899


Q ss_pred             EEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhh-ccccEEEEEeccCCCCCCCHHHHHHHHHccCCCC
Q 018529          242 RSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLEL  320 (354)
Q Consensus       242 vv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~  320 (354)
                      ++||+.++......++++++++ |+++.+|.... ....+....+ .++.++.+.....   .++++++++++.++++.+
T Consensus       237 ~vl~~~~~~~~~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~  311 (341)
T cd08297         237 AVVVTAVSAAAYEQALDYLRPG-GTLVCVGLPPG-GFIPLDPFDLVLRGITIVGSLVGT---RQDLQEALEFAARGKVKP  311 (341)
T ss_pred             EEEEcCCchHHHHHHHHHhhcC-CEEEEecCCCC-CCCCCCHHHHHhcccEEEEeccCC---HHHHHHHHHHHHcCCCcc
Confidence            9999887778899999999998 99999986542 2223333222 4788888754321   256888999999997754


Q ss_pred             CCceeeeeccccHHHHHHHHhcCCc-eeEEEec
Q 018529          321 EKFITHRIPFSEINKAFEYMVKGEG-LRCIISM  352 (354)
Q Consensus       321 ~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~~  352 (354)
                        .+ +.|+++++.++++.+.+++. +|+|++|
T Consensus       312 --~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~  341 (341)
T cd08297         312 --HI-QVVPLEDLNEVFEKMEEGKIAGRVVVDF  341 (341)
T ss_pred             --ee-EEEcHHHHHHHHHHHHcCCccceEEEeC
Confidence              33 67999999999999988765 6888875

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=9.8e-40  Score=298.51  Aligned_cols=322  Identities=24%  Similarity=0.270  Sum_probs=255.9

Q ss_pred             cceeeeccCCCc--eEEEE-eecCCCCCCeEEEEEeeeecCccchhhhccCCC--------------------CCCCCcc
Q 018529           11 CKAAVAWEAGKP--LIIQD-VEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ--------------------TPLFPRI   67 (354)
Q Consensus        11 ~~a~~~~~~~~~--l~~~~-~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~--------------------~~~~p~~   67 (354)
                      |||+++.+++.+  +++.+ .+.|++.+++|+|||.++++|++|+....|..+                    ...+|.+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~   80 (350)
T cd08274           1 MRAVLLTGHGGLDKLVYRDDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPRI   80 (350)
T ss_pred             CeEEEEeccCCccceeecccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCccccccccccccccccccCCCCCCcc
Confidence            688888876653  55543 477778999999999999999999988766432                    2346889


Q ss_pred             cccceeEEEEEeCCCCCCCCCCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccch
Q 018529           68 FGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKV  147 (354)
Q Consensus        68 ~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~a  147 (354)
                      +|||++|+|+++|+++++|++||+|++.+..+|+.|..|....    ..+....|+|++|+.++++.++++|+++++.++
T Consensus        81 ~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~----~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~  156 (350)
T cd08274          81 QGADIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDPADID----YIGSERDGGFAEYTVVPAENAYPVNSPLSDVEL  156 (350)
T ss_pred             cCCcceEEEEEeCCCCCCCCCCCEEEEecCcCCCCcccccccc----ccCCCCCccceEEEEecHHHceeCCCCCCHHHH
Confidence            9999999999999999999999999999888888887764221    111112489999999999999999999999999


Q ss_pred             hhcccchhhhhhhhhhhcCCCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCCh
Q 018529          148 CILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDR  226 (354)
Q Consensus       148 a~l~~~~~~a~~~l~~~~~~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~  226 (354)
                      +.+++++.+||+++ ...+++++++|||+|+ |++|++++++|+.+|+ +++++++++ +.+.++++|++.+++..... 
T Consensus       157 a~l~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~-~vi~~~~~~-~~~~~~~~g~~~~~~~~~~~-  232 (350)
T cd08274         157 ATFPCSYSTAENML-ERAGVGAGETVLVTGASGGVGSALVQLAKRRGA-IVIAVAGAA-KEEAVRALGADTVILRDAPL-  232 (350)
T ss_pred             HhcccHHHHHHHHH-hhcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCC-EEEEEeCch-hhHHHHhcCCeEEEeCCCcc-
Confidence            99999999999986 7788999999999998 9999999999999999 678887665 88888999997655543322 


Q ss_pred             hHHHHHHHHcCC-CccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhh-hccccEEEEEeccCCCCCC
Q 018529          227 PIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNYKPRT  304 (354)
Q Consensus       227 ~~~~~i~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~~~~  304 (354)
                       +.+  ...+.+ ++|++||++|+ ..+..++++++++ |+++.+|.... ....+.... +.++.++.++....   ..
T Consensus       233 -~~~--~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---~~  303 (350)
T cd08274         233 -LAD--AKALGGEPVDVVADVVGG-PLFPDLLRLLRPG-GRYVTAGAIAG-PVVELDLRTLYLKDLTLFGSTLGT---RE  303 (350)
T ss_pred             -HHH--HHhhCCCCCcEEEecCCH-HHHHHHHHHhccC-CEEEEecccCC-ccccCCHHHhhhcceEEEEeecCC---HH
Confidence             333  444455 89999999998 6889999999997 99999986532 112333333 44788888876532   24


Q ss_pred             CHHHHHHHHHccCCCCCCceeeeeccccHHHHHHHHhcCCc-eeEEEe
Q 018529          305 DLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIIS  351 (354)
Q Consensus       305 ~~~~~~~~~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~  351 (354)
                      .+.++++++.++++.+  .+.+.|+++++++|++.+.+++. +|+|++
T Consensus       304 ~~~~~~~l~~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvvi~  349 (350)
T cd08274         304 VFRRLVRYIEEGEIRP--VVAKTFPLSEIREAQAEFLEKRHVGKLVLV  349 (350)
T ss_pred             HHHHHHHHHHCCCccc--ccccccCHHHHHHHHHHHhcCCCceEEEEe
Confidence            6888999999997654  36788999999999999987665 588875

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=2.6e-39  Score=293.48  Aligned_cols=325  Identities=28%  Similarity=0.447  Sum_probs=264.6

Q ss_pred             cceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 018529           11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD   90 (354)
Q Consensus        11 ~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd   90 (354)
                      |||+++..+++++.+.+.|.|.+.++||+|+++++++|+.|+....|..+....|.++|||++|+|+++|++++.+++||
T Consensus         1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd   80 (332)
T cd08259           1 MKAAILHKPNKPLQIEEVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFPRGKYPLILGHEIVGTVEEVGEGVERFKPGD   80 (332)
T ss_pred             CeEEEEecCCCceEEEEccCCCCCCCeEEEEEEEEecchhhhHHhcCCCCCCCCCeeccccceEEEEEECCCCccCCCCC
Confidence            68999987666699999999999999999999999999999999887665555678999999999999999999999999


Q ss_pred             EEEecccCCCCCCcccccCCCC-CCc---ccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhcC
Q 018529           91 HVLPVFTGECGDCRHCRFSING-EPV---NHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK  166 (354)
Q Consensus        91 ~V~~~~~~~~~~c~~c~~~~~~-~~~---~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~~  166 (354)
                      +|++.+..+|+.|.+|...... |.+   ++....|+|++|+.++.+.++++|+++++++++.+++++.+||+++.. +.
T Consensus        81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~-~~  159 (332)
T cd08259          81 RVILYYYIPCGKCEYCLSGEENLCRNRAEYGEEVDGGFAEYVKVPERSLVKLPDNVSDESAALAACVVGTAVHALKR-AG  159 (332)
T ss_pred             EEEECCCCCCcCChhhhCCCcccCCCccccccccCCeeeeEEEechhheEECCCCCCHHHHhhhccHHHHHHHHHHH-hC
Confidence            9999999999999999755422 222   122235899999999999999999999999999999999999999765 88


Q ss_pred             CCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEE
Q 018529          167 PERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVE  245 (354)
Q Consensus       167 ~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d  245 (354)
                      +.+++++||+|+ |.+|++++++++..|. .|+++++++++.+.++++|.+.+++..+    +.+.+.+..  ++|++++
T Consensus       160 ~~~~~~vlI~ga~g~vG~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~--~~d~v~~  232 (332)
T cd08259         160 VKKGDTVLVTGAGGGVGIHAIQLAKALGA-RVIAVTRSPEKLKILKELGADYVIDGSK----FSEDVKKLG--GADVVIE  232 (332)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHcCCcEEEecHH----HHHHHHhcc--CCCEEEE
Confidence            999999999987 9999999999999999 8888889999999998899877775433    455555543  6999999


Q ss_pred             cccChHhHHHHHHHhhCCCceEEEEcCCCCCcee-ecchhhhccccEEEEEeccCCCCCCCHHHHHHHHHccCCCCCCce
Q 018529          246 CTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVF-MTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFI  324 (354)
Q Consensus       246 ~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~-~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  324 (354)
                      ++|. .....++++++++ |+++.++........ .... ...++.++.++..   ....+++++++++.++.+.+  .+
T Consensus       233 ~~g~-~~~~~~~~~~~~~-g~~v~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~--~~  304 (332)
T cd08259         233 LVGS-PTIEESLRSLNKG-GRLVLIGNVTPDPAPLRPGL-LILKEIRIIGSIS---ATKADVEEALKLVKEGKIKP--VI  304 (332)
T ss_pred             CCCh-HHHHHHHHHhhcC-CEEEEEcCCCCCCcCCCHHH-HHhCCcEEEEecC---CCHHHHHHHHHHHHcCCCcc--ce
Confidence            9998 5688899999997 999999865422111 1111 1236667766532   22346788999999997654  36


Q ss_pred             eeeeccccHHHHHHHHhcCCc-eeEEEe
Q 018529          325 THRIPFSEINKAFEYMVKGEG-LRCIIS  351 (354)
Q Consensus       325 ~~~~~l~~~~~a~~~~~~~~~-~k~vi~  351 (354)
                      .+.|+++++.+||+.+.+++. +|+|++
T Consensus       305 ~~~~~~~~~~~a~~~~~~~~~~~kvv~~  332 (332)
T cd08259         305 DRVVSLEDINEALEDLKSGKVVGRIVLK  332 (332)
T ss_pred             eEEEcHHHHHHHHHHHHcCCcccEEEeC
Confidence            789999999999999988775 577763

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein

Probab=100.00  E-value=6.1e-39  Score=291.62  Aligned_cols=308  Identities=17%  Similarity=0.187  Sum_probs=245.6

Q ss_pred             ceeeeccC---CCc--eEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCC
Q 018529           12 KAAVAWEA---GKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDL   86 (354)
Q Consensus        12 ~a~~~~~~---~~~--l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~   86 (354)
                      ||+++.++   +.+  +++.++|.|+|+++||+|||.++++|+.|+....+..+...+|.++|+|++|+|+++|++++.|
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~   80 (336)
T TIGR02817         1 KAVGYKKPLPITDPDALVDIDLPKPKPGGRDLLVEVKAISVNPVDTKVRARMAPEAGQPKILGWDAAGVVVAVGDEVTLF   80 (336)
T ss_pred             CceeeccccCCCCcccceecccCCCCCCCCEEEEEEEEEEcChHHHHHHcCCCCCCCCCcccceeeEEEEEEeCCCCCCC
Confidence            57777775   443  8888999999999999999999999999998887755444567899999999999999999999


Q ss_pred             CCCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhcC
Q 018529           87 EVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK  166 (354)
Q Consensus        87 ~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~~  166 (354)
                      ++||+|++...                    ....|+|++|+.++++.++++|+++++++++.+++++.+||+++....+
T Consensus        81 ~~Gd~V~~~~~--------------------~~~~g~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~  140 (336)
T TIGR02817        81 KPGDEVWYAGD--------------------IDRPGSNAEFHLVDERIVGHKPKSLSFAEAAALPLTSITAWELLFDRLG  140 (336)
T ss_pred             CCCCEEEEcCC--------------------CCCCCcccceEEEcHHHcccCCCCCCHHHHhhhhHHHHHHHHHHHHhcC
Confidence            99999986410                    1135899999999999999999999999999999999999999877888


Q ss_pred             CCC-----CCeEEEEcC-ChhHHHHHHHHHHc-CCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCC
Q 018529          167 PER-----GSSVAVFGL-GAVGLAAAEGARIA-GASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGG  239 (354)
Q Consensus       167 ~~~-----~~~vlI~G~-g~~G~~a~~~a~~~-g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~  239 (354)
                      +++     |++|||+|+ |++|++++|+|+.+ |+ +|+++++++++.++++++|+++++++.. +  +.+++++...++
T Consensus       141 ~~~~~~~~g~~vlV~ga~g~vg~~~~~~ak~~~G~-~vi~~~~~~~~~~~l~~~g~~~~~~~~~-~--~~~~i~~~~~~~  216 (336)
T TIGR02817       141 INDPVAGDKRALLIIGGAGGVGSILIQLARQLTGL-TVIATASRPESQEWVLELGAHHVIDHSK-P--LKAQLEKLGLEA  216 (336)
T ss_pred             CCCCCCCCCCEEEEEcCCcHHHHHHHHHHHHhCCC-EEEEEcCcHHHHHHHHHcCCCEEEECCC-C--HHHHHHHhcCCC
Confidence            877     999999986 99999999999998 99 8999999999999999999999988654 2  777777754458


Q ss_pred             ccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhhc-cccEEEEEecc--CCCCC-------CCHHHH
Q 018529          240 VDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTFFG--NYKPR-------TDLPSV  309 (354)
Q Consensus       240 ~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g~~~~--~~~~~-------~~~~~~  309 (354)
                      +|+++|++++...+...+++++++ |+++.++...     .+....+. +++++.+..+.  ....+       +.++++
T Consensus       217 vd~vl~~~~~~~~~~~~~~~l~~~-G~~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (336)
T TIGR02817       217 VSYVFSLTHTDQHFKEIVELLAPQ-GRFALIDDPA-----ELDISPFKRKSISLHWEFMFTRSMFQTADMIEQHHLLNRV  290 (336)
T ss_pred             CCEEEEcCCcHHHHHHHHHHhccC-CEEEEEcccc-----cccchhhhhcceEEEEEEeecccccchhhhhhhHHHHHHH
Confidence            999999987768899999999997 9999885321     12222222 44555543322  11100       236778


Q ss_pred             HHHHHccCCCCCCceeeee---ccccHHHHHHHHhcCCc-eeEEEe
Q 018529          310 VDMYMNKQLELEKFITHRI---PFSEINKAFEYMVKGEG-LRCIIS  351 (354)
Q Consensus       310 ~~~~~~~~~~~~~~v~~~~---~l~~~~~a~~~~~~~~~-~k~vi~  351 (354)
                      ++++.++.+++.  +.+.+   +++++++|++.+.+++. +|+++.
T Consensus       291 ~~l~~~~~l~~~--~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  334 (336)
T TIGR02817       291 ARLVDAGKIRTT--LAETFGTINAANLKRAHALIESGKARGKIVLE  334 (336)
T ss_pred             HHHHHCCCeecc--chhccCCCCHHHHHHHHHHHHcCCccceEEEe
Confidence            899999976643  33444   46899999999988775 577764

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.

>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=6.4e-39  Score=290.17  Aligned_cols=314  Identities=25%  Similarity=0.302  Sum_probs=251.0

Q ss_pred             cceeeeccCC-CceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 018529           11 CKAAVAWEAG-KPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG   89 (354)
Q Consensus        11 ~~a~~~~~~~-~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~G   89 (354)
                      ||++++..++ ..+++.+.+.|+++++||+||+.++++|++|+....+ .....+|.++|||++|+|+.+|++++.|++|
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~v~v~~~~i~~~d~~~~~~-~~~~~~~~~~g~e~~G~v~~vG~~v~~~~~G   79 (325)
T cd08264           1 MKALVFEKSGIENLKVEDVKDPKPGPGEVLIRVKMAGVNPVDYNVINA-VKVKPMPHIPGAEFAGVVEEVGDHVKGVKKG   79 (325)
T ss_pred             CeeEEeccCCCCceEEEeccCCCCCCCeEEEEEEEEEechHHHHHHhC-CCCCCCCeecccceeEEEEEECCCCCCCCCC
Confidence            6899887766 3488888888889999999999999999999988764 2222357789999999999999999999999


Q ss_pred             CEEEecccCCCCCCcccccCCCCCC-c---ccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhc
Q 018529           90 DHVLPVFTGECGDCRHCRFSINGEP-V---NHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVA  165 (354)
Q Consensus        90 d~V~~~~~~~~~~c~~c~~~~~~~~-~---~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~  165 (354)
                      |+|++.+...|++|.+|..+....+ .   ++....|+|++|+.++++.++++|+++++++++.+++++.+||+++. ..
T Consensus        80 d~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~-~~  158 (325)
T cd08264          80 DRVVVYNRVFDGTCDMCLSGNEMLCRNGGIIGVVSNGGYAEYIVVPEKNLFKIPDSISDELAASLPVAALTAYHALK-TA  158 (325)
T ss_pred             CEEEECCCcCCCCChhhcCCCccccCccceeeccCCCceeeEEEcCHHHceeCCCCCCHHHhhhhhhhhHHHHHHHH-hc
Confidence            9999999999999999986653322 1   12223589999999999999999999999999999999999999964 48


Q ss_pred             CCCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEE
Q 018529          166 KPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSV  244 (354)
Q Consensus       166 ~~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~  244 (354)
                      +++++++|+|+|+ |++|++++++|+++|+ +|+++++    .++++++|++.+++..+    ..+.+++++ +++|+|+
T Consensus       159 ~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~-~v~~~~~----~~~~~~~g~~~~~~~~~----~~~~l~~~~-~~~d~vl  228 (325)
T cd08264         159 GLGPGETVVVFGASGNTGIFAVQLAKMMGA-EVIAVSR----KDWLKEFGADEVVDYDE----VEEKVKEIT-KMADVVI  228 (325)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEeH----HHHHHHhCCCeeecchH----HHHHHHHHh-CCCCEEE
Confidence            8999999999997 9999999999999999 7777752    36778899988887643    345566666 6899999


Q ss_pred             EcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhh-ccccEEEEEeccCCCCCCCHHHHHHHHHccCCCCCCc
Q 018529          245 ECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKF  323 (354)
Q Consensus       245 d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  323 (354)
                      +++|+ ..+..++++++++ |+++.+|.... .........+ .++.++.++..+.   +++++++++++...  .+  .
T Consensus       229 ~~~g~-~~~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~--~~--~  298 (325)
T cd08264         229 NSLGS-SFWDLSLSVLGRG-GRLVTFGTLTG-GEVKLDLSDLYSKQISIIGSTGGT---RKELLELVKIAKDL--KV--K  298 (325)
T ss_pred             ECCCH-HHHHHHHHhhccC-CEEEEEecCCC-CCCccCHHHHhhcCcEEEEccCCC---HHHHHHHHHHHHcC--Cc--e
Confidence            99998 6889999999997 99999986421 1122222222 3566777765332   35688888888533  32  3


Q ss_pred             eeeeeccccHHHHHHHHhcCCce
Q 018529          324 ITHRIPFSEINKAFEYMVKGEGL  346 (354)
Q Consensus       324 v~~~~~l~~~~~a~~~~~~~~~~  346 (354)
                      +.+.|+++++++|++.+.+++..
T Consensus       299 ~~~~~~~~~~~~a~~~~~~~~~~  321 (325)
T cd08264         299 VWKTFKLEEAKEALKELFSKERD  321 (325)
T ss_pred             eEEEEcHHHHHHHHHHHHcCCCc
Confidence            56889999999999998876653

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=100.00  E-value=4.8e-39  Score=292.88  Aligned_cols=314  Identities=24%  Similarity=0.334  Sum_probs=254.9

Q ss_pred             cceeeeccCCCc---eEEEEeecCCCCC-CeEEEEEeeeecCccchhhhccCCCCC-C----CCcccccceeEEEEEeCC
Q 018529           11 CKAAVAWEAGKP---LIIQDVEVAPPQA-MEVRIKIKYTSLCRTDLYFWESKGQTP-L----FPRIFGHEAAGVVESVGE   81 (354)
Q Consensus        11 ~~a~~~~~~~~~---l~~~~~~~p~~~~-~evlV~v~~~~i~~~D~~~~~~~~~~~-~----~p~~~G~e~~G~V~~vG~   81 (354)
                      |||+++.+.+.+   +.+.+.|.|+|.+ +||+||+.++++|++|+....+..+.. .    .|.++|||++|+|+++|+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~v~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~g~e~~G~V~~vG~   80 (341)
T cd08290           1 AKALVYTEHGEPKEVLQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGNEGVGEVVKVGS   80 (341)
T ss_pred             CceEEEccCCCchhheEEeecCCCCCCCCCEEEEEEEecCCCHHHHHHhcCcCCCCCcccCCCCCCCCcceEEEEEEeCC
Confidence            799999988875   8999999998887 999999999999999999887754322 2    577899999999999999


Q ss_pred             CCCCCCCCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhh
Q 018529           82 GVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGAT  161 (354)
Q Consensus        82 ~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l  161 (354)
                      +++.|++||+|++...                      +.|+|++|+.++++.++++|+++++++++.+++++.+||+++
T Consensus        81 ~v~~~~~Gd~V~~~~~----------------------~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l  138 (341)
T cd08290          81 GVKSLKPGDWVIPLRP----------------------GLGTWRTHAVVPADDLIKVPNDVDPEQAATLSVNPCTAYRLL  138 (341)
T ss_pred             CCCCCCCCCEEEecCC----------------------CCccchheEeccHHHeEeCCCCCCHHHHHHhhccHHHHHHHH
Confidence            9999999999986521                      348999999999999999999999999999999999999998


Q ss_pred             hhhcCCCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCCh----hhHHHHHhcCCceEEcCCCCC-hhHHHHHHHH
Q 018529          162 LNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS----KRFEEAKKFGVTDFVNTSEHD-RPIQEVIAEM  235 (354)
Q Consensus       162 ~~~~~~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~----~~~~~~~~lg~~~v~~~~~~~-~~~~~~i~~~  235 (354)
                      .....++++++|||+|+ |++|++++|+|++.|+ +++++.+++    ++.++++++|++.++++.+.. ..+.+.++.+
T Consensus       139 ~~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~  217 (341)
T cd08290         139 EDFVKLQPGDWVIQNGANSAVGQAVIQLAKLLGI-KTINVVRDRPDLEELKERLKALGADHVLTEEELRSLLATELLKSA  217 (341)
T ss_pred             HhhcccCCCCEEEEccchhHHHHHHHHHHHHcCC-eEEEEEcCCCcchhHHHHHHhcCCCEEEeCcccccccHHHHHHHH
Confidence            77788999999999987 9999999999999999 677776665    678888999999998876540 0266777776


Q ss_pred             cCCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecch-hhhccccEEEEEeccCCCC---C----CCHH
Q 018529          236 TNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP-INVLNERTLKGTFFGNYKP---R----TDLP  307 (354)
Q Consensus       236 ~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~-~~~~~~~~i~g~~~~~~~~---~----~~~~  307 (354)
                      .++++|++|||+|+ ..+..++++++++ |+++.+|..... ...... ..+.++.++.+.....+..   .    ..+.
T Consensus       218 ~~~~~d~vld~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (341)
T cd08290         218 PGGRPKLALNCVGG-KSATELARLLSPG-GTMVTYGGMSGQ-PVTVPTSLLIFKDITLRGFWLTRWLKRANPEEKEDMLE  294 (341)
T ss_pred             cCCCceEEEECcCc-HhHHHHHHHhCCC-CEEEEEeccCCC-CcccCHHHHhhCCceEEEEecHHHHhhcCHHHHHHHHH
Confidence            65589999999998 5677889999997 999999864322 222222 2245888988877543321   1    1377


Q ss_pred             HHHHHHHccCCCCCCceeeee---ccccHHHHHHHHhcCCc-eeEEEec
Q 018529          308 SVVDMYMNKQLELEKFITHRI---PFSEINKAFEYMVKGEG-LRCIISM  352 (354)
Q Consensus       308 ~~~~~~~~~~~~~~~~v~~~~---~l~~~~~a~~~~~~~~~-~k~vi~~  352 (354)
                      .+++++.++++.+.  ....+   ++++++++++.+.+++. +|+|+.+
T Consensus       295 ~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~a~~~~~~~~~~~k~v~~~  341 (341)
T cd08290         295 ELAELIREGKLKAP--PVEKVTDDPLEEFKDALANALKGGGGGKQVLVM  341 (341)
T ss_pred             HHHHHHHcCCccCC--cccccccCCHHHHHHHHHHHhhcCCCCeEEEeC
Confidence            78899999977654  33455   99999999999987765 5888764

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional

Probab=100.00  E-value=3.6e-39  Score=292.05  Aligned_cols=314  Identities=22%  Similarity=0.274  Sum_probs=253.4

Q ss_pred             hcceeeeccCCCc--eEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCC
Q 018529           10 TCKAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLE   87 (354)
Q Consensus        10 ~~~a~~~~~~~~~--l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   87 (354)
                      +||++.+.+++.+  +++.+++.|.++++||+||+.++++|++|+....+..+...+|.++|||++|+|+.+|++++.++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~   80 (327)
T PRK10754          1 MAKRIEFHKHGGPEVLQAVEFTPADPAENEVQVENKAIGINYIDTYIRSGLYPPPSLPSGLGTEAAGVVSKVGSGVKHIK   80 (327)
T ss_pred             CceEEEEeccCChhHeEEeeccCCCCCCCEEEEEEEEEEcCHHHhhhcCCCCCCCCCCCccCcceEEEEEEeCCCCCCCC
Confidence            5899999887765  88999999999999999999999999999988877655555688899999999999999999999


Q ss_pred             CCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhcCC
Q 018529           88 VGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKP  167 (354)
Q Consensus        88 ~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~~~  167 (354)
                      +||+|+...                      .+.|+|++|+.++.+.++++|+++++++++.+++.+.++|.++...+.+
T Consensus        81 ~Gd~V~~~~----------------------~~~g~~~~~v~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~l~~~~~~  138 (327)
T PRK10754         81 VGDRVVYAQ----------------------SALGAYSSVHNVPADKAAILPDAISFEQAAASFLKGLTVYYLLRKTYEI  138 (327)
T ss_pred             CCCEEEECC----------------------CCCcceeeEEEcCHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHhhcCC
Confidence            999997431                      1347999999999999999999999999999988999999987777889


Q ss_pred             CCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC-CccEEEE
Q 018529          168 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVE  245 (354)
Q Consensus       168 ~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~~dvv~d  245 (354)
                      ++|++|+|+|+ |.+|++++++|+.+|+ +|+++++++++.++++++|++.+++..+.+  +.+.+++++++ ++|++||
T Consensus       139 ~~g~~vlI~g~~g~ig~~~~~lak~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~d~vl~  215 (327)
T PRK10754        139 KPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGSAQKAQRAKKAGAWQVINYREEN--IVERVKEITGGKKVRVVYD  215 (327)
T ss_pred             CCCCEEEEEeCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHCCCCEEEcCCCCc--HHHHHHHHcCCCCeEEEEE
Confidence            99999999975 9999999999999999 788898999999999999998888776554  77888888887 8999999


Q ss_pred             cccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhhc-cccE-EE-EEeccCCCCCC----CHHHHHHHHHccCC
Q 018529          246 CTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERT-LK-GTFFGNYKPRT----DLPSVVDMYMNKQL  318 (354)
Q Consensus       246 ~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~-~~~~-i~-g~~~~~~~~~~----~~~~~~~~~~~~~~  318 (354)
                      ++|+ ......+++++++ |+++.+|..... ........+. ++.. .. ..........+    .+.++++++.++++
T Consensus       216 ~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l  292 (327)
T PRK10754        216 SVGK-DTWEASLDCLQRR-GLMVSFGNASGP-VTGVNLGILNQKGSLYVTRPSLQGYITTREELTEASNELFSLIASGVI  292 (327)
T ss_pred             CCcH-HHHHHHHHHhccC-CEEEEEccCCCC-CCCcCHHHHhccCceEEecceeecccCCHHHHHHHHHHHHHHHHCCCe
Confidence            9988 6788899999997 999999865421 1111111111 1111 11 10000111111    24567889999988


Q ss_pred             CCCCceeeeeccccHHHHHHHHhcCCc-eeEEEe
Q 018529          319 ELEKFITHRIPFSEINKAFEYMVKGEG-LRCIIS  351 (354)
Q Consensus       319 ~~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~  351 (354)
                      .+.....+.|+++++.++++.+.+++. +|+||+
T Consensus       293 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~  326 (327)
T PRK10754        293 KVDVAEQQKFPLKDAQRAHEILESRATQGSSLLI  326 (327)
T ss_pred             eeecccCcEEcHHHHHHHHHHHHcCCCcceEEEe
Confidence            765455688999999999999988775 688875

>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=1.2e-38  Score=288.75  Aligned_cols=319  Identities=26%  Similarity=0.354  Sum_probs=258.2

Q ss_pred             cceeeeccCCC----ceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCC
Q 018529           11 CKAAVAWEAGK----PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDL   86 (354)
Q Consensus        11 ~~a~~~~~~~~----~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~   86 (354)
                      |||+++.+++.    ++++.+.+.|.++++||+||+.++++|++|+....|..+....|.++|||++|+|+++|++++++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~irv~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~   80 (329)
T cd08298           1 MKAMVLEKPGPIEENPLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLPPPKLPLIPGHEIVGRVEAVGPGVTRF   80 (329)
T ss_pred             CeEEEEecCCCCCCCCceEEeccCCCCCCCEEEEEEEEEeccHHHHHHHhCCCCCCCCCccccccccEEEEEECCCCCCC
Confidence            68999988883    58888888888999999999999999999999887765555668899999999999999999999


Q ss_pred             CCCCEEEecc-cCCCCCCcccccCCCC-CCc---ccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhh
Q 018529           87 EVGDHVLPVF-TGECGDCRHCRFSING-EPV---NHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGAT  161 (354)
Q Consensus        87 ~~Gd~V~~~~-~~~~~~c~~c~~~~~~-~~~---~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l  161 (354)
                      ++||+|++.+ ..+|++|++|..+... +..   .+....|+|++|+.++.+.++++|+++++.+++.+++++.+||+++
T Consensus        81 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~~  160 (329)
T cd08298          81 SVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFTGYTVDGGYAEYMVADERFAYPIPEDYDDEEAAPLLCAGIIGYRAL  160 (329)
T ss_pred             cCCCEEEEeccCCCCCCChhHhCcChhhCCCccccccccCCceEEEEEecchhEEECCCCCCHHHhhHhhhhhHHHHHHH
Confidence            9999997654 3679999999644321 111   1222358999999999999999999999999999999999999997


Q ss_pred             hhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCcc
Q 018529          162 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVD  241 (354)
Q Consensus       162 ~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~d  241 (354)
                       ..+++++++++||+|+|++|++++++|+..|. +|+++++++++.+.++++|++.+++....           ..+++|
T Consensus       161 -~~~~~~~~~~vlV~g~g~vg~~~~~la~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~-----------~~~~vD  227 (329)
T cd08298         161 -KLAGLKPGQRLGLYGFGASAHLALQIARYQGA-EVFAFTRSGEHQELARELGADWAGDSDDL-----------PPEPLD  227 (329)
T ss_pred             -HhhCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEcCChHHHHHHHHhCCcEEeccCcc-----------CCCccc
Confidence             88999999999999999999999999999998 89999999999999999999877766432           123799


Q ss_pred             EEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhhccccEEEEEeccCCCCCCCHHHHHHHHHccCCCCC
Q 018529          242 RSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELE  321 (354)
Q Consensus       242 vv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  321 (354)
                      +++++.+....++.++++++++ |+++.+|.... .........+.++..+.++...   ..+.+.++++++.++.+.+ 
T Consensus       228 ~vi~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~l~~~~~l~~-  301 (329)
T cd08298         228 AAIIFAPVGALVPAALRAVKKG-GRVVLAGIHMS-DIPAFDYELLWGEKTIRSVANL---TRQDGEEFLKLAAEIPIKP-  301 (329)
T ss_pred             EEEEcCCcHHHHHHHHHHhhcC-CEEEEEcCCCC-CCCccchhhhhCceEEEEecCC---CHHHHHHHHHHHHcCCCCc-
Confidence            9999977768899999999997 99999885331 1111222223356667665532   2245788889999987765 


Q ss_pred             CceeeeeccccHHHHHHHHhcCCc-eeEEE
Q 018529          322 KFITHRIPFSEINKAFEYMVKGEG-LRCII  350 (354)
Q Consensus       322 ~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi  350 (354)
                        ..+.|+++++++|++.+.+++. +|+|+
T Consensus       302 --~~~~~~~~~~~~a~~~~~~~~~~~~~v~  329 (329)
T cd08298         302 --EVETYPLEEANEALQDLKEGRIRGAAVL  329 (329)
T ss_pred             --eEEEEeHHHHHHHHHHHHcCCCcceeeC
Confidence              2588999999999999988765 46653

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=3e-38  Score=287.52  Aligned_cols=330  Identities=24%  Similarity=0.343  Sum_probs=268.0

Q ss_pred             cceeeeccCCCc--eEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCC-CCCCcccccceeEEEEEeCCCCCCCC
Q 018529           11 CKAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLE   87 (354)
Q Consensus        11 ~~a~~~~~~~~~--l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~~~~~~   87 (354)
                      |||+++...+.+  +++.+.+.|.+.+++|+|++.++++|++|+..+.|..+. ..+|.++|||++|+|+.+|+++++|+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~   80 (342)
T cd08266           1 MKAVVIRGHGGPEVLEYGDLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGIKLPLPHILGSDGAGVVEAVGPGVTNVK   80 (342)
T ss_pred             CeEEEEecCCCccceeEeecCCCCCCCCeEEEEEEeeecCHHHHHHhcCCCCCCCCCCeecccceEEEEEEeCCCCCCCC
Confidence            689988744332  778888888889999999999999999999988774432 34578899999999999999999999


Q ss_pred             CCCEEEecccCCCCCCcccccCCC-CCCccccc---ccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhh
Q 018529           88 VGDHVLPVFTGECGDCRHCRFSIN-GEPVNHFL---GTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLN  163 (354)
Q Consensus        88 ~Gd~V~~~~~~~~~~c~~c~~~~~-~~~~~~~~---~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~  163 (354)
                      +||+|++.+..+|++|.+|..+.. .|....+.   ..|+|++|+.++.+.++++|+.+++.+++.+++++.+||+++.+
T Consensus        81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~~a~~~l~~  160 (342)
T cd08266          81 PGQRVVIYPGISCGRCEYCLAGRENLCAQYGILGEHVDGGYAEYVAVPARNLLPIPDNLSFEEAAAAPLTFLTAWHMLVT  160 (342)
T ss_pred             CCCEEEEccccccccchhhccccccccccccccccccCcceeEEEEechHHceeCCCCCCHHHHHhhhhHHHHHHHHHHH
Confidence            999999999999999999975543 23322222   34789999999999999999999999999999999999999878


Q ss_pred             hcCCCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC-Ccc
Q 018529          164 VAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVD  241 (354)
Q Consensus       164 ~~~~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~~d  241 (354)
                      ...++++++++|+|+ +.+|.+++++++..|+ +|+.+++++++.+.+++++.+.+++..+.+  +.+.+.+.+.+ ++|
T Consensus       161 ~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~d  237 (342)
T cd08266         161 RARLRPGETVLVHGAGSGVGSAAIQIAKLFGA-TVIATAGSEDKLERAKELGADYVIDYRKED--FVREVRELTGKRGVD  237 (342)
T ss_pred             hcCCCCCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCeEEecCChH--HHHHHHHHhCCCCCc
Confidence            889999999999987 7999999999999999 788888999999999888887777655433  66667666655 899


Q ss_pred             EEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecch-hhhccccEEEEEeccCCCCCCCHHHHHHHHHccCCCC
Q 018529          242 RSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP-INVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLEL  320 (354)
Q Consensus       242 vv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~-~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~  320 (354)
                      ++++++|. ..+..++++++++ |+++.++..... ...... ..+.+++++.+.....   ...+.++++++.++.+.+
T Consensus       238 ~~i~~~g~-~~~~~~~~~l~~~-G~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~l~~  311 (342)
T cd08266         238 VVVEHVGA-ATWEKSLKSLARG-GRLVTCGATTGY-EAPIDLRHVFWRQLSILGSTMGT---KAELDEALRLVFRGKLKP  311 (342)
T ss_pred             EEEECCcH-HHHHHHHHHhhcC-CEEEEEecCCCC-CCCcCHHHHhhcceEEEEEecCC---HHHHHHHHHHHHcCCccc
Confidence            99999988 6788999999997 999999866432 112222 2244777887765432   246788899999987654


Q ss_pred             CCceeeeeccccHHHHHHHHhcCCc-eeEEEe
Q 018529          321 EKFITHRIPFSEINKAFEYMVKGEG-LRCIIS  351 (354)
Q Consensus       321 ~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~  351 (354)
                        .+++.|+++++++|++.+.+++. +|++++
T Consensus       312 --~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~  341 (342)
T cd08266         312 --VIDSVFPLEEAAEAHRRLESREQFGKIVLT  341 (342)
T ss_pred             --ceeeeEcHHHHHHHHHHHHhCCCCceEEEe
Confidence              36789999999999999887665 588875

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins

Probab=100.00  E-value=2.3e-38  Score=287.17  Aligned_cols=323  Identities=30%  Similarity=0.466  Sum_probs=261.3

Q ss_pred             ceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCE
Q 018529           12 KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDH   91 (354)
Q Consensus        12 ~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~   91 (354)
                      ||+++.+++..+++++.|.|.+.+++++|++.++++|++|+....+......+|.++|||++|+|+++|+++++|++||+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~v~~~g~~~~~~~~Gd~   80 (330)
T cd08245           1 KAAVVHAAGGPLEPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWGGSKYPLVPGHEIVGEVVEVGAGVEGRKVGDR   80 (330)
T ss_pred             CeEEEecCCCCceEEeccCCCCCCCeEEEEEEEEeccHHHHHHHcCCCCCCCCCcccCccceEEEEEECCCCcccccCCE
Confidence            68889888666999999999999999999999999999999988776544456789999999999999999999999999


Q ss_pred             EEeccc-CCCCCCcccccCCCCC-Ccc---cccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhcC
Q 018529           92 VLPVFT-GECGDCRHCRFSINGE-PVN---HFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK  166 (354)
Q Consensus        92 V~~~~~-~~~~~c~~c~~~~~~~-~~~---~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~~  166 (354)
                      |+..+. ..|++|++|..+..+. ...   .....|+|++|+.++++.++++|+++++.+++.+.+.+.+||+++.. ..
T Consensus        81 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~l~~~~~ta~~~l~~-~~  159 (330)
T cd08245          81 VGVGWLVGSCGRCEYCRRGLENLCQKAVNTGYTTQGGYAEYMVADAEYTVLLPDGLPLAQAAPLLCAGITVYSALRD-AG  159 (330)
T ss_pred             EEEccccCCCCCChhhhCcCcccCcCccccCcccCCccccEEEEcHHHeEECCCCCCHHHhhhhhhhHHHHHHHHHh-hC
Confidence            986543 6799999997655432 111   12235899999999999999999999999999999999999998744 78


Q ss_pred             CCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEc
Q 018529          167 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  246 (354)
Q Consensus       167 ~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~  246 (354)
                      ++++++|||+|+|.+|.+++++|+.+|. +|+++++++++.++++++|++.+++.....  ....    ..+++|+++++
T Consensus       160 ~~~~~~vlI~g~g~iG~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~----~~~~~d~vi~~  232 (330)
T cd08245         160 PRPGERVAVLGIGGLGHLAVQYARAMGF-ETVAITRSPDKRELARKLGADEVVDSGAEL--DEQA----AAGGADVILVT  232 (330)
T ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhCCcEEeccCCcc--hHHh----ccCCCCEEEEC
Confidence            9999999999988899999999999999 899999999999999999998888765433  2222    22479999999


Q ss_pred             ccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchh-hhccccEEEEEeccCCCCCCCHHHHHHHHHccCCCCCCcee
Q 018529          247 TGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI-NVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFIT  325 (354)
Q Consensus       247 ~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~-~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  325 (354)
                      ++.......++++++++ |+++.++..... ....... .+.++.++.++..+.   ...++.+++++.++.+.+   ..
T Consensus       233 ~~~~~~~~~~~~~l~~~-G~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ll~~~~l~~---~~  304 (330)
T cd08245         233 VVSGAAAEAALGGLRRG-GRIVLVGLPESP-PFSPDIFPLIMKRQSIAGSTHGG---RADLQEALDFAAEGKVKP---MI  304 (330)
T ss_pred             CCcHHHHHHHHHhcccC-CEEEEECCCCCC-ccccchHHHHhCCCEEEEeccCC---HHHHHHHHHHHHcCCCcc---eE
Confidence            88778889999999997 999999865322 1111112 233677787776432   246788889999987764   34


Q ss_pred             eeeccccHHHHHHHHhcCCc-eeEEE
Q 018529          326 HRIPFSEINKAFEYMVKGEG-LRCII  350 (354)
Q Consensus       326 ~~~~l~~~~~a~~~~~~~~~-~k~vi  350 (354)
                      +.+++++++++|+.+.+++. +|+|+
T Consensus       305 ~~~~~~~~~~a~~~~~~~~~~~~~v~  330 (330)
T cd08245         305 ETFPLDQANEAYERMEKGDVRFRFVL  330 (330)
T ss_pred             EEEcHHHHHHHHHHHHcCCCCcceeC
Confidence            78999999999999988775 46653

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=100.00  E-value=5e-38  Score=284.18  Aligned_cols=312  Identities=20%  Similarity=0.229  Sum_probs=254.8

Q ss_pred             cceeeeccCCCc--eEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCC---CCCCcccccceeEEEEEeCCCCCC
Q 018529           11 CKAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT---PLFPRIFGHEAAGVVESVGEGVSD   85 (354)
Q Consensus        11 ~~a~~~~~~~~~--l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~---~~~p~~~G~e~~G~V~~vG~~~~~   85 (354)
                      |||+.+++++.+  +++.+.+.|.+.++||+|++.++++|++|+....|..+.   ...|.++|||++|+|+++|++++.
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~g~e~~G~v~~~G~~v~~   80 (324)
T cd08244           1 MRAIRLHEFGPPEVLVPEDVPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELPYVPGGEVAGVVDAVGPGVDP   80 (324)
T ss_pred             CeEEEEcCCCCccceEEeccCCCCCCCCEEEEEEEEEeCCHHHHHHhCCCCCCCCCCCCCcCCccceEEEEEEeCCCCCC
Confidence            689999876653  667777777788999999999999999999888765432   345788999999999999999999


Q ss_pred             CCCCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhc
Q 018529           86 LEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVA  165 (354)
Q Consensus        86 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~  165 (354)
                      +++||+|++...                     ...|+|++|++++.+.++++|+++++.+++.+++++.+|| ++....
T Consensus        81 ~~~Gd~V~~~~~---------------------~~~g~~~~~~~v~~~~~~~lp~~~~~~~a~~~~~~~~ta~-~~~~~~  138 (324)
T cd08244          81 AWLGRRVVAHTG---------------------RAGGGYAELAVADVDSLHPVPDGLDLEAAVAVVHDGRTAL-GLLDLA  138 (324)
T ss_pred             CCCCCEEEEccC---------------------CCCceeeEEEEEchHHeEeCCCCCCHHHHhhhcchHHHHH-HHHHhc
Confidence            999999987521                     1358999999999999999999999999999999999995 456788


Q ss_pred             CCCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC-CccEE
Q 018529          166 KPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRS  243 (354)
Q Consensus       166 ~~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~~dvv  243 (354)
                      +++++++|+|+|+ |.+|.+++++|+.+|+ +|+++++++++.+.++++|++.+++..+.+  +.+.+.+++++ ++|++
T Consensus       139 ~~~~~~~vlI~g~~~~~g~~~~~la~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~d~v  215 (324)
T cd08244         139 TLTPGDVVLVTAAAGGLGSLLVQLAKAAGA-TVVGAAGGPAKTALVRALGADVAVDYTRPD--WPDQVREALGGGGVTVV  215 (324)
T ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCEEEecCCcc--HHHHHHHHcCCCCceEE
Confidence            9999999999986 9999999999999999 799999999999999999998888776654  77778777776 89999


Q ss_pred             EEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecch-hhhccccEEEEEeccCCCC---CCCHHHHHHHHHccCCC
Q 018529          244 VECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP-INVLNERTLKGTFFGNYKP---RTDLPSVVDMYMNKQLE  319 (354)
Q Consensus       244 ~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~-~~~~~~~~i~g~~~~~~~~---~~~~~~~~~~~~~~~~~  319 (354)
                      +|++|+ .....++++++++ |+++.+|...... ..+.. ..+.+++++.++.......   .+.++++++++.++++.
T Consensus       216 l~~~g~-~~~~~~~~~l~~~-g~~v~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~  292 (324)
T cd08244         216 LDGVGG-AIGRAALALLAPG-GRFLTYGWASGEW-TALDEDDARRRGVTVVGLLGVQAERGGLRALEARALAEAAAGRLV  292 (324)
T ss_pred             EECCCh-HhHHHHHHHhccC-cEEEEEecCCCCC-CccCHHHHhhCCcEEEEeecccCCHHHHHHHHHHHHHHHHCCCcc
Confidence            999998 4678999999997 9999998754322 23332 2244788888776543221   13467788888888765


Q ss_pred             CCCceeeeeccccHHHHHHHHhcCCc-eeEEEec
Q 018529          320 LEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM  352 (354)
Q Consensus       320 ~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~~  352 (354)
                      .  .+.+.|+++++.+|++.+.+++. +|+++++
T Consensus       293 ~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~  324 (324)
T cd08244         293 P--VVGQTFPLERAAEAHAALEARSTVGKVLLLP  324 (324)
T ss_pred             C--ccceEEeHHHHHHHHHHHHcCCCCceEEEeC
Confidence            3  36788999999999999988765 5888764

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=1.2e-37  Score=283.03  Aligned_cols=330  Identities=26%  Similarity=0.342  Sum_probs=267.3

Q ss_pred             cceeeeccCC--CceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCC-CCCCcccccceeEEEEEeCCCCCCCC
Q 018529           11 CKAAVAWEAG--KPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLE   87 (354)
Q Consensus        11 ~~a~~~~~~~--~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~~~~~~   87 (354)
                      |||++++..+  ..+++.+.+.|.++++|++|++.++++|++|+....+..+. ...|.++|||++|+|+++|+++++++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~   80 (336)
T cd08276           1 MKAWRLSGGGGLDNLKLVEEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYPPPVKDPLIPLSDGAGEVVAVGEGVTRFK   80 (336)
T ss_pred             CeEEEEeccCCCcceEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhcCCCCCCCCCCcccccceeEEEEEeCCCCcCCC
Confidence            7899998765  33888888888889999999999999999999988765433 23578899999999999999999999


Q ss_pred             CCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhcCC
Q 018529           88 VGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKP  167 (354)
Q Consensus        88 ~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~~~  167 (354)
                      +||+|++.....|..+.+|.....  ...+....|+|++|+.++++.++++|+++++.+++.+++++.+||+++.+.+.+
T Consensus        81 ~Gd~V~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~~a~~~l~~~~~~  158 (336)
T cd08276          81 VGDRVVPTFFPNWLDGPPTAEDEA--SALGGPIDGVLAEYVVLPEEGLVRAPDHLSFEEAATLPCAGLTAWNALFGLGPL  158 (336)
T ss_pred             CCCEEEEecccccccccccccccc--cccccccCceeeeEEEecHHHeEECCCCCCHHHhhhhhHHHHHHHHHHHhhcCC
Confidence            999999887666666544422111  112222368999999999999999999999999999999999999998777899


Q ss_pred             CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCC-CChhHHHHHHHHcCC-CccEEEE
Q 018529          168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE-HDRPIQEVIAEMTNG-GVDRSVE  245 (354)
Q Consensus       168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~-~~~~~~~~i~~~~~~-~~dvv~d  245 (354)
                      ++|++|+|+|+|++|++++++|++.|+ +|+++++++++.++++++|.+.+++... .+  +.+.+.+++++ ++|+++|
T Consensus       159 ~~g~~vli~g~g~~g~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~d~~i~  235 (336)
T cd08276         159 KPGDTVLVQGTGGVSLFALQFAKAAGA-RVIATSSSDEKLERAKALGADHVINYRTTPD--WGEEVLKLTGGRGVDHVVE  235 (336)
T ss_pred             CCCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEcCCcccC--HHHHHHHHcCCCCCcEEEE
Confidence            999999999889999999999999999 7999999999999999999988888765 33  77788888876 9999999


Q ss_pred             cccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhhccccEEEEEeccCCCCCCCHHHHHHHHHccCCCCCCcee
Q 018529          246 CTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFIT  325 (354)
Q Consensus       246 ~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  325 (354)
                      +++. ..+..++++++++ |+++.+|..............+.+++++.++....   .+.+.++++++.++.+.+.  ..
T Consensus       236 ~~~~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~l~~~--~~  308 (336)
T cd08276         236 VGGP-GTLAQSIKAVAPG-GVISLIGFLSGFEAPVLLLPLLTKGATLRGIAVGS---RAQFEAMNRAIEAHRIRPV--ID  308 (336)
T ss_pred             CCCh-HHHHHHHHhhcCC-CEEEEEccCCCCccCcCHHHHhhcceEEEEEecCc---HHHHHHHHHHHHcCCcccc--cC
Confidence            9986 6888999999997 99999987543211111122245888998877543   3468888899988766543  46


Q ss_pred             eeeccccHHHHHHHHhcCCc-eeEEEec
Q 018529          326 HRIPFSEINKAFEYMVKGEG-LRCIISM  352 (354)
Q Consensus       326 ~~~~l~~~~~a~~~~~~~~~-~k~vi~~  352 (354)
                      +.+++++++++++.+.+++. +|+++++
T Consensus       309 ~~~~~~~~~~a~~~~~~~~~~~kvv~~~  336 (336)
T cd08276         309 RVFPFEEAKEAYRYLESGSHFGKVVIRV  336 (336)
T ss_pred             cEEeHHHHHHHHHHHHhCCCCceEEEeC
Confidence            78999999999999987765 5887753

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=100.00  E-value=3.3e-38  Score=286.03  Aligned_cols=311  Identities=24%  Similarity=0.319  Sum_probs=254.3

Q ss_pred             hcceeeeccCCC----ceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCC-CCCCcccccceeEEEEEeCCCCC
Q 018529           10 TCKAAVAWEAGK----PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVS   84 (354)
Q Consensus        10 ~~~a~~~~~~~~----~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~~~   84 (354)
                      .|||+++.+++.    ++++++.+.|.+.++|++|||.++++|+.|+....|..+. ..+|.++|||++|+|+.+|++++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~p~~~g~e~~G~v~~vG~~v~   80 (329)
T cd08250           1 SFRKLVVHRLSPNFREATSIVDVPVPLPGPGEVLVKNRFVGINASDINFTAGRYDPGVKPPFDCGFEGVGEVVAVGEGVT   80 (329)
T ss_pred             CceEEEeccCCCCcccCceEEecCCCCCCCCEEEEEEEEEecCHHHHHHHhCCCCCCCCCCcccCceeEEEEEEECCCCC
Confidence            489999998776    3889999999999999999999999999999988775532 45788999999999999999999


Q ss_pred             CCCCCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhh
Q 018529           85 DLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNV  164 (354)
Q Consensus        85 ~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~  164 (354)
                      ++++||+|++.                        ..|+|++|+.++.+.++++|+.  +.+++.+++++.+||+++.+.
T Consensus        81 ~~~~Gd~V~~~------------------------~~g~~~s~~~v~~~~~~~ip~~--~~~~a~l~~~~~ta~~~l~~~  134 (329)
T cd08250          81 DFKVGDAVATM------------------------SFGAFAEYQVVPARHAVPVPEL--KPEVLPLLVSGLTASIALEEV  134 (329)
T ss_pred             CCCCCCEEEEe------------------------cCcceeEEEEechHHeEECCCC--cchhhhcccHHHHHHHHHHHh
Confidence            99999999865                        3579999999999999999997  457778889999999998777


Q ss_pred             cCCCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEE
Q 018529          165 AKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRS  243 (354)
Q Consensus       165 ~~~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv  243 (354)
                      .+++++++|+|+|+ |.+|.+++++|+..|+ .|+++++++++.+.++++|++.+++..+.+  +.+.+.+..++++|++
T Consensus       135 ~~~~~~~~vlI~ga~g~ig~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~--~~~~~~~~~~~~vd~v  211 (329)
T cd08250         135 GEMKSGETVLVTAAAGGTGQFAVQLAKLAGC-HVIGTCSSDEKAEFLKSLGCDRPINYKTED--LGEVLKKEYPKGVDVV  211 (329)
T ss_pred             cCCCCCCEEEEEeCccHHHHHHHHHHHHcCC-eEEEEeCcHHHHHHHHHcCCceEEeCCCcc--HHHHHHHhcCCCCeEE
Confidence            88999999999986 9999999999999999 789988999999999999998888766544  6666666654589999


Q ss_pred             EEcccChHhHHHHHHHhhCCCceEEEEcCCCCCc---------eeecchhhhccccEEEEEeccCCC--CCCCHHHHHHH
Q 018529          244 VECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA---------VFMTKPINVLNERTLKGTFFGNYK--PRTDLPSVVDM  312 (354)
Q Consensus       244 ~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~---------~~~~~~~~~~~~~~i~g~~~~~~~--~~~~~~~~~~~  312 (354)
                      ||++|+ ..+..++++++++ |+++.+|......         ...+....+.++.++.++......  ..+.+.+++++
T Consensus       212 ~~~~g~-~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (329)
T cd08250         212 YESVGG-EMFDTCVDNLALK-GRLIVIGFISGYQSGTGPSPVKGATLPPKLLAKSASVRGFFLPHYAKLIPQHLDRLLQL  289 (329)
T ss_pred             EECCcH-HHHHHHHHHhccC-CeEEEEecccCCcccCcccccccccccHHHhhcCceEEEEEhHHHHHHHHHHHHHHHHH
Confidence            999997 7889999999997 9999998654210         112222334578888887653221  12346778899


Q ss_pred             HHccCCCCCCceeeeeccccHHHHHHHHhcCCc-eeEEEe
Q 018529          313 YMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIIS  351 (354)
Q Consensus       313 ~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~  351 (354)
                      +.++.+.+.....+.++++++++|++.+.+++. +|+|++
T Consensus       290 ~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvv~  329 (329)
T cd08250         290 YQRGKLVCEVDPTRFRGLESVADAVDYLYSGKNIGKVVVE  329 (329)
T ss_pred             HHCCCeeeeECCccccCHHHHHHHHHHHHcCCCCceEEeC
Confidence            999977664334566899999999999987765 577763

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=8.2e-38  Score=280.10  Aligned_cols=296  Identities=26%  Similarity=0.431  Sum_probs=242.5

Q ss_pred             cceeeeccCCC-ceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 018529           11 CKAAVAWEAGK-PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG   89 (354)
Q Consensus        11 ~~a~~~~~~~~-~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~G   89 (354)
                      |||++++++++ .+++.+++.|++.++||+|||.++++|++|+....+.......|.++|+|++|+|+.+|++++.|++|
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~V~v~~~~l~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G   80 (306)
T cd08258           1 MKALVKTGPGPGNVELREVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYDPVETPVVLGHEFSGTIVEVGPDVEGWKVG   80 (306)
T ss_pred             CeeEEEecCCCCceEEeecCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCcCCCCeeeccceEEEEEEECCCcCcCCCC
Confidence            57888887553 49999999999999999999999999999998877754333457889999999999999999999999


Q ss_pred             CEEEeccc-CCCCCCcccccCCC-CCC---cccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhh
Q 018529           90 DHVLPVFT-GECGDCRHCRFSIN-GEP---VNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNV  164 (354)
Q Consensus        90 d~V~~~~~-~~~~~c~~c~~~~~-~~~---~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~  164 (354)
                      |+|++.+. .+|++|++|..+.. .+.   .++....|+|++|+.++.+.++++|+++++++++ +..++.++|+++...
T Consensus        81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa-~~~~~~~a~~~l~~~  159 (306)
T cd08258          81 DRVVSETTFSTCGRCPYCRRGDYNLCPHRKGIGTQADGGFAEYVLVPEESLHELPENLSLEAAA-LTEPLAVAVHAVAER  159 (306)
T ss_pred             CEEEEccCcCCCCCCcchhCcCcccCCCCceeeecCCCceEEEEEcchHHeEECcCCCCHHHHH-hhchHHHHHHHHHHh
Confidence            99998875 68999999965432 221   1222335899999999999999999999999887 666888999998888


Q ss_pred             cCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEE--cCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC-Ccc
Q 018529          165 AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGV--DRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVD  241 (354)
Q Consensus       165 ~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v--~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~~d  241 (354)
                      ++++++++|||.|+|.+|.+++|+|+.+|+ +|+++  ++++++.++++++|++.+ ++...+  +.+.+.++..+ ++|
T Consensus       160 ~~~~~g~~vlI~g~g~~g~~~~~la~~~G~-~v~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~--~~~~l~~~~~~~~vd  235 (306)
T cd08258         160 SGIRPGDTVVVFGPGPIGLLAAQVAKLQGA-TVVVVGTEKDEVRLDVAKELGADAV-NGGEED--LAELVNEITDGDGAD  235 (306)
T ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEECCCCCHHHHHHHHHhCCccc-CCCcCC--HHHHHHHHcCCCCCC
Confidence            899999999998889999999999999999 67665  345668888899999877 766554  77778877766 899


Q ss_pred             EEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhh-ccccEEEEEeccCCCCCCCHHHHHHHHHcc
Q 018529          242 RSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFFGNYKPRTDLPSVVDMYMNK  316 (354)
Q Consensus       242 vv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~  316 (354)
                      ++||+.|+...+...+++++++ |+++.+|.... ....+....+ .+++++.|++++.   +++++++++++++|
T Consensus       236 ~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~~~~~~  306 (306)
T cd08258         236 VVIECSGAVPALEQALELLRKG-GRIVQVGIFGP-LAASIDVERIIQKELSVIGSRSST---PASWETALRLLASG  306 (306)
T ss_pred             EEEECCCChHHHHHHHHHhhcC-CEEEEEcccCC-CCcccCHHHHhhcCcEEEEEecCc---hHhHHHHHHHHhcC
Confidence            9999998767889999999997 99999998652 2233333333 4999999988644   36799999998765

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=100.00  E-value=1.2e-38  Score=284.69  Aligned_cols=302  Identities=28%  Similarity=0.430  Sum_probs=228.7

Q ss_pred             eEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCC----CCCcccccceeEE---EEEeC-CCCCCCCCCCEEEe
Q 018529           23 LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTP----LFPRIFGHEAAGV---VESVG-EGVSDLEVGDHVLP   94 (354)
Q Consensus        23 l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~----~~p~~~G~e~~G~---V~~vG-~~~~~~~~Gd~V~~   94 (354)
                      +...+.++|.|++++++|++.++++|+.|+.+..|.....    .+|.+++.++.|.   +...| ..+..+..||.+..
T Consensus        20 ~~~~~~~iP~~~~~~~~i~~~a~a~NpiD~~~~~g~~~~~~~~~~~p~ii~~~g~~~~~~~~~~g~~~~~~~~~g~~~~~   99 (347)
T KOG1198|consen   20 LFSEEVPIPEPEDGEVLIKVVAVALNPIDLKIRNGYYSPIPLGREFPGIIGRDGSGVVGAVESVGDDVVGGWVHGDAVVA   99 (347)
T ss_pred             EEeecccCCCCCCCceEEEEEEeccChHHHHHHccCcCCCCCccCCCCccccccCCceeEEeccccccccceEeeeEEee
Confidence            5567899999999999999999999999999999877553    3675555555554   33334 22234555655543


Q ss_pred             cccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhc------CCC
Q 018529           95 VFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVA------KPE  168 (354)
Q Consensus        95 ~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~------~~~  168 (354)
                      .                       ...|+|+||+.+|+..++++|+++++++||++++++.|||.+++...      +++
T Consensus       100 ~-----------------------~~~g~~aey~v~p~~~~~~~P~~l~~~~aa~~p~~~~tA~~al~~~~~~~~~~~~~  156 (347)
T KOG1198|consen  100 F-----------------------LSSGGLAEYVVVPEKLLVKIPESLSFEEAAALPLAALTALSALFQLAPGKRSKKLS  156 (347)
T ss_pred             c-----------------------cCCCceeeEEEcchhhccCCCCccChhhhhcCchHHHHHHHHHHhccccccccccC
Confidence            3                       35689999999999999999999999999999999999999999988      899


Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcc
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  247 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~  247 (354)
                      +|++|||+|+ |++|++++|+|++.|+ ..+++.+++++.++++++|+++++||++.+  +.+++++.++++||+||||+
T Consensus       157 ~g~~vLv~ggsggVG~~aiQlAk~~~~-~~v~t~~s~e~~~l~k~lGAd~vvdy~~~~--~~e~~kk~~~~~~DvVlD~v  233 (347)
T KOG1198|consen  157 KGKSVLVLGGSGGVGTAAIQLAKHAGA-IKVVTACSKEKLELVKKLGADEVVDYKDEN--VVELIKKYTGKGVDVVLDCV  233 (347)
T ss_pred             CCCeEEEEeCCcHHHHHHHHHHHhcCC-cEEEEEcccchHHHHHHcCCcEeecCCCHH--HHHHHHhhcCCCccEEEECC
Confidence            9999999976 9999999999999996 555666999999999999999999999965  99999998844999999999


Q ss_pred             cChHhHHHHHHHhhCCCceEEEEcCCCCC-ceeecchhh-hccc-----cEEEEEecc---CCCCCCCHHHHHHHHHccC
Q 018529          248 GNIDNMISAFECVHDGWGVAVLVGVPSKD-AVFMTKPIN-VLNE-----RTLKGTFFG---NYKPRTDLPSVVDMYMNKQ  317 (354)
Q Consensus       248 g~~~~~~~~~~~l~~~~g~~v~~g~~~~~-~~~~~~~~~-~~~~-----~~i~g~~~~---~~~~~~~~~~~~~~~~~~~  317 (354)
                      |+ ........++... |+...++...+. ......... ..+.     ..+.+..+.   .....+.++.+.++++.+ 
T Consensus       234 g~-~~~~~~~~~l~~~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ie~g-  310 (347)
T KOG1198|consen  234 GG-STLTKSLSCLLKG-GGGAYIGLVGDELANYKLDDLWQSANGIKLYSLGLKGVNYRWLYFVPSAEYLKALVELIEKG-  310 (347)
T ss_pred             CC-CccccchhhhccC-CceEEEEeccccccccccccchhhhhhhhheeeeeeccceeeeeecCCHHHHHHHHHHHHcC-
Confidence            99 4777777888776 654444433211 111111000 0111     111111110   112235678899999999 


Q ss_pred             CCCCCceeeeeccccHHHHHHHHhcCCc-eeEEEecCC
Q 018529          318 LELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISMED  354 (354)
Q Consensus       318 ~~~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~~~d  354 (354)
                       ++.+.+.+.||++++.+|++.+.+++. +|+|+.+.+
T Consensus       311 -kikp~i~~~~p~~~~~ea~~~~~~~~~~GK~vl~~~~  347 (347)
T KOG1198|consen  311 -KIKPVIDSVYPFSQAKEAFEKLEKSHATGKVVLEKDV  347 (347)
T ss_pred             -cccCCcceeeeHHHHHHHHHHHhhcCCcceEEEEecC
Confidence             455558899999999999999988664 799988753

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-37  Score=281.84  Aligned_cols=314  Identities=20%  Similarity=0.276  Sum_probs=254.4

Q ss_pred             hcceeeeccCCCc--eEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCC-CCCCcccccceeEEEEEeCCCCCCC
Q 018529           10 TCKAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDL   86 (354)
Q Consensus        10 ~~~a~~~~~~~~~--l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~~~~~   86 (354)
                      ||||+++.+++..  +++.+.+.|++.++||+|||.++++|+.|+....+..+. ...|.++|||++|+|+++|++++++
T Consensus         1 ~m~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~   80 (334)
T PTZ00354          1 MMRAVTLKGFGGVDVLKIGESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPPPPGSSEILGLEVAGYVEDVGSDVKRF   80 (334)
T ss_pred             CcEEEEEEecCCCcceEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccceeeEEEEEEeCCCCCCC
Confidence            6999999988763  777788888889999999999999999999888764432 3346789999999999999999999


Q ss_pred             CCCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhcC
Q 018529           87 EVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK  166 (354)
Q Consensus        87 ~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~~  166 (354)
                      ++||+|+++                       ...|+|++|++++.+.++++|+++++.+++.+++++.+||+++.....
T Consensus        81 ~~Gd~V~~~-----------------------~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~l~~~~~  137 (334)
T PTZ00354         81 KEGDRVMAL-----------------------LPGGGYAEYAVAHKGHVMHIPQGYTFEEAAAIPEAFLTAWQLLKKHGD  137 (334)
T ss_pred             CCCCEEEEe-----------------------cCCCceeeEEEecHHHcEeCCCCCCHHHHHHHHHHHHHHHHHHHHhcC
Confidence            999999865                       134799999999999999999999999999999999999999877788


Q ss_pred             CCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC-CccEEE
Q 018529          167 PERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSV  244 (354)
Q Consensus       167 ~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~~dvv~  244 (354)
                      ++++++|+|+|+ |++|++++++|+.+|+ .++.+++++++.++++++|++.+++....+ .+.+.+.+.+++ ++|++|
T Consensus       138 ~~~~~~vlI~ga~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~d~~i  215 (334)
T PTZ00354        138 VKKGQSVLIHAGASGVGTAAAQLAEKYGA-ATIITTSSEEKVDFCKKLAAIILIRYPDEE-GFAPKVKKLTGEKGVNLVL  215 (334)
T ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEecCChh-HHHHHHHHHhCCCCceEEE
Confidence            999999999986 9999999999999999 666788999999999999998888765432 266777777766 899999


Q ss_pred             EcccChHhHHHHHHHhhCCCceEEEEcCCCCCceee-cchhhh-ccccEEEEEeccCCCCC-------CCHHHHHHHHHc
Q 018529          245 ECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFM-TKPINV-LNERTLKGTFFGNYKPR-------TDLPSVVDMYMN  315 (354)
Q Consensus       245 d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~-~~~~~~-~~~~~i~g~~~~~~~~~-------~~~~~~~~~~~~  315 (354)
                      |++|+ ..+..++++++++ |+++.++.... .... +....+ .++.++.++........       +.++++++++.+
T Consensus       216 ~~~~~-~~~~~~~~~l~~~-g~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  292 (334)
T PTZ00354        216 DCVGG-SYLSETAEVLAVD-GKWIVYGFMGG-AKVEKFNLLPLLRKRASIIFSTLRSRSDEYKADLVASFEREVLPYMEE  292 (334)
T ss_pred             ECCch-HHHHHHHHHhccC-CeEEEEecCCC-CcccccCHHHHHhhCCEEEeeeccccchhhhHHHHHHHHHHHHHHHHC
Confidence            99987 7889999999997 99999986432 2211 332222 35668877665432211       113667788888


Q ss_pred             cCCCCCCceeeeeccccHHHHHHHHhcCCc-eeEEEecC
Q 018529          316 KQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISME  353 (354)
Q Consensus       316 ~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~~~  353 (354)
                      +.+.+.  +.+.+++++++++++.+.+++. +|+|+.+.
T Consensus       293 ~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~kvvv~~~  329 (334)
T PTZ00354        293 GEIKPI--VDRTYPLEEVAEAHTFLEQNKNIGKVVLTVN  329 (334)
T ss_pred             CCccCc--cccEEcHHHHHHHHHHHHhCCCCceEEEecC
Confidence            876543  5688999999999999987764 68888764

>cd08249 enoyl_reductase_like enoyl_reductase_like

Probab=100.00  E-value=1.2e-37  Score=283.27  Aligned_cols=315  Identities=23%  Similarity=0.315  Sum_probs=248.5

Q ss_pred             cceeeeccCC-CceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 018529           11 CKAAVAWEAG-KPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG   89 (354)
Q Consensus        11 ~~a~~~~~~~-~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~G   89 (354)
                      |||+++..++ ..+++.+.+.|+|+++||+|++.++++|++|+....+.. ....|.++|||++|+|+.+|++++.|++|
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~-~~~~~~~~g~e~~G~v~~vG~~v~~~~~G   79 (339)
T cd08249           1 QKAAVLTGPGGGLLVVVDVPVPKPGPDEVLVKVKAVALNPVDWKHQDYGF-IPSYPAILGCDFAGTVVEVGSGVTRFKVG   79 (339)
T ss_pred             CceEEeccCCCCcccccCCCCCCCCCCEEEEEEEEEEcCchheeeeeccc-ccCCCceeeeeeeEEEEEeCCCcCcCCCC
Confidence            7899999884 338899999999999999999999999999998765533 12347789999999999999999999999


Q ss_pred             CEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhcCC--
Q 018529           90 DHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKP--  167 (354)
Q Consensus        90 d~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~~~--  167 (354)
                      |+|++.+...|+               +....|+|++|+.++.+.++++|+++++.+++.+++++.+||+++.+..++  
T Consensus        80 d~V~~~~~~~~~---------------~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~  144 (339)
T cd08249          80 DRVAGFVHGGNP---------------NDPRNGAFQEYVVADADLTAKIPDNISFEEAATLPVGLVTAALALFQKLGLPL  144 (339)
T ss_pred             CEEEEEeccccC---------------CCCCCCcccceEEechhheEECCCCCCHHHceecchHHHHHHHHHhccccCCC
Confidence            999987543322               123468999999999999999999999999999999999999997666544  


Q ss_pred             --------CCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC
Q 018529          168 --------ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG  238 (354)
Q Consensus       168 --------~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~  238 (354)
                              +++++|+|+|+ |.+|++++++|+.+|+ +|+++. ++++.+.++++|++.++++.+.+  +.+.+++++.+
T Consensus       145 ~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~a~~~G~-~v~~~~-~~~~~~~~~~~g~~~v~~~~~~~--~~~~l~~~~~~  220 (339)
T cd08249         145 PPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGY-KVITTA-SPKNFDLVKSLGADAVFDYHDPD--VVEDIRAATGG  220 (339)
T ss_pred             CCCCCCCCCCCCEEEEEcChhHHHHHHHHHHHHcCC-eEEEEE-CcccHHHHHhcCCCEEEECCCch--HHHHHHHhcCC
Confidence                    78999999997 9999999999999999 777776 56888999999999888886654  77778877767


Q ss_pred             CccEEEEcccChHhHHHHHHHhhC--CCceEEEEcCCCCCceeecchhhhccccEEEEEeccC------CCCCCCHHHHH
Q 018529          239 GVDRSVECTGNIDNMISAFECVHD--GWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGN------YKPRTDLPSVV  310 (354)
Q Consensus       239 ~~dvv~d~~g~~~~~~~~~~~l~~--~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~------~~~~~~~~~~~  310 (354)
                      ++|++||++|++..+..+++++++  + |+++.++......  .. .. ......+.......      ......++.++
T Consensus       221 ~~d~vl~~~g~~~~~~~~~~~l~~~~~-g~~v~~g~~~~~~--~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (339)
T cd08249         221 KLRYALDCISTPESAQLCAEALGRSGG-GKLVSLLPVPEET--EP-RK-GVKVKFVLGYTVFGEIPEDREFGEVFWKYLP  295 (339)
T ss_pred             CeeEEEEeeccchHHHHHHHHHhccCC-CEEEEecCCCccc--cC-CC-CceEEEEEeeeecccccccccchHHHHHHHH
Confidence            899999999986789999999999  8 9999998664221  00 00 01111112221110      01112466788


Q ss_pred             HHHHccCCCCCCceeeeec--cccHHHHHHHHhcCC-c-eeEEEec
Q 018529          311 DMYMNKQLELEKFITHRIP--FSEINKAFEYMVKGE-G-LRCIISM  352 (354)
Q Consensus       311 ~~~~~~~~~~~~~v~~~~~--l~~~~~a~~~~~~~~-~-~k~vi~~  352 (354)
                      +++.++++.+.+  ...++  ++++++||+.+..++ . +|+|+++
T Consensus       296 ~~~~~~~l~~~~--~~~~~~~~~~~~~a~~~~~~~~~~~~kvvv~~  339 (339)
T cd08249         296 ELLEEGKLKPHP--VRVVEGGLEGVQEGLDLLRKGKVSGEKLVVRL  339 (339)
T ss_pred             HHHHcCCccCCC--ceecCCcHHHHHHHHHHHHCCCccceEEEEeC
Confidence            899999877653  34566  999999999998877 5 6888864

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de

>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases

Probab=100.00  E-value=3e-37  Score=279.22  Aligned_cols=312  Identities=19%  Similarity=0.236  Sum_probs=242.3

Q ss_pred             cceeeeccCCC--ceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCC-CCCCcccccceeEEEEEeCCCCCCCC
Q 018529           11 CKAAVAWEAGK--PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLE   87 (354)
Q Consensus        11 ~~a~~~~~~~~--~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~~~~~~   87 (354)
                      |||+++.+++.  ++++.+.|.|.++++||+|++.++++|++|+....|..+. ..+|.++|||++|+|+++  +++.|+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~--~~~~~~   78 (325)
T cd05280           1 FKALVVEEQDGGVSLFLRTLPLDDLPEGDVLIRVHYSSLNYKDALAATGNGGVTRNYPHTPGIDAAGTVVSS--DDPRFR   78 (325)
T ss_pred             CceEEEcccCCCCcceEEeCCCCCCCCCeEEEEEEEeecChHHHHHhcCCCCCCCCCCCccCcccEEEEEEe--CCCCCC
Confidence            78999999886  5999999999999999999999999999999988775432 345788999999999998  456799


Q ss_pred             CCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhc--
Q 018529           88 VGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVA--  165 (354)
Q Consensus        88 ~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~--  165 (354)
                      +||+|++...                 ..+....|+|++|+.++++.++++|+++++.+++.+++.+.++|+++....  
T Consensus        79 ~Gd~V~~~~~-----------------~~g~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~  141 (325)
T cd05280          79 EGDEVLVTGY-----------------DLGMNTDGGFAEYVRVPADWVVPLPEGLSLREAMILGTAGFTAALSVHRLEDN  141 (325)
T ss_pred             CCCEEEEccc-----------------ccCCCCCceeEEEEEEchhhEEECCCCCCHHHHHhhHHHHHHHHHHHHHHhhc
Confidence            9999987521                 011223589999999999999999999999999999999999999875443  


Q ss_pred             CCC-CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEE
Q 018529          166 KPE-RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRS  243 (354)
Q Consensus       166 ~~~-~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv  243 (354)
                      ++. .+++|+|+|+ |.+|++++++|+.+|+ +|+++++++++.+.++++|++.+++..+.   ..+..+....+++|+|
T Consensus       142 ~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~~~~~~~~~~~d~v  217 (325)
T cd05280         142 GQTPEDGPVLVTGATGGVGSIAVAILAKLGY-TVVALTGKEEQADYLKSLGASEVLDREDL---LDESKKPLLKARWAGA  217 (325)
T ss_pred             cCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEEEcchhH---HHHHHHHhcCCCccEE
Confidence            335 3579999997 9999999999999999 79999999999999999999888876432   1122333333489999


Q ss_pred             EEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhh-ccccEEEEEeccCCCCCCCHHH----HHHHHHccCC
Q 018529          244 VECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFFGNYKPRTDLPS----VVDMYMNKQL  318 (354)
Q Consensus       244 ~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~~~~~~~~~----~~~~~~~~~~  318 (354)
                      ||++|+ ..+..++++++++ |+++.+|....... ......+ .+++++.+....... .+...+    +.+++..+  
T Consensus       218 i~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~--  291 (325)
T cd05280         218 IDTVGG-DVLANLLKQTKYG-GVVASCGNAAGPEL-TTTVLPFILRGVSLLGIDSVNCP-MELRKQVWQKLATEWKPD--  291 (325)
T ss_pred             EECCch-HHHHHHHHhhcCC-CEEEEEecCCCCcc-ccccchheeeeeEEEEEEeecCc-hhHHHHHHHHHHHHHhcC--
Confidence            999998 6889999999997 99999987543221 2333334 588888886654321 122323    33333444  


Q ss_pred             CCCCceeeeeccccHHHHHHHHhcCCc-eeEEEec
Q 018529          319 ELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM  352 (354)
Q Consensus       319 ~~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~~  352 (354)
                       ....+..+|++++++++++.+.+++. +|+|+++
T Consensus       292 -~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  325 (325)
T cd05280         292 -LLEIVVREISLEELPEAIDRLLAGKHRGRTVVKI  325 (325)
T ss_pred             -CccceeeEecHHHHHHHHHHHhcCCcceEEEEeC
Confidence             22236789999999999999988775 5888764

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so

>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=3.7e-37  Score=276.19  Aligned_cols=298  Identities=24%  Similarity=0.299  Sum_probs=241.7

Q ss_pred             cceeeeccCCC-ceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 018529           11 CKAAVAWEAGK-PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG   89 (354)
Q Consensus        11 ~~a~~~~~~~~-~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~G   89 (354)
                      ||++++.+.+. .+++.+.+.|.++++||+||+.++++|+.|+.....    ...|.++|||++|+|+++|+++..|++|
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~p~~~~~ev~v~v~~~~i~~~d~~~~~~----~~~~~~~g~e~~G~v~~~G~~v~~~~~G   76 (305)
T cd08270           1 MRALVVDPDAPLRLRLGEVPDPQPAPHEALVRVAAISLNRGELKFAAE----RPDGAVPGWDAAGVVERAAADGSGPAVG   76 (305)
T ss_pred             CeEEEEccCCCceeEEEecCCCCCCCCEEEEEEEEEecCHHHHHhhcc----CCCCCcccceeEEEEEEeCCCCCCCCCC
Confidence            68888887541 277778899999999999999999999999987642    2236789999999999999999999999


Q ss_pred             CEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhcCCCC
Q 018529           90 DHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPER  169 (354)
Q Consensus        90 d~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~  169 (354)
                      |+|++.                       ...|+|++|+.++++.++++|+++++.+++++++.+.+||+++...... +
T Consensus        77 d~V~~~-----------------------~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~~~~~~~~-~  132 (305)
T cd08270          77 ARVVGL-----------------------GAMGAWAELVAVPTGWLAVLPDGVSFAQAATLPVAGVTALRALRRGGPL-L  132 (305)
T ss_pred             CEEEEe-----------------------cCCcceeeEEEEchHHeEECCCCCCHHHHHHhHhHHHHHHHHHHHhCCC-C
Confidence            999865                       1258999999999999999999999999999999999999997655544 5


Q ss_pred             CCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEccc
Q 018529          170 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  248 (354)
Q Consensus       170 ~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g  248 (354)
                      |++|+|+|+ |++|.+++++|+..|+ +|+++++++++.+.++++|++.+++....          +.++++|+++|++|
T Consensus       133 ~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~----------~~~~~~d~vl~~~g  201 (305)
T cd08270         133 GRRVLVTGASGGVGRFAVQLAALAGA-HVVAVVGSPARAEGLRELGAAEVVVGGSE----------LSGAPVDLVVDSVG  201 (305)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEecccc----------ccCCCceEEEECCC
Confidence            999999998 9999999999999999 89999999999999999998765543221          12247999999999


Q ss_pred             ChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhhc---cccEEEEEeccC-CCCCCCHHHHHHHHHccCCCCCCce
Q 018529          249 NIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL---NERTLKGTFFGN-YKPRTDLPSVVDMYMNKQLELEKFI  324 (354)
Q Consensus       249 ~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~---~~~~i~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v  324 (354)
                      + ..+..++++++.+ |+++.+|... .....+....+.   ++.++.++.+.. ....+.+..+++++.++++.+.  +
T Consensus       202 ~-~~~~~~~~~l~~~-G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~  276 (305)
T cd08270         202 G-PQLARALELLAPG-GTVVSVGSSS-GEPAVFNPAAFVGGGGGRRLYTFFLYDGEPLAADLARLLGLVAAGRLDPR--I  276 (305)
T ss_pred             c-HHHHHHHHHhcCC-CEEEEEeccC-CCcccccHHHHhcccccceEEEEEccCHHHHHHHHHHHHHHHHCCCccce--e
Confidence            8 5789999999997 9999998654 222223333333   478888877543 1112357788899999988754  6


Q ss_pred             eeeeccccHHHHHHHHhcCCc-eeEEEec
Q 018529          325 THRIPFSEINKAFEYMVKGEG-LRCIISM  352 (354)
Q Consensus       325 ~~~~~l~~~~~a~~~~~~~~~-~k~vi~~  352 (354)
                      .+.++++++++|++.+.+++. +|+|++|
T Consensus       277 ~~~~~~~~~~~a~~~~~~~~~~gkvvi~~  305 (305)
T cd08270         277 GWRGSWTEIDEAAEALLARRFRGKAVLDV  305 (305)
T ss_pred             ccEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence            688999999999999987765 5888864

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=100.00  E-value=2.5e-37  Score=258.79  Aligned_cols=298  Identities=18%  Similarity=0.252  Sum_probs=243.5

Q ss_pred             eEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeC--CCCCCCCCCCEEEecccCCC
Q 018529           23 LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVG--EGVSDLEVGDHVLPVFTGEC  100 (354)
Q Consensus        23 l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG--~~~~~~~~Gd~V~~~~~~~~  100 (354)
                      ++++++++|+|++||||+|..|.++++...- +.+..+..-.|+-+|-.++|.++...  |..++|++||.|...     
T Consensus        27 F~lee~~vp~p~~GqvLl~~~ylS~DPymRg-rm~d~~SY~~P~~lG~~~~gg~V~~Vv~S~~~~f~~GD~V~~~-----  100 (340)
T COG2130          27 FRLEEVDVPEPGEGQVLLRTLYLSLDPYMRG-RMSDAPSYAPPVELGEVMVGGTVAKVVASNHPGFQPGDIVVGV-----  100 (340)
T ss_pred             ceeEeccCCCCCcCceEEEEEEeccCHHHee-cccCCcccCCCcCCCceeECCeeEEEEecCCCCCCCCCEEEec-----
Confidence            9999999999999999999999999884332 22223344567888887776544433  557789999999855     


Q ss_pred             CCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccc--hhhcccchhhhhhhhhhhcCCCCCCeEEEEcC
Q 018529          101 GDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDK--VCILSCGVSTGLGATLNVAKPERGSSVAVFGL  178 (354)
Q Consensus       101 ~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~--aa~l~~~~~~a~~~l~~~~~~~~~~~vlI~G~  178 (354)
                                           .+|+||..++.+.+.+++++.-+..  ...|..+..|||.+|.+.+.+++|++|+|.||
T Consensus       101 ---------------------~GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLGmpG~TAY~gLl~igqpk~GetvvVSaA  159 (340)
T COG2130         101 ---------------------SGWQEYAISDGEGLRKLDPSPAPLSAYLGVLGMPGLTAYFGLLDIGQPKAGETVVVSAA  159 (340)
T ss_pred             ---------------------ccceEEEeechhhceecCCCCCCcchHHhhcCCchHHHHHHHHHhcCCCCCCEEEEEec
Confidence                                 4899999999999999986543222  23367899999999999999999999999987


Q ss_pred             -ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh-cCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcccChHhHHHH
Q 018529          179 -GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISA  256 (354)
Q Consensus       179 -g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~-lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~~~~~~~~  256 (354)
                       |++|..+.|+||..|+ +|+++..++||.+++.+ +|+|.++||+..+  +.+++++..+.|.|+.||++|+ +.++..
T Consensus       160 aGaVGsvvgQiAKlkG~-rVVGiaGg~eK~~~l~~~lGfD~~idyk~~d--~~~~L~~a~P~GIDvyfeNVGg-~v~DAv  235 (340)
T COG2130         160 AGAVGSVVGQIAKLKGC-RVVGIAGGAEKCDFLTEELGFDAGIDYKAED--FAQALKEACPKGIDVYFENVGG-EVLDAV  235 (340)
T ss_pred             ccccchHHHHHHHhhCC-eEEEecCCHHHHHHHHHhcCCceeeecCccc--HHHHHHHHCCCCeEEEEEcCCc-hHHHHH
Confidence             9999999999999999 99999999999999988 9999999999986  9999999998899999999999 899999


Q ss_pred             HHHhhCCCceEEEEcCCCCC--c----eeecchhhhccccEEEEEeccC-CCCC--CCHHHHHHHHHccCCCCCCceeee
Q 018529          257 FECVHDGWGVAVLVGVPSKD--A----VFMTKPINVLNERTLKGTFFGN-YKPR--TDLPSVVDMYMNKQLELEKFITHR  327 (354)
Q Consensus       257 ~~~l~~~~g~~v~~g~~~~~--~----~~~~~~~~~~~~~~i~g~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~v~~~  327 (354)
                      +..|+.. +|+..||..+.-  .    .....+..+.+.+++.|+...+ +..+  +.++++.+++.+|+|+.++  +-+
T Consensus       236 ~~~ln~~-aRi~~CG~IS~YN~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~~~~~~~e~~~~l~~wv~~GKi~~~e--ti~  312 (340)
T COG2130         236 LPLLNLF-ARIPVCGAISQYNAPELPPGPRRLPLLMAKRLRVQGFIVASDYDQRFPEALRELGGWVKEGKIQYRE--TIV  312 (340)
T ss_pred             HHhhccc-cceeeeeehhhcCCCCCCCCcchhhHHHhhhheeEEEEechhhhhhhHHHHHHHHHHHHcCceeeEe--eeh
Confidence            9999997 999999975421  1    1111222234789999987732 2222  4577899999999998875  345


Q ss_pred             eccccHHHHHHHHhcCCc-eeEEEecCC
Q 018529          328 IPFSEINKAFEYMVKGEG-LRCIISMED  354 (354)
Q Consensus       328 ~~l~~~~~a~~~~~~~~~-~k~vi~~~d  354 (354)
                      -+|+.+++||.-+.++++ +|+|+.+.|
T Consensus       313 dGlEnaP~Af~gLl~G~N~GK~vvKv~~  340 (340)
T COG2130         313 DGLENAPEAFIGLLSGKNFGKLVVKVAD  340 (340)
T ss_pred             hhhhccHHHHHHHhcCCccceEEEEecC
Confidence            579999999999999987 699998865

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=100.00  E-value=6.6e-37  Score=276.72  Aligned_cols=298  Identities=22%  Similarity=0.334  Sum_probs=249.0

Q ss_pred             eEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCC-CCCCcccccceeEEEEEeCCCCCCCCCCCEEEecccCCCC
Q 018529           23 LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECG  101 (354)
Q Consensus        23 l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~~  101 (354)
                      +++++.+.|++.+++|+|||.++++|+.|+..+.+.... ..+|.++|||++|+|+.+|++++.+++||+|++.+     
T Consensus        14 ~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~-----   88 (323)
T cd05282          14 LELVSLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGSRPPLPAVPGNEGVGVVVEVGSGVSGLLVGQRVLPLG-----   88 (323)
T ss_pred             EEeEeCCCCCCCCCeEEEEEEeccCCHHHHHHhcCcCCCCCCCCCcCCcceEEEEEEeCCCCCCCCCCCEEEEeC-----
Confidence            667788888899999999999999999999887765432 34578999999999999999999999999999752     


Q ss_pred             CCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhcCCCCCCeEEEEcC-Ch
Q 018529          102 DCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GA  180 (354)
Q Consensus       102 ~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vlI~G~-g~  180 (354)
                                        ..|+|++|+.++.+.++++|+++++.+++.+++.+.+||+++.....+.++++|||+|+ |.
T Consensus        89 ------------------~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~ta~~~~~~~~~~~~~~~vlI~g~~~~  150 (323)
T cd05282          89 ------------------GEGTWQEYVVAPADDLIPVPDSISDEQAAMLYINPLTAWLMLTEYLKLPPGDWVIQNAANSA  150 (323)
T ss_pred             ------------------CCCcceeEEecCHHHeEECCCCCCHHHHHHHhccHHHHHHHHHHhccCCCCCEEEEcccccH
Confidence                              14799999999999999999999999999999999999999877788899999999987 99


Q ss_pred             hHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC-CccEEEEcccChHhHHHHHHH
Q 018529          181 VGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFEC  259 (354)
Q Consensus       181 ~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~~dvv~d~~g~~~~~~~~~~~  259 (354)
                      +|++++++|+.+|+ .++++.+++++.+.++++|++.++++.+.+  +.+.+.+++++ ++|++||++|+ ......+++
T Consensus       151 vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~d~vl~~~g~-~~~~~~~~~  226 (323)
T cd05282         151 VGRMLIQLAKLLGF-KTINVVRRDEQVEELKALGADEVIDSSPED--LAQRVKEATGGAGARLALDAVGG-ESATRLARS  226 (323)
T ss_pred             HHHHHHHHHHHCCC-eEEEEecChHHHHHHHhcCCCEEecccchh--HHHHHHHHhcCCCceEEEECCCC-HHHHHHHHh
Confidence            99999999999999 788888999999999999999988876644  77778888877 99999999998 556788999


Q ss_pred             hhCCCceEEEEcCCCCCceeecchhhhc-cccEEEEEeccCCCC-------CCCHHHHHHHHHccCCCCCCceeeeeccc
Q 018529          260 VHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTFFGNYKP-------RTDLPSVVDMYMNKQLELEKFITHRIPFS  331 (354)
Q Consensus       260 l~~~~g~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~v~~~~~l~  331 (354)
                      ++++ |+++.+|..... ...+....+. ++.++.+.....+..       .+.++++++++.++++.+.  ..+.|+++
T Consensus       227 l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~--~~~~~~~~  302 (323)
T cd05282         227 LRPG-GTLVNYGLLSGE-PVPFPRSVFIFKDITVRGFWLRQWLHSATKEAKQETFAEVIKLVEAGVLTTP--VGAKFPLE  302 (323)
T ss_pred             hCCC-CEEEEEccCCCC-CCCCCHHHHhhcCceEEEEEehHhhccCCHHHHHHHHHHHHHHHhCCCcccC--ccceecHH
Confidence            9997 999999876533 2334444444 788888877654321       1246778888888876643  57889999


Q ss_pred             cHHHHHHHHhcCCc-eeEEEe
Q 018529          332 EINKAFEYMVKGEG-LRCIIS  351 (354)
Q Consensus       332 ~~~~a~~~~~~~~~-~k~vi~  351 (354)
                      ++.+||+.+.+++. +|+|++
T Consensus       303 ~~~~a~~~~~~~~~~~kvv~~  323 (323)
T cd05282         303 DFEEAVAAAEQPGRGGKVLLT  323 (323)
T ss_pred             HHHHHHHHHhcCCCCceEeeC
Confidence            99999999987765 577763

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.5e-36  Score=272.99  Aligned_cols=301  Identities=25%  Similarity=0.366  Sum_probs=242.9

Q ss_pred             cCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhh-ccCCCC--CCCCcccccceeEEEEEeCCCCCCCCCCCEEEe
Q 018529           18 EAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFW-ESKGQT--PLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLP   94 (354)
Q Consensus        18 ~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~-~~~~~~--~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~   94 (354)
                      +.++ +++.+++.|+++++||+|++.++++|++|+... .+....  ...|.++|+|++|+|+.+|++++++++||+|++
T Consensus         3 ~~~~-~~~~~~~~~~l~~~ev~v~v~~~~i~~~d~~~~~~g~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~   81 (312)
T cd08269           3 GPGR-FEVEEHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGRVVALGPGVRGLAVGDRVAG   81 (312)
T ss_pred             CCCe-eEEEECCCCCCCCCeEEEEEEEeeecccchHHHccCCCCcccCCCCcccceeeEEEEEEECCCCcCCCCCCEEEE
Confidence            4444 899999999999999999999999999999877 554321  224778999999999999999999999999986


Q ss_pred             cccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhcCCCCCCeEE
Q 018529           95 VFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVA  174 (354)
Q Consensus        95 ~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vl  174 (354)
                      .                        ..|+|++|+.++++.++++|+++  ..++.+..+++++|+++. ..+++++++|+
T Consensus        82 ~------------------------~~g~~~~~~~v~~~~~~~lP~~~--~~~~~~~~~~~~a~~~~~-~~~~~~~~~vl  134 (312)
T cd08269          82 L------------------------SGGAFAEYDLADADHAVPLPSLL--DGQAFPGEPLGCALNVFR-RGWIRAGKTVA  134 (312)
T ss_pred             e------------------------cCCcceeeEEEchhheEECCCch--hhhHHhhhhHHHHHHHHH-hcCCCCCCEEE
Confidence            5                        34799999999999999999998  233332368889998864 78899999999


Q ss_pred             EEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC-CccEEEEcccChHhH
Q 018529          175 VFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNM  253 (354)
Q Consensus       175 I~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~~dvv~d~~g~~~~~  253 (354)
                      |+|+|.+|.+++++|+..|++.|+++++++++.++++++|++.+++....+  +.+.+.+++++ ++|+++|+.|+....
T Consensus       135 I~g~g~vg~~~~~la~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~l~~~~~~~~vd~vld~~g~~~~~  212 (312)
T cd08269         135 VIGAGFIGLLFLQLAAAAGARRVIAIDRRPARLALARELGATEVVTDDSEA--IVERVRELTGGAGADVVIEAVGHQWPL  212 (312)
T ss_pred             EECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEecCCCcC--HHHHHHHHcCCCCCCEEEECCCCHHHH
Confidence            998899999999999999994399999999999999999998888765544  77888888776 999999999887788


Q ss_pred             HHHHHHhhCCCceEEEEcCCCCCceeecchhh-hccccEEEEEeccCCC-CCCCHHHHHHHHHccCCCCCCceeeeeccc
Q 018529          254 ISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNYK-PRTDLPSVVDMYMNKQLELEKFITHRIPFS  331 (354)
Q Consensus       254 ~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~l~  331 (354)
                      ..++++++++ |+++.+|... .....+.... ..+++++.++...... ..+.++++++++.++++.+...+.+.|+++
T Consensus       213 ~~~~~~l~~~-g~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  290 (312)
T cd08269         213 DLAGELVAER-GRLVIFGYHQ-DGPRPVPFQTWNWKGIDLINAVERDPRIGLEGMREAVKLIADGRLDLGSLLTHEFPLE  290 (312)
T ss_pred             HHHHHHhccC-CEEEEEccCC-CCCcccCHHHHhhcCCEEEEecccCccchhhHHHHHHHHHHcCCCCchhheeeeecHH
Confidence            9999999997 9999998654 2222222222 3477777766533321 225688899999999877654467889999


Q ss_pred             cHHHHHHHHhcCCc--eeEEE
Q 018529          332 EINKAFEYMVKGEG--LRCII  350 (354)
Q Consensus       332 ~~~~a~~~~~~~~~--~k~vi  350 (354)
                      +++++++.+.+++.  +|.+|
T Consensus       291 ~~~~a~~~~~~~~~~~~~~~~  311 (312)
T cd08269         291 ELGDAFEAARRRPDGFIKGVI  311 (312)
T ss_pred             HHHHHHHHHHhCCCCceEEEe
Confidence            99999999988753  68776

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=100.00  E-value=1.2e-36  Score=274.46  Aligned_cols=311  Identities=24%  Similarity=0.357  Sum_probs=247.7

Q ss_pred             cceeeeccCCC--ceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCCC
Q 018529           11 CKAAVAWEAGK--PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEV   88 (354)
Q Consensus        11 ~~a~~~~~~~~--~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~   88 (354)
                      ||++.+...+.  .+++.+.+.|.++++||+||+.++++|+.|+....+..+....|.++|||++|+|+++|+  ..+++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~--~~~~~   78 (320)
T cd08243           1 MKAIVIEQPGGPEVLKLREIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSPSVKFPRVLGIEAVGEVEEAPG--GTFTP   78 (320)
T ss_pred             CeEEEEcCCCCccceEEeecCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCccccceeEEEEEEecC--CCCCC
Confidence            68888877664  267778888788999999999999999999998877554445678899999999999995  57999


Q ss_pred             CCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhcCCC
Q 018529           89 GDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPE  168 (354)
Q Consensus        89 Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~~~~  168 (354)
                      ||+|++....-                 +....|+|++|+.++++.++++|+++++++++.+++++.+||+++.+...++
T Consensus        79 Gd~V~~~~~~~-----------------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~  141 (320)
T cd08243          79 GQRVATAMGGM-----------------GRTFDGSYAEYTLVPNEQVYAIDSDLSWAELAALPETYYTAWGSLFRSLGLQ  141 (320)
T ss_pred             CCEEEEecCCC-----------------CCCCCcccceEEEcCHHHcEeCCCCCCHHHHHhcchHHHHHHHHHHHhcCCC
Confidence            99998762100                 0112489999999999999999999999999999999999999987778899


Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcc
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  247 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~  247 (354)
                      +|++|||+|+ |++|++++|+|+..|+ +|+++++++++.+.++++|++.+++. ..  ++.+.+.++ ++++|+++|++
T Consensus       142 ~g~~vlV~ga~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~-~~--~~~~~i~~~-~~~~d~vl~~~  216 (320)
T cd08243         142 PGDTLLIRGGTSSVGLAALKLAKALGA-TVTATTRSPERAALLKELGADEVVID-DG--AIAEQLRAA-PGGFDKVLELV  216 (320)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEEEec-Cc--cHHHHHHHh-CCCceEEEECC
Confidence            9999999997 9999999999999999 79999999999999999999887754 22  367777777 45899999999


Q ss_pred             cChHhHHHHHHHhhCCCceEEEEcCCCCCcee-ecch---hhhccccEEEEEeccCCCCCCCHHHHHHHHHccCCCCCCc
Q 018529          248 GNIDNMISAFECVHDGWGVAVLVGVPSKDAVF-MTKP---INVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKF  323 (354)
Q Consensus       248 g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~-~~~~---~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  323 (354)
                      |+ ..+..++++++++ |+++.+|........ ....   ..+.+++++.++...... ...++.+++++..+.+.+.  
T Consensus       217 ~~-~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~--  291 (320)
T cd08243         217 GT-ATLKDSLRHLRPG-GIVCMTGLLGGQWTLEDFNPMDDIPSGVNLTLTGSSSGDVP-QTPLQELFDFVAAGHLDIP--  291 (320)
T ss_pred             Ch-HHHHHHHHHhccC-CEEEEEccCCCCcccCCcchhhhhhhccceEEEecchhhhh-HHHHHHHHHHHHCCceecc--
Confidence            98 6889999999997 999999875322111 1111   112356677665532211 1347788899999977643  


Q ss_pred             eeeeeccccHHHHHHHHhcCCc-eeEEE
Q 018529          324 ITHRIPFSEINKAFEYMVKGEG-LRCII  350 (354)
Q Consensus       324 v~~~~~l~~~~~a~~~~~~~~~-~k~vi  350 (354)
                      ..+.|+++++++|++.+.+++. +|+|+
T Consensus       292 ~~~~~~l~~~~~a~~~~~~~~~~~kvvv  319 (320)
T cd08243         292 PSKVFTFDEIVEAHAYMESNRAFGKVVV  319 (320)
T ss_pred             cccEEcHHHHHHHHHHHHhCCCCCcEEe
Confidence            5678999999999999987765 46664

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=100.00  E-value=2.3e-36  Score=273.56  Aligned_cols=314  Identities=18%  Similarity=0.195  Sum_probs=240.2

Q ss_pred             cceeeeccCCCc--eEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCC-CCCCCCcccccceeEEEEEeCCCCCCCC
Q 018529           11 CKAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKG-QTPLFPRIFGHEAAGVVESVGEGVSDLE   87 (354)
Q Consensus        11 ~~a~~~~~~~~~--l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~-~~~~~p~~~G~e~~G~V~~vG~~~~~~~   87 (354)
                      |||+++.+++.+  +++++.+.|.|+++||+||+.++++|++|.....+.+ ....+|.++|||++|+|+++|  +++|+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~~~--~~~~~   78 (326)
T cd08289           1 FQALVVEKDEDDVSVSVKNLTLDDLPEGDVLIRVAYSSVNYKDGLASIPGGKIVKRYPFIPGIDLAGTVVESN--DPRFK   78 (326)
T ss_pred             CeeEEEeccCCcceeEEEEccCCCCCCCeEEEEEEEEecChHHhhhhcCCccccCCCCcCcccceeEEEEEcC--CCCCC
Confidence            789999988764  8889999999999999999999999999987654322 123458899999999999964  46799


Q ss_pred             CCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhh--c
Q 018529           88 VGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNV--A  165 (354)
Q Consensus        88 ~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~--~  165 (354)
                      +||+|++.+..                 .+....|+|++|+.++++.++++|+++++++++.+++++.+||+++...  .
T Consensus        79 ~Gd~V~~~~~~-----------------~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~  141 (326)
T cd08289          79 PGDEVIVTSYD-----------------LGVSHHGGYSEYARVPAEWVVPLPKGLTLKEAMILGTAGFTAALSIHRLEEN  141 (326)
T ss_pred             CCCEEEEcccc-----------------cCCCCCCcceeEEEEcHHHeEECCCCCCHHHHhhhhhHHHHHHHHHHHHHhc
Confidence            99999876320                 0112358999999999999999999999999999999999999886433  2


Q ss_pred             C-CCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEE
Q 018529          166 K-PERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRS  243 (354)
Q Consensus       166 ~-~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv  243 (354)
                      . ...+++|||+|+ |.+|.+++|+|+.+|+ +|+++++++++.++++++|++.+++..+.   ..+.+++++++++|++
T Consensus       142 ~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~~---~~~~~~~~~~~~~d~v  217 (326)
T cd08289         142 GLTPEQGPVLVTGATGGVGSLAVSILAKLGY-EVVASTGKADAADYLKKLGAKEVIPREEL---QEESIKPLEKQRWAGA  217 (326)
T ss_pred             CCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEecCHHHHHHHHHcCCCEEEcchhH---HHHHHHhhccCCcCEE
Confidence            3 345789999998 9999999999999999 89999999999999999999888876542   2445666654489999


Q ss_pred             EEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhh-ccccEEEEEeccCCCCCCCHHHHHHHHHccCCC---
Q 018529          244 VECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLE---  319 (354)
Q Consensus       244 ~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~---  319 (354)
                      ||++|+ ..+..++++++++ |+++.+|.... ...+.....+ .+++++.++...... ......+++.+.. .+.   
T Consensus       218 ld~~g~-~~~~~~~~~l~~~-G~~i~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~  292 (326)
T cd08289         218 VDPVGG-KTLAYLLSTLQYG-GSVAVSGLTGG-GEVETTVFPFILRGVNLLGIDSVECP-MELRRRIWRRLAT-DLKPTQ  292 (326)
T ss_pred             EECCcH-HHHHHHHHHhhcC-CEEEEEeecCC-CCCCcchhhhhhccceEEEEEeEecC-chHHHHHHHHHHh-hcCccc
Confidence            999998 7889999999997 99999997632 2222222333 578888887532110 1123334443332 222   


Q ss_pred             CCCceeeeeccccHHHHHHHHhcCCc-eeEEEec
Q 018529          320 LEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM  352 (354)
Q Consensus       320 ~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~~  352 (354)
                      ....+.+.|+++++.+||+.+.+++. +|+|+++
T Consensus       293 ~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~  326 (326)
T cd08289         293 LLNEIKQEITLDELPEALKQILQGRVTGRTVVKL  326 (326)
T ss_pred             cccccceEeeHHHHHHHHHHHhcCcccceEEEeC
Confidence            22345789999999999999988776 5888764

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>cd08252 AL_MDR Arginate lyase and other MDR family members

Probab=100.00  E-value=6.1e-36  Score=271.93  Aligned_cols=311  Identities=19%  Similarity=0.194  Sum_probs=249.7

Q ss_pred             cceeeeccCCCc-----eEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCC
Q 018529           11 CKAAVAWEAGKP-----LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSD   85 (354)
Q Consensus        11 ~~a~~~~~~~~~-----l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~   85 (354)
                      |||+++.+++.+     ++..+.+.|.+.+++|+|++.++++|++|+....+..+....|.++|||++|+|+.+|++++.
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~   80 (336)
T cd08252           1 MKAIGFTQPLPITDPDSLIDIELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAPVPGQPKILGWDASGVVEAVGSEVTL   80 (336)
T ss_pred             CceEEecCCCCCCcccceeEccCCCCCCCCCEEEEEEEEEEcCHHHHHHHcCCCCCCCCCcccccceEEEEEEcCCCCCC
Confidence            689999988763     556677888889999999999999999999887665443445778999999999999999999


Q ss_pred             CCCCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhc
Q 018529           86 LEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVA  165 (354)
Q Consensus        86 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~  165 (354)
                      |++||+|++...                    ....|+|++|+.++.+.++++|+++++++++.+++.+.+||+++.+.+
T Consensus        81 ~~~Gd~V~~~~~--------------------~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~  140 (336)
T cd08252          81 FKVGDEVYYAGD--------------------ITRPGSNAEYQLVDERIVGHKPKSLSFAEAAALPLTSLTAWEALFDRL  140 (336)
T ss_pred             CCCCCEEEEcCC--------------------CCCCccceEEEEEchHHeeeCCCCCCHHHhhhhhhHHHHHHHHHHHhc
Confidence            999999986410                    013489999999999999999999999999999999999999987778


Q ss_pred             CCCC-----CCeEEEEcC-ChhHHHHHHHHHHcC-CcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC
Q 018529          166 KPER-----GSSVAVFGL-GAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG  238 (354)
Q Consensus       166 ~~~~-----~~~vlI~G~-g~~G~~a~~~a~~~g-~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~  238 (354)
                      .+.+     |++|+|+|+ |++|++++++|+.+| + +|+++++++++.++++++|++.+++... +  +.+.+.....+
T Consensus       141 ~~~~~~~~~g~~vlV~g~~g~vg~~~~~~a~~~G~~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~-~--~~~~i~~~~~~  216 (336)
T cd08252         141 GISEDAENEGKTLLIIGGAGGVGSIAIQLAKQLTGL-TVIATASRPESIAWVKELGADHVINHHQ-D--LAEQLEALGIE  216 (336)
T ss_pred             CCCCCcCCCCCEEEEEcCCchHHHHHHHHHHHcCCc-EEEEEcCChhhHHHHHhcCCcEEEeCCc-c--HHHHHHhhCCC
Confidence            8887     999999986 999999999999999 7 8999999999999999999988887764 2  66666654434


Q ss_pred             CccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhh-ccccEEEEEeccCCC--CC-------CCHHH
Q 018529          239 GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFFGNYK--PR-------TDLPS  308 (354)
Q Consensus       239 ~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~~--~~-------~~~~~  308 (354)
                      ++|++||++|+...+..++++++.+ |+++.+|...  .  .+....+ .++.++.+..+....  ..       ..+++
T Consensus       217 ~~d~vl~~~~~~~~~~~~~~~l~~~-g~~v~~g~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (336)
T cd08252         217 PVDYIFCLTDTDQHWDAMAELIAPQ-GHICLIVDPQ--E--PLDLGPLKSKSASFHWEFMFTRSMFQTPDMIEQHEILNE  291 (336)
T ss_pred             CCCEEEEccCcHHHHHHHHHHhcCC-CEEEEecCCC--C--cccchhhhcccceEEEEEeeccccccccchhhHHHHHHH
Confidence            8999999999767899999999997 9999998652  1  2222233 467777775543211  11       23677


Q ss_pred             HHHHHHccCCCCCCc-eeeeeccccHHHHHHHHhcCCc-eeEEE
Q 018529          309 VVDMYMNKQLELEKF-ITHRIPFSEINKAFEYMVKGEG-LRCII  350 (354)
Q Consensus       309 ~~~~~~~~~~~~~~~-v~~~~~l~~~~~a~~~~~~~~~-~k~vi  350 (354)
                      +++++.++.+.+... ....++++++.+|++.+.+++. +|+++
T Consensus       292 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~  335 (336)
T cd08252         292 VADLLDAGKLKTTLTETLGPINAENLREAHALLESGKTIGKIVL  335 (336)
T ss_pred             HHHHHHCCCEecceeeeecCCCHHHHHHHHHHHHcCCccceEEe
Confidence            889999997765321 2245799999999999988775 47765

This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil

>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family

Probab=100.00  E-value=8.9e-36  Score=269.40  Aligned_cols=310  Identities=19%  Similarity=0.233  Sum_probs=240.6

Q ss_pred             ceeeeccCCCc--eEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCC-CCCCcccccceeEEEEEeCCCCCCCCC
Q 018529           12 KAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLEV   88 (354)
Q Consensus        12 ~a~~~~~~~~~--l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~~~~~~~   88 (354)
                      ||+++...+.+  ++++++|.|.++++||+||+.++++|++|+....|..+. ...|.++|||++|+|+.  +++..|++
T Consensus         1 ~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~~   78 (323)
T TIGR02823         1 KALVVEKEDGKVSAQVETLDLSDLPEGDVLIKVAYSSLNYKDALAITGKGGVVRSYPMIPGIDAAGTVVS--SEDPRFRE   78 (323)
T ss_pred             CeEEEccCCCCcceeEeecCCCCCCCCeEEEEEEEEEcCHHHHHHHcCCCCCCCCCCccceeeeEEEEEe--cCCCCCCC
Confidence            57778777664  789999999999999999999999999999888775432 34588899999999988  55678999


Q ss_pred             CCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhh--cC
Q 018529           89 GDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNV--AK  166 (354)
Q Consensus        89 Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~--~~  166 (354)
                      ||+|++.....                 +....|+|++|+.++++.++++|+++++++++.+++.+.+||+++...  .+
T Consensus        79 Gd~V~~~~~~~-----------------~~~~~g~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~~~  141 (323)
T TIGR02823        79 GDEVIVTGYGL-----------------GVSHDGGYSQYARVPADWLVPLPEGLSLREAMALGTAGFTAALSVMALERNG  141 (323)
T ss_pred             CCEEEEccCCC-----------------CCCCCccceEEEEEchhheEECCCCCCHHHhhhhhhhHHHHHHHHHHhhhcC
Confidence            99998753100                 011358999999999999999999999999999999999998876433  44


Q ss_pred             CCCCC-eEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEE
Q 018529          167 PERGS-SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSV  244 (354)
Q Consensus       167 ~~~~~-~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~  244 (354)
                      +.+++ +|+|+|+ |.+|.+++++|+.+|+ +++++++++++.+.++++|++.+++..+.+    ..++.+..+++|+++
T Consensus       142 ~~~~~~~vlI~g~~g~vg~~~~~la~~~G~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~----~~~~~~~~~~~d~vl  216 (323)
T TIGR02823       142 LTPEDGPVLVTGATGGVGSLAVAILSKLGY-EVVASTGKAEEEDYLKELGASEVIDREDLS----PPGKPLEKERWAGAV  216 (323)
T ss_pred             CCCCCceEEEEcCCcHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHhcCCcEEEccccHH----HHHHHhcCCCceEEE
Confidence            88998 9999997 9999999999999999 778777888888999999998888765432    244555555799999


Q ss_pred             EcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhh-ccccEEEEEeccCCCCCCC----HHHHHHHHHccCCC
Q 018529          245 ECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFFGNYKPRTD----LPSVVDMYMNKQLE  319 (354)
Q Consensus       245 d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~~~~~~----~~~~~~~~~~~~~~  319 (354)
                      |++|+ +.+..++++++++ |+++.+|.... .........+ .++.++.+...... ..+.    +..+.+++..+.+.
T Consensus       217 d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  292 (323)
T TIGR02823       217 DTVGG-HTLANVLAQLKYG-GAVAACGLAGG-PDLPTTVLPFILRGVSLLGIDSVYC-PMALREAAWQRLATDLKPRNLE  292 (323)
T ss_pred             ECccH-HHHHHHHHHhCCC-CEEEEEcccCC-CCccccHHHHhhcceEEEEEecccc-CchhHHHHHHHHHHHhhcCCCc
Confidence            99998 5788999999997 99999987642 2222222333 57888888664321 1122    34455556666554


Q ss_pred             CCCceeeeeccccHHHHHHHHhcCCc-eeEEEec
Q 018529          320 LEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM  352 (354)
Q Consensus       320 ~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~~  352 (354)
                      .   +.+.|+++++++|++.+.+++. +|+|+++
T Consensus       293 ~---~~~~~~l~~~~~a~~~~~~~~~~~k~vv~~  323 (323)
T TIGR02823       293 S---ITREITLEELPEALEQILAGQHRGRTVVDV  323 (323)
T ss_pred             C---ceeeecHHHHHHHHHHHhCCCccceEEEeC
Confidence            3   2468999999999999988776 5888753

This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=100.00  E-value=4.7e-36  Score=274.23  Aligned_cols=308  Identities=23%  Similarity=0.337  Sum_probs=239.4

Q ss_pred             cceeeeccCCCc---eEEEEeecCCC-CCCeEEEEEeeeecCccchhhhccCCC---------------CCCCCcccccc
Q 018529           11 CKAAVAWEAGKP---LIIQDVEVAPP-QAMEVRIKIKYTSLCRTDLYFWESKGQ---------------TPLFPRIFGHE   71 (354)
Q Consensus        11 ~~a~~~~~~~~~---l~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~~~~~---------------~~~~p~~~G~e   71 (354)
                      |||+++++++++   +++.+.+.|.| +++||+|||.++++|++|+....+...               ....|.++|||
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~ev~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~G~e   80 (350)
T cd08248           1 MKAWQIHSYGGIDSLLLLENARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFPLTLGRD   80 (350)
T ss_pred             CceEEecccCCCcceeeecccCCCCCCCCCeEEEEEEEEecCchhHHHHcCCccchhhhhhccccccccCCCCCeeecce
Confidence            789998888875   88999999998 499999999999999999998876421               23458899999


Q ss_pred             eeEEEEEeCCCCCCCCCCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcc
Q 018529           72 AAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILS  151 (354)
Q Consensus        72 ~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~  151 (354)
                      ++|+|+.+|++++++++||+|++.+..                    ...|+|++|+.++++.++++|+++++.+++.++
T Consensus        81 ~~G~v~~vG~~v~~~~~Gd~V~~~~~~--------------------~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~  140 (350)
T cd08248          81 CSGVVVDIGSGVKSFEIGDEVWGAVPP--------------------WSQGTHAEYVVVPENEVSKKPKNLSHEEAASLP  140 (350)
T ss_pred             eEEEEEecCCCcccCCCCCEEEEecCC--------------------CCCccceeEEEecHHHeecCCCCCCHHHHhhch
Confidence            999999999999999999999875321                    135899999999999999999999999999999


Q ss_pred             cchhhhhhhhhhhcCCCC----CCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCCh
Q 018529          152 CGVSTGLGATLNVAKPER----GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDR  226 (354)
Q Consensus       152 ~~~~~a~~~l~~~~~~~~----~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~  226 (354)
                      +++.++|+++.+.+.+.+    |++|+|+|+ |++|++++++|+.+|+ .|+++.++ ++.+.++++|.+.+++..+.+ 
T Consensus       141 ~~~~ta~~~l~~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~-~v~~~~~~-~~~~~~~~~g~~~~~~~~~~~-  217 (350)
T cd08248         141 YAGLTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAWGA-HVTTTCST-DAIPLVKSLGADDVIDYNNED-  217 (350)
T ss_pred             hHHHHHHHHHHHhccCCCccCCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEeCc-chHHHHHHhCCceEEECCChh-
Confidence            999999999777777654    999999986 9999999999999999 77777654 678888999998888765533 


Q ss_pred             hHHHHHHHHcCCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCce--eec-----c-hhhhc-c-------cc
Q 018529          227 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAV--FMT-----K-PINVL-N-------ER  290 (354)
Q Consensus       227 ~~~~~i~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~--~~~-----~-~~~~~-~-------~~  290 (354)
                       +.+.+...  +++|++||++|+ .....++++++++ |+++.+|.......  ...     . ...+. .       ..
T Consensus       218 -~~~~l~~~--~~vd~vi~~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  292 (350)
T cd08248         218 -FEEELTER--GKFDVILDTVGG-DTEKWALKLLKKG-GTYVTLVSPLLKNTDKLGLVGGMLKSAVDLLKKNVKSLLKGS  292 (350)
T ss_pred             -HHHHHHhc--CCCCEEEECCCh-HHHHHHHHHhccC-CEEEEecCCcccccccccccchhhhhHHHHHHHHHHHHhcCC
Confidence             55544432  379999999998 4889999999997 99999986431111  001     0 00111 0       01


Q ss_pred             EEEEEeccCCCCCCCHHHHHHHHHccCCCCCCceeeeeccccHHHHHHHHhcCCc-eeEEE
Q 018529          291 TLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCII  350 (354)
Q Consensus       291 ~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi  350 (354)
                      .+....  .......+.++++++.++.+.+  .+.+.|+++++.++++.+.+++. +|+++
T Consensus       293 ~~~~~~--~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~~~vv~  349 (350)
T cd08248         293 HYRWGF--FSPSGSALDELAKLVEDGKIKP--VIDKVFPFEEVPEAYEKVESGHARGKTVI  349 (350)
T ss_pred             CeeEEE--ECCCHHHHHHHHHHHhCCCEec--ccceeecHHHHHHHHHHHhcCCCceEEEe
Confidence            010010  0112345888999999997654  36788999999999999987765 47765

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases

Probab=100.00  E-value=7.2e-35  Score=263.58  Aligned_cols=312  Identities=17%  Similarity=0.194  Sum_probs=242.6

Q ss_pred             cceeeeccCCC--ceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCC-CCCCcccccceeEEEEEeCCCCCCCC
Q 018529           11 CKAAVAWEAGK--PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLE   87 (354)
Q Consensus        11 ~~a~~~~~~~~--~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~~~~~~   87 (354)
                      |||+++.+++.  .+++++.|.|+|+++||+||+.++++|++|+....+.... ..+|.++|||++|+|++  +++++++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~   78 (324)
T cd08288           1 FKALVLEKDDGGTSAELRELDESDLPEGDVTVEVHYSTLNYKDGLAITGKGGIVRTFPLVPGIDLAGTVVE--SSSPRFK   78 (324)
T ss_pred             CeeEEEeccCCCcceEEEECCCCCCCCCeEEEEEEEEecCHHHHHHhcCCccccCCCCCccccceEEEEEe--CCCCCCC
Confidence            78999998875  3889999999999999999999999999999887765421 33578899999999998  6777899


Q ss_pred             CCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhh--hhc
Q 018529           88 VGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATL--NVA  165 (354)
Q Consensus        88 ~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~--~~~  165 (354)
                      +||+|++....                 .+....|+|++|+.++.+.++++|+++++++++.++++++++++++.  +..
T Consensus        79 ~Gd~V~~~~~~-----------------~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~~~~~~~~  141 (324)
T cd08288          79 PGDRVVLTGWG-----------------VGERHWGGYAQRARVKADWLVPLPEGLSARQAMAIGTAGFTAMLCVMALEDH  141 (324)
T ss_pred             CCCEEEECCcc-----------------CCCCCCCcceeEEEEchHHeeeCCCCCCHHHHhhhhhHHHHHHHHHHHHhhc
Confidence            99999875210                 00012589999999999999999999999999999999999987643  123


Q ss_pred             CCC-CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEE
Q 018529          166 KPE-RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRS  243 (354)
Q Consensus       166 ~~~-~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv  243 (354)
                      +.. ++++|+|+|+ |++|.+++|+|+.+|+ +|+++++++++.++++++|++.++++.+.    ...++.++.+++|.+
T Consensus       142 ~~~~~~~~vlI~ga~g~vg~~~~~~A~~~G~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~~----~~~~~~~~~~~~~~~  216 (324)
T cd08288         142 GVTPGDGPVLVTGAAGGVGSVAVALLARLGY-EVVASTGRPEEADYLRSLGASEIIDRAEL----SEPGRPLQKERWAGA  216 (324)
T ss_pred             CcCCCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHhcCCCEEEEcchh----hHhhhhhccCcccEE
Confidence            445 6789999997 9999999999999999 78888899999999999999988887653    224555655578999


Q ss_pred             EEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhh-ccccEEEEEeccCCCC---CCCHHHHHHHHHccCCC
Q 018529          244 VECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFFGNYKP---RTDLPSVVDMYMNKQLE  319 (354)
Q Consensus       244 ~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~~~---~~~~~~~~~~~~~~~~~  319 (354)
                      +|++++ ..+..++..++.+ |+++.+|.... .........+ .++.++.+........   .+.+..+++++..+.+.
T Consensus       217 ~d~~~~-~~~~~~~~~~~~~-g~~~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (324)
T cd08288         217 VDTVGG-HTLANVLAQTRYG-GAVAACGLAGG-ADLPTTVMPFILRGVTLLGIDSVMAPIERRRAAWARLARDLDPALLE  293 (324)
T ss_pred             EECCcH-HHHHHHHHHhcCC-CEEEEEEecCC-CCCCcchhhhhccccEEEEEEeecccchhhHHHHHHHHHHHhcCCcc
Confidence            999987 5677888899987 99999987532 1112223333 5788888875432211   12345566677777554


Q ss_pred             CCCceeeeeccccHHHHHHHHhcCCc-eeEEEec
Q 018529          320 LEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM  352 (354)
Q Consensus       320 ~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~~  352 (354)
                      +   +.+.++++++.+|++.+.+++. +|+++++
T Consensus       294 ~---i~~~~~~~~~~~a~~~~~~~~~~~~vvv~~  324 (324)
T cd08288         294 A---LTREIPLADVPDAAEAILAGQVRGRVVVDV  324 (324)
T ss_pred             c---cceeecHHHHHHHHHHHhcCCccCeEEEeC
Confidence            3   3688999999999999988776 5888764

Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=100.00  E-value=1.3e-34  Score=260.74  Aligned_cols=308  Identities=25%  Similarity=0.322  Sum_probs=249.2

Q ss_pred             ceeeeccCCCc--eEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 018529           12 KAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG   89 (354)
Q Consensus        12 ~a~~~~~~~~~--l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~G   89 (354)
                      ||+....++.+  +.+.+.+.|.+.++||+|+|.++++|+.|+....+..+. .+|.++|||++|+|+.+|++++++++|
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~~~~~~-~~~~~~g~e~~G~v~~~g~~~~~~~~G   79 (320)
T cd05286           1 KAVRIHKTGGPEVLEYEDVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYPL-PLPFVLGVEGAGVVEAVGPGVTGFKVG   79 (320)
T ss_pred             CeEEEecCCCccceEEeecCCCCCCCCEEEEEEEEeecCHHHHHHhcCCCCC-CCCccCCcceeEEEEEECCCCCCCCCC
Confidence            46666655543  666777777788999999999999999999887765433 457789999999999999999999999


Q ss_pred             CEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhcCCCC
Q 018529           90 DHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPER  169 (354)
Q Consensus        90 d~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~  169 (354)
                      |+|++..                       ..|+|++|+.++.+.++++|+++++.+++.+++.+.++|+++.+..++++
T Consensus        80 ~~V~~~~-----------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~  136 (320)
T cd05286          80 DRVAYAG-----------------------PPGAYAEYRVVPASRLVKLPDGISDETAAALLLQGLTAHYLLRETYPVKP  136 (320)
T ss_pred             CEEEEec-----------------------CCCceeEEEEecHHHceeCCCCCCHHHHhhccchHHHHHHHHHHhcCCCC
Confidence            9998651                       15799999999999999999999999999999999999999877889999


Q ss_pred             CCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC-CccEEEEcc
Q 018529          170 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECT  247 (354)
Q Consensus       170 ~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~~dvv~d~~  247 (354)
                      |++|+|+|+ |++|++++++|+.+|+ .|+++++++++.++++++|++.+++..+.+  +.+.+...+.+ ++|++|+|+
T Consensus       137 g~~vlI~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~d~vl~~~  213 (320)
T cd05286         137 GDTVLVHAAAGGVGLLLTQWAKALGA-TVIGTVSSEEKAELARAAGADHVINYRDED--FVERVREITGGRGVDVVYDGV  213 (320)
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHCCCCEEEeCCchh--HHHHHHHHcCCCCeeEEEECC
Confidence            999999996 9999999999999999 889998999999999999998888766543  77778887766 899999999


Q ss_pred             cChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhh-ccccEEEEEeccCCCCC-----CCHHHHHHHHHccCCCCC
Q 018529          248 GNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFFGNYKPR-----TDLPSVVDMYMNKQLELE  321 (354)
Q Consensus       248 g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~~~~-----~~~~~~~~~~~~~~~~~~  321 (354)
                      ++ .....++++++++ |+++.+|..... ...+....+ .+++++.+.........     +.+.++++++.++.+.+.
T Consensus       214 ~~-~~~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  290 (320)
T cd05286         214 GK-DTFEGSLDSLRPR-GTLVSFGNASGP-VPPFDLLRLSKGSLFLTRPSLFHYIATREELLARAAELFDAVASGKLKVE  290 (320)
T ss_pred             Cc-HhHHHHHHhhccC-cEEEEEecCCCC-CCccCHHHHHhcCcEEEEEehhhhcCCHHHHHHHHHHHHHHHHCCCCcCc
Confidence            98 6888999999997 999999865422 222233333 46777765543222211     124567788888876654


Q ss_pred             CceeeeeccccHHHHHHHHhcCCc-eeEEEe
Q 018529          322 KFITHRIPFSEINKAFEYMVKGEG-LRCIIS  351 (354)
Q Consensus       322 ~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~  351 (354)
                        ..+.|++++++++++.+.+++. +|++++
T Consensus       291 --~~~~~~~~~~~~a~~~~~~~~~~~~vv~~  319 (320)
T cd05286         291 --IGKRYPLADAAQAHRDLESRKTTGKLLLI  319 (320)
T ss_pred             --ccceEcHHHHHHHHHHHHcCCCCceEEEe
Confidence              5678999999999999987765 577765

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=100.00  E-value=1.1e-34  Score=261.86  Aligned_cols=314  Identities=27%  Similarity=0.353  Sum_probs=251.3

Q ss_pred             cceeeeccCCCc--eEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCC-CCCCCcccccceeEEEEEeCCCCCCCC
Q 018529           11 CKAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ-TPLFPRIFGHEAAGVVESVGEGVSDLE   87 (354)
Q Consensus        11 ~~a~~~~~~~~~--l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~-~~~~p~~~G~e~~G~V~~vG~~~~~~~   87 (354)
                      ||++++..++.+  +++.+.+.|.+.+++|+|++.++++|++|+....+... ....|.++|||++|+|+++|+++++|+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~   80 (325)
T cd08253           1 MRAIRYHEFGAPDVLRLGDLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPGLPPLPYVPGSDGAGVVEAVGEGVDGLK   80 (325)
T ss_pred             CceEEEcccCCcccceeeecCCCCCCCCEEEEEEEEEecChhHhhhccCCCCCCCCCCeecccceEEEEEeeCCCCCCCC
Confidence            678888876543  77888998889999999999999999999988766443 245688999999999999999999999


Q ss_pred             CCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhcCC
Q 018529           88 VGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKP  167 (354)
Q Consensus        88 ~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~~~  167 (354)
                      +||+|++.....                  ....|++++|+.++++.++++|+++++.+++.+++++.+||+++....++
T Consensus        81 ~Gd~v~~~~~~~------------------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~~a~~~l~~~~~~  142 (325)
T cd08253          81 VGDRVWLTNLGW------------------GRRQGTAAEYVVVPADQLVPLPDGVSFEQGAALGIPALTAYRALFHRAGA  142 (325)
T ss_pred             CCCEEEEecccc------------------CCCCcceeeEEEecHHHcEeCCCCCCHHHHhhhhhHHHHHHHHHHHHhCC
Confidence            999998763100                  01257999999999999999999999999999999999999998777899


Q ss_pred             CCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC-CccEEEE
Q 018529          168 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVE  245 (354)
Q Consensus       168 ~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~~dvv~d  245 (354)
                      ++|++++|+|+ |++|.+++++++..|. .|+++++++++.+.++++|++.+++....+  +.+.+.+...+ ++|++++
T Consensus       143 ~~g~~vlI~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~d~vi~  219 (325)
T cd08253         143 KAGETVLVHGGSGAVGHAAVQLARWAGA-RVIATASSAEGAELVRQAGADAVFNYRAED--LADRILAATAGQGVDVIIE  219 (325)
T ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEeCCCcC--HHHHHHHHcCCCceEEEEE
Confidence            99999999986 9999999999999999 899999999999999999998888776554  77777777665 8999999


Q ss_pred             cccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhh-hccccEEEEEeccCCCC---CCCHHHHHHHHHccCCCCC
Q 018529          246 CTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNYKP---RTDLPSVVDMYMNKQLELE  321 (354)
Q Consensus       246 ~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~~---~~~~~~~~~~~~~~~~~~~  321 (354)
                      ++|+ ......+++++.+ |+++.++.....  ....... +.++.++.+........   .+.++.+.+++..+.+.+.
T Consensus       220 ~~~~-~~~~~~~~~l~~~-g~~v~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  295 (325)
T cd08253         220 VLAN-VNLAKDLDVLAPG-GRIVVYGSGGLR--GTIPINPLMAKEASIRGVLLYTATPEERAAAAEAIAAGLADGALRPV  295 (325)
T ss_pred             CCch-HHHHHHHHhhCCC-CEEEEEeecCCc--CCCChhHHHhcCceEEeeehhhcCHHHHHHHHHHHHHHHHCCCccCc
Confidence            9988 5678889999997 999999865411  1222222 34666776655322111   1124455667777765443


Q ss_pred             CceeeeeccccHHHHHHHHhcCCc-eeEEEe
Q 018529          322 KFITHRIPFSEINKAFEYMVKGEG-LRCIIS  351 (354)
Q Consensus       322 ~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~  351 (354)
                        ..+.|+++++.++++.+.+++. +|++++
T Consensus       296 --~~~~~~~~~~~~~~~~~~~~~~~~kvv~~  324 (325)
T cd08253         296 --IAREYPLEEAAAAHEAVESGGAIGKVVLD  324 (325)
T ss_pred             --cccEEcHHHHHHHHHHHHcCCCcceEEEe
Confidence              5688999999999999987665 588775

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=100.00  E-value=1.4e-34  Score=260.92  Aligned_cols=308  Identities=26%  Similarity=0.344  Sum_probs=250.3

Q ss_pred             cceeeeccCCCc--eEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCC-CCCCcccccceeEEEEEeCCCCCCCC
Q 018529           11 CKAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLE   87 (354)
Q Consensus        11 ~~a~~~~~~~~~--l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~~~~~~   87 (354)
                      |||+++.+.+.+  +++.+.+.|.+.+++|+||+.++++|+.|+....+..+. ...|.++|||++|+|+++|+++++++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~   80 (323)
T cd05276           1 MKAIVIKEPGGPEVLELGEVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLYPPPPGASDILGLEVAGVVVAVGPGVTGWK   80 (323)
T ss_pred             CeEEEEecCCCcccceEEecCCCCCCCCEEEEEEEEeecCHHHHHHhCCCCCCCCCCCCcccceeEEEEEeeCCCCCCCC
Confidence            789999886554  777788888789999999999999999999887664432 34578999999999999999999999


Q ss_pred             CCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhcCC
Q 018529           88 VGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKP  167 (354)
Q Consensus        88 ~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~~~  167 (354)
                      +||+|++..                       ..|+|++|+.++++.++++|+++++.+++.++.++.++|+++.+...+
T Consensus        81 ~Gd~V~~~~-----------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~a~~~~~~~~~~  137 (323)
T cd05276          81 VGDRVCALL-----------------------AGGGYAEYVVVPAGQLLPVPEGLSLVEAAALPEVFFTAWQNLFQLGGL  137 (323)
T ss_pred             CCCEEEEec-----------------------CCCceeEEEEcCHHHhccCCCCCCHHHHhhchhHHHHHHHHHHHhcCC
Confidence            999998651                       237999999999999999999999999999999999999998777889


Q ss_pred             CCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC-CccEEEE
Q 018529          168 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVE  245 (354)
Q Consensus       168 ~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~~dvv~d  245 (354)
                      .++++|+|+|+ |++|++++++++..|+ .|+++++++++.+.++++|++.+++....+  +.+.+.+.+.+ ++|++|+
T Consensus       138 ~~~~~vlv~g~~~~ig~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~d~vi~  214 (323)
T cd05276         138 KAGETVLIHGGASGVGTAAIQLAKALGA-RVIATAGSEEKLEACRALGADVAINYRTED--FAEEVKEATGGRGVDVILD  214 (323)
T ss_pred             CCCCEEEEEcCcChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEeCCchh--HHHHHHHHhCCCCeEEEEE
Confidence            99999999997 9999999999999999 789998999999999999988887766543  66777777766 8999999


Q ss_pred             cccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhh-ccccEEEEEeccCCCCC-------CCHHHHHHHHHccC
Q 018529          246 CTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFFGNYKPR-------TDLPSVVDMYMNKQ  317 (354)
Q Consensus       246 ~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~~~~-------~~~~~~~~~~~~~~  317 (354)
                      ++|+ .....++++++++ |+++.++...... .......+ .+++++.++........       ..+.++++++.+++
T Consensus       215 ~~g~-~~~~~~~~~~~~~-g~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (323)
T cd05276         215 MVGG-DYLARNLRALAPD-GRLVLIGLLGGAK-AELDLAPLLRKRLTLTGSTLRSRSLEEKAALAAAFREHVWPLFASGR  291 (323)
T ss_pred             CCch-HHHHHHHHhhccC-CEEEEEecCCCCC-CCCchHHHHHhCCeEEEeeccchhhhccHHHHHHHHHHHHHHHHCCC
Confidence            9998 5578899999997 9999998653221 22222323 47888888775432111       12456778888886


Q ss_pred             CCCCCceeeeeccccHHHHHHHHhcCCc-eeEE
Q 018529          318 LELEKFITHRIPFSEINKAFEYMVKGEG-LRCI  349 (354)
Q Consensus       318 ~~~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~v  349 (354)
                      +.+  ..++.|++++++++++.+.+++. +|++
T Consensus       292 ~~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv  322 (323)
T cd05276         292 IRP--VIDKVFPLEEAAEAHRRMESNEHIGKIV  322 (323)
T ss_pred             ccC--CcceEEcHHHHHHHHHHHHhCCCcceEe
Confidence            654  36788999999999999987665 4655

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=4.3e-35  Score=258.00  Aligned_cols=268  Identities=31%  Similarity=0.481  Sum_probs=221.4

Q ss_pred             eEEEEEeeeecCccchhhhccCCC-CCCCCcccccceeEEEEEeCCCCCCCCCCCEEEecccCCCCCCcccccCCCCCCc
Q 018529           37 EVRIKIKYTSLCRTDLYFWESKGQ-TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPV  115 (354)
Q Consensus        37 evlV~v~~~~i~~~D~~~~~~~~~-~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~  115 (354)
                      ||+|+|.++++|+.|+....+..+ ...+|.++|||++|+|+++|++++.|++||+|++.+..+|++|.+|.........
T Consensus         1 ~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~   80 (271)
T cd05188           1 EVLVRVEAAGLCGTDLHIRRGGYPPPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRELCPGGGI   80 (271)
T ss_pred             CeEEEEEEEEecchhHHHHcCCCCcCCCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHhhCCCCCE
Confidence            689999999999999998877654 3455789999999999999999999999999999999999999999872223333


Q ss_pred             ccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCc
Q 018529          116 NHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGAS  195 (354)
Q Consensus       116 ~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~  195 (354)
                      .+....|+|++|+.++.+.++++|+++++++++.+++++.+||+++.....++++++|||+|+|++|++++++++..|. 
T Consensus        81 ~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~G~~~~~~a~~~g~-  159 (271)
T cd05188          81 LGEGLDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGGVGLLAAQLAKAAGA-  159 (271)
T ss_pred             eccccCCcceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCC-
Confidence            3444568999999999999999999999999999999999999998777777999999999986699999999999998 


Q ss_pred             EEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC-CccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCC
Q 018529          196 RIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS  274 (354)
Q Consensus       196 ~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~  274 (354)
                      +|+++++++++.+.++++|.+.+++..+.+  +.+.+. ...+ ++|++++++++......++++++++ |+++.++...
T Consensus       160 ~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~-~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~-G~~v~~~~~~  235 (271)
T cd05188         160 RVIVTDRSDEKLELAKELGADHVIDYKEED--LEEELR-LTGGGGADVVIDAVGGPETLAQALRLLRPG-GRIVVVGGTS  235 (271)
T ss_pred             eEEEEcCCHHHHHHHHHhCCceeccCCcCC--HHHHHH-HhcCCCCCEEEECCCCHHHHHHHHHhcccC-CEEEEEccCC
Confidence            899999999999999999988888776654  555555 4444 8999999999867888999999997 9999998765


Q ss_pred             CCceeecchhhhccccEEEEEeccCCCCCCCHHHHHHH
Q 018529          275 KDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDM  312 (354)
Q Consensus       275 ~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~  312 (354)
                      ...........+.+++++.++....+   .++++++++
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~  270 (271)
T cd05188         236 GGPPLDDLRRLLFKELTIIGSTGGTR---EDFEEALDL  270 (271)
T ss_pred             CCCCcccHHHHHhcceEEEEeecCCH---HHHHHHHhh
Confidence            33322222333558999999876433   356666654

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast

Probab=100.00  E-value=1.6e-34  Score=264.13  Aligned_cols=318  Identities=19%  Similarity=0.268  Sum_probs=237.2

Q ss_pred             cceeeeccCCCceEEEEeecCCC---CCCeEEEEEeeeecCccchhhhccCCCCCC-CCcccccceeEEEEEeCCCCC-C
Q 018529           11 CKAAVAWEAGKPLIIQDVEVAPP---QAMEVRIKIKYTSLCRTDLYFWESKGQTPL-FPRIFGHEAAGVVESVGEGVS-D   85 (354)
Q Consensus        11 ~~a~~~~~~~~~l~~~~~~~p~~---~~~evlV~v~~~~i~~~D~~~~~~~~~~~~-~p~~~G~e~~G~V~~vG~~~~-~   85 (354)
                      .|++++.+++.++++++++.|.|   ++++|+||+.++++|++|+....+...... .|.++|+|++|+|+++|++++ .
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~I~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~   80 (352)
T cd08247           1 YKALTFKNNTSPLTITTIKLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYTFHFKVKEKGLGRDYSGVIVKVGSNVASE   80 (352)
T ss_pred             CceEEEecCCCcceeeccCCCCCCCCCCCeEEEEEEEEecChHhHHHhcccccccccCCCccCceeEEEEEEeCcccccC
Confidence            36889999988888888887776   899999999999999999987654222222 377899999999999999998 8


Q ss_pred             CCCCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeecc----ceEECCCCCCccchhhcccchhhhhhhh
Q 018529           86 LEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSG----CVAKINPLAPLDKVCILSCGVSTGLGAT  161 (354)
Q Consensus        86 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~----~~~~~P~~~~~~~aa~l~~~~~~a~~~l  161 (354)
                      |++||+|++.....|                  ...|+|++|++++..    .++++|+++++.+++.+++++.+||+++
T Consensus        81 ~~~Gd~V~~~~~~~~------------------~~~g~~~~~~~v~~~~~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l  142 (352)
T cd08247          81 WKVGDEVCGIYPHPY------------------GGQGTLSQYLLVDPKKDKKSITRKPENISLEEAAAWPLVLGTAYQIL  142 (352)
T ss_pred             CCCCCEEEEeecCCC------------------CCCceeeEEEEEccccccceeEECCCCCCHHHHHHhHHHHHHHHHHH
Confidence            999999987632211                  135899999999988    7999999999999999999999999997


Q ss_pred             hhhc-CCCCCCeEEEEcC-ChhHHHHHHHHHHcCC-cEEEEEcCChhhHHHHHhcCCceEEcCCCCCh--hHHHHHHHHc
Q 018529          162 LNVA-KPERGSSVAVFGL-GAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDR--PIQEVIAEMT  236 (354)
Q Consensus       162 ~~~~-~~~~~~~vlI~G~-g~~G~~a~~~a~~~g~-~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~--~~~~~i~~~~  236 (354)
                      .+.. .+++|++|+|+|+ |.+|.+++++|+.+|. +.++++.+ +++.++++++|++.+++..+.++  .+.+.++..+
T Consensus       143 ~~~~~~~~~g~~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~~~-~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~  221 (352)
T cd08247         143 EDLGQKLGPDSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTCS-SRSAELNKKLGADHFIDYDAHSGVKLLKPVLENVK  221 (352)
T ss_pred             HHhhhccCCCCeEEEECCCchHHHHHHHHHHhcCCcceEEEEeC-hhHHHHHHHhCCCEEEecCCCcccchHHHHHHhhc
Confidence            6666 7999999999987 8999999999999854 36677754 55566888899988888765431  1333344444


Q ss_pred             -CCCccEEEEcccChHhHHHHHHHhh---CCCceEEEEcCCCCCc-ee---------ecchhhhc-----cccEEEEEec
Q 018529          237 -NGGVDRSVECTGNIDNMISAFECVH---DGWGVAVLVGVPSKDA-VF---------MTKPINVL-----NERTLKGTFF  297 (354)
Q Consensus       237 -~~~~dvv~d~~g~~~~~~~~~~~l~---~~~g~~v~~g~~~~~~-~~---------~~~~~~~~-----~~~~i~g~~~  297 (354)
                       ++++|++|||+|+......++++++   ++ |+++.++...... ..         ......+.     ....+.....
T Consensus       222 ~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  300 (352)
T cd08247         222 GQGKFDLILDCVGGYDLFPHINSILKPKSKN-GHYVTIVGDYKANYKKDTFNSWDNPSANARKLFGSLGLWSYNYQFFLL  300 (352)
T ss_pred             CCCCceEEEECCCCHHHHHHHHHHhCccCCC-CEEEEEeCCCcccccchhhhhccccchhhhhhhhhhcCCCcceEEEEe
Confidence             3489999999998667888999999   97 9999764221110 00         00011111     2222222111


Q ss_pred             cCCCCCCCHHHHHHHHHccCCCCCCceeeeeccccHHHHHHHHhcCCc-eeEEEec
Q 018529          298 GNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM  352 (354)
Q Consensus       298 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~~  352 (354)
                       .. ..+.+..+++++.++.+.+  ...+.++++++++||+.+.+++. +|+++++
T Consensus       301 -~~-~~~~~~~~~~~~~~~~l~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  352 (352)
T cd08247         301 -DP-NADWIEKCAELIADGKVKP--PIDSVYPFEDYKEAFERLKSNRAKGKVVIKV  352 (352)
T ss_pred             -cC-CHHHHHHHHHHHhCCCeEe--eeccEecHHHHHHHHHHHHcCCCCCcEEEeC
Confidence             11 1134677889998986653  36788999999999999988775 6888763

This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=100.00  E-value=7.7e-35  Score=263.94  Aligned_cols=305  Identities=19%  Similarity=0.245  Sum_probs=240.8

Q ss_pred             cceeeeccCCC------ceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCC---CCCCcccccceeEEEEEeCC
Q 018529           11 CKAAVAWEAGK------PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT---PLFPRIFGHEAAGVVESVGE   81 (354)
Q Consensus        11 ~~a~~~~~~~~------~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~---~~~p~~~G~e~~G~V~~vG~   81 (354)
                      .||+.+.+.++      .+++.+.+.|++.+++|+||+.++++|+.|.....+....   ...+.++|+|++|+|+++|+
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~Vkv~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~   81 (329)
T cd05288           2 NRQVVLAKRPEGPPPPDDFELVEVPLPELKDGEVLVRTLYLSVDPYMRGWMSDAKSYSPPVQLGEPMRGGGVGEVVESRS   81 (329)
T ss_pred             CcEEEEeccCCCCCCccceeEEeccCCCCCCCeEEEEEEEEecCHHHhhhhccCcccCCCccCCCcccCceEEEEEecCC
Confidence            46777765442      2889999999999999999999999999886655443211   11245789999999999996


Q ss_pred             CCCCCCCCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeec-cceEECCCCCC--ccchhh-cccchhhh
Q 018529           82 GVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHS-GCVAKINPLAP--LDKVCI-LSCGVSTG  157 (354)
Q Consensus        82 ~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~-~~~~~~P~~~~--~~~aa~-l~~~~~~a  157 (354)
                      +  ++++||+|+..                          ++|++|+.+++ +.++++|++++  +.+++. +++++.+|
T Consensus        82 ~--~~~~Gd~V~~~--------------------------~~~~~~~~v~~~~~~~~lP~~~~~~~~~~~~~l~~~~~ta  133 (329)
T cd05288          82 P--DFKVGDLVSGF--------------------------LGWQEYAVVDGASGLRKLDPSLGLPLSAYLGVLGMTGLTA  133 (329)
T ss_pred             C--CCCCCCEEecc--------------------------cceEEEEEecchhhcEECCcccCCCHHHHHHhcccHHHHH
Confidence            4  79999999854                          48999999999 99999999985  555555 88899999


Q ss_pred             hhhhhhhcCCCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh-cCCceEEcCCCCChhHHHHHHHH
Q 018529          158 LGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEM  235 (354)
Q Consensus       158 ~~~l~~~~~~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~-lg~~~v~~~~~~~~~~~~~i~~~  235 (354)
                      |+++.....+.++++|||+|+ |++|++++++|+..|+ +|+++++++++.+.+++ +|++.++++.+.+  +.+.+.+.
T Consensus       134 ~~~l~~~~~~~~~~~vlI~g~~g~ig~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~v~~~  210 (329)
T cd05288         134 YFGLTEIGKPKPGETVVVSAAAGAVGSVVGQIAKLLGA-RVVGIAGSDEKCRWLVEELGFDAAINYKTPD--LAEALKEA  210 (329)
T ss_pred             HHHHHhccCCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhhcCCceEEecCChh--HHHHHHHh
Confidence            999877788999999999985 9999999999999999 89999999999999988 9998888877654  77777777


Q ss_pred             cCCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceee----c-chhhhccccEEEEEeccCCCC--CCCHHH
Q 018529          236 TNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFM----T-KPINVLNERTLKGTFFGNYKP--RTDLPS  308 (354)
Q Consensus       236 ~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~----~-~~~~~~~~~~i~g~~~~~~~~--~~~~~~  308 (354)
                      +++++|++||++|+ ..+..++++++++ |+++.+|.........    . ....+.++.++.++.......  .+.+.+
T Consensus       211 ~~~~~d~vi~~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (329)
T cd05288         211 APDGIDVYFDNVGG-EILDAALTLLNKG-GRIALCGAISQYNATEPPGPKNLGNIITKRLTMQGFIVSDYADRFPEALAE  288 (329)
T ss_pred             ccCCceEEEEcchH-HHHHHHHHhcCCC-ceEEEEeeccCcccccccccccHHHHhhCcceEEeecchhhHHHHHHHHHH
Confidence            75689999999998 6889999999997 9999998654321111    1 222345788888766533211  134677


Q ss_pred             HHHHHHccCCCCCCceeeeeccccHHHHHHHHhcCCc-eeEEE
Q 018529          309 VVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCII  350 (354)
Q Consensus       309 ~~~~~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi  350 (354)
                      +++++.++.+.+.+  ...++++++.++++.+.+++. +|+++
T Consensus       289 ~~~~~~~g~i~~~~--~~~~~l~~~~~a~~~~~~~~~~gkvvv  329 (329)
T cd05288         289 LAKWLAEGKLKYRE--DVVEGLENAPEAFLGLFTGKNTGKLVV  329 (329)
T ss_pred             HHHHHHCCCccccc--cccccHHHHHHHHHHHhcCCCccceeC
Confidence            88999999877653  355899999999999987765 46653

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=9.5e-35  Score=262.71  Aligned_cols=312  Identities=24%  Similarity=0.331  Sum_probs=247.0

Q ss_pred             cceeeeccCC--CceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCCC
Q 018529           11 CKAAVAWEAG--KPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEV   88 (354)
Q Consensus        11 ~~a~~~~~~~--~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~   88 (354)
                      |||+++.+++  +.+++++.+.|++.+++|+||+.++++|++|+....+......+|.++|||++|+|+.+|++++++++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~~   80 (325)
T cd08271           1 MKAWVLPKPGAALQLTLEEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPAWSYPHVPGVDGAGVVVAVGAKVTGWKV   80 (325)
T ss_pred             CeeEEEccCCCcceeEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCcccccceEEEEEEeCCCCCcCCC
Confidence            7999999988  35999999999999999999999999999999887665433344778999999999999999999999


Q ss_pred             CCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhcCCC
Q 018529           89 GDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPE  168 (354)
Q Consensus        89 Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~~~~  168 (354)
                      ||+|++....                    ...|+|++|+.++++.++++|+++++.+++.+.+.+.++|+++.+.+.++
T Consensus        81 Gd~V~~~~~~--------------------~~~~~~~s~~~~~~~~~~~ip~~~~~~~~a~~~~~~~~a~~~~~~~~~~~  140 (325)
T cd08271          81 GDRVAYHASL--------------------ARGGSFAEYTVVDARAVLPLPDSLSFEEAAALPCAGLTAYQALFKKLRIE  140 (325)
T ss_pred             CCEEEeccCC--------------------CCCccceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHHHHHHHHHhcCCC
Confidence            9999876211                    12479999999999999999999999999999999999999987888999


Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC-CccEEEEc
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVEC  246 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~~dvv~d~  246 (354)
                      +|++++|+|+ |.+|++++++|+..|+ .|+++. ++++.+.++++|++.+++....+  +.+.+++..++ ++|+++++
T Consensus       141 ~g~~vlI~g~~~~ig~~~~~~a~~~g~-~v~~~~-~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~d~vi~~  216 (325)
T cd08271         141 AGRTILITGGAGGVGSFAVQLAKRAGL-RVITTC-SKRNFEYVKSLGADHVIDYNDED--VCERIKEITGGRGVDAVLDT  216 (325)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEE-cHHHHHHHHHcCCcEEecCCCcc--HHHHHHHHcCCCCCcEEEEC
Confidence            9999999998 8999999999999999 677775 67788888889998888766554  66778877766 89999999


Q ss_pred             ccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchh---hhccccEEEEEeccCC-----CCCCCHHHHHHHHHccCC
Q 018529          247 TGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI---NVLNERTLKGTFFGNY-----KPRTDLPSVVDMYMNKQL  318 (354)
Q Consensus       247 ~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~---~~~~~~~i~g~~~~~~-----~~~~~~~~~~~~~~~~~~  318 (354)
                      +++ .....++++++++ |+++.++......  .....   ...+++.+.+......     ..++.+.++++++.++.+
T Consensus       217 ~~~-~~~~~~~~~l~~~-G~~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  292 (325)
T cd08271         217 VGG-ETAAALAPTLAFN-GHLVCIQGRPDAS--PDPPFTRALSVHEVALGAAHDHGDPAAWQDLRYAGEELLELLAAGKL  292 (325)
T ss_pred             CCc-HhHHHHHHhhccC-CEEEEEcCCCCCc--chhHHhhcceEEEEEecccccccchhhHHHHHHHHHHHHHHHHCCCe
Confidence            998 4567789999997 9999887543221  11111   1113333333321111     111235678888888876


Q ss_pred             CCCCceeeeeccccHHHHHHHHhcCCc-eeEEEec
Q 018529          319 ELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM  352 (354)
Q Consensus       319 ~~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~~  352 (354)
                      .+.  ..+.|+++++.++++.+.+++. +|+++++
T Consensus       293 ~~~--~~~~~~~~~~~~a~~~~~~~~~~~kiv~~~  325 (325)
T cd08271         293 EPL--VIEVLPFEQLPEALRALKDRHTRGKIVVTI  325 (325)
T ss_pred             eec--cceEEcHHHHHHHHHHHHcCCccceEEEEC
Confidence            543  4588999999999999987765 5888763

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=1.5e-34  Score=262.24  Aligned_cols=305  Identities=22%  Similarity=0.308  Sum_probs=238.7

Q ss_pred             ceeeeccCCCc--eEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCC-CCCCcccccceeEEEEEeCCCCCCCCC
Q 018529           12 KAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLEV   88 (354)
Q Consensus        12 ~a~~~~~~~~~--l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~~~~~~~   88 (354)
                      ||+.+...+.+  +++.+.+.|.|.++||+|++.++++|++|+.+..+..+. ..+|.++|||++|+|+.+|++++.|++
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~~   81 (331)
T cd08273           2 REVVVTRRGGPEVLKVVEADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPDQPPLPFTPGYDLVGRVDALGSGVTGFEV   81 (331)
T ss_pred             eeEEEccCCCcccEEEeccCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceEEEEEEeCCCCccCCC
Confidence            78888887654  888899999999999999999999999999988775533 346889999999999999999999999


Q ss_pred             CCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhcCCC
Q 018529           89 GDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPE  168 (354)
Q Consensus        89 Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~~~~  168 (354)
                      ||+|++..                       ..|+|++|+.++++.++++|+++++.+++.+++++.+||+++.+...++
T Consensus        82 Gd~V~~~~-----------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~  138 (331)
T cd08273          82 GDRVAALT-----------------------RVGGNAEYINLDAKYLVPVPEGVDAAEAVCLVLNYVTAYQMLHRAAKVL  138 (331)
T ss_pred             CCEEEEeC-----------------------CCcceeeEEEechHHeEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCC
Confidence            99998752                       1379999999999999999999999999999999999999987778899


Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcc
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  247 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~  247 (354)
                      ++++|+|+|+ |.+|++++++|+..|+ +|++++. +++.++++++|+.. ++....+  +.+.  ...++++|++++++
T Consensus       139 ~g~~vlI~g~~g~ig~~~~~~a~~~g~-~v~~~~~-~~~~~~~~~~g~~~-~~~~~~~--~~~~--~~~~~~~d~vl~~~  211 (331)
T cd08273         139 TGQRVLIHGASGGVGQALLELALLAGA-EVYGTAS-ERNHAALRELGATP-IDYRTKD--WLPA--MLTPGGVDVVFDGV  211 (331)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEeC-HHHHHHHHHcCCeE-EcCCCcc--hhhh--hccCCCceEEEECC
Confidence            9999999997 9999999999999999 7888877 88889999999753 4444333  3333  33345899999999


Q ss_pred             cChHhHHHHHHHhhCCCceEEEEcCCCCCceeecc---------------hhhhccccEEEEEeccCC----CCCCCHHH
Q 018529          248 GNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTK---------------PINVLNERTLKGTFFGNY----KPRTDLPS  308 (354)
Q Consensus       248 g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~---------------~~~~~~~~~i~g~~~~~~----~~~~~~~~  308 (354)
                      |+. ....++++++.+ |+++.+|...........               ...+.+..++.+......    ...+.+++
T Consensus       212 ~~~-~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~  289 (331)
T cd08273         212 GGE-SYEESYAALAPG-GTLVCYGGNSSLLQGRRSLAALGSLLARLAKLKLLPTGRRATFYYVWRDRAEDPKLFRQDLTE  289 (331)
T ss_pred             chH-HHHHHHHHhcCC-CEEEEEccCCCCCCccccccchhhhhhhhhhhcceeccceeEEEeechhcccCHHHHHHHHHH
Confidence            984 588999999997 999999875432211111               000112233322222100    01235778


Q ss_pred             HHHHHHccCCCCCCceeeeeccccHHHHHHHHhcCCc-eeEEE
Q 018529          309 VVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCII  350 (354)
Q Consensus       309 ~~~~~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi  350 (354)
                      +++++.++.+.+  .+.+.+++++++++++.+.+++. +|+|+
T Consensus       290 ~~~~~~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvv~  330 (331)
T cd08273         290 LLDLLAKGKIRP--KIAKRLPLSEVAEAHRLLESGKVVGKIVL  330 (331)
T ss_pred             HHHHHHCCCccC--CcceEEcHHHHHHHHHHHHcCCCcceEEe
Confidence            889999997654  36788999999999999887765 46664

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=3.4e-34  Score=259.09  Aligned_cols=311  Identities=25%  Similarity=0.331  Sum_probs=249.3

Q ss_pred             cceeeeccCCCc--eEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCC-CCCCcccccceeEEEEEeCCCCCCCC
Q 018529           11 CKAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLE   87 (354)
Q Consensus        11 ~~a~~~~~~~~~--l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~~~~~~   87 (354)
                      |||+++..++.+  +++.+.+.|.+.+++|+|++.++++|++|+....+.... ...|.++|||++|+|+.+|+++.+|+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~   80 (326)
T cd08272           1 MKALVLESFGGPEVFELREVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAAARPPLPAILGCDVAGVVEAVGEGVTRFR   80 (326)
T ss_pred             CeEEEEccCCCchheEEeecCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCCCCC
Confidence            689999888765  778888888889999999999999999999887664331 23477899999999999999999999


Q ss_pred             CCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhcCC
Q 018529           88 VGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKP  167 (354)
Q Consensus        88 ~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~~~  167 (354)
                      +||+|++....           .       ....|+|++|+.++.+.++++|+++++.+++.+++.+.+||+++.+..++
T Consensus        81 ~Gd~V~~~~~~-----------~-------~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~  142 (326)
T cd08272          81 VGDEVYGCAGG-----------L-------GGLQGSLAEYAVVDARLLALKPANLSMREAAALPLVGITAWEGLVDRAAV  142 (326)
T ss_pred             CCCEEEEccCC-----------c-------CCCCCceeEEEEecHHHcccCCCCCCHHHHHHhHHHHHHHHHHHHHhcCC
Confidence            99999875210           0       01257899999999999999999999999999999999999998788999


Q ss_pred             CCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC-CccEEEE
Q 018529          168 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVE  245 (354)
Q Consensus       168 ~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~~dvv~d  245 (354)
                      +++++++|+|+ |.+|++++++|+..|+ .|++++++ ++.++++++|.+.+++...  . +.+.+.+.+.+ ++|+++|
T Consensus       143 ~~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~-~~~~~~~~~g~~~~~~~~~--~-~~~~~~~~~~~~~~d~v~~  217 (326)
T cd08272         143 QAGQTVLIHGGAGGVGHVAVQLAKAAGA-RVYATASS-EKAAFARSLGADPIIYYRE--T-VVEYVAEHTGGRGFDVVFD  217 (326)
T ss_pred             CCCCEEEEEcCCCcHHHHHHHHHHHcCC-EEEEEech-HHHHHHHHcCCCEEEecch--h-HHHHHHHhcCCCCCcEEEE
Confidence            99999999985 9999999999999999 78888888 8899999999987776543  2 66677777776 8999999


Q ss_pred             cccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhhccccEEEEEeccC--C---C---CCCCHHHHHHHHHccC
Q 018529          246 CTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGN--Y---K---PRTDLPSVVDMYMNKQ  317 (354)
Q Consensus       246 ~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~--~---~---~~~~~~~~~~~~~~~~  317 (354)
                      ++++ ..+..++++++++ |+++.++... .  ...... ..+++++.+.....  .   .   ..+.+..+++++.++.
T Consensus       218 ~~~~-~~~~~~~~~l~~~-g~~v~~~~~~-~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  291 (326)
T cd08272         218 TVGG-ETLDASFEAVALY-GRVVSILGGA-T--HDLAPL-SFRNATYSGVFTLLPLLTGEGRAHHGEILREAARLVERGQ  291 (326)
T ss_pred             CCCh-HHHHHHHHHhccC-CEEEEEecCC-c--cchhhH-hhhcceEEEEEcccccccccchhhHHHHHHHHHHHHHCCC
Confidence            9998 6788899999997 9999987653 1  122222 24677777665332  1   0   1124667888888886


Q ss_pred             CCCCCcee-eeeccccHHHHHHHHhcCCc-eeEEEec
Q 018529          318 LELEKFIT-HRIPFSEINKAFEYMVKGEG-LRCIISM  352 (354)
Q Consensus       318 ~~~~~~v~-~~~~l~~~~~a~~~~~~~~~-~k~vi~~  352 (354)
                      +..  .++ +.|+++++.++++.+.+++. +|+++++
T Consensus       292 l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~  326 (326)
T cd08272         292 LRP--LLDPRTFPLEEAAAAHARLESGSARGKIVIDV  326 (326)
T ss_pred             ccc--ccccceecHHHHHHHHHHHHcCCcccEEEEEC
Confidence            653  234 88999999999999887664 5888764

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=100.00  E-value=4.5e-33  Score=251.51  Aligned_cols=311  Identities=24%  Similarity=0.315  Sum_probs=251.0

Q ss_pred             cceeeeccCCCc--eEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCC-CCCCcccccceeEEEEEeCCCCCCCC
Q 018529           11 CKAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLE   87 (354)
Q Consensus        11 ~~a~~~~~~~~~--l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~~~~~~   87 (354)
                      |||+.+..++.+  +++.+.+.|.+++++++|++.++++|+.|+....+..+. ..+|.++|||++|+|+.+|+++.+++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~   80 (325)
T TIGR02824         1 MKAIEITEPGGPEVLVLVEVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKYPPPPGASDILGLEVAGEVVAVGEGVSRWK   80 (325)
T ss_pred             CceEEEccCCCcccceEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCCCccceeEEEEEEeCCCCCCCC
Confidence            678888776655  666777777789999999999999999998887654332 23467899999999999999999999


Q ss_pred             CCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhcCC
Q 018529           88 VGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKP  167 (354)
Q Consensus        88 ~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~~~  167 (354)
                      +||+|++.                       ...|+|++|+.++.+.++++|+++++.+++.+++++.++|+++.+...+
T Consensus        81 ~Gd~V~~~-----------------------~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~~~~~~~~  137 (325)
T TIGR02824        81 VGDRVCAL-----------------------VAGGGYAEYVAVPAGQVLPVPEGLSLVEAAALPETFFTVWSNLFQRGGL  137 (325)
T ss_pred             CCCEEEEc-----------------------cCCCcceeEEEecHHHcEeCCCCCCHHHHHhhhHHHHHHHHHHHHhcCC
Confidence            99999865                       1237999999999999999999999999999999999999987788899


Q ss_pred             CCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC-CccEEEE
Q 018529          168 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVE  245 (354)
Q Consensus       168 ~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~~dvv~d  245 (354)
                      +++++++|+|+ |++|.+++++++..|+ +|+++.+++++.+.++++|++.+++....+  +.+.+....++ ++|++++
T Consensus       138 ~~~~~vlv~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~d~~i~  214 (325)
T TIGR02824       138 KAGETVLIHGGASGIGTTAIQLAKAFGA-RVFTTAGSDEKCAACEALGADIAINYREED--FVEVVKAETGGKGVDVILD  214 (325)
T ss_pred             CCCCEEEEEcCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEecCchh--HHHHHHHHcCCCCeEEEEE
Confidence            99999999996 9999999999999999 888898999999999889988777665543  66777777766 8999999


Q ss_pred             cccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhh-ccccEEEEEeccCCCCC-------CCHHHHHHHHHccC
Q 018529          246 CTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFFGNYKPR-------TDLPSVVDMYMNKQ  317 (354)
Q Consensus       246 ~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~~~~-------~~~~~~~~~~~~~~  317 (354)
                      ++|+ .....++++++++ |+++.++....... ......+ .+++++.+.........       ..+.++++++.++.
T Consensus       215 ~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (325)
T TIGR02824       215 IVGG-SYLNRNIKALALD-GRIVQIGFQGGRKA-ELDLGPLLAKRLTITGSTLRARPVAEKAAIAAELREHVWPLLASGR  291 (325)
T ss_pred             CCch-HHHHHHHHhhccC-cEEEEEecCCCCcC-CCChHHHHhcCCEEEEEehhhcchhhhHHHHHHHHHHHHHHHHCCc
Confidence            9987 5788899999997 99999986542211 3333333 58999998875442111       12355677888886


Q ss_pred             CCCCCceeeeeccccHHHHHHHHhcCCc-eeEEEec
Q 018529          318 LELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM  352 (354)
Q Consensus       318 ~~~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~~  352 (354)
                      +.+  ..++.++++++.++++.+.+++. +|+++++
T Consensus       292 l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  325 (325)
T TIGR02824       292 VRP--VIDKVFPLEDAAQAHALMESGDHIGKIVLTV  325 (325)
T ss_pred             ccC--ccccEEeHHHHHHHHHHHHhCCCcceEEEeC
Confidence            553  36788999999999999887765 5877753

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>cd08251 polyketide_synthase polyketide synthase

Probab=100.00  E-value=2.2e-33  Score=251.12  Aligned_cols=291  Identities=25%  Similarity=0.370  Sum_probs=233.0

Q ss_pred             cCCCCCCeEEEEEeeeecCccchhhhccCCCC-CCCCcccccceeEEEEEeCCCCCCCCCCCEEEecccCCCCCCccccc
Q 018529           30 VAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRF  108 (354)
Q Consensus        30 ~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~~~c~~c~~  108 (354)
                      .|++.+++++||+.++++|+.|+....+..+. ..+|.++|+|++|+|+++|+++++|++||+|++...           
T Consensus         2 ~p~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~-----------   70 (303)
T cd08251           2 VAPPGPGEVRIQVRAFSLNFGDLLCVRGLYPTMPPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGTG-----------   70 (303)
T ss_pred             CCCCCCCEEEEEEEEeecChHHHHHHCCCCCCCCCCCCCcCceeeEEEEEECCCCCCCCCCCEEEEecC-----------
Confidence            57788999999999999999999988775432 346889999999999999999999999999987621           


Q ss_pred             CCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhcCCCCCCeEEEEcC-ChhHHHHHH
Q 018529          109 SINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAE  187 (354)
Q Consensus       109 ~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vlI~G~-g~~G~~a~~  187 (354)
                                ...|+|++|+.++++.++++|+++++.+++.+++++.+||+++ +...+++|++++|+|+ |.+|.+++|
T Consensus        71 ----------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l-~~~~~~~g~~vli~~~~~~~g~~~~~  139 (303)
T cd08251          71 ----------ESMGGHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAF-ARAGLAKGEHILIQTATGGTGLMAVQ  139 (303)
T ss_pred             ----------CCCcceeeEEEccHHHeEECCCCCCHHHHHHhHHHHHHHHHHH-HhcCCCCCCEEEEecCCcHHHHHHHH
Confidence                      1347999999999999999999999999999999999999986 5789999999999975 999999999


Q ss_pred             HHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC-CccEEEEcccChHhHHHHHHHhhCCCce
Q 018529          188 GARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGV  266 (354)
Q Consensus       188 ~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~g~  266 (354)
                      +|+.+|+ +|+++++++++.+.++++|++.+++....+  +.+.+.+++++ ++|+++|++++ ......+++++++ |+
T Consensus       140 ~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~i~~~~~~~~~d~v~~~~~~-~~~~~~~~~l~~~-g~  214 (303)
T cd08251         140 LARLKGA-EIYATASSDDKLEYLKQLGVPHVINYVEED--FEEEIMRLTGGRGVDVVINTLSG-EAIQKGLNCLAPG-GR  214 (303)
T ss_pred             HHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEeCCCcc--HHHHHHHHcCCCCceEEEECCcH-HHHHHHHHHhccC-cE
Confidence            9999999 899999999999999999999888876654  77778888776 89999999976 6888899999997 99


Q ss_pred             EEEEcCCCCCceeecchhhhccccEEEEEeccCCC------CCCCHHHHHHHHHccCCCCCCceeeeeccccHHHHHHHH
Q 018529          267 AVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYK------PRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYM  340 (354)
Q Consensus       267 ~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~v~~~~~l~~~~~a~~~~  340 (354)
                      ++.++..............+.++..+....+....      ..+.+.++++++.++.+++.  ..+.|+++++.++++.+
T Consensus       215 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~~~~~~  292 (303)
T cd08251         215 YVEIAMTALKSAPSVDLSVLSNNQSFHSVDLRKLLLLDPEFIADYQAEMVSLVEEGELRPT--VSRIFPFDDIGEAYRYL  292 (303)
T ss_pred             EEEEeccCCCccCccChhHhhcCceEEEEehHHhhhhCHHHHHHHHHHHHHHHHCCCccCC--CceEEcHHHHHHHHHHH
Confidence            99987653221112222223334443332221110      01236678888888866543  56889999999999999


Q ss_pred             hcCCc-eeEE
Q 018529          341 VKGEG-LRCI  349 (354)
Q Consensus       341 ~~~~~-~k~v  349 (354)
                      .+++. +|++
T Consensus       293 ~~~~~~~~iv  302 (303)
T cd08251         293 SDRENIGKVV  302 (303)
T ss_pred             HhCCCcceEe
Confidence            87765 4655

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=3.9e-33  Score=252.24  Aligned_cols=315  Identities=27%  Similarity=0.382  Sum_probs=249.5

Q ss_pred             cceeeeccCCCc--eEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCC-CCCCcccccceeEEEEEeCCCCCCCC
Q 018529           11 CKAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLE   87 (354)
Q Consensus        11 ~~a~~~~~~~~~--l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~~~~~~   87 (354)
                      |||+.+.+.+.+  +++.+.+.|.+.+++++|+|.++++|+.|+....+.... ..+|.++|||++|+|+.+|+++.+|+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~   80 (328)
T cd08268           1 MRAVRFHQFGGPEVLRIEELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIEPPPLPARLGYEAAGVVEAVGAGVTGFA   80 (328)
T ss_pred             CeEEEEeccCCcceeEEeecCCCCCCCCeEEEEEEEEecChHHhheeccccCCCCCCCCCCCcceEEEEEeeCCCCCcCC
Confidence            678888876543  777788888889999999999999999999887664332 34477899999999999999999999


Q ss_pred             CCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhcCC
Q 018529           88 VGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKP  167 (354)
Q Consensus        88 ~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~~~  167 (354)
                      +||+|++.+...                  ....|++++|+.++++.++++|+++++.+++.+++++.++|+++.....+
T Consensus        81 ~Gd~V~~~~~~~------------------~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~  142 (328)
T cd08268          81 VGDRVSVIPAAD------------------LGQYGTYAEYALVPAAAVVKLPDGLSFVEAAALWMQYLTAYGALVELAGL  142 (328)
T ss_pred             CCCEEEeccccc------------------cCCCccceEEEEechHhcEeCCCCCCHHHHHHhhhHHHHHHHHHHHhcCC
Confidence            999998763211                  11347999999999999999999999999999999999999998778889


Q ss_pred             CCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC-CccEEEE
Q 018529          168 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVE  245 (354)
Q Consensus       168 ~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~~dvv~d  245 (354)
                      .++++++|+|+ |.+|++++++++..|+ .++.++++.++.+.++++|.+.+++....+  +.+.+.+...+ ++|++++
T Consensus       143 ~~~~~vli~g~~~~~g~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~d~vi~  219 (328)
T cd08268         143 RPGDSVLITAASSSVGLAAIQIANAAGA-TVIATTRTSEKRDALLALGAAHVIVTDEED--LVAEVLRITGGKGVDVVFD  219 (328)
T ss_pred             CCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEecCCcc--HHHHHHHHhCCCCceEEEE
Confidence            99999999987 9999999999999999 888888999999999889988888766544  66777777766 8999999


Q ss_pred             cccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchh-hhccccEEEEEeccCCCC-CCC----HHHHHHHHHccCCC
Q 018529          246 CTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI-NVLNERTLKGTFFGNYKP-RTD----LPSVVDMYMNKQLE  319 (354)
Q Consensus       246 ~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~-~~~~~~~i~g~~~~~~~~-~~~----~~~~~~~~~~~~~~  319 (354)
                      ++|+ .....++++++++ |+++.+|..... ....... .+.++.++.+........ ..+    ++.+.+++..+.+.
T Consensus       220 ~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (328)
T cd08268         220 PVGG-PQFAKLADALAPG-GTLVVYGALSGE-PTPFPLKAALKKSLTFRGYSLDEITLDPEARRRAIAFILDGLASGALK  296 (328)
T ss_pred             CCch-HhHHHHHHhhccC-CEEEEEEeCCCC-CCCCchHHHhhcCCEEEEEecccccCCHHHHHHHHHHHHHHHHCCCCc
Confidence            9998 6788899999997 999999865421 1122222 345788887765432111 112    33444556666555


Q ss_pred             CCCceeeeeccccHHHHHHHHhcCCc-eeEEEe
Q 018529          320 LEKFITHRIPFSEINKAFEYMVKGEG-LRCIIS  351 (354)
Q Consensus       320 ~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~  351 (354)
                      +.  ..+.|+++++.++++.+.+++. +|+|++
T Consensus       297 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~vv~~  327 (328)
T cd08268         297 PV--VDRVFPFDDIVEAHRYLESGQQIGKIVVT  327 (328)
T ss_pred             CC--cccEEcHHHHHHHHHHHHcCCCCceEEEe
Confidence            43  5678999999999999887765 588875

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

Probab=100.00  E-value=2.8e-33  Score=251.10  Aligned_cols=300  Identities=23%  Similarity=0.336  Sum_probs=239.9

Q ss_pred             cceeeeccCCCc--eEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCC---CCCCCcccccceeEEEEEeCCCCCC
Q 018529           11 CKAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ---TPLFPRIFGHEAAGVVESVGEGVSD   85 (354)
Q Consensus        11 ~~a~~~~~~~~~--l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~---~~~~p~~~G~e~~G~V~~vG~~~~~   85 (354)
                      |||+++..++..  +++.+.+.|+++++||+|++.++++|+.|+..+.+...   ....|.++|||++|+|+.+|+++++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~   80 (309)
T cd05289           1 MKAVRIHEYGGPEVLELADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAGVVVAVGPGVTG   80 (309)
T ss_pred             CceEEEcccCCccceeecccCCCCCCCCeEEEEEEEeeCCHHHHHHhcCCccccCCCCCCCccccceeEEEEeeCCCCCC
Confidence            688888877664  56677788888999999999999999999988766432   2345788999999999999999999


Q ss_pred             CCCCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhc
Q 018529           86 LEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVA  165 (354)
Q Consensus        86 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~  165 (354)
                      +++||+|++.+..                    ...|+|++|+.++.+.++++|+++++..++.+++.+.++|+++....
T Consensus        81 ~~~G~~V~~~~~~--------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~  140 (309)
T cd05289          81 FKVGDEVFGMTPF--------------------TRGGAYAEYVVVPADELALKPANLSFEEAAALPLAGLTAWQALFELG  140 (309)
T ss_pred             CCCCCEEEEccCC--------------------CCCCcceeEEEecHHHhccCCCCCCHHHHHhhhHHHHHHHHHHHhhc
Confidence            9999999876311                    12479999999999999999999999999999999999999977777


Q ss_pred             CCCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC-CccEE
Q 018529          166 KPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRS  243 (354)
Q Consensus       166 ~~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~~dvv  243 (354)
                      .+.++++|+|+|+ |.+|++++++++..|+ .|++++.++ +.++++++|.+.+++....+  +.+    ...+ ++|++
T Consensus       141 ~~~~~~~vlv~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~-~~~~~~~~g~~~~~~~~~~~--~~~----~~~~~~~d~v  212 (309)
T cd05289         141 GLKAGQTVLIHGAAGGVGSFAVQLAKARGA-RVIATASAA-NADFLRSLGADEVIDYTKGD--FER----AAAPGGVDAV  212 (309)
T ss_pred             CCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecch-hHHHHHHcCCCEEEeCCCCc--hhh----ccCCCCceEE
Confidence            7999999999997 9999999999999999 778777777 88888889988887766544  332    2333 89999


Q ss_pred             EEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhhccccEEEEEeccCCCCCCCHHHHHHHHHccCCCCCCc
Q 018529          244 VECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKF  323 (354)
Q Consensus       244 ~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  323 (354)
                      ++++|+ .....++++++++ |+++.+|......  .   ..+.++.++........  ...+..+++++.++.+.+  .
T Consensus       213 ~~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~~~--~---~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~--~  281 (309)
T cd05289         213 LDTVGG-ETLARSLALVKPG-GRLVSIAGPPPAE--Q---AAKRRGVRAGFVFVEPD--GEQLAELAELVEAGKLRP--V  281 (309)
T ss_pred             EECCch-HHHHHHHHHHhcC-cEEEEEcCCCcch--h---hhhhccceEEEEEeccc--HHHHHHHHHHHHCCCEEE--e
Confidence            999998 4888999999997 9999998654211  1   22335555555443221  346888899998886543  3


Q ss_pred             eeeeeccccHHHHHHHHhcCCc-eeEE
Q 018529          324 ITHRIPFSEINKAFEYMVKGEG-LRCI  349 (354)
Q Consensus       324 v~~~~~l~~~~~a~~~~~~~~~-~k~v  349 (354)
                      +++.|+++++.++++.+.+++. +|++
T Consensus       282 ~~~~~~~~~~~~a~~~~~~~~~~~kvv  308 (309)
T cd05289         282 VDRVFPLEDAAEAHERLESGHARGKVV  308 (309)
T ss_pred             eccEEcHHHHHHHHHHHHhCCCCCcEe
Confidence            6788999999999999887665 4655

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=100.00  E-value=1.5e-32  Score=247.89  Aligned_cols=309  Identities=28%  Similarity=0.477  Sum_probs=249.0

Q ss_pred             cceeeeccCCCc--eEEEEeecCCCC-CCeEEEEEeeeecCccchhhhccCCCC-CCCCcccccceeEEEEEeCCCCCCC
Q 018529           11 CKAAVAWEAGKP--LIIQDVEVAPPQ-AMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDL   86 (354)
Q Consensus        11 ~~a~~~~~~~~~--l~~~~~~~p~~~-~~evlV~v~~~~i~~~D~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~~~~~   86 (354)
                      |+|+++..++.+  +++.+.+ |.+. +++++|++.++++|+.|+....+.... ...|.++|||++|+|+.+|+++..+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~   79 (323)
T cd08241           1 MKAVVCKELGGPEDLVLEEVP-PEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQVKPPLPFVPGSEVAGVVEAVGEGVTGF   79 (323)
T ss_pred             CeEEEEecCCCcceeEEecCC-CCCCCCCeEEEEEEEEecCHHHHHHHcCCCCCCCCCCCcccceeEEEEEEeCCCCCCC
Confidence            688888755443  6777777 6665 599999999999999999887765432 3346789999999999999999999


Q ss_pred             CCCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhcC
Q 018529           87 EVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK  166 (354)
Q Consensus        87 ~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~~  166 (354)
                      ++||+|++..                       ..|++++|+.++.+.++++|+++++.+++.+..++.+||+++.+...
T Consensus        80 ~~G~~V~~~~-----------------------~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~  136 (323)
T cd08241          80 KVGDRVVALT-----------------------GQGGFAEEVVVPAAAVFPLPDGLSFEEAAALPVTYGTAYHALVRRAR  136 (323)
T ss_pred             CCCCEEEEec-----------------------CCceeEEEEEcCHHHceeCCCCCCHHHHhhhhhHHHHHHHHHHHhcC
Confidence            9999999761                       15799999999999999999999999998898899999998777788


Q ss_pred             CCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC-CccEEE
Q 018529          167 PERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSV  244 (354)
Q Consensus       167 ~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~~dvv~  244 (354)
                      ++++++|+|+|+ |++|++++++|+..|+ .|+++++++++.++++++|++.+++....+  +.+.+...+++ ++|.++
T Consensus       137 ~~~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~i~~~~~~~~~d~v~  213 (323)
T cd08241         137 LQPGETVLVLGAAGGVGLAAVQLAKALGA-RVIAAASSEEKLALARALGADHVIDYRDPD--LRERVKALTGGRGVDVVY  213 (323)
T ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHcCCceeeecCCcc--HHHHHHHHcCCCCcEEEE
Confidence            999999999998 9999999999999999 799998999999999999988877766544  77778888776 899999


Q ss_pred             EcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecch-hhhccccEEEEEeccCCCCC------CCHHHHHHHHHccC
Q 018529          245 ECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP-INVLNERTLKGTFFGNYKPR------TDLPSVVDMYMNKQ  317 (354)
Q Consensus       245 d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~-~~~~~~~~i~g~~~~~~~~~------~~~~~~~~~~~~~~  317 (354)
                      +++|+ .....++++++++ |+++.++....... .+.. ..+.+++++.+.....+...      +.+.++++++.++.
T Consensus       214 ~~~g~-~~~~~~~~~~~~~-g~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (323)
T cd08241         214 DPVGG-DVFEASLRSLAWG-GRLLVIGFASGEIP-QIPANLLLLKNISVVGVYWGAYARREPELLRANLAELFDLLAEGK  290 (323)
T ss_pred             ECccH-HHHHHHHHhhccC-CEEEEEccCCCCcC-cCCHHHHhhcCcEEEEEecccccchhHHHHHHHHHHHHHHHHCCC
Confidence            99998 7888899999997 99999986532211 1112 22447888888765433211      24667888888886


Q ss_pred             CCCCCceeeeeccccHHHHHHHHhcCCc-eeEEEe
Q 018529          318 LELEKFITHRIPFSEINKAFEYMVKGEG-LRCIIS  351 (354)
Q Consensus       318 ~~~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~  351 (354)
                      +.+  ..++.|+++++.++++.+.+++. +|++++
T Consensus       291 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~vvv~  323 (323)
T cd08241         291 IRP--HVSAVFPLEQAAEALRALADRKATGKVVLT  323 (323)
T ss_pred             ccc--ccceEEcHHHHHHHHHHHHhCCCCCcEEeC
Confidence            643  36788999999999998877665 577653

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=4.7e-32  Score=246.34  Aligned_cols=310  Identities=22%  Similarity=0.335  Sum_probs=242.7

Q ss_pred             ceeeeccCCC--ceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCC-CCCCcccccceeEEEEEeCCCCCCCCC
Q 018529           12 KAAVAWEAGK--PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLEV   88 (354)
Q Consensus        12 ~a~~~~~~~~--~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~~~~~~~   88 (354)
                      ||+.+...+.  .+++.+.+.|.+++++|+||+.++++|+.|+....+.... ...|.++|||++|+|+.+|++++++++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~   80 (337)
T cd08275           1 RAVVLTGFGGLDKLKVEKEALPEPSSGEVRVRVEACGLNFADLMARQGLYDSAPKPPFVPGFECAGTVEAVGEGVKDFKV   80 (337)
T ss_pred             CeEEEcCCCCccceEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCCCCCCCCCCcceeEEEEEEECCCCcCCCC
Confidence            4555555543  2777788888889999999999999999999988765432 345778999999999999999999999


Q ss_pred             CCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhcCCC
Q 018529           89 GDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPE  168 (354)
Q Consensus        89 Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~~~~  168 (354)
                      ||+|++..                       ..|+|++|+.++.+.++++|+.+++.+++.+++++.++|+++.+...++
T Consensus        81 G~~V~~~~-----------------------~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~  137 (337)
T cd08275          81 GDRVMGLT-----------------------RFGGYAEVVNVPADQVFPLPDGMSFEEAAAFPVNYLTAYYALFELGNLR  137 (337)
T ss_pred             CCEEEEec-----------------------CCCeeeeEEEecHHHeEECCCCCCHHHHhhhhHHHHHHHHHHHHhhCCC
Confidence            99999751                       2379999999999999999999999999999999999999987888999


Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHc-CCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEc
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIA-GASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  246 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~-g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~  246 (354)
                      ++++|+|+|+ |.+|++++++|+.. +. .++.. ..+++.++++++|++.+++....+  +.+.++..+++++|+++|+
T Consensus       138 ~~~~vli~g~~g~~g~~~~~~a~~~~~~-~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~d~v~~~  213 (337)
T cd08275         138 PGQSVLVHSAAGGVGLAAGQLCKTVPNV-TVVGT-ASASKHEALKENGVTHVIDYRTQD--YVEEVKKISPEGVDIVLDA  213 (337)
T ss_pred             CCCEEEEEcCcchHHHHHHHHHHHccCc-EEEEe-CCHHHHHHHHHcCCcEEeeCCCCc--HHHHHHHHhCCCceEEEEC
Confidence            9999999997 99999999999998 33 33322 345578888889998888776654  7777877775689999999


Q ss_pred             ccChHhHHHHHHHhhCCCceEEEEcCCCCCc--eee-------------cc-hhhhccccEEEEEeccCCCCC-----CC
Q 018529          247 TGNIDNMISAFECVHDGWGVAVLVGVPSKDA--VFM-------------TK-PINVLNERTLKGTFFGNYKPR-----TD  305 (354)
Q Consensus       247 ~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~--~~~-------------~~-~~~~~~~~~i~g~~~~~~~~~-----~~  305 (354)
                      +|+ .....++++++++ |+++.+|......  ...             .. ...+.+++++.++........     ..
T Consensus       214 ~g~-~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (337)
T cd08275         214 LGG-EDTRKSYDLLKPM-GRLVVYGAANLVTGEKRSWFKLAKKWWNRPKVDPMKLISENKSVLGFNLGWLFEERELLTEV  291 (337)
T ss_pred             CcH-HHHHHHHHhhccC-cEEEEEeecCCcCcccccccccccccccccccCHHHHhhcCceEEEeechhhhhChHHHHHH
Confidence            998 5778899999997 9999998653211  111             01 122347888888765322111     12


Q ss_pred             HHHHHHHHHccCCCCCCceeeeeccccHHHHHHHHhcCCc-eeEEEec
Q 018529          306 LPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM  352 (354)
Q Consensus       306 ~~~~~~~~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~~  352 (354)
                      +.++++++.++.+.+.  ..+.|++++++++++.+.+++. +|+++++
T Consensus       292 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~  337 (337)
T cd08275         292 MDKLLKLYEEGKIKPK--IDSVFPFEEVGEAMRRLQSRKNIGKVVLTP  337 (337)
T ss_pred             HHHHHHHHHCCCCCCc--eeeEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence            5678888888865543  5688999999999999987765 5888764

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=7.3e-32  Score=243.21  Aligned_cols=294  Identities=23%  Similarity=0.312  Sum_probs=225.4

Q ss_pred             EEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCC---CCCCCcccccceeEEEEEeCCCCCCCCCCCEEEecccCCC
Q 018529           24 IIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ---TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGEC  100 (354)
Q Consensus        24 ~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~---~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~  100 (354)
                      ++.+.+.|+++++||+|++.++++|++|+....+...   ....|.++|||++|+|+++|++++++++||+|++....  
T Consensus        15 ~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~--   92 (319)
T cd08267          15 LEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSGVTRFKVGDEVFGRLPP--   92 (319)
T ss_pred             ccccCCCCCCCCCEEEEEEEEeeCCHHHHHHHcCCCcccccCCCCCcccceeeEEEEEeCCCCCCCCCCCEEEEeccC--
Confidence            7788899999999999999999999999988766432   12346789999999999999999999999999876221  


Q ss_pred             CCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhcCCCCCCeEEEEcC-C
Q 018529          101 GDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-G  179 (354)
Q Consensus       101 ~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vlI~G~-g  179 (354)
                                        ...|+|++|+.++.+.++++|+++++.+++.+++++.+||+++.....++++++|+|+|+ |
T Consensus        93 ------------------~~~g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vli~g~~g  154 (319)
T cd08267          93 ------------------KGGGALAEYVVAPESGLAKKPEGVSFEEAAALPVAGLTALQALRDAGKVKPGQRVLINGASG  154 (319)
T ss_pred             ------------------CCCceeeEEEEechhheEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCc
Confidence                              124789999999999999999999999999999999999999777777999999999997 9


Q ss_pred             hhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC-CccEEEEcccCh-HhHHHHH
Q 018529          180 AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNI-DNMISAF  257 (354)
Q Consensus       180 ~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~~dvv~d~~g~~-~~~~~~~  257 (354)
                      ++|++++++|+..|+ +|++++++ ++.+.++++|.+.+++....+  +.   ...+.+ ++|++++|+|+. ......+
T Consensus       155 ~~g~~~~~la~~~g~-~v~~~~~~-~~~~~~~~~g~~~~~~~~~~~--~~---~~~~~~~~~d~vi~~~~~~~~~~~~~~  227 (319)
T cd08267         155 GVGTFAVQIAKALGA-HVTGVCST-RNAELVRSLGADEVIDYTTED--FV---ALTAGGEKYDVIFDAVGNSPFSLYRAS  227 (319)
T ss_pred             HHHHHHHHHHHHcCC-EEEEEeCH-HHHHHHHHcCCCEeecCCCCC--cc---hhccCCCCCcEEEECCCchHHHHHHhh
Confidence            999999999999999 78888765 888888999998888766543  32   334444 899999999852 2333444


Q ss_pred             HHhhCCCceEEEEcCCCCCceeec---chhhhccccEEEEEeccCCCCCCCHHHHHHHHHccCCCCCCceeeeeccccHH
Q 018529          258 ECVHDGWGVAVLVGVPSKDAVFMT---KPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEIN  334 (354)
Q Consensus       258 ~~l~~~~g~~v~~g~~~~~~~~~~---~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~l~~~~  334 (354)
                      ..++++ |+++.+|..........   ..........+.......  ..+.+.++++++.++++.+  .+++.|+++++.
T Consensus       228 ~~l~~~-g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~i~  302 (319)
T cd08267         228 LALKPG-GRYVSVGGGPSGLLLVLLLLPLTLGGGGRRLKFFLAKP--NAEDLEQLAELVEEGKLKP--VIDSVYPLEDAP  302 (319)
T ss_pred             hccCCC-CEEEEeccccccccccccccchhhccccceEEEEEecC--CHHHHHHHHHHHHCCCeee--eeeeEEcHHHHH
Confidence            458997 99999987543222111   011111122222222111  1456888999999887654  367889999999


Q ss_pred             HHHHHHhcCCc-eeEE
Q 018529          335 KAFEYMVKGEG-LRCI  349 (354)
Q Consensus       335 ~a~~~~~~~~~-~k~v  349 (354)
                      +|++.+.+++. +|++
T Consensus       303 ~a~~~~~~~~~~~~vv  318 (319)
T cd08267         303 EAYRRLKSGRARGKVV  318 (319)
T ss_pred             HHHHHHhcCCCCCcEe
Confidence            99999987665 4655

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05195 enoyl_red enoyl reductase of polyketide synthase

Probab=100.00  E-value=1.1e-31  Score=238.53  Aligned_cols=281  Identities=22%  Similarity=0.285  Sum_probs=227.4

Q ss_pred             CeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCEEEecccCCCCCCcccccCCCCCCc
Q 018529           36 MEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPV  115 (354)
Q Consensus        36 ~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~  115 (354)
                      +|++||+.++++|++|+....+..  ..+|.++|||++|+|+++|++++++++||+|++.                    
T Consensus         1 ~~v~i~v~~~~~~~~d~~~~~g~~--~~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~--------------------   58 (293)
T cd05195           1 DEVEVEVKAAGLNFRDVLVALGLL--PGDETPLGLECSGIVTRVGSGVTGLKVGDRVMGL--------------------   58 (293)
T ss_pred             CceEEEEEEEecCHHHHHHHhCCC--CCCCCccceeeeEEEEeecCCccCCCCCCEEEEE--------------------
Confidence            589999999999999999887643  2357889999999999999999999999999865                    


Q ss_pred             ccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhcCCCCCCeEEEEcC-ChhHHHHHHHHHHcCC
Q 018529          116 NHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGA  194 (354)
Q Consensus       116 ~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vlI~G~-g~~G~~a~~~a~~~g~  194 (354)
                          ..|+|++|+.++.+.++++|+.+++.+++.+++++.++|.++.+...+++|++|+|+|+ |.+|++++++|+..|+
T Consensus        59 ----~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~g~~g~~~~~~a~~~g~  134 (293)
T cd05195          59 ----APGAFATHVRVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARLQKGESVLIHAAAGGVGQAAIQLAQHLGA  134 (293)
T ss_pred             ----ecCcccceEEechhheEeCCCCCCHHHHhhchHHHHHHHHHHHHHhccCCCCEEEEecCCCHHHHHHHHHHHHcCC
Confidence                35799999999999999999999999999999999999999877789999999999975 9999999999999999


Q ss_pred             cEEEEEcCChhhHHHHHhcC--CceEEcCCCCChhHHHHHHHHcCC-CccEEEEcccChHhHHHHHHHhhCCCceEEEEc
Q 018529          195 SRIIGVDRSSKRFEEAKKFG--VTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVG  271 (354)
Q Consensus       195 ~~vi~v~~~~~~~~~~~~lg--~~~v~~~~~~~~~~~~~i~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g  271 (354)
                       +|+++++++++.++++++|  ++.+++..+.+  +.+.+.+.+.+ ++|++++++|+. .+..++++++++ |+++.+|
T Consensus       135 -~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~~~-g~~v~~g  209 (293)
T cd05195         135 -EVFATVGSEEKREFLRELGGPVDHIFSSRDLS--FADGILRATGGRGVDVVLNSLSGE-LLRASWRCLAPF-GRFVEIG  209 (293)
T ss_pred             -EEEEEeCCHHHHHHHHHhCCCcceEeecCchh--HHHHHHHHhCCCCceEEEeCCCch-HHHHHHHhcccC-ceEEEee
Confidence             8999989999999998888  67777665443  77788888766 899999999984 889999999997 9999998


Q ss_pred             CCCCCceeecchhhhccccEEEEEeccCCC--C----CCCHHHHHHHHHccCCCCCCceeeeeccccHHHHHHHHhcCCc
Q 018529          272 VPSKDAVFMTKPINVLNERTLKGTFFGNYK--P----RTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG  345 (354)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~--~----~~~~~~~~~~~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~  345 (354)
                      ..............+.+++++.........  .    .+.+.++++++.++++.  +..++.++++++.++++.+.+++.
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~a~~~~~~~~~  287 (293)
T cd05195         210 KRDILSNSKLGMRPFLRNVSFSSVDLDQLARERPELLRELLREVLELLEAGVLK--PLPPTVVPSASEIDAFRLMQSGKH  287 (293)
T ss_pred             ccccccCCccchhhhccCCeEEEEeHHHHhhhChHHHHHHHHHHHHHHHCCCcc--cCCCeeechhhHHHHHHHHhcCCC
Confidence            654221112222223355566554432211  0    12466788888888665  345678999999999999987765


Q ss_pred             -eeEE
Q 018529          346 -LRCI  349 (354)
Q Consensus       346 -~k~v  349 (354)
                       +|++
T Consensus       288 ~~~iv  292 (293)
T cd05195         288 IGKVV  292 (293)
T ss_pred             Cceec
Confidence             4655

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase

>smart00829 PKS_ER Enoylreductase

Probab=100.00  E-value=5e-31  Score=233.87  Aligned_cols=276  Identities=21%  Similarity=0.323  Sum_probs=223.4

Q ss_pred             EEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCEEEecccCCCCCCcccccCCCCCCccccc
Q 018529           40 IKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFL  119 (354)
Q Consensus        40 V~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~  119 (354)
                      ||+.++++|++|+....+..+   .|.++|||++|+|+++|++++.|++||+|++.                        
T Consensus         2 i~v~~~~i~~~d~~~~~g~~~---~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~------------------------   54 (288)
T smart00829        2 VEVRAAGLNFRDVLIALGLLP---GEAVLGGECAGVVTRVGPGVTGLAVGDRVMGL------------------------   54 (288)
T ss_pred             eeEEEEecCHHHHHHhcCCCC---CCCCCCceeEEEEEeeCCCCcCCCCCCEEEEE------------------------
Confidence            899999999999998876433   26789999999999999999999999999865                        


Q ss_pred             ccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhcCCCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEE
Q 018529          120 GTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRII  198 (354)
Q Consensus       120 ~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi  198 (354)
                      ..|+|++|+.++.+.++++|+++++.+++.+++++.++|+++.+...+++|++|+|+|+ |.+|.+++++|+..|+ +|+
T Consensus        55 ~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~~~~g~~~~~~a~~~g~-~v~  133 (288)
T smart00829       55 APGSFATYVRTDARLVVPIPDGLSFEEAATVPVVFLTAYYALVDLARLRPGESVLIHAAAGGVGQAAIQLAQHLGA-EVF  133 (288)
T ss_pred             cCCceeeEEEccHHHeEECCCCCCHHHHHhchHHHHHHHHHHHHHhCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEE
Confidence            34799999999999999999999999999999999999998777888999999999985 9999999999999999 899


Q ss_pred             EEcCChhhHHHHHhcCC--ceEEcCCCCChhHHHHHHHHcCC-CccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCC
Q 018529          199 GVDRSSKRFEEAKKFGV--TDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSK  275 (354)
Q Consensus       199 ~v~~~~~~~~~~~~lg~--~~v~~~~~~~~~~~~~i~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~  275 (354)
                      ++++++++.+.++++|+  +.++++.+.+  +.+.+.+..++ ++|+++|++|+ .....++++++++ |+++.+|....
T Consensus       134 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~d~vi~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~  209 (288)
T smart00829      134 ATAGSPEKRDFLRELGIPDDHIFSSRDLS--FADEILRATGGRGVDVVLNSLAG-EFLDASLRCLAPG-GRFVEIGKRDI  209 (288)
T ss_pred             EEeCCHHHHHHHHHcCCChhheeeCCCcc--HHHHHHHHhCCCCcEEEEeCCCH-HHHHHHHHhccCC-cEEEEEcCcCC
Confidence            99999999999999998  6777766544  77778777766 89999999986 7788899999997 99999986532


Q ss_pred             CceeecchhhhccccEEEEEeccCCC-----CCCCHHHHHHHHHccCCCCCCceeeeeccccHHHHHHHHhcCCc-eeEE
Q 018529          276 DAVFMTKPINVLNERTLKGTFFGNYK-----PRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCI  349 (354)
Q Consensus       276 ~~~~~~~~~~~~~~~~i~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~v  349 (354)
                      ..........+.+++++.+.......     ..+.+..+++++.++++.+.  ..+.|+++++.++++.+.+++. +|++
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~iv  287 (288)
T smart00829      210 RDNSQLGMAPFRRNVSYHAVDLDALEEGPDRIRELLAEVLELFAEGVLRPL--PVTVFPISDVEDAFRYMQQGKHIGKVV  287 (288)
T ss_pred             ccccccchhhhcCCceEEEEEHHHhhcChHHHHHHHHHHHHHHHCCCccCc--CceEEcHHHHHHHHHHHhcCCCcceEe
Confidence            11112222223456666665432211     01235677888888876653  4578999999999999988765 4655

Enoylreductase in Polyketide synthases.

>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

Probab=99.97  E-value=5.9e-29  Score=219.93  Aligned_cols=247  Identities=27%  Similarity=0.416  Sum_probs=196.3

Q ss_pred             CCCcccccceeEEEEEeCCCCCCCCCCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCC
Q 018529           63 LFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLA  142 (354)
Q Consensus        63 ~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~  142 (354)
                      ++|.++|||++|+|+++|+++++|++||+|++.                          +.|++|++++.+.++++|+++
T Consensus        19 ~~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~~--------------------------~~~~~~~~v~~~~~~~ip~~l   72 (277)
T cd08255          19 PLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFCF--------------------------GPHAERVVVPANLLVPLPDGL   72 (277)
T ss_pred             cCCcccCcceeEEEEEeCCCCCCCCCCCEEEec--------------------------CCcceEEEcCHHHeeECcCCC
Confidence            478999999999999999999999999999865                          369999999999999999999


Q ss_pred             CccchhhcccchhhhhhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcC-CceEEcC
Q 018529          143 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG-VTDFVNT  221 (354)
Q Consensus       143 ~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg-~~~v~~~  221 (354)
                      ++.+++.+ +++.+||+++ ...++++++++||+|+|.+|++++++|+.+|.++|+++++++++.++++++| .+.++..
T Consensus        73 ~~~~aa~~-~~~~ta~~~~-~~~~~~~g~~vlI~g~g~vg~~~i~~a~~~g~~~vi~~~~~~~~~~~~~~~g~~~~~~~~  150 (277)
T cd08255          73 PPERAALT-ALAATALNGV-RDAEPRLGERVAVVGLGLVGLLAAQLAKAAGAREVVGVDPDAARRELAEALGPADPVAAD  150 (277)
T ss_pred             CHHHhHHH-HHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEECCCHHHHHHHHHcCCCcccccc
Confidence            99999988 7899999986 5789999999999988999999999999999944999999999999999999 4544433


Q ss_pred             CCCChhHHHHHHHHcCCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhhccccEEEEEeccCC-
Q 018529          222 SEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNY-  300 (354)
Q Consensus       222 ~~~~~~~~~~i~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~-  300 (354)
                      .+.         ....+++|++||+++....+..++++++++ |+++.+|..... ..........+.+++.+...... 
T Consensus       151 ~~~---------~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~-g~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  219 (277)
T cd08255         151 TAD---------EIGGRGADVVIEASGSPSALETALRLLRDR-GRVVLVGWYGLK-PLLLGEEFHFKRLPIRSSQVYGIG  219 (277)
T ss_pred             chh---------hhcCCCCCEEEEccCChHHHHHHHHHhcCC-cEEEEEeccCCC-ccccHHHHHhccCeEEeecccccc
Confidence            211         112238999999998778889999999997 999999876533 11111111225556666554321 


Q ss_pred             --------CCCCCHHHHHHHHHccCCCCCCceeeeeccccHHHHHHHHhcCC--ceeEEE
Q 018529          301 --------KPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGE--GLRCII  350 (354)
Q Consensus       301 --------~~~~~~~~~~~~~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~--~~k~vi  350 (354)
                              ...+.++++++++.++++..  .+.+.|+++++++|++.+.+++  ..|+++
T Consensus       220 ~~~~~~~~~~~~~~~~~~~l~~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~~k~~~  277 (277)
T cd08255         220 RYDRPRRWTEARNLEEALDLLAEGRLEA--LITHRVPFEDAPEAYRLLFEDPPECLKVVL  277 (277)
T ss_pred             cccccccccccccHHHHHHHHHcCCccc--cccCccCHHHHHHHHHHHHcCCccceeeeC
Confidence                    11246889999999997554  3678899999999999998873  357654

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD

>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]

Probab=99.97  E-value=3.3e-28  Score=203.39  Aligned_cols=295  Identities=18%  Similarity=0.198  Sum_probs=224.5

Q ss_pred             EEEeecCC-CCCCeEEEEEeeeecCccchhhhccCCCC-CCCCccccc----ceeEEEEEeCCCCCCCCCCCEEEecccC
Q 018529           25 IQDVEVAP-PQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGH----EAAGVVESVGEGVSDLEVGDHVLPVFTG   98 (354)
Q Consensus        25 ~~~~~~p~-~~~~evlV~v~~~~i~~~D~~~~~~~~~~-~~~p~~~G~----e~~G~V~~vG~~~~~~~~Gd~V~~~~~~   98 (354)
                      ..+++++. +++++||||.+|.+..|...-.+..-.+. .-.|+.+|-    .++|+|++  |+.+++++||.|.+.   
T Consensus        26 ~~~~el~~~~~s~~vlvknlYLS~DPymR~rM~~~~~~~y~~~~~~G~pi~g~GV~kVi~--S~~~~~~~GD~v~g~---  100 (343)
T KOG1196|consen   26 TTTVELRVPLGSGEVLVKNLYLSCDPYMRIRMGKPDPSDYAPPYEPGKPIDGFGVAKVID--SGHPNYKKGDLVWGI---  100 (343)
T ss_pred             eeeecccCCCCCccEEeEeeeecCCHHHHhhccCCCcccccCcccCCcEecCCceEEEEe--cCCCCCCcCceEEEe---
Confidence            34455444 68999999999999866544333211111 112333332    67899998  467889999999866   


Q ss_pred             CCCCCcccccCCCCCCcccccccccceeeEEeeccc--eEECC--CCCCccchhh-cccchhhhhhhhhhhcCCCCCCeE
Q 018529           99 ECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGC--VAKIN--PLAPLDKVCI-LSCGVSTGLGATLNVAKPERGSSV  173 (354)
Q Consensus        99 ~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~--~~~~P--~~~~~~~aa~-l~~~~~~a~~~l~~~~~~~~~~~v  173 (354)
                                             =+|.||.+++++.  .+++|  .++++..... +..+.+|||..+++...+++|++|
T Consensus       101 -----------------------~gWeeysii~~~~~~~~ki~~~~~~pLs~ylg~lGm~glTAy~Gf~ei~~pk~geTv  157 (343)
T KOG1196|consen  101 -----------------------VGWEEYSVITPNDLEHFKIQHPTDVPLSYYLGLLGMPGLTAYAGFYEICSPKKGETV  157 (343)
T ss_pred             -----------------------ccceEEEEecCcchhcccCCCCCccCHhhhhhccCCchhHHHHHHHHhcCCCCCCEE
Confidence                                   2899999998753  34443  3444444333 677999999999999999999999


Q ss_pred             EEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh-cCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcccChH
Q 018529          174 AVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNID  251 (354)
Q Consensus       174 lI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~-lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~~~  251 (354)
                      +|.|| |++|+++.|+|+.+|+ +|+++..++||..+++. +|.+..+||+++. +..+++++..+.|+|+.||.+|+ .
T Consensus       158 ~VSaAsGAvGql~GQ~Ak~~Gc-~VVGsaGS~EKv~ll~~~~G~d~afNYK~e~-~~~~aL~r~~P~GIDiYfeNVGG-~  234 (343)
T KOG1196|consen  158 FVSAASGAVGQLVGQFAKLMGC-YVVGSAGSKEKVDLLKTKFGFDDAFNYKEES-DLSAALKRCFPEGIDIYFENVGG-K  234 (343)
T ss_pred             EEeeccchhHHHHHHHHHhcCC-EEEEecCChhhhhhhHhccCCccceeccCcc-CHHHHHHHhCCCcceEEEeccCc-H
Confidence            99987 9999999999999999 99999999999998855 7999999999873 38888999888899999999999 8


Q ss_pred             hHHHHHHHhhCCCceEEEEcCCCC---Cceeecchh--hhccccEEEEEeccCCCCC--CCHHHHHHHHHccCCCCCCce
Q 018529          252 NMISAFECVHDGWGVAVLVGVPSK---DAVFMTKPI--NVLNERTLKGTFFGNYKPR--TDLPSVVDMYMNKQLELEKFI  324 (354)
Q Consensus       252 ~~~~~~~~l~~~~g~~v~~g~~~~---~~~~~~~~~--~~~~~~~i~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~v  324 (354)
                      .+...+..|+.. ||++.+|..+.   +.+..+...  .+.|++.+.|+...++.+.  +.+..+..++++|+|+..+-+
T Consensus       235 ~lDavl~nM~~~-gri~~CG~ISqYN~~~~~~~~~l~~ii~Kr~~iqgflv~d~~d~~~k~ld~l~~~ikegKI~y~edi  313 (343)
T KOG1196|consen  235 MLDAVLLNMNLH-GRIAVCGMISQYNLENPEGLHNLSTIIYKRIRIQGFLVSDYLDKYPKFLDFLLPYIKEGKITYVEDI  313 (343)
T ss_pred             HHHHHHHhhhhc-cceEeeeeehhccccCCccccchhhheeeeEEeeeEEeechhhhhHHHHHHHHHHHhcCceEEehhH
Confidence            999999999996 99999997652   112222222  2348999999776555432  346778889999999876544


Q ss_pred             eeeeccccHHHHHHHHhcCCc-eeEEEecC
Q 018529          325 THRIPFSEINKAFEYMVKGEG-LRCIISME  353 (354)
Q Consensus       325 ~~~~~l~~~~~a~~~~~~~~~-~k~vi~~~  353 (354)
                      .  -+|+..++||.-+-+|.. +|.|+.+.
T Consensus       314 ~--~Glen~P~A~vglf~GkNvGKqiv~va  341 (343)
T KOG1196|consen  314 A--DGLENGPSALVGLFHGKNVGKQLVKVA  341 (343)
T ss_pred             H--HHHhccHHHHHHHhccCcccceEEEee
Confidence            3  358999999999998886 69888765

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=99.96  E-value=3.4e-29  Score=239.05  Aligned_cols=293  Identities=16%  Similarity=0.194  Sum_probs=242.1

Q ss_pred             eEEEEeecC---CCCCCeEEEEEeeeecCccchhhhccCCCCCCC-------CcccccceeEEEEEeCCCCCCCCCCCEE
Q 018529           23 LIIQDVEVA---PPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLF-------PRIFGHEAAGVVESVGEGVSDLEVGDHV   92 (354)
Q Consensus        23 l~~~~~~~p---~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~-------p~~~G~e~~G~V~~vG~~~~~~~~Gd~V   92 (354)
                      +++.+.+..   +..++.=+--|-|+.+|..|+.+..|+.+..-.       .+++|-|++|+          .+.|.||
T Consensus      1429 lrWies~~~~a~~~~~~~e~CtVYYAplNFRDiMLasGkL~~DAiPG~~a~qdclLGmEFsGR----------d~~GrRv 1498 (2376)
T KOG1202|consen 1429 LRWIESPLRHAQPTCPGLELCTVYYAPLNFRDIMLASGKLSPDAIPGDLASQDCLLGMEFSGR----------DASGRRV 1498 (2376)
T ss_pred             eeeeecchhhcCCCCCCCceeEEEeccccHHHHHHhcCCCCcccCCCccchhhheeceeeccc----------cCCCcEE
Confidence            666666654   235676789999999999999999987754333       47899999998          4569999


Q ss_pred             EecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhcCCCCCCe
Q 018529           93 LPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSS  172 (354)
Q Consensus        93 ~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~  172 (354)
                      ++..                       ..-++|+-+.+..+++|.+|++.++++|++.||.|+|+|+||..++..++|++
T Consensus      1499 M~mv-----------------------pAksLATt~l~~rd~lWevP~~WTleeAstVP~VYsTaYYALVvRG~mkkGek 1555 (2376)
T KOG1202|consen 1499 MGMV-----------------------PAKSLATTVLASRDFLWEVPSKWTLEEASTVPVVYSTAYYALVVRGQMKKGEK 1555 (2376)
T ss_pred             EEee-----------------------ehhhhhhhhhcchhhhhhCCcccchhhcccCceEeeeehhhhhhhccccCCcE
Confidence            8763                       33478999999999999999999999999999999999999999999999999


Q ss_pred             EEEE-cCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCceEEcCCCCChhHHHHHHHHcCC-CccEEEEc
Q 018529          173 VAVF-GLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVEC  246 (354)
Q Consensus       173 vlI~-G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~~~~~-~~dvv~d~  246 (354)
                      +||+ |+|++|++||.+|.+.|. .|+.+..++||++++.+    |...++-|.++.+  |..-+...|.| |+|+|+++
T Consensus      1556 iLIHaGsGGVGQAAIaiALa~G~-~VFTTVGSaEKRefL~~rFPqLqe~~~~NSRdts--FEq~vl~~T~GrGVdlVLNS 1632 (2376)
T KOG1202|consen 1556 ILIHAGSGGVGQAAIAIALAHGC-TVFTTVGSAEKREFLLKRFPQLQETNFANSRDTS--FEQHVLWHTKGRGVDLVLNS 1632 (2376)
T ss_pred             EEEecCCCchhHHHHHHHHHcCC-EEEEecCcHHHHHHHHHhchhhhhhccccccccc--HHHHHHHHhcCCCeeeehhh
Confidence            9999 569999999999999999 89999999999999865    3445556666665  88889999999 99999999


Q ss_pred             ccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhhccccEEEEEeccCCCC--CCCHHHHHHHHHccCC--CCCC
Q 018529          247 TGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKP--RTDLPSVVDMYMNKQL--ELEK  322 (354)
Q Consensus       247 ~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~--~~~~~~~~~~~~~~~~--~~~~  322 (354)
                      ... +-+..+++||+.+ |||..+|.-.-....++....+.+|.+++|..+.....  .+++.++..++++|.-  .+.|
T Consensus      1633 Lae-EkLQASiRCLa~~-GRFLEIGKfDLSqNspLGMavfLkNvsfHGiLLDsvmege~e~~~ev~~Lv~eGIksGvV~P 1710 (2376)
T KOG1202|consen 1633 LAE-EKLQASIRCLALH-GRFLEIGKFDLSQNSPLGMAVFLKNVSFHGILLDSVMEGEEEMWREVAALVAEGIKSGVVRP 1710 (2376)
T ss_pred             hhH-HHHHHHHHHHHhc-CeeeeecceecccCCcchhhhhhcccceeeeehhhhhcCcHHHHHHHHHHHHhhhccCceec
Confidence            977 7899999999998 99999986543444456666677999999976533322  2467888888888733  3567


Q ss_pred             ceeeeeccccHHHHHHHHhcCCc-eeEEEecC
Q 018529          323 FITHRIPFSEINKAFEYMVKGEG-LRCIISME  353 (354)
Q Consensus       323 ~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~~~  353 (354)
                      +.+++|+-.++++||+.+.+|++ +|+||.+.
T Consensus      1711 L~ttvF~~~qvE~AFRfMasGKHIGKVvikvr 1742 (2376)
T KOG1202|consen 1711 LPTTVFHGQQVEDAFRFMASGKHIGKVVIKVR 1742 (2376)
T ss_pred             cccccccHHHHHHHHHHHhccCccceEEEEEc
Confidence            78899999999999999999998 59998764

>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1

Probab=99.88  E-value=4.8e-23  Score=155.20  Aligned_cols=104  Identities=35%  Similarity=0.573  Sum_probs=87.6

Q ss_pred             CCeEEEEEeeeecCccchhhhccC-CCCCCCCcccccceeEEEEEeCCCCCCCCCCCEEEecccCCCCCCcccccCCCC-
Q 018529           35 AMEVRIKIKYTSLCRTDLYFWESK-GQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRFSING-  112 (354)
Q Consensus        35 ~~evlV~v~~~~i~~~D~~~~~~~-~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~-  112 (354)
                      |+||||||.++|||++|++++.+. .....+|.++|||++|+|+++|+++++|++||+|++.+...|+.|++|..+... 
T Consensus         1 P~eVlVkv~a~gic~~D~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~   80 (109)
T PF08240_consen    1 PGEVLVKVRAAGICGSDLHIREGGPPPPPKFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNIGCGECEYCLSGRPNL   80 (109)
T ss_dssp             TTEEEEEEEEEEE-HHHHHHHTTSSSSTSSSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEEETSSSHHHHTTTGGG
T ss_pred             CCEEEEEEEEeeeCHHHHHHHhhccccCCCCCcccccceeeeeeeeccccccccccceeeeecccCccCchhhcCCcccc
Confidence            689999999999999999999984 455778999999999999999999999999999999999999999999755432 


Q ss_pred             ---CCcccccccccceeeEEeeccceEEC
Q 018529          113 ---EPVNHFLGTSTFSEYTVVHSGCVAKI  138 (354)
Q Consensus       113 ---~~~~~~~~~g~~a~~~~v~~~~~~~~  138 (354)
                         ....+....|+||||+.+|+++++|+
T Consensus        81 c~~~~~~g~~~~G~~aey~~v~~~~~~~v  109 (109)
T PF08240_consen   81 CPNPEVLGLGLDGGFAEYVVVPARNLVPV  109 (109)
T ss_dssp             TTTBEETTTSSTCSSBSEEEEEGGGEEEE
T ss_pred             CCCCCEeEcCCCCcccCeEEEehHHEEEC
Confidence               23344445699999999999999985

1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....

>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1

Probab=99.76  E-value=9.8e-18  Score=130.70  Aligned_cols=127  Identities=32%  Similarity=0.558  Sum_probs=111.7

Q ss_pred             hhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC-CccEEEEcccChHhHHHHHH
Q 018529          180 AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFE  258 (354)
Q Consensus       180 ~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~~dvv~d~~g~~~~~~~~~~  258 (354)
                      ++|++++|+|+.+|+ +|++++++++|+++++++|++.++++++.+  +.+++++++++ ++|+||||+|+++.++.+++
T Consensus         1 ~vG~~a~q~ak~~G~-~vi~~~~~~~k~~~~~~~Ga~~~~~~~~~~--~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~   77 (130)
T PF00107_consen    1 GVGLMAIQLAKAMGA-KVIATDRSEEKLELAKELGADHVIDYSDDD--FVEQIRELTGGRGVDVVIDCVGSGDTLQEAIK   77 (130)
T ss_dssp             HHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTESEEEETTTSS--HHHHHHHHTTTSSEEEEEESSSSHHHHHHHHH
T ss_pred             ChHHHHHHHHHHcCC-EEEEEECCHHHHHHHHhhcccccccccccc--cccccccccccccceEEEEecCcHHHHHHHHH
Confidence            589999999999996 999999999999999999999999998887  99999999998 99999999998899999999


Q ss_pred             HhhCCCceEEEEcCCCCCceeecchhh-hccccEEEEEeccCCCCCCCHHHHHHHHH
Q 018529          259 CVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNYKPRTDLPSVVDMYM  314 (354)
Q Consensus       259 ~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~~~  314 (354)
                      +++++ |+++.+|... .....++... +.+++++.|++.+.   .++++++++++.
T Consensus        78 ~l~~~-G~~v~vg~~~-~~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~~la  129 (130)
T PF00107_consen   78 LLRPG-GRIVVVGVYG-GDPISFNLMNLMFKEITIRGSWGGS---PEDFQEALQLLA  129 (130)
T ss_dssp             HEEEE-EEEEEESSTS-TSEEEEEHHHHHHTTEEEEEESSGG---HHHHHHHHHHHH
T ss_pred             HhccC-CEEEEEEccC-CCCCCCCHHHHHhCCcEEEEEccCC---HHHHHHHHHHhc
Confidence            99997 9999999987 3444554444 45999999998765   357888888875

1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=99.53  E-value=3e-13  Score=123.31  Aligned_cols=176  Identities=20%  Similarity=0.205  Sum_probs=134.5

Q ss_pred             hhhhhhhhcC-CCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHH
Q 018529          157 GLGATLNVAK-PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEM  235 (354)
Q Consensus       157 a~~~l~~~~~-~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~  235 (354)
                      .|.++.+..+ .-+|++|+|+|+|++|+.+++.++.+|+ +|++++.++.|.+.++++|+..+ +       ..+.+   
T Consensus       188 ~~~~i~r~t~~~l~GktVvViG~G~IG~~va~~ak~~Ga-~ViV~d~d~~R~~~A~~~G~~~~-~-------~~e~v---  255 (413)
T cd00401         188 LIDGIKRATDVMIAGKVAVVAGYGDVGKGCAQSLRGQGA-RVIVTEVDPICALQAAMEGYEVM-T-------MEEAV---  255 (413)
T ss_pred             hHHHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEECChhhHHHHHhcCCEEc-c-------HHHHH---
Confidence            3455555444 4789999999999999999999999999 89999999999999999998533 1       21222   


Q ss_pred             cCCCccEEEEcccChHhHHHH-HHHhhCCCceEEEEcCCCCCceeecchhhh-ccccEEEEEeccCCCCCCCHH--HHHH
Q 018529          236 TNGGVDRSVECTGNIDNMISA-FECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFFGNYKPRTDLP--SVVD  311 (354)
Q Consensus       236 ~~~~~dvv~d~~g~~~~~~~~-~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~~~~~~~~--~~~~  311 (354)
                        .++|+||+++|.+..+... +..++++ |+++.+|..  +.  .++...+ .+++++.+++....  ..+++  +.+.
T Consensus       256 --~~aDVVI~atG~~~~i~~~~l~~mk~G-gilvnvG~~--~~--eId~~~L~~~el~i~g~~~~~~--~~~~~~g~aI~  326 (413)
T cd00401         256 --KEGDIFVTTTGNKDIITGEHFEQMKDG-AIVCNIGHF--DV--EIDVKGLKENAVEVVNIKPQVD--RYELPDGRRII  326 (413)
T ss_pred             --cCCCEEEECCCCHHHHHHHHHhcCCCC-cEEEEeCCC--CC--ccCHHHHHhhccEEEEccCCcc--eEEcCCcchhh
Confidence              2589999999998888876 9999997 999999854  22  2333333 37888888764321  22455  7899


Q ss_pred             HHHccCC-CCCCceeee-----eccc-cHHHHHHHHhcCCc--eeEEEecC
Q 018529          312 MYMNKQL-ELEKFITHR-----IPFS-EINKAFEYMVKGEG--LRCIISME  353 (354)
Q Consensus       312 ~~~~~~~-~~~~~v~~~-----~~l~-~~~~a~~~~~~~~~--~k~vi~~~  353 (354)
                      ++.+|++ ++...++|.     ++|+ |+.++++.+.++..  .|+++.++
T Consensus       327 LLa~Grlvnl~~~~gH~~~vmd~sf~~q~l~a~~l~~~~~~~~~kV~~~p~  377 (413)
T cd00401         327 LLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWTNRDKYEVGVYFLPK  377 (413)
T ss_pred             hhhCcCCCCCcccCCCccceechhHHHHHHHHHHHHhcCCcCCCcEEECCH
Confidence            9999988 888888898     9999 99999999987664  47776653

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=99.43  E-value=2.9e-12  Score=119.86  Aligned_cols=155  Identities=18%  Similarity=0.161  Sum_probs=112.8

Q ss_pred             CCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceE-EcCCCCC-----------hhHHHHHH
Q 018529          166 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHD-----------RPIQEVIA  233 (354)
Q Consensus       166 ~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v-~~~~~~~-----------~~~~~~i~  233 (354)
                      +..++++|+|+|+|++|+++++.|+.+|+ .|++++.++++++.++++|++.+ ++..+.+           .++.+..+
T Consensus       161 G~~pg~kVlViGaG~iGL~Ai~~Ak~lGA-~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~  239 (509)
T PRK09424        161 GKVPPAKVLVIGAGVAGLAAIGAAGSLGA-IVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEM  239 (509)
T ss_pred             CCcCCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHH
Confidence            35789999999999999999999999999 89999999999999999999854 5543321           12333333


Q ss_pred             HH-cC--CCccEEEEcccCh-----Hh-HHHHHHHhhCCCceEEEEcCCCCCc-eeecchhh-hc-cccEEEEEeccCCC
Q 018529          234 EM-TN--GGVDRSVECTGNI-----DN-MISAFECVHDGWGVAVLVGVPSKDA-VFMTKPIN-VL-NERTLKGTFFGNYK  301 (354)
Q Consensus       234 ~~-~~--~~~dvv~d~~g~~-----~~-~~~~~~~l~~~~g~~v~~g~~~~~~-~~~~~~~~-~~-~~~~i~g~~~~~~~  301 (354)
                      +. .+  +++|+||+|+|.+     .. .+.+++.++++ |+++.++...++. ........ +. +++++.|.+.  . 
T Consensus       240 ~~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpG-gvIVdvg~~~GG~~e~t~~~~~v~~~~gVti~Gv~n--~-  315 (509)
T PRK09424        240 ALFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPG-SVIVDLAAENGGNCELTVPGEVVVTDNGVTIIGYTD--L-  315 (509)
T ss_pred             HHHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCC-CEEEEEccCCCCCcccccCccceEeECCEEEEEeCC--C-
Confidence            32 33  3799999999963     35 49999999997 9999999853221 22222222 33 7899998763  2 


Q ss_pred             CCCCHHHHHHHHHccCCCCCCcee
Q 018529          302 PRTDLPSVVDMYMNKQLELEKFIT  325 (354)
Q Consensus       302 ~~~~~~~~~~~~~~~~~~~~~~v~  325 (354)
                      ..+...++.+++.++.+.+.++++
T Consensus       316 P~~~p~~As~lla~~~i~l~~lIt  339 (509)
T PRK09424        316 PSRLPTQSSQLYGTNLVNLLKLLC  339 (509)
T ss_pred             chhHHHHHHHHHHhCCccHHHHhc
Confidence            223334689999999877665554

>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A

Probab=99.26  E-value=1e-12  Score=101.83  Aligned_cols=119  Identities=18%  Similarity=0.331  Sum_probs=76.7

Q ss_pred             cCCceEEcCCCCChhHHHHHHHHcCCCccEEEEccc--ChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhh-ccc
Q 018529          213 FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG--NIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNE  289 (354)
Q Consensus       213 lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g--~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~  289 (354)
                      ||++++++|++.+  +      ...+++|+|||++|  +...+..++++| ++ |+++.++.       ....... .+.
T Consensus         1 LGAd~vidy~~~~--~------~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~-G~~v~i~~-------~~~~~~~~~~~   63 (127)
T PF13602_consen    1 LGADEVIDYRDTD--F------AGPGGVDVVIDTVGQTGESLLDASRKLL-PG-GRVVSIGG-------DLPSFARRLKG   63 (127)
T ss_dssp             CT-SEEEETTCSH--H------HTTS-EEEEEESS-CCHHHCGGGCCCTE-EE-EEEEEE-S-------HHHHHHHHHHC
T ss_pred             CCcCEEecCCCcc--c------cCCCCceEEEECCCCccHHHHHHHHHHC-CC-CEEEEECC-------cccchhhhhcc
Confidence            6999999998543  4      22348999999999  655567888888 97 99998874       1111111 122


Q ss_pred             cEEEEEeccC--CC--CCCCHHHHHHHHHccCCCCCCceeeeeccccHHHHHHHHhcCCc-eeEEE
Q 018529          290 RTLKGTFFGN--YK--PRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCII  350 (354)
Q Consensus       290 ~~i~g~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi  350 (354)
                      ..+...++..  ..  ..+.++++++++.+|++++.  +.++|||+++++|++.+++++. ||+||
T Consensus        64 ~~~~~~~~~~~~~~~~~~~~l~~l~~l~~~G~l~~~--i~~~f~l~~~~~A~~~l~~~~~~GKvVl  127 (127)
T PF13602_consen   64 RSIRYSFLFSVDPNAIRAEALEELAELVAEGKLKPP--IDRVFPLEEAPEAHERLESGHARGKVVL  127 (127)
T ss_dssp             HHCEEECCC-H--HHHHHHHHHHHHHHHHTTSS-----EEEEEEGGGHHHHHHHHHCT--SSEEEE
T ss_pred             cceEEEEEEecCCCchHHHHHHHHHHHHHCCCeEEe--eccEECHHHHHHHHHHHHhCCCCCeEeC
Confidence            2333333321  10  12358999999999976665  8889999999999999999886 68886

>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed

Probab=98.79  E-value=1.1e-07  Score=83.60  Aligned_cols=167  Identities=17%  Similarity=0.246  Sum_probs=104.4

Q ss_pred             hcCCCCCCeEEEEcCChhHHHHHHHHHHcCCc-EEEEEcCChhhHHHHHh----cCCceEEcCCCCChhHHHHHHHHcCC
Q 018529          164 VAKPERGSSVAVFGLGAVGLAAAEGARIAGAS-RIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTNG  238 (354)
Q Consensus       164 ~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~-~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~~~~~  238 (354)
                      .+.++++++||.+|+|. |..++++++..|.. +|++++.+++..+.+++    ++...+... ..+  +.+ + .+..+
T Consensus        72 ~~~~~~g~~VLDiG~G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~~~-~~d--~~~-l-~~~~~  145 (272)
T PRK11873         72 LAELKPGETVLDLGSGG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNVEFR-LGE--IEA-L-PVADN  145 (272)
T ss_pred             hccCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCEEEE-Ecc--hhh-C-CCCCC
Confidence            46789999999999988 98888888887753 79999999999988876    344332111 111  111 1 12234


Q ss_pred             CccEEEEcc------cChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhhccccEEEEEeccCCCCCCCHHHHHHH
Q 018529          239 GVDRSVECT------GNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDM  312 (354)
Q Consensus       239 ~~dvv~d~~------g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~  312 (354)
                      .||+|+...      .....+..+.+.|+++ |++++.+..... .  +. ..+.+...+.+......   ....++.++
T Consensus       146 ~fD~Vi~~~v~~~~~d~~~~l~~~~r~LkpG-G~l~i~~~~~~~-~--~~-~~~~~~~~~~~~~~~~~---~~~~e~~~~  217 (272)
T PRK11873        146 SVDVIISNCVINLSPDKERVFKEAFRVLKPG-GRFAISDVVLRG-E--LP-EEIRNDAELYAGCVAGA---LQEEEYLAM  217 (272)
T ss_pred             ceeEEEEcCcccCCCCHHHHHHHHHHHcCCC-cEEEEEEeeccC-C--CC-HHHHHhHHHHhccccCC---CCHHHHHHH
Confidence            799998543      2346789999999997 999987755422 1  11 11222222222211111   245666676


Q ss_pred             HHc-cCCCCCCceeeeeccccHHHHHHHH--hcCC
Q 018529          313 YMN-KQLELEKFITHRIPFSEINKAFEYM--VKGE  344 (354)
Q Consensus       313 ~~~-~~~~~~~~v~~~~~l~~~~~a~~~~--~~~~  344 (354)
                      +.+ |-..+.....+.++++++.++++.+  .+++
T Consensus       218 l~~aGf~~v~i~~~~~~~l~~~~~~~~~~~~~~~~  252 (272)
T PRK11873        218 LAEAGFVDITIQPKREYRIPDAREFLEDWGIAPGR  252 (272)
T ss_pred             HHHCCCCceEEEeccceecccHHHHHHHhcccccc
Confidence            666 3333333345678899999999988  5444

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=98.71  E-value=5.1e-07  Score=84.67  Aligned_cols=107  Identities=21%  Similarity=0.223  Sum_probs=81.8

Q ss_pred             CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEE-cCCCC-----------ChhHHHHHHHH
Q 018529          168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFV-NTSEH-----------DRPIQEVIAEM  235 (354)
Q Consensus       168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~-~~~~~-----------~~~~~~~i~~~  235 (354)
                      .++++|+|+|+|.+|++++++|+.+|+ .|++++.+.++++.++++|.+.+. +..++           +.++.+...+.
T Consensus       162 vp~akVlViGaG~iGl~Aa~~ak~lGA-~V~v~d~~~~rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~  240 (511)
T TIGR00561       162 VPPAKVLVIGAGVAGLAAIGAANSLGA-IVRAFDTRPEVKEQVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMEL  240 (511)
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEeccccccccccccceeecCHHHHHHHHHH
Confidence            467999999999999999999999999 799999999999999999987643 32110           11233333332


Q ss_pred             cC---CCccEEEEcc---cChH---hHHHHHHHhhCCCceEEEEcCCCCC
Q 018529          236 TN---GGVDRSVECT---GNID---NMISAFECVHDGWGVAVLVGVPSKD  276 (354)
Q Consensus       236 ~~---~~~dvv~d~~---g~~~---~~~~~~~~l~~~~g~~v~~g~~~~~  276 (354)
                      ..   .++|+||+|+   |.+.   ..+..++.++++ +.++.++...++
T Consensus       241 ~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpG-svIVDlA~d~GG  289 (511)
T TIGR00561       241 FAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAG-SVIVDLAAEQGG  289 (511)
T ss_pred             HHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCC-CEEEEeeeCCCC
Confidence            22   3799999999   6533   567889999997 999999876544

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=98.52  E-value=4.3e-09  Score=97.78  Aligned_cols=160  Identities=18%  Similarity=0.193  Sum_probs=104.8

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEE---C-CCCC
Q 018529           67 IFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAK---I-NPLA  142 (354)
Q Consensus        67 ~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~---~-P~~~  142 (354)
                      .-|.|+++.+.+|+++.++     +|++.+.+ |++|.+|..........+..-.+.|++++.++. .+..   + +..+
T Consensus        89 ~~~~~a~~hl~~Va~GldS-----~V~GE~qI-~gQvk~a~~~a~~~~~~g~~l~~lf~~a~~~~k-~vr~~t~i~~~~v  161 (417)
T TIGR01035        89 LTGESAVEHLFRVASGLDS-----MVVGETQI-LGQVKNAYKVAQEEKTVGKVLERLFQKAFSVGK-RVRTETDISAGAV  161 (417)
T ss_pred             cCchHHHHHHHHHHhhhhh-----hhcCChHH-HHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhh-hhhhhcCCCCCCc
Confidence            3588999999999998775     77888888 899998843221211222233478999988876 3332   2 2222


Q ss_pred             CccchhhcccchhhhhhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHH-HHHhcCCceEEcC
Q 018529          143 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFE-EAKKFGVTDFVNT  221 (354)
Q Consensus       143 ~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~-~~~~lg~~~v~~~  221 (354)
                      |...+|         .....+..+..++++|+|+|+|.+|.++++.++..|+.+|++++++.++.+ +++++|.. .+..
T Consensus       162 Sv~~~A---------v~la~~~~~~l~~~~VlViGaG~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~-~i~~  231 (417)
T TIGR01035       162 SISSAA---------VELAERIFGSLKGKKALLIGAGEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGE-AVKF  231 (417)
T ss_pred             CHHHHH---------HHHHHHHhCCccCCEEEEECChHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCe-EeeH
Confidence            222111         111123334467899999999999999999999999668999999988754 66777763 2222


Q ss_pred             CCCChhHHHHHHHHcCCCccEEEEcccChHh
Q 018529          222 SEHDRPIQEVIAEMTNGGVDRSVECTGNIDN  252 (354)
Q Consensus       222 ~~~~~~~~~~i~~~~~~~~dvv~d~~g~~~~  252 (354)
                      .    ++.+.+     .++|+||+|++.+..
T Consensus       232 ~----~l~~~l-----~~aDvVi~aT~s~~~  253 (417)
T TIGR01035       232 E----DLEEYL-----AEADIVISSTGAPHP  253 (417)
T ss_pred             H----HHHHHH-----hhCCEEEECCCCCCc
Confidence            1    122222     258999999987653

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=98.50  E-value=2.6e-06  Score=78.47  Aligned_cols=104  Identities=26%  Similarity=0.272  Sum_probs=80.2

Q ss_pred             hhhhhhhhhcCCC-CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHH
Q 018529          156 TGLGATLNVAKPE-RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAE  234 (354)
Q Consensus       156 ~a~~~l~~~~~~~-~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~  234 (354)
                      ..|.++.+..++. +|++|+|+|.|.+|...++.++.+|+ +|+++++++.+...+...|+. +.+       +.+.+  
T Consensus       197 s~~~ai~rat~~~l~Gk~VlViG~G~IG~~vA~~lr~~Ga-~ViV~d~dp~ra~~A~~~G~~-v~~-------l~eal--  265 (425)
T PRK05476        197 SLLDGIKRATNVLIAGKVVVVAGYGDVGKGCAQRLRGLGA-RVIVTEVDPICALQAAMDGFR-VMT-------MEEAA--  265 (425)
T ss_pred             hhHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCchhhHHHHhcCCE-ecC-------HHHHH--
Confidence            3455554443544 89999999999999999999999999 899999998887777667764 221       22222  


Q ss_pred             HcCCCccEEEEcccChHhHH-HHHHHhhCCCceEEEEcCCC
Q 018529          235 MTNGGVDRSVECTGNIDNMI-SAFECVHDGWGVAVLVGVPS  274 (354)
Q Consensus       235 ~~~~~~dvv~d~~g~~~~~~-~~~~~l~~~~g~~v~~g~~~  274 (354)
                         .++|+||+++|....+. ..+..++++ +.++..|...
T Consensus       266 ---~~aDVVI~aTG~~~vI~~~~~~~mK~G-ailiNvG~~d  302 (425)
T PRK05476        266 ---ELGDIFVTATGNKDVITAEHMEAMKDG-AILANIGHFD  302 (425)
T ss_pred             ---hCCCEEEECCCCHHHHHHHHHhcCCCC-CEEEEcCCCC
Confidence               25899999999877776 678889997 8998888754

>TIGR00936 ahcY adenosylhomocysteinase

Probab=98.35  E-value=7.3e-06  Score=75.10  Aligned_cols=103  Identities=28%  Similarity=0.314  Sum_probs=79.4

Q ss_pred             hhhhhhhhcC-CCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHH
Q 018529          157 GLGATLNVAK-PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEM  235 (354)
Q Consensus       157 a~~~l~~~~~-~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~  235 (354)
                      .+.++.+..+ ..+|++|+|+|.|.+|...++.++.+|+ +|++++.++.+...+...|+. +.+       ..+.+   
T Consensus       181 ~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~ak~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~-------leeal---  248 (406)
T TIGR00936       181 TIDGILRATNLLIAGKTVVVAGYGWCGKGIAMRARGMGA-RVIVTEVDPIRALEAAMDGFR-VMT-------MEEAA---  248 (406)
T ss_pred             HHHHHHHhcCCCCCcCEEEEECCCHHHHHHHHHHhhCcC-EEEEEeCChhhHHHHHhcCCE-eCC-------HHHHH---
Confidence            4444444434 4789999999999999999999999999 899999888887777777763 221       22222   


Q ss_pred             cCCCccEEEEcccChHhHHH-HHHHhhCCCceEEEEcCCC
Q 018529          236 TNGGVDRSVECTGNIDNMIS-AFECVHDGWGVAVLVGVPS  274 (354)
Q Consensus       236 ~~~~~dvv~d~~g~~~~~~~-~~~~l~~~~g~~v~~g~~~  274 (354)
                        .+.|+||+++|....++. .+..++++ +.++.+|...
T Consensus       249 --~~aDVVItaTG~~~vI~~~~~~~mK~G-ailiN~G~~~  285 (406)
T TIGR00936       249 --KIGDIFITATGNKDVIRGEHFENMKDG-AIVANIGHFD  285 (406)
T ss_pred             --hcCCEEEECCCCHHHHHHHHHhcCCCC-cEEEEECCCC
Confidence              247999999999887774 88889996 9999998754

This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=98.34  E-value=1.6e-08  Score=94.38  Aligned_cols=158  Identities=21%  Similarity=0.172  Sum_probs=96.4

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEecccCCCCCCcccccCCCCCCcccc---cccccceeeEEeeccceEECCCCCC
Q 018529           67 IFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHF---LGTSTFSEYTVVHSGCVAKINPLAP  143 (354)
Q Consensus        67 ~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~---~~~g~~a~~~~v~~~~~~~~P~~~~  143 (354)
                      .-|+|+++.+.+|+++.++     .|++.+.+ |++|...   +..+...+.   .-.+.|++.+.++        ..+.
T Consensus        91 ~~g~ea~~hl~~V~~GldS-----~V~GE~qI-lgQvk~a---~~~a~~~g~~g~~l~~lf~~a~~~~--------k~v~  153 (423)
T PRK00045         91 HEGEEAVRHLFRVASGLDS-----MVLGEPQI-LGQVKDA---YALAQEAGTVGTILNRLFQKAFSVA--------KRVR  153 (423)
T ss_pred             cCCHHHHHHHHHHHhhhhh-----hhcCChHH-HHHHHHH---HHHHHHcCCchHHHHHHHHHHHHHH--------hhHh
Confidence            3599999999999999876     44444444 3333321   111111111   1224565544443        3333


Q ss_pred             ccchhhcccchhhhhhhhhhhc---CCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHH-HHHhcCCceEE
Q 018529          144 LDKVCILSCGVSTGLGATLNVA---KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFE-EAKKFGVTDFV  219 (354)
Q Consensus       144 ~~~aa~l~~~~~~a~~~l~~~~---~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~-~~~~lg~~~v~  219 (354)
                      .+.+ ....+.+.+++++....   ...++++|+|+|+|.+|.++++.++..|+.+|++++++.++.+ +++++|.. ++
T Consensus       154 ~~t~-i~~~~~Sv~~~Av~~a~~~~~~~~~~~vlViGaG~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~~-~~  231 (423)
T PRK00045        154 TETG-IGAGAVSVASAAVELAKQIFGDLSGKKVLVIGAGEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGGE-AI  231 (423)
T ss_pred             hhcC-CCCCCcCHHHHHHHHHHHhhCCccCCEEEEECchHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCc-Ee
Confidence            2222 22224555666643222   1257899999999999999999999999878999999988855 67778753 33


Q ss_pred             cCCCCChhHHHHHHHHcCCCccEEEEcccChHh
Q 018529          220 NTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDN  252 (354)
Q Consensus       220 ~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~~~~  252 (354)
                      .+.    ++.+.+     .++|+||+|+|.+..
T Consensus       232 ~~~----~~~~~l-----~~aDvVI~aT~s~~~  255 (423)
T PRK00045        232 PLD----ELPEAL-----AEADIVISSTGAPHP  255 (423)
T ss_pred             eHH----HHHHHh-----ccCCEEEECCCCCCc
Confidence            221    122222     258999999987543

>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed

Probab=98.34  E-value=1.4e-05  Score=69.36  Aligned_cols=131  Identities=20%  Similarity=0.180  Sum_probs=84.4

Q ss_pred             cceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcC
Q 018529          123 TFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDR  202 (354)
Q Consensus       123 ~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~  202 (354)
                      +|.+|.. +...++.+++++++..+..-. +.. .+..+.  ..+.++++||-+|+|. |.+++.+++ .|..+|++++.
T Consensus        78 ~~~~~~~-~~~~~i~i~p~~afgtg~h~t-t~~-~l~~l~--~~~~~~~~VLDiGcGs-G~l~i~~~~-~g~~~v~giDi  150 (250)
T PRK00517         78 SWEDPPD-PDEINIELDPGMAFGTGTHPT-TRL-CLEALE--KLVLPGKTVLDVGCGS-GILAIAAAK-LGAKKVLAVDI  150 (250)
T ss_pred             CCcCCCC-CCeEEEEECCCCccCCCCCHH-HHH-HHHHHH--hhcCCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEEEC
Confidence            5666644 667889999988877654221 111 111111  2357899999999987 888886555 67757999999


Q ss_pred             ChhhHHHHHhc----CCceEEcCCCCChhHHHHHHHHcCCCccEEEEcccCh---HhHHHHHHHhhCCCceEEEEcCC
Q 018529          203 SSKRFEEAKKF----GVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI---DNMISAFECVHDGWGVAVLVGVP  273 (354)
Q Consensus       203 ~~~~~~~~~~l----g~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~~---~~~~~~~~~l~~~~g~~v~~g~~  273 (354)
                      ++...+.+++.    +....+.....+            ..||+|+......   ..+..+.+.|+++ |++++.+..
T Consensus       151 s~~~l~~A~~n~~~~~~~~~~~~~~~~------------~~fD~Vvani~~~~~~~l~~~~~~~Lkpg-G~lilsgi~  215 (250)
T PRK00517        151 DPQAVEAARENAELNGVELNVYLPQGD------------LKADVIVANILANPLLELAPDLARLLKPG-GRLILSGIL  215 (250)
T ss_pred             CHHHHHHHHHHHHHcCCCceEEEccCC------------CCcCEEEEcCcHHHHHHHHHHHHHhcCCC-cEEEEEECc
Confidence            99988877652    321111111110            1589998765432   3466788889997 999987654

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=98.33  E-value=1.6e-05  Score=70.57  Aligned_cols=97  Identities=19%  Similarity=0.282  Sum_probs=75.9

Q ss_pred             CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEccc
Q 018529          169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  248 (354)
Q Consensus       169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g  248 (354)
                      .+.+++|+|.|.+|..+++.++.+|+ +|++++++.++.++++++|...+ .+        +.+.+.. .++|+||++++
T Consensus       151 ~g~kvlViG~G~iG~~~a~~L~~~Ga-~V~v~~r~~~~~~~~~~~G~~~~-~~--------~~l~~~l-~~aDiVI~t~p  219 (296)
T PRK08306        151 HGSNVLVLGFGRTGMTLARTLKALGA-NVTVGARKSAHLARITEMGLSPF-HL--------SELAEEV-GKIDIIFNTIP  219 (296)
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCeee-cH--------HHHHHHh-CCCCEEEECCC
Confidence            68999999999999999999999999 99999999999888988887532 11        1122221 25899999997


Q ss_pred             ChHhHHHHHHHhhCCCceEEEEcCCCCCc
Q 018529          249 NIDNMISAFECVHDGWGVAVLVGVPSKDA  277 (354)
Q Consensus       249 ~~~~~~~~~~~l~~~~g~~v~~g~~~~~~  277 (354)
                      ..-..+..++.++++ +.++.++...++.
T Consensus       220 ~~~i~~~~l~~~~~g-~vIIDla~~pggt  247 (296)
T PRK08306        220 ALVLTKEVLSKMPPE-ALIIDLASKPGGT  247 (296)
T ss_pred             hhhhhHHHHHcCCCC-cEEEEEccCCCCc
Confidence            644556777889997 9999888766443

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=98.29  E-value=2.1e-06  Score=76.89  Aligned_cols=108  Identities=24%  Similarity=0.264  Sum_probs=79.4

Q ss_pred             cceEECCCCCCccchhhcccchhhhhhhhhhhcCC----CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhH-
Q 018529          133 GCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKP----ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRF-  207 (354)
Q Consensus       133 ~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~~~----~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~-  207 (354)
                      ...+++|+.+..+.++... +.+.+++++ +.+..    -++.+|+|+|+|.+|.++++.++..|..+|++++++.++. 
T Consensus       139 ~~a~~~~k~vr~et~i~~~-~~sv~~~Av-~~a~~~~~~l~~~~V~ViGaG~iG~~~a~~L~~~g~~~V~v~~r~~~ra~  216 (311)
T cd05213         139 QKAIKVGKRVRTETGISRG-AVSISSAAV-ELAEKIFGNLKGKKVLVIGAGEMGELAAKHLAAKGVAEITIANRTYERAE  216 (311)
T ss_pred             HHHHHHHHHHhhhcCCCCC-CcCHHHHHH-HHHHHHhCCccCCEEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHH
Confidence            3677889999888887765 666777764 33332    4789999999999999999999988877899999998865 


Q ss_pred             HHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcccChHh
Q 018529          208 EEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDN  252 (354)
Q Consensus       208 ~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~~~~  252 (354)
                      ++++++|.. +++..    ++.+.+     ..+|+||.+++.+..
T Consensus       217 ~la~~~g~~-~~~~~----~~~~~l-----~~aDvVi~at~~~~~  251 (311)
T cd05213         217 ELAKELGGN-AVPLD----ELLELL-----NEADVVISATGAPHY  251 (311)
T ss_pred             HHHHHcCCe-EEeHH----HHHHHH-----hcCCEEEECCCCCch
Confidence            677888873 33221    122222     247999999998655

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function

Probab=98.28  E-value=1.6e-05  Score=69.66  Aligned_cols=185  Identities=12%  Similarity=0.096  Sum_probs=106.7

Q ss_pred             EEEEEeCCCCCCCCCCCEEEecccCCCC-CCcccc---cCCC--CCCcccccccccceeeEEeeccceEECCCCCCccch
Q 018529           74 GVVESVGEGVSDLEVGDHVLPVFTGECG-DCRHCR---FSIN--GEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKV  147 (354)
Q Consensus        74 G~V~~vG~~~~~~~~Gd~V~~~~~~~~~-~c~~c~---~~~~--~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~a  147 (354)
                      ++|++  |.++++.+|.||.++....-. .=.+-+   .++.  ..++.+  -.-.|-+|.++..+..+.-  .....++
T Consensus        39 A~Vve--S~~~~i~vGerlyGy~P~ashl~l~p~~v~~~~f~d~s~hR~~--l~~~YN~Y~r~~~d~~y~~--~~e~~~~  112 (314)
T PF11017_consen   39 ATVVE--SRHPGIAVGERLYGYFPMASHLVLEPGKVSPGGFRDVSPHRAG--LPPIYNQYLRVSADPAYDP--EREDWQM  112 (314)
T ss_pred             EEEEe--eCCCCccCccEEEeeccccceeEEeccccCCCccccChhhhCc--CchhhhceeecCCCcccCc--chhHHHH
Confidence            45555  788899999999988643310 000000   0000  000000  0024566666665544311  1111222


Q ss_pred             hhcccchhhhhhhhhhh---cCCCCCCeEEEEcC-ChhHHHHHHHHH-HcCCcEEEEEcCChhhHHHHHhcCC-ceEEcC
Q 018529          148 CILSCGVSTGLGATLNV---AKPERGSSVAVFGL-GAVGLAAAEGAR-IAGASRIIGVDRSSKRFEEAKKFGV-TDFVNT  221 (354)
Q Consensus       148 a~l~~~~~~a~~~l~~~---~~~~~~~~vlI~G~-g~~G~~a~~~a~-~~g~~~vi~v~~~~~~~~~~~~lg~-~~v~~~  221 (354)
                      ..-+ -+.|+|-. .+-   ...-..+.|+|.+| +-+++..+..++ ..+.-++|+++ |+.+..+.+++|+ +.|+.|
T Consensus       113 LlrP-Lf~Tsfll-~d~l~~~~~~ga~~vvl~SASSKTA~glA~~L~~~~~~~~~vglT-S~~N~~Fve~lg~Yd~V~~Y  189 (314)
T PF11017_consen  113 LLRP-LFITSFLL-DDFLFDNDFFGAAQVVLSSASSKTAIGLAYCLKKQRGPPKVVGLT-SARNVAFVESLGCYDEVLTY  189 (314)
T ss_pred             HHHH-HHHHHHHH-HHHhcccccCCccEEEEeccchHHHHHHHHHhhccCCCceEEEEe-cCcchhhhhccCCceEEeeh
Confidence            2222 44555532 221   12233466777776 778888777777 45555999995 5555668999997 778877


Q ss_pred             CCCChhHHHHHHHHcCCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCC
Q 018529          222 SEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSK  275 (354)
Q Consensus       222 ~~~~~~~~~~i~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~  275 (354)
                      ++        |.++....--+++|..|+.+....+...++..--..+.+|.+..
T Consensus       190 d~--------i~~l~~~~~~v~VDfaG~~~~~~~Lh~~l~d~l~~~~~VG~th~  235 (314)
T PF11017_consen  190 DD--------IDSLDAPQPVVIVDFAGNGEVLAALHEHLGDNLVYSCLVGATHW  235 (314)
T ss_pred             hh--------hhhccCCCCEEEEECCCCHHHHHHHHHHHhhhhhEEEEEEccCc
Confidence            54        44443345678899999988888888888886455777876653

>PLN02494 adenosylhomocysteinase

Probab=98.26  E-value=1.3e-05  Score=74.26  Aligned_cols=101  Identities=21%  Similarity=0.286  Sum_probs=79.5

Q ss_pred             hhhhhhhcCC-CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHc
Q 018529          158 LGATLNVAKP-ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMT  236 (354)
Q Consensus       158 ~~~l~~~~~~-~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~  236 (354)
                      +.++.+..++ -.|++|+|+|.|.+|...++.++.+|+ +|+++++++.+...+...|+..+      +  ..+.++   
T Consensus       241 ~d~i~r~t~i~LaGKtVvViGyG~IGr~vA~~aka~Ga-~VIV~e~dp~r~~eA~~~G~~vv------~--leEal~---  308 (477)
T PLN02494        241 PDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKAAGA-RVIVTEIDPICALQALMEGYQVL------T--LEDVVS---  308 (477)
T ss_pred             HHHHHHhcCCccCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhHHHHhcCCeec------c--HHHHHh---
Confidence            4555554443 679999999999999999999999999 89999999888777777776522      1  323232   


Q ss_pred             CCCccEEEEcccChHhH-HHHHHHhhCCCceEEEEcCC
Q 018529          237 NGGVDRSVECTGNIDNM-ISAFECVHDGWGVAVLVGVP  273 (354)
Q Consensus       237 ~~~~dvv~d~~g~~~~~-~~~~~~l~~~~g~~v~~g~~  273 (354)
                        ..|++++++|....+ ...++.++++ +.++.+|..
T Consensus       309 --~ADVVI~tTGt~~vI~~e~L~~MK~G-AiLiNvGr~  343 (477)
T PLN02494        309 --EADIFVTTTGNKDIIMVDHMRKMKNN-AIVCNIGHF  343 (477)
T ss_pred             --hCCEEEECCCCccchHHHHHhcCCCC-CEEEEcCCC
Confidence              479999999986654 7899999997 999999874

>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=98.21  E-value=1e-05  Score=66.47  Aligned_cols=99  Identities=20%  Similarity=0.326  Sum_probs=76.5

Q ss_pred             hhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhh----HHHHHhcCCceE-EcCCCCChhHHHHHHHH
Q 018529          161 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKR----FEEAKKFGVTDF-VNTSEHDRPIQEVIAEM  235 (354)
Q Consensus       161 l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~----~~~~~~lg~~~v-~~~~~~~~~~~~~i~~~  235 (354)
                      |.+...++++++||=+|+|. |+.++-+|+..|  +|+.+++.++=    .+.++++|...| +...+....|       
T Consensus        64 m~~~L~~~~g~~VLEIGtGs-GY~aAvla~l~~--~V~siEr~~~L~~~A~~~L~~lg~~nV~v~~gDG~~G~-------  133 (209)
T COG2518          64 MLQLLELKPGDRVLEIGTGS-GYQAAVLARLVG--RVVSIERIEELAEQARRNLETLGYENVTVRHGDGSKGW-------  133 (209)
T ss_pred             HHHHhCCCCCCeEEEECCCc-hHHHHHHHHHhC--eEEEEEEcHHHHHHHHHHHHHcCCCceEEEECCcccCC-------
Confidence            46778999999999999874 999999999998  89999998874    444566888554 3333332222       


Q ss_pred             cCC-CccEEEEcccChHhHHHHHHHhhCCCceEEEE
Q 018529          236 TNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLV  270 (354)
Q Consensus       236 ~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~  270 (354)
                      .+. .||.|+-+.+.+..-...++.|+++ |+++.-
T Consensus       134 ~~~aPyD~I~Vtaaa~~vP~~Ll~QL~~g-Grlv~P  168 (209)
T COG2518         134 PEEAPYDRIIVTAAAPEVPEALLDQLKPG-GRLVIP  168 (209)
T ss_pred             CCCCCcCEEEEeeccCCCCHHHHHhcccC-CEEEEE
Confidence            233 8999999888877778999999997 997754

>TIGR00518 alaDH alanine dehydrogenase

Probab=98.01  E-value=6e-05  Score=69.07  Aligned_cols=99  Identities=22%  Similarity=0.176  Sum_probs=69.5

Q ss_pred             CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh-cCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcc
Q 018529          169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  247 (354)
Q Consensus       169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~-lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~  247 (354)
                      ++.+|+|+|+|.+|+.+++.++.+|+ +|++++++.++.+.+.+ ++......+.+ .    +.+.+.. ..+|+||+++
T Consensus       166 ~~~~VlViGaG~vG~~aa~~a~~lGa-~V~v~d~~~~~~~~l~~~~g~~v~~~~~~-~----~~l~~~l-~~aDvVI~a~  238 (370)
T TIGR00518       166 EPGDVTIIGGGVVGTNAAKMANGLGA-TVTILDINIDRLRQLDAEFGGRIHTRYSN-A----YEIEDAV-KRADLLIGAV  238 (370)
T ss_pred             CCceEEEEcCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHhcCceeEeccCC-H----HHHHHHH-ccCCEEEEcc
Confidence            34569999999999999999999999 89999999988877654 55432222221 1    1222222 2589999997


Q ss_pred             cC-----hH-hHHHHHHHhhCCCceEEEEcCCCC
Q 018529          248 GN-----ID-NMISAFECVHDGWGVAVLVGVPSK  275 (354)
Q Consensus       248 g~-----~~-~~~~~~~~l~~~~g~~v~~g~~~~  275 (354)
                      +.     +. ..+..++.++++ +.++.++...+
T Consensus       239 ~~~g~~~p~lit~~~l~~mk~g-~vIvDva~d~G  271 (370)
T TIGR00518       239 LIPGAKAPKLVSNSLVAQMKPG-AVIVDVAIDQG  271 (370)
T ss_pred             ccCCCCCCcCcCHHHHhcCCCC-CEEEEEecCCC
Confidence            32     22 246777889997 99999886543

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=97.94  E-value=0.00012  Score=68.10  Aligned_cols=125  Identities=19%  Similarity=0.203  Sum_probs=85.2

Q ss_pred             eEECCCCCCccchhhcccchhhhhhhhhhhcC-CCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhc
Q 018529          135 VAKINPLAPLDKVCILSCGVSTGLGATLNVAK-PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF  213 (354)
Q Consensus       135 ~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~~-~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~l  213 (354)
                      ++-+|+...-..+-...-...+.+.++.+..+ .-.|++|+|+|.|.+|...++.++.+|+ +|+++++++.+...+...
T Consensus       218 V~nv~d~~tk~~aD~~~G~~~s~~d~~~R~~~~~LaGKtVgVIG~G~IGr~vA~rL~a~Ga-~ViV~e~dp~~a~~A~~~  296 (476)
T PTZ00075        218 AINVNDSVTKSKFDNIYGCRHSLIDGIFRATDVMIAGKTVVVCGYGDVGKGCAQALRGFGA-RVVVTEIDPICALQAAME  296 (476)
T ss_pred             EEEeCCcchHHHHHHHHHHHHHHHHHHHHhcCCCcCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHhc
Confidence            45556654333222211112223344444333 4579999999999999999999999999 899998887776555556


Q ss_pred             CCceEEcCCCCChhHHHHHHHHcCCCccEEEEcccChHhHH-HHHHHhhCCCceEEEEcCCC
Q 018529          214 GVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMI-SAFECVHDGWGVAVLVGVPS  274 (354)
Q Consensus       214 g~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~~~~~~-~~~~~l~~~~g~~v~~g~~~  274 (354)
                      |+..+ +       +.+.+     ...|+|+.++|....+. ..+..|+++ +.++.+|...
T Consensus       297 G~~~~-~-------leell-----~~ADIVI~atGt~~iI~~e~~~~MKpG-AiLINvGr~d  344 (476)
T PTZ00075        297 GYQVV-T-------LEDVV-----ETADIFVTATGNKDIITLEHMRRMKNN-AIVGNIGHFD  344 (476)
T ss_pred             Cceec-c-------HHHHH-----hcCCEEEECCCcccccCHHHHhccCCC-cEEEEcCCCc
Confidence            65421 1       33322     24899999999877765 899999997 9999998763

>PRK08324 short chain dehydrogenase; Validated

Probab=97.93  E-value=8.4e-05  Score=74.03  Aligned_cols=138  Identities=22%  Similarity=0.280  Sum_probs=88.0

Q ss_pred             ccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhcCCCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEE
Q 018529          122 STFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGV  200 (354)
Q Consensus       122 g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v  200 (354)
                      -++.+|..+++..++.+ +..+.+++..-.          .......+|+++||+|+ |++|...++.+...|+ +|+++
T Consensus       385 ~~~~~~~~l~~~~~f~i-~~~~~e~a~l~~----------~~~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga-~Vvl~  452 (681)
T PRK08324        385 EAVGRYEPLSEQEAFDI-EYWSLEQAKLQR----------MPKPKPLAGKVALVTGAAGGIGKATAKRLAAEGA-CVVLA  452 (681)
T ss_pred             hhcCCccCCChhhhcce-eeehhhhhhhhc----------CCCCcCCCCCEEEEecCCCHHHHHHHHHHHHCcC-EEEEE
Confidence            36678888888777777 666666664211          00122346899999986 9999999999999999 89999


Q ss_pred             cCChhhHHHHHh-cCC--c---eEEcCCCCChhHHHHHHHHc--CCCccEEEEcccC-----------------------
Q 018529          201 DRSSKRFEEAKK-FGV--T---DFVNTSEHDRPIQEVIAEMT--NGGVDRSVECTGN-----------------------  249 (354)
Q Consensus       201 ~~~~~~~~~~~~-lg~--~---~v~~~~~~~~~~~~~i~~~~--~~~~dvv~d~~g~-----------------------  249 (354)
                      +++.++.+.+.+ ++.  .   ...|..+.+ .+.+.+.+..  .+++|++|+++|.                       
T Consensus       453 ~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~-~v~~~~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~  531 (681)
T PRK08324        453 DLDEEAAEAAAAELGGPDRALGVACDVTDEA-AVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNAT  531 (681)
T ss_pred             eCCHHHHHHHHHHHhccCcEEEEEecCCCHH-HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhH
Confidence            999887665433 432  1   122333321 2323333321  2479999999982                       


Q ss_pred             --hHhHHHHHHHhhC---CCceEEEEcCC
Q 018529          250 --IDNMISAFECVHD---GWGVAVLVGVP  273 (354)
Q Consensus       250 --~~~~~~~~~~l~~---~~g~~v~~g~~  273 (354)
                        ...++.+++.++.   + |++++++..
T Consensus       532 g~~~l~~~~~~~l~~~~~~-g~iV~vsS~  559 (681)
T PRK08324        532 GHFLVAREAVRIMKAQGLG-GSIVFIASK  559 (681)
T ss_pred             HHHHHHHHHHHHHHhcCCC-cEEEEECCc
Confidence              1223444555555   4 789988864

>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional

Probab=97.90  E-value=1.2e-05  Score=78.28  Aligned_cols=80  Identities=25%  Similarity=0.336  Sum_probs=59.7

Q ss_pred             CCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCC---------------------hhhHHHHHhcCCceEEcCCC-
Q 018529          166 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS---------------------SKRFEEAKKFGVTDFVNTSE-  223 (354)
Q Consensus       166 ~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~---------------------~~~~~~~~~lg~~~v~~~~~-  223 (354)
                      ..++|++|+|+|+|++|+++++.++..|+ +|++++..                     +++.++++++|++..++... 
T Consensus       133 ~~~~g~~V~VIGaGpaGL~aA~~l~~~G~-~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~~  211 (564)
T PRK12771        133 APDTGKRVAVIGGGPAGLSAAYHLRRMGH-AVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRVG  211 (564)
T ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEEC
Confidence            46789999999999999999999999999 78888742                     35667788899887766433 


Q ss_pred             CChhHHHHHHHHcCCCccEEEEcccChH
Q 018529          224 HDRPIQEVIAEMTNGGVDRSVECTGNID  251 (354)
Q Consensus       224 ~~~~~~~~i~~~~~~~~dvv~d~~g~~~  251 (354)
                      .+... +.+    ..++|+||+++|...
T Consensus       212 ~~~~~-~~~----~~~~D~Vi~AtG~~~  234 (564)
T PRK12771        212 EDITL-EQL----EGEFDAVFVAIGAQL  234 (564)
T ss_pred             CcCCH-HHH----HhhCCEEEEeeCCCC
Confidence            21111 111    126999999999753

>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]

Probab=97.90  E-value=0.00016  Score=58.25  Aligned_cols=104  Identities=21%  Similarity=0.348  Sum_probs=75.1

Q ss_pred             hhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH----hcCCceEEcCCCCChhHHHHHHHHcCC
Q 018529          163 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTDFVNTSEHDRPIQEVIAEMTNG  238 (354)
Q Consensus       163 ~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~----~lg~~~v~~~~~~~~~~~~~i~~~~~~  238 (354)
                      .+.++++|+.++=+|+|. |..++++|...-..+|+++++++++.++.+    +||.+.+......   ..+.+..+.  
T Consensus        28 s~L~~~~g~~l~DIGaGt-Gsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g~---Ap~~L~~~~--  101 (187)
T COG2242          28 SKLRPRPGDRLWDIGAGT-GSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEGD---APEALPDLP--  101 (187)
T ss_pred             HhhCCCCCCEEEEeCCCc-cHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEecc---chHhhcCCC--
Confidence            456889999887789864 777788885554459999999999998874    5898766544443   333343332  


Q ss_pred             CccEEEEcccC--hHhHHHHHHHhhCCCceEEEEcCC
Q 018529          239 GVDRSVECTGN--IDNMISAFECVHDGWGVAVLVGVP  273 (354)
Q Consensus       239 ~~dvv~d~~g~--~~~~~~~~~~l~~~~g~~v~~g~~  273 (354)
                      .+|.+|---|.  +..++.+|..|+++ |++|.-...
T Consensus       102 ~~daiFIGGg~~i~~ile~~~~~l~~g-grlV~nait  137 (187)
T COG2242         102 SPDAIFIGGGGNIEEILEAAWERLKPG-GRLVANAIT  137 (187)
T ss_pred             CCCEEEECCCCCHHHHHHHHHHHcCcC-CeEEEEeec
Confidence            59999976543  35788999999997 998866543

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=97.80  E-value=0.00056  Score=60.39  Aligned_cols=96  Identities=20%  Similarity=0.300  Sum_probs=70.5

Q ss_pred             CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEccc
Q 018529          169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  248 (354)
Q Consensus       169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g  248 (354)
                      .|++++|+|.|.+|.+.+..++.+|+ +|++.++++++.+.+.++|...+ .       +. .+.+.. ..+|+|+++++
T Consensus       150 ~gk~v~IiG~G~iG~avA~~L~~~G~-~V~v~~R~~~~~~~~~~~g~~~~-~-------~~-~l~~~l-~~aDiVint~P  218 (287)
T TIGR02853       150 HGSNVMVLGFGRTGMTIARTFSALGA-RVFVGARSSADLARITEMGLIPF-P-------LN-KLEEKV-AEIDIVINTIP  218 (287)
T ss_pred             CCCEEEEEcChHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeee-c-------HH-HHHHHh-ccCCEEEECCC
Confidence            47899999999999999999999999 89999999988887777775422 1       11 122221 25899999987


Q ss_pred             ChHhHHHHHHHhhCCCceEEEEcCCCCC
Q 018529          249 NIDNMISAFECVHDGWGVAVLVGVPSKD  276 (354)
Q Consensus       249 ~~~~~~~~~~~l~~~~g~~v~~g~~~~~  276 (354)
                      ..-.-...++.++++ ..++.++..+.+
T Consensus       219 ~~ii~~~~l~~~k~~-aliIDlas~Pg~  245 (287)
T TIGR02853       219 ALVLTADVLSKLPKH-AVIIDLASKPGG  245 (287)
T ss_pred             hHHhCHHHHhcCCCC-eEEEEeCcCCCC
Confidence            632234567778886 778878765533

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=97.75  E-value=0.00013  Score=56.72  Aligned_cols=74  Identities=26%  Similarity=0.368  Sum_probs=54.5

Q ss_pred             CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-HhcCCc--eEEcCCCCChhHHHHHHHHcCCCccEEE
Q 018529          168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVT--DFVNTSEHDRPIQEVIAEMTNGGVDRSV  244 (354)
Q Consensus       168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~~lg~~--~v~~~~~~~~~~~~~i~~~~~~~~dvv~  244 (354)
                      -++.+++|+|+|++|.+++..+...|+++|+.+.|+.+|.+.+ ++++..  .++.+.+    +.+.+     ..+|+||
T Consensus        10 l~~~~vlviGaGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~----~~~~~-----~~~DivI   80 (135)
T PF01488_consen   10 LKGKRVLVIGAGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLED----LEEAL-----QEADIVI   80 (135)
T ss_dssp             GTTSEEEEESSSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGG----HCHHH-----HTESEEE
T ss_pred             cCCCEEEEECCHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHH----HHHHH-----hhCCeEE
Confidence            3589999999999999999999999998899999999887765 445322  2344433    22222     1589999


Q ss_pred             EcccCh
Q 018529          245 ECTGNI  250 (354)
Q Consensus       245 d~~g~~  250 (354)
                      +|++.+
T Consensus        81 ~aT~~~   86 (135)
T PF01488_consen   81 NATPSG   86 (135)
T ss_dssp             E-SSTT
T ss_pred             EecCCC
Confidence            998874

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>TIGR00406 prmA ribosomal protein L11 methyltransferase

Probab=97.73  E-value=0.00012  Score=64.94  Aligned_cols=97  Identities=22%  Similarity=0.275  Sum_probs=64.9

Q ss_pred             CCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhc----CCce-EEcCCCCChhHHHHHHHHcCCCcc
Q 018529          167 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF----GVTD-FVNTSEHDRPIQEVIAEMTNGGVD  241 (354)
Q Consensus       167 ~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~l----g~~~-v~~~~~~~~~~~~~i~~~~~~~~d  241 (354)
                      .+++++||-+|+|. |.+++.+++ .|+.+|++++.++...+.+++.    +... +..... +      ......++||
T Consensus       157 ~~~g~~VLDvGcGs-G~lai~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~~-~------~~~~~~~~fD  227 (288)
T TIGR00406       157 DLKDKNVIDVGCGS-GILSIAALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKLI-Y------LEQPIEGKAD  227 (288)
T ss_pred             cCCCCEEEEeCCCh-hHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEec-c------cccccCCCce
Confidence            46789999999987 888877765 5766999999999888777652    2211 111111 0      1112234799


Q ss_pred             EEEEcccCh---HhHHHHHHHhhCCCceEEEEcCC
Q 018529          242 RSVECTGNI---DNMISAFECVHDGWGVAVLVGVP  273 (354)
Q Consensus       242 vv~d~~g~~---~~~~~~~~~l~~~~g~~v~~g~~  273 (354)
                      +|+......   ..+..+.+.|+++ |.+++.|..
T Consensus       228 lVvan~~~~~l~~ll~~~~~~Lkpg-G~li~sgi~  261 (288)
T TIGR00406       228 VIVANILAEVIKELYPQFSRLVKPG-GWLILSGIL  261 (288)
T ss_pred             EEEEecCHHHHHHHHHHHHHHcCCC-cEEEEEeCc
Confidence            998754332   4566778899997 999887654

Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.

>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=97.69  E-value=0.00044  Score=61.85  Aligned_cols=102  Identities=23%  Similarity=0.291  Sum_probs=73.3

Q ss_pred             hhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCC-cEEEEEcCChhhHHHHH----hcCCceEEcCCCCChhHHHHHHHHc
Q 018529          162 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAK----KFGVTDFVNTSEHDRPIQEVIAEMT  236 (354)
Q Consensus       162 ~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~-~~vi~v~~~~~~~~~~~----~lg~~~v~~~~~~~~~~~~~i~~~~  236 (354)
                      .+...++++++||.+|+| .|..++.+++..+. ..|++++.+++..+.++    ++|.+.+..... +  ..+.+... 
T Consensus        73 l~~L~i~~g~~VLDIG~G-tG~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~g-D--~~~~~~~~-  147 (322)
T PRK13943         73 MEWVGLDKGMRVLEIGGG-TGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVCG-D--GYYGVPEF-  147 (322)
T ss_pred             HHhcCCCCCCEEEEEeCC-ccHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeC-C--hhhccccc-
Confidence            455678899999999998 59999999998764 37999999998766654    467655433322 2  22222111 


Q ss_pred             CCCccEEEEcccChHhHHHHHHHhhCCCceEEEE
Q 018529          237 NGGVDRSVECTGNIDNMISAFECVHDGWGVAVLV  270 (354)
Q Consensus       237 ~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~  270 (354)
                       +.+|+|+.+.+........++.|+++ |+++..
T Consensus       148 -~~fD~Ii~~~g~~~ip~~~~~~Lkpg-G~Lvv~  179 (322)
T PRK13943        148 -APYDVIFVTVGVDEVPETWFTQLKEG-GRVIVP  179 (322)
T ss_pred             -CCccEEEECCchHHhHHHHHHhcCCC-CEEEEE
Confidence             36999999888766677888999997 987763

>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional

Probab=97.67  E-value=0.00073  Score=56.38  Aligned_cols=102  Identities=22%  Similarity=0.414  Sum_probs=71.2

Q ss_pred             hhcCCCCCCeEEEEcCChhHHHHHHHHHHcCC-cEEEEEcCChhhHHHHH----hcC-CceEEcCCCCChhHHHHHHHHc
Q 018529          163 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAK----KFG-VTDFVNTSEHDRPIQEVIAEMT  236 (354)
Q Consensus       163 ~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~-~~vi~v~~~~~~~~~~~----~lg-~~~v~~~~~~~~~~~~~i~~~~  236 (354)
                      ....+.++++||.+|+|. |.+++.+|+..+. .+|++++.+++..+.++    ++| .+.+.....+   ..+.+... 
T Consensus        34 ~~l~~~~~~~vlDlG~Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~~d---~~~~l~~~-  108 (198)
T PRK00377         34 SKLRLRKGDMILDIGCGT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIKGE---APEILFTI-  108 (198)
T ss_pred             HHcCCCCcCEEEEeCCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEEec---hhhhHhhc-
Confidence            456789999999999987 9999999987653 38999999998888664    356 3333222221   22223222 


Q ss_pred             CCCccEEEEcccC---hHhHHHHHHHhhCCCceEEEE
Q 018529          237 NGGVDRSVECTGN---IDNMISAFECVHDGWGVAVLV  270 (354)
Q Consensus       237 ~~~~dvv~d~~g~---~~~~~~~~~~l~~~~g~~v~~  270 (354)
                      .+.+|.||...+.   ...++.+.+.|+++ |++++.
T Consensus       109 ~~~~D~V~~~~~~~~~~~~l~~~~~~Lkpg-G~lv~~  144 (198)
T PRK00377        109 NEKFDRIFIGGGSEKLKEIISASWEIIKKG-GRIVID  144 (198)
T ss_pred             CCCCCEEEECCCcccHHHHHHHHHHHcCCC-cEEEEE
Confidence            2379999985543   35677888899997 998753

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.66  E-value=0.00072  Score=55.31  Aligned_cols=82  Identities=17%  Similarity=0.270  Sum_probs=61.7

Q ss_pred             CCCCeEEEEcC--ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH-hcCCc-eEEcCCCCC--hhHHHHHHHHcCCCcc
Q 018529          168 ERGSSVAVFGL--GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVT-DFVNTSEHD--RPIQEVIAEMTNGGVD  241 (354)
Q Consensus       168 ~~~~~vlI~G~--g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~-~lg~~-~v~~~~~~~--~~~~~~i~~~~~~~~d  241 (354)
                      ...+.|||+|+  |++|++.+.-....|+ .|+++.|.-++...+. ++|.. .-+|..+++  ..+...+++.+.|+.|
T Consensus         5 ~~~k~VlItgcs~GGIG~ala~ef~~~G~-~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld   83 (289)
T KOG1209|consen    5 SQPKKVLITGCSSGGIGYALAKEFARNGY-LVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLD   83 (289)
T ss_pred             cCCCeEEEeecCCcchhHHHHHHHHhCCe-EEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceE
Confidence            35678999975  9999998888888899 9999999999888765 67763 234444433  3355667777778999


Q ss_pred             EEEEcccCh
Q 018529          242 RSVECTGNI  250 (354)
Q Consensus       242 vv~d~~g~~  250 (354)
                      +.++.+|.+
T Consensus        84 ~L~NNAG~~   92 (289)
T KOG1209|consen   84 LLYNNAGQS   92 (289)
T ss_pred             EEEcCCCCC
Confidence            999987753

>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional

Probab=97.61  E-value=0.0005  Score=63.30  Aligned_cols=113  Identities=22%  Similarity=0.238  Sum_probs=77.6

Q ss_pred             cccchhhhhhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHH
Q 018529          150 LSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQ  229 (354)
Q Consensus       150 l~~~~~~a~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~  229 (354)
                      +..+....+..+.+..+++++++||-+|+| .|.++..+++..|. +|++++.+++..+.+++.....-+.....+  +.
T Consensus       148 L~~Aq~~k~~~l~~~l~l~~g~rVLDIGcG-~G~~a~~la~~~g~-~V~giDlS~~~l~~A~~~~~~l~v~~~~~D--~~  223 (383)
T PRK11705        148 LEEAQEAKLDLICRKLQLKPGMRVLDIGCG-WGGLARYAAEHYGV-SVVGVTISAEQQKLAQERCAGLPVEIRLQD--YR  223 (383)
T ss_pred             HHHHHHHHHHHHHHHhCCCCCCEEEEeCCC-ccHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhccCeEEEEECc--hh
Confidence            433444555556677889999999999986 57788889988888 999999999999998764321111111111  21


Q ss_pred             HHHHHHcCCCccEEEEc-----ccC---hHhHHHHHHHhhCCCceEEEEcC
Q 018529          230 EVIAEMTNGGVDRSVEC-----TGN---IDNMISAFECVHDGWGVAVLVGV  272 (354)
Q Consensus       230 ~~i~~~~~~~~dvv~d~-----~g~---~~~~~~~~~~l~~~~g~~v~~g~  272 (354)
                          .+ .+.+|.|+..     +|.   ...++.+.+.|+++ |++++...
T Consensus       224 ----~l-~~~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpG-G~lvl~~i  268 (383)
T PRK11705        224 ----DL-NGQFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPD-GLFLLHTI  268 (383)
T ss_pred             ----hc-CCCCCEEEEeCchhhCChHHHHHHHHHHHHHcCCC-cEEEEEEc
Confidence                11 2479988743     332   35678888999997 99887643

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=97.56  E-value=0.00048  Score=57.89  Aligned_cols=79  Identities=20%  Similarity=0.370  Sum_probs=59.3

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-HhcCC----ceEEcCCCCChhHHHHHHHHcCC--Cc
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGV----TDFVNTSEHDRPIQEVIAEMTNG--GV  240 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~~lg~----~~v~~~~~~~~~~~~~i~~~~~~--~~  240 (354)
                      +++.++|+|+ +++|.+.++.....|+ +|+.+.|.+++++.+ .+++.    ...+|..+.. +..+.+..+...  .+
T Consensus         5 ~~kv~lITGASSGiG~A~A~~l~~~G~-~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~-~~~~~i~~~~~~~g~i   82 (246)
T COG4221           5 KGKVALITGASSGIGEATARALAEAGA-KVVLAARREERLEALADEIGAGAALALALDVTDRA-AVEAAIEALPEEFGRI   82 (246)
T ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCC-eEEEEeccHHHHHHHHHhhccCceEEEeeccCCHH-HHHHHHHHHHHhhCcc
Confidence            3478899998 9999999999999999 999999999998866 45772    2345555432 344455555444  69


Q ss_pred             cEEEEcccC
Q 018529          241 DRSVECTGN  249 (354)
Q Consensus       241 dvv~d~~g~  249 (354)
                      |+.++.+|.
T Consensus        83 DiLvNNAGl   91 (246)
T COG4221          83 DILVNNAGL   91 (246)
T ss_pred             cEEEecCCC
Confidence            999998884

>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2

Probab=97.56  E-value=0.00017  Score=60.37  Aligned_cols=102  Identities=22%  Similarity=0.299  Sum_probs=68.4

Q ss_pred             hhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCc-EEEEEcCChhhHHHH----HhcCCceEE-cCCCCChhHHHHHHH
Q 018529          161 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGAS-RIIGVDRSSKRFEEA----KKFGVTDFV-NTSEHDRPIQEVIAE  234 (354)
Q Consensus       161 l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~-~vi~v~~~~~~~~~~----~~lg~~~v~-~~~~~~~~~~~~i~~  234 (354)
                      +.+...+++|++||-+|+|. |+.++-+++..|.. +|+++++.++-.+.+    ++++...+. ...+....+    . 
T Consensus        64 ~l~~L~l~pg~~VLeIGtGs-GY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gdg~~g~----~-  137 (209)
T PF01135_consen   64 MLEALDLKPGDRVLEIGTGS-GYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGDGSEGW----P-  137 (209)
T ss_dssp             HHHHTTC-TT-EEEEES-TT-SHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES-GGGTT----G-
T ss_pred             HHHHHhcCCCCEEEEecCCC-cHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcchhhcc----c-
Confidence            45677899999999999874 88899999988753 799999988755554    446765432 222211111    1 


Q ss_pred             HcCCCccEEEEcccChHhHHHHHHHhhCCCceEEEE
Q 018529          235 MTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLV  270 (354)
Q Consensus       235 ~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~  270 (354)
                       ..++||.|+-+.+.++.-...++.|+++ |+++.-
T Consensus       138 -~~apfD~I~v~~a~~~ip~~l~~qL~~g-GrLV~p  171 (209)
T PF01135_consen  138 -EEAPFDRIIVTAAVPEIPEALLEQLKPG-GRLVAP  171 (209)
T ss_dssp             -GG-SEEEEEESSBBSS--HHHHHTEEEE-EEEEEE
T ss_pred             -cCCCcCEEEEeeccchHHHHHHHhcCCC-cEEEEE
Confidence             1137999999888767778899999997 998863

1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....

>PRK06182 short chain dehydrogenase; Validated

Probab=97.45  E-value=0.0021  Score=56.51  Aligned_cols=79  Identities=20%  Similarity=0.389  Sum_probs=54.8

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceE-EcCCCCChhHHHHHHHHc--CCCccEEE
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHDRPIQEVIAEMT--NGGVDRSV  244 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v-~~~~~~~~~~~~~i~~~~--~~~~dvv~  244 (354)
                      ++++++|+|+ |.+|...++.+...|+ +|+++++++++.+.+.+.+...+ .|..+.+ .+.+.+++..  .+++|+++
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~~~-~~~~~~~~~~~~~~~id~li   79 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGY-TVYGAARRVDKMEDLASLGVHPLSLDVTDEA-SIKAAVDTIIAEEGRIDVLV   79 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhCCCeEEEeeCCCHH-HHHHHHHHHHHhcCCCCEEE
Confidence            4678999997 9999999998888899 89999999888766655554332 3433322 2333333322  23799999


Q ss_pred             EcccC
Q 018529          245 ECTGN  249 (354)
Q Consensus       245 d~~g~  249 (354)
                      +++|.
T Consensus        80 ~~ag~   84 (273)
T PRK06182         80 NNAGY   84 (273)
T ss_pred             ECCCc
Confidence            99874

>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]

Probab=97.43  E-value=0.0029  Score=54.95  Aligned_cols=109  Identities=23%  Similarity=0.307  Sum_probs=77.8

Q ss_pred             hhhhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCc-eE-EcCCCCChhHH
Q 018529          156 TGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT-DF-VNTSEHDRPIQ  229 (354)
Q Consensus       156 ~a~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~-~v-~~~~~~~~~~~  229 (354)
                      .++..+.++.+++||++||=+|||- |.+++.+|+..|+ +|++++-|++..+.+++    .|.. .+ +...+      
T Consensus        59 ~k~~~~~~kl~L~~G~~lLDiGCGW-G~l~~~aA~~y~v-~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~l~d------  130 (283)
T COG2230          59 AKLDLILEKLGLKPGMTLLDIGCGW-GGLAIYAAEEYGV-TVVGVTLSEEQLAYAEKRIAARGLEDNVEVRLQD------  130 (283)
T ss_pred             HHHHHHHHhcCCCCCCEEEEeCCCh-hHHHHHHHHHcCC-EEEEeeCCHHHHHHHHHHHHHcCCCcccEEEecc------
Confidence            3444567889999999999999976 7888899999999 99999999998887654    5654 22 11111      


Q ss_pred             HHHHHHcCCCccEEEE-----cccC---hHhHHHHHHHhhCCCceEEEEcCCCCC
Q 018529          230 EVIAEMTNGGVDRSVE-----CTGN---IDNMISAFECVHDGWGVAVLVGVPSKD  276 (354)
Q Consensus       230 ~~i~~~~~~~~dvv~d-----~~g~---~~~~~~~~~~l~~~~g~~v~~g~~~~~  276 (354)
                        .+.+. +.||-|+.     .+|.   +..+..+.+.|+++ |++.+-......
T Consensus       131 --~rd~~-e~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~-G~~llh~I~~~~  181 (283)
T COG2230         131 --YRDFE-EPFDRIVSVGMFEHVGKENYDDFFKKVYALLKPG-GRMLLHSITGPD  181 (283)
T ss_pred             --ccccc-cccceeeehhhHHHhCcccHHHHHHHHHhhcCCC-ceEEEEEecCCC
Confidence              11111 24776653     4443   46788999999998 999887766544

>PRK05693 short chain dehydrogenase; Provisional

Probab=97.43  E-value=0.0025  Score=56.02  Aligned_cols=77  Identities=21%  Similarity=0.381  Sum_probs=54.4

Q ss_pred             CeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceE-EcCCCCChhHHHHHHHHc--CCCccEEEEc
Q 018529          171 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHDRPIQEVIAEMT--NGGVDRSVEC  246 (354)
Q Consensus       171 ~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v-~~~~~~~~~~~~~i~~~~--~~~~dvv~d~  246 (354)
                      +++||+|+ |.+|...++.+...|+ +|++++++.++.+.+...+...+ .|..+.+ .+.+.+....  .+++|+++++
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~~~id~vi~~   79 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGY-EVWATARKAEDVEALAAAGFTAVQLDVNDGA-ALARLAEELEAEHGGLDVLINN   79 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeEEEeeCCCHH-HHHHHHHHHHHhcCCCCEEEEC
Confidence            47899987 9999999999988999 89999999888777666665433 3443322 2333333332  2379999999


Q ss_pred             ccC
Q 018529          247 TGN  249 (354)
Q Consensus       247 ~g~  249 (354)
                      +|.
T Consensus        80 ag~   82 (274)
T PRK05693         80 AGY   82 (274)
T ss_pred             CCC
Confidence            883

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.40  E-value=0.003  Score=54.14  Aligned_cols=103  Identities=24%  Similarity=0.365  Sum_probs=66.3

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-Hhc---CCceEE--cCCCCChhHHHHHHHHc--CCC
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKF---GVTDFV--NTSEHDRPIQEVIAEMT--NGG  239 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~~l---g~~~v~--~~~~~~~~~~~~i~~~~--~~~  239 (354)
                      +++++||+|+ |.+|..+++.+...|+ +|+.+++++++.+.+ .++   +..+.+  |..+. ..+.+.+++..  .++
T Consensus         4 ~~~~vlItGa~g~iG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~~~   81 (238)
T PRK05786          4 KGKKVAIIGVSEGLGYAVAYFALKEGA-QVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSST-ESARNVIEKAAKVLNA   81 (238)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCH-HHHHHHHHHHHHHhCC
Confidence            4689999987 9999999999999999 899999988877655 222   222222  22221 12322232221  136


Q ss_pred             ccEEEEcccChH-----------------------hHHHHHHHhhCCCceEEEEcCCC
Q 018529          240 VDRSVECTGNID-----------------------NMISAFECVHDGWGVAVLVGVPS  274 (354)
Q Consensus       240 ~dvv~d~~g~~~-----------------------~~~~~~~~l~~~~g~~v~~g~~~  274 (354)
                      +|.++.+.|...                       .++.....+..+ |++++++...
T Consensus        82 id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~ss~~  138 (238)
T PRK05786         82 IDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEG-SSIVLVSSMS  138 (238)
T ss_pred             CCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcC-CEEEEEecch
Confidence            899998887421                       134455566676 8899888653

>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=97.40  E-value=0.0019  Score=54.45  Aligned_cols=103  Identities=25%  Similarity=0.293  Sum_probs=70.0

Q ss_pred             hhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCC-cEEEEEcCChhhHHHHHh----cCCceEEcCCCCChhHHHHHHHH
Q 018529          161 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEM  235 (354)
Q Consensus       161 l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~-~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~~  235 (354)
                      +.....++++++||-+|+|. |+.+..+++..+. .+|++++.+++-.+.+++    +|...+..... +  ..+..  .
T Consensus        68 ~~~~l~~~~g~~VLdIG~Gs-G~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~g-d--~~~~~--~  141 (212)
T PRK13942         68 MCELLDLKEGMKVLEIGTGS-GYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVG-D--GTLGY--E  141 (212)
T ss_pred             HHHHcCCCCcCEEEEECCcc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEEC-C--cccCC--C
Confidence            44567789999999999874 7788888887763 299999999988776654    45433211111 1  00000  0


Q ss_pred             cCCCccEEEEcccChHhHHHHHHHhhCCCceEEEE
Q 018529          236 TNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLV  270 (354)
Q Consensus       236 ~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~  270 (354)
                      ..+.||+|+-....+......++.|+++ |+++..
T Consensus       142 ~~~~fD~I~~~~~~~~~~~~l~~~Lkpg-G~lvi~  175 (212)
T PRK13942        142 ENAPYDRIYVTAAGPDIPKPLIEQLKDG-GIMVIP  175 (212)
T ss_pred             cCCCcCEEEECCCcccchHHHHHhhCCC-cEEEEE
Confidence            1237999987665556778889999997 998764

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=97.37  E-value=0.0025  Score=58.08  Aligned_cols=97  Identities=19%  Similarity=0.233  Sum_probs=68.9

Q ss_pred             CeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcC---Cc-eEEcCCCCChhHHHHHHHHcCCCccEEEEc
Q 018529          171 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG---VT-DFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  246 (354)
Q Consensus       171 ~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg---~~-~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~  246 (354)
                      .+|||+|+|.+|..+++.+-+.|..+|++.+++.++.+.+....   .. ..+|..+.+ ++.+.++     ++|+||++
T Consensus         2 ~~ilviGaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~-al~~li~-----~~d~VIn~   75 (389)
T COG1748           2 MKILVIGAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVD-ALVALIK-----DFDLVINA   75 (389)
T ss_pred             CcEEEECCchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccChH-HHHHHHh-----cCCEEEEe
Confidence            47899999999999999988888459999999999999887664   22 234444322 2333332     35999999


Q ss_pred             ccChHhHHHHHHHhhCCCceEEEEcCCC
Q 018529          247 TGNIDNMISAFECVHDGWGVAVLVGVPS  274 (354)
Q Consensus       247 ~g~~~~~~~~~~~l~~~~g~~v~~g~~~  274 (354)
                      .+.......+-.|++.+ -.++......
T Consensus        76 ~p~~~~~~i~ka~i~~g-v~yvDts~~~  102 (389)
T COG1748          76 APPFVDLTILKACIKTG-VDYVDTSYYE  102 (389)
T ss_pred             CCchhhHHHHHHHHHhC-CCEEEcccCC
Confidence            98866666666677775 5666665543

>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4)

Probab=97.35  E-value=0.00062  Score=59.58  Aligned_cols=101  Identities=23%  Similarity=0.264  Sum_probs=63.9

Q ss_pred             hhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH----hcCCc-eE-EcCCCCChhHHHHHH
Q 018529          160 ATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVT-DF-VNTSEHDRPIQEVIA  233 (354)
Q Consensus       160 ~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~----~lg~~-~v-~~~~~~~~~~~~~i~  233 (354)
                      .+.+++++++|++||-+|+| -|.+++.+|+..|+ +|++++.+++..++++    +.|.. .+ +...+    +    +
T Consensus        53 ~~~~~~~l~~G~~vLDiGcG-wG~~~~~~a~~~g~-~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~~D----~----~  122 (273)
T PF02353_consen   53 LLCEKLGLKPGDRVLDIGCG-WGGLAIYAAERYGC-HVTGITLSEEQAEYARERIREAGLEDRVEVRLQD----Y----R  122 (273)
T ss_dssp             HHHTTTT--TT-EEEEES-T-TSHHHHHHHHHH---EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEES-----G----G
T ss_pred             HHHHHhCCCCCCEEEEeCCC-ccHHHHHHHHHcCc-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEee----c----c
Confidence            35688899999999999998 57778889998899 9999999999988875    35642 11 22221    1    1


Q ss_pred             HHcCCCccEEEE-----cccC---hHhHHHHHHHhhCCCceEEEEcC
Q 018529          234 EMTNGGVDRSVE-----CTGN---IDNMISAFECVHDGWGVAVLVGV  272 (354)
Q Consensus       234 ~~~~~~~dvv~d-----~~g~---~~~~~~~~~~l~~~~g~~v~~g~  272 (354)
                      ++. +.||.|+.     .+|.   +..+..+.+.|+|+ |++++-..
T Consensus       123 ~~~-~~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~Lkpg-G~~~lq~i  167 (273)
T PF02353_consen  123 DLP-GKFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPG-GRLVLQTI  167 (273)
T ss_dssp             G----S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETT-EEEEEEEE
T ss_pred             ccC-CCCCEEEEEechhhcChhHHHHHHHHHHHhcCCC-cEEEEEec
Confidence            111 27898865     3332   35688899999997 99875543

All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=97.35  E-value=0.0032  Score=51.65  Aligned_cols=94  Identities=22%  Similarity=0.309  Sum_probs=63.8

Q ss_pred             EEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcccC--
Q 018529          173 VAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN--  249 (354)
Q Consensus       173 vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~--  249 (354)
                      |+|+|+ |.+|...++.+...|. +|+++.|++++.+.  ..++..+ ..+-.+  . +.+.+... ++|+||.++|.  
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~-~V~~~~R~~~~~~~--~~~~~~~-~~d~~d--~-~~~~~al~-~~d~vi~~~~~~~   72 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGH-EVTALVRSPSKAED--SPGVEII-QGDLFD--P-DSVKAALK-GADAVIHAAGPPP   72 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTS-EEEEEESSGGGHHH--CTTEEEE-ESCTTC--H-HHHHHHHT-TSSEEEECCHSTT
T ss_pred             eEEECCCChHHHHHHHHHHHCCC-EEEEEecCchhccc--ccccccc-eeeehh--h-hhhhhhhh-hcchhhhhhhhhc
Confidence            789998 9999999999999997 99999999998777  4454433 333333  2 23333322 69999999984  


Q ss_pred             --hHhHHHHHHHhhCC-CceEEEEcCCC
Q 018529          250 --IDNMISAFECVHDG-WGVAVLVGVPS  274 (354)
Q Consensus       250 --~~~~~~~~~~l~~~-~g~~v~~g~~~  274 (354)
                        .......++.++.. -.++++++...
T Consensus        73 ~~~~~~~~~~~a~~~~~~~~~v~~s~~~  100 (183)
T PF13460_consen   73 KDVDAAKNIIEAAKKAGVKRVVYLSSAG  100 (183)
T ss_dssp             THHHHHHHHHHHHHHTTSSEEEEEEETT
T ss_pred             ccccccccccccccccccccceeeeccc
Confidence              23455555555443 14777776543

...

>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=97.33  E-value=0.0018  Score=54.29  Aligned_cols=101  Identities=17%  Similarity=0.204  Sum_probs=68.2

Q ss_pred             hhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcC-CcEEEEEcCChhhHHHHHh----cCCc---eEEcCCCCChhHHHHH
Q 018529          161 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKK----FGVT---DFVNTSEHDRPIQEVI  232 (354)
Q Consensus       161 l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g-~~~vi~v~~~~~~~~~~~~----lg~~---~v~~~~~~~~~~~~~i  232 (354)
                      +.+...++++++||-+|+|. |..+..+++..+ ..+|++++.+++-.+.+++    .+..   .++.. +    ..+.+
T Consensus        64 ~~~~l~~~~~~~VLDiG~Gs-G~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~-d----~~~~~  137 (205)
T PRK13944         64 MCELIEPRPGMKILEVGTGS-GYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHG-D----GKRGL  137 (205)
T ss_pred             HHHhcCCCCCCEEEEECcCc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEC-C----cccCC
Confidence            34566788999999999875 778888888764 2389999999987666543    4542   12221 1    11111


Q ss_pred             HHHcCCCccEEEEcccChHhHHHHHHHhhCCCceEEEE
Q 018529          233 AEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLV  270 (354)
Q Consensus       233 ~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~  270 (354)
                      .  ..+.||+|+-+.........+++.|+++ |++++.
T Consensus       138 ~--~~~~fD~Ii~~~~~~~~~~~l~~~L~~g-G~lvi~  172 (205)
T PRK13944        138 E--KHAPFDAIIVTAAASTIPSALVRQLKDG-GVLVIP  172 (205)
T ss_pred             c--cCCCccEEEEccCcchhhHHHHHhcCcC-cEEEEE
Confidence            1  1237999987766556667888999997 998764

>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit

Probab=97.32  E-value=0.0027  Score=48.30  Aligned_cols=103  Identities=21%  Similarity=0.345  Sum_probs=68.3

Q ss_pred             hhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCceEEcCCCCChhHHHHHHHHcC
Q 018529          162 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTN  237 (354)
Q Consensus       162 ~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~~~~  237 (354)
                      .....+.++++|+-+|+|. |..+..+++..+..+|++++.++...+.+++    ++...+..... +  ....... ..
T Consensus        12 ~~~~~~~~~~~vldlG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~-~--~~~~~~~-~~   86 (124)
T TIGR02469        12 LSKLRLRPGDVLWDIGAGS-GSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEG-D--APEALED-SL   86 (124)
T ss_pred             HHHcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEec-c--ccccChh-hc
Confidence            3445677788899999976 8889999998754599999999988777643    44432211111 1  1000111 12


Q ss_pred             CCccEEEEcccC---hHhHHHHHHHhhCCCceEEEE
Q 018529          238 GGVDRSVECTGN---IDNMISAFECVHDGWGVAVLV  270 (354)
Q Consensus       238 ~~~dvv~d~~g~---~~~~~~~~~~l~~~~g~~v~~  270 (354)
                      +.+|+|+...+.   ...++.+.+.|+++ |++++.
T Consensus        87 ~~~D~v~~~~~~~~~~~~l~~~~~~Lk~g-G~li~~  121 (124)
T TIGR02469        87 PEPDRVFIGGSGGLLQEILEAIWRRLRPG-GRIVLN  121 (124)
T ss_pred             CCCCEEEECCcchhHHHHHHHHHHHcCCC-CEEEEE
Confidence            379999976532   24688899999997 998765

This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.

>PRK12742 oxidoreductase; Provisional

Probab=97.31  E-value=0.0062  Score=52.12  Aligned_cols=77  Identities=22%  Similarity=0.282  Sum_probs=49.4

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcC-ChhhHHHH-HhcCCceE-EcCCCCChhHHHHHHHHcCCCccEEE
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR-SSKRFEEA-KKFGVTDF-VNTSEHDRPIQEVIAEMTNGGVDRSV  244 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~-~~~~~~~~-~~lg~~~v-~~~~~~~~~~~~~i~~~~~~~~dvv~  244 (354)
                      +++++||+|+ |.+|...++.+...|+ +|+.+.+ ++++.+.+ .+++...+ .|..+. ..+.+.+.+.  +++|+++
T Consensus         5 ~~k~vlItGasggIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~-~~~~~~~~~~--~~id~li   80 (237)
T PRK12742          5 TGKKVLVLGGSRGIGAAIVRRFVTDGA-NVRFTYAGSKDAAERLAQETGATAVQTDSADR-DAVIDVVRKS--GALDILV   80 (237)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCCHHHHHHHHHHhCCeEEecCCCCH-HHHHHHHHHh--CCCcEEE
Confidence            4689999987 9999999999988999 6766543 44544433 44565432 222221 2233333332  4689999


Q ss_pred             EcccC
Q 018529          245 ECTGN  249 (354)
Q Consensus       245 d~~g~  249 (354)
                      +++|.
T Consensus        81 ~~ag~   85 (237)
T PRK12742         81 VNAGI   85 (237)
T ss_pred             ECCCC
Confidence            99874

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=97.31  E-value=0.0019  Score=52.70  Aligned_cols=79  Identities=23%  Similarity=0.333  Sum_probs=58.4

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCC---ceEEcCCCCC--hhHHHHHHHHcCCCccE
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV---TDFVNTSEHD--RPIQEVIAEMTNGGVDR  242 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~---~~v~~~~~~~--~~~~~~i~~~~~~~~dv  242 (354)
                      .|.+|||+|+ +++|+..++--..+|- .||.+.|++++++.++....   ..+.|..+.+  .++.+++++..+ ..++
T Consensus         4 tgnTiLITGG~sGIGl~lak~f~elgN-~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P-~lNv   81 (245)
T COG3967           4 TGNTILITGGASGIGLALAKRFLELGN-TVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYP-NLNV   81 (245)
T ss_pred             cCcEEEEeCCcchhhHHHHHHHHHhCC-EEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCC-chhe
Confidence            4789999975 9999998888888887 99999999999998877433   2344444433  345555555432 5799


Q ss_pred             EEEcccC
Q 018529          243 SVECTGN  249 (354)
Q Consensus       243 v~d~~g~  249 (354)
                      +++++|-
T Consensus        82 liNNAGI   88 (245)
T COG3967          82 LINNAGI   88 (245)
T ss_pred             eeecccc
Confidence            9998885

>PRK05993 short chain dehydrogenase; Provisional

Probab=97.30  E-value=0.0021  Score=56.69  Aligned_cols=79  Identities=19%  Similarity=0.326  Sum_probs=55.7

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceE-EcCCCCChhHHHHHH---HHcCCCccEE
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHDRPIQEVIA---EMTNGGVDRS  243 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v-~~~~~~~~~~~~~i~---~~~~~~~dvv  243 (354)
                      .++++||+|+ |.+|...++.+...|+ +|+++++++++.+.+.+.+...+ .|..+.. ++.+.+.   +...+.+|++
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~-~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d~~-~~~~~~~~~~~~~~g~id~l   80 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGW-RVFATCRKEEDVAALEAEGLEAFQLDYAEPE-SIAALVAQVLELSGGRLDAL   80 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCceEEEccCCCHH-HHHHHHHHHHHHcCCCccEE
Confidence            4578999997 9999999988888899 89999999988887776665433 3433321 2222233   2233479999


Q ss_pred             EEcccC
Q 018529          244 VECTGN  249 (354)
Q Consensus       244 ~d~~g~  249 (354)
                      ++++|.
T Consensus        81 i~~Ag~   86 (277)
T PRK05993         81 FNNGAY   86 (277)
T ss_pred             EECCCc
Confidence            998763

>PRK14967 putative methyltransferase; Provisional

Probab=97.27  E-value=0.017  Score=49.19  Aligned_cols=98  Identities=23%  Similarity=0.170  Sum_probs=64.5

Q ss_pred             hhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCceEEcCCCCChhHHHHHHHHcCC
Q 018529          163 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTNG  238 (354)
Q Consensus       163 ~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~~~~~  238 (354)
                      ....++++++||-.|+|. |..++.+++. +..+|++++.+++..+.+++    .+....+..  .+  +.+.   +..+
T Consensus        30 ~~~~~~~~~~vLDlGcG~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~--~d--~~~~---~~~~  100 (223)
T PRK14967         30 AAEGLGPGRRVLDLCTGS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVRR--GD--WARA---VEFR  100 (223)
T ss_pred             HhcccCCCCeEEEecCCH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEE--Cc--hhhh---ccCC
Confidence            344678899999999987 8888888875 55599999999988876644    344322211  11  3222   1224


Q ss_pred             CccEEEEcccC---------------------------hHhHHHHHHHhhCCCceEEEE
Q 018529          239 GVDRSVECTGN---------------------------IDNMISAFECVHDGWGVAVLV  270 (354)
Q Consensus       239 ~~dvv~d~~g~---------------------------~~~~~~~~~~l~~~~g~~v~~  270 (354)
                      .||+|+...+.                           ...+..+.+.|+++ |+++++
T Consensus       101 ~fD~Vi~npPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~g-G~l~~~  158 (223)
T PRK14967        101 PFDVVVSNPPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPG-GSLLLV  158 (223)
T ss_pred             CeeEEEECCCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCC-cEEEEE
Confidence            79999874220                           12345677889997 998865

>TIGR00438 rrmJ cell division protein FtsJ

Probab=97.24  E-value=0.0061  Score=50.36  Aligned_cols=101  Identities=19%  Similarity=0.163  Sum_probs=62.5

Q ss_pred             hcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceE-EcCCCCChhHHHHHHHHcCC-Ccc
Q 018529          164 VAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHDRPIQEVIAEMTNG-GVD  241 (354)
Q Consensus       164 ~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v-~~~~~~~~~~~~~i~~~~~~-~~d  241 (354)
                      ...+++|++||.+|+|+-+.......+..+..+|++++.++.+    ...++..+ .+..+.  ...+.+.+.... ++|
T Consensus        27 ~~~i~~g~~VLDiG~GtG~~~~~l~~~~~~~~~v~~vDis~~~----~~~~i~~~~~d~~~~--~~~~~l~~~~~~~~~D  100 (188)
T TIGR00438        27 FKLIKPGDTVLDLGAAPGGWSQVAVEQVGGKGRVIAVDLQPMK----PIENVDFIRGDFTDE--EVLNKIRERVGDDKVD  100 (188)
T ss_pred             hcccCCCCEEEEecCCCCHHHHHHHHHhCCCceEEEEeccccc----cCCCceEEEeeCCCh--hHHHHHHHHhCCCCcc
Confidence            3457899999999998755544333333344489999998864    11233322 122221  234445554444 899


Q ss_pred             EEEEc-c----cC------------hHhHHHHHHHhhCCCceEEEEc
Q 018529          242 RSVEC-T----GN------------IDNMISAFECVHDGWGVAVLVG  271 (354)
Q Consensus       242 vv~d~-~----g~------------~~~~~~~~~~l~~~~g~~v~~g  271 (354)
                      +|+.. .    |.            ...+..+.++|+++ |++++..
T Consensus       101 ~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lvi~~  146 (188)
T TIGR00438       101 VVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPK-GNFVVKV  146 (188)
T ss_pred             EEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCC-CEEEEEE
Confidence            99952 1    21            24677889999997 9988753

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=97.19  E-value=0.0074  Score=57.86  Aligned_cols=47  Identities=23%  Similarity=0.191  Sum_probs=39.8

Q ss_pred             hhcCCCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH
Q 018529          163 NVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA  210 (354)
Q Consensus       163 ~~~~~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~  210 (354)
                      ...+.+.|+++||+|+ |.+|...++.+...|+ +|+++.++.++.+.+
T Consensus        73 ~~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~-~Vval~Rn~ekl~~l  120 (576)
T PLN03209         73 KELDTKDEDLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSAQRAESL  120 (576)
T ss_pred             cccccCCCCEEEEECCCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHH
Confidence            3456788999999997 9999999999988999 899888998876543

>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed

Probab=97.19  E-value=0.005  Score=50.68  Aligned_cols=98  Identities=16%  Similarity=0.158  Sum_probs=64.3

Q ss_pred             CCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCceEEcCCCCChhHHHHHHHHcCCCcc
Q 018529          166 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTNGGVD  241 (354)
Q Consensus       166 ~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~~~~~~~d  241 (354)
                      .++++.+||-+|+|. |..++.+++.....+|++++.+++..+.+++    .+.+.+ .....+  ..+ +..  .+.+|
T Consensus        42 ~l~~g~~VLDiGcGt-G~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~i-~~~~~d--~~~-~~~--~~~fD  114 (187)
T PRK00107         42 YLPGGERVLDVGSGA-GFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKNV-TVVHGR--AEE-FGQ--EEKFD  114 (187)
T ss_pred             hcCCCCeEEEEcCCC-CHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCCE-EEEecc--Hhh-CCC--CCCcc
Confidence            355689999999864 6667777765543499999999987776644    555432 222221  211 111  23799


Q ss_pred             EEEEccc--ChHhHHHHHHHhhCCCceEEEEc
Q 018529          242 RSVECTG--NIDNMISAFECVHDGWGVAVLVG  271 (354)
Q Consensus       242 vv~d~~g--~~~~~~~~~~~l~~~~g~~v~~g  271 (354)
                      +|+....  -+..++.+.+.|+++ |+++++-
T Consensus       115 lV~~~~~~~~~~~l~~~~~~LkpG-G~lv~~~  145 (187)
T PRK00107        115 VVTSRAVASLSDLVELCLPLLKPG-GRFLALK  145 (187)
T ss_pred             EEEEccccCHHHHHHHHHHhcCCC-eEEEEEe
Confidence            9996432  235777889999997 9988773

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.17  E-value=0.0032  Score=54.80  Aligned_cols=110  Identities=21%  Similarity=0.293  Sum_probs=69.0

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH----HhcCCce-EE----cCCCCChhHHHHHHHHc--
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-FV----NTSEHDRPIQEVIAEMT--  236 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~----~~lg~~~-v~----~~~~~~~~~~~~i~~~~--  236 (354)
                      .++.|+|+|| +++|.+.+.-.-..|+ +++.+.+..++++..    ++++... ++    |..+.+ +..+.+.+..  
T Consensus        11 ~~kvVvITGASsGIG~~lA~~la~~G~-~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~-~~~~~~~~~~~~   88 (282)
T KOG1205|consen   11 AGKVVLITGASSGIGEALAYELAKRGA-KLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEE-SVKKFVEWAIRH   88 (282)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCC-ceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHH-HHHHHHHHHHHh
Confidence            5788999998 8999988877778898 666666777776665    3444433 22    222222 2332332221  


Q ss_pred             CCCccEEEEcccCh-------------------------HhHHHHHHHhhCCC-ceEEEEcCCCCCceee
Q 018529          237 NGGVDRSVECTGNI-------------------------DNMISAFECVHDGW-GVAVLVGVPSKDAVFM  280 (354)
Q Consensus       237 ~~~~dvv~d~~g~~-------------------------~~~~~~~~~l~~~~-g~~v~~g~~~~~~~~~  280 (354)
                      -|++|+.++.+|-.                         .....++..|+... |+++.++...+....+
T Consensus        89 fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P  158 (282)
T KOG1205|consen   89 FGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLP  158 (282)
T ss_pred             cCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCC
Confidence            24899999988742                         23344566666544 8999998766443333

>PRK07326 short chain dehydrogenase; Provisional

Probab=97.14  E-value=0.0087  Score=51.21  Aligned_cols=79  Identities=22%  Similarity=0.344  Sum_probs=51.0

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-HhcCC---ceEE--cCCCCChhHHHHHHHHcC--CC
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGV---TDFV--NTSEHDRPIQEVIAEMTN--GG  239 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~~lg~---~~v~--~~~~~~~~~~~~i~~~~~--~~  239 (354)
                      ++.+++|+|+ |.+|...++.+...|+ +|+++++++++.+.+ +++..   -..+  +..+. ..+.+.+++...  ++
T Consensus         5 ~~~~ilItGatg~iG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~   82 (237)
T PRK07326          5 KGKVALITGGSKGIGFAIAEALLAEGY-KVAITARDQKELEEAAAELNNKGNVLGLAADVRDE-ADVQRAVDAIVAAFGG   82 (237)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCH-HHHHHHHHHHHHHcCC
Confidence            4688999987 9999998888888899 799998888766544 33321   1122  22221 223333433321  37


Q ss_pred             ccEEEEcccC
Q 018529          240 VDRSVECTGN  249 (354)
Q Consensus       240 ~dvv~d~~g~  249 (354)
                      +|++|++.|.
T Consensus        83 ~d~vi~~ag~   92 (237)
T PRK07326         83 LDVLIANAGV   92 (237)
T ss_pred             CCEEEECCCC
Confidence            8999998764

>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A

Probab=97.13  E-value=0.0018  Score=48.35  Aligned_cols=94  Identities=24%  Similarity=0.264  Sum_probs=62.5

Q ss_pred             CCCeEEEEcCChhHHHHHHHHHH-cCCcEEEEEcCChhhHHHHHhc----CC-ceEEcCCCCChhHHHHHHHHcCCCccE
Q 018529          169 RGSSVAVFGLGAVGLAAAEGARI-AGASRIIGVDRSSKRFEEAKKF----GV-TDFVNTSEHDRPIQEVIAEMTNGGVDR  242 (354)
Q Consensus       169 ~~~~vlI~G~g~~G~~a~~~a~~-~g~~~vi~v~~~~~~~~~~~~l----g~-~~v~~~~~~~~~~~~~i~~~~~~~~dv  242 (354)
                      |+++||-+|+|. |..++.+++. .+. +|++++.+++..+.+++.    +. +++.... .+  + ... ....++||+
T Consensus         1 p~~~vLDlGcG~-G~~~~~l~~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~-~d--~-~~~-~~~~~~~D~   73 (112)
T PF12847_consen    1 PGGRVLDLGCGT-GRLSIALARLFPGA-RVVGVDISPEMLEIARERAAEEGLSDRITFVQ-GD--A-EFD-PDFLEPFDL   73 (112)
T ss_dssp             TTCEEEEETTTT-SHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHHHHHTTTTTTEEEEE-SC--C-HGG-TTTSSCEEE
T ss_pred             CCCEEEEEcCcC-CHHHHHHHhcCCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEE-Cc--c-ccC-cccCCCCCE
Confidence            688999999875 8888888884 566 899999999988887652    22 2222111 11  2 101 111237999


Q ss_pred             EEEcc-cC---h------HhHHHHHHHhhCCCceEEEE
Q 018529          243 SVECT-GN---I------DNMISAFECVHDGWGVAVLV  270 (354)
Q Consensus       243 v~d~~-g~---~------~~~~~~~~~l~~~~g~~v~~  270 (354)
                      |+... ..   .      ..++.+.+.|+++ |++++-
T Consensus        74 v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pg-G~lvi~  110 (112)
T PF12847_consen   74 VICSGFTLHFLLPLDERRRVLERIRRLLKPG-GRLVIN  110 (112)
T ss_dssp             EEECSGSGGGCCHHHHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             EEECCCccccccchhHHHHHHHHHHHhcCCC-cEEEEE
Confidence            99876 21   1      2378889999997 988753

...

>PRK00536 speE spermidine synthase; Provisional

Probab=97.10  E-value=0.0019  Score=55.87  Aligned_cols=102  Identities=10%  Similarity=-0.041  Sum_probs=68.0

Q ss_pred             CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEE-Ec
Q 018529          168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSV-EC  246 (354)
Q Consensus       168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~-d~  246 (354)
                      ...++|||+|+|- |.++-.++|+-.  +|+.++.+++-.+.++++-...--..++..-.+...+++...+.+|+|| |+
T Consensus        71 ~~pk~VLIiGGGD-Gg~~REvLkh~~--~v~mVeID~~Vv~~~k~~lP~~~~~~~DpRv~l~~~~~~~~~~~fDVIIvDs  147 (262)
T PRK00536         71 KELKEVLIVDGFD-LELAHQLFKYDT--HVDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDIKKYDLIICLQ  147 (262)
T ss_pred             CCCCeEEEEcCCc-hHHHHHHHCcCC--eeEEEECCHHHHHHHHHHCHHHHHhhcCCCEEEeehhhhccCCcCCEEEEcC
Confidence            4458999998765 556778888753  9999999999999988832110001112111122223333334799986 66


Q ss_pred             ccChHhHHHHHHHhhCCCceEEEEcCC
Q 018529          247 TGNIDNMISAFECVHDGWGVAVLVGVP  273 (354)
Q Consensus       247 ~g~~~~~~~~~~~l~~~~g~~v~~g~~  273 (354)
                      .-.++..+.+.++|+++ |.++.-+..
T Consensus       148 ~~~~~fy~~~~~~L~~~-Gi~v~Qs~s  173 (262)
T PRK00536        148 EPDIHKIDGLKRMLKED-GVFISVAKH  173 (262)
T ss_pred             CCChHHHHHHHHhcCCC-cEEEECCCC
Confidence            77778889999999998 998877543

>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase

Probab=97.09  E-value=0.0056  Score=51.80  Aligned_cols=103  Identities=19%  Similarity=0.268  Sum_probs=68.2

Q ss_pred             hhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCC-cEEEEEcCChhhHHHHHh----cCCceEEcCCCCChhHHHHHHHH
Q 018529          161 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEM  235 (354)
Q Consensus       161 l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~-~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~~  235 (354)
                      +.+...++++++||-+|+|. |..++.+++..+. .+|++++.+++..+.+++    +|.+.+..... +  ..+...  
T Consensus        69 ~~~~l~~~~~~~VLDiG~Gs-G~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~~-d--~~~~~~--  142 (215)
T TIGR00080        69 MTELLELKPGMKVLEIGTGS-GYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIVG-D--GTQGWE--  142 (215)
T ss_pred             HHHHhCCCCcCEEEEECCCc-cHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEEC-C--cccCCc--
Confidence            34566789999999999874 7777788887653 269999999887776643    45533221111 1  111110  


Q ss_pred             cCCCccEEEEcccChHhHHHHHHHhhCCCceEEEE
Q 018529          236 TNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLV  270 (354)
Q Consensus       236 ~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~  270 (354)
                      ..+.||+|+-....+.......+.|+++ |++++.
T Consensus       143 ~~~~fD~Ii~~~~~~~~~~~~~~~L~~g-G~lv~~  176 (215)
T TIGR00080       143 PLAPYDRIYVTAAGPKIPEALIDQLKEG-GILVMP  176 (215)
T ss_pred             ccCCCCEEEEcCCcccccHHHHHhcCcC-cEEEEE
Confidence            1137999886655556677888999997 998764

Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=97.09  E-value=0.0036  Score=51.20  Aligned_cols=92  Identities=30%  Similarity=0.371  Sum_probs=65.0

Q ss_pred             CCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEc
Q 018529          167 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  246 (354)
Q Consensus       167 ~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~  246 (354)
                      --.|.+|.|+|.|.+|...++.++.+|. +|++.+++....+.....+...    .+    +.+.+++     .|+|+.+
T Consensus        33 ~l~g~tvgIiG~G~IG~~vA~~l~~fG~-~V~~~d~~~~~~~~~~~~~~~~----~~----l~ell~~-----aDiv~~~   98 (178)
T PF02826_consen   33 ELRGKTVGIIGYGRIGRAVARRLKAFGM-RVIGYDRSPKPEEGADEFGVEY----VS----LDELLAQ-----ADIVSLH   98 (178)
T ss_dssp             -STTSEEEEESTSHHHHHHHHHHHHTT--EEEEEESSCHHHHHHHHTTEEE----SS----HHHHHHH------SEEEE-
T ss_pred             ccCCCEEEEEEEcCCcCeEeeeeecCCc-eeEEecccCChhhhccccccee----ee----hhhhcch-----hhhhhhh
Confidence            3468999999999999999999999999 9999999888777555555421    11    5444444     6999988


Q ss_pred             ccChH-----hHHHHHHHhhCCCceEEEEcCC
Q 018529          247 TGNID-----NMISAFECVHDGWGVAVLVGVP  273 (354)
Q Consensus       247 ~g~~~-----~~~~~~~~l~~~~g~~v~~g~~  273 (354)
                      .+..+     .-...++.++++ ..+|.++..
T Consensus        99 ~plt~~T~~li~~~~l~~mk~g-a~lvN~aRG  129 (178)
T PF02826_consen   99 LPLTPETRGLINAEFLAKMKPG-AVLVNVARG  129 (178)
T ss_dssp             SSSSTTTTTSBSHHHHHTSTTT-EEEEESSSG
T ss_pred             hccccccceeeeeeeeeccccc-eEEEeccch
Confidence            76322     234677888886 777777543

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PRK12828 short chain dehydrogenase; Provisional

Probab=97.08  E-value=0.011  Score=50.54  Aligned_cols=79  Identities=22%  Similarity=0.303  Sum_probs=49.7

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHH----HHhcCCceE-EcCCCCChhHHHHHHHHc--CCCc
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEE----AKKFGVTDF-VNTSEHDRPIQEVIAEMT--NGGV  240 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~----~~~lg~~~v-~~~~~~~~~~~~~i~~~~--~~~~  240 (354)
                      +++++||+|+ |.+|...++.+...|+ +|+.++++.++.+.    +...+...+ .|..+. .++.+.+++..  .+++
T Consensus         6 ~~k~vlItGatg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~~   83 (239)
T PRK12828          6 QGKVVAITGGFGGLGRATAAWLAARGA-RVALIGRGAAPLSQTLPGVPADALRIGGIDLVDP-QAARRAVDEVNRQFGRL   83 (239)
T ss_pred             CCCEEEEECCCCcHhHHHHHHHHHCCC-eEEEEeCChHhHHHHHHHHhhcCceEEEeecCCH-HHHHHHHHHHHHHhCCc
Confidence            3789999987 9999999998888899 89999887765332    222333222 222221 12222222221  1378


Q ss_pred             cEEEEcccC
Q 018529          241 DRSVECTGN  249 (354)
Q Consensus       241 dvv~d~~g~  249 (354)
                      |+|+.++|.
T Consensus        84 d~vi~~ag~   92 (239)
T PRK12828         84 DALVNIAGA   92 (239)
T ss_pred             CEEEECCcc
Confidence            999998764

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=97.06  E-value=0.0066  Score=48.12  Aligned_cols=93  Identities=28%  Similarity=0.300  Sum_probs=61.8

Q ss_pred             CCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEE
Q 018529          166 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVE  245 (354)
Q Consensus       166 ~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d  245 (354)
                      ..-.|++++|.|-|.+|.-.++.++.+|+ +|++++.++-+.-.+..-|... ..       +.+.+     ...|+++.
T Consensus        19 ~~l~Gk~vvV~GYG~vG~g~A~~lr~~Ga-~V~V~e~DPi~alqA~~dGf~v-~~-------~~~a~-----~~adi~vt   84 (162)
T PF00670_consen   19 LMLAGKRVVVIGYGKVGKGIARALRGLGA-RVTVTEIDPIRALQAAMDGFEV-MT-------LEEAL-----RDADIFVT   84 (162)
T ss_dssp             S--TTSEEEEE--SHHHHHHHHHHHHTT--EEEEE-SSHHHHHHHHHTT-EE-E--------HHHHT-----TT-SEEEE
T ss_pred             eeeCCCEEEEeCCCcccHHHHHHHhhCCC-EEEEEECChHHHHHhhhcCcEe-cC-------HHHHH-----hhCCEEEE
Confidence            35678999999999999999999999999 9999999998777776667642 21       32222     24799999


Q ss_pred             cccChHh-HHHHHHHhhCCCceEEEEcCC
Q 018529          246 CTGNIDN-MISAFECVHDGWGVAVLVGVP  273 (354)
Q Consensus       246 ~~g~~~~-~~~~~~~l~~~~g~~v~~g~~  273 (354)
                      ++|..+. -..-++.|+++ ..+..+|..
T Consensus        85 aTG~~~vi~~e~~~~mkdg-ail~n~Gh~  112 (162)
T PF00670_consen   85 ATGNKDVITGEHFRQMKDG-AILANAGHF  112 (162)
T ss_dssp             -SSSSSSB-HHHHHHS-TT-EEEEESSSS
T ss_pred             CCCCccccCHHHHHHhcCC-eEEeccCcC
Confidence            9998664 45778889886 555555543

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>PRK08017 oxidoreductase; Provisional

Probab=97.01  E-value=0.0059  Score=52.94  Aligned_cols=78  Identities=18%  Similarity=0.304  Sum_probs=55.1

Q ss_pred             CeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceE-EcCCCCC--hhHHHHHHHHcCCCccEEEEc
Q 018529          171 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHD--RPIQEVIAEMTNGGVDRSVEC  246 (354)
Q Consensus       171 ~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v-~~~~~~~--~~~~~~i~~~~~~~~dvv~d~  246 (354)
                      +++||+|+ |.+|...++.+...|+ +|++++++.++.+.+++.++..+ .|..+.+  .++.+.+.+...+.+|.++.+
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~   81 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGY-RVLAACRKPDDVARMNSLGFTGILLDLDDPESVERAADEVIALTDNRLYGLFNN   81 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHhHHHHhCCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEEC
Confidence            57999998 9999999999999999 89999999998888777776443 3333321  112333333333478888888


Q ss_pred             ccC
Q 018529          247 TGN  249 (354)
Q Consensus       247 ~g~  249 (354)
                      .|.
T Consensus        82 ag~   84 (256)
T PRK08017         82 AGF   84 (256)
T ss_pred             CCC
Confidence            763

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=97.01  E-value=0.0033  Score=58.39  Aligned_cols=76  Identities=11%  Similarity=0.154  Sum_probs=54.7

Q ss_pred             CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-HhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEc
Q 018529          168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  246 (354)
Q Consensus       168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~  246 (354)
                      -.+.++||+|+|.+|.+++..+...|+..++++.|+.++.+.+ .+++...++.+        +.+.+.. ..+|+||+|
T Consensus       179 l~~kkvlviGaG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~--------~~l~~~l-~~aDiVI~a  249 (414)
T PRK13940        179 ISSKNVLIIGAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYL--------SELPQLI-KKADIIIAA  249 (414)
T ss_pred             ccCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecH--------HHHHHHh-ccCCEEEEC
Confidence            4678999999999999999999999987899999998775544 45652223322        1222211 248999999


Q ss_pred             ccChHh
Q 018529          247 TGNIDN  252 (354)
Q Consensus       247 ~g~~~~  252 (354)
                      ++.+..
T Consensus       250 T~a~~~  255 (414)
T PRK13940        250 VNVLEY  255 (414)
T ss_pred             cCCCCe
Confidence            998654

>COG4122 Predicted O-methyltransferase [General function prediction only]

Probab=96.98  E-value=0.013  Score=49.17  Aligned_cols=108  Identities=20%  Similarity=0.247  Sum_probs=76.7

Q ss_pred             hhcCCCCCCeEEEEcCChhHHHHHHHHHHcC-CcEEEEEcCChhhHHHHHh----cCCce-EEcCCCCChhHHHHHHHHc
Q 018529          163 NVAKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKK----FGVTD-FVNTSEHDRPIQEVIAEMT  236 (354)
Q Consensus       163 ~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g-~~~vi~v~~~~~~~~~~~~----lg~~~-v~~~~~~~~~~~~~i~~~~  236 (354)
                      ..++.+..+++|=+|.+ +|+.++.+|..+. -.+++.+++++++.+.+++    .|.+. +......+  ..+.+.+..
T Consensus        53 ~L~~~~~~k~iLEiGT~-~GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~~gd--al~~l~~~~  129 (219)
T COG4122          53 LLARLSGPKRILEIGTA-IGYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLLGGD--ALDVLSRLL  129 (219)
T ss_pred             HHHHhcCCceEEEeecc-cCHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEecCc--HHHHHHhcc
Confidence            34566677888878764 5899999999886 3389999999999888765    57654 22222123  666666644


Q ss_pred             CCCccEEE-Ecc--cChHhHHHHHHHhhCCCceEEEEcCCC
Q 018529          237 NGGVDRSV-ECT--GNIDNMISAFECVHDGWGVAVLVGVPS  274 (354)
Q Consensus       237 ~~~~dvv~-d~~--g~~~~~~~~~~~l~~~~g~~v~~g~~~  274 (354)
                      .+.||+|| |+.  -.+..++.+++.|+++ |.++.-....
T Consensus       130 ~~~fDliFIDadK~~yp~~le~~~~lLr~G-Gliv~DNvl~  169 (219)
T COG4122         130 DGSFDLVFIDADKADYPEYLERALPLLRPG-GLIVADNVLF  169 (219)
T ss_pred             CCCccEEEEeCChhhCHHHHHHHHHHhCCC-cEEEEeeccc
Confidence            56899997 443  2457899999999996 8877655443

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=96.98  E-value=0.037  Score=46.29  Aligned_cols=115  Identities=19%  Similarity=0.105  Sum_probs=68.9

Q ss_pred             CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChh-hHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcc
Q 018529          169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK-RFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  247 (354)
Q Consensus       169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~-~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~  247 (354)
                      .|.+|||+|+|.+|..-+..+...|+ .|++++.+.. ..+.+.+.|- ..+...+...   +   .+  .++++||-++
T Consensus         8 ~gk~vlVvGgG~va~rk~~~Ll~~ga-~VtVvsp~~~~~l~~l~~~~~-i~~~~~~~~~---~---dl--~~~~lVi~at   77 (205)
T TIGR01470         8 EGRAVLVVGGGDVALRKARLLLKAGA-QLRVIAEELESELTLLAEQGG-ITWLARCFDA---D---IL--EGAFLVIAAT   77 (205)
T ss_pred             CCCeEEEECcCHHHHHHHHHHHHCCC-EEEEEcCCCCHHHHHHHHcCC-EEEEeCCCCH---H---Hh--CCcEEEEECC
Confidence            46799999999999999999999999 8888865432 2223333342 1121222211   1   11  3689999999


Q ss_pred             cChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhhc-cccEEEEE
Q 018529          248 GNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGT  295 (354)
Q Consensus       248 g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g~  295 (354)
                      +.++.-.......+.. |..|..........+.++.. +. ..+++.-+
T Consensus        78 ~d~~ln~~i~~~a~~~-~ilvn~~d~~e~~~f~~pa~-~~~g~l~iais  124 (205)
T TIGR01470        78 DDEELNRRVAHAARAR-GVPVNVVDDPELCSFIFPSI-VDRSPVVVAIS  124 (205)
T ss_pred             CCHHHHHHHHHHHHHc-CCEEEECCCcccCeEEEeeE-EEcCCEEEEEE
Confidence            9865655666666665 77776654433333333222 32 34555433

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=96.93  E-value=0.0098  Score=51.37  Aligned_cols=80  Identities=25%  Similarity=0.377  Sum_probs=55.6

Q ss_pred             CCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh-----cCCce-E--EcCCCCChhHHHHHH-HHc
Q 018529          167 PERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-----FGVTD-F--VNTSEHDRPIQEVIA-EMT  236 (354)
Q Consensus       167 ~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~-----lg~~~-v--~~~~~~~~~~~~~i~-~~~  236 (354)
                      ...+.++||+|| +++|...+..+-..|. +++.+.|+++|++.+.+     .|... +  +|..+.+  -.+.+. ++.
T Consensus         3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~-~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~--~~~~l~~~l~   79 (265)
T COG0300           3 PMKGKTALITGASSGIGAELAKQLARRGY-NLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPE--ALERLEDELK   79 (265)
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChh--HHHHHHHHHH
Confidence            356789999998 9999998888888899 99999999999887643     33322 2  2333332  222332 222


Q ss_pred             C-C-CccEEEEcccC
Q 018529          237 N-G-GVDRSVECTGN  249 (354)
Q Consensus       237 ~-~-~~dvv~d~~g~  249 (354)
                      . + .+|+.++++|-
T Consensus        80 ~~~~~IdvLVNNAG~   94 (265)
T COG0300          80 ERGGPIDVLVNNAGF   94 (265)
T ss_pred             hcCCcccEEEECCCc
Confidence            2 2 79999999884

>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1

Probab=96.92  E-value=0.0031  Score=51.05  Aligned_cols=101  Identities=22%  Similarity=0.223  Sum_probs=63.8

Q ss_pred             CCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEc-CCCC--------------ChhHHHHHHH
Q 018529          170 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN-TSEH--------------DRPIQEVIAE  234 (354)
Q Consensus       170 ~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~-~~~~--------------~~~~~~~i~~  234 (354)
                      .-+|+|+|+|.+|..|+.+++.+|+ +|+..+...++.+..+.++...+.. +.+.              .......+.+
T Consensus        20 p~~vvv~G~G~vg~gA~~~~~~lGa-~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~   98 (168)
T PF01262_consen   20 PAKVVVTGAGRVGQGAAEIAKGLGA-EVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFAE   98 (168)
T ss_dssp             T-EEEEESTSHHHHHHHHHHHHTT--EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHHH
T ss_pred             CeEEEEECCCHHHHHHHHHHhHCCC-EEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHHHH
Confidence            3789999999999999999999999 8999999999998888887754433 1111              0011122222


Q ss_pred             HcCCCccEEEEccc-----ChH-hHHHHHHHhhCCCceEEEEcCC
Q 018529          235 MTNGGVDRSVECTG-----NID-NMISAFECVHDGWGVAVLVGVP  273 (354)
Q Consensus       235 ~~~~~~dvv~d~~g-----~~~-~~~~~~~~l~~~~g~~v~~g~~  273 (354)
                      ... .+|+++.+.-     .|. ..+..++.|+++ ..++.+...
T Consensus        99 ~i~-~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~g-svIvDis~D  141 (168)
T PF01262_consen   99 FIA-PADIVIGNGLYWGKRAPRLVTEEMVKSMKPG-SVIVDISCD  141 (168)
T ss_dssp             HHH-H-SEEEEHHHBTTSS---SBEHHHHHTSSTT-EEEEETTGG
T ss_pred             HHh-hCcEEeeecccCCCCCCEEEEhHHhhccCCC-ceEEEEEec
Confidence            211 3688886431     111 345677778885 667766543

4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....

>PRK04148 hypothetical protein; Provisional

Probab=96.92  E-value=0.0066  Score=46.59  Aligned_cols=93  Identities=18%  Similarity=0.178  Sum_probs=65.7

Q ss_pred             CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCC-CChhHHHHHHHHcCCCccEEEEc
Q 018529          168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE-HDRPIQEVIAEMTNGGVDRSVEC  246 (354)
Q Consensus       168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~-~~~~~~~~i~~~~~~~~dvv~d~  246 (354)
                      .++.+++++|+| .|...+..+...|. .|+++|.+++..+.+++.+...+.+.-- .+.++        .+++|+++..
T Consensus        15 ~~~~kileIG~G-fG~~vA~~L~~~G~-~ViaIDi~~~aV~~a~~~~~~~v~dDlf~p~~~~--------y~~a~liysi   84 (134)
T PRK04148         15 GKNKKIVELGIG-FYFKVAKKLKESGF-DVIVIDINEKAVEKAKKLGLNAFVDDLFNPNLEI--------YKNAKLIYSI   84 (134)
T ss_pred             ccCCEEEEEEec-CCHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhCCeEEECcCCCCCHHH--------HhcCCEEEEe
Confidence            456789999999 88755555557898 9999999999999999988765543222 12111        1369999998


Q ss_pred             ccChHhHHHHHHHhhCCCceEEEE
Q 018529          247 TGNIDNMISAFECVHDGWGVAVLV  270 (354)
Q Consensus       247 ~g~~~~~~~~~~~l~~~~g~~v~~  270 (354)
                      =..+++...+.+..+.-+.-+++.
T Consensus        85 rpp~el~~~~~~la~~~~~~~~i~  108 (134)
T PRK04148         85 RPPRDLQPFILELAKKINVPLIIK  108 (134)
T ss_pred             CCCHHHHHHHHHHHHHcCCCEEEE
Confidence            888788887777776642334433

>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]

Probab=96.91  E-value=0.0052  Score=53.39  Aligned_cols=98  Identities=20%  Similarity=0.147  Sum_probs=71.5

Q ss_pred             CCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcccC
Q 018529          170 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN  249 (354)
Q Consensus       170 ~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~  249 (354)
                      ..+|.|+|+|.+|.-++.+|..+|+ .|+..+.|.+|++.+..+...++....+....+.+.++     +.|++|.++=.
T Consensus       168 ~~kv~iiGGGvvgtnaAkiA~glgA-~Vtild~n~~rl~~ldd~f~~rv~~~~st~~~iee~v~-----~aDlvIgaVLI  241 (371)
T COG0686         168 PAKVVVLGGGVVGTNAAKIAIGLGA-DVTILDLNIDRLRQLDDLFGGRVHTLYSTPSNIEEAVK-----KADLVIGAVLI  241 (371)
T ss_pred             CccEEEECCccccchHHHHHhccCC-eeEEEecCHHHHhhhhHhhCceeEEEEcCHHHHHHHhh-----hccEEEEEEEe
Confidence            3467778999999999999999999 99999999999999987554444333332222444433     47999886422


Q ss_pred             -----hH-hHHHHHHHhhCCCceEEEEcCCC
Q 018529          250 -----ID-NMISAFECVHDGWGVAVLVGVPS  274 (354)
Q Consensus       250 -----~~-~~~~~~~~l~~~~g~~v~~g~~~  274 (354)
                           |. ..+..++.|+++ +.++.+....
T Consensus       242 pgakaPkLvt~e~vk~MkpG-sVivDVAiDq  271 (371)
T COG0686         242 PGAKAPKLVTREMVKQMKPG-SVIVDVAIDQ  271 (371)
T ss_pred             cCCCCceehhHHHHHhcCCC-cEEEEEEEcC
Confidence                 11 466789999997 9998887654

>PRK07060 short chain dehydrogenase; Provisional

Probab=96.90  E-value=0.01  Score=51.01  Aligned_cols=77  Identities=26%  Similarity=0.470  Sum_probs=52.4

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH-hcCCceE-EcCCCCChhHHHHHHHHcCCCccEEEE
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTDF-VNTSEHDRPIQEVIAEMTNGGVDRSVE  245 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~-~lg~~~v-~~~~~~~~~~~~~i~~~~~~~~dvv~d  245 (354)
                      ++.+++|+|+ |.+|...++.+...|+ +|+.++++.++.+.+. +++...+ .|..+. ..+.+.+..  .+++|++|+
T Consensus         8 ~~~~~lItGa~g~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~-~~v~~~~~~--~~~~d~vi~   83 (245)
T PRK07060          8 SGKSVLVTGASSGIGRACAVALAQRGA-RVVAAARNAAALDRLAGETGCEPLRLDVGDD-AAIRAALAA--AGAFDGLVN   83 (245)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeEEEecCCCH-HHHHHHHHH--hCCCCEEEE
Confidence            4679999997 9999999999999999 8999989887765553 3454322 233321 112222222  237899999


Q ss_pred             cccC
Q 018529          246 CTGN  249 (354)
Q Consensus       246 ~~g~  249 (354)
                      ++|.
T Consensus        84 ~ag~   87 (245)
T PRK07060         84 CAGI   87 (245)
T ss_pred             CCCC
Confidence            9874

>PRK06139 short chain dehydrogenase; Provisional

Probab=96.87  E-value=0.0059  Score=55.30  Aligned_cols=79  Identities=23%  Similarity=0.413  Sum_probs=53.5

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH----HhcCCceE---EcCCCCC--hhHHHHHHHHcCC
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTDF---VNTSEHD--RPIQEVIAEMTNG  238 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~----~~lg~~~v---~~~~~~~--~~~~~~i~~~~~~  238 (354)
                      +++++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+    ++.|....   .|..+.+  ..+.+.+.+. .+
T Consensus         6 ~~k~vlITGAs~GIG~aia~~la~~G~-~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~-~g   83 (330)
T PRK06139          6 HGAVVVITGASSGIGQATAEAFARRGA-RLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASF-GG   83 (330)
T ss_pred             CCCEEEEcCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHh-cC
Confidence            4689999997 9999999999999999 899999998876543    33555432   2333321  1122222222 24


Q ss_pred             CccEEEEcccC
Q 018529          239 GVDRSVECTGN  249 (354)
Q Consensus       239 ~~dvv~d~~g~  249 (354)
                      ++|++|+++|.
T Consensus        84 ~iD~lVnnAG~   94 (330)
T PRK06139         84 RIDVWVNNVGV   94 (330)
T ss_pred             CCCEEEECCCc
Confidence            79999999874

>PRK08177 short chain dehydrogenase; Provisional

Probab=96.87  E-value=0.0091  Score=50.76  Aligned_cols=77  Identities=9%  Similarity=0.181  Sum_probs=51.9

Q ss_pred             CeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceE--EcCCCCChhHHHHHHHHcCCCccEEEEcc
Q 018529          171 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF--VNTSEHDRPIQEVIAEMTNGGVDRSVECT  247 (354)
Q Consensus       171 ~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v--~~~~~~~~~~~~~i~~~~~~~~dvv~d~~  247 (354)
                      ++++|+|+ |.+|...+..+...|+ +|+++++++++.+.+++++-...  .|..+. ..+.+.++.+..+++|++|.++
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d~-~~~~~~~~~~~~~~id~vi~~a   79 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGW-QVTATVRGPQQDTALQALPGVHIEKLDMNDP-ASLDQLLQRLQGQRFDLLFVNA   79 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCC-EEEEEeCCCcchHHHHhccccceEEcCCCCH-HHHHHHHHHhhcCCCCEEEEcC
Confidence            46899987 9999998888888899 89999998877766655432222  232221 2233334444334799999987


Q ss_pred             cC
Q 018529          248 GN  249 (354)
Q Consensus       248 g~  249 (354)
                      |.
T Consensus        80 g~   81 (225)
T PRK08177         80 GI   81 (225)
T ss_pred             cc
Confidence            64

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=96.86  E-value=0.0078  Score=44.33  Aligned_cols=92  Identities=22%  Similarity=0.271  Sum_probs=59.9

Q ss_pred             CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEccc
Q 018529          169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  248 (354)
Q Consensus       169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g  248 (354)
                      .|.+|||+|+|.+|..-++.+...|+ +|++++...   +..+  +.-... ..+    +.+   .+  .++++||.+++
T Consensus         6 ~~~~vlVvGgG~va~~k~~~Ll~~gA-~v~vis~~~---~~~~--~~i~~~-~~~----~~~---~l--~~~~lV~~at~   69 (103)
T PF13241_consen    6 KGKRVLVVGGGPVAARKARLLLEAGA-KVTVISPEI---EFSE--GLIQLI-RRE----FEE---DL--DGADLVFAATD   69 (103)
T ss_dssp             TT-EEEEEEESHHHHHHHHHHCCCTB-EEEEEESSE---HHHH--TSCEEE-ESS-----GG---GC--TTESEEEE-SS
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCch---hhhh--hHHHHH-hhh----HHH---HH--hhheEEEecCC
Confidence            57899999999999999999999999 888887665   2222  111111 111    210   01  26899999999


Q ss_pred             ChHhHHHHHHHhhCCCceEEEEcCCCCCc
Q 018529          249 NIDNMISAFECVHDGWGVAVLVGVPSKDA  277 (354)
Q Consensus       249 ~~~~~~~~~~~l~~~~g~~v~~g~~~~~~  277 (354)
                      .+..-+......+.. |.++.....+...
T Consensus        70 d~~~n~~i~~~a~~~-~i~vn~~D~p~~~   97 (103)
T PF13241_consen   70 DPELNEAIYADARAR-GILVNVVDDPELC   97 (103)
T ss_dssp             -HHHHHHHHHHHHHT-TSEEEETT-CCCC
T ss_pred             CHHHHHHHHHHHhhC-CEEEEECCCcCCC
Confidence            876666777777776 8888887655333

>PRK07806 short chain dehydrogenase; Provisional

Probab=96.86  E-value=0.025  Score=48.77  Aligned_cols=101  Identities=19%  Similarity=0.225  Sum_probs=59.9

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChh-hHHH----HHhcCCce-E--EcCCCCChhHHHHHHHHcC--
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSK-RFEE----AKKFGVTD-F--VNTSEHDRPIQEVIAEMTN--  237 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~-~~~~----~~~lg~~~-v--~~~~~~~~~~~~~i~~~~~--  237 (354)
                      +++++||+|+ |.+|...+..+...|. +|+++.++.+ +.+.    ++..+... .  .|..+. .++.+.+++...  
T Consensus         5 ~~k~vlItGasggiG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~   82 (248)
T PRK07806          5 PGKTALVTGSSRGIGADTAKILAGAGA-HVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDE-ESVAALMDTAREEF   82 (248)
T ss_pred             CCcEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCH-HHHHHHHHHHHHhC
Confidence            4678999997 9999999998888898 7888777643 3322    22233321 1  233322 123333333221  


Q ss_pred             CCccEEEEcccCh-------------------HhHHHHHHHhhCCCceEEEEcC
Q 018529          238 GGVDRSVECTGNI-------------------DNMISAFECVHDGWGVAVLVGV  272 (354)
Q Consensus       238 ~~~dvv~d~~g~~-------------------~~~~~~~~~l~~~~g~~v~~g~  272 (354)
                      +++|+++.++|..                   ..++.+.+.+... |++++++.
T Consensus        83 ~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~-~~iv~isS  135 (248)
T PRK07806         83 GGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAG-SRVVFVTS  135 (248)
T ss_pred             CCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCC-ceEEEEeC
Confidence            3689999887642                   1334444445555 78888865

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.86  E-value=0.014  Score=47.15  Aligned_cols=97  Identities=20%  Similarity=0.196  Sum_probs=62.8

Q ss_pred             hhcccchhhhhhhhhhhcCCCCCCeEEEEcCCh-hHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCCh
Q 018529          148 CILSCGVSTGLGATLNVAKPERGSSVAVFGLGA-VGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDR  226 (354)
Q Consensus       148 a~l~~~~~~a~~~l~~~~~~~~~~~vlI~G~g~-~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~  226 (354)
                      ...||...++...+.+...--.+.+|+|+|+|. +|..++..++..|+ +|+++.++.+                     
T Consensus        22 ~~~p~~~~a~v~l~~~~~~~l~gk~vlViG~G~~~G~~~a~~L~~~g~-~V~v~~r~~~---------------------   79 (168)
T cd01080          22 GFIPCTPAGILELLKRYGIDLAGKKVVVVGRSNIVGKPLAALLLNRNA-TVTVCHSKTK---------------------   79 (168)
T ss_pred             CccCChHHHHHHHHHHcCCCCCCCEEEEECCcHHHHHHHHHHHhhCCC-EEEEEECCch---------------------
Confidence            444544444444333333346789999999986 59989999999999 7888866521                     


Q ss_pred             hHHHHHHHHcCCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCC
Q 018529          227 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS  274 (354)
Q Consensus       227 ~~~~~i~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~  274 (354)
                      ++.+.++     .+|+||.+++.+..+..  ..++++ -.++.++.+.
T Consensus        80 ~l~~~l~-----~aDiVIsat~~~~ii~~--~~~~~~-~viIDla~pr  119 (168)
T cd01080          80 NLKEHTK-----QADIVIVAVGKPGLVKG--DMVKPG-AVVIDVGINR  119 (168)
T ss_pred             hHHHHHh-----hCCEEEEcCCCCceecH--HHccCC-eEEEEccCCC
Confidence            1333232     37999999998654333  346664 6666676654

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.85  E-value=0.018  Score=54.67  Aligned_cols=79  Identities=24%  Similarity=0.358  Sum_probs=50.4

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCCh--hhH-HHHHhcCCce-EEcCCCCChhHHHHHHHHc--CCCcc
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS--KRF-EEAKKFGVTD-FVNTSEHDRPIQEVIAEMT--NGGVD  241 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~--~~~-~~~~~lg~~~-v~~~~~~~~~~~~~i~~~~--~~~~d  241 (354)
                      +++++||+|+ |++|...++.+...|+ +|+++++.+  ++. +...+++... ..|..+.+ ...+.+....  .+++|
T Consensus       209 ~g~~vlItGasggIG~~la~~l~~~Ga-~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~-~~~~~~~~~~~~~g~id  286 (450)
T PRK08261        209 AGKVALVTGAARGIGAAIAEVLARDGA-HVVCLDVPAAGEALAAVANRVGGTALALDITAPD-APARIAEHLAERHGGLD  286 (450)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHH-HHHHHHHHHHHhCCCCC
Confidence            5789999987 9999999999999999 788887643  222 2334455432 23444322 1222222222  13689


Q ss_pred             EEEEcccC
Q 018529          242 RSVECTGN  249 (354)
Q Consensus       242 vv~d~~g~  249 (354)
                      ++|+++|.
T Consensus       287 ~vi~~AG~  294 (450)
T PRK08261        287 IVVHNAGI  294 (450)
T ss_pred             EEEECCCc
Confidence            99999883

>PRK08628 short chain dehydrogenase; Provisional

Probab=96.81  E-value=0.022  Score=49.46  Aligned_cols=79  Identities=22%  Similarity=0.244  Sum_probs=50.6

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh---cCCce-E--EcCCCCChhHHHHHHHHc--CCC
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK---FGVTD-F--VNTSEHDRPIQEVIAEMT--NGG  239 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~---lg~~~-v--~~~~~~~~~~~~~i~~~~--~~~  239 (354)
                      ++.++||+|+ |.+|...++.+...|+ +|+.+++++++.+..++   .+... .  .|..+. ..+.+.+.+..  .++
T Consensus         6 ~~~~ilItGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~   83 (258)
T PRK08628          6 KDKVVIVTGGASGIGAAISLRLAEEGA-IPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDD-AQCRDAVEQTVAKFGR   83 (258)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCC-cEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCH-HHHHHHHHHHHHhcCC
Confidence            4678999987 9999998888888899 78888888776644433   33321 1  222221 12333333322  147


Q ss_pred             ccEEEEcccC
Q 018529          240 VDRSVECTGN  249 (354)
Q Consensus       240 ~dvv~d~~g~  249 (354)
                      +|+++.++|.
T Consensus        84 id~vi~~ag~   93 (258)
T PRK08628         84 IDGLVNNAGV   93 (258)
T ss_pred             CCEEEECCcc
Confidence            8999999883

>PRK08265 short chain dehydrogenase; Provisional

Probab=96.81  E-value=0.022  Score=49.67  Aligned_cols=79  Identities=25%  Similarity=0.310  Sum_probs=51.9

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-HhcCCce-E--EcCCCCChhHHHHHHHHc--CCCcc
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTD-F--VNTSEHDRPIQEVIAEMT--NGGVD  241 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~~lg~~~-v--~~~~~~~~~~~~~i~~~~--~~~~d  241 (354)
                      .++++||+|+ |.+|...+..+...|+ +|+.++++.++.+.+ ++++... .  .|..+.+ ++.+.+.+..  .+.+|
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~g~id   82 (261)
T PRK08265          5 AGKVAIVTGGATLIGAAVARALVAAGA-RVAIVDIDADNGAAVAASLGERARFIATDITDDA-AIERAVATVVARFGRVD   82 (261)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHH-HHHHHHHHHHHHhCCCC
Confidence            4679999987 9999999998888999 899999988765544 4444321 1  2333321 2333333221  13689


Q ss_pred             EEEEcccC
Q 018529          242 RSVECTGN  249 (354)
Q Consensus       242 vv~d~~g~  249 (354)
                      +++.++|.
T Consensus        83 ~lv~~ag~   90 (261)
T PRK08265         83 ILVNLACT   90 (261)
T ss_pred             EEEECCCC
Confidence            99998874

>PLN02366 spermidine synthase

Probab=96.78  E-value=0.018  Score=51.40  Aligned_cols=101  Identities=19%  Similarity=0.095  Sum_probs=67.2

Q ss_pred             CCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCC--------ceEEcCCCCChhHHHHHHHHcCC
Q 018529          167 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV--------TDFVNTSEHDRPIQEVIAEMTNG  238 (354)
Q Consensus       167 ~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~--------~~v~~~~~~~~~~~~~i~~~~~~  238 (354)
                      ....++|||+|+|. |.++..+++.-+..+|++++.+++-.+.++++-.        .++-.. ..  +..+.+++..++
T Consensus        89 ~~~pkrVLiIGgG~-G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~vi-~~--Da~~~l~~~~~~  164 (308)
T PLN02366         89 IPNPKKVLVVGGGD-GGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNLH-IG--DGVEFLKNAPEG  164 (308)
T ss_pred             CCCCCeEEEEcCCc-cHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceEEE-EC--hHHHHHhhccCC
Confidence            35578999999876 6667788888766689999999988888877321        111111 11  244445544344


Q ss_pred             CccEEEEcccC----------hHhHHHHHHHhhCCCceEEEEcC
Q 018529          239 GVDRSVECTGN----------IDNMISAFECVHDGWGVAVLVGV  272 (354)
Q Consensus       239 ~~dvv~d~~g~----------~~~~~~~~~~l~~~~g~~v~~g~  272 (354)
                      .+|+||.-...          .+.++.+.++|+++ |.++..+.
T Consensus       165 ~yDvIi~D~~dp~~~~~~L~t~ef~~~~~~~L~pg-Gvlv~q~~  207 (308)
T PLN02366        165 TYDAIIVDSSDPVGPAQELFEKPFFESVARALRPG-GVVCTQAE  207 (308)
T ss_pred             CCCEEEEcCCCCCCchhhhhHHHHHHHHHHhcCCC-cEEEECcC
Confidence            79999853221          25688899999998 99876543

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=96.78  E-value=0.054  Score=45.23  Aligned_cols=93  Identities=13%  Similarity=0.043  Sum_probs=56.0

Q ss_pred             CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChh-h-HHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEc
Q 018529          169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK-R-FEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  246 (354)
Q Consensus       169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~-~-~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~  246 (354)
                      .|.+|||+|+|.+|...+..+...|+ .|++++.... . .+++.+ +.- .+......    +.  .+  .++|+||-+
T Consensus         9 ~~k~vLVIGgG~va~~ka~~Ll~~ga-~V~VIs~~~~~~l~~l~~~-~~i-~~~~~~~~----~~--~l--~~adlViaa   77 (202)
T PRK06718          9 SNKRVVIVGGGKVAGRRAITLLKYGA-HIVVISPELTENLVKLVEE-GKI-RWKQKEFE----PS--DI--VDAFLVIAA   77 (202)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEcCCCCHHHHHHHhC-CCE-EEEecCCC----hh--hc--CCceEEEEc
Confidence            46899999999999999988888998 8888865421 1 222222 211 11111111    00  01  268999999


Q ss_pred             ccChHhHHHHHHHhhCCCceEEEEcCCC
Q 018529          247 TGNIDNMISAFECVHDGWGVAVLVGVPS  274 (354)
Q Consensus       247 ~g~~~~~~~~~~~l~~~~g~~v~~g~~~  274 (354)
                      ++.+ .++..+...+.. +.++......
T Consensus        78 T~d~-elN~~i~~~a~~-~~lvn~~d~~  103 (202)
T PRK06718         78 TNDP-RVNEQVKEDLPE-NALFNVITDA  103 (202)
T ss_pred             CCCH-HHHHHHHHHHHh-CCcEEECCCC
Confidence            9985 445444444454 6666665544

>PRK06953 short chain dehydrogenase; Provisional

Probab=96.77  E-value=0.013  Score=49.75  Aligned_cols=77  Identities=16%  Similarity=0.302  Sum_probs=52.8

Q ss_pred             CeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCce-EEcCCCCChhHHHHHHHHcCCCccEEEEccc
Q 018529          171 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD-FVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  248 (354)
Q Consensus       171 ~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~-v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g  248 (354)
                      ++++|+|+ |.+|...++.+...|+ +|+.++++.++.+.++..+... ..|..+.+ .+.+.+.++..+++|+++.+.|
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~-~v~~~~~~~~~~~~d~vi~~ag   79 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGW-RVIATARDAAALAALQALGAEALALDVADPA-SVAGLAWKLDGEALDAAVYVAG   79 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCC-EEEEEECCHHHHHHHHhccceEEEecCCCHH-HHHHHHHHhcCCCCCEEEECCC
Confidence            46899987 9999998887777898 8999999988877776666532 23333322 2333333333337999999876


Q ss_pred             C
Q 018529          249 N  249 (354)
Q Consensus       249 ~  249 (354)
                      .
T Consensus        80 ~   80 (222)
T PRK06953         80 V   80 (222)
T ss_pred             c
Confidence            5

>PRK06057 short chain dehydrogenase; Provisional

Probab=96.76  E-value=0.011  Score=51.33  Aligned_cols=79  Identities=20%  Similarity=0.292  Sum_probs=52.3

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-HhcCCceE-EcCCCCChhHHHHHHHHc--CCCccEE
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTDF-VNTSEHDRPIQEVIAEMT--NGGVDRS  243 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~~lg~~~v-~~~~~~~~~~~~~i~~~~--~~~~dvv  243 (354)
                      +++++||+|+ |.+|...++.+...|+ +|+++++++++.+.+ .+++...+ .|..+.+ .+.+.+.+..  .+++|++
T Consensus         6 ~~~~vlItGasggIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~id~v   83 (255)
T PRK06057          6 AGRVAVITGGGSGIGLATARRLAAEGA-TVVVGDIDPEAGKAAADEVGGLFVPTDVTDED-AVNALFDTAAETYGSVDIA   83 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHH-HHHHHHHHHHHHcCCCCEE
Confidence            4789999997 9999999999999999 888888888766544 44544222 2333321 2222232221  1368999


Q ss_pred             EEcccC
Q 018529          244 VECTGN  249 (354)
Q Consensus       244 ~d~~g~  249 (354)
                      +.++|.
T Consensus        84 i~~ag~   89 (255)
T PRK06057         84 FNNAGI   89 (255)
T ss_pred             EECCCc
Confidence            998874

>PRK07402 precorrin-6B methylase; Provisional

Probab=96.75  E-value=0.033  Score=46.33  Aligned_cols=105  Identities=19%  Similarity=0.322  Sum_probs=64.2

Q ss_pred             hhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCceEEcCCCCChhHHHHHHHHcC
Q 018529          162 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTN  237 (354)
Q Consensus       162 ~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~~~~  237 (354)
                      .....++++++||=+|+|. |..++.+++.....+|++++.+++..+.+++    ++...+.... .+  ..+.+..+. 
T Consensus        33 ~~~l~~~~~~~VLDiG~G~-G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~~~~-~d--~~~~~~~~~-  107 (196)
T PRK07402         33 ISQLRLEPDSVLWDIGAGT-GTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVEVIE-GS--APECLAQLA-  107 (196)
T ss_pred             HHhcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeEEEE-Cc--hHHHHhhCC-
Confidence            4455778889888888753 5566666765533399999999988877654    5554322111 11  222222222 


Q ss_pred             CCccEE-EEcccC-hHhHHHHHHHhhCCCceEEEEcC
Q 018529          238 GGVDRS-VECTGN-IDNMISAFECVHDGWGVAVLVGV  272 (354)
Q Consensus       238 ~~~dvv-~d~~g~-~~~~~~~~~~l~~~~g~~v~~g~  272 (354)
                      ..+|.+ ++.... ...++.+.+.|+++ |+++....
T Consensus       108 ~~~d~v~~~~~~~~~~~l~~~~~~Lkpg-G~li~~~~  143 (196)
T PRK07402        108 PAPDRVCIEGGRPIKEILQAVWQYLKPG-GRLVATAS  143 (196)
T ss_pred             CCCCEEEEECCcCHHHHHHHHHHhcCCC-eEEEEEee
Confidence            224544 443222 36788899999997 99887743

>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]

Probab=96.75  E-value=0.025  Score=48.16  Aligned_cols=108  Identities=19%  Similarity=0.272  Sum_probs=76.5

Q ss_pred             hhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCceEEcCCCCChhHHHHHHHHc
Q 018529          161 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMT  236 (354)
Q Consensus       161 l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~~~  236 (354)
                      +....+.++|++||=+|+| +|-.|..+++..|-..|+++|.+++-++.+++    .|... +.+...+   ++.+. +.
T Consensus        43 ~i~~~~~~~g~~vLDva~G-TGd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~-i~fv~~d---Ae~LP-f~  116 (238)
T COG2226          43 LISLLGIKPGDKVLDVACG-TGDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQN-VEFVVGD---AENLP-FP  116 (238)
T ss_pred             HHHhhCCCCCCEEEEecCC-ccHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccc-eEEEEec---hhhCC-CC
Confidence            3455566799999998776 48999999999986699999999998888765    23222 1111111   11111 22


Q ss_pred             CCCccEEEEcccC------hHhHHHHHHHhhCCCceEEEEcCCCC
Q 018529          237 NGGVDRSVECTGN------IDNMISAFECVHDGWGVAVLVGVPSK  275 (354)
Q Consensus       237 ~~~~dvv~d~~g~------~~~~~~~~~~l~~~~g~~v~~g~~~~  275 (354)
                      ...||+|..+.|-      +..+.++.+.|+|+ |+++.+....+
T Consensus       117 D~sFD~vt~~fglrnv~d~~~aL~E~~RVlKpg-G~~~vle~~~p  160 (238)
T COG2226         117 DNSFDAVTISFGLRNVTDIDKALKEMYRVLKPG-GRLLVLEFSKP  160 (238)
T ss_pred             CCccCEEEeeehhhcCCCHHHHHHHHHHhhcCC-eEEEEEEcCCC
Confidence            3379999887763      35788999999997 99999887654

>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.75  E-value=0.014  Score=55.78  Aligned_cols=74  Identities=26%  Similarity=0.240  Sum_probs=55.4

Q ss_pred             CCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEE
Q 018529          166 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVE  245 (354)
Q Consensus       166 ~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d  245 (354)
                      .+.++++|+|+|.|..|++++.+++..|+ .|++.+..+++.+.++++|+.. +....    ..+.+     ..+|+|+.
T Consensus         8 ~~~~~~~v~V~G~G~sG~aa~~~L~~~G~-~v~~~D~~~~~~~~l~~~g~~~-~~~~~----~~~~l-----~~~D~VV~   76 (488)
T PRK03369          8 PLLPGAPVLVAGAGVTGRAVLAALTRFGA-RPTVCDDDPDALRPHAERGVAT-VSTSD----AVQQI-----ADYALVVT   76 (488)
T ss_pred             cccCCCeEEEEcCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHhCCCEE-EcCcc----hHhHh-----hcCCEEEE
Confidence            35678999999999999999999999999 8999998777766677788743 22211    11112     14799999


Q ss_pred             cccCh
Q 018529          246 CTGNI  250 (354)
Q Consensus       246 ~~g~~  250 (354)
                      +.|.+
T Consensus        77 SpGi~   81 (488)
T PRK03369         77 SPGFR   81 (488)
T ss_pred             CCCCC
Confidence            98865

>PRK12939 short chain dehydrogenase; Provisional

Probab=96.72  E-value=0.025  Score=48.68  Aligned_cols=79  Identities=24%  Similarity=0.257  Sum_probs=50.4

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH----HhcCCc-eE--EcCCCCChhHHHHHHHHc--CC
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVT-DF--VNTSEHDRPIQEVIAEMT--NG  238 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~----~~lg~~-~v--~~~~~~~~~~~~~i~~~~--~~  238 (354)
                      ++.+++|+|+ |.+|...+..+...|+ +|+++++++++.+.+    ++.+.. .+  .|..+.+ .+.+.+.+..  .+
T Consensus         6 ~~~~vlItGa~g~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~~   83 (250)
T PRK12939          6 AGKRALVTGAARGLGAAFAEALAEAGA-TVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPA-SVQRFFDAAAAALG   83 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHH-HHHHHHHHHHHHcC
Confidence            4688999987 9999999998888999 888888887765533    223332 12  2333221 1222222221  14


Q ss_pred             CccEEEEcccC
Q 018529          239 GVDRSVECTGN  249 (354)
Q Consensus       239 ~~dvv~d~~g~  249 (354)
                      ++|+++.++|.
T Consensus        84 ~id~vi~~ag~   94 (250)
T PRK12939         84 GLDGLVNNAGI   94 (250)
T ss_pred             CCCEEEECCCC
Confidence            79999999875

>CHL00194 ycf39 Ycf39; Provisional

Probab=96.70  E-value=0.029  Score=50.49  Aligned_cols=95  Identities=16%  Similarity=0.196  Sum_probs=61.0

Q ss_pred             eEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEE-cCCCCChhHHHHHHHHcCCCccEEEEcccC
Q 018529          172 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFV-NTSEHDRPIQEVIAEMTNGGVDRSVECTGN  249 (354)
Q Consensus       172 ~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~-~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~  249 (354)
                      +|||+|+ |.+|...+..+...|. .|++++++.++...+...++..+. |..+.     +.+.+.. .++|+||++++.
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~-~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d~-----~~l~~al-~g~d~Vi~~~~~   74 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGY-QVRCLVRNLRKASFLKEWGAELVYGDLSLP-----ETLPPSF-KGVTAIIDASTS   74 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcChHHhhhHhhcCCEEEECCCCCH-----HHHHHHH-CCCCEEEECCCC
Confidence            6899997 9999999998888898 899998887776666556664432 22221     1233322 258999998753


Q ss_pred             hH------------hHHHHHHHhhCC-CceEEEEcCC
Q 018529          250 ID------------NMISAFECVHDG-WGVAVLVGVP  273 (354)
Q Consensus       250 ~~------------~~~~~~~~l~~~-~g~~v~~g~~  273 (354)
                      ..            ....+++.+... ..+++.++..
T Consensus        75 ~~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~  111 (317)
T CHL00194         75 RPSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSIL  111 (317)
T ss_pred             CCCCccchhhhhHHHHHHHHHHHHHcCCCEEEEeccc
Confidence            11            113344444443 1478887764

>COG0421 SpeE Spermidine synthase [Amino acid transport and metabolism]

Probab=96.69  E-value=0.023  Score=49.83  Aligned_cols=100  Identities=17%  Similarity=0.143  Sum_probs=68.6

Q ss_pred             CCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhc-CCceEEcCCCC----ChhHHHHHHHHcCCCcc
Q 018529          167 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF-GVTDFVNTSEH----DRPIQEVIAEMTNGGVD  241 (354)
Q Consensus       167 ~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~l-g~~~v~~~~~~----~~~~~~~i~~~~~~~~d  241 (354)
                      .++ ++|||+|+|. |-.+-.++++....++++++.+++=.++++++ +...--..+..    -.+-.+.+++... ++|
T Consensus        75 ~~p-k~VLiiGgGd-G~tlRevlkh~~ve~i~~VEID~~Vi~~ar~~l~~~~~~~~dpRv~i~i~Dg~~~v~~~~~-~fD  151 (282)
T COG0421          75 PNP-KRVLIIGGGD-GGTLREVLKHLPVERITMVEIDPAVIELARKYLPEPSGGADDPRVEIIIDDGVEFLRDCEE-KFD  151 (282)
T ss_pred             CCC-CeEEEECCCc-cHHHHHHHhcCCcceEEEEEcCHHHHHHHHHhccCcccccCCCceEEEeccHHHHHHhCCC-cCC
Confidence            344 5999998764 55667888888888999999999999999884 22110001000    0124555666544 799


Q ss_pred             EEE-EcccC---------hHhHHHHHHHhhCCCceEEEE
Q 018529          242 RSV-ECTGN---------IDNMISAFECVHDGWGVAVLV  270 (354)
Q Consensus       242 vv~-d~~g~---------~~~~~~~~~~l~~~~g~~v~~  270 (354)
                      +|+ |++..         .+..+.+.++|+++ |.++..
T Consensus       152 vIi~D~tdp~gp~~~Lft~eFy~~~~~~L~~~-Gi~v~q  189 (282)
T COG0421         152 VIIVDSTDPVGPAEALFTEEFYEGCRRALKED-GIFVAQ  189 (282)
T ss_pred             EEEEcCCCCCCcccccCCHHHHHHHHHhcCCC-cEEEEe
Confidence            986 55432         47889999999998 998877

>PRK06949 short chain dehydrogenase; Provisional

Probab=96.69  E-value=0.012  Score=51.17  Aligned_cols=80  Identities=24%  Similarity=0.345  Sum_probs=52.6

Q ss_pred             CCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCC-ceEE--cCCCCChhHHHHHHHHc--C
Q 018529          168 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGV-TDFV--NTSEHDRPIQEVIAEMT--N  237 (354)
Q Consensus       168 ~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~-~~v~--~~~~~~~~~~~~i~~~~--~  237 (354)
                      ..++++||+|+ |.+|...+..+...|+ +|+++.+++++.+.+.+    .+. ..++  |..+. .++.+.+++..  .
T Consensus         7 ~~~k~ilItGasg~IG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~   84 (258)
T PRK06949          7 LEGKVALVTGASSGLGARFAQVLAQAGA-KVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDY-QSIKAAVAHAETEA   84 (258)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCH-HHHHHHHHHHHHhc
Confidence            45789999987 9999999999998999 89999998887654432    122 1222  33221 22333333321  2


Q ss_pred             CCccEEEEcccC
Q 018529          238 GGVDRSVECTGN  249 (354)
Q Consensus       238 ~~~dvv~d~~g~  249 (354)
                      +++|+++++.|.
T Consensus        85 ~~~d~li~~ag~   96 (258)
T PRK06949         85 GTIDILVNNSGV   96 (258)
T ss_pred             CCCCEEEECCCC
Confidence            378999999883

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=96.68  E-value=0.017  Score=51.02  Aligned_cols=44  Identities=23%  Similarity=0.240  Sum_probs=38.3

Q ss_pred             CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH
Q 018529          168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK  211 (354)
Q Consensus       168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~  211 (354)
                      ..+.+|+|+|+|++|.+++..+...|+.+|+.++++.+|.+.+.
T Consensus       125 ~~~k~vlIlGaGGaaraia~aL~~~G~~~I~I~nR~~~ka~~la  168 (284)
T PRK12549        125 ASLERVVQLGAGGAGAAVAHALLTLGVERLTIFDVDPARAAALA  168 (284)
T ss_pred             ccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH
Confidence            35678999999999999999999999989999999988877553

>PRK00811 spermidine synthase; Provisional

Probab=96.67  E-value=0.014  Score=51.59  Aligned_cols=98  Identities=16%  Similarity=0.145  Sum_probs=65.4

Q ss_pred             CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcC------C---ceEEcCCCCChhHHHHHHHHcCC
Q 018529          168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG------V---TDFVNTSEHDRPIQEVIAEMTNG  238 (354)
Q Consensus       168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg------~---~~v~~~~~~~~~~~~~i~~~~~~  238 (354)
                      ...++||++|+|. |..+..+++..+..+|++++.+++-.+.+++.-      .   .++- ....+  ..+.++. ..+
T Consensus        75 ~~p~~VL~iG~G~-G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~-v~~~D--a~~~l~~-~~~  149 (283)
T PRK00811         75 PNPKRVLIIGGGD-GGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRVE-LVIGD--GIKFVAE-TEN  149 (283)
T ss_pred             CCCCEEEEEecCc-hHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCceE-EEECc--hHHHHhh-CCC
Confidence            4567999999875 777777788767779999999999888887631      1   1111 11111  3344443 344


Q ss_pred             CccEEEEccc----------ChHhHHHHHHHhhCCCceEEEEc
Q 018529          239 GVDRSVECTG----------NIDNMISAFECVHDGWGVAVLVG  271 (354)
Q Consensus       239 ~~dvv~d~~g----------~~~~~~~~~~~l~~~~g~~v~~g  271 (354)
                      .+|+|+.-..          ..+.++.+.+.|+++ |.++...
T Consensus       150 ~yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~g-Gvlv~~~  191 (283)
T PRK00811        150 SFDVIIVDSTDPVGPAEGLFTKEFYENCKRALKED-GIFVAQS  191 (283)
T ss_pred             cccEEEECCCCCCCchhhhhHHHHHHHHHHhcCCC-cEEEEeC
Confidence            8999985321          134567888999997 9988653

>PRK07109 short chain dehydrogenase; Provisional

Probab=96.67  E-value=0.026  Score=51.19  Aligned_cols=79  Identities=19%  Similarity=0.265  Sum_probs=52.2

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH----HhcCCceE---EcCCCCChhHHHHHHHHc--CC
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTDF---VNTSEHDRPIQEVIAEMT--NG  238 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~----~~lg~~~v---~~~~~~~~~~~~~i~~~~--~~  238 (354)
                      .+.+++|+|+ |++|...++.+...|+ +|+.+++++++.+.+    ++.|....   .|..+.+ ++.+.+....  -+
T Consensus         7 ~~k~vlITGas~gIG~~la~~la~~G~-~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~-~v~~~~~~~~~~~g   84 (334)
T PRK07109          7 GRQVVVITGASAGVGRATARAFARRGA-KVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAE-AVQAAADRAEEELG   84 (334)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHH-HHHHHHHHHHHHCC
Confidence            4678999987 9999999999888999 888888988776543    33454322   2333321 2222222221  14


Q ss_pred             CccEEEEcccC
Q 018529          239 GVDRSVECTGN  249 (354)
Q Consensus       239 ~~dvv~d~~g~  249 (354)
                      ++|++++++|.
T Consensus        85 ~iD~lInnAg~   95 (334)
T PRK07109         85 PIDTWVNNAMV   95 (334)
T ss_pred             CCCEEEECCCc
Confidence            79999999874

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=96.65  E-value=0.016  Score=50.57  Aligned_cols=79  Identities=27%  Similarity=0.358  Sum_probs=60.1

Q ss_pred             CCCCeEEEEcC-ChhHHH-HHHHHHHcCCcEEEEEcCChhhHHHHHh-----cCC---ceEEcCCCCChhHHHHHHHHcC
Q 018529          168 ERGSSVAVFGL-GAVGLA-AAEGARIAGASRIIGVDRSSKRFEEAKK-----FGV---TDFVNTSEHDRPIQEVIAEMTN  237 (354)
Q Consensus       168 ~~~~~vlI~G~-g~~G~~-a~~~a~~~g~~~vi~v~~~~~~~~~~~~-----lg~---~~v~~~~~~~~~~~~~i~~~~~  237 (354)
                      +-|++.+|+|+ .++|.+ |-++|+ .|. +|+.+.|+++|++..++     .++   ..++|+.+.+. ..+.+++...
T Consensus        47 ~~g~WAVVTGaTDGIGKayA~eLAk-rG~-nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~-~ye~i~~~l~  123 (312)
T KOG1014|consen   47 KLGSWAVVTGATDGIGKAYARELAK-RGF-NVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDE-VYEKLLEKLA  123 (312)
T ss_pred             hcCCEEEEECCCCcchHHHHHHHHH-cCC-EEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCch-hHHHHHHHhc
Confidence            45789999998 899977 777777 899 79999999999887643     453   23577777764 4556666666


Q ss_pred             C-CccEEEEcccC
Q 018529          238 G-GVDRSVECTGN  249 (354)
Q Consensus       238 ~-~~dvv~d~~g~  249 (354)
                      + .+-+.++++|.
T Consensus       124 ~~~VgILVNNvG~  136 (312)
T KOG1014|consen  124 GLDVGILVNNVGM  136 (312)
T ss_pred             CCceEEEEecccc
Confidence            6 77888999884

>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial

Probab=96.64  E-value=0.0096  Score=56.66  Aligned_cols=79  Identities=27%  Similarity=0.356  Sum_probs=55.9

Q ss_pred             CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCCh---------------------hhHHHHHhcCCceEEcCCCCCh
Q 018529          168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS---------------------KRFEEAKKFGVTDFVNTSEHDR  226 (354)
Q Consensus       168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~---------------------~~~~~~~~lg~~~v~~~~~~~~  226 (354)
                      ..+++|+|+|+|+.|+.++..+...|. .|+.++..+                     ...++++++|++..++..-.. 
T Consensus       139 ~~~~~V~IIG~GpaGl~aA~~l~~~G~-~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v~~-  216 (467)
T TIGR01318       139 PTGKRVAVIGAGPAGLACADILARAGV-QVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNCEVGR-  216 (467)
T ss_pred             CCCCeEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCCEeCC-
Confidence            368899999999999999999999999 788887653                     245677889987655442211 


Q ss_pred             hHHHHHHHHcCCCccEEEEcccChH
Q 018529          227 PIQEVIAEMTNGGVDRSVECTGNID  251 (354)
Q Consensus       227 ~~~~~i~~~~~~~~dvv~d~~g~~~  251 (354)
                      ++  .+..+. .++|.||.++|...
T Consensus       217 ~~--~~~~~~-~~~D~vilAtGa~~  238 (467)
T TIGR01318       217 DI--SLDDLL-EDYDAVFLGVGTYR  238 (467)
T ss_pred             cc--CHHHHH-hcCCEEEEEeCCCC
Confidence            11  111221 25999999999743

This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.

>PLN03075 nicotianamine synthase; Provisional

Probab=96.63  E-value=0.014  Score=51.27  Aligned_cols=99  Identities=13%  Similarity=0.095  Sum_probs=66.8

Q ss_pred             CCCCeEEEEcCChhHHHHHHHHHHcCC-cEEEEEcCChhhHHHHHhcC-----CceEEcCCCCChhHHHHHHHHcCCCcc
Q 018529          168 ERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKKFG-----VTDFVNTSEHDRPIQEVIAEMTNGGVD  241 (354)
Q Consensus       168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~-~~vi~v~~~~~~~~~~~~lg-----~~~v~~~~~~~~~~~~~i~~~~~~~~d  241 (354)
                      .+.++|+-+|+|+.++.++.++..+.. .+++++|.+++..++++++-     ...-+.+...+  ..+....  .++||
T Consensus       122 ~~p~~VldIGcGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~~D--a~~~~~~--l~~FD  197 (296)
T PLN03075        122 GVPTKVAFVGSGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHTAD--VMDVTES--LKEYD  197 (296)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEECc--hhhcccc--cCCcC
Confidence            377999999999999998888875532 38999999999988887633     22212222222  2221101  24799


Q ss_pred             EEEEcc-------cChHhHHHHHHHhhCCCceEEEEc
Q 018529          242 RSVECT-------GNIDNMISAFECVHDGWGVAVLVG  271 (354)
Q Consensus       242 vv~d~~-------g~~~~~~~~~~~l~~~~g~~v~~g  271 (354)
                      +||..+       .....++.+.+.|+++ |.+++-.
T Consensus       198 lVF~~ALi~~dk~~k~~vL~~l~~~LkPG-G~Lvlr~  233 (296)
T PLN03075        198 VVFLAALVGMDKEEKVKVIEHLGKHMAPG-ALLMLRS  233 (296)
T ss_pred             EEEEecccccccccHHHHHHHHHHhcCCC-cEEEEec
Confidence            999765       2235678899999997 8876553

>PRK07831 short chain dehydrogenase; Provisional

Probab=96.62  E-value=0.018  Score=50.19  Aligned_cols=81  Identities=26%  Similarity=0.356  Sum_probs=52.4

Q ss_pred             CCCCCeEEEEcC-C-hhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh-----cCCceE--E--cCCCCChhHHHHHHHH
Q 018529          167 PERGSSVAVFGL-G-AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-----FGVTDF--V--NTSEHDRPIQEVIAEM  235 (354)
Q Consensus       167 ~~~~~~vlI~G~-g-~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~-----lg~~~v--~--~~~~~~~~~~~~i~~~  235 (354)
                      +.+++++||+|+ | ++|.+.++.+...|+ +|+++++++++.+...+     ++...+  +  |..+.+ .+.+.+.+.
T Consensus        14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~   91 (262)
T PRK07831         14 LLAGKVVLVTAAAGTGIGSATARRALEEGA-RVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEA-QVDALIDAA   91 (262)
T ss_pred             ccCCCEEEEECCCcccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHH-HHHHHHHHH
Confidence            445789999986 6 799999999999999 78888888776554322     443222  2  332221 222223222


Q ss_pred             c--CCCccEEEEcccC
Q 018529          236 T--NGGVDRSVECTGN  249 (354)
Q Consensus       236 ~--~~~~dvv~d~~g~  249 (354)
                      .  .+++|++++++|.
T Consensus        92 ~~~~g~id~li~~ag~  107 (262)
T PRK07831         92 VERLGRLDVLVNNAGL  107 (262)
T ss_pred             HHHcCCCCEEEECCCC
Confidence            1  1478999999984

>PRK12829 short chain dehydrogenase; Provisional

Probab=96.62  E-value=0.012  Score=51.25  Aligned_cols=82  Identities=27%  Similarity=0.310  Sum_probs=53.1

Q ss_pred             CCCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh-cCCc--eE--EcCCCCChhHHHHHHHHc--C
Q 018529          166 KPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVT--DF--VNTSEHDRPIQEVIAEMT--N  237 (354)
Q Consensus       166 ~~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~-lg~~--~v--~~~~~~~~~~~~~i~~~~--~  237 (354)
                      ..-++.++||+|+ |.+|...+..+...|+ +|+.+.++++..+.+.+ ..-.  .+  .|..+.. .+.+.+.+..  .
T Consensus         7 ~~~~~~~vlItGa~g~iG~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~   84 (264)
T PRK12829          7 KPLDGLRVLVTGGASGIGRAIAEAFAEAGA-RVHVCDVSEAALAATAARLPGAKVTATVADVADPA-QVERVFDTAVERF   84 (264)
T ss_pred             hccCCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHH-HHHHHHHHHHHHh
Confidence            3457789999987 9999999999999999 79999888776655433 2211  12  2322221 1222222221  1


Q ss_pred             CCccEEEEcccC
Q 018529          238 GGVDRSVECTGN  249 (354)
Q Consensus       238 ~~~dvv~d~~g~  249 (354)
                      +++|+|+.++|.
T Consensus        85 ~~~d~vi~~ag~   96 (264)
T PRK12829         85 GGLDVLVNNAGI   96 (264)
T ss_pred             CCCCEEEECCCC
Confidence            379999998875

>PRK07576 short chain dehydrogenase; Provisional

Probab=96.62  E-value=0.054  Score=47.30  Aligned_cols=78  Identities=22%  Similarity=0.305  Sum_probs=50.5

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH----HhcCCc-eE--EcCCCCChhHHHHHHHHc--CC
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVT-DF--VNTSEHDRPIQEVIAEMT--NG  238 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~----~~lg~~-~v--~~~~~~~~~~~~~i~~~~--~~  238 (354)
                      ++.++||+|+ |.+|...++.+...|+ +|+.+++++++.+.+    .+.+.. ..  .|..+. ..+.+.+++..  .+
T Consensus         8 ~~k~ilItGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~i~~~~~~~~~~~~   85 (264)
T PRK07576          8 AGKNVVVVGGTSGINLGIAQAFARAGA-NVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDY-AAVEAAFAQIADEFG   85 (264)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCH-HHHHHHHHHHHHHcC
Confidence            5789999987 9999999998888999 899998887665433    222322 12  233322 12333333332  13


Q ss_pred             CccEEEEccc
Q 018529          239 GVDRSVECTG  248 (354)
Q Consensus       239 ~~dvv~d~~g  248 (354)
                      ++|+++.+.|
T Consensus        86 ~iD~vi~~ag   95 (264)
T PRK07576         86 PIDVLVSGAA   95 (264)
T ss_pred             CCCEEEECCC
Confidence            6899998876

>PRK08267 short chain dehydrogenase; Provisional

Probab=96.61  E-value=0.051  Score=47.21  Aligned_cols=77  Identities=17%  Similarity=0.211  Sum_probs=51.7

Q ss_pred             CeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh-cC-Cc-e--EEcCCCCChhHHHHHHHHc---CCCcc
Q 018529          171 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FG-VT-D--FVNTSEHDRPIQEVIAEMT---NGGVD  241 (354)
Q Consensus       171 ~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~-lg-~~-~--v~~~~~~~~~~~~~i~~~~---~~~~d  241 (354)
                      +++||+|+ |.+|...++.+...|+ +|++++++.++.+.+.+ ++ .. .  ..|..+.+ ++.+.+....   .+++|
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~v~~~~~~~~~~~~~~id   79 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGW-RVGAYDINEAGLAALAAELGAGNAWTGALDVTDRA-AWDAALADFAAATGGRLD   79 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHH-HHHHHHHHHHHHcCCCCC
Confidence            47899987 9999999998888899 89999898887665533 32 11 1  23433322 2333333321   34799


Q ss_pred             EEEEcccC
Q 018529          242 RSVECTGN  249 (354)
Q Consensus       242 vv~d~~g~  249 (354)
                      +++.++|.
T Consensus        80 ~vi~~ag~   87 (260)
T PRK08267         80 VLFNNAGI   87 (260)
T ss_pred             EEEECCCC
Confidence            99999875

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=96.61  E-value=0.014  Score=53.68  Aligned_cols=97  Identities=25%  Similarity=0.254  Sum_probs=66.9

Q ss_pred             CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHH-HHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEc
Q 018529          168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFE-EAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  246 (354)
Q Consensus       168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~-~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~  246 (354)
                      -.+.++||+|+|-+|.+++..+...|...|+...|+.+|.+ +++++|+. ++.+++    ..+.+.     .+|+||.+
T Consensus       176 L~~~~vlvIGAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~-~~~l~e----l~~~l~-----~~DvViss  245 (414)
T COG0373         176 LKDKKVLVIGAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAE-AVALEE----LLEALA-----EADVVISS  245 (414)
T ss_pred             cccCeEEEEcccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCe-eecHHH----HHHhhh-----hCCEEEEe
Confidence            47889999999999999999999999889999999998866 56778853 332222    222221     48999999


Q ss_pred             ccChHh---HHHHHHHhhCCCc-eEEEEcCCC
Q 018529          247 TGNIDN---MISAFECVHDGWG-VAVLVGVPS  274 (354)
Q Consensus       247 ~g~~~~---~~~~~~~l~~~~g-~~v~~g~~~  274 (354)
                      ++.+..   -......++.... -++.++.+.
T Consensus       246 Tsa~~~ii~~~~ve~a~~~r~~~livDiavPR  277 (414)
T COG0373         246 TSAPHPIITREMVERALKIRKRLLIVDIAVPR  277 (414)
T ss_pred             cCCCccccCHHHHHHHHhcccCeEEEEecCCC
Confidence            987643   2344455555412 245555543

>PLN02780 ketoreductase/ oxidoreductase

Probab=96.60  E-value=0.016  Score=52.30  Aligned_cols=80  Identities=20%  Similarity=0.209  Sum_probs=53.1

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh-----cC-Cc---eEEcCCCCChhHHHHHHHHcCC
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-----FG-VT---DFVNTSEHDRPIQEVIAEMTNG  238 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~-----lg-~~---~v~~~~~~~~~~~~~i~~~~~~  238 (354)
                      .|.+++|+|+ |++|.+.+..+...|+ +|+.+++++++.+.+.+     .+ ..   ...|..++..+..+.+.+...+
T Consensus        52 ~g~~~lITGAs~GIG~alA~~La~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~  130 (320)
T PLN02780         52 YGSWALVTGPTDGIGKGFAFQLARKGL-NLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEG  130 (320)
T ss_pred             cCCEEEEeCCCcHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcC
Confidence            5889999997 9999988877777899 89999999988765422     22 11   1234443222344445544444


Q ss_pred             -CccEEEEcccC
Q 018529          239 -GVDRSVECTGN  249 (354)
Q Consensus       239 -~~dvv~d~~g~  249 (354)
                       .+|++++++|.
T Consensus       131 ~didilVnnAG~  142 (320)
T PLN02780        131 LDVGVLINNVGV  142 (320)
T ss_pred             CCccEEEEecCc
Confidence             57799998763

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=96.60  E-value=0.025  Score=47.32  Aligned_cols=35  Identities=34%  Similarity=0.358  Sum_probs=31.4

Q ss_pred             CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCC
Q 018529          169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS  203 (354)
Q Consensus       169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~  203 (354)
                      ...+|+|+|+|++|...++.+...|.++++.+|.+
T Consensus        20 ~~~~VlviG~GglGs~ia~~La~~Gv~~i~lvD~d   54 (202)
T TIGR02356        20 LNSHVLIIGAGGLGSPAALYLAGAGVGTIVIVDDD   54 (202)
T ss_pred             cCCCEEEECCCHHHHHHHHHHHHcCCCeEEEecCC
Confidence            35789999999999999999999999899999876

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=96.60  E-value=0.058  Score=43.04  Aligned_cols=89  Identities=15%  Similarity=0.075  Sum_probs=54.9

Q ss_pred             CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEccc
Q 018529          169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  248 (354)
Q Consensus       169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g  248 (354)
                      .|.+|+|+|+|.+|.--++.+...|+ .|++++  ++..+.+.+++.-. +....    +.+    ..-.++|+|+-+++
T Consensus        12 ~~~~vlVvGGG~va~rka~~Ll~~ga-~V~VIs--p~~~~~l~~l~~i~-~~~~~----~~~----~dl~~a~lViaaT~   79 (157)
T PRK06719         12 HNKVVVIIGGGKIAYRKASGLKDTGA-FVTVVS--PEICKEMKELPYIT-WKQKT----FSN----DDIKDAHLIYAATN   79 (157)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEc--CccCHHHHhccCcE-EEecc----cCh----hcCCCceEEEECCC
Confidence            57899999999999998888888899 888773  44434444454211 11111    111    01136899999998


Q ss_pred             ChHhHHHHHHHhhCCCceEEEEc
Q 018529          249 NIDNMISAFECVHDGWGVAVLVG  271 (354)
Q Consensus       249 ~~~~~~~~~~~l~~~~g~~v~~g  271 (354)
                      . +..+..+...+.. +.++...
T Consensus        80 d-~e~N~~i~~~a~~-~~~vn~~  100 (157)
T PRK06719         80 Q-HAVNMMVKQAAHD-FQWVNVV  100 (157)
T ss_pred             C-HHHHHHHHHHHHH-CCcEEEC
Confidence            8 4455555555444 4444443

>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences

Probab=96.60  E-value=0.0098  Score=52.51  Aligned_cols=96  Identities=23%  Similarity=0.307  Sum_probs=60.2

Q ss_pred             CCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCc-eEEcCCCCChhHHHHHHHHcCCCcc
Q 018529          167 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT-DFVNTSEHDRPIQEVIAEMTNGGVD  241 (354)
Q Consensus       167 ~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~-~v~~~~~~~~~~~~~i~~~~~~~~d  241 (354)
                      .++|++||=+|+|. |.+++..++ +|+++|++++.++...+.+++    -|.. .+......+         ...+.||
T Consensus       159 ~~~g~~vLDvG~GS-GILaiaA~k-lGA~~v~a~DiDp~Av~~a~~N~~~N~~~~~~~v~~~~~---------~~~~~~d  227 (295)
T PF06325_consen  159 VKPGKRVLDVGCGS-GILAIAAAK-LGAKKVVAIDIDPLAVEAARENAELNGVEDRIEVSLSED---------LVEGKFD  227 (295)
T ss_dssp             SSTTSEEEEES-TT-SHHHHHHHH-TTBSEEEEEESSCHHHHHHHHHHHHTT-TTCEEESCTSC---------TCCS-EE
T ss_pred             ccCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEecCCHHHHHHHHHHHHHcCCCeeEEEEEecc---------cccccCC
Confidence            67889999999863 666666555 598899999999987777654    2322 221111111         1125799


Q ss_pred             EEEEcccChH---hHHHHHHHhhCCCceEEEEcCCC
Q 018529          242 RSVECTGNID---NMISAFECVHDGWGVAVLVGVPS  274 (354)
Q Consensus       242 vv~d~~g~~~---~~~~~~~~l~~~~g~~v~~g~~~  274 (354)
                      +|+-..-...   ......+.++++ |.+++.|...
T Consensus       228 lvvANI~~~vL~~l~~~~~~~l~~~-G~lIlSGIl~  262 (295)
T PF06325_consen  228 LVVANILADVLLELAPDIASLLKPG-GYLILSGILE  262 (295)
T ss_dssp             EEEEES-HHHHHHHHHHCHHHEEEE-EEEEEEEEEG
T ss_pred             EEEECCCHHHHHHHHHHHHHhhCCC-CEEEEccccH
Confidence            9996654422   333455678887 9999888765

Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A ....

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=96.60  E-value=0.014  Score=50.92  Aligned_cols=78  Identities=23%  Similarity=0.279  Sum_probs=51.7

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhc-CCce-E--EcCCCCChhHHHHHHHHcC--CCcc
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF-GVTD-F--VNTSEHDRPIQEVIAEMTN--GGVD  241 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~l-g~~~-v--~~~~~~~~~~~~~i~~~~~--~~~d  241 (354)
                      ++++++|+|+ |++|...++.+...|+ +|+++++++++.+.+.+. +... .  .|..+. ....+.+++...  +.+|
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~g~id   81 (262)
T TIGR03325         4 KGEVVLVTGGASGLGRAIVDRFVAEGA-RVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSL-DDHKEAVARCVAAFGKID   81 (262)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCceEEEEeccCCH-HHHHHHHHHHHHHhCCCC
Confidence            4789999987 9999999988888999 899998988776665543 3211 1  233222 123333333221  4689


Q ss_pred             EEEEccc
Q 018529          242 RSVECTG  248 (354)
Q Consensus       242 vv~d~~g  248 (354)
                      ++++++|
T Consensus        82 ~li~~Ag   88 (262)
T TIGR03325        82 CLIPNAG   88 (262)
T ss_pred             EEEECCC
Confidence            9999886

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK07814 short chain dehydrogenase; Provisional

Probab=96.58  E-value=0.014  Score=50.97  Aligned_cols=79  Identities=19%  Similarity=0.260  Sum_probs=51.1

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCc-eE--EcCCCCChhHHHHHHHHc--CC
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT-DF--VNTSEHDRPIQEVIAEMT--NG  238 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~-~v--~~~~~~~~~~~~~i~~~~--~~  238 (354)
                      ++.++||+|+ |.+|...++.+...|+ +|+++++++++.+.+.+    .+.. .+  .|..+.+ .+.+.+.+..  -+
T Consensus         9 ~~~~vlItGasggIG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~   86 (263)
T PRK07814          9 DDQVAVVTGAGRGLGAAIALAFAEAGA-DVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPE-ATAGLAGQAVEAFG   86 (263)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHH-HHHHHHHHHHHHcC
Confidence            5789999987 8999999998888999 89999998876554322    2322 12  2333221 1222222221  14


Q ss_pred             CccEEEEcccC
Q 018529          239 GVDRSVECTGN  249 (354)
Q Consensus       239 ~~dvv~d~~g~  249 (354)
                      ++|++|+++|.
T Consensus        87 ~id~vi~~Ag~   97 (263)
T PRK07814         87 RLDIVVNNVGG   97 (263)
T ss_pred             CCCEEEECCCC
Confidence            79999998873

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=96.57  E-value=0.016  Score=50.61  Aligned_cols=79  Identities=23%  Similarity=0.311  Sum_probs=52.4

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh-cCCc-eEE--cCCCCChhHHHHHHHHc--CCCcc
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVT-DFV--NTSEHDRPIQEVIAEMT--NGGVD  241 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~-lg~~-~v~--~~~~~~~~~~~~i~~~~--~~~~d  241 (354)
                      +++++||+|+ |++|...++.+...|+ +|+.+++++++.+.+.+ ++.. ..+  |..+. ..+.+.+.+..  .+.+|
T Consensus         5 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~g~id   82 (263)
T PRK06200          5 HGQVALITGGGSGIGRALVERFLAEGA-RVAVLERSAEKLASLRQRFGDHVLVVEGDVTSY-ADNQRAVDQTVDAFGKLD   82 (263)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCcceEEEccCCCH-HHHHHHHHHHHHhcCCCC
Confidence            4689999987 9999999988888999 89999998887766543 4321 122  22221 12333333322  13689


Q ss_pred             EEEEcccC
Q 018529          242 RSVECTGN  249 (354)
Q Consensus       242 vv~d~~g~  249 (354)
                      ++++++|.
T Consensus        83 ~li~~ag~   90 (263)
T PRK06200         83 CFVGNAGI   90 (263)
T ss_pred             EEEECCCC
Confidence            99998873

>PLN02781 Probable caffeoyl-CoA O-methyltransferase

Probab=96.57  E-value=0.023  Score=48.65  Aligned_cols=105  Identities=15%  Similarity=0.160  Sum_probs=69.5

Q ss_pred             hhcCCCCCCeEEEEcCChhHHHHHHHHHHcC-CcEEEEEcCChhhHHHHHh----cCCceEEcCCCCChhHHHHHHHHc-
Q 018529          163 NVAKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMT-  236 (354)
Q Consensus       163 ~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g-~~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~~~-  236 (354)
                      ...+..+.++||=+|+| +|+.++.+|..++ ..+|++++.+++..+.+++    .|...-+.....+  ..+.+.++. 
T Consensus        62 ~l~~~~~~~~vLEiGt~-~G~s~l~la~~~~~~g~v~tiD~d~~~~~~A~~n~~~~gl~~~i~~~~gd--a~~~L~~l~~  138 (234)
T PLN02781         62 MLVKIMNAKNTLEIGVF-TGYSLLTTALALPEDGRITAIDIDKEAYEVGLEFIKKAGVDHKINFIQSD--ALSALDQLLN  138 (234)
T ss_pred             HHHHHhCCCEEEEecCc-ccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcc--HHHHHHHHHh
Confidence            34566778899988874 4777777777663 3499999999988887754    4553222222222  444455442 


Q ss_pred             ---CCCccEEEEccc---ChHhHHHHHHHhhCCCceEEEEc
Q 018529          237 ---NGGVDRSVECTG---NIDNMISAFECVHDGWGVAVLVG  271 (354)
Q Consensus       237 ---~~~~dvv~d~~g---~~~~~~~~~~~l~~~~g~~v~~g  271 (354)
                         .+.||+||.-..   -...++.+.+.++++ |.+++-.
T Consensus       139 ~~~~~~fD~VfiDa~k~~y~~~~~~~~~ll~~G-G~ii~dn  178 (234)
T PLN02781        139 NDPKPEFDFAFVDADKPNYVHFHEQLLKLVKVG-GIIAFDN  178 (234)
T ss_pred             CCCCCCCCEEEECCCHHHHHHHHHHHHHhcCCC-eEEEEEc
Confidence               237999985432   235688889999997 8877544

>PRK05872 short chain dehydrogenase; Provisional

Probab=96.55  E-value=0.017  Score=51.43  Aligned_cols=79  Identities=23%  Similarity=0.339  Sum_probs=53.3

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-HhcCC--ceE---EcCCCCChhHHHHHHHHcC--CC
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGV--TDF---VNTSEHDRPIQEVIAEMTN--GG  239 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~~lg~--~~v---~~~~~~~~~~~~~i~~~~~--~~  239 (354)
                      +++++||+|+ |++|...++.+...|+ +|+.+++++++.+.+ ++++.  ...   .|..+.+ ++.+.+.+...  ++
T Consensus         8 ~gk~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~-~v~~~~~~~~~~~g~   85 (296)
T PRK05872          8 AGKVVVVTGAARGIGAELARRLHARGA-KLALVDLEEAELAALAAELGGDDRVLTVVADVTDLA-AMQAAAEEAVERFGG   85 (296)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHH-HHHHHHHHHHHHcCC
Confidence            5789999987 9999999999999999 899999988876654 44542  111   3333321 22233332221  47


Q ss_pred             ccEEEEcccC
Q 018529          240 VDRSVECTGN  249 (354)
Q Consensus       240 ~dvv~d~~g~  249 (354)
                      +|++++++|.
T Consensus        86 id~vI~nAG~   95 (296)
T PRK05872         86 IDVVVANAGI   95 (296)
T ss_pred             CCEEEECCCc
Confidence            9999999884

>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed

Probab=96.55  E-value=0.012  Score=58.41  Aligned_cols=76  Identities=26%  Similarity=0.314  Sum_probs=56.3

Q ss_pred             CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChh---------------------hHHHHHhcCCceEEcCCCCC-h
Q 018529          169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK---------------------RFEEAKKFGVTDFVNTSEHD-R  226 (354)
Q Consensus       169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~---------------------~~~~~~~lg~~~v~~~~~~~-~  226 (354)
                      .+++|+|+|+|+.|+.++..+...|. .|+++++.+.                     +.++++++|++..++..-.. .
T Consensus       309 ~~kkVaIIG~GpaGl~aA~~L~~~G~-~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~~  387 (639)
T PRK12809        309 RSEKVAVIGAGPAGLGCADILARAGV-QVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIGRDI  387 (639)
T ss_pred             CCCEEEEECcCHHHHHHHHHHHHcCC-cEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEEEcCCccCCcC
Confidence            48999999999999999999999999 7888876652                     55677889987666543221 1


Q ss_pred             hHHHHHHHHcCCCccEEEEcccCh
Q 018529          227 PIQEVIAEMTNGGVDRSVECTGNI  250 (354)
Q Consensus       227 ~~~~~i~~~~~~~~dvv~d~~g~~  250 (354)
                      .+.    ++. .++|.||.++|..
T Consensus       388 ~~~----~l~-~~~DaV~latGa~  406 (639)
T PRK12809        388 TFS----DLT-SEYDAVFIGVGTY  406 (639)
T ss_pred             CHH----HHH-hcCCEEEEeCCCC
Confidence            122    221 2689999999873

>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]

Probab=96.55  E-value=0.035  Score=47.13  Aligned_cols=104  Identities=24%  Similarity=0.261  Sum_probs=73.0

Q ss_pred             hhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCC-cEEEEEcCChhhHHHHHh----cCCceEEcCCCCChhHHHHHHHHc
Q 018529          162 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMT  236 (354)
Q Consensus       162 ~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~-~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~~~  236 (354)
                      ....++.+|++|+=.|.|+ |.+++.+|++.|. .+|+..+..++..+.+++    +|....+.....|  ..+.+..  
T Consensus        87 ~~~~gi~pg~rVlEAGtGS-G~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~~~D--v~~~~~~--  161 (256)
T COG2519          87 VARLGISPGSRVLEAGTGS-GALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLKLGD--VREGIDE--  161 (256)
T ss_pred             HHHcCCCCCCEEEEcccCc-hHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEEecc--ccccccc--
Confidence            4578999999999888764 8888899988875 599999999998888754    4553322222222  2222111  


Q ss_pred             CCCccEEEEcccC-hHhHHHHHHHhhCCCceEEEEcC
Q 018529          237 NGGVDRSVECTGN-IDNMISAFECVHDGWGVAVLVGV  272 (354)
Q Consensus       237 ~~~~dvv~d~~g~-~~~~~~~~~~l~~~~g~~v~~g~  272 (354)
                       ..+|+||-=.+. -+.++.+.+.|+++ |.++++.-
T Consensus       162 -~~vDav~LDmp~PW~~le~~~~~Lkpg-g~~~~y~P  196 (256)
T COG2519         162 -EDVDAVFLDLPDPWNVLEHVSDALKPG-GVVVVYSP  196 (256)
T ss_pred             -cccCEEEEcCCChHHHHHHHHHHhCCC-cEEEEEcC
Confidence             268988644443 46899999999997 99988853

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=96.53  E-value=0.01  Score=52.00  Aligned_cols=45  Identities=36%  Similarity=0.425  Sum_probs=40.2

Q ss_pred             CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh
Q 018529          168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK  212 (354)
Q Consensus       168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~  212 (354)
                      .++++++|+|+|+.+.+++.-++..|+.+++++.|+.+|.+.+.+
T Consensus       124 ~~~~~vlilGAGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~  168 (283)
T COG0169         124 VTGKRVLILGAGGAARAVAFALAEAGAKRITVVNRTRERAEELAD  168 (283)
T ss_pred             cCCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH
Confidence            458999999999999999999999998899999999998776654

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=96.51  E-value=0.009  Score=52.74  Aligned_cols=75  Identities=13%  Similarity=0.035  Sum_probs=51.3

Q ss_pred             CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH-hcCCc-eEEcCCCCChhHHHHHHHHcCCCccEEEEc
Q 018529          169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVT-DFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  246 (354)
Q Consensus       169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~-~lg~~-~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~  246 (354)
                      ++.+++|+|+|++|.+++..+..+|+.+|+++.|+.+|.+.+. +++.. .+.....    . +.+.... ..+|+|++|
T Consensus       124 ~~k~vlvlGaGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~~----~-~~~~~~~-~~~DiVIna  197 (282)
T TIGR01809       124 AGFRGLVIGAGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLEG----D-SGGLAIE-KAAEVLVST  197 (282)
T ss_pred             CCceEEEEcCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceeccc----h-hhhhhcc-cCCCEEEEC
Confidence            5789999999999999999999999889999999988876653 34321 1111110    0 1111111 258999999


Q ss_pred             ccC
Q 018529          247 TGN  249 (354)
Q Consensus       247 ~g~  249 (354)
                      ++.
T Consensus       198 Tp~  200 (282)
T TIGR01809       198 VPA  200 (282)
T ss_pred             CCC
Confidence            875

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=96.51  E-value=0.048  Score=46.43  Aligned_cols=91  Identities=21%  Similarity=0.240  Sum_probs=60.3

Q ss_pred             CCCCeEEEEcCChhHHHHHHHHHHcCCc--EEEEEcCC----hhh--------HHHHHhcCCceEEcCCCCChhHHHHHH
Q 018529          168 ERGSSVAVFGLGAVGLAAAEGARIAGAS--RIIGVDRS----SKR--------FEEAKKFGVTDFVNTSEHDRPIQEVIA  233 (354)
Q Consensus       168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~--~vi~v~~~----~~~--------~~~~~~lg~~~v~~~~~~~~~~~~~i~  233 (354)
                      -.+.+++|+|+|..|...+..+...|.+  +++.++++    .++        .+++++++... .   +.  ++.+.++
T Consensus        23 l~~~rvlvlGAGgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~-~---~~--~l~~~l~   96 (226)
T cd05311          23 IEEVKIVINGAGAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK-T---GG--TLKEALK   96 (226)
T ss_pred             ccCCEEEEECchHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc-c---cC--CHHHHHh
Confidence            4567999999999999999988899997  89999998    443        33455544211 1   11  1434342


Q ss_pred             HHcCCCccEEEEcccChHhH-HHHHHHhhCCCceEEEEc
Q 018529          234 EMTNGGVDRSVECTGNIDNM-ISAFECVHDGWGVAVLVG  271 (354)
Q Consensus       234 ~~~~~~~dvv~d~~g~~~~~-~~~~~~l~~~~g~~v~~g  271 (354)
                           ++|+++++++. ..+ ...++.+.+. ..++.+.
T Consensus        97 -----~~dvlIgaT~~-G~~~~~~l~~m~~~-~ivf~ls  128 (226)
T cd05311          97 -----GADVFIGVSRP-GVVKKEMIKKMAKD-PIVFALA  128 (226)
T ss_pred             -----cCCEEEeCCCC-CCCCHHHHHhhCCC-CEEEEeC
Confidence                 38999999973 333 4566777665 5544443

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=96.50  E-value=0.042  Score=47.59  Aligned_cols=79  Identities=25%  Similarity=0.282  Sum_probs=50.3

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH-h---cCCc-eEE--cCCCCChhHHHHHHHHc--CC
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-K---FGVT-DFV--NTSEHDRPIQEVIAEMT--NG  238 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~-~---lg~~-~v~--~~~~~~~~~~~~i~~~~--~~  238 (354)
                      ++.++||+|+ |.+|...++.+...|+ +|+++++++++.+.+. +   .+.. ..+  |..+. ..+.+.+.+..  .+
T Consensus         3 ~~~~vlItG~sg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~~   80 (258)
T PRK12429          3 KGKVALVTGAASGIGLEIALALAKEGA-KVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDE-EAINAGIDYAVETFG   80 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCH-HHHHHHHHHHHHHcC
Confidence            3578999987 9999999888888899 8999988887655432 2   2332 122  33222 12323233221  13


Q ss_pred             CccEEEEcccC
Q 018529          239 GVDRSVECTGN  249 (354)
Q Consensus       239 ~~dvv~d~~g~  249 (354)
                      ++|++|.++|.
T Consensus        81 ~~d~vi~~a~~   91 (258)
T PRK12429         81 GVDILVNNAGI   91 (258)
T ss_pred             CCCEEEECCCC
Confidence            78999998863

>PRK06180 short chain dehydrogenase; Provisional

Probab=96.49  E-value=0.018  Score=50.67  Aligned_cols=79  Identities=24%  Similarity=0.350  Sum_probs=52.5

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCce--E--EcCCCCChhHHHHHHHHcC--CCcc
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD--F--VNTSEHDRPIQEVIAEMTN--GGVD  241 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~--v--~~~~~~~~~~~~~i~~~~~--~~~d  241 (354)
                      .++++||+|+ |.+|...++.+...|+ +|+++++++++.+.+.+.....  .  .|..+.+ .+.+.++....  +++|
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~-~~~~~~~~~~~~~~~~d   80 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGH-RVVGTVRSEAARADFEALHPDRALARLLDVTDFD-AIDAVVADAEATFGPID   80 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcC-EEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHH-HHHHHHHHHHHHhCCCC
Confidence            3578999987 9999999998888899 8999999988877665532211  1  2333221 22222332221  3689


Q ss_pred             EEEEcccC
Q 018529          242 RSVECTGN  249 (354)
Q Consensus       242 vv~d~~g~  249 (354)
                      ++++++|.
T Consensus        81 ~vv~~ag~   88 (277)
T PRK06180         81 VLVNNAGY   88 (277)
T ss_pred             EEEECCCc
Confidence            99999875

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=96.49  E-value=0.021  Score=49.93  Aligned_cols=70  Identities=23%  Similarity=0.138  Sum_probs=50.7

Q ss_pred             CCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh-cCCceEEcCCCCChhHHHHHHHHcCCCccEEE
Q 018529          166 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSV  244 (354)
Q Consensus       166 ~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~-lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~  244 (354)
                      +...+++++|+|+|+.+.+++..+...|+.+|+++.|+.++.+.+.+ ++..           +.+.+   ....+|+|+
T Consensus       118 ~~~~~~~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~~~-----------~~~~~---~~~~~dlvI  183 (272)
T PRK12550        118 QVPPDLVVALRGSGGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYGYE-----------WRPDL---GGIEADILV  183 (272)
T ss_pred             CCCCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhCCc-----------chhhc---ccccCCEEE
Confidence            44456789999999999999999999999889999999988776543 4321           11011   112589999


Q ss_pred             EcccC
Q 018529          245 ECTGN  249 (354)
Q Consensus       245 d~~g~  249 (354)
                      +|++.
T Consensus       184 NaTp~  188 (272)
T PRK12550        184 NVTPI  188 (272)
T ss_pred             ECCcc
Confidence            99853

>PRK08339 short chain dehydrogenase; Provisional

Probab=96.49  E-value=0.023  Score=49.66  Aligned_cols=79  Identities=19%  Similarity=0.326  Sum_probs=51.7

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh-c----CCc-eE--EcCCCCChhHHHHHHHHc-CC
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-F----GVT-DF--VNTSEHDRPIQEVIAEMT-NG  238 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~-l----g~~-~v--~~~~~~~~~~~~~i~~~~-~~  238 (354)
                      +++++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+.+ +    +.. ..  .|..+.+ +..+.+.+.. .+
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~-~i~~~~~~~~~~g   84 (263)
T PRK08339          7 SGKLAFTTASSKGIGFGVARVLARAGA-DVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKRE-DLERTVKELKNIG   84 (263)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHH-HHHHHHHHHHhhC
Confidence            4788999987 8999999999999999 89999998877654432 2    322 11  2333321 2222233221 24


Q ss_pred             CccEEEEcccC
Q 018529          239 GVDRSVECTGN  249 (354)
Q Consensus       239 ~~dvv~d~~g~  249 (354)
                      ++|++++++|.
T Consensus        85 ~iD~lv~nag~   95 (263)
T PRK08339         85 EPDIFFFSTGG   95 (263)
T ss_pred             CCcEEEECCCC
Confidence            79999998874

>PRK01581 speE spermidine synthase; Validated

Probab=96.47  E-value=0.067  Score=48.42  Aligned_cols=100  Identities=14%  Similarity=0.044  Sum_probs=66.1

Q ss_pred             CCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcC-----------CceEEcCCCCChhHHHHHHHH
Q 018529          167 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG-----------VTDFVNTSEHDRPIQEVIAEM  235 (354)
Q Consensus       167 ~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg-----------~~~v~~~~~~~~~~~~~i~~~  235 (354)
                      ....++|||+|+| .|.++..+++..+..+|++++.+++-.+.++++.           ..++-.. -.  +..+.++. 
T Consensus       148 h~~PkrVLIIGgG-dG~tlrelLk~~~v~~It~VEIDpeVIelAr~~~~L~~~~~~~~~DpRV~vv-i~--Da~~fL~~-  222 (374)
T PRK01581        148 VIDPKRVLILGGG-DGLALREVLKYETVLHVDLVDLDGSMINMARNVPELVSLNKSAFFDNRVNVH-VC--DAKEFLSS-  222 (374)
T ss_pred             CCCCCEEEEECCC-HHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhccccchhccccCCCCceEEE-EC--cHHHHHHh-
Confidence            3445799999976 4667777777766669999999999999988631           1111110 11  14444544 


Q ss_pred             cCCCccEEEEcccC-----------hHhHHHHHHHhhCCCceEEEEcC
Q 018529          236 TNGGVDRSVECTGN-----------IDNMISAFECVHDGWGVAVLVGV  272 (354)
Q Consensus       236 ~~~~~dvv~d~~g~-----------~~~~~~~~~~l~~~~g~~v~~g~  272 (354)
                      ..+.+|+||--...           .+.++.+.+.|+++ |.++....
T Consensus       223 ~~~~YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPg-GV~V~Qs~  269 (374)
T PRK01581        223 PSSLYDVIIIDFPDPATELLSTLYTSELFARIATFLTED-GAFVCQSN  269 (374)
T ss_pred             cCCCccEEEEcCCCccccchhhhhHHHHHHHHHHhcCCC-cEEEEecC
Confidence            33479999754321           24678899999997 99887654

>PLN02476 O-methyltransferase

Probab=96.47  E-value=0.034  Score=48.61  Aligned_cols=106  Identities=21%  Similarity=0.216  Sum_probs=71.6

Q ss_pred             hhcCCCCCCeEEEEcCChhHHHHHHHHHHcCC-cEEEEEcCChhhHHHHHh----cCCceEEcCCCCChhHHHHHHHHc-
Q 018529          163 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMT-  236 (354)
Q Consensus       163 ~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~-~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~~~-  236 (354)
                      ...+..+.++||=+|.+ +|+.++.+|+.++. .+|+.++.+++..+.+++    .|...-+.....+  ..+.+.++. 
T Consensus       112 ~L~~~~~ak~VLEIGT~-tGySal~lA~al~~~G~V~TiE~d~e~~~~Ar~n~~~aGl~~~I~li~Gd--A~e~L~~l~~  188 (278)
T PLN02476        112 MLVQILGAERCIEVGVY-TGYSSLAVALVLPESGCLVACERDSNSLEVAKRYYELAGVSHKVNVKHGL--AAESLKSMIQ  188 (278)
T ss_pred             HHHHhcCCCeEEEecCC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcC--HHHHHHHHHh
Confidence            34566778899999874 47888888887742 289999999998887754    5765333333333  445555442 


Q ss_pred             ---CCCccEEEEcccC---hHhHHHHHHHhhCCCceEEEEcC
Q 018529          237 ---NGGVDRSVECTGN---IDNMISAFECVHDGWGVAVLVGV  272 (354)
Q Consensus       237 ---~~~~dvv~d~~g~---~~~~~~~~~~l~~~~g~~v~~g~  272 (354)
                         .+.||.||--...   ...++.+++.|+++ |.++.=..
T Consensus       189 ~~~~~~FD~VFIDa~K~~Y~~y~e~~l~lL~~G-GvIV~DNv  229 (278)
T PLN02476        189 NGEGSSYDFAFVDADKRMYQDYFELLLQLVRVG-GVIVMDNV  229 (278)
T ss_pred             cccCCCCCEEEECCCHHHHHHHHHHHHHhcCCC-cEEEEecC
Confidence               2479999754433   35688899999997 88775543

>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]

Probab=96.47  E-value=0.025  Score=47.62  Aligned_cols=95  Identities=25%  Similarity=0.283  Sum_probs=63.3

Q ss_pred             CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCc--eEEcCCCCChhHHHHHHHHcCCCccEEEE
Q 018529          168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT--DFVNTSEHDRPIQEVIAEMTNGGVDRSVE  245 (354)
Q Consensus       168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~--~v~~~~~~~~~~~~~i~~~~~~~~dvv~d  245 (354)
                      -+|.+||=+|||+ |.++.-+|+ .|+ .|+++|-+++..+.++.....  .-++|...   ..+.+.+.. +.||+|++
T Consensus        58 l~g~~vLDvGCGg-G~Lse~mAr-~Ga-~VtgiD~se~~I~~Ak~ha~e~gv~i~y~~~---~~edl~~~~-~~FDvV~c  130 (243)
T COG2227          58 LPGLRVLDVGCGG-GILSEPLAR-LGA-SVTGIDASEKPIEVAKLHALESGVNIDYRQA---TVEDLASAG-GQFDVVTC  130 (243)
T ss_pred             CCCCeEEEecCCc-cHhhHHHHH-CCC-eeEEecCChHHHHHHHHhhhhccccccchhh---hHHHHHhcC-CCccEEEE
Confidence            4788999999864 666666665 467 999999999999988742221  12445443   223333321 48999987


Q ss_pred             -----cccCh-HhHHHHHHHhhCCCceEEEE
Q 018529          246 -----CTGNI-DNMISAFECVHDGWGVAVLV  270 (354)
Q Consensus       246 -----~~g~~-~~~~~~~~~l~~~~g~~v~~  270 (354)
                           -+..+ ..+..+.+.++|+ |.+++.
T Consensus       131 mEVlEHv~dp~~~~~~c~~lvkP~-G~lf~S  160 (243)
T COG2227         131 MEVLEHVPDPESFLRACAKLVKPG-GILFLS  160 (243)
T ss_pred             hhHHHccCCHHHHHHHHHHHcCCC-cEEEEe
Confidence                 34443 3677899999997 776543

>PRK04457 spermidine synthase; Provisional

Probab=96.45  E-value=0.042  Score=47.96  Aligned_cols=97  Identities=19%  Similarity=0.143  Sum_probs=66.7

Q ss_pred             CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhc-CC----ceEEcCCCCChhHHHHHHHHcCCCccE
Q 018529          168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF-GV----TDFVNTSEHDRPIQEVIAEMTNGGVDR  242 (354)
Q Consensus       168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~l-g~----~~v~~~~~~~~~~~~~i~~~~~~~~dv  242 (354)
                      .++++||++|+|. |.++..+++.....++++++.+++-.+.+++. +.    +.+-. ...+  ..+.+.+. .+.+|+
T Consensus        65 ~~~~~vL~IG~G~-G~l~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~rv~v-~~~D--a~~~l~~~-~~~yD~  139 (262)
T PRK04457         65 PRPQHILQIGLGG-GSLAKFIYTYLPDTRQTAVEINPQVIAVARNHFELPENGERFEV-IEAD--GAEYIAVH-RHSTDV  139 (262)
T ss_pred             CCCCEEEEECCCH-hHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHcCCCCCCCceEE-EECC--HHHHHHhC-CCCCCE
Confidence            4567899999875 88888888877544999999999999988773 32    12211 1122  44445443 247999


Q ss_pred             EE-EcccC---------hHhHHHHHHHhhCCCceEEEE
Q 018529          243 SV-ECTGN---------IDNMISAFECVHDGWGVAVLV  270 (354)
Q Consensus       243 v~-d~~g~---------~~~~~~~~~~l~~~~g~~v~~  270 (354)
                      |+ |....         .+.++.+.+.|+++ |.++.-
T Consensus       140 I~~D~~~~~~~~~~l~t~efl~~~~~~L~pg-Gvlvin  176 (262)
T PRK04457        140 ILVDGFDGEGIIDALCTQPFFDDCRNALSSD-GIFVVN  176 (262)
T ss_pred             EEEeCCCCCCCccccCcHHHHHHHHHhcCCC-cEEEEE
Confidence            97 43221         36788999999997 998763

>PRK07825 short chain dehydrogenase; Provisional

Probab=96.45  E-value=0.022  Score=50.00  Aligned_cols=78  Identities=24%  Similarity=0.329  Sum_probs=51.6

Q ss_pred             CCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-HhcC-Cce-EEcCCCCChhHHHHHHHHc--CCCccEE
Q 018529          170 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFG-VTD-FVNTSEHDRPIQEVIAEMT--NGGVDRS  243 (354)
Q Consensus       170 ~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~~lg-~~~-v~~~~~~~~~~~~~i~~~~--~~~~dvv  243 (354)
                      +.++||+|+ |++|...++.+...|+ +|+++++++++.+.+ ++++ +.. ..|..+.+ ++.+.+....  .+++|++
T Consensus         5 ~~~ilVtGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~id~l   82 (273)
T PRK07825          5 GKVVAITGGARGIGLATARALAALGA-RVAIGDLDEALAKETAAELGLVVGGPLDVTDPA-SFAAFLDAVEADLGPIDVL   82 (273)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEccCCCHH-HHHHHHHHHHHHcCCCCEE
Confidence            578999987 9999998888888899 788888988876654 3444 222 22333322 2333333322  1478999


Q ss_pred             EEcccC
Q 018529          244 VECTGN  249 (354)
Q Consensus       244 ~d~~g~  249 (354)
                      ++++|.
T Consensus        83 i~~ag~   88 (273)
T PRK07825         83 VNNAGV   88 (273)
T ss_pred             EECCCc
Confidence            999874

>PRK09186 flagellin modification protein A; Provisional

Probab=96.45  E-value=0.057  Score=46.73  Aligned_cols=78  Identities=19%  Similarity=0.437  Sum_probs=50.5

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-Hhc----CCce----EEcCCCCChhHHHHHHHHcC-
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKF----GVTD----FVNTSEHDRPIQEVIAEMTN-  237 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~~l----g~~~----v~~~~~~~~~~~~~i~~~~~-  237 (354)
                      ++.++||+|+ |.+|...+..+...|+ +|+.+.+++++.+.+ +++    +...    ..|..+.+ .+.+.+.+... 
T Consensus         3 ~~k~vlItGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~-~~~~~~~~~~~~   80 (256)
T PRK09186          3 KGKTILITGAGGLIGSALVKAILEAGG-IVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQE-SLEEFLSKSAEK   80 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHH-HHHHHHHHHHHH
Confidence            4688999987 9999999988888999 888888887775543 222    2211    22333322 23333333221 


Q ss_pred             -CCccEEEEccc
Q 018529          238 -GGVDRSVECTG  248 (354)
Q Consensus       238 -~~~dvv~d~~g  248 (354)
                       +++|+++.+++
T Consensus        81 ~~~id~vi~~A~   92 (256)
T PRK09186         81 YGKIDGAVNCAY   92 (256)
T ss_pred             cCCccEEEECCc
Confidence             36899999885

>PRK06398 aldose dehydrogenase; Validated

Probab=96.42  E-value=0.036  Score=48.26  Aligned_cols=74  Identities=20%  Similarity=0.269  Sum_probs=48.0

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCc-eEEcCCCCChhHHHHHHHHc--CCCccEEE
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT-DFVNTSEHDRPIQEVIAEMT--NGGVDRSV  244 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~-~v~~~~~~~~~~~~~i~~~~--~~~~dvv~  244 (354)
                      .++++||+|+ |++|...+..+...|+ +|+.+++++++..     ... ...|..+.. .+.+.+.+..  .+.+|+++
T Consensus         5 ~gk~vlItGas~gIG~~ia~~l~~~G~-~Vi~~~r~~~~~~-----~~~~~~~D~~~~~-~i~~~~~~~~~~~~~id~li   77 (258)
T PRK06398          5 KDKVAIVTGGSQGIGKAVVNRLKEEGS-NVINFDIKEPSYN-----DVDYFKVDVSNKE-QVIKGIDYVISKYGRIDILV   77 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCccccC-----ceEEEEccCCCHH-HHHHHHHHHHHHcCCCCEEE
Confidence            4679999987 9999999999999999 8888888765432     111 112333321 2333333322  13689999


Q ss_pred             EcccC
Q 018529          245 ECTGN  249 (354)
Q Consensus       245 d~~g~  249 (354)
                      +++|.
T Consensus        78 ~~Ag~   82 (258)
T PRK06398         78 NNAGI   82 (258)
T ss_pred             ECCCC
Confidence            98874

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=96.40  E-value=0.054  Score=45.15  Aligned_cols=82  Identities=29%  Similarity=0.306  Sum_probs=56.6

Q ss_pred             CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh-cCCceEEcCCCCChhHHHHHHHHcCCCccEEEEc
Q 018529          168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  246 (354)
Q Consensus       168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~-lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~  246 (354)
                      -.|.+++|.|.|.+|..+++.+...|+ +|++++++.++.+.+.+ +|+. .++..+    +       ....+|+++-|
T Consensus        26 l~gk~v~I~G~G~vG~~~A~~L~~~G~-~Vvv~D~~~~~~~~~~~~~g~~-~v~~~~----l-------~~~~~Dv~vp~   92 (200)
T cd01075          26 LEGKTVAVQGLGKVGYKLAEHLLEEGA-KLIVADINEEAVARAAELFGAT-VVAPEE----I-------YSVDADVFAPC   92 (200)
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHcCCE-EEcchh----h-------ccccCCEEEec
Confidence            357899999999999999999999999 89999999888776644 4653 222211    1       11158898866


Q ss_pred             ccChHhHHHHHHHhhC
Q 018529          247 TGNIDNMISAFECVHD  262 (354)
Q Consensus       247 ~g~~~~~~~~~~~l~~  262 (354)
                      +.....-...++.++.
T Consensus        93 A~~~~I~~~~~~~l~~  108 (200)
T cd01075          93 ALGGVINDDTIPQLKA  108 (200)
T ss_pred             ccccccCHHHHHHcCC
Confidence            5443444455566644

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PRK05867 short chain dehydrogenase; Provisional

Probab=96.40  E-value=0.02  Score=49.56  Aligned_cols=79  Identities=23%  Similarity=0.297  Sum_probs=51.4

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCce-E--EcCCCCChhHHHHHHHHc--CC
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD-F--VNTSEHDRPIQEVIAEMT--NG  238 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~~-v--~~~~~~~~~~~~~i~~~~--~~  238 (354)
                      .++++||+|+ |++|...+..+...|+ +|+.++++.++.+.+.+    .+... .  .|..+.+ .+.+.+.+..  .+
T Consensus         8 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~g   85 (253)
T PRK05867          8 HGKRALITGASTGIGKRVALAYVEAGA-QVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQ-QVTSMLDQVTAELG   85 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHH-HHHHHHHHHHHHhC
Confidence            4789999987 9999999999889999 89999888877654422    23221 1  2333221 2323233221  14


Q ss_pred             CccEEEEcccC
Q 018529          239 GVDRSVECTGN  249 (354)
Q Consensus       239 ~~dvv~d~~g~  249 (354)
                      ++|+++++.|.
T Consensus        86 ~id~lv~~ag~   96 (253)
T PRK05867         86 GIDIAVCNAGI   96 (253)
T ss_pred             CCCEEEECCCC
Confidence            79999998874

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=96.39  E-value=0.085  Score=45.15  Aligned_cols=79  Identities=22%  Similarity=0.287  Sum_probs=51.0

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH----HhcCCceE---EcCCCCChhHHHHHHHHc--CC
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTDF---VNTSEHDRPIQEVIAEMT--NG  238 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~----~~lg~~~v---~~~~~~~~~~~~~i~~~~--~~  238 (354)
                      ++.++||+|+ |.+|...++.+...|. .|+++.+++++.+.+    ++.+....   .|..+. ..+.+.+.+..  .+
T Consensus         4 ~~~~ilItGasg~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~   81 (246)
T PRK05653          4 QGKTALVTGASRGIGRAIALRLAADGA-KVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDE-AAVRALIEAAVEAFG   81 (246)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCH-HHHHHHHHHHHHHhC
Confidence            3568999997 9999999988888899 799999988775443    23343222   233222 12333333321  13


Q ss_pred             CccEEEEcccC
Q 018529          239 GVDRSVECTGN  249 (354)
Q Consensus       239 ~~dvv~d~~g~  249 (354)
                      .+|.++.++|.
T Consensus        82 ~id~vi~~ag~   92 (246)
T PRK05653         82 ALDILVNNAGI   92 (246)
T ss_pred             CCCEEEECCCc
Confidence            68999998864

>PRK07774 short chain dehydrogenase; Provisional

Probab=96.37  E-value=0.024  Score=48.87  Aligned_cols=79  Identities=25%  Similarity=0.282  Sum_probs=49.5

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH-h---cCCc-e--EEcCCCCChhHHHHHHHHc--CC
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-K---FGVT-D--FVNTSEHDRPIQEVIAEMT--NG  238 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~-~---lg~~-~--v~~~~~~~~~~~~~i~~~~--~~  238 (354)
                      .+.++||+|+ |.+|...++.+...|+ +|+.+++++++.+.+. +   .+.. .  ..|..+.. .+.+.+++..  .+
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~~   82 (250)
T PRK07774          5 DDKVAIVTGAAGGIGQAYAEALAREGA-SVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPD-SAKAMADATVSAFG   82 (250)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHH-HHHHHHHHHHHHhC
Confidence            4678999987 9999999988888898 8999988876654332 2   2221 1  12332221 1222222221  13


Q ss_pred             CccEEEEcccC
Q 018529          239 GVDRSVECTGN  249 (354)
Q Consensus       239 ~~dvv~d~~g~  249 (354)
                      ++|+||.++|.
T Consensus        83 ~id~vi~~ag~   93 (250)
T PRK07774         83 GIDYLVNNAAI   93 (250)
T ss_pred             CCCEEEECCCC
Confidence            68999999884

>PRK11207 tellurite resistance protein TehB; Provisional

Probab=96.36  E-value=0.011  Score=49.23  Aligned_cols=98  Identities=16%  Similarity=0.239  Sum_probs=62.9

Q ss_pred             hhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCceEEcCCCCChhHHHHHHHHc-C
Q 018529          163 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMT-N  237 (354)
Q Consensus       163 ~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~~~-~  237 (354)
                      +.....++.+||-+|+|. |..+..+|+. |. +|++++.+++..+.+++    .+...+. ....+  +.    +.. .
T Consensus        24 ~~l~~~~~~~vLDiGcG~-G~~a~~La~~-g~-~V~gvD~S~~~i~~a~~~~~~~~~~~v~-~~~~d--~~----~~~~~   93 (197)
T PRK11207         24 EAVKVVKPGKTLDLGCGN-GRNSLYLAAN-GF-DVTAWDKNPMSIANLERIKAAENLDNLH-TAVVD--LN----NLTFD   93 (197)
T ss_pred             HhcccCCCCcEEEECCCC-CHHHHHHHHC-CC-EEEEEeCCHHHHHHHHHHHHHcCCCcce-EEecC--hh----hCCcC
Confidence            344556778999999875 7778888875 77 99999999987776654    2322111 11111  11    111 2


Q ss_pred             CCccEEEEccc----C----hHhHHHHHHHhhCCCceEEEEc
Q 018529          238 GGVDRSVECTG----N----IDNMISAFECVHDGWGVAVLVG  271 (354)
Q Consensus       238 ~~~dvv~d~~g----~----~~~~~~~~~~l~~~~g~~v~~g  271 (354)
                      +.+|+|+....    .    ...+..+.+.|+++ |.++++.
T Consensus        94 ~~fD~I~~~~~~~~~~~~~~~~~l~~i~~~Lkpg-G~~~~~~  134 (197)
T PRK11207         94 GEYDFILSTVVLMFLEAKTIPGLIANMQRCTKPG-GYNLIVA  134 (197)
T ss_pred             CCcCEEEEecchhhCCHHHHHHHHHHHHHHcCCC-cEEEEEE
Confidence            37999987533    1    24677888899997 9865544

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=96.35  E-value=0.037  Score=51.38  Aligned_cols=90  Identities=27%  Similarity=0.364  Sum_probs=57.1

Q ss_pred             EEEEcCChhHHHHHHHHHHcCCc-EEEEEcCChhhHHHHHh--cCC--ce-EEcCCCCChhHHHHHHHHcCCCccEEEEc
Q 018529          173 VAVFGLGAVGLAAAEGARIAGAS-RIIGVDRSSKRFEEAKK--FGV--TD-FVNTSEHDRPIQEVIAEMTNGGVDRSVEC  246 (354)
Q Consensus       173 vlI~G~g~~G~~a~~~a~~~g~~-~vi~v~~~~~~~~~~~~--lg~--~~-v~~~~~~~~~~~~~i~~~~~~~~dvv~d~  246 (354)
                      |+|+|+|.+|..+++.+...+.. +|++.+++.++.+.+.+  .+.  .. .++..+    . +.+.++.. +.|+|++|
T Consensus         1 IlvlG~G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~----~-~~l~~~~~-~~dvVin~   74 (386)
T PF03435_consen    1 ILVLGAGRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVND----P-ESLAELLR-GCDVVINC   74 (386)
T ss_dssp             EEEE--SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTT----H-HHHHHHHT-TSSEEEE-
T ss_pred             CEEEcCcHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCC----H-HHHHHHHh-cCCEEEEC
Confidence            68899999999999998887754 89999999999777654  222  21 233322    2 22444433 46999999


Q ss_pred             ccChHhHHHHHHHhhCCCceEEE
Q 018529          247 TGNIDNMISAFECVHDGWGVAVL  269 (354)
Q Consensus       247 ~g~~~~~~~~~~~l~~~~g~~v~  269 (354)
                      +|.......+..|+..+ -.++.
T Consensus        75 ~gp~~~~~v~~~~i~~g-~~yvD   96 (386)
T PF03435_consen   75 AGPFFGEPVARACIEAG-VHYVD   96 (386)
T ss_dssp             SSGGGHHHHHHHHHHHT--EEEE
T ss_pred             CccchhHHHHHHHHHhC-CCeec
Confidence            98754455555667665 56665

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PRK06196 oxidoreductase; Provisional

Probab=96.35  E-value=0.029  Score=50.41  Aligned_cols=79  Identities=19%  Similarity=0.280  Sum_probs=51.2

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-HhcC-Cce-EEcCCCCChhHHHHHHHHcC--CCccE
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFG-VTD-FVNTSEHDRPIQEVIAEMTN--GGVDR  242 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~~lg-~~~-v~~~~~~~~~~~~~i~~~~~--~~~dv  242 (354)
                      .+.++||+|+ |++|...+..+...|+ +|++++++.++.+.+ .++. +.. ..|..+. ..+.+.+.+...  +++|+
T Consensus        25 ~~k~vlITGasggIG~~~a~~L~~~G~-~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~-~~v~~~~~~~~~~~~~iD~  102 (315)
T PRK06196         25 SGKTAIVTGGYSGLGLETTRALAQAGA-HVIVPARRPDVAREALAGIDGVEVVMLDLADL-ESVRAFAERFLDSGRRIDI  102 (315)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhhCeEEEccCCCH-HHHHHHHHHHHhcCCCCCE
Confidence            4678999987 9999998888888899 888888888765543 3332 211 1233322 123333333322  47999


Q ss_pred             EEEcccC
Q 018529          243 SVECTGN  249 (354)
Q Consensus       243 v~d~~g~  249 (354)
                      +++++|.
T Consensus       103 li~nAg~  109 (315)
T PRK06196        103 LINNAGV  109 (315)
T ss_pred             EEECCCC
Confidence            9998873

>PRK09072 short chain dehydrogenase; Provisional

Probab=96.35  E-value=0.03  Score=48.78  Aligned_cols=78  Identities=24%  Similarity=0.400  Sum_probs=50.3

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh-c--CCc-eEE--cCCCCC--hhHHHHHHHHcCCC
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-F--GVT-DFV--NTSEHD--RPIQEVIAEMTNGG  239 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~-l--g~~-~v~--~~~~~~--~~~~~~i~~~~~~~  239 (354)
                      ++.++||+|+ |.+|...+..+...|+ .|+++++++++.+.+.+ +  +.. ..+  |..+.+  ..+.+.+.+  .+.
T Consensus         4 ~~~~vlItG~s~~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~--~~~   80 (263)
T PRK09072          4 KDKRVLLTGASGGIGQALAEALAAAGA-RLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARARE--MGG   80 (263)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHh--cCC
Confidence            4678999987 9999998888888899 89999998877655432 2  211 122  222211  112222222  247


Q ss_pred             ccEEEEcccC
Q 018529          240 VDRSVECTGN  249 (354)
Q Consensus       240 ~dvv~d~~g~  249 (354)
                      +|+++.++|.
T Consensus        81 id~lv~~ag~   90 (263)
T PRK09072         81 INVLINNAGV   90 (263)
T ss_pred             CCEEEECCCC
Confidence            8999999875

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.34  E-value=0.028  Score=48.47  Aligned_cols=79  Identities=20%  Similarity=0.335  Sum_probs=51.5

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH----HhcCCce-E--EcCCCCChhHHHHHHHHcC--C
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-F--VNTSEHDRPIQEVIAEMTN--G  238 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~----~~lg~~~-v--~~~~~~~~~~~~~i~~~~~--~  238 (354)
                      +++++||+|+ |++|...++.+...|+ +|+.+++++++.+.+    ++.+... .  .|..+. ..+.+.++....  +
T Consensus         4 ~~~~~lItG~~g~iG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~   81 (253)
T PRK08217          4 KDKVIVITGGAQGLGRAMAEYLAQKGA-KLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDE-EDVEATFAQIAEDFG   81 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCH-HHHHHHHHHHHHHcC
Confidence            4789999987 9999999999998999 899999988765543    2234331 1  222221 123233333221  3


Q ss_pred             CccEEEEcccC
Q 018529          239 GVDRSVECTGN  249 (354)
Q Consensus       239 ~~dvv~d~~g~  249 (354)
                      ++|++|+++|.
T Consensus        82 ~id~vi~~ag~   92 (253)
T PRK08217         82 QLNGLINNAGI   92 (253)
T ss_pred             CCCEEEECCCc
Confidence            68999998873

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=96.34  E-value=0.034  Score=47.89  Aligned_cols=79  Identities=25%  Similarity=0.350  Sum_probs=50.2

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChh--hHHHHHhcCCce-E--EcCCCCChhHHHHHHHHcC--CCc
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSK--RFEEAKKFGVTD-F--VNTSEHDRPIQEVIAEMTN--GGV  240 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~--~~~~~~~lg~~~-v--~~~~~~~~~~~~~i~~~~~--~~~  240 (354)
                      .++++||+|+ |.+|...+..+...|+ +|+.+++++.  ..+.+++++... .  .|..+. ..+.+.+++...  +++
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~~   81 (248)
T TIGR01832         4 EGKVALVTGANTGLGQGIAVGLAEAGA-DIVGAGRSEPSETQQQVEALGRRFLSLTADLSDI-EAIKALVDSAVEEFGHI   81 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHhcCCceEEEECCCCCH-HHHHHHHHHHHHHcCCC
Confidence            4789999997 9999998888888999 8888887652  233344455321 2  233222 123333333221  369


Q ss_pred             cEEEEcccC
Q 018529          241 DRSVECTGN  249 (354)
Q Consensus       241 dvv~d~~g~  249 (354)
                      |++++++|.
T Consensus        82 d~li~~ag~   90 (248)
T TIGR01832        82 DILVNNAGI   90 (248)
T ss_pred             CEEEECCCC
Confidence            999998874

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK06128 oxidoreductase; Provisional

Probab=96.34  E-value=0.072  Score=47.49  Aligned_cols=79  Identities=18%  Similarity=0.203  Sum_probs=47.3

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChh--h----HHHHHhcCCceE---EcCCCCChhHHHHHHHHc--
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSK--R----FEEAKKFGVTDF---VNTSEHDRPIQEVIAEMT--  236 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~--~----~~~~~~lg~~~v---~~~~~~~~~~~~~i~~~~--  236 (354)
                      .++++||+|+ |.+|...+..+...|+ +|+.+.++.+  +    .+.+++.|....   .|..+. ..+.+.+.+..  
T Consensus        54 ~~k~vlITGas~gIG~~~a~~l~~~G~-~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~  131 (300)
T PRK06128         54 QGRKALITGADSGIGRATAIAFAREGA-DIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDE-AFCRQLVERAVKE  131 (300)
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHcCC-EEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCH-HHHHHHHHHHHHH
Confidence            4689999987 9999998888888899 7776655432  1    223334454322   223221 12222232221  


Q ss_pred             CCCccEEEEcccC
Q 018529          237 NGGVDRSVECTGN  249 (354)
Q Consensus       237 ~~~~dvv~d~~g~  249 (354)
                      .+++|++++++|.
T Consensus       132 ~g~iD~lV~nAg~  144 (300)
T PRK06128        132 LGGLDILVNIAGK  144 (300)
T ss_pred             hCCCCEEEECCcc
Confidence            1379999998874

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.33  E-value=0.012  Score=55.89  Aligned_cols=94  Identities=11%  Similarity=0.105  Sum_probs=62.7

Q ss_pred             hhcCCCCCCeEE----EEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCc-eEEcCCCCChhHHHHHHHHc
Q 018529          163 NVAKPERGSSVA----VFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT-DFVNTSEHDRPIQEVIAEMT  236 (354)
Q Consensus       163 ~~~~~~~~~~vl----I~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~-~v~~~~~~~~~~~~~i~~~~  236 (354)
                      ...++++|+.+|    |+|+ |++|.+++|+++..|+ .|+++.+.+.+....+..+.. .+++.....  +.+.+....
T Consensus        27 ~l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~d~~~~~--~~~~l~~~~  103 (450)
T PRK08261         27 PLRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGY-DVVANNDGGLTWAAGWGDRFGALVFDATGIT--DPADLKALY  103 (450)
T ss_pred             cccCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCC-eeeecCccccccccCcCCcccEEEEECCCCC--CHHHHHHHH
Confidence            467788999988    8865 9999999999999999 888886666544444444444 344444332  333333221


Q ss_pred             CCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCC
Q 018529          237 NGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS  274 (354)
Q Consensus       237 ~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~  274 (354)
                                    ..+...++.|.++ |+++.++...
T Consensus       104 --------------~~~~~~l~~l~~~-griv~i~s~~  126 (450)
T PRK08261        104 --------------EFFHPVLRSLAPC-GRVVVLGRPP  126 (450)
T ss_pred             --------------HHHHHHHHhccCC-CEEEEEcccc
Confidence                          3555667777776 8888877653

>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed

Probab=96.32  E-value=0.017  Score=57.52  Aligned_cols=76  Identities=24%  Similarity=0.292  Sum_probs=53.1

Q ss_pred             CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChh---------------------hHHHHHhcCCceEEcCCCC-C
Q 018529          168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK---------------------RFEEAKKFGVTDFVNTSEH-D  225 (354)
Q Consensus       168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~---------------------~~~~~~~lg~~~v~~~~~~-~  225 (354)
                      ..+++|+|+|+|+.|+.++..+...|+ +|+++++.+.                     ..++++++|++...+..-. +
T Consensus       325 ~~~~~VaIIGaGpAGLsaA~~L~~~G~-~V~V~E~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~  403 (654)
T PRK12769        325 KSDKRVAIIGAGPAGLACADVLARNGV-AVTVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIFSAMGIEFELNCEVGKD  403 (654)
T ss_pred             cCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCceeeecCCCccCCHHHHHHHHHHHHHCCeEEECCCEeCCc
Confidence            468899999999999999999999999 7888876542                     3556677887644433211 1


Q ss_pred             hhHHHHHHHHcCCCccEEEEcccC
Q 018529          226 RPIQEVIAEMTNGGVDRSVECTGN  249 (354)
Q Consensus       226 ~~~~~~i~~~~~~~~dvv~d~~g~  249 (354)
                      -.+. .+.    ..+|.||.++|.
T Consensus       404 i~~~-~~~----~~~DavilAtGa  422 (654)
T PRK12769        404 ISLE-SLL----EDYDAVFVGVGT  422 (654)
T ss_pred             CCHH-HHH----hcCCEEEEeCCC
Confidence            0121 111    269999999886

>PRK06841 short chain dehydrogenase; Provisional

Probab=96.31  E-value=0.022  Score=49.34  Aligned_cols=79  Identities=27%  Similarity=0.310  Sum_probs=51.2

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCce--E--EcCCCCChhHHHHHHHHcC--CCcc
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD--F--VNTSEHDRPIQEVIAEMTN--GGVD  241 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~--v--~~~~~~~~~~~~~i~~~~~--~~~d  241 (354)
                      ++.++||+|+ |.+|...++.+...|+ +|+.++++.+..+...++....  .  .|..+. .++.+.+.+...  +++|
T Consensus        14 ~~k~vlItGas~~IG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~~~~d   91 (255)
T PRK06841         14 SGKVAVVTGGASGIGHAIAELFAAKGA-RVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDS-QSVEAAVAAVISAFGRID   91 (255)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhhCCceEEEEecCCCH-HHHHHHHHHHHHHhCCCC
Confidence            4679999997 9999998888888999 8999988877655555442211  2  233221 122222222211  3689


Q ss_pred             EEEEcccC
Q 018529          242 RSVECTGN  249 (354)
Q Consensus       242 vv~d~~g~  249 (354)
                      +++.++|.
T Consensus        92 ~vi~~ag~   99 (255)
T PRK06841         92 ILVNSAGV   99 (255)
T ss_pred             EEEECCCC
Confidence            99999874

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=96.30  E-value=0.054  Score=44.94  Aligned_cols=76  Identities=29%  Similarity=0.305  Sum_probs=49.4

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh-c----CCceE-EcCCCCChhHHHHHHHHcCCCcc
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-F----GVTDF-VNTSEHDRPIQEVIAEMTNGGVD  241 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~-l----g~~~v-~~~~~~~~~~~~~i~~~~~~~~d  241 (354)
                      ++.+++|+|+ |.+|...+..+...|. +|+.+.++.++.+.+.+ +    +.... .+..+. .++.+.+     .++|
T Consensus        27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~-~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~-~~~~~~~-----~~~d   99 (194)
T cd01078          27 KGKTAVVLGGTGPVGQRAAVLLAREGA-RVVLVGRDLERAQKAADSLRARFGEGVGAVETSDD-AARAAAI-----KGAD   99 (194)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCH-HHHHHHH-----hcCC
Confidence            5689999997 9999988888888887 88888898887665432 2    33211 112211 1122222     2589


Q ss_pred             EEEEcccChH
Q 018529          242 RSVECTGNID  251 (354)
Q Consensus       242 vv~d~~g~~~  251 (354)
                      +||.+++...
T Consensus       100 iVi~at~~g~  109 (194)
T cd01078         100 VVFAAGAAGV  109 (194)
T ss_pred             EEEECCCCCc
Confidence            9999887643

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PRK09291 short chain dehydrogenase; Provisional

Probab=96.29  E-value=0.03  Score=48.51  Aligned_cols=74  Identities=14%  Similarity=0.139  Sum_probs=49.7

Q ss_pred             CCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCce-E--EcCCCCChhHHHHHHHHcCCCcc
Q 018529          170 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD-F--VNTSEHDRPIQEVIAEMTNGGVD  241 (354)
Q Consensus       170 ~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~~-v--~~~~~~~~~~~~~i~~~~~~~~d  241 (354)
                      +.++||+|+ |.+|...++.+...|+ +|+++.++.++.+.+++    .+... +  .|..+.     +.+.+...+++|
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~~~~~~~id   75 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGH-NVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDA-----IDRAQAAEWDVD   75 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCH-----HHHHHHhcCCCC
Confidence            457999987 9999999999999999 88888888766554432    23221 1  233221     223333334799


Q ss_pred             EEEEcccC
Q 018529          242 RSVECTGN  249 (354)
Q Consensus       242 vv~d~~g~  249 (354)
                      ++|.++|.
T Consensus        76 ~vi~~ag~   83 (257)
T PRK09291         76 VLLNNAGI   83 (257)
T ss_pred             EEEECCCc
Confidence            99998873

>COG3288 PntA NAD/NADP transhydrogenase alpha subunit [Energy production and conversion]

Probab=96.28  E-value=0.029  Score=48.74  Aligned_cols=130  Identities=21%  Similarity=0.162  Sum_probs=85.1

Q ss_pred             hcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCC---------ChhHHHHHHH
Q 018529          164 VAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEH---------DRPIQEVIAE  234 (354)
Q Consensus       164 ~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~---------~~~~~~~i~~  234 (354)
                      .++--++.++++.|.|..|+.++..++..|+ .|..-+-...+.+..+++|+...-..+++         +++|.+.-.+
T Consensus       158 Aagtv~pA~vlv~G~Gvagl~aiata~~lG~-iVt~rdlrm~~Keqv~s~Ga~f~~~~~ee~~gGYAk~ms~~~~~~q~~  236 (356)
T COG3288         158 AAGTVSPAKVLVIGAGVAGLAAIATAVRLGA-IVTARDLRMFKKEQVESLGAKFLAVEDEESAGGYAKEMSEEFIAKQAE  236 (356)
T ss_pred             hcccccchhhhhhhHHHHHHHHHHHHhhcce-EEehhhhhhHHhhhhhhcccccccccccccCCCccccCCHHHHHHHHH
Confidence            3445667888999999999999999999999 88888777888888888887533211111         1233332222


Q ss_pred             Hc-C--CCccEEEEcccCh-----H-hHHHHHHHhhCCCceEEEEcCCCCCceeecc-hhhh--ccccEEEEEe
Q 018529          235 MT-N--GGVDRSVECTGNI-----D-NMISAFECVHDGWGVAVLVGVPSKDAVFMTK-PINV--LNERTLKGTF  296 (354)
Q Consensus       235 ~~-~--~~~dvv~d~~g~~-----~-~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~-~~~~--~~~~~i~g~~  296 (354)
                      +. .  .++|+||.+.=.|     . ..+.....++++ +.+|.+....++ ....+ +-..  .+.+++.|..
T Consensus       237 ~~a~~~~~~DivITTAlIPGrpAP~Lvt~~mv~sMkpG-SViVDlAa~~GG-Nce~t~pg~~v~~~gV~iig~~  308 (356)
T COG3288         237 LVAEQAKEVDIVITTALIPGRPAPKLVTAEMVASMKPG-SVIVDLAAETGG-NCELTEPGKVVTKNGVKIIGYT  308 (356)
T ss_pred             HHHHHhcCCCEEEEecccCCCCCchhhHHHHHHhcCCC-cEEEEehhhcCC-CcccccCCeEEEeCCeEEEeec
Confidence            22 2  2799999875322     2 356788899997 999988765433 22222 1122  2677888854

>PRK08703 short chain dehydrogenase; Provisional

Probab=96.28  E-value=0.043  Score=47.04  Aligned_cols=80  Identities=28%  Similarity=0.375  Sum_probs=51.9

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH----hcCC-c---eEEcCCCCC----hhHHHHHHHH
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGV-T---DFVNTSEHD----RPIQEVIAEM  235 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~----~lg~-~---~v~~~~~~~----~~~~~~i~~~  235 (354)
                      ++.+++|+|+ |.+|...++.+...|+ +|+++++++++.+.+.    +.+. .   ...|..+.+    ..+.+.+.+.
T Consensus         5 ~~k~vlItG~sggiG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~   83 (239)
T PRK08703          5 SDKTILVTGASQGLGEQVAKAYAAAGA-TVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEA   83 (239)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHH
Confidence            4578999987 9999999988888899 8999999887665432    2221 1   113332211    1233344444


Q ss_pred             cCCCccEEEEcccC
Q 018529          236 TNGGVDRSVECTGN  249 (354)
Q Consensus       236 ~~~~~dvv~d~~g~  249 (354)
                      ..+.+|+++.++|.
T Consensus        84 ~~~~id~vi~~ag~   97 (239)
T PRK08703         84 TQGKLDGIVHCAGY   97 (239)
T ss_pred             hCCCCCEEEEeccc
Confidence            33478999999884

>PRK05866 short chain dehydrogenase; Provisional

Probab=96.27  E-value=0.032  Score=49.58  Aligned_cols=79  Identities=24%  Similarity=0.393  Sum_probs=51.1

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCce-E--EcCCCCChhHHHHHHHHc--CC
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD-F--VNTSEHDRPIQEVIAEMT--NG  238 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~~-v--~~~~~~~~~~~~~i~~~~--~~  238 (354)
                      .+.++||+|+ |++|...++.+...|+ +|++++++.++.+.+.+    .+... .  .|..+. ..+.+.++...  .+
T Consensus        39 ~~k~vlItGasggIG~~la~~La~~G~-~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~-~~v~~~~~~~~~~~g  116 (293)
T PRK05866         39 TGKRILLTGASSGIGEAAAEQFARRGA-TVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDL-DAVDALVADVEKRIG  116 (293)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCH-HHHHHHHHHHHHHcC
Confidence            3578999987 9999998888888898 89999998877654422    33321 2  222222 12323333221  23


Q ss_pred             CccEEEEcccC
Q 018529          239 GVDRSVECTGN  249 (354)
Q Consensus       239 ~~dvv~d~~g~  249 (354)
                      ++|++++++|.
T Consensus       117 ~id~li~~AG~  127 (293)
T PRK05866        117 GVDILINNAGR  127 (293)
T ss_pred             CCCEEEECCCC
Confidence            78999999874

>PRK06484 short chain dehydrogenase; Validated

Probab=96.26  E-value=0.072  Score=51.51  Aligned_cols=80  Identities=23%  Similarity=0.355  Sum_probs=54.1

Q ss_pred             CCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh-cCCce---EEcCCCCChhHHHHHHHHcC--CCc
Q 018529          168 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTD---FVNTSEHDRPIQEVIAEMTN--GGV  240 (354)
Q Consensus       168 ~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~-lg~~~---v~~~~~~~~~~~~~i~~~~~--~~~  240 (354)
                      ..++++||+|+ +++|...++.+...|+ +|+.+++++++.+.+.+ ++...   ..|..+.+ .+.+.+.+...  +.+
T Consensus       267 ~~~k~~lItGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~g~i  344 (520)
T PRK06484        267 ESPRVVAITGGARGIGRAVADRFAAAGD-RLLIIDRDAEGAKKLAEALGDEHLSVQADITDEA-AVESAFAQIQARWGRL  344 (520)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHH-HHHHHHHHHHHHcCCC
Confidence            45789999987 9999999998888999 89999998887766544 44332   12333321 23333333221  469


Q ss_pred             cEEEEcccC
Q 018529          241 DRSVECTGN  249 (354)
Q Consensus       241 dvv~d~~g~  249 (354)
                      |++++++|.
T Consensus       345 d~li~nAg~  353 (520)
T PRK06484        345 DVLVNNAGI  353 (520)
T ss_pred             CEEEECCCC
Confidence            999998874

>PRK07502 cyclohexadienyl dehydrogenase; Validated

Probab=96.25  E-value=0.047  Score=48.93  Aligned_cols=91  Identities=26%  Similarity=0.428  Sum_probs=60.6

Q ss_pred             CeEEEEcCChhHHHHHHHHHHcCC-cEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcccC
Q 018529          171 SSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN  249 (354)
Q Consensus       171 ~~vlI~G~g~~G~~a~~~a~~~g~-~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~  249 (354)
                      .+|.|+|+|.+|...+..++..|. ..|+++++++++.+.+++.|...... .  +  ..+.+     ..+|+|+.|++.
T Consensus         7 ~~I~IIG~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~~~-~--~--~~~~~-----~~aDvViiavp~   76 (307)
T PRK07502          7 DRVALIGIGLIGSSLARAIRRLGLAGEIVGADRSAETRARARELGLGDRVT-T--S--AAEAV-----KGADLVILCVPV   76 (307)
T ss_pred             cEEEEEeeCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCCceec-C--C--HHHHh-----cCCCEEEECCCH
Confidence            579999999999998888888874 37999999999998888887532111 1  1  21212     258999999976


Q ss_pred             hHh---HHHHHHHhhCCCceEEEEcC
Q 018529          250 IDN---MISAFECVHDGWGVAVLVGV  272 (354)
Q Consensus       250 ~~~---~~~~~~~l~~~~g~~v~~g~  272 (354)
                      ...   ++.....++++ ..++.++.
T Consensus        77 ~~~~~v~~~l~~~l~~~-~iv~dvgs  101 (307)
T PRK07502         77 GASGAVAAEIAPHLKPG-AIVTDVGS  101 (307)
T ss_pred             HHHHHHHHHHHhhCCCC-CEEEeCcc
Confidence            322   23333445554 55555544

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.24  E-value=0.05  Score=47.66  Aligned_cols=95  Identities=20%  Similarity=0.250  Sum_probs=65.0

Q ss_pred             hcccchhhhhhhhhhhcC-CCCCCeEEEEcCCh-hHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCCh
Q 018529          149 ILSCGVSTGLGATLNVAK-PERGSSVAVFGLGA-VGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDR  226 (354)
Q Consensus       149 ~l~~~~~~a~~~l~~~~~-~~~~~~vlI~G~g~-~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~  226 (354)
                      .+||+....+.. .+..+ --.|.+++|+|.|. +|.-.+.++...|+ .|+.+.+...                     
T Consensus       137 ~~PcTp~ai~~l-l~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~ga-tVtv~~s~t~---------------------  193 (286)
T PRK14175        137 FVPCTPLGIMEI-LKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNA-SVTILHSRSK---------------------  193 (286)
T ss_pred             CCCCcHHHHHHH-HHHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCC-eEEEEeCCch---------------------
Confidence            456554444443 34444 34789999999865 99999999999999 8887754321                     


Q ss_pred             hHHHHHHHHcCCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCC
Q 018529          227 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS  274 (354)
Q Consensus       227 ~~~~~i~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~  274 (354)
                      ++.+.++     .+|+||.++|.+..+..  +.++++ ..++.+|...
T Consensus       194 ~l~~~~~-----~ADIVIsAvg~p~~i~~--~~vk~g-avVIDvGi~~  233 (286)
T PRK14175        194 DMASYLK-----DADVIVSAVGKPGLVTK--DVVKEG-AVIIDVGNTP  233 (286)
T ss_pred             hHHHHHh-----hCCEEEECCCCCcccCH--HHcCCC-cEEEEcCCCc
Confidence            1323232     37999999999766655  357886 7788887654

>PRK08263 short chain dehydrogenase; Provisional

Probab=96.23  E-value=0.069  Score=46.90  Aligned_cols=78  Identities=17%  Similarity=0.250  Sum_probs=50.0

Q ss_pred             CCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh-cCCc-eEE--cCCCCChhHHHHHHHHc--CCCccE
Q 018529          170 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVT-DFV--NTSEHDRPIQEVIAEMT--NGGVDR  242 (354)
Q Consensus       170 ~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~-lg~~-~v~--~~~~~~~~~~~~i~~~~--~~~~dv  242 (354)
                      +.++||+|+ |.+|...++.+...|. +|+.++++.++.+.+.+ ++.. ..+  |..+. ..+.+.+....  .+++|+
T Consensus         3 ~k~vlItGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~~d~   80 (275)
T PRK08263          3 EKVWFITGASRGFGRAWTEAALERGD-RVVATARDTATLADLAEKYGDRLLPLALDVTDR-AAVFAAVETAVEHFGRLDI   80 (275)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhccCCeeEEEccCCCH-HHHHHHHHHHHHHcCCCCE
Confidence            468999987 9999998888888898 89999898877665543 2221 122  22221 12222222221  137899


Q ss_pred             EEEcccC
Q 018529          243 SVECTGN  249 (354)
Q Consensus       243 v~d~~g~  249 (354)
                      ++.++|.
T Consensus        81 vi~~ag~   87 (275)
T PRK08263         81 VVNNAGY   87 (275)
T ss_pred             EEECCCC
Confidence            9999874

>TIGR00138 gidB 16S rRNA methyltransferase GidB

Probab=96.23  E-value=0.035  Score=45.50  Aligned_cols=94  Identities=13%  Similarity=0.137  Sum_probs=59.0

Q ss_pred             CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH----hcCCceEEcCCCCChhHHHHHHHHcCCCccEEE
Q 018529          169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSV  244 (354)
Q Consensus       169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~----~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~  244 (354)
                      ++++||=+|+|. |.+++.+++.....+|++++.+++..+.++    +.+.+.+- +...+  ..+ +  ...+.+|+|+
T Consensus        42 ~~~~vLDiGcGt-G~~s~~la~~~~~~~V~~iD~s~~~~~~a~~~~~~~~~~~i~-~i~~d--~~~-~--~~~~~fD~I~  114 (181)
T TIGR00138        42 DGKKVIDIGSGA-GFPGIPLAIARPELKLTLLESNHKKVAFLREVKAELGLNNVE-IVNGR--AED-F--QHEEQFDVIT  114 (181)
T ss_pred             CCCeEEEecCCC-CccHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHhCCCCeE-EEecc--hhh-c--cccCCccEEE
Confidence            378898889864 666666666554348999999998766554    35554321 11211  211 1  1124799998


Q ss_pred             Ecc-c-ChHhHHHHHHHhhCCCceEEEE
Q 018529          245 ECT-G-NIDNMISAFECVHDGWGVAVLV  270 (354)
Q Consensus       245 d~~-g-~~~~~~~~~~~l~~~~g~~v~~  270 (354)
                      ... . -+..++.+.+.|+++ |++++.
T Consensus       115 s~~~~~~~~~~~~~~~~Lkpg-G~lvi~  141 (181)
T TIGR00138       115 SRALASLNVLLELTLNLLKVG-GYFLAY  141 (181)
T ss_pred             ehhhhCHHHHHHHHHHhcCCC-CEEEEE
Confidence            643 2 234566778889997 998866

GidB (glucose-inhibited division protein B) appears to be present and in a single copy in nearly all complete eubacterial genomes. It is missing only from some obligate intracellular species of various lineages (Chlamydiae, Ehrlichia, Wolbachia, Anaplasma, Buchnera, etc.). GidB shows a methytransferase fold in its the crystal structure, and acts as a 7-methylguanosine (m(7)G) methyltransferase, apparently specific to 16S rRNA.

>PRK07454 short chain dehydrogenase; Provisional

Probab=96.23  E-value=0.042  Score=47.10  Aligned_cols=79  Identities=25%  Similarity=0.236  Sum_probs=51.2

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCce-EE--cCCCCChhHHHHHHHHcC--C
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD-FV--NTSEHDRPIQEVIAEMTN--G  238 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~~-v~--~~~~~~~~~~~~i~~~~~--~  238 (354)
                      .++++||+|+ |.+|...+..+...|. +|+++++++++.+.+.+    .+... .+  |..+. ..+.+.++....  +
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~   82 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGW-DLALVARSQDALEALAAELRSTGVKAAAYSIDLSNP-EAIAPGIAELLEQFG   82 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCH-HHHHHHHHHHHHHcC
Confidence            4578999987 9999999999988999 89999998876554422    23221 22  22221 123333333221  3


Q ss_pred             CccEEEEcccC
Q 018529          239 GVDRSVECTGN  249 (354)
Q Consensus       239 ~~dvv~d~~g~  249 (354)
                      +.|+++.++|.
T Consensus        83 ~id~lv~~ag~   93 (241)
T PRK07454         83 CPDVLINNAGM   93 (241)
T ss_pred             CCCEEEECCCc
Confidence            68999999874

>PRK07832 short chain dehydrogenase; Provisional

Probab=96.22  E-value=0.068  Score=46.85  Aligned_cols=76  Identities=22%  Similarity=0.342  Sum_probs=48.3

Q ss_pred             eEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH----HhcCCce----EEcCCCCChhHHHHHHHHc--CCCc
Q 018529          172 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD----FVNTSEHDRPIQEVIAEMT--NGGV  240 (354)
Q Consensus       172 ~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~----~~lg~~~----v~~~~~~~~~~~~~i~~~~--~~~~  240 (354)
                      +++|+|+ |++|...++.+...|+ +|+.+++++++.+.+    +..+...    ..|..+.+ .+.+.+.+..  .+++
T Consensus         2 ~vlItGas~giG~~la~~la~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~i   79 (272)
T PRK07832          2 RCFVTGAASGIGRATALRLAAQGA-ELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYD-AVAAFAADIHAAHGSM   79 (272)
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHH-HHHHHHHHHHHhcCCC
Confidence            6899987 9999999998888999 788888887665433    2234321    13333321 1222222221  1368


Q ss_pred             cEEEEcccC
Q 018529          241 DRSVECTGN  249 (354)
Q Consensus       241 dvv~d~~g~  249 (354)
                      |++++++|.
T Consensus        80 d~lv~~ag~   88 (272)
T PRK07832         80 DVVMNIAGI   88 (272)
T ss_pred             CEEEECCCC
Confidence            999999874

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.22  E-value=0.039  Score=48.45  Aligned_cols=79  Identities=14%  Similarity=0.231  Sum_probs=49.3

Q ss_pred             CCCeEEEEcC-C--hhHHHHHHHHHHcCCcEEEEEcCChhhHHHH----HhcCCceE--EcCCCCChhHHHHHHHHcC--
Q 018529          169 RGSSVAVFGL-G--AVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTDF--VNTSEHDRPIQEVIAEMTN--  237 (354)
Q Consensus       169 ~~~~vlI~G~-g--~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~----~~lg~~~v--~~~~~~~~~~~~~i~~~~~--  237 (354)
                      +++++||+|+ +  ++|.+.++.+...|+ +|+.+.++++..+.+    +++|....  .|..+.+ ++.+.+.+...  
T Consensus         6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~-~v~~~~~~~~~~~   83 (271)
T PRK06505          6 QGKRGLIMGVANDHSIAWGIAKQLAAQGA-ELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIA-SVDAVFEALEKKW   83 (271)
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHhCCC-EEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHH-HHHHHHHHHHHHh
Confidence            5788999987 4  899998888888999 888887765432222    33454322  2333321 23333333221  


Q ss_pred             CCccEEEEcccC
Q 018529          238 GGVDRSVECTGN  249 (354)
Q Consensus       238 ~~~dvv~d~~g~  249 (354)
                      +.+|++++++|.
T Consensus        84 g~iD~lVnnAG~   95 (271)
T PRK06505         84 GKLDFVVHAIGF   95 (271)
T ss_pred             CCCCEEEECCcc
Confidence            479999999873

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.21  E-value=0.037  Score=47.97  Aligned_cols=79  Identities=22%  Similarity=0.281  Sum_probs=48.7

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcC-ChhhHHHHHhcCCceE-EcCCCCChhHHHHHHHHc--CCCccEE
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR-SSKRFEEAKKFGVTDF-VNTSEHDRPIQEVIAEMT--NGGVDRS  243 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~-~~~~~~~~~~lg~~~v-~~~~~~~~~~~~~i~~~~--~~~~dvv  243 (354)
                      .+.+++|+|+ |++|...++.+...|+ +|+.+.+ +++..+.+++.+...+ .|..+.+ .+.+.+.+..  .+++|++
T Consensus         6 ~~k~~lItGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~~~id~l   83 (255)
T PRK06463          6 KGKVALITGGTRGIGRAIAEAFLREGA-KVAVLYNSAENEAKELREKGVFTIKCDVGNRD-QVKKSKEVVEKEFGRVDVL   83 (255)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHhCCCeEEEecCCCHH-HHHHHHHHHHHHcCCCCEE
Confidence            4678999987 9999999988888899 6666544 4444444444443222 2333321 2333333322  1378999


Q ss_pred             EEcccC
Q 018529          244 VECTGN  249 (354)
Q Consensus       244 ~d~~g~  249 (354)
                      +.++|.
T Consensus        84 i~~ag~   89 (255)
T PRK06463         84 VNNAGI   89 (255)
T ss_pred             EECCCc
Confidence            998874

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.20  E-value=0.032  Score=48.11  Aligned_cols=79  Identities=24%  Similarity=0.304  Sum_probs=50.4

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-HhcC--Cc-eEE--cCCCCChhHHHHHHHH--cCCC
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFG--VT-DFV--NTSEHDRPIQEVIAEM--TNGG  239 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~~lg--~~-~v~--~~~~~~~~~~~~i~~~--~~~~  239 (354)
                      ++.++||+|+ |.+|...++.+...|. +|+++++++++.+.+ ..+.  .. ..+  |..+. ..+...+.+.  ..+.
T Consensus         4 ~~~~vlItGasg~iG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~   81 (251)
T PRK07231          4 EGKVAIVTGASSGIGEGIARRFAAEGA-RVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDE-ADVEAAVAAALERFGS   81 (251)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCH-HHHHHHHHHHHHHhCC
Confidence            4578999997 9999998888888899 799999998776544 2222  21 122  22221 1222222222  1136


Q ss_pred             ccEEEEcccC
Q 018529          240 VDRSVECTGN  249 (354)
Q Consensus       240 ~dvv~d~~g~  249 (354)
                      +|+||.++|.
T Consensus        82 ~d~vi~~ag~   91 (251)
T PRK07231         82 VDILVNNAGT   91 (251)
T ss_pred             CCEEEECCCC
Confidence            8999998874

>PRK06483 dihydromonapterin reductase; Provisional

Probab=96.20  E-value=0.045  Score=46.79  Aligned_cols=78  Identities=18%  Similarity=0.243  Sum_probs=50.2

Q ss_pred             CCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhh-HHHHHhcCCceE-EcCCCCChhHHHHHHHHcC--CCccEEE
Q 018529          170 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR-FEEAKKFGVTDF-VNTSEHDRPIQEVIAEMTN--GGVDRSV  244 (354)
Q Consensus       170 ~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~-~~~~~~lg~~~v-~~~~~~~~~~~~~i~~~~~--~~~dvv~  244 (354)
                      ++++||+|+ |.+|...++.+...|+ +|+.++++++. .+.+++.++..+ .|..+.+ ++.+.+.+...  +++|+++
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~id~lv   79 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQ-PVIVSYRTHYPAIDGLRQAGAQCIQADFSTNA-GIMAFIDELKQHTDGLRAII   79 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCEEEEcCCCCHH-HHHHHHHHHHhhCCCccEEE
Confidence            468999987 9999999998888899 88888887643 334445554322 2333221 23333333322  3689999


Q ss_pred             EcccC
Q 018529          245 ECTGN  249 (354)
Q Consensus       245 d~~g~  249 (354)
                      +++|.
T Consensus        80 ~~ag~   84 (236)
T PRK06483         80 HNASD   84 (236)
T ss_pred             ECCcc
Confidence            98874

>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]

Probab=96.19  E-value=0.11  Score=45.76  Aligned_cols=101  Identities=25%  Similarity=0.356  Sum_probs=63.8

Q ss_pred             CCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCceEEcCCCCChhHHHHHHHHcCCCcc
Q 018529          166 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTNGGVD  241 (354)
Q Consensus       166 ~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~~~~~~~d  241 (354)
                      .+++|.+||=+|+|+ |.++|..+| +|+.+|+++|.++-..+-+++    -++.........+     ......++.+|
T Consensus       159 ~~~~g~~vlDvGcGS-GILaIAa~k-LGA~~v~g~DiDp~AV~aa~eNa~~N~v~~~~~~~~~~-----~~~~~~~~~~D  231 (300)
T COG2264         159 LLKKGKTVLDVGCGS-GILAIAAAK-LGAKKVVGVDIDPQAVEAARENARLNGVELLVQAKGFL-----LLEVPENGPFD  231 (300)
T ss_pred             hhcCCCEEEEecCCh-hHHHHHHHH-cCCceEEEecCCHHHHHHHHHHHHHcCCchhhhccccc-----chhhcccCccc
Confidence            357999999999864 776665544 577799999999877766654    2333211011110     11112224799


Q ss_pred             EEEEcccC---hHhHHHHHHHhhCCCceEEEEcCCC
Q 018529          242 RSVECTGN---IDNMISAFECVHDGWGVAVLVGVPS  274 (354)
Q Consensus       242 vv~d~~g~---~~~~~~~~~~l~~~~g~~v~~g~~~  274 (354)
                      +|+-.+=-   ..+.......++++ |++++.|...
T Consensus       232 vIVANILA~vl~~La~~~~~~lkpg-g~lIlSGIl~  266 (300)
T COG2264         232 VIVANILAEVLVELAPDIKRLLKPG-GRLILSGILE  266 (300)
T ss_pred             EEEehhhHHHHHHHHHHHHHHcCCC-ceEEEEeehH
Confidence            99865422   13455677789997 9999998664

>PRK06500 short chain dehydrogenase; Provisional

Probab=96.19  E-value=0.036  Score=47.72  Aligned_cols=79  Identities=22%  Similarity=0.368  Sum_probs=51.5

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-HhcCCce-EE--cCCCCC--hhHHHHHHHHcCCCcc
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTD-FV--NTSEHD--RPIQEVIAEMTNGGVD  241 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~~lg~~~-v~--~~~~~~--~~~~~~i~~~~~~~~d  241 (354)
                      ++.+++|+|+ |.+|...++.+...|+ +|+++++++++.+.+ ++++... .+  |..+..  ..+.+.+.+. .+++|
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~id   82 (249)
T PRK06500          5 QGKTALITGGTSGIGLETARQFLAEGA-RVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEA-FGRLD   82 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHH-hCCCC
Confidence            4678999987 9999999999999999 899998887765543 4455432 11  222211  1122222222 13689


Q ss_pred             EEEEcccC
Q 018529          242 RSVECTGN  249 (354)
Q Consensus       242 vv~d~~g~  249 (354)
                      +++.++|.
T Consensus        83 ~vi~~ag~   90 (249)
T PRK06500         83 AVFINAGV   90 (249)
T ss_pred             EEEECCCC
Confidence            99998874

>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed

Probab=96.18  E-value=0.081  Score=44.56  Aligned_cols=101  Identities=22%  Similarity=0.249  Sum_probs=64.4

Q ss_pred             hhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCceEEcCCCCChhHHHHHHHHcC
Q 018529          162 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTN  237 (354)
Q Consensus       162 ~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~~~~  237 (354)
                      .....++++++||-+|+|. |..+..+++.. . +|++++.+++..+.+++    ++...+- ....+  ..+.+.  ..
T Consensus        71 ~~~l~~~~~~~VLeiG~Gs-G~~t~~la~~~-~-~v~~vd~~~~~~~~a~~~~~~~~~~~v~-~~~~d--~~~~~~--~~  142 (212)
T PRK00312         71 TELLELKPGDRVLEIGTGS-GYQAAVLAHLV-R-RVFSVERIKTLQWEAKRRLKQLGLHNVS-VRHGD--GWKGWP--AY  142 (212)
T ss_pred             HHhcCCCCCCEEEEECCCc-cHHHHHHHHHh-C-EEEEEeCCHHHHHHHHHHHHHCCCCceE-EEECC--cccCCC--cC
Confidence            4567788999999998864 55666666654 3 89999999887666543    4543321 11111  111110  11


Q ss_pred             CCccEEEEcccChHhHHHHHHHhhCCCceEEEEc
Q 018529          238 GGVDRSVECTGNIDNMISAFECVHDGWGVAVLVG  271 (354)
Q Consensus       238 ~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g  271 (354)
                      +.||+|+.............+.|+++ |++++.-
T Consensus       143 ~~fD~I~~~~~~~~~~~~l~~~L~~g-G~lv~~~  175 (212)
T PRK00312        143 APFDRILVTAAAPEIPRALLEQLKEG-GILVAPV  175 (212)
T ss_pred             CCcCEEEEccCchhhhHHHHHhcCCC-cEEEEEE
Confidence            37999987655556677888999997 9877543

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=96.17  E-value=0.035  Score=44.09  Aligned_cols=74  Identities=23%  Similarity=0.321  Sum_probs=50.3

Q ss_pred             CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHH-HHhcCCce-EEcCCCCChhHHHHHHHHcCCCccEEEE
Q 018529          168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEE-AKKFGVTD-FVNTSEHDRPIQEVIAEMTNGGVDRSVE  245 (354)
Q Consensus       168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~-~~~lg~~~-v~~~~~~~~~~~~~i~~~~~~~~dvv~d  245 (354)
                      ..+.+++|+|+|.+|...++.+...|...|++++++.++.+. +++++... .....+    ..+.     -+++|+|+.
T Consensus        17 ~~~~~i~iiG~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~~----~~~~-----~~~~Dvvi~   87 (155)
T cd01065          17 LKGKKVLILGAGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYLD----LEEL-----LAEADLIIN   87 (155)
T ss_pred             CCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeecc----hhhc-----cccCCEEEe
Confidence            457889999999999999988888864489999998877654 45555421 011111    2111     136899999


Q ss_pred             cccCh
Q 018529          246 CTGNI  250 (354)
Q Consensus       246 ~~g~~  250 (354)
                      +++..
T Consensus        88 ~~~~~   92 (155)
T cd01065          88 TTPVG   92 (155)
T ss_pred             CcCCC
Confidence            98763

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PRK07062 short chain dehydrogenase; Provisional

Probab=96.17  E-value=0.031  Score=48.79  Aligned_cols=79  Identities=27%  Similarity=0.354  Sum_probs=51.2

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh-----cCCceE----EcCCCCChhHHHHHHHHc--
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-----FGVTDF----VNTSEHDRPIQEVIAEMT--  236 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~-----lg~~~v----~~~~~~~~~~~~~i~~~~--  236 (354)
                      .++++||+|+ +++|...++.+...|+ +|+.+++++++.+.+.+     .+...+    .|..+.+ .+.+.+.+..  
T Consensus         7 ~~k~~lItGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~v~~~~~~~~~~   84 (265)
T PRK07062          7 EGRVAVVTGGSSGIGLATVELLLEAGA-SVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEA-DVAAFAAAVEAR   84 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHH-HHHHHHHHHHHh
Confidence            4789999987 9999999999888999 89999898876554322     111121    2333322 2222233322  


Q ss_pred             CCCccEEEEcccC
Q 018529          237 NGGVDRSVECTGN  249 (354)
Q Consensus       237 ~~~~dvv~d~~g~  249 (354)
                      .+++|++++++|.
T Consensus        85 ~g~id~li~~Ag~   97 (265)
T PRK07062         85 FGGVDMLVNNAGQ   97 (265)
T ss_pred             cCCCCEEEECCCC
Confidence            1479999999874

>PRK07024 short chain dehydrogenase; Provisional

Probab=96.17  E-value=0.039  Score=47.92  Aligned_cols=78  Identities=17%  Similarity=0.179  Sum_probs=50.1

Q ss_pred             CCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh-cCC--c-eE--EcCCCCChhHHHHHHHHcC--CCc
Q 018529          170 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGV--T-DF--VNTSEHDRPIQEVIAEMTN--GGV  240 (354)
Q Consensus       170 ~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~-lg~--~-~v--~~~~~~~~~~~~~i~~~~~--~~~  240 (354)
                      +.++||+|+ |.+|...+..+...|+ +|+.++++.++.+.+.+ +..  . ..  .|..+. ..+.+.+.+...  +.+
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~i~~~~~~~~~~~g~i   79 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGA-TLGLVARRTDALQAFAARLPKAARVSVYAADVRDA-DALAAAAADFIAAHGLP   79 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCH-HHHHHHHHHHHHhCCCC
Confidence            468999987 9999998888888899 89999888877665432 221  1 11  233222 223333333221  358


Q ss_pred             cEEEEcccC
Q 018529          241 DRSVECTGN  249 (354)
Q Consensus       241 dvv~d~~g~  249 (354)
                      |++++++|.
T Consensus        80 d~lv~~ag~   88 (257)
T PRK07024         80 DVVIANAGI   88 (257)
T ss_pred             CEEEECCCc
Confidence            999998873

>PRK08618 ornithine cyclodeaminase; Validated

Probab=96.15  E-value=0.083  Score=47.72  Aligned_cols=94  Identities=17%  Similarity=0.182  Sum_probs=64.0

Q ss_pred             CCCCeEEEEcCChhHHHHHHHH-HHcCCcEEEEEcCChhhHHHHH-h----cCCceEEcCCCCChhHHHHHHHHcCCCcc
Q 018529          168 ERGSSVAVFGLGAVGLAAAEGA-RIAGASRIIGVDRSSKRFEEAK-K----FGVTDFVNTSEHDRPIQEVIAEMTNGGVD  241 (354)
Q Consensus       168 ~~~~~vlI~G~g~~G~~a~~~a-~~~g~~~vi~v~~~~~~~~~~~-~----lg~~~v~~~~~~~~~~~~~i~~~~~~~~d  241 (354)
                      +...+++|+|+|..|...+..+ ...+.+.|.+.++++++.+.+. +    ++.. +..+.+    +.+.+     ...|
T Consensus       125 ~~~~~v~iiGaG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~-~~~~~~----~~~~~-----~~aD  194 (325)
T PRK08618        125 EDAKTLCLIGTGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTE-IYVVNS----ADEAI-----EEAD  194 (325)
T ss_pred             CCCcEEEEECCcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCc-EEEeCC----HHHHH-----hcCC
Confidence            4567899999999998776554 4568889999999988866443 2    3443 222222    33333     2489


Q ss_pred             EEEEcccChHhHHHHHHHhhCCCceEEEEcCCC
Q 018529          242 RSVECTGNIDNMISAFECVHDGWGVAVLVGVPS  274 (354)
Q Consensus       242 vv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~  274 (354)
                      +|+.|+++...+- . ..++++ -.+..+|...
T Consensus       195 iVi~aT~s~~p~i-~-~~l~~G-~hV~~iGs~~  224 (325)
T PRK08618        195 IIVTVTNAKTPVF-S-EKLKKG-VHINAVGSFM  224 (325)
T ss_pred             EEEEccCCCCcch-H-HhcCCC-cEEEecCCCC
Confidence            9999998754333 3 788886 7888888654

>PRK07890 short chain dehydrogenase; Provisional

Probab=96.15  E-value=0.041  Score=47.70  Aligned_cols=80  Identities=24%  Similarity=0.304  Sum_probs=51.4

Q ss_pred             CCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCc---eEEcCCCCChhHHHHHHHHcC--
Q 018529          168 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT---DFVNTSEHDRPIQEVIAEMTN--  237 (354)
Q Consensus       168 ~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~---~v~~~~~~~~~~~~~i~~~~~--  237 (354)
                      -++.++||+|+ |.+|...+..+...|+ +|+.+++++++.+.+.+    .+..   ...|..+. ..+...+.+...  
T Consensus         3 l~~k~vlItGa~~~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~   80 (258)
T PRK07890          3 LKGKVVVVSGVGPGLGRTLAVRAARAGA-DVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDE-DQCANLVALALERF   80 (258)
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCH-HHHHHHHHHHHHHc
Confidence            35688999987 9999999998889999 89999888876554422    2322   12233222 123222322211  


Q ss_pred             CCccEEEEcccC
Q 018529          238 GGVDRSVECTGN  249 (354)
Q Consensus       238 ~~~dvv~d~~g~  249 (354)
                      +.+|+++.++|.
T Consensus        81 g~~d~vi~~ag~   92 (258)
T PRK07890         81 GRVDALVNNAFR   92 (258)
T ss_pred             CCccEEEECCcc
Confidence            368999998874

>PRK08317 hypothetical protein; Provisional

Probab=96.14  E-value=0.064  Score=45.84  Aligned_cols=101  Identities=25%  Similarity=0.384  Sum_probs=68.5

Q ss_pred             hhhcCCCCCCeEEEEcCChhHHHHHHHHHHcC-CcEEEEEcCChhhHHHHHhc----CCc-eEEcCCCCChhHHHHHHHH
Q 018529          162 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKKF----GVT-DFVNTSEHDRPIQEVIAEM  235 (354)
Q Consensus       162 ~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g-~~~vi~v~~~~~~~~~~~~l----g~~-~v~~~~~~~~~~~~~i~~~  235 (354)
                      .+...++++++||-+|+|. |..+..++...+ ..++++++.+++..+.+++.    +.. .++..+...  +     .+
T Consensus        12 ~~~~~~~~~~~vLdiG~G~-G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~d~~~--~-----~~   83 (241)
T PRK08317         12 FELLAVQPGDRVLDVGCGP-GNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRGDADG--L-----PF   83 (241)
T ss_pred             HHHcCCCCCCEEEEeCCCC-CHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEeccccc--C-----CC
Confidence            4567889999999999976 888889998874 23899999999988887664    111 111111110  0     02


Q ss_pred             cCCCccEEEEcc-----c-ChHhHHHHHHHhhCCCceEEEEc
Q 018529          236 TNGGVDRSVECT-----G-NIDNMISAFECVHDGWGVAVLVG  271 (354)
Q Consensus       236 ~~~~~dvv~d~~-----g-~~~~~~~~~~~l~~~~g~~v~~g  271 (354)
                      ..+.+|+|+...     . ....+..+.++|+++ |.+++..
T Consensus        84 ~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~L~~g-G~l~~~~  124 (241)
T PRK08317         84 PDGSFDAVRSDRVLQHLEDPARALAEIARVLRPG-GRVVVLD  124 (241)
T ss_pred             CCCCceEEEEechhhccCCHHHHHHHHHHHhcCC-cEEEEEe
Confidence            224789887532     1 234778899999997 9988765

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=96.14  E-value=0.14  Score=44.63  Aligned_cols=103  Identities=17%  Similarity=0.213  Sum_probs=59.8

Q ss_pred             CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCCh-------------------hh----HHHHHhcCCc-eEEcCCCC
Q 018529          169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS-------------------KR----FEEAKKFGVT-DFVNTSEH  224 (354)
Q Consensus       169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~-------------------~~----~~~~~~lg~~-~v~~~~~~  224 (354)
                      .+.+|+|+|+|++|..++..+-..|.++++.+|.+.                   .|    .+++++++.+ .+..+.+.
T Consensus        29 ~~s~VlVvG~GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i~~~  108 (268)
T PRK15116         29 ADAHICVVGIGGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVDDF  108 (268)
T ss_pred             cCCCEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEEecc
Confidence            457899999999999999999999988999887552                   01    2223334432 22222211


Q ss_pred             ChhHHHHHHHHcCCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCC
Q 018529          225 DRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVP  273 (354)
Q Consensus       225 ~~~~~~~i~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~  273 (354)
                      -  -.+.+.++....+|+|+||+.....-..+.+......-.++..+..
T Consensus       109 i--~~e~~~~ll~~~~D~VIdaiD~~~~k~~L~~~c~~~~ip~I~~gGa  155 (268)
T PRK15116        109 I--TPDNVAEYMSAGFSYVIDAIDSVRPKAALIAYCRRNKIPLVTTGGA  155 (268)
T ss_pred             c--ChhhHHHHhcCCCCEEEEcCCCHHHHHHHHHHHHHcCCCEEEECCc
Confidence            0  0122333333369999999987544333444333331445555443

>PLN02823 spermine synthase

Probab=96.12  E-value=0.058  Score=48.69  Aligned_cols=100  Identities=13%  Similarity=0.119  Sum_probs=63.3

Q ss_pred             CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCC-c-eEEcCCCC---ChhHHHHHHHHcCCCccEE
Q 018529          169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV-T-DFVNTSEH---DRPIQEVIAEMTNGGVDRS  243 (354)
Q Consensus       169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~-~-~v~~~~~~---~~~~~~~i~~~~~~~~dvv  243 (354)
                      ..++|||+|+|. |.++..+++..+..+|++++.+++-.+.++++-. . ..+....-   -.|..+.+++ ..+.+|+|
T Consensus       103 ~pk~VLiiGgG~-G~~~re~l~~~~~~~v~~VEiD~~vv~lar~~~~~~~~~~~dprv~v~~~Da~~~L~~-~~~~yDvI  180 (336)
T PLN02823        103 NPKTVFIMGGGE-GSTAREVLRHKTVEKVVMCDIDQEVVDFCRKHLTVNREAFCDKRLELIINDARAELEK-RDEKFDVI  180 (336)
T ss_pred             CCCEEEEECCCc-hHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhcccccccccCCceEEEEChhHHHHhh-CCCCccEE
Confidence            457899998864 5666777787776799999999999999987421 1 01110000   0124444533 33489999


Q ss_pred             E-Eccc-----------ChHhHH-HHHHHhhCCCceEEEEc
Q 018529          244 V-ECTG-----------NIDNMI-SAFECVHDGWGVAVLVG  271 (354)
Q Consensus       244 ~-d~~g-----------~~~~~~-~~~~~l~~~~g~~v~~g  271 (354)
                      | |...           +.+.++ .+.+.|+++ |.++.-.
T Consensus       181 i~D~~dp~~~~~~~~Lyt~eF~~~~~~~~L~p~-Gvlv~q~  220 (336)
T PLN02823        181 IGDLADPVEGGPCYQLYTKSFYERIVKPKLNPG-GIFVTQA  220 (336)
T ss_pred             EecCCCccccCcchhhccHHHHHHHHHHhcCCC-cEEEEec
Confidence            7 4321           124566 788899998 9887543

>PRK08589 short chain dehydrogenase; Validated

Probab=96.10  E-value=0.037  Score=48.55  Aligned_cols=79  Identities=23%  Similarity=0.309  Sum_probs=49.5

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh---cCCc-e--EEcCCCCChhHHHHHHHHc--CCC
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK---FGVT-D--FVNTSEHDRPIQEVIAEMT--NGG  239 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~---lg~~-~--v~~~~~~~~~~~~~i~~~~--~~~  239 (354)
                      +++++||+|+ +++|...++.+...|+ +|+.++++++..+.+.+   .+.. .  ..|..+.+ .+.+.+.+..  .++
T Consensus         5 ~~k~vlItGas~gIG~aia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~g~   82 (272)
T PRK08589          5 ENKVAVITGASTGIGQASAIALAQEGA-YVLAVDIAEAVSETVDKIKSNGGKAKAYHVDISDEQ-QVKDFASEIKEQFGR   82 (272)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHhcCCeEEEEEeecCCHH-HHHHHHHHHHHHcCC
Confidence            4679999987 9999998888888899 88888888433333333   2321 1  23333321 2223333322  136


Q ss_pred             ccEEEEcccC
Q 018529          240 VDRSVECTGN  249 (354)
Q Consensus       240 ~dvv~d~~g~  249 (354)
                      .|++++++|.
T Consensus        83 id~li~~Ag~   92 (272)
T PRK08589         83 VDVLFNNAGV   92 (272)
T ss_pred             cCEEEECCCC
Confidence            8999998874

>PRK06482 short chain dehydrogenase; Provisional

Probab=96.10  E-value=0.04  Score=48.41  Aligned_cols=77  Identities=17%  Similarity=0.240  Sum_probs=50.4

Q ss_pred             CeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhc-CCc-e--EEcCCCCChhHHHHHHHHc--CCCccEE
Q 018529          171 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF-GVT-D--FVNTSEHDRPIQEVIAEMT--NGGVDRS  243 (354)
Q Consensus       171 ~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~l-g~~-~--v~~~~~~~~~~~~~i~~~~--~~~~dvv  243 (354)
                      .++||+|+ |.+|...++.+...|. +|+++.+++++.+.+++. +.. .  ..|..+.+ .+.+.+.+..  .+++|++
T Consensus         3 k~vlVtGasg~IG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~id~v   80 (276)
T PRK06482          3 KTWFITGASSGFGRGMTERLLARGD-RVAATVRRPDALDDLKARYGDRLWVLQLDVTDSA-AVRAVVDRAFAALGRIDVV   80 (276)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCceEEEEccCCCHH-HHHHHHHHHHHHcCCCCEE
Confidence            57999987 9999998888888898 899998988877665442 221 1  12333221 2333333321  1368999


Q ss_pred             EEcccC
Q 018529          244 VECTGN  249 (354)
Q Consensus       244 ~d~~g~  249 (354)
                      |.++|.
T Consensus        81 i~~ag~   86 (276)
T PRK06482         81 VSNAGY   86 (276)
T ss_pred             EECCCC
Confidence            998874

>PRK07677 short chain dehydrogenase; Provisional

Probab=96.10  E-value=0.045  Score=47.32  Aligned_cols=78  Identities=22%  Similarity=0.308  Sum_probs=49.9

Q ss_pred             CCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCc-eEE--cCCCCChhHHHHHHHHc--CCC
Q 018529          170 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT-DFV--NTSEHDRPIQEVIAEMT--NGG  239 (354)
Q Consensus       170 ~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~-~v~--~~~~~~~~~~~~i~~~~--~~~  239 (354)
                      ++++||+|+ |++|...++.+...|+ +|++++++.++.+.+.+    .+.. ..+  |..+. ..+.+.+.+..  .++
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~   78 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGA-NVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNP-EDVQKMVEQIDEKFGR   78 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCH-HHHHHHHHHHHHHhCC
Confidence            468999987 9999999999999999 89999888776554432    2322 222  22221 12222232221  136


Q ss_pred             ccEEEEcccC
Q 018529          240 VDRSVECTGN  249 (354)
Q Consensus       240 ~dvv~d~~g~  249 (354)
                      +|++++++|.
T Consensus        79 id~lI~~ag~   88 (252)
T PRK07677         79 IDALINNAAG   88 (252)
T ss_pred             ccEEEECCCC
Confidence            8999998873

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=96.10  E-value=0.1  Score=39.04  Aligned_cols=74  Identities=27%  Similarity=0.407  Sum_probs=54.5

Q ss_pred             EEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcccChH
Q 018529          173 VAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNID  251 (354)
Q Consensus       173 vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~~~  251 (354)
                      |+|.|.|.+|...++.++..+. +|++++.++++.+.+++.|.. ++..+..+   .+.+++..-..++.++-+++...
T Consensus         1 vvI~G~g~~~~~i~~~L~~~~~-~vvvid~d~~~~~~~~~~~~~-~i~gd~~~---~~~l~~a~i~~a~~vv~~~~~d~   74 (116)
T PF02254_consen    1 VVIIGYGRIGREIAEQLKEGGI-DVVVIDRDPERVEELREEGVE-VIYGDATD---PEVLERAGIEKADAVVILTDDDE   74 (116)
T ss_dssp             EEEES-SHHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTSE-EEES-TTS---HHHHHHTTGGCESEEEEESSSHH
T ss_pred             eEEEcCCHHHHHHHHHHHhCCC-EEEEEECCcHHHHHHHhcccc-cccccchh---hhHHhhcCccccCEEEEccCCHH
Confidence            5788999999999999999665 899999999999999998864 44443333   23345443337899998887743

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=96.09  E-value=0.083  Score=45.03  Aligned_cols=99  Identities=20%  Similarity=0.234  Sum_probs=57.6

Q ss_pred             CCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCCh------h-------------h----HHHHHhcCCceEEcCCCCCh
Q 018529          170 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS------K-------------R----FEEAKKFGVTDFVNTSEHDR  226 (354)
Q Consensus       170 ~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~------~-------------~----~~~~~~lg~~~v~~~~~~~~  226 (354)
                      ..+|+|+|+|++|..++..+-..|..+++.+|.+.      .             |    .+++++++.+.-+...+.. 
T Consensus        11 ~~~VlVvG~GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~~~~-   89 (231)
T cd00755          11 NAHVAVVGLGGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAVEEF-   89 (231)
T ss_pred             CCCEEEECCCHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEeeee-
Confidence            36799999999999999999999999999987543      1             1    1222333332111111111 


Q ss_pred             hH-HHHHHHHcCCCccEEEEcccChHhHHHHHHHhhCCCceEEEE
Q 018529          227 PI-QEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLV  270 (354)
Q Consensus       227 ~~-~~~i~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~  270 (354)
                       + .+.+.++....+|+|+||+.+...-..+.+......-.++..
T Consensus        90 -i~~~~~~~l~~~~~D~VvdaiD~~~~k~~L~~~c~~~~ip~I~s  133 (231)
T cd00755          90 -LTPDNSEDLLGGDPDFVVDAIDSIRAKVALIAYCRKRKIPVISS  133 (231)
T ss_pred             -cCHhHHHHHhcCCCCEEEEcCCCHHHHHHHHHHHHHhCCCEEEE
Confidence             1 122333333469999999987654444444443331334443

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=96.09  E-value=0.02  Score=50.44  Aligned_cols=74  Identities=23%  Similarity=0.313  Sum_probs=50.6

Q ss_pred             CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH-hcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEc
Q 018529          168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  246 (354)
Q Consensus       168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~-~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~  246 (354)
                      ..+.+++|+|+|++|.+++..+...|..+|+++.|+.++.+.+. +++....+.. +.+  ..+.+     ..+|+|++|
T Consensus       121 ~~~k~vlVlGaGg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~-~~~--~~~~~-----~~~DivIna  192 (278)
T PRK00258        121 LKGKRILILGAGGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAEL-DLE--LQEEL-----ADFDLIINA  192 (278)
T ss_pred             CCCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceee-ccc--chhcc-----ccCCEEEEC
Confidence            45678999999999999999999999669999999988876553 3432110111 000  11111     258999999


Q ss_pred             ccC
Q 018529          247 TGN  249 (354)
Q Consensus       247 ~g~  249 (354)
                      ++.
T Consensus       193 Tp~  195 (278)
T PRK00258        193 TSA  195 (278)
T ss_pred             CcC
Confidence            875

>PRK07478 short chain dehydrogenase; Provisional

Probab=96.07  E-value=0.042  Score=47.60  Aligned_cols=79  Identities=19%  Similarity=0.292  Sum_probs=50.7

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH----HhcCCce-EE--cCCCCChhHHHHHHHHc--CC
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-FV--NTSEHDRPIQEVIAEMT--NG  238 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~----~~lg~~~-v~--~~~~~~~~~~~~i~~~~--~~  238 (354)
                      +++++||+|+ |++|...+..+...|+ +|+.+++++++.+.+    ++.+... .+  |..+.+ ...+.+.+..  .+
T Consensus         5 ~~k~~lItGas~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~   82 (254)
T PRK07478          5 NGKVAIITGASSGIGRAAAKLFAREGA-KVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEA-YAKALVALAVERFG   82 (254)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHH-HHHHHHHHHHHhcC
Confidence            3678999987 9999999888888999 888888888776543    2234322 22  222221 1222232221  13


Q ss_pred             CccEEEEcccC
Q 018529          239 GVDRSVECTGN  249 (354)
Q Consensus       239 ~~dvv~d~~g~  249 (354)
                      ++|+++.++|.
T Consensus        83 ~id~li~~ag~   93 (254)
T PRK07478         83 GLDIAFNNAGT   93 (254)
T ss_pred             CCCEEEECCCC
Confidence            79999998874

>PRK01683 trans-aconitate 2-methyltransferase; Provisional

Probab=96.06  E-value=0.085  Score=45.92  Aligned_cols=99  Identities=22%  Similarity=0.230  Sum_probs=66.3

Q ss_pred             hhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCc-eEEcCCCCChhHHHHHHHHcCCCc
Q 018529          162 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT-DFVNTSEHDRPIQEVIAEMTNGGV  240 (354)
Q Consensus       162 ~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~-~v~~~~~~~~~~~~~i~~~~~~~~  240 (354)
                      .....++++++||=+|+|. |..+..+++..+..+|++++.+++..+.+++.-.. .++..   +  ..+ +  ...+.+
T Consensus        24 l~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~v~gvD~s~~~i~~a~~~~~~~~~~~~---d--~~~-~--~~~~~f   94 (258)
T PRK01683         24 LARVPLENPRYVVDLGCGP-GNSTELLVERWPAARITGIDSSPAMLAEARSRLPDCQFVEA---D--IAS-W--QPPQAL   94 (258)
T ss_pred             HhhCCCcCCCEEEEEcccC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhCCCCeEEEC---c--hhc-c--CCCCCc
Confidence            3445678889999999874 67778888876444999999999988888764221 12211   1  111 1  112379


Q ss_pred             cEEEEccc------ChHhHHHHHHHhhCCCceEEEE
Q 018529          241 DRSVECTG------NIDNMISAFECVHDGWGVAVLV  270 (354)
Q Consensus       241 dvv~d~~g------~~~~~~~~~~~l~~~~g~~v~~  270 (354)
                      |+|+....      ....+..+.+.|+++ |.+++.
T Consensus        95 D~v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~~~~~  129 (258)
T PRK01683         95 DLIFANASLQWLPDHLELFPRLVSLLAPG-GVLAVQ  129 (258)
T ss_pred             cEEEEccChhhCCCHHHHHHHHHHhcCCC-cEEEEE
Confidence            99986533      125688889999997 998775

>PRK07574 formate dehydrogenase; Provisional

Probab=96.06  E-value=0.067  Score=49.25  Aligned_cols=91  Identities=16%  Similarity=0.185  Sum_probs=62.3

Q ss_pred             CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEccc
Q 018529          169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  248 (354)
Q Consensus       169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g  248 (354)
                      .|.+|.|+|.|.||...++.++.+|. +|++.+++....+..+++|...   +.+    +.+.++     ..|+|+.+.+
T Consensus       191 ~gktVGIvG~G~IG~~vA~~l~~fG~-~V~~~dr~~~~~~~~~~~g~~~---~~~----l~ell~-----~aDvV~l~lP  257 (385)
T PRK07574        191 EGMTVGIVGAGRIGLAVLRRLKPFDV-KLHYTDRHRLPEEVEQELGLTY---HVS----FDSLVS-----VCDVVTIHCP  257 (385)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCCCCchhhHhhcCcee---cCC----HHHHhh-----cCCEEEEcCC
Confidence            57789999999999999999999999 9999988764445555555421   111    333222     3689888776


Q ss_pred             ChHhH-----HHHHHHhhCCCceEEEEcCC
Q 018529          249 NIDNM-----ISAFECVHDGWGVAVLVGVP  273 (354)
Q Consensus       249 ~~~~~-----~~~~~~l~~~~g~~v~~g~~  273 (354)
                      ..+..     +..+..|+++ ..+|.++..
T Consensus       258 lt~~T~~li~~~~l~~mk~g-a~lIN~aRG  286 (385)
T PRK07574        258 LHPETEHLFDADVLSRMKRG-SYLVNTARG  286 (385)
T ss_pred             CCHHHHHHhCHHHHhcCCCC-cEEEECCCC
Confidence            43322     2456778886 777777654

>PRK05854 short chain dehydrogenase; Provisional

Probab=96.05  E-value=0.049  Score=48.92  Aligned_cols=79  Identities=20%  Similarity=0.223  Sum_probs=49.7

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-Hhc-----CCc-e--EEcCCCCC--hhHHHHHHHHc
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKF-----GVT-D--FVNTSEHD--RPIQEVIAEMT  236 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~~l-----g~~-~--v~~~~~~~--~~~~~~i~~~~  236 (354)
                      .+++++|+|+ +++|...+..+...|+ +|+.+.++.++.+.+ +++     +.. .  ..|..+.+  ..+.+.+.+. 
T Consensus        13 ~gk~~lITGas~GIG~~~a~~La~~G~-~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~-   90 (313)
T PRK05854         13 SGKRAVVTGASDGLGLGLARRLAAAGA-EVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAE-   90 (313)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHh-
Confidence            4688999987 9999998888888899 888888887765433 222     111 1  12333321  1222233222 


Q ss_pred             CCCccEEEEcccC
Q 018529          237 NGGVDRSVECTGN  249 (354)
Q Consensus       237 ~~~~dvv~d~~g~  249 (354)
                      .+.+|++++++|.
T Consensus        91 ~~~iD~li~nAG~  103 (313)
T PRK05854         91 GRPIHLLINNAGV  103 (313)
T ss_pred             CCCccEEEECCcc
Confidence            2378999998874

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.05  E-value=0.053  Score=47.20  Aligned_cols=79  Identities=19%  Similarity=0.260  Sum_probs=48.1

Q ss_pred             CCCeEEEEcCC---hhHHHHHHHHHHcCCcEEEEEcCChhhHHH----HHhcCCceEE--cCCCCChhHHHHHHHHcC--
Q 018529          169 RGSSVAVFGLG---AVGLAAAEGARIAGASRIIGVDRSSKRFEE----AKKFGVTDFV--NTSEHDRPIQEVIAEMTN--  237 (354)
Q Consensus       169 ~~~~vlI~G~g---~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~----~~~lg~~~v~--~~~~~~~~~~~~i~~~~~--  237 (354)
                      +++++||+|++   ++|.+.++.+...|+ +|+.++++++..+.    .++++....+  |..+. .+..+.+.+...  
T Consensus         9 ~~k~~lItGas~g~GIG~a~a~~la~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~v~~~~~~~~~~~   86 (258)
T PRK07533          9 AGKRGLVVGIANEQSIAWGCARAFRALGA-ELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREP-GQLEAVFARIAEEW   86 (258)
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHHHhhccceEEecCcCCH-HHHHHHHHHHHHHc
Confidence            47899999863   899998888888899 78888787543322    2334432222  22222 122222322221  


Q ss_pred             CCccEEEEcccC
Q 018529          238 GGVDRSVECTGN  249 (354)
Q Consensus       238 ~~~dvv~d~~g~  249 (354)
                      +.+|++++++|.
T Consensus        87 g~ld~lv~nAg~   98 (258)
T PRK07533         87 GRLDFLLHSIAF   98 (258)
T ss_pred             CCCCEEEEcCcc
Confidence            478999998863

>PRK08862 short chain dehydrogenase; Provisional

Probab=96.05  E-value=0.044  Score=46.74  Aligned_cols=78  Identities=12%  Similarity=0.130  Sum_probs=50.1

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH----HhcCCce-E--EcCCCCChhHHHHHHHHcC--C
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-F--VNTSEHDRPIQEVIAEMTN--G  238 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~----~~lg~~~-v--~~~~~~~~~~~~~i~~~~~--~  238 (354)
                      ++++++|+|+ +++|.+.+..+...|+ +|+.+.+++++.+.+    ++.+... .  .|..+. ..+.+.+.+...  +
T Consensus         4 ~~k~~lVtGas~GIG~aia~~la~~G~-~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~g   81 (227)
T PRK08862          4 KSSIILITSAGSVLGRTISCHFARLGA-TLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQ-ESIRHLFDAIEQQFN   81 (227)
T ss_pred             CCeEEEEECCccHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCH-HHHHHHHHHHHHHhC
Confidence            4678999987 8999998888888899 888888888776543    2335332 1  222222 122222222221  3


Q ss_pred             -CccEEEEccc
Q 018529          239 -GVDRSVECTG  248 (354)
Q Consensus       239 -~~dvv~d~~g  248 (354)
                       .+|++++++|
T Consensus        82 ~~iD~li~nag   92 (227)
T PRK08862         82 RAPDVLVNNWT   92 (227)
T ss_pred             CCCCEEEECCc
Confidence             6999999986

>PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated

Probab=96.04  E-value=0.13  Score=42.32  Aligned_cols=100  Identities=18%  Similarity=0.198  Sum_probs=64.4

Q ss_pred             hhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCceEEcCCCCChhHHHHHHHHcC
Q 018529          162 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTN  237 (354)
Q Consensus       162 ~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~~~~  237 (354)
                      .....+.++++||=+|+|. |..++.+++.....+|++++.+++..+.+++    ++...+-.. ..+  ...    ...
T Consensus        24 ~~~l~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~n~~~~~~~~i~~~-~~d--~~~----~~~   95 (187)
T PRK08287         24 LSKLELHRAKHLIDVGAGT-GSVSIEAALQFPSLQVTAIERNPDALRLIKENRQRFGCGNIDII-PGE--API----ELP   95 (187)
T ss_pred             HHhcCCCCCCEEEEECCcC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCeEEE-ecC--chh----hcC
Confidence            3445677888998888864 7777777776543499999999988777654    443322111 111  111    112


Q ss_pred             CCccEEEEccc---ChHhHHHHHHHhhCCCceEEEE
Q 018529          238 GGVDRSVECTG---NIDNMISAFECVHDGWGVAVLV  270 (354)
Q Consensus       238 ~~~dvv~d~~g---~~~~~~~~~~~l~~~~g~~v~~  270 (354)
                      +.+|+|+....   -...++.+.+.|+++ |++++.
T Consensus        96 ~~~D~v~~~~~~~~~~~~l~~~~~~Lk~g-G~lv~~  130 (187)
T PRK08287         96 GKADAIFIGGSGGNLTAIIDWSLAHLHPG-GRLVLT  130 (187)
T ss_pred             cCCCEEEECCCccCHHHHHHHHHHhcCCC-eEEEEE
Confidence            36999986432   124677888999997 998764

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=96.04  E-value=0.044  Score=47.48  Aligned_cols=79  Identities=28%  Similarity=0.417  Sum_probs=51.1

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH----HhcCCce-EE--cCCCCChhHHHHHHHHc--CC
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-FV--NTSEHDRPIQEVIAEMT--NG  238 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~----~~lg~~~-v~--~~~~~~~~~~~~i~~~~--~~  238 (354)
                      .++++||+|+ |.+|...++.+...|+ +|+.+++++++.+.+    ++.|... .+  |..+. ..+.+.+.+..  .+
T Consensus         9 ~~k~vlItGa~g~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~   86 (255)
T PRK07523          9 TGRRALVTGSSQGIGYALAEGLAQAGA-EVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDH-DAVRAAIDAFEAEIG   86 (255)
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCH-HHHHHHHHHHHHhcC
Confidence            4789999987 9999999998888899 899998887765433    2233321 12  33332 12333333222  23


Q ss_pred             CccEEEEcccC
Q 018529          239 GVDRSVECTGN  249 (354)
Q Consensus       239 ~~dvv~d~~g~  249 (354)
                      +.|++|.++|.
T Consensus        87 ~~d~li~~ag~   97 (255)
T PRK07523         87 PIDILVNNAGM   97 (255)
T ss_pred             CCCEEEECCCC
Confidence            78999999874

>PRK00121 trmB tRNA (guanine-N(7)-)-methyltransferase; Reviewed

Probab=96.03  E-value=0.13  Score=42.95  Aligned_cols=98  Identities=20%  Similarity=0.194  Sum_probs=64.7

Q ss_pred             CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCceEEcCCCCChhHHHHHHHHc-CCCccEE
Q 018529          169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMT-NGGVDRS  243 (354)
Q Consensus       169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~~~-~~~~dvv  243 (354)
                      ++.+||-+|+|. |..+..+++.....+|++++.+++..+.+++    .+...+- ....+  +.+.+.... .+.+|.|
T Consensus        40 ~~~~VLDiGcGt-G~~~~~la~~~p~~~v~gVD~s~~~i~~a~~~~~~~~~~~v~-~~~~d--~~~~l~~~~~~~~~D~V  115 (202)
T PRK00121         40 DAPIHLEIGFGK-GEFLVEMAKANPDINFIGIEVHEPGVGKALKKIEEEGLTNLR-LLCGD--AVEVLLDMFPDGSLDRI  115 (202)
T ss_pred             CCCeEEEEccCC-CHHHHHHHHHCCCccEEEEEechHHHHHHHHHHHHcCCCCEE-EEecC--HHHHHHHHcCccccceE
Confidence            567888899875 7777788887644489999999998887754    2333221 11122  322333222 3478988


Q ss_pred             EEccc--------------ChHhHHHHHHHhhCCCceEEEEc
Q 018529          244 VECTG--------------NIDNMISAFECVHDGWGVAVLVG  271 (354)
Q Consensus       244 ~d~~g--------------~~~~~~~~~~~l~~~~g~~v~~g  271 (354)
                      +-...              ....++.+.+.|+++ |.+++..
T Consensus       116 ~~~~~~p~~~~~~~~~~~~~~~~l~~i~~~Lkpg-G~l~i~~  156 (202)
T PRK00121        116 YLNFPDPWPKKRHHKRRLVQPEFLALYARKLKPG-GEIHFAT  156 (202)
T ss_pred             EEECCCCCCCccccccccCCHHHHHHHHHHcCCC-CEEEEEc
Confidence            76432              235688899999997 9988763

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=96.03  E-value=0.086  Score=41.30  Aligned_cols=32  Identities=28%  Similarity=0.396  Sum_probs=28.7

Q ss_pred             eEEEEcCChhHHHHHHHHHHcCCcEEEEEcCC
Q 018529          172 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRS  203 (354)
Q Consensus       172 ~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~  203 (354)
                      +|+|+|+|++|...+..+...|.++++.+|.+
T Consensus         1 ~VliiG~GglGs~ia~~L~~~Gv~~i~ivD~d   32 (143)
T cd01483           1 RVLLVGLGGLGSEIALNLARSGVGKITLIDFD   32 (143)
T ss_pred             CEEEECCCHHHHHHHHHHHHCCCCEEEEEcCC
Confidence            58999999999999999999999889998755

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>PRK06179 short chain dehydrogenase; Provisional

Probab=96.03  E-value=0.028  Score=49.19  Aligned_cols=76  Identities=26%  Similarity=0.379  Sum_probs=49.6

Q ss_pred             CCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCce-EEcCCCCChhHHHHHHHHc--CCCccEEEE
Q 018529          170 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD-FVNTSEHDRPIQEVIAEMT--NGGVDRSVE  245 (354)
Q Consensus       170 ~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~-v~~~~~~~~~~~~~i~~~~--~~~~dvv~d  245 (354)
                      +++++|+|+ |.+|...++.+...|+ +|++++++.++.+...  +... ..|..+. ..+.+.++...  .+.+|++++
T Consensus         4 ~~~vlVtGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~--~~~~~~~D~~d~-~~~~~~~~~~~~~~g~~d~li~   79 (270)
T PRK06179          4 SKVALVTGASSGIGRATAEKLARAGY-RVFGTSRNPARAAPIP--GVELLELDVTDD-ASVQAAVDEVIARAGRIDVLVN   79 (270)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCChhhccccC--CCeeEEeecCCH-HHHHHHHHHHHHhCCCCCEEEE
Confidence            568999987 9999998888888899 8999988876554322  2222 2233332 22333333332  236899999


Q ss_pred             cccC
Q 018529          246 CTGN  249 (354)
Q Consensus       246 ~~g~  249 (354)
                      ++|.
T Consensus        80 ~ag~   83 (270)
T PRK06179         80 NAGV   83 (270)
T ss_pred             CCCC
Confidence            9884

>PRK06172 short chain dehydrogenase; Provisional

Probab=96.03  E-value=0.043  Score=47.45  Aligned_cols=79  Identities=22%  Similarity=0.338  Sum_probs=50.2

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH----HhcCCce-E--EcCCCCChhHHHHHHHHc--CC
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-F--VNTSEHDRPIQEVIAEMT--NG  238 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~----~~lg~~~-v--~~~~~~~~~~~~~i~~~~--~~  238 (354)
                      +++++||+|+ |.+|...+..+...|+ +|+.+++++++.+.+    ++.+... .  .|..+.+ .+.+.+.+..  .+
T Consensus         6 ~~k~ilItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~i~~~~~~~~~~~g   83 (253)
T PRK06172          6 SGKVALVTGGAAGIGRATALAFAREGA-KVVVADRDAAGGEETVALIREAGGEALFVACDVTRDA-EVKALVEQTIAAYG   83 (253)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHH-HHHHHHHHHHHHhC
Confidence            4689999987 9999998888888898 899999987764433    3334321 2  2222221 2222222221  14


Q ss_pred             CccEEEEcccC
Q 018529          239 GVDRSVECTGN  249 (354)
Q Consensus       239 ~~dvv~d~~g~  249 (354)
                      ++|+++.+.|.
T Consensus        84 ~id~li~~ag~   94 (253)
T PRK06172         84 RLDYAFNNAGI   94 (253)
T ss_pred             CCCEEEECCCC
Confidence            78999998874

>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family

Probab=96.02  E-value=0.083  Score=44.51  Aligned_cols=102  Identities=22%  Similarity=0.185  Sum_probs=62.7

Q ss_pred             CCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-HhcCCceEEc-------CCCCChh-HHHHHHHHc-
Q 018529          167 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTDFVN-------TSEHDRP-IQEVIAEMT-  236 (354)
Q Consensus       167 ~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~~lg~~~v~~-------~~~~~~~-~~~~i~~~~-  236 (354)
                      +.++.+||+.|||. |.-++.+|. .|. .|++++.++...+.+ ++.+......       +...+-. ....+.++. 
T Consensus        32 ~~~~~rvLd~GCG~-G~da~~LA~-~G~-~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~  108 (213)
T TIGR03840        32 LPAGARVFVPLCGK-SLDLAWLAE-QGH-RVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALTA  108 (213)
T ss_pred             CCCCCeEEEeCCCc-hhHHHHHHh-CCC-eEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCCc
Confidence            35778999999975 788888875 698 999999999988875 3333221000       0000000 000010111 


Q ss_pred             --CCCccEEEEccc--------ChHhHHHHHHHhhCCCceEEEEcC
Q 018529          237 --NGGVDRSVECTG--------NIDNMISAFECVHDGWGVAVLVGV  272 (354)
Q Consensus       237 --~~~~dvv~d~~g--------~~~~~~~~~~~l~~~~g~~v~~g~  272 (354)
                        .+.||.|+|+..        ....+..+.+.|+++ |++++...
T Consensus       109 ~~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpg-G~~ll~~~  153 (213)
T TIGR03840       109 ADLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPG-ARQLLITL  153 (213)
T ss_pred             ccCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCC-CeEEEEEE
Confidence              136899999653        124677899999997 98666654

Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=96.02  E-value=0.048  Score=47.39  Aligned_cols=79  Identities=29%  Similarity=0.449  Sum_probs=51.2

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH----hcCCce-E--EcCCCCChhHHHHHHHHcC--C
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD-F--VNTSEHDRPIQEVIAEMTN--G  238 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~----~lg~~~-v--~~~~~~~~~~~~~i~~~~~--~  238 (354)
                      ++.++||+|+ |.+|...++.+...|+ +|+.++++.++.+.+.    +.+... .  .|..+.+ .+.+.+.+...  +
T Consensus        11 ~~k~ilItGa~g~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~-~i~~~~~~~~~~~~   88 (259)
T PRK08213         11 SGKTALVTGGSRGLGLQIAEALGEAGA-RVVLSARKAEELEEAAAHLEALGIDALWIAADVADEA-DIERLAEETLERFG   88 (259)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHH-HHHHHHHHHHHHhC
Confidence            4688999987 9999999988888999 8999989887765443    223221 2  2333221 23222222211  3


Q ss_pred             CccEEEEcccC
Q 018529          239 GVDRSVECTGN  249 (354)
Q Consensus       239 ~~dvv~d~~g~  249 (354)
                      ++|.++.++|.
T Consensus        89 ~id~vi~~ag~   99 (259)
T PRK08213         89 HVDILVNNAGA   99 (259)
T ss_pred             CCCEEEECCCC
Confidence            68999999874

>PRK08264 short chain dehydrogenase; Validated

Probab=96.02  E-value=0.045  Score=46.80  Aligned_cols=75  Identities=19%  Similarity=0.275  Sum_probs=49.0

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCc-eE--EcCCCCChhHHHHHHHHcCCCccEEE
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT-DF--VNTSEHDRPIQEVIAEMTNGGVDRSV  244 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~-~v--~~~~~~~~~~~~~i~~~~~~~~dvv~  244 (354)
                      .+.++||+|+ |.+|...++.+...|.++|++++++.++.+.   .+.. .+  .|..+. ..+.+.++..  +.+|+||
T Consensus         5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~---~~~~~~~~~~D~~~~-~~~~~~~~~~--~~id~vi   78 (238)
T PRK08264          5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD---LGPRVVPLQLDVTDP-ASVAAAAEAA--SDVTILV   78 (238)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh---cCCceEEEEecCCCH-HHHHHHHHhc--CCCCEEE
Confidence            4678999987 9999999999988998678888888766543   2221 12  222221 1233323222  3589999


Q ss_pred             EcccC
Q 018529          245 ECTGN  249 (354)
Q Consensus       245 d~~g~  249 (354)
                      .+.|.
T Consensus        79 ~~ag~   83 (238)
T PRK08264         79 NNAGI   83 (238)
T ss_pred             ECCCc
Confidence            98876

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=96.01  E-value=0.068  Score=45.49  Aligned_cols=73  Identities=27%  Similarity=0.421  Sum_probs=55.2

Q ss_pred             eEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH--hcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcccC
Q 018529          172 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK--KFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN  249 (354)
Q Consensus       172 ~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~--~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~  249 (354)
                      .++|+|+|.+|...++.+...|. .|++++.++++.+...  ++... ++..+..+   .+.++++.-..+|+++-++|.
T Consensus         2 ~iiIiG~G~vG~~va~~L~~~g~-~Vv~Id~d~~~~~~~~~~~~~~~-~v~gd~t~---~~~L~~agi~~aD~vva~t~~   76 (225)
T COG0569           2 KIIIIGAGRVGRSVARELSEEGH-NVVLIDRDEERVEEFLADELDTH-VVIGDATD---EDVLEEAGIDDADAVVAATGN   76 (225)
T ss_pred             EEEEECCcHHHHHHHHHHHhCCC-ceEEEEcCHHHHHHHhhhhcceE-EEEecCCC---HHHHHhcCCCcCCEEEEeeCC
Confidence            57889999999999999999998 9999999999987733  35554 44333333   234666643479999999988

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=96.01  E-value=0.15  Score=44.10  Aligned_cols=101  Identities=16%  Similarity=0.143  Sum_probs=60.5

Q ss_pred             CCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhc--CCceE-EcCCCCChhHHHHHHHHcCCCccEE
Q 018529          168 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF--GVTDF-VNTSEHDRPIQEVIAEMTNGGVDRS  243 (354)
Q Consensus       168 ~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~l--g~~~v-~~~~~~~~~~~~~i~~~~~~~~dvv  243 (354)
                      ..+.+|||+|+ |.+|...+..+...|. .|+++.++.++.+.....  ++..+ .|..+..    +.+.+....++|+|
T Consensus        15 ~~~~~ilItGasG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~~----~~l~~~~~~~~d~v   89 (251)
T PLN00141         15 VKTKTVFVAGATGRTGKRIVEQLLAKGF-AVKAGVRDVDKAKTSLPQDPSLQIVRADVTEGS----DKLVEAIGDDSDAV   89 (251)
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHhCCC-EEEEEecCHHHHHHhcccCCceEEEEeeCCCCH----HHHHHHhhcCCCEE
Confidence            34679999997 9999999888888898 888888887765433221  23222 2333211    12222221268999


Q ss_pred             EEcccChH-------------hHHHHHHHhhCC-CceEEEEcCC
Q 018529          244 VECTGNID-------------NMISAFECVHDG-WGVAVLVGVP  273 (354)
Q Consensus       244 ~d~~g~~~-------------~~~~~~~~l~~~-~g~~v~~g~~  273 (354)
                      |.++|...             ....+++.+... .+++++++..
T Consensus        90 i~~~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~  133 (251)
T PLN00141         90 ICATGFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSI  133 (251)
T ss_pred             EECCCCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccc
Confidence            98876421             123444444432 2688887764

>PRK14103 trans-aconitate 2-methyltransferase; Provisional

Probab=96.00  E-value=0.11  Score=45.10  Aligned_cols=98  Identities=22%  Similarity=0.205  Sum_probs=68.4

Q ss_pred             hhhhcCCCCCCeEEEEcCChhHHHHHHHHHHc-CCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCC
Q 018529          161 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIA-GASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGG  239 (354)
Q Consensus       161 l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~-g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~  239 (354)
                      +.......++++||=+|+|. |..+..+++.. +. +|++++.+++-.+.+++.+++.+.    .+  .. .+  ...+.
T Consensus        21 ll~~l~~~~~~~vLDlGcG~-G~~~~~l~~~~p~~-~v~gvD~s~~~~~~a~~~~~~~~~----~d--~~-~~--~~~~~   89 (255)
T PRK14103         21 LLARVGAERARRVVDLGCGP-GNLTRYLARRWPGA-VIEALDSSPEMVAAARERGVDART----GD--VR-DW--KPKPD   89 (255)
T ss_pred             HHHhCCCCCCCEEEEEcCCC-CHHHHHHHHHCCCC-EEEEEECCHHHHHHHHhcCCcEEE----cC--hh-hC--CCCCC
Confidence            34556678889999999875 77777888875 45 899999999998888876654322    11  21 11  11237


Q ss_pred             ccEEEEccc-----C-hHhHHHHHHHhhCCCceEEEE
Q 018529          240 VDRSVECTG-----N-IDNMISAFECVHDGWGVAVLV  270 (354)
Q Consensus       240 ~dvv~d~~g-----~-~~~~~~~~~~l~~~~g~~v~~  270 (354)
                      ||+|+....     . ...+..+.+.|+++ |++++.
T Consensus        90 fD~v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~l~~~  125 (255)
T PRK14103         90 TDVVVSNAALQWVPEHADLLVRWVDELAPG-SWIAVQ  125 (255)
T ss_pred             ceEEEEehhhhhCCCHHHHHHHHHHhCCCC-cEEEEE
Confidence            999987442     2 34677888899997 998765

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=96.00  E-value=0.058  Score=46.81  Aligned_cols=79  Identities=23%  Similarity=0.270  Sum_probs=50.7

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH----HhcCCceE-E--cCCCCChhHHHHHHHHc--CC
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTDF-V--NTSEHDRPIQEVIAEMT--NG  238 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~----~~lg~~~v-~--~~~~~~~~~~~~i~~~~--~~  238 (354)
                      ++.++||+|+ |.+|...+..+...|+ +|+.+++++++.+.+    ++.+.... +  |..+. ..+.+.+.+..  .+
T Consensus         6 ~~~~vlItGasg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~~   83 (262)
T PRK13394          6 NGKTAVVTGAASGIGKEIALELARAGA-AVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNE-DAVNAGIDKVAERFG   83 (262)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCH-HHHHHHHHHHHHHcC
Confidence            4689999997 9999999999889999 888888888655433    33454322 1  22221 11222222221  13


Q ss_pred             CccEEEEcccC
Q 018529          239 GVDRSVECTGN  249 (354)
Q Consensus       239 ~~dvv~d~~g~  249 (354)
                      ++|+++.++|.
T Consensus        84 ~~d~vi~~ag~   94 (262)
T PRK13394         84 SVDILVSNAGI   94 (262)
T ss_pred             CCCEEEECCcc
Confidence            68999998874

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=96.00  E-value=0.13  Score=41.30  Aligned_cols=89  Identities=21%  Similarity=0.293  Sum_probs=58.5

Q ss_pred             eEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcccChH
Q 018529          172 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNID  251 (354)
Q Consensus       172 ~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~~~  251 (354)
                      +|-++|.|.+|...+.-+...|. .|.+.++++++.+.+.+.|+.. .+  +    ..+.+++     .|+||-|+...+
T Consensus         3 ~Ig~IGlG~mG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~~g~~~-~~--s----~~e~~~~-----~dvvi~~v~~~~   69 (163)
T PF03446_consen    3 KIGFIGLGNMGSAMARNLAKAGY-EVTVYDRSPEKAEALAEAGAEV-AD--S----PAEAAEQ-----ADVVILCVPDDD   69 (163)
T ss_dssp             EEEEE--SHHHHHHHHHHHHTTT-EEEEEESSHHHHHHHHHTTEEE-ES--S----HHHHHHH-----BSEEEE-SSSHH
T ss_pred             EEEEEchHHHHHHHHHHHHhcCC-eEEeeccchhhhhhhHHhhhhh-hh--h----hhhHhhc-----ccceEeecccch
Confidence            68889999999998888888899 8999999999999888877432 21  1    3333333     589999988765


Q ss_pred             hHHHHHH------HhhCCCceEEEEcCCC
Q 018529          252 NMISAFE------CVHDGWGVAVLVGVPS  274 (354)
Q Consensus       252 ~~~~~~~------~l~~~~g~~v~~g~~~  274 (354)
                      ..+..+.      .+.++ ..++.++...
T Consensus        70 ~v~~v~~~~~i~~~l~~g-~iiid~sT~~   97 (163)
T PF03446_consen   70 AVEAVLFGENILAGLRPG-KIIIDMSTIS   97 (163)
T ss_dssp             HHHHHHHCTTHGGGS-TT-EEEEE-SS--
T ss_pred             hhhhhhhhhHHhhccccc-eEEEecCCcc
Confidence            5555443      34454 5666665544

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>PRK06194 hypothetical protein; Provisional

Probab=96.00  E-value=0.054  Score=47.82  Aligned_cols=79  Identities=19%  Similarity=0.262  Sum_probs=49.8

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-Hhc---CCce-EE--cCCCCChhHHHHHHHHc--CC
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKF---GVTD-FV--NTSEHDRPIQEVIAEMT--NG  238 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~~l---g~~~-v~--~~~~~~~~~~~~i~~~~--~~  238 (354)
                      ++.++||+|+ |.+|...+..+...|+ +|+.++++.++.+.. .++   +... ++  |..+. .++.+.+....  .+
T Consensus         5 ~~k~vlVtGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~-~~~~~~~~~~~~~~g   82 (287)
T PRK06194          5 AGKVAVITGAASGFGLAFARIGAALGM-KLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDA-AQVEALADAALERFG   82 (287)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCH-HHHHHHHHHHHHHcC
Confidence            3578999987 9999999988888899 888898887654433 222   3321 12  22221 12322222221  13


Q ss_pred             CccEEEEcccC
Q 018529          239 GVDRSVECTGN  249 (354)
Q Consensus       239 ~~dvv~d~~g~  249 (354)
                      ++|++|+++|.
T Consensus        83 ~id~vi~~Ag~   93 (287)
T PRK06194         83 AVHLLFNNAGV   93 (287)
T ss_pred             CCCEEEECCCC
Confidence            68999999875

>PRK05884 short chain dehydrogenase; Provisional

Probab=95.99  E-value=0.067  Score=45.44  Aligned_cols=74  Identities=23%  Similarity=0.298  Sum_probs=48.9

Q ss_pred             eEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-HhcCCceE-EcCCCCChhHHHHHHHHcCCCccEEEEccc
Q 018529          172 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTDF-VNTSEHDRPIQEVIAEMTNGGVDRSVECTG  248 (354)
Q Consensus       172 ~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~~lg~~~v-~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g  248 (354)
                      +++|+|+ |.+|...++.+...|+ +|+.+++++++.+.+ ++++...+ .|..+. ..+.+.++++. +.+|+++++.|
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~-~~v~~~~~~~~-~~id~lv~~ag   78 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGH-KVTLVGARRDDLEVAAKELDVDAIVCDNTDP-ASLEEARGLFP-HHLDTIVNVPA   78 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCcEEecCCCCH-HHHHHHHHHHh-hcCcEEEECCC
Confidence            4899987 9999999988888899 888898988776644 44554322 233322 12333333332 25899998865

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.98  E-value=0.051  Score=47.10  Aligned_cols=79  Identities=16%  Similarity=0.327  Sum_probs=49.6

Q ss_pred             CCCeEEEEcCC---hhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCce--E--EcCCCCChhHHHHHHHHcC--CC
Q 018529          169 RGSSVAVFGLG---AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD--F--VNTSEHDRPIQEVIAEMTN--GG  239 (354)
Q Consensus       169 ~~~~vlI~G~g---~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~--v--~~~~~~~~~~~~~i~~~~~--~~  239 (354)
                      .++++||+|++   ++|.+.++.+...|+ +|+.+.++++..+.++++....  .  .|..+. .+..+.+.+...  +.
T Consensus         6 ~~k~~lItGas~~~gIG~a~a~~la~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~~g~   83 (252)
T PRK06079          6 SGKKIVVMGVANKRSIAWGCAQAIKDQGA-TVIYTYQNDRMKKSLQKLVDEEDLLVECDVASD-ESIERAFATIKERVGK   83 (252)
T ss_pred             CCCEEEEeCCCCCCchHHHHHHHHHHCCC-EEEEecCchHHHHHHHhhccCceeEEeCCCCCH-HHHHHHHHHHHHHhCC
Confidence            57899999864   899998888888999 8888888755444555542211  1  233322 122222222221  47


Q ss_pred             ccEEEEcccC
Q 018529          240 VDRSVECTGN  249 (354)
Q Consensus       240 ~dvv~d~~g~  249 (354)
                      +|++++++|.
T Consensus        84 iD~lv~nAg~   93 (252)
T PRK06079         84 IDGIVHAIAY   93 (252)
T ss_pred             CCEEEEcccc
Confidence            9999998873

>PRK06138 short chain dehydrogenase; Provisional

Probab=95.97  E-value=0.043  Score=47.31  Aligned_cols=79  Identities=22%  Similarity=0.263  Sum_probs=49.7

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH-hc--CCc-eEE--cCCCCChhHHHHHHHHc--CCC
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KF--GVT-DFV--NTSEHDRPIQEVIAEMT--NGG  239 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~-~l--g~~-~v~--~~~~~~~~~~~~i~~~~--~~~  239 (354)
                      ++.++||+|+ |.+|...++.+...|+ +|+.+.++.++.+... ++  +.. ..+  |..+. ..+.+.+.+..  .++
T Consensus         4 ~~k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~i~~~~~~   81 (252)
T PRK06138          4 AGRVAIVTGAGSGIGRATAKLFAREGA-RVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSA-EAVEALVDFVAARWGR   81 (252)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHCCC-eEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCH-HHHHHHHHHHHHHcCC
Confidence            4678999987 9999998888888898 8999988876554332 22  322 122  22221 12222222221  137


Q ss_pred             ccEEEEcccC
Q 018529          240 VDRSVECTGN  249 (354)
Q Consensus       240 ~dvv~d~~g~  249 (354)
                      +|+++.+.|.
T Consensus        82 id~vi~~ag~   91 (252)
T PRK06138         82 LDVLVNNAGF   91 (252)
T ss_pred             CCEEEECCCC
Confidence            9999999884

>PRK08643 acetoin reductase; Validated

Probab=95.96  E-value=0.047  Score=47.31  Aligned_cols=78  Identities=19%  Similarity=0.243  Sum_probs=50.0

Q ss_pred             CCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCce-E--EcCCCCChhHHHHHHHHc--CCC
Q 018529          170 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD-F--VNTSEHDRPIQEVIAEMT--NGG  239 (354)
Q Consensus       170 ~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~~-v--~~~~~~~~~~~~~i~~~~--~~~  239 (354)
                      ++++||+|+ |.+|...++.+...|+ +|+.++++.++.+.+.+    .+... .  .|..+.+ .+.+.+.+..  .++
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~~~   79 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGF-KVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRD-QVFAAVRQVVDTFGD   79 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHH-HHHHHHHHHHHHcCC
Confidence            568899987 9999999999888999 89999888776554322    23221 1  2222221 2223233322  147


Q ss_pred             ccEEEEcccC
Q 018529          240 VDRSVECTGN  249 (354)
Q Consensus       240 ~dvv~d~~g~  249 (354)
                      +|+++.++|.
T Consensus        80 id~vi~~ag~   89 (256)
T PRK08643         80 LNVVVNNAGV   89 (256)
T ss_pred             CCEEEECCCC
Confidence            8999998864

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=95.96  E-value=0.19  Score=44.19  Aligned_cols=110  Identities=12%  Similarity=0.053  Sum_probs=73.6

Q ss_pred             CCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcC-Cc----eEEcCCCCC--hhHHHHHHHHcCC
Q 018529          167 PERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG-VT----DFVNTSEHD--RPIQEVIAEMTNG  238 (354)
Q Consensus       167 ~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg-~~----~v~~~~~~~--~~~~~~i~~~~~~  238 (354)
                      .-+++.|+|+|| ++.|.+.+.-+...|. +|++..-+++..+.++..- ..    ..+|..+.+  ++..+.+++..+.
T Consensus        26 ~~~~k~VlITGCDSGfG~~LA~~L~~~Gf-~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~  104 (322)
T KOG1610|consen   26 SLSDKAVLITGCDSGFGRLLAKKLDKKGF-RVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGE  104 (322)
T ss_pred             ccCCcEEEEecCCcHHHHHHHHHHHhcCC-EEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhccc
Confidence            355677999999 9999998888889999 8888877777766665422 11    134554443  3455566666655


Q ss_pred             -CccEEEEcccCh--------------------------HhHHHHHHHhhCCCceEEEEcCCCCCc
Q 018529          239 -GVDRSVECTGNI--------------------------DNMISAFECVHDGWGVAVLVGVPSKDA  277 (354)
Q Consensus       239 -~~dvv~d~~g~~--------------------------~~~~~~~~~l~~~~g~~v~~g~~~~~~  277 (354)
                       +.=-+++++|..                          ......+..+++-.||+|.++...+..
T Consensus       105 ~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~GR~  170 (322)
T KOG1610|consen  105 DGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLGRV  170 (322)
T ss_pred             ccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEecccccCc
Confidence             777888888731                          223334445555459999998766543

>PLN00203 glutamyl-tRNA reductase

Probab=95.94  E-value=0.031  Score=53.46  Aligned_cols=73  Identities=21%  Similarity=0.302  Sum_probs=51.9

Q ss_pred             CCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH-hcC-Cce-EEcCCCCChhHHHHHHHHcCCCccEEEEc
Q 018529          170 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFG-VTD-FVNTSEHDRPIQEVIAEMTNGGVDRSVEC  246 (354)
Q Consensus       170 ~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~-~lg-~~~-v~~~~~~~~~~~~~i~~~~~~~~dvv~d~  246 (354)
                      +.+|+|+|+|.+|.+++..+...|...|+++.++.++.+.+. +++ ... +....+    ..+.+     ..+|+||.|
T Consensus       266 ~kkVlVIGAG~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~~~~~~d----l~~al-----~~aDVVIsA  336 (519)
T PLN00203        266 SARVLVIGAGKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEIIYKPLDE----MLACA-----AEADVVFTS  336 (519)
T ss_pred             CCEEEEEeCHHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceEeecHhh----HHHHH-----hcCCEEEEc
Confidence            689999999999999999999999878999999988876654 453 221 111111    22222     258999999


Q ss_pred             ccChH
Q 018529          247 TGNID  251 (354)
Q Consensus       247 ~g~~~  251 (354)
                      ++.+.
T Consensus       337 T~s~~  341 (519)
T PLN00203        337 TSSET  341 (519)
T ss_pred             cCCCC
Confidence            87643

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=95.93  E-value=0.048  Score=47.76  Aligned_cols=81  Identities=28%  Similarity=0.308  Sum_probs=53.5

Q ss_pred             CCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCc------eEEcCCCCC--hhHHHHHHH
Q 018529          168 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT------DFVNTSEHD--RPIQEVIAE  234 (354)
Q Consensus       168 ~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~------~v~~~~~~~--~~~~~~i~~  234 (354)
                      -.|+.+||+|+ .++|.+.+..+...|+ +|+.+.+++++.+...+    .+..      .+.|..+.+  +.+.+...+
T Consensus         6 l~gkvalVTG~s~GIG~aia~~la~~Ga-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~   84 (270)
T KOG0725|consen    6 LAGKVALVTGGSSGIGKAIALLLAKAGA-KVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVE   84 (270)
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHH
Confidence            46788999987 8999999999999999 89999899887655432    2221      222333221  122333333


Q ss_pred             HcCCCccEEEEcccC
Q 018529          235 MTNGGVDRSVECTGN  249 (354)
Q Consensus       235 ~~~~~~dvv~d~~g~  249 (354)
                      ...|+.|+.++..|.
T Consensus        85 ~~~GkidiLvnnag~   99 (270)
T KOG0725|consen   85 KFFGKIDILVNNAGA   99 (270)
T ss_pred             HhCCCCCEEEEcCCc
Confidence            333579999998775

>PLN02253 xanthoxin dehydrogenase

Probab=95.93  E-value=0.048  Score=48.02  Aligned_cols=79  Identities=19%  Similarity=0.217  Sum_probs=49.4

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-HhcCC--c-eE--EcCCCCChhHHHHHHHHcC--CC
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGV--T-DF--VNTSEHDRPIQEVIAEMTN--GG  239 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~~lg~--~-~v--~~~~~~~~~~~~~i~~~~~--~~  239 (354)
                      .+.++||+|+ |.+|...++.+...|+ +|+++++++++.+.+ .+++.  . ..  .|..+.+ .+.+.+.....  ++
T Consensus        17 ~~k~~lItGas~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~-~~~~~~~~~~~~~g~   94 (280)
T PLN02253         17 LGKVALVTGGATGIGESIVRLFHKHGA-KVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVED-DVSRAVDFTVDKFGT   94 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHH-HHHHHHHHHHHHhCC
Confidence            3678999987 9999998888888899 888888876654433 33321  1 11  2333321 22222222211  46


Q ss_pred             ccEEEEcccC
Q 018529          240 VDRSVECTGN  249 (354)
Q Consensus       240 ~dvv~d~~g~  249 (354)
                      +|++++++|.
T Consensus        95 id~li~~Ag~  104 (280)
T PLN02253         95 LDIMVNNAGL  104 (280)
T ss_pred             CCEEEECCCc
Confidence            9999998874

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=95.92  E-value=0.054  Score=48.86  Aligned_cols=78  Identities=22%  Similarity=0.324  Sum_probs=49.8

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-HhcC---Cc-eE--EcCCCCChhHHHHHHHHc--CC
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFG---VT-DF--VNTSEHDRPIQEVIAEMT--NG  238 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~~lg---~~-~v--~~~~~~~~~~~~~i~~~~--~~  238 (354)
                      ++.++||+|+ |++|...++.+...|+ +|+.++++.++.+.+ .++.   .. ..  .|..+.+ .+.+.+.++.  .+
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~-~v~~~~~~~~~~~~   82 (322)
T PRK07453          5 AKGTVIITGASSGVGLYAAKALAKRGW-HVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLD-SVRRFVDDFRALGK   82 (322)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHH-HHHHHHHHHHHhCC
Confidence            4678999987 9999999888888898 888888888775543 3332   11 11  2333221 1222232221  23


Q ss_pred             CccEEEEccc
Q 018529          239 GVDRSVECTG  248 (354)
Q Consensus       239 ~~dvv~d~~g  248 (354)
                      ++|++++++|
T Consensus        83 ~iD~li~nAg   92 (322)
T PRK07453         83 PLDALVCNAA   92 (322)
T ss_pred             CccEEEECCc
Confidence            6999999887

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=95.92  E-value=0.1  Score=47.33  Aligned_cols=34  Identities=38%  Similarity=0.485  Sum_probs=30.8

Q ss_pred             CCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCC
Q 018529          170 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS  203 (354)
Q Consensus       170 ~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~  203 (354)
                      ..+|+|+|+|++|...++.+-..|.++++.+|.+
T Consensus        24 ~~~VlVvG~GglGs~va~~La~aGvg~i~lvD~D   57 (339)
T PRK07688         24 EKHVLIIGAGALGTANAEMLVRAGVGKVTIVDRD   57 (339)
T ss_pred             CCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            4679999999999999999999999999999876

>PRK07063 short chain dehydrogenase; Provisional

Probab=95.91  E-value=0.05  Score=47.28  Aligned_cols=79  Identities=22%  Similarity=0.238  Sum_probs=50.6

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH-hc-----CCce-E--EcCCCCChhHHHHHHHHc--
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KF-----GVTD-F--VNTSEHDRPIQEVIAEMT--  236 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~-~l-----g~~~-v--~~~~~~~~~~~~~i~~~~--  236 (354)
                      .++++||+|+ |++|...+..+...|+ +|+.+++++++.+.+. ++     +... .  .|..+. .++.+.+.+..  
T Consensus         6 ~~k~vlVtGas~gIG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~   83 (260)
T PRK07063          6 AGKVALVTGAAQGIGAAIARAFAREGA-AVALADLDAALAERAAAAIARDVAGARVLAVPADVTDA-ASVAAAVAAAEEA   83 (260)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCH-HHHHHHHHHHHHH
Confidence            4678999987 9999999998888999 8888888877655432 22     2211 1  233222 12333333221  


Q ss_pred             CCCccEEEEcccC
Q 018529          237 NGGVDRSVECTGN  249 (354)
Q Consensus       237 ~~~~dvv~d~~g~  249 (354)
                      .+++|+++.++|.
T Consensus        84 ~g~id~li~~ag~   96 (260)
T PRK07063         84 FGPLDVLVNNAGI   96 (260)
T ss_pred             hCCCcEEEECCCc
Confidence            1479999999874

>PRK07904 short chain dehydrogenase; Provisional

Probab=95.91  E-value=0.083  Score=45.82  Aligned_cols=81  Identities=20%  Similarity=0.263  Sum_probs=49.8

Q ss_pred             CCCCCeEEEEcC-ChhHHHHHHHHHHcC-CcEEEEEcCChhh-HHH----HHhcCC-c-eE--EcCCCCChhHHHHHHHH
Q 018529          167 PERGSSVAVFGL-GAVGLAAAEGARIAG-ASRIIGVDRSSKR-FEE----AKKFGV-T-DF--VNTSEHDRPIQEVIAEM  235 (354)
Q Consensus       167 ~~~~~~vlI~G~-g~~G~~a~~~a~~~g-~~~vi~v~~~~~~-~~~----~~~lg~-~-~v--~~~~~~~~~~~~~i~~~  235 (354)
                      +..+.++||+|+ |++|...++.+...| + +|+.+++++++ .+.    +++.+. . .+  .|..+.+ ++.+.+++.
T Consensus         5 ~~~~~~vlItGas~giG~~la~~l~~~gg~-~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~-~~~~~~~~~   82 (253)
T PRK07904          5 VGNPQTILLLGGTSEIGLAICERYLKNAPA-RVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTD-SHPKVIDAA   82 (253)
T ss_pred             cCCCcEEEEEcCCcHHHHHHHHHHHhcCCC-eEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChH-HHHHHHHHH
Confidence            456789999987 999999887766664 7 88888888764 332    233332 1 12  2333322 233333333


Q ss_pred             cC-CCccEEEEcccC
Q 018529          236 TN-GGVDRSVECTGN  249 (354)
Q Consensus       236 ~~-~~~dvv~d~~g~  249 (354)
                      .. ++.|+++.++|.
T Consensus        83 ~~~g~id~li~~ag~   97 (253)
T PRK07904         83 FAGGDVDVAIVAFGL   97 (253)
T ss_pred             HhcCCCCEEEEeeec
Confidence            22 479999987765

>PRK05717 oxidoreductase; Validated

Probab=95.90  E-value=0.057  Score=46.78  Aligned_cols=79  Identities=20%  Similarity=0.254  Sum_probs=50.3

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-HhcCCce---EEcCCCCChhHHHHHHHHcC--CCcc
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTD---FVNTSEHDRPIQEVIAEMTN--GGVD  241 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~~lg~~~---v~~~~~~~~~~~~~i~~~~~--~~~d  241 (354)
                      .|.++||+|+ |.+|...+..+...|+ +|+.++++.++.+.+ ++++...   ..|..+. ..+.+.+.+...  +.+|
T Consensus         9 ~~k~vlItG~sg~IG~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~g~id   86 (255)
T PRK05717          9 NGRVALVTGAARGIGLGIAAWLIAEGW-QVVLADLDRERGSKVAKALGENAWFIAMDVADE-AQVAAGVAEVLGQFGRLD   86 (255)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHcCCceEEEEccCCCH-HHHHHHHHHHHHHhCCCC
Confidence            4678999987 9999998888888898 888888776654433 4444321   1233222 122222333221  3689


Q ss_pred             EEEEcccC
Q 018529          242 RSVECTGN  249 (354)
Q Consensus       242 vv~d~~g~  249 (354)
                      ++|.++|.
T Consensus        87 ~li~~ag~   94 (255)
T PRK05717         87 ALVCNAAI   94 (255)
T ss_pred             EEEECCCc
Confidence            99998874

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=95.90  E-value=0.046  Score=47.51  Aligned_cols=79  Identities=28%  Similarity=0.300  Sum_probs=50.1

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh---cCCce---EEcCCCCChhHHHHHHHHc--CCC
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK---FGVTD---FVNTSEHDRPIQEVIAEMT--NGG  239 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~---lg~~~---v~~~~~~~~~~~~~i~~~~--~~~  239 (354)
                      +++++||+|+ |.+|...++.+...|+ +|+.+++++...+..++   .+.+.   ..|..+.+ +..+.+.+..  .++
T Consensus         7 ~~k~vlVtGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~   84 (260)
T PRK12823          7 AGKVVVVTGAAQGIGRGVALRAAAEGA-RVVLVDRSELVHEVAAELRAAGGEALALTADLETYA-GAQAAMAAAVEAFGR   84 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHH-HHHHHHHHHHHHcCC
Confidence            4678999987 9999999998888999 88888887644333333   34322   23333321 2223333322  137


Q ss_pred             ccEEEEcccC
Q 018529          240 VDRSVECTGN  249 (354)
Q Consensus       240 ~dvv~d~~g~  249 (354)
                      +|+++.++|.
T Consensus        85 id~lv~nAg~   94 (260)
T PRK12823         85 IDVLINNVGG   94 (260)
T ss_pred             CeEEEECCcc
Confidence            9999998873

>PRK08226 short chain dehydrogenase; Provisional

Probab=95.90  E-value=0.055  Score=47.07  Aligned_cols=79  Identities=20%  Similarity=0.219  Sum_probs=49.9

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh---cCCce-E--EcCCCCChhHHHHHHHHc--CCC
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK---FGVTD-F--VNTSEHDRPIQEVIAEMT--NGG  239 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~---lg~~~-v--~~~~~~~~~~~~~i~~~~--~~~  239 (354)
                      ++.+++|+|+ |.+|...+..+...|+ +|+.++++++..+.+++   .+... .  .|..+. .++.+.+.+..  .+.
T Consensus         5 ~~~~~lItG~s~giG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~~~~   82 (263)
T PRK08226          5 TGKTALITGALQGIGEGIARVFARHGA-NLILLDISPEIEKLADELCGRGHRCTAVVADVRDP-ASVAAAIKRAKEKEGR   82 (263)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCH-HHHHHHHHHHHHHcCC
Confidence            4678999987 9999999998888999 89999888754444333   23221 1  222221 12222222221  136


Q ss_pred             ccEEEEcccC
Q 018529          240 VDRSVECTGN  249 (354)
Q Consensus       240 ~dvv~d~~g~  249 (354)
                      .|++|.+.|.
T Consensus        83 id~vi~~ag~   92 (263)
T PRK08226         83 IDILVNNAGV   92 (263)
T ss_pred             CCEEEECCCc
Confidence            8999998873

>PRK06701 short chain dehydrogenase; Provisional

Probab=95.90  E-value=0.18  Score=44.67  Aligned_cols=81  Identities=21%  Similarity=0.168  Sum_probs=47.9

Q ss_pred             CCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhh-H----HHHHhcCCce-E--EcCCCCChhHHHHHHHHc-
Q 018529          167 PERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR-F----EEAKKFGVTD-F--VNTSEHDRPIQEVIAEMT-  236 (354)
Q Consensus       167 ~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~-~----~~~~~lg~~~-v--~~~~~~~~~~~~~i~~~~-  236 (354)
                      .-++.++||+|+ |.+|...+..+...|+ +|+.+.++.++ .    +.++..+... .  .|..+.+ .+.+.+.+.. 
T Consensus        43 ~~~~k~iLItGasggIG~~la~~l~~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~i~~  120 (290)
T PRK06701         43 KLKGKVALITGGDSGIGRAVAVLFAKEGA-DIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEA-FCKDAVEETVR  120 (290)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHH-HHHHHHHHHHH
Confidence            345788999987 9999998888888899 78888776432 2    1222334322 2  2222221 2222232221 


Q ss_pred             -CCCccEEEEcccC
Q 018529          237 -NGGVDRSVECTGN  249 (354)
Q Consensus       237 -~~~~dvv~d~~g~  249 (354)
                       .+++|++|.++|.
T Consensus       121 ~~~~iD~lI~~Ag~  134 (290)
T PRK06701        121 ELGRLDILVNNAAF  134 (290)
T ss_pred             HcCCCCEEEECCcc
Confidence             1368999998774

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=95.89  E-value=0.24  Score=45.98  Aligned_cols=106  Identities=17%  Similarity=0.242  Sum_probs=62.0

Q ss_pred             cCCCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHH-------HHHhc-CCceE-EcCCCCChhHHHHHHH
Q 018529          165 AKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFE-------EAKKF-GVTDF-VNTSEHDRPIQEVIAE  234 (354)
Q Consensus       165 ~~~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~-------~~~~l-g~~~v-~~~~~~~~~~~~~i~~  234 (354)
                      ..-..+.+|||+|+ |.+|...+..+...|. .|++++++..+.+       ..... ++..+ .|..+. ..+.+.++.
T Consensus        55 ~~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~-~~l~~~~~~  132 (390)
T PLN02657         55 SKEPKDVTVLVVGATGYIGKFVVRELVRRGY-NVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDA-DSLRKVLFS  132 (390)
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCH-HHHHHHHHH
Confidence            34466789999987 9999999998888898 8888888765421       11112 33222 233322 123333333


Q ss_pred             HcCCCccEEEEcccChH------------hHHHHHHHhhCC-CceEEEEcCC
Q 018529          235 MTNGGVDRSVECTGNID------------NMISAFECVHDG-WGVAVLVGVP  273 (354)
Q Consensus       235 ~~~~~~dvv~d~~g~~~------------~~~~~~~~l~~~-~g~~v~~g~~  273 (354)
                      . .+++|+||+|++...            ....+++.+... .+++|+++..
T Consensus       133 ~-~~~~D~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~  183 (390)
T PLN02657        133 E-GDPVDVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAI  183 (390)
T ss_pred             h-CCCCcEEEECCccCCCCCccchhhHHHHHHHHHHHHHHcCCCEEEEEeec
Confidence            2 116999999886421            122334433332 2578887754

>PRK07035 short chain dehydrogenase; Provisional

Probab=95.89  E-value=0.055  Score=46.77  Aligned_cols=79  Identities=22%  Similarity=0.260  Sum_probs=50.1

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCc-eEE--cCCCCChhHHHHHHHHcC--C
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT-DFV--NTSEHDRPIQEVIAEMTN--G  238 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~-~v~--~~~~~~~~~~~~i~~~~~--~  238 (354)
                      ++.++||+|+ |.+|...++.+...|+ +|+.++++.++.+.+.+    .+.. ..+  +..+. .+..+.+++...  +
T Consensus         7 ~~k~vlItGas~gIG~~l~~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~   84 (252)
T PRK07035          7 TGKIALVTGASRGIGEAIAKLLAQQGA-HVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEM-EQIDALFAHIRERHG   84 (252)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCH-HHHHHHHHHHHHHcC
Confidence            3578999987 9999999999988999 89999988776554322    2322 122  22222 122222322211  3


Q ss_pred             CccEEEEcccC
Q 018529          239 GVDRSVECTGN  249 (354)
Q Consensus       239 ~~dvv~d~~g~  249 (354)
                      .+|+++.+.|.
T Consensus        85 ~id~li~~ag~   95 (252)
T PRK07035         85 RLDILVNNAAA   95 (252)
T ss_pred             CCCEEEECCCc
Confidence            68999998873

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=95.88  E-value=0.074  Score=48.18  Aligned_cols=35  Identities=34%  Similarity=0.441  Sum_probs=31.2

Q ss_pred             CCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCCh
Q 018529          170 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  204 (354)
Q Consensus       170 ~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~  204 (354)
                      ..+|+|+|+|++|...+..+-..|.++++.+|.+.
T Consensus        24 ~~~VlIiG~GglGs~va~~La~aGvg~i~lvD~D~   58 (338)
T PRK12475         24 EKHVLIVGAGALGAANAEALVRAGIGKLTIADRDY   58 (338)
T ss_pred             CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence            46799999999999999999999998999998764

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=95.88  E-value=0.065  Score=46.39  Aligned_cols=79  Identities=22%  Similarity=0.353  Sum_probs=49.8

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhh--HHHHHhcCCce-E--EcCCCCChhHHHHHHHHc--CCCc
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR--FEEAKKFGVTD-F--VNTSEHDRPIQEVIAEMT--NGGV  240 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~--~~~~~~lg~~~-v--~~~~~~~~~~~~~i~~~~--~~~~  240 (354)
                      +++++||+|+ +++|.+.++.+...|+ +|+.+.+++..  .+.+++.+... .  .|..+.+ ++.+.+.+..  .+++
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~g~i   84 (251)
T PRK12481          7 NGKVAIITGCNTGLGQGMAIGLAKAGA-DIVGVGVAEAPETQAQVEALGRKFHFITADLIQQK-DIDSIVSQAVEVMGHI   84 (251)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHH-HHHHHHHHHHHHcCCC
Confidence            4789999987 9999999998888999 88887765422  23344455432 1  2333322 2333333321  2479


Q ss_pred             cEEEEcccC
Q 018529          241 DRSVECTGN  249 (354)
Q Consensus       241 dvv~d~~g~  249 (354)
                      |+++++.|.
T Consensus        85 D~lv~~ag~   93 (251)
T PRK12481         85 DILINNAGI   93 (251)
T ss_pred             CEEEECCCc
Confidence            999998874

>TIGR00417 speE spermidine synthase

Probab=95.87  E-value=0.13  Score=45.19  Aligned_cols=98  Identities=18%  Similarity=0.129  Sum_probs=61.8

Q ss_pred             CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCC--------ceEEcCCCCChhHHHHHHHHcCCC
Q 018529          168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV--------TDFVNTSEHDRPIQEVIAEMTNGG  239 (354)
Q Consensus       168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~--------~~v~~~~~~~~~~~~~i~~~~~~~  239 (354)
                      +..++||++|+|. |..+..+++.....++++++.+++-.+.++++-.        .++ .....+  ..+.+++. .+.
T Consensus        71 ~~p~~VL~iG~G~-G~~~~~ll~~~~~~~v~~veid~~vi~~a~~~~~~~~~~~~~~~v-~i~~~D--~~~~l~~~-~~~  145 (270)
T TIGR00417        71 PNPKHVLVIGGGD-GGVLREVLKHKSVEKATLVDIDEKVIELSKKFLPSLAGSYDDPRV-DLQIDD--GFKFLADT-ENT  145 (270)
T ss_pred             CCCCEEEEEcCCc-hHHHHHHHhCCCcceEEEEeCCHHHHHHHHHHhHhhcccccCCce-EEEECc--hHHHHHhC-CCC
Confidence            3456999998865 5556666776655689999999888777766310        111 011111  33444432 348


Q ss_pred             ccEEEEccc----------ChHhHHHHHHHhhCCCceEEEEc
Q 018529          240 VDRSVECTG----------NIDNMISAFECVHDGWGVAVLVG  271 (354)
Q Consensus       240 ~dvv~d~~g----------~~~~~~~~~~~l~~~~g~~v~~g  271 (354)
                      +|+|+--..          ..+.++.+.+.|+++ |.++...
T Consensus       146 yDvIi~D~~~~~~~~~~l~~~ef~~~~~~~L~pg-G~lv~~~  186 (270)
T TIGR00417       146 FDVIIVDSTDPVGPAETLFTKEFYELLKKALNED-GIFVAQS  186 (270)
T ss_pred             ccEEEEeCCCCCCcccchhHHHHHHHHHHHhCCC-cEEEEcC
Confidence            999974322          234567888999998 9988763

the SpeE subunit of spermidine synthase catalysesthe reaction (putrescine + S-adenosylmethioninamine = spermidine + 5'-methylthioadenosine) and is involved in polyamine biosynthesis and in the biosynthesis of spermidine from arganine. The region between residues 77 and 120 of the seed alignment is thought to be involved in binding to decarboxylated SAM.

>PRK07856 short chain dehydrogenase; Provisional

Probab=95.87  E-value=0.044  Score=47.40  Aligned_cols=77  Identities=18%  Similarity=0.237  Sum_probs=47.8

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCce-EEcCCCCChhHHHHHHHHc--CCCccEEE
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD-FVNTSEHDRPIQEVIAEMT--NGGVDRSV  244 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~-v~~~~~~~~~~~~~i~~~~--~~~~dvv~  244 (354)
                      .++++||+|+ |.+|...++.+...|+ +|+.++++.++.  .....+.. ..|..+. ..+.+.+....  .+.+|++|
T Consensus         5 ~~k~~lItGas~gIG~~la~~l~~~g~-~v~~~~r~~~~~--~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~id~vi   80 (252)
T PRK07856          5 TGRVVLVTGGTRGIGAGIARAFLAAGA-TVVVCGRRAPET--VDGRPAEFHAADVRDP-DQVAALVDAIVERHGRLDVLV   80 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCChhhh--hcCCceEEEEccCCCH-HHHHHHHHHHHHHcCCCCEEE
Confidence            4789999987 9999999988888899 888888877651  11111111 1233222 12333332221  13689999


Q ss_pred             EcccC
Q 018529          245 ECTGN  249 (354)
Q Consensus       245 d~~g~  249 (354)
                      .++|.
T Consensus        81 ~~ag~   85 (252)
T PRK07856         81 NNAGG   85 (252)
T ss_pred             ECCCC
Confidence            98873

>PRK12367 short chain dehydrogenase; Provisional

Probab=95.87  E-value=0.075  Score=45.90  Aligned_cols=72  Identities=22%  Similarity=0.393  Sum_probs=46.1

Q ss_pred             CCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCCh-hhHHHHHhcCCceE--EcCCCCChhHHHHHHHHcCCCccEEEE
Q 018529          170 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS-KRFEEAKKFGVTDF--VNTSEHDRPIQEVIAEMTNGGVDRSVE  245 (354)
Q Consensus       170 ~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~-~~~~~~~~lg~~~v--~~~~~~~~~~~~~i~~~~~~~~dvv~d  245 (354)
                      +++++|+|+ |++|...++.+...|+ +|+++++++ ++.+.... +....  .|..+.     +.+.+.. +++|++++
T Consensus        14 ~k~~lITGas~gIG~ala~~l~~~G~-~Vi~~~r~~~~~~~~~~~-~~~~~~~~D~~~~-----~~~~~~~-~~iDilVn   85 (245)
T PRK12367         14 GKRIGITGASGALGKALTKAFRAKGA-KVIGLTHSKINNSESNDE-SPNEWIKWECGKE-----ESLDKQL-ASLDVLIL   85 (245)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEECCchhhhhhhcc-CCCeEEEeeCCCH-----HHHHHhc-CCCCEEEE
Confidence            578999987 9999999998888999 888888776 22222111 11122  233221     1233322 36999999


Q ss_pred             cccC
Q 018529          246 CTGN  249 (354)
Q Consensus       246 ~~g~  249 (354)
                      ++|.
T Consensus        86 nAG~   89 (245)
T PRK12367         86 NHGI   89 (245)
T ss_pred             CCcc
Confidence            9874

>PLN02244 tocopherol O-methyltransferase

Probab=95.87  E-value=0.052  Score=49.39  Aligned_cols=98  Identities=20%  Similarity=0.221  Sum_probs=63.8

Q ss_pred             CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhc----CCceEEcCCCCChhHHHHHHHHcCCCccEE
Q 018529          168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF----GVTDFVNTSEHDRPIQEVIAEMTNGGVDRS  243 (354)
Q Consensus       168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~l----g~~~v~~~~~~~~~~~~~i~~~~~~~~dvv  243 (354)
                      +++++||=+|+|. |..+..+++..|+ +|++++.+++..+.+++.    |...-+.+...+  ..+ + .+..+.||+|
T Consensus       117 ~~~~~VLDiGCG~-G~~~~~La~~~g~-~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~~D--~~~-~-~~~~~~FD~V  190 (340)
T PLN02244        117 KRPKRIVDVGCGI-GGSSRYLARKYGA-NVKGITLSPVQAARANALAAAQGLSDKVSFQVAD--ALN-Q-PFEDGQFDLV  190 (340)
T ss_pred             CCCCeEEEecCCC-CHHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcC--ccc-C-CCCCCCccEE
Confidence            7889999999874 6677888888788 999999999877766542    331101111111  100 0 1122479999


Q ss_pred             EEcccC------hHhHHHHHHHhhCCCceEEEEcC
Q 018529          244 VECTGN------IDNMISAFECVHDGWGVAVLVGV  272 (354)
Q Consensus       244 ~d~~g~------~~~~~~~~~~l~~~~g~~v~~g~  272 (354)
                      +.....      ...+..+.+.|+++ |++++...
T Consensus       191 ~s~~~~~h~~d~~~~l~e~~rvLkpG-G~lvi~~~  224 (340)
T PLN02244        191 WSMESGEHMPDKRKFVQELARVAAPG-GRIIIVTW  224 (340)
T ss_pred             EECCchhccCCHHHHHHHHHHHcCCC-cEEEEEEe
Confidence            864321      24677889999997 99987653

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=95.86  E-value=0.079  Score=44.62  Aligned_cols=35  Identities=23%  Similarity=0.308  Sum_probs=31.1

Q ss_pred             CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCC
Q 018529          169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS  203 (354)
Q Consensus       169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~  203 (354)
                      ...+|+|+|+|++|...++.+...|..+++.+|.+
T Consensus        27 ~~~~V~ViG~GglGs~ia~~La~~Gvg~i~lvD~D   61 (212)
T PRK08644         27 KKAKVGIAGAGGLGSNIAVALARSGVGNLKLVDFD   61 (212)
T ss_pred             hCCCEEEECcCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            34689999999999999999999999889999876

>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []

Probab=95.86  E-value=0.11  Score=39.74  Aligned_cols=93  Identities=17%  Similarity=0.288  Sum_probs=58.4

Q ss_pred             EEEEcC-ChhHHHHHHHHHHcC--CcEEEEEcCChhh---HHHHHhcCCceEEcCCCCC-hhHHH---------------
Q 018529          173 VAVFGL-GAVGLAAAEGARIAG--ASRIIGVDRSSKR---FEEAKKFGVTDFVNTSEHD-RPIQE---------------  230 (354)
Q Consensus       173 vlI~G~-g~~G~~a~~~a~~~g--~~~vi~v~~~~~~---~~~~~~lg~~~v~~~~~~~-~~~~~---------------  230 (354)
                      |.|+|+ |.+|..++.+.+...  . +|++.....+-   .+.+++|....+...++.. ..+.+               
T Consensus         1 i~ILGsTGSIG~qtLdVi~~~~d~f-~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~~~~~~~l~~~~~~~~~~~~v~~G~   79 (129)
T PF02670_consen    1 IAILGSTGSIGTQTLDVIRKHPDKF-EVVALSAGSNIEKLAEQAREFKPKYVVIADEEAYEELKKALPSKGPGIEVLSGP   79 (129)
T ss_dssp             EEEESTTSHHHHHHHHHHHHCTTTE-EEEEEEESSTHHHHHHHHHHHT-SEEEESSHHHHHHHHHHHHHTTSSSEEEESH
T ss_pred             CEEEcCCcHHHHHHHHHHHhCCCce-EEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHHhhhcCCCCEEEeCh
Confidence            578898 999999999999987  4 77777554433   2345678888777655432 11111               


Q ss_pred             -HHHHHcC-CCccEEEEcccChHhHHHHHHHhhCCCceE
Q 018529          231 -VIAEMTN-GGVDRSVECTGNIDNMISAFECVHDGWGVA  267 (354)
Q Consensus       231 -~i~~~~~-~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~  267 (354)
                       .+.++.. ..+|+|+.++.+...+.-.+..+..+ -++
T Consensus        80 ~~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~g-k~i  117 (129)
T PF02670_consen   80 EGLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKAG-KDI  117 (129)
T ss_dssp             HHHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHTT-SEE
T ss_pred             HHHHHHhcCCCCCEEEEeCcccchHHHHHHHHHCC-CeE
Confidence             1223333 37889988877767888888888874 443

In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....

>PRK12937 short chain dehydrogenase; Provisional

Probab=95.86  E-value=0.21  Score=42.77  Aligned_cols=79  Identities=18%  Similarity=0.178  Sum_probs=46.2

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCCh-hhHH----HHHhcCCce-EE--cCCCCChhHHHHHHHHc--C
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS-KRFE----EAKKFGVTD-FV--NTSEHDRPIQEVIAEMT--N  237 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~-~~~~----~~~~lg~~~-v~--~~~~~~~~~~~~i~~~~--~  237 (354)
                      ++.++||+|+ |.+|...+..+...|+ +++.+.++. ++.+    .+++.+... .+  |..+. ..+.+.+++..  .
T Consensus         4 ~~~~vlItG~~~~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~   81 (245)
T PRK12937          4 SNKVAIVTGASRGIGAAIARRLAADGF-AVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADA-AAVTRLFDAAETAF   81 (245)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCH-HHHHHHHHHHHHHc
Confidence            4678999987 9999999999999999 666655433 2222    223334321 22  22221 12222222221  1


Q ss_pred             CCccEEEEcccC
Q 018529          238 GGVDRSVECTGN  249 (354)
Q Consensus       238 ~~~dvv~d~~g~  249 (354)
                      +++|++|.++|.
T Consensus        82 ~~id~vi~~ag~   93 (245)
T PRK12937         82 GRIDVLVNNAGV   93 (245)
T ss_pred             CCCCEEEECCCC
Confidence            478999998874

>PRK06181 short chain dehydrogenase; Provisional

Probab=95.85  E-value=0.06  Score=46.85  Aligned_cols=78  Identities=26%  Similarity=0.372  Sum_probs=49.3

Q ss_pred             CCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH----HhcCCce-EE--cCCCCChhHHHHHHHHcC--CC
Q 018529          170 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-FV--NTSEHDRPIQEVIAEMTN--GG  239 (354)
Q Consensus       170 ~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~----~~lg~~~-v~--~~~~~~~~~~~~i~~~~~--~~  239 (354)
                      +.++||+|+ |.+|...++.+...|+ +|+++++++++.+.+    +..+... ++  |..+. ..+.+.+.+...  ++
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~~~   78 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGA-QLVLAARNETRLASLAQELADHGGEALVVPTDVSDA-EACERLIEAAVARFGG   78 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCH-HHHHHHHHHHHHHcCC
Confidence            357999987 9999999999889998 899998887664433    2234321 12  22221 123333333221  36


Q ss_pred             ccEEEEcccC
Q 018529          240 VDRSVECTGN  249 (354)
Q Consensus       240 ~dvv~d~~g~  249 (354)
                      +|+++.++|.
T Consensus        79 id~vi~~ag~   88 (263)
T PRK06181         79 IDILVNNAGI   88 (263)
T ss_pred             CCEEEECCCc
Confidence            8999999874

>TIGR03215 ac_ald_DH_ac acetaldehyde dehydrogenase (acetylating)

Probab=95.85  E-value=0.15  Score=44.83  Aligned_cols=91  Identities=20%  Similarity=0.259  Sum_probs=58.2

Q ss_pred             eEEEEcCChhHHHH-HHHHHHcCCcEEEE-EcCChhh--HHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcc
Q 018529          172 SVAVFGLGAVGLAA-AEGARIAGASRIIG-VDRSSKR--FEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  247 (354)
Q Consensus       172 ~vlI~G~g~~G~~a-~~~a~~~g~~~vi~-v~~~~~~--~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~  247 (354)
                      +|.|+|+|.+|... ..+....+. .+.+ ++.++++  +++++++|.......      +.+.+.   ...+|+||+++
T Consensus         3 rVAIIG~G~IG~~h~~~ll~~~~~-elvaV~d~d~es~~la~A~~~Gi~~~~~~------~e~ll~---~~dIDaV~iaT   72 (285)
T TIGR03215         3 KVAIIGSGNIGTDLMYKLLRSEHL-EMVAMVGIDPESDGLARARELGVKTSAEG------VDGLLA---NPDIDIVFDAT   72 (285)
T ss_pred             EEEEEeCcHHHHHHHHHHHhCCCc-EEEEEEeCCcccHHHHHHHHCCCCEEECC------HHHHhc---CCCCCEEEECC
Confidence            57899999999865 455554566 4444 4445544  567788887544321      222222   13699999999


Q ss_pred             cChHhHHHHHHHhhCCCceEEEEcCCC
Q 018529          248 GNIDNMISAFECVHDGWGVAVLVGVPS  274 (354)
Q Consensus       248 g~~~~~~~~~~~l~~~~g~~v~~g~~~  274 (354)
                      +...+.+.+..++..  |+.++...+.
T Consensus        73 p~~~H~e~a~~al~a--Gk~VIdekPa   97 (285)
T TIGR03215        73 SAKAHARHARLLAEL--GKIVIDLTPA   97 (285)
T ss_pred             CcHHHHHHHHHHHHc--CCEEEECCcc
Confidence            997777777777766  5666555443

Members of this protein family are acetaldehyde dehydrogenase (acetylating), EC 1.2.1.10. This enzyme oxidizes acetaldehyde, using NAD(+), and attaches coenzyme A (CoA), yielding acetyl-CoA. It occurs as a late step in the meta-cleavage pathways of a variety of compounds, including catechol, biphenyl, toluene, salicylate, etc.

>PRK05876 short chain dehydrogenase; Provisional

Probab=95.83  E-value=0.079  Score=46.60  Aligned_cols=79  Identities=20%  Similarity=0.247  Sum_probs=50.2

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH----HhcCCce-E--EcCCCCChhHHHHHHHHc--CC
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-F--VNTSEHDRPIQEVIAEMT--NG  238 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~----~~lg~~~-v--~~~~~~~~~~~~~i~~~~--~~  238 (354)
                      .++++||+|+ |++|...+..+...|+ +|+.+++++++.+.+    +..+... .  .|..+.+ ++.+.+.+..  .+
T Consensus         5 ~~k~vlVTGas~gIG~ala~~La~~G~-~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~-~v~~~~~~~~~~~g   82 (275)
T PRK05876          5 PGRGAVITGGASGIGLATGTEFARRGA-RVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHRE-EVTHLADEAFRLLG   82 (275)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHH-HHHHHHHHHHHHcC
Confidence            4678999987 9999999988888999 788888887665533    2234322 1  2332221 2222222221  13


Q ss_pred             CccEEEEcccC
Q 018529          239 GVDRSVECTGN  249 (354)
Q Consensus       239 ~~dvv~d~~g~  249 (354)
                      .+|++++++|.
T Consensus        83 ~id~li~nAg~   93 (275)
T PRK05876         83 HVDVVFSNAGI   93 (275)
T ss_pred             CCCEEEECCCc
Confidence            68999998873

>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot

Probab=95.83  E-value=0.2  Score=37.75  Aligned_cols=89  Identities=24%  Similarity=0.383  Sum_probs=61.9

Q ss_pred             eEEEEcCChhHHHHHHHHHHc--CCcEEE-EEcCChhhHHH-HHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcc
Q 018529          172 SVAVFGLGAVGLAAAEGARIA--GASRII-GVDRSSKRFEE-AKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  247 (354)
Q Consensus       172 ~vlI~G~g~~G~~a~~~a~~~--g~~~vi-~v~~~~~~~~~-~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~  247 (354)
                      ++.|+|+|.+|.....-++..  +. .++ ++++++++.+. .+++|.. .+  .+    +.+.+.+   ..+|+|+.++
T Consensus         2 ~v~iiG~G~~g~~~~~~~~~~~~~~-~v~~v~d~~~~~~~~~~~~~~~~-~~--~~----~~~ll~~---~~~D~V~I~t   70 (120)
T PF01408_consen    2 RVGIIGAGSIGRRHLRALLRSSPDF-EVVAVCDPDPERAEAFAEKYGIP-VY--TD----LEELLAD---EDVDAVIIAT   70 (120)
T ss_dssp             EEEEESTSHHHHHHHHHHHHTTTTE-EEEEEECSSHHHHHHHHHHTTSE-EE--SS----HHHHHHH---TTESEEEEES
T ss_pred             EEEEECCcHHHHHHHHHHHhcCCCc-EEEEEEeCCHHHHHHHHHHhccc-ch--hH----HHHHHHh---hcCCEEEEec
Confidence            578999999999887666655  44 444 55677776665 5668876 32  22    4333333   2699999999


Q ss_pred             cChHhHHHHHHHhhCCCceEEEEcCC
Q 018529          248 GNIDNMISAFECVHDGWGVAVLVGVP  273 (354)
Q Consensus       248 g~~~~~~~~~~~l~~~~g~~v~~g~~  273 (354)
                      +.....+.+..++..  |.-+++.-+
T Consensus        71 p~~~h~~~~~~~l~~--g~~v~~EKP   94 (120)
T PF01408_consen   71 PPSSHAEIAKKALEA--GKHVLVEKP   94 (120)
T ss_dssp             SGGGHHHHHHHHHHT--TSEEEEESS
T ss_pred             CCcchHHHHHHHHHc--CCEEEEEcC
Confidence            987888888888887  556667544

GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=95.83  E-value=0.083  Score=46.84  Aligned_cols=37  Identities=22%  Similarity=0.326  Sum_probs=31.8

Q ss_pred             CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCCh
Q 018529          168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  204 (354)
Q Consensus       168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~  204 (354)
                      -.+++++|+|+|++|.+++..+...|+++|+++.|+.
T Consensus       124 ~~~k~vlI~GAGGagrAia~~La~~G~~~V~I~~R~~  160 (289)
T PRK12548        124 VKGKKLTVIGAGGAATAIQVQCALDGAKEITIFNIKD  160 (289)
T ss_pred             cCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence            3567899999999999988888889997799998885

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=95.81  E-value=0.063  Score=46.34  Aligned_cols=76  Identities=22%  Similarity=0.345  Sum_probs=50.1

Q ss_pred             eEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh-cCCce-E--EcCCCCChhHHHHHHHHcC--CCccEEE
Q 018529          172 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTD-F--VNTSEHDRPIQEVIAEMTN--GGVDRSV  244 (354)
Q Consensus       172 ~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~-lg~~~-v--~~~~~~~~~~~~~i~~~~~--~~~dvv~  244 (354)
                      +++|+|+ |.+|...+..+...|+ +|+++++++++.+.+.+ ++... .  .|..+. ..+.+.+.+...  ++.|+++
T Consensus         2 ~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~i~~~~~~~~~~~~~id~vi   79 (248)
T PRK10538          2 IVLVTGATAGFGECITRRFIQQGH-KVIATGRRQERLQELKDELGDNLYIAQLDVRNR-AAIEEMLASLPAEWRNIDVLV   79 (248)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEEecCCCH-HHHHHHHHHHHHHcCCCCEEE
Confidence            5899987 9999999999888999 89999998887765533 34321 1  233222 123333333221  3689999


Q ss_pred             EcccC
Q 018529          245 ECTGN  249 (354)
Q Consensus       245 d~~g~  249 (354)
                      .++|.
T Consensus        80 ~~ag~   84 (248)
T PRK10538         80 NNAGL   84 (248)
T ss_pred             ECCCc
Confidence            98874

>PRK06197 short chain dehydrogenase; Provisional

Probab=95.81  E-value=0.068  Score=47.79  Aligned_cols=79  Identities=15%  Similarity=0.265  Sum_probs=49.3

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-Hhc-----CCc-eE--EcCCCCChhHHHHHHHHcC-
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKF-----GVT-DF--VNTSEHDRPIQEVIAEMTN-  237 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~~l-----g~~-~v--~~~~~~~~~~~~~i~~~~~-  237 (354)
                      .+.++||+|+ |++|...++.+...|+ +|+.+.++.++.+.+ +++     +.. ..  .|..+. ..+.+.+.++.. 
T Consensus        15 ~~k~vlItGas~gIG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~-~~v~~~~~~~~~~   92 (306)
T PRK06197         15 SGRVAVVTGANTGLGYETAAALAAKGA-HVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSL-ASVRAAADALRAA   92 (306)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCH-HHHHHHHHHHHhh
Confidence            5689999987 9999998888888899 888888887664432 111     111 11  232222 123333333321 


Q ss_pred             -CCccEEEEcccC
Q 018529          238 -GGVDRSVECTGN  249 (354)
Q Consensus       238 -~~~dvv~d~~g~  249 (354)
                       +++|++|.++|.
T Consensus        93 ~~~iD~li~nAg~  105 (306)
T PRK06197         93 YPRIDLLINNAGV  105 (306)
T ss_pred             CCCCCEEEECCcc
Confidence             368999998873

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=95.80  E-value=0.086  Score=45.79  Aligned_cols=76  Identities=26%  Similarity=0.381  Sum_probs=48.3

Q ss_pred             eEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH----hcCCceEE--cCCCCChhHHHHHHHHc--CCCccE
Q 018529          172 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTDFV--NTSEHDRPIQEVIAEMT--NGGVDR  242 (354)
Q Consensus       172 ~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~----~lg~~~v~--~~~~~~~~~~~~i~~~~--~~~~dv  242 (354)
                      ++||+|+ +++|...++.+...|+ +|+.+++++++.+.+.    +.+....+  |..+. .++.+.+++..  .+++|+
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~-~~~~~~~~~~~~~~g~id~   79 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGA-RVVISSRNEENLEKALKELKEYGEVYAVKADLSDK-DDLKNLVKEAWELLGGIDA   79 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCH-HHHHHHHHHHHHhcCCCCE
Confidence            6899987 9999998888888899 8999988887654432    22322222  22221 12333333322  247999


Q ss_pred             EEEcccC
Q 018529          243 SVECTGN  249 (354)
Q Consensus       243 v~d~~g~  249 (354)
                      +++++|.
T Consensus        80 li~naG~   86 (259)
T PRK08340         80 LVWNAGN   86 (259)
T ss_pred             EEECCCC
Confidence            9998874

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=95.80  E-value=0.081  Score=46.42  Aligned_cols=71  Identities=21%  Similarity=0.248  Sum_probs=48.6

Q ss_pred             CCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-HhcC---CceEEcCCCCChhHHHHHHHHcCCCccE
Q 018529          167 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFG---VTDFVNTSEHDRPIQEVIAEMTNGGVDR  242 (354)
Q Consensus       167 ~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~~lg---~~~v~~~~~~~~~~~~~i~~~~~~~~dv  242 (354)
                      ..++++++|+|+|++|.+.+..+...|. +|++++++.++.+.+ +++.   ......       +.+    .....+|+
T Consensus       114 ~~~~k~vliiGaGg~g~aia~~L~~~g~-~v~v~~R~~~~~~~la~~~~~~~~~~~~~-------~~~----~~~~~~Di  181 (270)
T TIGR00507       114 LRPNQRVLIIGAGGAARAVALPLLKADC-NVIIANRTVSKAEELAERFQRYGEIQAFS-------MDE----LPLHRVDL  181 (270)
T ss_pred             CccCCEEEEEcCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhcCceEEec-------hhh----hcccCccE
Confidence            3557899999999999998888888898 899999988775543 3332   211211       111    11125899


Q ss_pred             EEEcccC
Q 018529          243 SVECTGN  249 (354)
Q Consensus       243 v~d~~g~  249 (354)
                      |++|++.
T Consensus       182 vInatp~  188 (270)
T TIGR00507       182 IINATSA  188 (270)
T ss_pred             EEECCCC
Confidence            9999875

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=95.79  E-value=0.092  Score=45.13  Aligned_cols=35  Identities=31%  Similarity=0.443  Sum_probs=30.6

Q ss_pred             CCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCCh
Q 018529          170 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  204 (354)
Q Consensus       170 ~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~  204 (354)
                      +.+|+|+|+|++|..+++.+...|.++++.+|.+.
T Consensus        24 ~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~   58 (240)
T TIGR02355        24 ASRVLIVGLGGLGCAASQYLAAAGVGNLTLLDFDT   58 (240)
T ss_pred             CCcEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCc
Confidence            36899999999999999999999998998887543

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>PRK05875 short chain dehydrogenase; Provisional

Probab=95.79  E-value=0.066  Score=46.99  Aligned_cols=78  Identities=21%  Similarity=0.394  Sum_probs=50.1

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-Hhc---C--Cc-eEE--cCCCCChhHHHHHHHHcC-
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKF---G--VT-DFV--NTSEHDRPIQEVIAEMTN-  237 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~~l---g--~~-~v~--~~~~~~~~~~~~i~~~~~-  237 (354)
                      ++.++||+|+ |.+|...++.+...|+ +|+.++++.++.+.. +++   +  .. .++  |..+. ..+.+.+++... 
T Consensus         6 ~~k~vlItGasg~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~   83 (276)
T PRK05875          6 QDRTYLVTGGGSGIGKGVAAGLVAAGA-AVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDE-DQVARAVDAATAW   83 (276)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCH-HHHHHHHHHHHHH
Confidence            3679999997 9999999999999999 899998887665433 222   1  11 122  33222 123333333221 


Q ss_pred             -CCccEEEEccc
Q 018529          238 -GGVDRSVECTG  248 (354)
Q Consensus       238 -~~~dvv~d~~g  248 (354)
                       +++|++|.++|
T Consensus        84 ~~~~d~li~~ag   95 (276)
T PRK05875         84 HGRLHGVVHCAG   95 (276)
T ss_pred             cCCCCEEEECCC
Confidence             36899999887

>PRK07985 oxidoreductase; Provisional

Probab=95.77  E-value=0.16  Score=45.21  Aligned_cols=79  Identities=19%  Similarity=0.220  Sum_probs=47.3

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCCh--hhHHHH----HhcCCce-E--EcCCCCChhHHHHHHHHc--
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS--KRFEEA----KKFGVTD-F--VNTSEHDRPIQEVIAEMT--  236 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~--~~~~~~----~~lg~~~-v--~~~~~~~~~~~~~i~~~~--  236 (354)
                      +++++||+|+ |++|...++.+...|+ +|+.+.++.  ++.+.+    ++.+... .  .|..+. +.+.+.+.+..  
T Consensus        48 ~~k~vlITGas~gIG~aia~~L~~~G~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~  125 (294)
T PRK07985         48 KDRKALVTGGDSGIGRAAAIAYAREGA-DVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDE-KFARSLVHEAHKA  125 (294)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCH-HHHHHHHHHHHHH
Confidence            5678999987 9999999988888999 777775432  232222    2334322 1  233222 12333333322  


Q ss_pred             CCCccEEEEcccC
Q 018529          237 NGGVDRSVECTGN  249 (354)
Q Consensus       237 ~~~~dvv~d~~g~  249 (354)
                      .+++|+++.+.|.
T Consensus       126 ~g~id~lv~~Ag~  138 (294)
T PRK07985        126 LGGLDIMALVAGK  138 (294)
T ss_pred             hCCCCEEEECCCC
Confidence            1378999998763

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=95.77  E-value=0.089  Score=45.27  Aligned_cols=79  Identities=22%  Similarity=0.263  Sum_probs=50.3

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCc-eEEcCCCCC-hhHHHHHHHHcC--CC
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT-DFVNTSEHD-RPIQEVIAEMTN--GG  239 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~-~v~~~~~~~-~~~~~~i~~~~~--~~  239 (354)
                      ++.++||+|+ |.+|...+..+...|+ .|+.++++.++.+.+.+    .+.. .++..+-.+ ..+.+.++....  ++
T Consensus         2 ~~~~ilItGas~~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~   80 (250)
T TIGR03206         2 KDKTAIVTGGGGGIGGATCRRFAEEGA-KVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGP   80 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4678999987 9999999999888999 88888888776554422    2322 222222222 122233332221  36


Q ss_pred             ccEEEEccc
Q 018529          240 VDRSVECTG  248 (354)
Q Consensus       240 ~dvv~d~~g  248 (354)
                      +|++|.++|
T Consensus        81 ~d~vi~~ag   89 (250)
T TIGR03206        81 VDVLVNNAG   89 (250)
T ss_pred             CCEEEECCC
Confidence            899999987

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.77  E-value=0.082  Score=46.07  Aligned_cols=79  Identities=15%  Similarity=0.220  Sum_probs=47.8

Q ss_pred             CCCeEEEEcC-C--hhHHHHHHHHHHcCCcEEEEEcCChhhHHHH----HhcCCceE--EcCCCCChhHHHHHHHHcC--
Q 018529          169 RGSSVAVFGL-G--AVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTDF--VNTSEHDRPIQEVIAEMTN--  237 (354)
Q Consensus       169 ~~~~vlI~G~-g--~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~----~~lg~~~v--~~~~~~~~~~~~~i~~~~~--  237 (354)
                      .++++||+|+ +  ++|.+.++.+...|+ +|+.+.++++..+.+    +++|....  .|..+.+ +..+.+++...  
T Consensus         7 ~~k~~lITGas~~~GIG~a~a~~la~~G~-~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~-~v~~~~~~~~~~~   84 (260)
T PRK06603          7 QGKKGLITGIANNMSISWAIAQLAKKHGA-ELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPK-SISNLFDDIKEKW   84 (260)
T ss_pred             CCcEEEEECCCCCcchHHHHHHHHHHcCC-EEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHH-HHHHHHHHHHHHc
Confidence            5788999987 4  799998887778899 788777764322222    22343322  3443322 23333333222  


Q ss_pred             CCccEEEEcccC
Q 018529          238 GGVDRSVECTGN  249 (354)
Q Consensus       238 ~~~dvv~d~~g~  249 (354)
                      +.+|++++++|.
T Consensus        85 g~iDilVnnag~   96 (260)
T PRK06603         85 GSFDFLLHGMAF   96 (260)
T ss_pred             CCccEEEEcccc
Confidence            479999998763

>PLN03139 formate dehydrogenase; Provisional

Probab=95.76  E-value=0.1  Score=48.06  Aligned_cols=91  Identities=18%  Similarity=0.149  Sum_probs=62.5

Q ss_pred             CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEccc
Q 018529          169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  248 (354)
Q Consensus       169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g  248 (354)
                      .|.+|.|+|.|.||...++.++.+|. +|++.+++....+..+++|+..+   .  +  +.+.+.     ..|+|+.+.+
T Consensus       198 ~gktVGIVG~G~IG~~vA~~L~afG~-~V~~~d~~~~~~~~~~~~g~~~~---~--~--l~ell~-----~sDvV~l~lP  264 (386)
T PLN03139        198 EGKTVGTVGAGRIGRLLLQRLKPFNC-NLLYHDRLKMDPELEKETGAKFE---E--D--LDAMLP-----KCDVVVINTP  264 (386)
T ss_pred             CCCEEEEEeecHHHHHHHHHHHHCCC-EEEEECCCCcchhhHhhcCceec---C--C--HHHHHh-----hCCEEEEeCC
Confidence            57899999999999999999999999 89999887655555555664321   1  1  333332     2688887776


Q ss_pred             ChHhH-----HHHHHHhhCCCceEEEEcCC
Q 018529          249 NIDNM-----ISAFECVHDGWGVAVLVGVP  273 (354)
Q Consensus       249 ~~~~~-----~~~~~~l~~~~g~~v~~g~~  273 (354)
                      ..+..     ...++.|+++ ..+|.++..
T Consensus       265 lt~~T~~li~~~~l~~mk~g-a~lIN~aRG  293 (386)
T PLN03139        265 LTEKTRGMFNKERIAKMKKG-VLIVNNARG  293 (386)
T ss_pred             CCHHHHHHhCHHHHhhCCCC-eEEEECCCC
Confidence            43221     2456678886 777777653

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=95.76  E-value=0.072  Score=46.20  Aligned_cols=78  Identities=24%  Similarity=0.346  Sum_probs=50.8

Q ss_pred             CCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH-hcCCce-E--EcCCCCChhHHHHHHHHc--CCCccE
Q 018529          170 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTD-F--VNTSEHDRPIQEVIAEMT--NGGVDR  242 (354)
Q Consensus       170 ~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~-~lg~~~-v--~~~~~~~~~~~~~i~~~~--~~~~dv  242 (354)
                      +.++||+|+ |.+|...+..+...|+ +|+.++++.++.+.+. +++... .  .|..+.+ ...+.+++..  .+.+|+
T Consensus         6 ~~~vlItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~id~   83 (257)
T PRK07067          6 GKVALLTGAASGIGEAVAERYLAEGA-RVVIADIKPARARLAALEIGPAAIAVSLDVTRQD-SIDRIVAAAVERFGGIDI   83 (257)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHH-HHHHHHHHHHHHcCCCCE
Confidence            578999987 9999999999988999 8999999888765543 343221 1  2222221 2333333221  136899


Q ss_pred             EEEcccC
Q 018529          243 SVECTGN  249 (354)
Q Consensus       243 v~d~~g~  249 (354)
                      ++.+.|.
T Consensus        84 li~~ag~   90 (257)
T PRK07067         84 LFNNAAL   90 (257)
T ss_pred             EEECCCc
Confidence            9998763

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=95.76  E-value=0.14  Score=43.76  Aligned_cols=34  Identities=35%  Similarity=0.416  Sum_probs=30.0

Q ss_pred             CCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCC
Q 018529          170 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS  203 (354)
Q Consensus       170 ~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~  203 (354)
                      ..+|+|+|+|++|...+..+-..|.++++.+|.+
T Consensus        21 ~~~VlivG~GglGs~va~~La~~Gvg~i~lvD~D   54 (228)
T cd00757          21 NARVLVVGAGGLGSPAAEYLAAAGVGKLGLVDDD   54 (228)
T ss_pred             CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            4789999999999999999999999888888643

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.76  E-value=0.17  Score=43.91  Aligned_cols=78  Identities=17%  Similarity=0.305  Sum_probs=46.8

Q ss_pred             CCCeEEEEcC---ChhHHHHHHHHHHcCCcEEEEEcCCh---hhHHHH-Hhc-CCc-e--EEcCCCCChhHHHHHHHHcC
Q 018529          169 RGSSVAVFGL---GAVGLAAAEGARIAGASRIIGVDRSS---KRFEEA-KKF-GVT-D--FVNTSEHDRPIQEVIAEMTN  237 (354)
Q Consensus       169 ~~~~vlI~G~---g~~G~~a~~~a~~~g~~~vi~v~~~~---~~~~~~-~~l-g~~-~--v~~~~~~~~~~~~~i~~~~~  237 (354)
                      .+++++|+|+   +++|.+.++.+...|+ +|+.+.++.   ++.+.+ .++ +.. .  ..|..+. ....+.+++...
T Consensus         6 ~~k~~lItGa~~s~GIG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~-~~v~~~~~~~~~   83 (257)
T PRK08594          6 EGKTYVVMGVANKRSIAWGIARSLHNAGA-KLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSD-EEITACFETIKE   83 (257)
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCH-HHHHHHHHHHHH
Confidence            4688999986   5999998888888999 788776543   333333 333 221 1  1233332 223333333322


Q ss_pred             --CCccEEEEccc
Q 018529          238 --GGVDRSVECTG  248 (354)
Q Consensus       238 --~~~dvv~d~~g  248 (354)
                        +++|++++++|
T Consensus        84 ~~g~ld~lv~nag   96 (257)
T PRK08594         84 EVGVIHGVAHCIA   96 (257)
T ss_pred             hCCCccEEEECcc
Confidence              47999999876

>PRK06198 short chain dehydrogenase; Provisional

Probab=95.75  E-value=0.07  Score=46.32  Aligned_cols=80  Identities=24%  Similarity=0.302  Sum_probs=51.4

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHH----HHHhcCCce---EEcCCCCChhHHHHHHHHc--CC
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFE----EAKKFGVTD---FVNTSEHDRPIQEVIAEMT--NG  238 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~----~~~~lg~~~---v~~~~~~~~~~~~~i~~~~--~~  238 (354)
                      .+++++|+|+ |.+|...++.+...|++.|++++++.++.+    .+++.+...   ..|..+.+ .+.+.+....  .+
T Consensus         5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~g   83 (260)
T PRK06198          5 DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVE-DCRRVVAAADEAFG   83 (260)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHH-HHHHHHHHHHHHhC
Confidence            5688999987 999999999999999944999988876554    223344432   12333321 2223232221  13


Q ss_pred             CccEEEEcccC
Q 018529          239 GVDRSVECTGN  249 (354)
Q Consensus       239 ~~dvv~d~~g~  249 (354)
                      ++|+++++.|.
T Consensus        84 ~id~li~~ag~   94 (260)
T PRK06198         84 RLDALVNAAGL   94 (260)
T ss_pred             CCCEEEECCCc
Confidence            69999999874

>PRK07577 short chain dehydrogenase; Provisional

Probab=95.75  E-value=0.057  Score=46.03  Aligned_cols=74  Identities=23%  Similarity=0.281  Sum_probs=48.0

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCc-eEEcCCCCChhHHHHHHHHcCC-CccEEEE
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT-DFVNTSEHDRPIQEVIAEMTNG-GVDRSVE  245 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~-~v~~~~~~~~~~~~~i~~~~~~-~~dvv~d  245 (354)
                      +++++||+|+ |.+|...+..+...|. +|+++.++.++     .+... ...|..+.. .+.+.+.+.... +.|+++.
T Consensus         2 ~~k~vlItG~s~~iG~~ia~~l~~~G~-~v~~~~r~~~~-----~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~d~vi~   74 (234)
T PRK07577          2 SSRTVLVTGATKGIGLALSLRLANLGH-QVIGIARSAID-----DFPGELFACDLADIE-QTAATLAQINEIHPVDAIVN   74 (234)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCccc-----ccCceEEEeeCCCHH-HHHHHHHHHHHhCCCcEEEE
Confidence            3578999987 9999999988888998 89888887654     12211 122333321 233334333333 6899999


Q ss_pred             cccC
Q 018529          246 CTGN  249 (354)
Q Consensus       246 ~~g~  249 (354)
                      +.|.
T Consensus        75 ~ag~   78 (234)
T PRK07577         75 NVGI   78 (234)
T ss_pred             CCCC
Confidence            8874

>PRK08219 short chain dehydrogenase; Provisional

Probab=95.75  E-value=0.12  Score=43.68  Aligned_cols=74  Identities=20%  Similarity=0.227  Sum_probs=45.8

Q ss_pred             CeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh-cCCceEEcCCCCChhHHHHHHHHcC--CCccEEEEc
Q 018529          171 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTN--GGVDRSVEC  246 (354)
Q Consensus       171 ~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~-lg~~~v~~~~~~~~~~~~~i~~~~~--~~~dvv~d~  246 (354)
                      .++||+|+ |.+|...+..+... . +|++++++.++.+.+.+ +....++..+-.+.   +.+.++..  ++.|.++.+
T Consensus         4 ~~vlVtG~~g~iG~~l~~~l~~~-~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~---~~~~~~~~~~~~id~vi~~   78 (227)
T PRK08219          4 PTALITGASRGIGAAIARELAPT-H-TLLLGGRPAERLDELAAELPGATPFPVDLTDP---EAIAAAVEQLGRLDVLVHN   78 (227)
T ss_pred             CEEEEecCCcHHHHHHHHHHHhh-C-CEEEEeCCHHHHHHHHHHhccceEEecCCCCH---HHHHHHHHhcCCCCEEEEC
Confidence            57999987 99999877776666 6 89999998877655543 21112222211121   22332222  269999999


Q ss_pred             ccC
Q 018529          247 TGN  249 (354)
Q Consensus       247 ~g~  249 (354)
                      +|.
T Consensus        79 ag~   81 (227)
T PRK08219         79 AGV   81 (227)
T ss_pred             CCc
Confidence            874

>PRK05562 precorrin-2 dehydrogenase; Provisional

Probab=95.72  E-value=0.58  Score=39.52  Aligned_cols=116  Identities=12%  Similarity=0.057  Sum_probs=66.2

Q ss_pred             CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCCh-hhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcc
Q 018529          169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS-KRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  247 (354)
Q Consensus       169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~  247 (354)
                      ++.+|||+|+|.++.-=+..+...|+ +|++++..- +..+.+.+.|.-..+ -.+....      .+  .++++||-++
T Consensus        24 ~~~~VLVVGGG~VA~RK~~~Ll~~gA-~VtVVap~i~~el~~l~~~~~i~~~-~r~~~~~------dl--~g~~LViaAT   93 (223)
T PRK05562         24 NKIKVLIIGGGKAAFIKGKTFLKKGC-YVYILSKKFSKEFLDLKKYGNLKLI-KGNYDKE------FI--KDKHLIVIAT   93 (223)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCCCHHHHHHHhCCCEEEE-eCCCChH------Hh--CCCcEEEECC
Confidence            57799999999999988888888999 777774432 122222223322222 1221111      11  3689999999


Q ss_pred             cChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhhc-cccEEEEEe
Q 018529          248 GNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTF  296 (354)
Q Consensus       248 g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g~~  296 (354)
                      +.++.-+......+.. +.++..........+.+ +..+. ..+++.-+.
T Consensus        94 dD~~vN~~I~~~a~~~-~~lvn~vd~p~~~dFi~-PAiv~rg~l~IaIST  141 (223)
T PRK05562         94 DDEKLNNKIRKHCDRL-YKLYIDCSDYKKGLCII-PYQRSTKNFVFALNT  141 (223)
T ss_pred             CCHHHHHHHHHHHHHc-CCeEEEcCCcccCeEEe-eeEEecCCEEEEEEC
Confidence            8855555555555564 67776654433333333 33233 345554443

>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional

Probab=95.72  E-value=0.13  Score=45.04  Aligned_cols=104  Identities=17%  Similarity=0.180  Sum_probs=67.8

Q ss_pred             hhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCC--ceEEcCCCCChhHHHHHHHHcCC
Q 018529          161 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV--TDFVNTSEHDRPIQEVIAEMTNG  238 (354)
Q Consensus       161 l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~--~~v~~~~~~~~~~~~~i~~~~~~  238 (354)
                      +....+++++.+||=+|+|. |..+..+++..+. +|++++.+++..+.+++...  ..+ .....+  +.+  ..+..+
T Consensus        44 ~l~~l~l~~~~~VLDiGcG~-G~~a~~la~~~~~-~v~giD~s~~~~~~a~~~~~~~~~i-~~~~~D--~~~--~~~~~~  116 (263)
T PTZ00098         44 ILSDIELNENSKVLDIGSGL-GGGCKYINEKYGA-HVHGVDICEKMVNIAKLRNSDKNKI-EFEAND--ILK--KDFPEN  116 (263)
T ss_pred             HHHhCCCCCCCEEEEEcCCC-ChhhHHHHhhcCC-EEEEEECCHHHHHHHHHHcCcCCce-EEEECC--ccc--CCCCCC
Confidence            34567889999999999864 5566777777787 99999999988888776321  111 111111  110  011223


Q ss_pred             CccEEEEc--c---c---ChHhHHHHHHHhhCCCceEEEEcC
Q 018529          239 GVDRSVEC--T---G---NIDNMISAFECVHDGWGVAVLVGV  272 (354)
Q Consensus       239 ~~dvv~d~--~---g---~~~~~~~~~~~l~~~~g~~v~~g~  272 (354)
                      .||+|+..  .   +   ....+..+.+.|+|+ |++++...
T Consensus       117 ~FD~V~s~~~l~h~~~~d~~~~l~~i~r~LkPG-G~lvi~d~  157 (263)
T PTZ00098        117 TFDMIYSRDAILHLSYADKKKLFEKCYKWLKPN-GILLITDY  157 (263)
T ss_pred             CeEEEEEhhhHHhCCHHHHHHHHHHHHHHcCCC-cEEEEEEe
Confidence            79999862  1   1   124677888999997 99987754

>PRK06940 short chain dehydrogenase; Provisional

Probab=95.72  E-value=0.21  Score=43.91  Aligned_cols=77  Identities=27%  Similarity=0.385  Sum_probs=47.6

Q ss_pred             CCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-H---hcCCce-E--EcCCCCChhHHHHHHHHc-CCCcc
Q 018529          170 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-K---KFGVTD-F--VNTSEHDRPIQEVIAEMT-NGGVD  241 (354)
Q Consensus       170 ~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~---~lg~~~-v--~~~~~~~~~~~~~i~~~~-~~~~d  241 (354)
                      +++++|+|+|++|...+..+. .|. +|+.+++++++.+.+ +   ..|... .  .|..+.+ ++.+.+.+.. .+++|
T Consensus         2 ~k~~lItGa~gIG~~la~~l~-~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~-~i~~~~~~~~~~g~id   78 (275)
T PRK06940          2 KEVVVVIGAGGIGQAIARRVG-AGK-KVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRE-SVKALAATAQTLGPVT   78 (275)
T ss_pred             CCEEEEECCChHHHHHHHHHh-CCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHH-HHHHHHHHHHhcCCCC
Confidence            357888899999999888774 788 888888887665433 2   224321 1  2333322 2333333221 24799


Q ss_pred             EEEEcccC
Q 018529          242 RSVECTGN  249 (354)
Q Consensus       242 vv~d~~g~  249 (354)
                      ++++++|.
T Consensus        79 ~li~nAG~   86 (275)
T PRK06940         79 GLVHTAGV   86 (275)
T ss_pred             EEEECCCc
Confidence            99999874

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=95.71  E-value=0.094  Score=51.22  Aligned_cols=75  Identities=17%  Similarity=0.240  Sum_probs=57.4

Q ss_pred             CeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcccCh
Q 018529          171 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI  250 (354)
Q Consensus       171 ~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~~  250 (354)
                      ++++|.|.|.+|...++.++..|. .++++|.++++.+.+++.|...+.-. ..+   .+.+++..-+.+|.++-+++..
T Consensus       418 ~hiiI~G~G~~G~~la~~L~~~g~-~vvvId~d~~~~~~~~~~g~~~i~GD-~~~---~~~L~~a~i~~a~~viv~~~~~  492 (558)
T PRK10669        418 NHALLVGYGRVGSLLGEKLLAAGI-PLVVIETSRTRVDELRERGIRAVLGN-AAN---EEIMQLAHLDCARWLLLTIPNG  492 (558)
T ss_pred             CCEEEECCChHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHCCCeEEEcC-CCC---HHHHHhcCccccCEEEEEcCCh
Confidence            789999999999999999999998 89999999999999999887655432 222   2234444323789888777663

>PLN02589 caffeoyl-CoA O-methyltransferase

Probab=95.70  E-value=0.13  Score=44.23  Aligned_cols=103  Identities=18%  Similarity=0.184  Sum_probs=68.5

Q ss_pred             hcCCCCCCeEEEEcCChhHHHHHHHHHHcCC-cEEEEEcCChhhHHHHHh----cCCceEEcCCCCChhHHHHHHHHc--
Q 018529          164 VAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMT--  236 (354)
Q Consensus       164 ~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~-~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~~~--  236 (354)
                      ..+....++||=+|.+ +|+.++.+|+.++. .+|+.++.+++..+.+++    .|...-+.....+  ..+.+.++.  
T Consensus        74 l~~~~~ak~iLEiGT~-~GySal~la~al~~~g~v~tiE~~~~~~~~Ar~~~~~ag~~~~I~~~~G~--a~e~L~~l~~~  150 (247)
T PLN02589         74 LLKLINAKNTMEIGVY-TGYSLLATALALPEDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGP--ALPVLDQMIED  150 (247)
T ss_pred             HHHHhCCCEEEEEeCh-hhHHHHHHHhhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEecc--HHHHHHHHHhc
Confidence            3444556788888873 68888889987742 289999999988777654    5653333333333  555555543  


Q ss_pred             ---CCCccEEEEccc---ChHhHHHHHHHhhCCCceEEEE
Q 018529          237 ---NGGVDRSVECTG---NIDNMISAFECVHDGWGVAVLV  270 (354)
Q Consensus       237 ---~~~~dvv~d~~g---~~~~~~~~~~~l~~~~g~~v~~  270 (354)
                         .+.||.||--..   ....++.+++.|+++ |.++.=
T Consensus       151 ~~~~~~fD~iFiDadK~~Y~~y~~~~l~ll~~G-Gviv~D  189 (247)
T PLN02589        151 GKYHGTFDFIFVDADKDNYINYHKRLIDLVKVG-GVIGYD  189 (247)
T ss_pred             cccCCcccEEEecCCHHHhHHHHHHHHHhcCCC-eEEEEc
Confidence               247999974332   235678889999996 776643

>TIGR00563 rsmB ribosomal RNA small subunit methyltransferase RsmB

Probab=95.70  E-value=0.12  Score=48.66  Aligned_cols=105  Identities=14%  Similarity=0.223  Sum_probs=64.6

Q ss_pred             hhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH----hcCCce-EEcCCCCChhHHHHHHHHcC
Q 018529          163 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD-FVNTSEHDRPIQEVIAEMTN  237 (354)
Q Consensus       163 ~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~----~lg~~~-v~~~~~~~~~~~~~i~~~~~  237 (354)
                      ....+++|++||=+|+|+ |..++.++..++..+|++++.++++.+.++    ++|... +.....+...... .  ...
T Consensus       232 ~~L~~~~g~~VLDlcag~-G~kt~~la~~~~~~~v~a~D~~~~~l~~~~~n~~r~g~~~~v~~~~~d~~~~~~-~--~~~  307 (426)
T TIGR00563       232 TWLAPQNEETILDACAAP-GGKTTHILELAPQAQVVALDIHEHRLKRVYENLKRLGLTIKAETKDGDGRGPSQ-W--AEN  307 (426)
T ss_pred             HHhCCCCCCeEEEeCCCc-cHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeccccccccc-c--ccc
Confidence            445778999999888754 555556666655339999999999987764    467652 2111111100000 0  012


Q ss_pred             CCccEEEE---cccC-------------------------hHhHHHHHHHhhCCCceEEEEcC
Q 018529          238 GGVDRSVE---CTGN-------------------------IDNMISAFECVHDGWGVAVLVGV  272 (354)
Q Consensus       238 ~~~dvv~d---~~g~-------------------------~~~~~~~~~~l~~~~g~~v~~g~  272 (354)
                      +.||.||-   |+|.                         ...+..+++.|+++ |+++..-.
T Consensus       308 ~~fD~VllDaPcSg~G~~~~~p~~~~~~~~~~~~~l~~lQ~~lL~~a~~~Lkpg-G~lvystc  369 (426)
T TIGR00563       308 EQFDRILLDAPCSATGVIRRHPDIKWLRKPRDIAELAELQSEILDAIWPLLKTG-GTLVYATC  369 (426)
T ss_pred             cccCEEEEcCCCCCCcccccCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCC-cEEEEEeC
Confidence            36999974   3432                         24677788899997 99886643

The seed alignment is built from bacterial sequences only. Eukaryotic homologs include Nop2, a protein required for processing pre-rRNA, that is likely also a rRNA methyltransferase, although the fine specificity may differ. Cutoff scores are set to avoid treating archaeal and eukaroytic homologs automatically as functionally equivalent, although they may have very similar roles.

>PRK06125 short chain dehydrogenase; Provisional

Probab=95.69  E-value=0.14  Score=44.48  Aligned_cols=77  Identities=27%  Similarity=0.390  Sum_probs=50.7

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh-c----CCc-eE--EcCCCCChhHHHHHHHHcCCC
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-F----GVT-DF--VNTSEHDRPIQEVIAEMTNGG  239 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~-l----g~~-~v--~~~~~~~~~~~~~i~~~~~~~  239 (354)
                      .++++||+|+ |++|...++.+...|+ +|+++++++++.+.+.+ +    +.. ..  .|..+. ..+.+.+...  ++
T Consensus         6 ~~k~vlItG~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~-~~~~~~~~~~--g~   81 (259)
T PRK06125          6 AGKRVLITGASKGIGAAAAEAFAAEGC-HLHLVARDADALEALAADLRAAHGVDVAVHALDLSSP-EAREQLAAEA--GD   81 (259)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCH-HHHHHHHHHh--CC
Confidence            4689999987 9999999988888999 89999888876654322 2    321 12  222221 1233333322  47


Q ss_pred             ccEEEEcccC
Q 018529          240 VDRSVECTGN  249 (354)
Q Consensus       240 ~dvv~d~~g~  249 (354)
                      +|+++++.|.
T Consensus        82 id~lv~~ag~   91 (259)
T PRK06125         82 IDILVNNAGA   91 (259)
T ss_pred             CCEEEECCCC
Confidence            9999998874

>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional

Probab=95.68  E-value=0.15  Score=44.23  Aligned_cols=95  Identities=24%  Similarity=0.263  Sum_probs=61.8

Q ss_pred             CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCc-eEEcCCCCChhHHHHHHHHcCCCccE
Q 018529          168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT-DFVNTSEHDRPIQEVIAEMTNGGVDR  242 (354)
Q Consensus       168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~-~v~~~~~~~~~~~~~i~~~~~~~~dv  242 (354)
                      .++.+||-+|+|. |..+..+++. |. .|++++.+++..+.+++    .|.. .+. ....+  ..+ +.....+.+|+
T Consensus        43 ~~~~~vLDiGcG~-G~~a~~la~~-g~-~v~~vD~s~~~l~~a~~~~~~~g~~~~v~-~~~~d--~~~-l~~~~~~~fD~  115 (255)
T PRK11036         43 PRPLRVLDAGGGE-GQTAIKLAEL-GH-QVILCDLSAEMIQRAKQAAEAKGVSDNMQ-FIHCA--AQD-IAQHLETPVDL  115 (255)
T ss_pred             CCCCEEEEeCCCc-hHHHHHHHHc-CC-EEEEEECCHHHHHHHHHHHHhcCCccceE-EEEcC--HHH-HhhhcCCCCCE
Confidence            4567888888864 7778888875 76 99999999998887765    3321 111 11111  211 22233347999


Q ss_pred             EEEccc-----C-hHhHHHHHHHhhCCCceEEEE
Q 018529          243 SVECTG-----N-IDNMISAFECVHDGWGVAVLV  270 (354)
Q Consensus       243 v~d~~g-----~-~~~~~~~~~~l~~~~g~~v~~  270 (354)
                      |+....     . ...+..+.+.|+++ |+++++
T Consensus       116 V~~~~vl~~~~~~~~~l~~~~~~Lkpg-G~l~i~  148 (255)
T PRK11036        116 ILFHAVLEWVADPKSVLQTLWSVLRPG-GALSLM  148 (255)
T ss_pred             EEehhHHHhhCCHHHHHHHHHHHcCCC-eEEEEE
Confidence            986422     2 24578899999997 998765

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=95.68  E-value=0.073  Score=46.80  Aligned_cols=78  Identities=21%  Similarity=0.293  Sum_probs=49.7

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-H---hcCCc-eE--EcCCCCChhHHHHHHHHc--CC
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-K---KFGVT-DF--VNTSEHDRPIQEVIAEMT--NG  238 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~---~lg~~-~v--~~~~~~~~~~~~~i~~~~--~~  238 (354)
                      ++.+++|+|+ |.+|...+..+...|+ +|+.+++++++.+.+ +   +.+.. ..  .|..+. .++.+.+.+..  -+
T Consensus         9 ~~k~vlVtGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~~g   86 (278)
T PRK08277          9 KGKVAVITGGGGVLGGAMAKELARAGA-KVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDK-ESLEQARQQILEDFG   86 (278)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCH-HHHHHHHHHHHHHcC
Confidence            4688999987 9999999998888999 888888887655433 2   22332 11  222221 12222233222  14


Q ss_pred             CccEEEEccc
Q 018529          239 GVDRSVECTG  248 (354)
Q Consensus       239 ~~dvv~d~~g  248 (354)
                      ++|+++.++|
T Consensus        87 ~id~li~~ag   96 (278)
T PRK08277         87 PCDILINGAG   96 (278)
T ss_pred             CCCEEEECCC
Confidence            7999999987

>PRK06720 hypothetical protein; Provisional

Probab=95.67  E-value=0.13  Score=41.65  Aligned_cols=80  Identities=21%  Similarity=0.177  Sum_probs=48.2

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH----HhcCCce-EEcCCCCC-hhHHHHHHHHc--CCC
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-FVNTSEHD-RPIQEVIAEMT--NGG  239 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~----~~lg~~~-v~~~~~~~-~~~~~~i~~~~--~~~  239 (354)
                      ++..++|+|+ +++|...+..+...|+ +|+.++++.++.+..    .+.+... .+..+-.+ ..+.+.+.+..  -++
T Consensus        15 ~gk~~lVTGa~~GIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~   93 (169)
T PRK06720         15 AGKVAIVTGGGIGIGRNTALLLAKQGA-KVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSR   93 (169)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            4778999987 8899998888888898 898888877654332    2234322 22222111 12222222211  146


Q ss_pred             ccEEEEcccC
Q 018529          240 VDRSVECTGN  249 (354)
Q Consensus       240 ~dvv~d~~g~  249 (354)
                      .|++++++|.
T Consensus        94 iDilVnnAG~  103 (169)
T PRK06720         94 IDMLFQNAGL  103 (169)
T ss_pred             CCEEEECCCc
Confidence            8888888764

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.67  E-value=0.093  Score=45.74  Aligned_cols=79  Identities=20%  Similarity=0.313  Sum_probs=47.7

Q ss_pred             CCCeEEEEcC---ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCceE--EcCCCCChhHHHHHHHHcC--
Q 018529          169 RGSSVAVFGL---GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDF--VNTSEHDRPIQEVIAEMTN--  237 (354)
Q Consensus       169 ~~~~vlI~G~---g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~~v--~~~~~~~~~~~~~i~~~~~--  237 (354)
                      +++++||+|+   +++|.+.++.+...|+ +|+.+.++++..+.+++    ++....  .|..+. ++..+.+.+...  
T Consensus         5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~~~   82 (261)
T PRK08690          5 QGKKILITGMISERSIAYGIAKACREQGA-ELAFTYVVDKLEERVRKMAAELDSELVFRCDVASD-DEINQVFADLGKHW   82 (261)
T ss_pred             CCcEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCH-HHHHHHHHHHHHHh
Confidence            5678999984   5899998888888999 78777665433333333    343222  233322 223333333221  


Q ss_pred             CCccEEEEcccC
Q 018529          238 GGVDRSVECTGN  249 (354)
Q Consensus       238 ~~~dvv~d~~g~  249 (354)
                      +++|++++++|.
T Consensus        83 g~iD~lVnnAG~   94 (261)
T PRK08690         83 DGLDGLVHSIGF   94 (261)
T ss_pred             CCCcEEEECCcc
Confidence            479999998864

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=95.66  E-value=0.064  Score=42.99  Aligned_cols=79  Identities=28%  Similarity=0.344  Sum_probs=47.7

Q ss_pred             CeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCC--hhhHHHH----HhcCCce-EEcCCCCC-hhHHHHHHHHc--CCC
Q 018529          171 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRS--SKRFEEA----KKFGVTD-FVNTSEHD-RPIQEVIAEMT--NGG  239 (354)
Q Consensus       171 ~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~--~~~~~~~----~~lg~~~-v~~~~~~~-~~~~~~i~~~~--~~~  239 (354)
                      +++||+|+ +++|...++.+...|..+|+.+.++  .++.+.+    +..+... ++..+-.+ ..+.+.+.+..  .+.
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP   80 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            46899987 9999998777777777688888888  4433322    3345322 22211112 22333333332  237


Q ss_pred             ccEEEEcccC
Q 018529          240 VDRSVECTGN  249 (354)
Q Consensus       240 ~dvv~d~~g~  249 (354)
                      +|++|.+.|.
T Consensus        81 ld~li~~ag~   90 (167)
T PF00106_consen   81 LDILINNAGI   90 (167)
T ss_dssp             ESEEEEECSC
T ss_pred             cccccccccc
Confidence            9999998885

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK06914 short chain dehydrogenase; Provisional

Probab=95.66  E-value=0.1  Score=45.94  Aligned_cols=78  Identities=17%  Similarity=0.246  Sum_probs=49.7

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCC--c-eEE--cCCCCChhHHHHHHHHcC-
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGV--T-DFV--NTSEHDRPIQEVIAEMTN-  237 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~--~-~v~--~~~~~~~~~~~~i~~~~~-  237 (354)
                      .+.++||+|+ |.+|...+..+...|+ +|++++++.++.+.+.+    .+.  . .++  |..+. ..+.+ +.+... 
T Consensus         2 ~~k~~lItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~-~~~~~-~~~~~~~   78 (280)
T PRK06914          2 NKKIAIVTGASSGFGLLTTLELAKKGY-LVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQ-NSIHN-FQLVLKE   78 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCH-HHHHH-HHHHHHh
Confidence            3568999987 9999999988888899 88888888776554422    221  1 122  33322 12332 333221 


Q ss_pred             -CCccEEEEcccC
Q 018529          238 -GGVDRSVECTGN  249 (354)
Q Consensus       238 -~~~dvv~d~~g~  249 (354)
                       +++|+++.++|.
T Consensus        79 ~~~id~vv~~ag~   91 (280)
T PRK06914         79 IGRIDLLVNNAGY   91 (280)
T ss_pred             cCCeeEEEECCcc
Confidence             378999999874

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=95.66  E-value=0.51  Score=33.89  Aligned_cols=85  Identities=21%  Similarity=0.354  Sum_probs=52.9

Q ss_pred             eEEEEcCChhHHHHHHHHHHcC---CcEEE-EEcCChhhHHHH-HhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEc
Q 018529          172 SVAVFGLGAVGLAAAEGARIAG---ASRII-GVDRSSKRFEEA-KKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  246 (354)
Q Consensus       172 ~vlI~G~g~~G~~a~~~a~~~g---~~~vi-~v~~~~~~~~~~-~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~  246 (354)
                      +|.|+|+|.+|.+.+.-....|   . +|+ +.++++++.+.+ ++++..... . +    ..+.+++     .|+||-|
T Consensus         1 kI~iIG~G~mg~al~~~l~~~g~~~~-~v~~~~~r~~~~~~~~~~~~~~~~~~-~-~----~~~~~~~-----advvila   68 (96)
T PF03807_consen    1 KIGIIGAGNMGSALARGLLASGIKPH-EVIIVSSRSPEKAAELAKEYGVQATA-D-D----NEEAAQE-----ADVVILA   68 (96)
T ss_dssp             EEEEESTSHHHHHHHHHHHHTTS-GG-EEEEEEESSHHHHHHHHHHCTTEEES-E-E----HHHHHHH-----TSEEEE-
T ss_pred             CEEEECCCHHHHHHHHHHHHCCCCce-eEEeeccCcHHHHHHHHHhhcccccc-C-C----hHHhhcc-----CCEEEEE
Confidence            4678899999999888888888   5 677 548999988776 556643221 1 1    3333432     6999999


Q ss_pred             ccChHhHHHHHHH---hhCCCceEEEE
Q 018529          247 TGNIDNMISAFEC---VHDGWGVAVLV  270 (354)
Q Consensus       247 ~g~~~~~~~~~~~---l~~~~g~~v~~  270 (354)
                      +... .+...++.   ..++ ..++.+
T Consensus        69 v~p~-~~~~v~~~i~~~~~~-~~vis~   93 (96)
T PF03807_consen   69 VKPQ-QLPEVLSEIPHLLKG-KLVISI   93 (96)
T ss_dssp             S-GG-GHHHHHHHHHHHHTT-SEEEEE
T ss_pred             ECHH-HHHHHHHHHhhccCC-CEEEEe
Confidence            9764 33433333   4443 444443

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>TIGR00477 tehB tellurite resistance protein TehB

Probab=95.65  E-value=0.049  Score=45.24  Aligned_cols=98  Identities=14%  Similarity=0.107  Sum_probs=60.1

Q ss_pred             hhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCceEEcCCCCChhHHHHHHHHcCC
Q 018529          163 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTNG  238 (354)
Q Consensus       163 ~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~~~~~  238 (354)
                      +.....++.+||-+|+|. |..+..+++ .|. .|+++|.+++..+.+++    .+.....  ...+  +.+ . .. .+
T Consensus        24 ~~~~~~~~~~vLDiGcG~-G~~a~~la~-~g~-~V~~iD~s~~~l~~a~~~~~~~~~~v~~--~~~d--~~~-~-~~-~~   93 (195)
T TIGR00477        24 EAVKTVAPCKTLDLGCGQ-GRNSLYLSL-AGY-DVRAWDHNPASIASVLDMKARENLPLRT--DAYD--INA-A-AL-NE   93 (195)
T ss_pred             HHhccCCCCcEEEeCCCC-CHHHHHHHH-CCC-eEEEEECCHHHHHHHHHHHHHhCCCcee--Eecc--chh-c-cc-cC
Confidence            334445567899999864 777777776 477 99999999987776643    2332111  1111  100 0 11 23


Q ss_pred             CccEEEEccc-----C---hHhHHHHHHHhhCCCceEEEEc
Q 018529          239 GVDRSVECTG-----N---IDNMISAFECVHDGWGVAVLVG  271 (354)
Q Consensus       239 ~~dvv~d~~g-----~---~~~~~~~~~~l~~~~g~~v~~g  271 (354)
                      .+|+|+....     .   ...+..+.+.|+++ |.++++.
T Consensus        94 ~fD~I~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lli~~  133 (195)
T TIGR00477        94 DYDFIFSTVVFMFLQAGRVPEIIANMQAHTRPG-GYNLIVA  133 (195)
T ss_pred             CCCEEEEecccccCCHHHHHHHHHHHHHHhCCC-cEEEEEE
Confidence            6999986421     1   24677888899997 9865554

Part of a tellurite-reducing operon tehA and tehB

>PRK06114 short chain dehydrogenase; Provisional

Probab=95.64  E-value=0.098  Score=45.29  Aligned_cols=79  Identities=20%  Similarity=0.270  Sum_probs=48.7

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhh--HHH---HHhcCCce-EE--cCCCCChhHHHHHHHHc--C
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR--FEE---AKKFGVTD-FV--NTSEHDRPIQEVIAEMT--N  237 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~--~~~---~~~lg~~~-v~--~~~~~~~~~~~~i~~~~--~  237 (354)
                      ++.++||+|+ |++|...++.+...|+ +|+.++++.++  .+.   +++.+... .+  |..+. ..+.+.+.+..  .
T Consensus         7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~-~~i~~~~~~~~~~~   84 (254)
T PRK06114          7 DGQVAFVTGAGSGIGQRIAIGLAQAGA-DVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSK-ADLRAAVARTEAEL   84 (254)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCH-HHHHHHHHHHHHHc
Confidence            4678999987 9999999999988999 88888776432  222   23334321 12  22222 12333333322  1


Q ss_pred             CCccEEEEcccC
Q 018529          238 GGVDRSVECTGN  249 (354)
Q Consensus       238 ~~~dvv~d~~g~  249 (354)
                      +..|+++.+.|.
T Consensus        85 g~id~li~~ag~   96 (254)
T PRK06114         85 GALTLAVNAAGI   96 (254)
T ss_pred             CCCCEEEECCCC
Confidence            468999999874

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=95.64  E-value=0.12  Score=44.54  Aligned_cols=35  Identities=34%  Similarity=0.457  Sum_probs=30.5

Q ss_pred             CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCC
Q 018529          169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS  203 (354)
Q Consensus       169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~  203 (354)
                      ...+|+|+|+|++|..++..+...|.++++.+|.+
T Consensus        31 ~~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~D   65 (245)
T PRK05690         31 KAARVLVVGLGGLGCAASQYLAAAGVGTLTLVDFD   65 (245)
T ss_pred             cCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            34789999999999999999999999888888754

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=95.64  E-value=0.1  Score=40.40  Aligned_cols=34  Identities=29%  Similarity=0.443  Sum_probs=29.2

Q ss_pred             CCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCC
Q 018529          170 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS  203 (354)
Q Consensus       170 ~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~  203 (354)
                      ..+|+|+|+|++|...+..+-..|..+++.+|.+
T Consensus         2 ~~~v~iiG~G~vGs~va~~L~~~Gv~~i~lvD~d   35 (135)
T PF00899_consen    2 NKRVLIIGAGGVGSEVAKNLARSGVGKITLVDDD   35 (135)
T ss_dssp             T-EEEEESTSHHHHHHHHHHHHHTTSEEEEEESS
T ss_pred             CCEEEEECcCHHHHHHHHHHHHhCCCceeecCCc
Confidence            4689999999999999999999999889988753

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.64  E-value=0.11  Score=45.69  Aligned_cols=79  Identities=15%  Similarity=0.255  Sum_probs=49.5

Q ss_pred             CCCeEEEEcC---ChhHHHHHHHHHHcCCcEEEEEcCChh---hHHHH-HhcCCceE--EcCCCCChhHHHHHHHHcC--
Q 018529          169 RGSSVAVFGL---GAVGLAAAEGARIAGASRIIGVDRSSK---RFEEA-KKFGVTDF--VNTSEHDRPIQEVIAEMTN--  237 (354)
Q Consensus       169 ~~~~vlI~G~---g~~G~~a~~~a~~~g~~~vi~v~~~~~---~~~~~-~~lg~~~v--~~~~~~~~~~~~~i~~~~~--  237 (354)
                      .++++||+|+   +++|.+.++.+...|+ +|+.++++++   +.+.+ ++++....  .|..+.+ .+.+.+.+...  
T Consensus         4 ~~k~~lItGas~~~GIG~aiA~~la~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~-~v~~~~~~i~~~~   81 (274)
T PRK08415          4 KGKKGLIVGVANNKSIAYGIAKACFEQGA-ELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPE-HFKSLAESLKKDL   81 (274)
T ss_pred             CCcEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHH-HHHHHHHHHHHHc
Confidence            4689999986   4899998888888999 8888888753   22222 34453322  3443322 23333333222  


Q ss_pred             CCccEEEEcccC
Q 018529          238 GGVDRSVECTGN  249 (354)
Q Consensus       238 ~~~dvv~d~~g~  249 (354)
                      +.+|++++++|.
T Consensus        82 g~iDilVnnAG~   93 (274)
T PRK08415         82 GKIDFIVHSVAF   93 (274)
T ss_pred             CCCCEEEECCcc
Confidence            479999999874

>PRK08251 short chain dehydrogenase; Provisional

Probab=95.63  E-value=0.09  Score=45.24  Aligned_cols=77  Identities=26%  Similarity=0.459  Sum_probs=48.7

Q ss_pred             CCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----c--CCc-eE--EcCCCCChhHHHHHHHHcC--
Q 018529          170 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----F--GVT-DF--VNTSEHDRPIQEVIAEMTN--  237 (354)
Q Consensus       170 ~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----l--g~~-~v--~~~~~~~~~~~~~i~~~~~--  237 (354)
                      ++++||+|+ |.+|...+..+...|. +|+.+++++++.+.+.+    .  +.. .+  .|..+. ..+.+.+.++..  
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~   79 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGR-DLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDH-DQVFEVFAEFRDEL   79 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCH-HHHHHHHHHHHHHc
Confidence            468999987 9999988877777898 88888888876654422    1  221 12  233332 123333333221  


Q ss_pred             CCccEEEEccc
Q 018529          238 GGVDRSVECTG  248 (354)
Q Consensus       238 ~~~dvv~d~~g  248 (354)
                      ++.|+++.++|
T Consensus        80 ~~id~vi~~ag   90 (248)
T PRK08251         80 GGLDRVIVNAG   90 (248)
T ss_pred             CCCCEEEECCC
Confidence            37899999886

>PRK07074 short chain dehydrogenase; Provisional

Probab=95.63  E-value=0.091  Score=45.53  Aligned_cols=78  Identities=22%  Similarity=0.311  Sum_probs=49.0

Q ss_pred             CCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH-hcCCc--eE--EcCCCCChhHHHHHHHHc--CCCcc
Q 018529          170 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVT--DF--VNTSEHDRPIQEVIAEMT--NGGVD  241 (354)
Q Consensus       170 ~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~-~lg~~--~v--~~~~~~~~~~~~~i~~~~--~~~~d  241 (354)
                      ++++||+|+ |.+|...+..+...|+ +|++++++.++.+.+. ++...  ..  .|..+.+ .+.+.+.+..  .+++|
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~~d   79 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGD-RVLALDIDAAALAAFADALGDARFVPVACDLTDAA-SLAAALANAAAERGPVD   79 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHH-HHHHHHHHHHHHcCCCC
Confidence            468999987 9999998888888898 8999988887765443 23211  12  2222211 1222333221  13689


Q ss_pred             EEEEcccC
Q 018529          242 RSVECTGN  249 (354)
Q Consensus       242 vv~d~~g~  249 (354)
                      +++.+.|.
T Consensus        80 ~vi~~ag~   87 (257)
T PRK07074         80 VLVANAGA   87 (257)
T ss_pred             EEEECCCC
Confidence            99999874

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=95.63  E-value=0.099  Score=45.57  Aligned_cols=80  Identities=21%  Similarity=0.254  Sum_probs=50.7

Q ss_pred             CCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhh----HHHHHhcCC--ceEEcCCCCC--hhHHHHHHHHcCC
Q 018529          168 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR----FEEAKKFGV--TDFVNTSEHD--RPIQEVIAEMTNG  238 (354)
Q Consensus       168 ~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~----~~~~~~lg~--~~v~~~~~~~--~~~~~~i~~~~~~  238 (354)
                      -+|+.|||+|+ +++|.+.++=.-.+|+ +++..|.+++.    .+..++.|-  .+..|..+.+  ....+++++-. |
T Consensus        36 v~g~~vLITGgg~GlGr~ialefa~rg~-~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~-G  113 (300)
T KOG1201|consen   36 VSGEIVLITGGGSGLGRLIALEFAKRGA-KLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEV-G  113 (300)
T ss_pred             ccCCEEEEeCCCchHHHHHHHHHHHhCC-eEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhc-C
Confidence            46899999987 8999886666666777 77777766543    334444452  2344444432  22344444433 3


Q ss_pred             CccEEEEcccC
Q 018529          239 GVDRSVECTGN  249 (354)
Q Consensus       239 ~~dvv~d~~g~  249 (354)
                      .+|++++.+|.
T Consensus       114 ~V~ILVNNAGI  124 (300)
T KOG1201|consen  114 DVDILVNNAGI  124 (300)
T ss_pred             CceEEEecccc
Confidence            78999998884

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=95.63  E-value=0.11  Score=44.98  Aligned_cols=79  Identities=22%  Similarity=0.288  Sum_probs=48.5

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChh--hHHHHHhcCCce-E--EcCCCCChhHHHHHHHHc--CCCc
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSK--RFEEAKKFGVTD-F--VNTSEHDRPIQEVIAEMT--NGGV  240 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~--~~~~~~~lg~~~-v--~~~~~~~~~~~~~i~~~~--~~~~  240 (354)
                      .+.++||+|+ |++|.+.++.+...|+ +|+.+++++.  ..+.+++++... .  .|..+. .++.+.+.+..  .+++
T Consensus         9 ~~k~~lItG~~~gIG~a~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~~~~   86 (253)
T PRK08993          9 EGKVAVVTGCDTGLGQGMALGLAEAGC-DIVGINIVEPTETIEQVTALGRRFLSLTADLRKI-DGIPALLERAVAEFGHI   86 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEecCcchHHHHHHHHhcCCeEEEEECCCCCH-HHHHHHHHHHHHHhCCC
Confidence            3679999987 9999999999888999 8888765432  223344444321 1  222221 12323233221  1378


Q ss_pred             cEEEEcccC
Q 018529          241 DRSVECTGN  249 (354)
Q Consensus       241 dvv~d~~g~  249 (354)
                      |++++++|.
T Consensus        87 D~li~~Ag~   95 (253)
T PRK08993         87 DILVNNAGL   95 (253)
T ss_pred             CEEEECCCC
Confidence            999999874

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=95.63  E-value=0.095  Score=45.36  Aligned_cols=79  Identities=22%  Similarity=0.321  Sum_probs=50.9

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH----HhcCCce-E--EcCCCCChhHHHHHHHHcC--C
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-F--VNTSEHDRPIQEVIAEMTN--G  238 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~----~~lg~~~-v--~~~~~~~~~~~~~i~~~~~--~  238 (354)
                      ++.+++|+|+ |.+|...+..+...|+ +|+.+++++++.+.+    ++.+... .  .|..+. ..+.+.+.+...  +
T Consensus        10 ~~k~ilItGas~~IG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~~   87 (256)
T PRK06124         10 AGQVALVTGSARGLGFEIARALAGAGA-HVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADE-EAVAAAFARIDAEHG   87 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCH-HHHHHHHHHHHHhcC
Confidence            5789999987 9999998888888899 899998987665432    2334321 2  233222 123333333221  3


Q ss_pred             CccEEEEcccC
Q 018529          239 GVDRSVECTGN  249 (354)
Q Consensus       239 ~~dvv~d~~g~  249 (354)
                      ++|+++.++|.
T Consensus        88 ~id~vi~~ag~   98 (256)
T PRK06124         88 RLDILVNNVGA   98 (256)
T ss_pred             CCCEEEECCCC
Confidence            68999998874

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=95.62  E-value=0.097  Score=46.89  Aligned_cols=90  Identities=17%  Similarity=0.272  Sum_probs=59.8

Q ss_pred             CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcc
Q 018529          168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  247 (354)
Q Consensus       168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~  247 (354)
                      -.|.+|.|+|.|.+|...++.++.+|. +|++.+++.++.+     +.....  ...  ++.+.++     ..|+|+.+.
T Consensus       134 l~g~tvgIvG~G~IG~~vA~~l~afG~-~V~~~~~~~~~~~-----~~~~~~--~~~--~l~e~l~-----~aDvvv~~l  198 (312)
T PRK15469        134 REDFTIGILGAGVLGSKVAQSLQTWGF-PLRCWSRSRKSWP-----GVQSFA--GRE--ELSAFLS-----QTRVLINLL  198 (312)
T ss_pred             cCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCCCCCC-----Cceeec--ccc--cHHHHHh-----cCCEEEECC
Confidence            357899999999999999999999999 8999987654321     222111  111  1333332     379998887


Q ss_pred             cChHh----H-HHHHHHhhCCCceEEEEcCC
Q 018529          248 GNIDN----M-ISAFECVHDGWGVAVLVGVP  273 (354)
Q Consensus       248 g~~~~----~-~~~~~~l~~~~g~~v~~g~~  273 (354)
                      +..+.    + ...++.|+++ ..++.++..
T Consensus       199 Plt~~T~~li~~~~l~~mk~g-a~lIN~aRG  228 (312)
T PRK15469        199 PNTPETVGIINQQLLEQLPDG-AYLLNLARG  228 (312)
T ss_pred             CCCHHHHHHhHHHHHhcCCCC-cEEEECCCc
Confidence            64332    2 2466778886 888877754

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=95.62  E-value=0.094  Score=45.38  Aligned_cols=79  Identities=24%  Similarity=0.355  Sum_probs=50.2

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-H---hcCCce-EE--cCCCCChhHHHHHHHHc--CC
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-K---KFGVTD-FV--NTSEHDRPIQEVIAEMT--NG  238 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~---~lg~~~-v~--~~~~~~~~~~~~i~~~~--~~  238 (354)
                      .++++||+|+ |++|...+..+...|+ +|+.++++.++.+.+ .   ..+... .+  |..+. ..+.+.+....  .+
T Consensus         8 ~~k~~lItGas~giG~~ia~~L~~~G~-~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~~   85 (254)
T PRK08085          8 AGKNILITGSAQGIGFLLATGLAEYGA-EIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHK-QEVEAAIEHIEKDIG   85 (254)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCH-HHHHHHHHHHHHhcC
Confidence            4678999987 9999999988888999 898998887665433 2   223221 22  22222 12222222221  13


Q ss_pred             CccEEEEcccC
Q 018529          239 GVDRSVECTGN  249 (354)
Q Consensus       239 ~~dvv~d~~g~  249 (354)
                      ++|+++.+.|.
T Consensus        86 ~id~vi~~ag~   96 (254)
T PRK08085         86 PIDVLINNAGI   96 (254)
T ss_pred             CCCEEEECCCc
Confidence            68999999874

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=95.61  E-value=0.09  Score=45.07  Aligned_cols=79  Identities=22%  Similarity=0.251  Sum_probs=50.2

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-HhcCCc-eEE--cCCCCChhHHHHHHHHc--CCCcc
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVT-DFV--NTSEHDRPIQEVIAEMT--NGGVD  241 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~~lg~~-~v~--~~~~~~~~~~~~i~~~~--~~~~d  241 (354)
                      ++.++||+|+ |.+|...+..+...|+ .|+..+++.++.+.+ .+++.. .++  |..+. ..+.+.+.+..  -+++|
T Consensus         5 ~~~~vlItGa~g~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~id   82 (245)
T PRK12936          5 SGRKALVTGASGGIGEEIARLLHAQGA-IVGLHGTRVEKLEALAAELGERVKIFPANLSDR-DEVKALGQKAEADLEGVD   82 (245)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCCH-HHHHHHHHHHHHHcCCCC
Confidence            4679999987 9999998888888898 888887877766544 334432 122  22221 12222222221  13799


Q ss_pred             EEEEcccC
Q 018529          242 RSVECTGN  249 (354)
Q Consensus       242 vv~d~~g~  249 (354)
                      +++.++|.
T Consensus        83 ~vi~~ag~   90 (245)
T PRK12936         83 ILVNNAGI   90 (245)
T ss_pred             EEEECCCC
Confidence            99999874

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=95.61  E-value=0.099  Score=46.26  Aligned_cols=36  Identities=22%  Similarity=0.407  Sum_probs=30.4

Q ss_pred             CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCCh
Q 018529          169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  204 (354)
Q Consensus       169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~  204 (354)
                      +++++||+|+|+.+.+++..+...|+.+++++.|++
T Consensus       123 ~~k~vlvlGaGGaarAi~~~l~~~g~~~i~i~nRt~  158 (288)
T PRK12749        123 KGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRD  158 (288)
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence            567999999998898777766678988999999985

>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional

Probab=95.61  E-value=0.099  Score=51.61  Aligned_cols=77  Identities=14%  Similarity=0.277  Sum_probs=59.6

Q ss_pred             CCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcccC
Q 018529          170 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN  249 (354)
Q Consensus       170 ~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~  249 (354)
                      .++|+|.|.|.+|+..++.++..|. ++++++.++++.+.+++.|...++ -+..+.   +.+++..-..+|.++-+++.
T Consensus       400 ~~~vII~G~Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~g~~v~~-GDat~~---~~L~~agi~~A~~vvv~~~d  474 (621)
T PRK03562        400 QPRVIIAGFGRFGQIVGRLLLSSGV-KMTVLDHDPDHIETLRKFGMKVFY-GDATRM---DLLESAGAAKAEVLINAIDD  474 (621)
T ss_pred             cCcEEEEecChHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhcCCeEEE-EeCCCH---HHHHhcCCCcCCEEEEEeCC
Confidence            4689999999999999999999998 899999999999999998875433 333332   23444433378999999887


Q ss_pred             hH
Q 018529          250 ID  251 (354)
Q Consensus       250 ~~  251 (354)
                      ++
T Consensus       475 ~~  476 (621)
T PRK03562        475 PQ  476 (621)
T ss_pred             HH
Confidence            54

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=95.60  E-value=0.12  Score=42.88  Aligned_cols=34  Identities=18%  Similarity=0.362  Sum_probs=30.1

Q ss_pred             CCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCC
Q 018529          170 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS  203 (354)
Q Consensus       170 ~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~  203 (354)
                      ..+|+|+|+|++|...+..+-..|.+++..+|.+
T Consensus        21 ~s~VlIiG~gglG~evak~La~~GVg~i~lvD~d   54 (197)
T cd01492          21 SARILLIGLKGLGAEIAKNLVLSGIGSLTILDDR   54 (197)
T ss_pred             hCcEEEEcCCHHHHHHHHHHHHcCCCEEEEEECC
Confidence            4689999999999999999999999889888754

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=95.59  E-value=0.1  Score=42.49  Aligned_cols=33  Identities=24%  Similarity=0.240  Sum_probs=29.3

Q ss_pred             eEEEEcCChhHHHHHHHHHHcCCcEEEEEcCCh
Q 018529          172 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  204 (354)
Q Consensus       172 ~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~  204 (354)
                      +|+|+|+|++|...++.+-..|.++++.+|.+.
T Consensus         1 ~VlViG~GglGs~ia~~La~~Gvg~i~lvD~D~   33 (174)
T cd01487           1 KVGIAGAGGLGSNIAVLLARSGVGNLKLVDFDV   33 (174)
T ss_pred             CEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            489999999999999999999998899998765

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.57  E-value=0.085  Score=45.16  Aligned_cols=80  Identities=19%  Similarity=0.355  Sum_probs=50.0

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH----HhcCCce-EEcCCCCC-hhHHHHHHHHcC--CC
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-FVNTSEHD-RPIQEVIAEMTN--GG  239 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~----~~lg~~~-v~~~~~~~-~~~~~~i~~~~~--~~  239 (354)
                      .+.+++|+|+ |.+|...+..+...|+ .|+.++++.++.+.+    +..+... ++..+-.+ ..+.+.+++...  ++
T Consensus         6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   84 (239)
T PRK07666          6 QGKNALITGAGRGIGRAVAIALAKEGV-NVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGS   84 (239)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            3578999987 9999998888888999 899998887665433    2223221 22222222 123333333221  37


Q ss_pred             ccEEEEcccC
Q 018529          240 VDRSVECTGN  249 (354)
Q Consensus       240 ~dvv~d~~g~  249 (354)
                      +|++|.++|.
T Consensus        85 id~vi~~ag~   94 (239)
T PRK07666         85 IDILINNAGI   94 (239)
T ss_pred             ccEEEEcCcc
Confidence            8999998874

>PRK09242 tropinone reductase; Provisional

Probab=95.57  E-value=0.089  Score=45.61  Aligned_cols=79  Identities=19%  Similarity=0.263  Sum_probs=50.9

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh-c-----CCce-E--EcCCCCChhHHHHHHHHc--
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-F-----GVTD-F--VNTSEHDRPIQEVIAEMT--  236 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~-l-----g~~~-v--~~~~~~~~~~~~~i~~~~--  236 (354)
                      .++++||+|+ |.+|...+..+...|+ +|+.++++.++.+.+.+ +     +... .  .|..+.+ .+.+.+.+..  
T Consensus         8 ~~k~~lItGa~~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~   85 (257)
T PRK09242          8 DGQTALITGASKGIGLAIAREFLGLGA-DVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDE-DRRAILDWVEDH   85 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHH-HHHHHHHHHHHH
Confidence            4789999987 9999999999999999 89998888877654422 1     2221 1  2332221 2222222221  


Q ss_pred             CCCccEEEEcccC
Q 018529          237 NGGVDRSVECTGN  249 (354)
Q Consensus       237 ~~~~dvv~d~~g~  249 (354)
                      -+++|+++.+.|.
T Consensus        86 ~g~id~li~~ag~   98 (257)
T PRK09242         86 WDGLHILVNNAGG   98 (257)
T ss_pred             cCCCCEEEECCCC
Confidence            1479999999874

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=95.56  E-value=0.14  Score=46.84  Aligned_cols=35  Identities=31%  Similarity=0.356  Sum_probs=31.3

Q ss_pred             CCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCCh
Q 018529          170 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  204 (354)
Q Consensus       170 ~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~  204 (354)
                      ..+|+|+|+|++|..+++.+-..|.++++.+|.+.
T Consensus        28 ~~~VlivG~GGlGs~~a~~La~~Gvg~i~lvD~D~   62 (355)
T PRK05597         28 DAKVAVIGAGGLGSPALLYLAGAGVGHITIIDDDT   62 (355)
T ss_pred             CCeEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            47899999999999999999999999999998654

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=95.56  E-value=0.16  Score=38.70  Aligned_cols=92  Identities=24%  Similarity=0.352  Sum_probs=49.5

Q ss_pred             eEEEEcC-ChhHHHHHHHHHH-cCCcEEEEEcCChh-h--HHHHHhcCCc--eEEcCCCCChhHHHHHHHHcCCCccEEE
Q 018529          172 SVAVFGL-GAVGLAAAEGARI-AGASRIIGVDRSSK-R--FEEAKKFGVT--DFVNTSEHDRPIQEVIAEMTNGGVDRSV  244 (354)
Q Consensus       172 ~vlI~G~-g~~G~~a~~~a~~-~g~~~vi~v~~~~~-~--~~~~~~lg~~--~v~~~~~~~~~~~~~i~~~~~~~~dvv~  244 (354)
                      +|.|+|+ |-+|...++.+.. -+.+-+-++++++. .  .+.-.-.|..  .+..+.    ++    .+... .+|+++
T Consensus         2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~----~l----~~~~~-~~DVvI   72 (124)
T PF01113_consen    2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTD----DL----EELLE-EADVVI   72 (124)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-----H----HHHTT-H-SEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccch----hH----HHhcc-cCCEEE
Confidence            5889999 9999999999998 56644555555541 1  1111111111  111111    12    22222 289999


Q ss_pred             EcccChHhHHHHHHHhhCCCceEEEEcCCC
Q 018529          245 ECTGNIDNMISAFECVHDGWGVAVLVGVPS  274 (354)
Q Consensus       245 d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~  274 (354)
                      |++ .++.....++.+... |.-+.+|.+.
T Consensus        73 DfT-~p~~~~~~~~~~~~~-g~~~ViGTTG  100 (124)
T PF01113_consen   73 DFT-NPDAVYDNLEYALKH-GVPLVIGTTG  100 (124)
T ss_dssp             EES--HHHHHHHHHHHHHH-T-EEEEE-SS
T ss_pred             EcC-ChHHhHHHHHHHHhC-CCCEEEECCC
Confidence            998 556665555555554 6666677654

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>PRK10258 biotin biosynthesis protein BioC; Provisional

Probab=95.55  E-value=0.39  Score=41.58  Aligned_cols=98  Identities=14%  Similarity=0.228  Sum_probs=63.3

Q ss_pred             cCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCc-eEEcCCCCChhHHHHHHHHcCCCccEE
Q 018529          165 AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT-DFVNTSEHDRPIQEVIAEMTNGGVDRS  243 (354)
Q Consensus       165 ~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~-~v~~~~~~~~~~~~~i~~~~~~~~dvv  243 (354)
                      ....++++||-+|||. |..+..+++ .|. .|+++|.+++..+.+++.... ..+..+     +.+ + .+..+.||+|
T Consensus        38 l~~~~~~~vLDiGcG~-G~~~~~l~~-~~~-~v~~~D~s~~~l~~a~~~~~~~~~~~~d-----~~~-~-~~~~~~fD~V  107 (251)
T PRK10258         38 LPQRKFTHVLDAGCGP-GWMSRYWRE-RGS-QVTALDLSPPMLAQARQKDAADHYLAGD-----IES-L-PLATATFDLA  107 (251)
T ss_pred             cCccCCCeEEEeeCCC-CHHHHHHHH-cCC-eEEEEECCHHHHHHHHhhCCCCCEEEcC-----ccc-C-cCCCCcEEEE
Confidence            3345678899999875 666666655 476 999999999999888775421 122111     100 0 0122369999


Q ss_pred             EEccc------ChHhHHHHHHHhhCCCceEEEEcCC
Q 018529          244 VECTG------NIDNMISAFECVHDGWGVAVLVGVP  273 (354)
Q Consensus       244 ~d~~g------~~~~~~~~~~~l~~~~g~~v~~g~~  273 (354)
                      +....      ....+..+.+.|+++ |.+++....
T Consensus       108 ~s~~~l~~~~d~~~~l~~~~~~Lk~g-G~l~~~~~~  142 (251)
T PRK10258        108 WSNLAVQWCGNLSTALRELYRVVRPG-GVVAFTTLV  142 (251)
T ss_pred             EECchhhhcCCHHHHHHHHHHHcCCC-eEEEEEeCC
Confidence            87532      124578888999997 998876543

>PRK04266 fibrillarin; Provisional

Probab=95.54  E-value=0.24  Score=42.18  Aligned_cols=101  Identities=17%  Similarity=0.180  Sum_probs=61.9

Q ss_pred             hhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhc-----CCceEEcCCCCChhHHHHHHHHcC
Q 018529          163 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF-----GVTDFVNTSEHDRPIQEVIAEMTN  237 (354)
Q Consensus       163 ~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~l-----g~~~v~~~~~~~~~~~~~i~~~~~  237 (354)
                      +...+++|++||=+|+|. |..+..+++..+...|++++.+++..+.+.+.     ++ ..+.-+..+  . .....+. 
T Consensus        66 ~~l~i~~g~~VlD~G~G~-G~~~~~la~~v~~g~V~avD~~~~ml~~l~~~a~~~~nv-~~i~~D~~~--~-~~~~~l~-  139 (226)
T PRK04266         66 KNFPIKKGSKVLYLGAAS-GTTVSHVSDIVEEGVVYAVEFAPRPMRELLEVAEERKNI-IPILADARK--P-ERYAHVV-  139 (226)
T ss_pred             hhCCCCCCCEEEEEccCC-CHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhhcCCc-EEEECCCCC--c-chhhhcc-
Confidence            356889999999888764 55566677766533899999999776644322     12 122111111  0 0001111 


Q ss_pred             CCccEEEEcccChH----hHHHHHHHhhCCCceEEEE
Q 018529          238 GGVDRSVECTGNID----NMISAFECVHDGWGVAVLV  270 (354)
Q Consensus       238 ~~~dvv~d~~g~~~----~~~~~~~~l~~~~g~~v~~  270 (354)
                      ..+|+|+.....+.    .++.+.+.|+++ |++++.
T Consensus       140 ~~~D~i~~d~~~p~~~~~~L~~~~r~LKpG-G~lvI~  175 (226)
T PRK04266        140 EKVDVIYQDVAQPNQAEIAIDNAEFFLKDG-GYLLLA  175 (226)
T ss_pred             ccCCEEEECCCChhHHHHHHHHHHHhcCCC-cEEEEE
Confidence            25999996554322    367888899997 998874

>PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases

Probab=95.54  E-value=0.025  Score=47.21  Aligned_cols=105  Identities=24%  Similarity=0.294  Sum_probs=68.2

Q ss_pred             cCCCCCCeEEEEcCChhHHHHHHHHHHcCC-cEEEEEcCChhhHHHHHh----cCCceEEcCCCCChhHHHHHHHHcC--
Q 018529          165 AKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTN--  237 (354)
Q Consensus       165 ~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~-~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~~~~--  237 (354)
                      .+....++||-+|++ +|+.++.+|..+.- .+|+.++.++++.+.+++    .|...-+.....+  ..+.+.++.+  
T Consensus        41 ~~~~~~k~vLEIGt~-~GySal~la~~l~~~g~i~tiE~~~~~~~~A~~~~~~ag~~~~I~~~~gd--a~~~l~~l~~~~  117 (205)
T PF01596_consen   41 VRLTRPKRVLEIGTF-TGYSALWLAEALPEDGKITTIEIDPERAEIARENFRKAGLDDRIEVIEGD--ALEVLPELANDG  117 (205)
T ss_dssp             HHHHT-SEEEEESTT-TSHHHHHHHHTSTTTSEEEEEESSHHHHHHHHHHHHHTTGGGGEEEEES---HHHHHHHHHHTT
T ss_pred             HHhcCCceEEEeccc-cccHHHHHHHhhcccceEEEecCcHHHHHHHHHHHHhcCCCCcEEEEEec--cHhhHHHHHhcc
Confidence            334556789999975 48889999988742 299999999999888754    4653222222232  4455554432  


Q ss_pred             --CCccEEE-EcccC--hHhHHHHHHHhhCCCceEEEEcCC
Q 018529          238 --GGVDRSV-ECTGN--IDNMISAFECVHDGWGVAVLVGVP  273 (354)
Q Consensus       238 --~~~dvv~-d~~g~--~~~~~~~~~~l~~~~g~~v~~g~~  273 (354)
                        +.||.|| |+.-.  ...++.+++.|+++ |.++.=+..
T Consensus       118 ~~~~fD~VFiDa~K~~y~~y~~~~~~ll~~g-gvii~DN~l  157 (205)
T PF01596_consen  118 EEGQFDFVFIDADKRNYLEYFEKALPLLRPG-GVIIADNVL  157 (205)
T ss_dssp             TTTSEEEEEEESTGGGHHHHHHHHHHHEEEE-EEEEEETTT
T ss_pred             CCCceeEEEEcccccchhhHHHHHhhhccCC-eEEEEcccc
Confidence              3699997 55322  24677888999996 777655443

The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A ....

>PRK08328 hypothetical protein; Provisional

Probab=95.53  E-value=0.085  Score=45.08  Aligned_cols=34  Identities=35%  Similarity=0.488  Sum_probs=30.3

Q ss_pred             CCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCC
Q 018529          170 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS  203 (354)
Q Consensus       170 ~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~  203 (354)
                      +.+|+|+|+|++|...+..+-..|.++++.+|.+
T Consensus        27 ~~~VlIiG~GGlGs~ia~~La~~Gvg~i~lvD~D   60 (231)
T PRK08328         27 KAKVAVVGVGGLGSPVAYYLAAAGVGRILLIDEQ   60 (231)
T ss_pred             CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            4689999999999999999999999899888744

>PRK13243 glyoxylate reductase; Reviewed

Probab=95.51  E-value=0.12  Score=46.80  Aligned_cols=89  Identities=19%  Similarity=0.249  Sum_probs=60.7

Q ss_pred             CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEccc
Q 018529          169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  248 (354)
Q Consensus       169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g  248 (354)
                      .|.+|.|+|.|.+|...++.++.+|. +|++.+++.+.. ...+++...    .  +  +.+.++     ..|+|+.+++
T Consensus       149 ~gktvgIiG~G~IG~~vA~~l~~~G~-~V~~~d~~~~~~-~~~~~~~~~----~--~--l~ell~-----~aDiV~l~lP  213 (333)
T PRK13243        149 YGKTIGIIGFGRIGQAVARRAKGFGM-RILYYSRTRKPE-AEKELGAEY----R--P--LEELLR-----ESDFVSLHVP  213 (333)
T ss_pred             CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCChh-hHHHcCCEe----c--C--HHHHHh-----hCCEEEEeCC
Confidence            57899999999999999999999999 899998875443 233444321    1  1  333332     2688888876


Q ss_pred             ChH----hH-HHHHHHhhCCCceEEEEcCC
Q 018529          249 NID----NM-ISAFECVHDGWGVAVLVGVP  273 (354)
Q Consensus       249 ~~~----~~-~~~~~~l~~~~g~~v~~g~~  273 (354)
                      ..+    .+ ...+..++++ ..++.++..
T Consensus       214 ~t~~T~~~i~~~~~~~mk~g-a~lIN~aRg  242 (333)
T PRK13243        214 LTKETYHMINEERLKLMKPT-AILVNTARG  242 (333)
T ss_pred             CChHHhhccCHHHHhcCCCC-eEEEECcCc
Confidence            432    12 3566778886 777777654

>PRK07340 ornithine cyclodeaminase; Validated

Probab=95.51  E-value=0.07  Score=47.68  Aligned_cols=93  Identities=17%  Similarity=0.109  Sum_probs=63.8

Q ss_pred             CCCCeEEEEcCChhHHHHHHHHHH-cCCcEEEEEcCChhhHHHH-HhcC---CceEEcCCCCChhHHHHHHHHcCCCccE
Q 018529          168 ERGSSVAVFGLGAVGLAAAEGARI-AGASRIIGVDRSSKRFEEA-KKFG---VTDFVNTSEHDRPIQEVIAEMTNGGVDR  242 (354)
Q Consensus       168 ~~~~~vlI~G~g~~G~~a~~~a~~-~g~~~vi~v~~~~~~~~~~-~~lg---~~~v~~~~~~~~~~~~~i~~~~~~~~dv  242 (354)
                      ....+++|+|+|..|.+.+..+.. .+.++|.+.+++.++.+.+ .++.   ....  .  .+  ..+.+     ..+|+
T Consensus       123 ~~~~~v~IiGaG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~--~--~~--~~~av-----~~aDi  191 (304)
T PRK07340        123 APPGDLLLIGTGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAE--P--LD--GEAIP-----EAVDL  191 (304)
T ss_pred             CCCCEEEEECCcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeE--E--CC--HHHHh-----hcCCE
Confidence            456789999999999998888764 6777899999998876643 4443   2211  1  11  33333     25899


Q ss_pred             EEEcccChHhHHHHHHHhhCCCceEEEEcCCC
Q 018529          243 SVECTGNIDNMISAFECVHDGWGVAVLVGVPS  274 (354)
Q Consensus       243 v~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~  274 (354)
                      |+.|+++.+.+-..+  ++++ -.+..+|...
T Consensus       192 VitaT~s~~Pl~~~~--~~~g-~hi~~iGs~~  220 (304)
T PRK07340        192 VVTATTSRTPVYPEA--ARAG-RLVVAVGAFT  220 (304)
T ss_pred             EEEccCCCCceeCcc--CCCC-CEEEecCCCC
Confidence            999998765443333  6785 7888888654

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=95.50  E-value=0.11  Score=42.00  Aligned_cols=92  Identities=15%  Similarity=0.316  Sum_probs=59.7

Q ss_pred             eEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCC--ceEEcCCCCChhHHHHHHHHcCCCccEEEEccc
Q 018529          172 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV--TDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  248 (354)
Q Consensus       172 ~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~--~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g  248 (354)
                      +|.|+|+ |-+|...++-|+..|. .|+++.|+++|....+.+.+  ..+++       ..+....+  .|+|+||++.|
T Consensus         2 KIaiIgAsG~~Gs~i~~EA~~RGH-eVTAivRn~~K~~~~~~~~i~q~Difd-------~~~~a~~l--~g~DaVIsA~~   71 (211)
T COG2910           2 KIAIIGASGKAGSRILKEALKRGH-EVTAIVRNASKLAARQGVTILQKDIFD-------LTSLASDL--AGHDAVISAFG   71 (211)
T ss_pred             eEEEEecCchhHHHHHHHHHhCCC-eeEEEEeChHhccccccceeecccccC-------hhhhHhhh--cCCceEEEecc
Confidence            5788887 9999999999999998 99999999998866432221  01222       11111122  37999999887


Q ss_pred             Ch---------HhHHHHHHHhhCC-CceEEEEcCC
Q 018529          249 NI---------DNMISAFECVHDG-WGVAVLVGVP  273 (354)
Q Consensus       249 ~~---------~~~~~~~~~l~~~-~g~~v~~g~~  273 (354)
                      ..         ...+.++..|+.- -.|+..+|..
T Consensus        72 ~~~~~~~~~~~k~~~~li~~l~~agv~RllVVGGA  106 (211)
T COG2910          72 AGASDNDELHSKSIEALIEALKGAGVPRLLVVGGA  106 (211)
T ss_pred             CCCCChhHHHHHHHHHHHHHHhhcCCeeEEEEcCc
Confidence            53         1233456666652 1467777653

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=95.50  E-value=0.2  Score=43.19  Aligned_cols=74  Identities=26%  Similarity=0.350  Sum_probs=46.6

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCc-eE--EcCCCCChhHHHHHHHHcC--CCccE
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT-DF--VNTSEHDRPIQEVIAEMTN--GGVDR  242 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~-~v--~~~~~~~~~~~~~i~~~~~--~~~dv  242 (354)
                      +++++||+|+ |.+|...+..+...|+ +|++++++.     +...+.. ..  .|..+. ..+.+.+.+...  +.+|+
T Consensus         7 ~~k~vlItGas~~iG~~la~~l~~~G~-~v~~~~~~~-----~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~id~   79 (252)
T PRK08220          7 SGKTVWVTGAAQGIGYAVALAFVEAGA-KVIGFDQAF-----LTQEDYPFATFVLDVSDA-AAVAQVCQRLLAETGPLDV   79 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecch-----hhhcCCceEEEEecCCCH-HHHHHHHHHHHHHcCCCCE
Confidence            4678999987 9999999998888899 888887775     2222221 11  222221 123333333221  36899


Q ss_pred             EEEcccC
Q 018529          243 SVECTGN  249 (354)
Q Consensus       243 v~d~~g~  249 (354)
                      ++.+.|.
T Consensus        80 vi~~ag~   86 (252)
T PRK08220         80 LVNAAGI   86 (252)
T ss_pred             EEECCCc
Confidence            9999875

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.49  E-value=0.37  Score=41.47  Aligned_cols=102  Identities=17%  Similarity=0.159  Sum_probs=58.6

Q ss_pred             CCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcC-ChhhH----HHHHhcCCce-E--EcCCCCChhHHHHHHHHcC--C
Q 018529          170 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR-SSKRF----EEAKKFGVTD-F--VNTSEHDRPIQEVIAEMTN--G  238 (354)
Q Consensus       170 ~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~-~~~~~----~~~~~lg~~~-v--~~~~~~~~~~~~~i~~~~~--~  238 (354)
                      +.++||+|+ |.+|...+..+...|+ +|+.+.+ +.++.    ..+++.+... .  .|..+.+ .+...+++...  +
T Consensus         6 ~~~vlitGasg~iG~~l~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~   83 (252)
T PRK06077          6 DKVVVVTGSGRGIGRAIAVRLAKEGS-LVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTRE-GCETLAKATIDRYG   83 (252)
T ss_pred             CcEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHH-HHHHHHHHHHHHcC
Confidence            578999987 9999998888888999 6655543 32222    2233344321 2  2332221 22222222211  3


Q ss_pred             CccEEEEcccCh----------H---------------hHHHHHHHhhCCCceEEEEcCCC
Q 018529          239 GVDRSVECTGNI----------D---------------NMISAFECVHDGWGVAVLVGVPS  274 (354)
Q Consensus       239 ~~dvv~d~~g~~----------~---------------~~~~~~~~l~~~~g~~v~~g~~~  274 (354)
                      ++|++|.++|..          +               ..+.+.+.++.. |++++++...
T Consensus        84 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~sS~~  143 (252)
T PRK06077         84 VADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREG-GAIVNIASVA  143 (252)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcC-cEEEEEcchh
Confidence            789999998730          0               123345555675 8999888643

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=95.49  E-value=0.094  Score=45.09  Aligned_cols=80  Identities=23%  Similarity=0.237  Sum_probs=48.7

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHH----HHhcCCc-eEEcCCCCC-hhHHHHHHHHcC--CC
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEE----AKKFGVT-DFVNTSEHD-RPIQEVIAEMTN--GG  239 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~----~~~lg~~-~v~~~~~~~-~~~~~~i~~~~~--~~  239 (354)
                      .+.++||+|+ |.+|...+..+...|+ +|++++++.++...    +++.+.. .++..+-.+ ..+.+.+.+...  +.
T Consensus         5 ~~~~ilItGasg~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   83 (251)
T PRK12826          5 EGRVALVTGAARGIGRAIAVRLAADGA-EVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGR   83 (251)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            4578999987 9999998888888898 89999888654432    2333322 122111111 122232322211  36


Q ss_pred             ccEEEEcccC
Q 018529          240 VDRSVECTGN  249 (354)
Q Consensus       240 ~dvv~d~~g~  249 (354)
                      +|+|+.++|.
T Consensus        84 ~d~vi~~ag~   93 (251)
T PRK12826         84 LDILVANAGI   93 (251)
T ss_pred             CCEEEECCCC
Confidence            8999998764

>PRK08223 hypothetical protein; Validated

Probab=95.48  E-value=0.15  Score=44.66  Aligned_cols=35  Identities=31%  Similarity=0.304  Sum_probs=30.9

Q ss_pred             CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCC
Q 018529          169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS  203 (354)
Q Consensus       169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~  203 (354)
                      ...+|+|+|+|++|..+++.+-..|.+++..+|.+
T Consensus        26 ~~s~VlIvG~GGLGs~va~~LA~aGVG~i~lvD~D   60 (287)
T PRK08223         26 RNSRVAIAGLGGVGGIHLLTLARLGIGKFTIADFD   60 (287)
T ss_pred             hcCCEEEECCCHHHHHHHHHHHHhCCCeEEEEeCC
Confidence            35789999999999999999999999999888754

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=95.48  E-value=0.13  Score=44.59  Aligned_cols=78  Identities=18%  Similarity=0.210  Sum_probs=48.5

Q ss_pred             CCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH-h----cCCc--eEE--cCCCCChhHHHHHHHHc--C
Q 018529          170 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-K----FGVT--DFV--NTSEHDRPIQEVIAEMT--N  237 (354)
Q Consensus       170 ~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~-~----lg~~--~v~--~~~~~~~~~~~~i~~~~--~  237 (354)
                      ++++||+|+ |.+|...+..+...|+ +|+.++++.++.+.+. +    .+..  ..+  |..+. .++.+.+.+..  .
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~i~~~~~~~~~~~   79 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGY-RVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSE-QSVLALSRGVDEIF   79 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCH-HHHHHHHHHHHHHc
Confidence            468999987 9999998888888899 8888988876554332 1    2211  122  22221 12222232221  1


Q ss_pred             CCccEEEEcccC
Q 018529          238 GGVDRSVECTGN  249 (354)
Q Consensus       238 ~~~dvv~d~~g~  249 (354)
                      +++|++++++|.
T Consensus        80 ~~id~vv~~ag~   91 (259)
T PRK12384         80 GRVDLLVYNAGI   91 (259)
T ss_pred             CCCCEEEECCCc
Confidence            478999998873

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=95.47  E-value=0.096  Score=45.46  Aligned_cols=79  Identities=27%  Similarity=0.290  Sum_probs=48.1

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHH---HHHhcCCc-eE--EcCCCCChhHHHHHHHHc--CCC
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFE---EAKKFGVT-DF--VNTSEHDRPIQEVIAEMT--NGG  239 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~---~~~~lg~~-~v--~~~~~~~~~~~~~i~~~~--~~~  239 (354)
                      .+.++||+|+ |.+|...++.+...|+ +|+++.++++..+   .+.+.+.. ..  .|..+.+ .+.+.+.+..  .++
T Consensus        14 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~i~~~~~~~~~~~g~   91 (258)
T PRK06935         14 DGKVAIVTGGNTGLGQGYAVALAKAGA-DIIITTHGTNWDETRRLIEKEGRKVTFVQVDLTKPE-SAEKVVKEALEEFGK   91 (258)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHHHhcCCceEEEEcCCCCHH-HHHHHHHHHHHHcCC
Confidence            4789999987 9999999999888999 8888877632222   22233432 12  2332221 2222233221  136


Q ss_pred             ccEEEEcccC
Q 018529          240 VDRSVECTGN  249 (354)
Q Consensus       240 ~dvv~d~~g~  249 (354)
                      +|+++.+.|.
T Consensus        92 id~li~~ag~  101 (258)
T PRK06935         92 IDILVNNAGT  101 (258)
T ss_pred             CCEEEECCCC
Confidence            8999998874

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=95.47  E-value=0.092  Score=45.32  Aligned_cols=77  Identities=29%  Similarity=0.373  Sum_probs=49.2

Q ss_pred             CeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCce-EE--cCCCCChhHHHHHHHHc--CCCc
Q 018529          171 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD-FV--NTSEHDRPIQEVIAEMT--NGGV  240 (354)
Q Consensus       171 ~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~~-v~--~~~~~~~~~~~~i~~~~--~~~~  240 (354)
                      .++||+|+ |.+|...+..+...|+ +|++++++.++.+.+.+    .+... .+  |..+. ..+.+.+++..  .++.
T Consensus         2 ~~vlItGa~g~lG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~~   79 (255)
T TIGR01963         2 KTALVTGAASGIGLAIALALAAAGA-NVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKE-DEIADMIAAAAAEFGGL   79 (255)
T ss_pred             CEEEEcCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCH-HHHHHHHHHHHHhcCCC
Confidence            57999987 9999999988888899 89999998877655433    23221 12  22221 12333222221  1368


Q ss_pred             cEEEEcccC
Q 018529          241 DRSVECTGN  249 (354)
Q Consensus       241 dvv~d~~g~  249 (354)
                      |+||.+.+.
T Consensus        80 d~vi~~a~~   88 (255)
T TIGR01963        80 DILVNNAGI   88 (255)
T ss_pred             CEEEECCCC
Confidence            999988764

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA []

Probab=95.46  E-value=0.037  Score=47.49  Aligned_cols=108  Identities=22%  Similarity=0.223  Sum_probs=65.8

Q ss_pred             hhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCC-cEEEEEcCChhhHHHHHh----cCCceEEcCCCCChhHH-HHHHH
Q 018529          161 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQ-EVIAE  234 (354)
Q Consensus       161 l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~-~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~-~~i~~  234 (354)
                      +....+++||++|+=-|.|+ |.++..+++..|. .+|+..+..+++.+.+++    +|....+.....|  +. +...+
T Consensus        32 I~~~l~i~pG~~VlEaGtGS-G~lt~~l~r~v~p~G~v~t~E~~~~~~~~A~~n~~~~gl~~~v~~~~~D--v~~~g~~~  108 (247)
T PF08704_consen   32 ILMRLDIRPGSRVLEAGTGS-GSLTHALARAVGPTGHVYTYEFREDRAEKARKNFERHGLDDNVTVHHRD--VCEEGFDE  108 (247)
T ss_dssp             HHHHTT--TT-EEEEE--TT-SHHHHHHHHHHTTTSEEEEEESSHHHHHHHHHHHHHTTCCTTEEEEES---GGCG--ST
T ss_pred             HHHHcCCCCCCEEEEecCCc-HHHHHHHHHHhCCCeEEEccccCHHHHHHHHHHHHHcCCCCCceeEecc--eecccccc
Confidence            45678999999999887653 6777788887763 399999999999888754    5653211111111  11 11111


Q ss_pred             HcCCCccEEEEcccCh-HhHHHHHHHh-hCCCceEEEEcC
Q 018529          235 MTNGGVDRSVECTGNI-DNMISAFECV-HDGWGVAVLVGV  272 (354)
Q Consensus       235 ~~~~~~dvv~d~~g~~-~~~~~~~~~l-~~~~g~~v~~g~  272 (354)
                      -.+..+|.||-=.+.| ..+..+.+.| +++ |+++.+.-
T Consensus       109 ~~~~~~DavfLDlp~Pw~~i~~~~~~L~~~g-G~i~~fsP  147 (247)
T PF08704_consen  109 ELESDFDAVFLDLPDPWEAIPHAKRALKKPG-GRICCFSP  147 (247)
T ss_dssp             T-TTSEEEEEEESSSGGGGHHHHHHHE-EEE-EEEEEEES
T ss_pred             cccCcccEEEEeCCCHHHHHHHHHHHHhcCC-ceEEEECC
Confidence            1123689887544444 5789999999 786 99988853

; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A.

>PRK08300 acetaldehyde dehydrogenase; Validated

Probab=95.44  E-value=0.2  Score=44.27  Aligned_cols=95  Identities=18%  Similarity=0.186  Sum_probs=56.4

Q ss_pred             CeEEEEcCChhHHHHH-HHHHHcCCcEEEEEcCChh--hHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcc
Q 018529          171 SSVAVFGLGAVGLAAA-EGARIAGASRIIGVDRSSK--RFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  247 (354)
Q Consensus       171 ~~vlI~G~g~~G~~a~-~~a~~~g~~~vi~v~~~~~--~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~  247 (354)
                      -++.|+|+|.+|...+ .+.+.-+.+-+.+++.+++  .+++++++|.....  .+    +.+.+....-..+|+||+++
T Consensus         5 lrVAIIGtG~IGt~hm~~l~~~~~velvAVvdid~es~gla~A~~~Gi~~~~--~~----ie~LL~~~~~~dIDiVf~AT   78 (302)
T PRK08300          5 LKVAIIGSGNIGTDLMIKILRSEHLEPGAMVGIDPESDGLARARRLGVATSA--EG----IDGLLAMPEFDDIDIVFDAT   78 (302)
T ss_pred             CeEEEEcCcHHHHHHHHHHhcCCCcEEEEEEeCChhhHHHHHHHHcCCCccc--CC----HHHHHhCcCCCCCCEEEECC
Confidence            4689999999998744 4444445533444445554  44677888864322  11    33333221013699999999


Q ss_pred             cChHhHHHHHHHhhCCCceEEEEcCC
Q 018529          248 GNIDNMISAFECVHDGWGVAVLVGVP  273 (354)
Q Consensus       248 g~~~~~~~~~~~l~~~~g~~v~~g~~  273 (354)
                      +...+.+.+.+++..  |..++...+
T Consensus        79 ~a~~H~e~a~~a~ea--Gk~VID~sP  102 (302)
T PRK08300         79 SAGAHVRHAAKLREA--GIRAIDLTP  102 (302)
T ss_pred             CHHHHHHHHHHHHHc--CCeEEECCc
Confidence            986666666666555  566655544

>TIGR02752 MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone methyltransferase

Probab=95.41  E-value=0.19  Score=42.93  Aligned_cols=105  Identities=16%  Similarity=0.229  Sum_probs=66.4

Q ss_pred             hhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCC-cEEEEEcCChhhHHHHHh----cCCceEEcCCCCChhHHHHHHHHc
Q 018529          162 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMT  236 (354)
Q Consensus       162 ~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~-~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~~~  236 (354)
                      .....++++++||=+|+|. |..+..+++..+. ..|++++.+++..+.+++    .+.+.+-.... +  ..+ + .+.
T Consensus        38 l~~l~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~v~~~~~-d--~~~-~-~~~  111 (231)
T TIGR02752        38 MKRMNVQAGTSALDVCCGT-ADWSIALAEAVGPEGHVIGLDFSENMLSVGRQKVKDAGLHNVELVHG-N--AME-L-PFD  111 (231)
T ss_pred             HHhcCCCCCCEEEEeCCCc-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEe-c--hhc-C-CCC
Confidence            3456778899999999864 6677788887642 289999999988777654    23322211111 1  100 0 112


Q ss_pred             CCCccEEEEccc------ChHhHHHHHHHhhCCCceEEEEcCC
Q 018529          237 NGGVDRSVECTG------NIDNMISAFECVHDGWGVAVLVGVP  273 (354)
Q Consensus       237 ~~~~dvv~d~~g------~~~~~~~~~~~l~~~~g~~v~~g~~  273 (354)
                      .+.+|+|+-...      ....++.+.+.|+++ |++++....
T Consensus       112 ~~~fD~V~~~~~l~~~~~~~~~l~~~~~~Lk~g-G~l~~~~~~  153 (231)
T TIGR02752       112 DNSFDYVTIGFGLRNVPDYMQVLREMYRVVKPG-GKVVCLETS  153 (231)
T ss_pred             CCCccEEEEecccccCCCHHHHHHHHHHHcCcC-eEEEEEECC
Confidence            237999975422      124577888999997 999876543

MenG is a generic term for a methyltransferase that catalyzes the last step in menaquinone biosynthesis; the exact enzymatic activity differs for different MenG because the menaquinone differ in their prenoid side chains in different species. Members of this MenG protein family are 2-heptaprenyl-1,4-naphthoquinone methyltransferase, and are found together in operons with the two subunits of the heptaprenyl diphosphate synthase in Bacillus subtilis and related species.

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.40  E-value=0.15  Score=44.97  Aligned_cols=94  Identities=19%  Similarity=0.244  Sum_probs=65.2

Q ss_pred             hcccchhhhhhhhhhhcCC-CCCCeEEEEc-CChhHHHHHHHHHHcCCcEEEEEc-CChhhHHHHHhcCCceEEcCCCCC
Q 018529          149 ILSCGVSTGLGATLNVAKP-ERGSSVAVFG-LGAVGLAAAEGARIAGASRIIGVD-RSSKRFEEAKKFGVTDFVNTSEHD  225 (354)
Q Consensus       149 ~l~~~~~~a~~~l~~~~~~-~~~~~vlI~G-~g~~G~~a~~~a~~~g~~~vi~v~-~~~~~~~~~~~lg~~~v~~~~~~~  225 (354)
                      .+||+....+.. ++..++ -.|++|+|+| ++.+|.-.+.++...|+ .|++.. ++.+                    
T Consensus       137 ~~PcTp~ai~~l-l~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~-tVtv~~~rT~~--------------------  194 (296)
T PRK14188        137 LVPCTPLGCMML-LRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANA-TVTIAHSRTRD--------------------  194 (296)
T ss_pred             CcCCCHHHHHHH-HHHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCC-EEEEECCCCCC--------------------
Confidence            456554444433 344443 5799999999 59999999999999999 888773 3321                    


Q ss_pred             hhHHHHHHHHcCCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCC
Q 018529          226 RPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS  274 (354)
Q Consensus       226 ~~~~~~i~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~  274 (354)
                        +.+.++     ..|+|+-++|.+..++..+  ++++ ..++.+|...
T Consensus       195 --l~e~~~-----~ADIVIsavg~~~~v~~~~--lk~G-avVIDvGin~  233 (296)
T PRK14188        195 --LPAVCR-----RADILVAAVGRPEMVKGDW--IKPG-ATVIDVGINR  233 (296)
T ss_pred             --HHHHHh-----cCCEEEEecCChhhcchhe--ecCC-CEEEEcCCcc
Confidence              222221     3799999999987776655  8886 8888888653

>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional

Probab=95.40  E-value=0.25  Score=45.19  Aligned_cols=97  Identities=16%  Similarity=0.312  Sum_probs=63.5

Q ss_pred             CeEEEEcC-ChhHHHHHHHHHHc--CCcEEEEEc--CChhh-HHHHHhcCCceEEcCCCCC-hhHHH-------------
Q 018529          171 SSVAVFGL-GAVGLAAAEGARIA--GASRIIGVD--RSSKR-FEEAKKFGVTDFVNTSEHD-RPIQE-------------  230 (354)
Q Consensus       171 ~~vlI~G~-g~~G~~a~~~a~~~--g~~~vi~v~--~~~~~-~~~~~~lg~~~v~~~~~~~-~~~~~-------------  230 (354)
                      ++|.|+|+ |++|..++...+..  .. +|+++.  ++.++ .+++++++...+...++.. ..+.+             
T Consensus         2 k~VaILGsTGSIG~~tL~vi~~~p~~f-~VvaLaa~~n~~~l~~q~~~f~p~~v~i~~~~~~~~l~~~l~~~~~~v~~G~   80 (385)
T PRK05447          2 KRITILGSTGSIGTQTLDVIRRNPDRF-RVVALSAGKNVELLAEQAREFRPKYVVVADEEAAKELKEALAAAGIEVLAGE   80 (385)
T ss_pred             ceEEEEcCChHHHHHHHHHHHhCcccc-EEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHhhccCCceEEECh
Confidence            57899996 99999999988765  45 677774  34433 3456778887766544321 11111             


Q ss_pred             -HHHHHcCC-CccEEEEcccChHhHHHHHHHhhCCCceEEE
Q 018529          231 -VIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVL  269 (354)
Q Consensus       231 -~i~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~  269 (354)
                       .+.++... .+|+|+.++++...+.-.+.+++.+ -++.+
T Consensus        81 ~~~~~l~~~~~vD~Vv~Ai~G~aGl~ptl~Ai~aG-K~VaL  120 (385)
T PRK05447         81 EGLCELAALPEADVVVAAIVGAAGLLPTLAAIRAG-KRIAL  120 (385)
T ss_pred             hHHHHHhcCCCCCEEEEeCcCcccHHHHHHHHHCC-CcEEE
Confidence             22222233 6899999998877888889999874 44443

>PRK12746 short chain dehydrogenase; Provisional

Probab=95.39  E-value=0.32  Score=41.98  Aligned_cols=79  Identities=18%  Similarity=0.265  Sum_probs=47.1

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEE-EcCChhhHHHH-Hhc---CCce-E--EcCCCCChhHHHHHHHHc---
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIG-VDRSSKRFEEA-KKF---GVTD-F--VNTSEHDRPIQEVIAEMT---  236 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~-v~~~~~~~~~~-~~l---g~~~-v--~~~~~~~~~~~~~i~~~~---  236 (354)
                      .+.+++|+|+ |.+|...++.+...|+ +|+. ..++.++.+.+ .++   +... +  .|..+. ..+.+.+++..   
T Consensus         5 ~~~~ilItGasg~iG~~la~~l~~~G~-~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~-~~i~~~~~~~~~~~   82 (254)
T PRK12746          5 DGKVALVTGASRGIGRAIAMRLANDGA-LVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSI-DGVKKLVEQLKNEL   82 (254)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCH-HHHHHHHHHHHHHh
Confidence            3578999987 9999999988888898 6655 45666554322 222   2221 2  233322 12333333321   


Q ss_pred             ----C-CCccEEEEcccC
Q 018529          237 ----N-GGVDRSVECTGN  249 (354)
Q Consensus       237 ----~-~~~dvv~d~~g~  249 (354)
                          . +++|++|.++|.
T Consensus        83 ~~~~~~~~id~vi~~ag~  100 (254)
T PRK12746         83 QIRVGTSEIDILVNNAGI  100 (254)
T ss_pred             ccccCCCCccEEEECCCC
Confidence                1 268999998874

>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]

Probab=95.39  E-value=0.29  Score=41.32  Aligned_cols=102  Identities=19%  Similarity=0.286  Sum_probs=60.6

Q ss_pred             CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCCh------hh-------------HHHHH----hcCCc-eEEcCCCC
Q 018529          169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS------KR-------------FEEAK----KFGVT-DFVNTSEH  224 (354)
Q Consensus       169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~------~~-------------~~~~~----~lg~~-~v~~~~~~  224 (354)
                      +..+|+|+|.|++|.+++..+-..|..++..+|-+.      +|             .+.++    +.+.. +|....+.
T Consensus        29 ~~~~V~VvGiGGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~~f  108 (263)
T COG1179          29 KQAHVCVVGIGGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAINDF  108 (263)
T ss_pred             hhCcEEEEecCchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehHhh
Confidence            357899999999999999999999998888886433      11             11111    11221 11111111


Q ss_pred             ChhHHHHHHHHcCCCccEEEEcccChHhHHHH-HHHhhCCCceEEEEcCC
Q 018529          225 DRPIQEVIAEMTNGGVDRSVECTGNIDNMISA-FECVHDGWGVAVLVGVP  273 (354)
Q Consensus       225 ~~~~~~~i~~~~~~~~dvv~d~~g~~~~~~~~-~~~l~~~~g~~v~~g~~  273 (354)
                        --.+.+.++..+++|.|+||.-+-..--.+ ..|...+ -.++..+..
T Consensus       109 --~t~en~~~~~~~~~DyvIDaiD~v~~Kv~Li~~c~~~k-i~vIss~Ga  155 (263)
T COG1179         109 --ITEENLEDLLSKGFDYVIDAIDSVRAKVALIAYCRRNK-IPVISSMGA  155 (263)
T ss_pred             --hCHhHHHHHhcCCCCEEEEchhhhHHHHHHHHHHHHcC-CCEEeeccc
Confidence              022345556666899999998654433333 3355554 556655443

>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional

Probab=95.39  E-value=0.14  Score=50.37  Aligned_cols=78  Identities=14%  Similarity=0.207  Sum_probs=60.1

Q ss_pred             CCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcccC
Q 018529          170 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN  249 (354)
Q Consensus       170 ~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~  249 (354)
                      .++|+|.|.|.+|...++.++..|. .++++|.++++.+.+++.|...++ -+..+   .+.+++..-+.+|.++-+++.
T Consensus       400 ~~~vII~G~Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~g~~v~~-GDat~---~~~L~~agi~~A~~vv~~~~d  474 (601)
T PRK03659        400 KPQVIIVGFGRFGQVIGRLLMANKM-RITVLERDISAVNLMRKYGYKVYY-GDATQ---LELLRAAGAEKAEAIVITCNE  474 (601)
T ss_pred             cCCEEEecCchHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhCCCeEEE-eeCCC---HHHHHhcCCccCCEEEEEeCC
Confidence            3689999999999999999999998 899999999999999998875443 23222   233444433378999999988


Q ss_pred             hHh
Q 018529          250 IDN  252 (354)
Q Consensus       250 ~~~  252 (354)
                      ++.
T Consensus       475 ~~~  477 (601)
T PRK03659        475 PED  477 (601)
T ss_pred             HHH
Confidence            543

>TIGR00452 methyltransferase, putative

Probab=95.38  E-value=0.17  Score=45.28  Aligned_cols=101  Identities=16%  Similarity=0.173  Sum_probs=62.9

Q ss_pred             hhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHH---HHhc-CC---ceEEcCCCCChhHHH
Q 018529          158 LGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEE---AKKF-GV---TDFVNTSEHDRPIQE  230 (354)
Q Consensus       158 ~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~---~~~l-g~---~~v~~~~~~~~~~~~  230 (354)
                      |..+.......+|++||=+|||. |..+..++.. |+..|++++.++.-...   ++++ +.   ..+...   +     
T Consensus       110 ~~~~l~~l~~~~g~~VLDvGCG~-G~~~~~~~~~-g~~~v~GiDpS~~ml~q~~~~~~~~~~~~~v~~~~~---~-----  179 (314)
T TIGR00452       110 WDRVLPHLSPLKGRTILDVGCGS-GYHMWRMLGH-GAKSLVGIDPTVLFLCQFEAVRKLLDNDKRAILEPL---G-----  179 (314)
T ss_pred             HHHHHHhcCCCCCCEEEEeccCC-cHHHHHHHHc-CCCEEEEEcCCHHHHHHHHHHHHHhccCCCeEEEEC---C-----
Confidence            33444555677889999999976 7777666654 66689999988854332   2222 21   112111   1     


Q ss_pred             HHHHHcC-CCccEEEEcc-----cCh-HhHHHHHHHhhCCCceEEEE
Q 018529          231 VIAEMTN-GGVDRSVECT-----GNI-DNMISAFECVHDGWGVAVLV  270 (354)
Q Consensus       231 ~i~~~~~-~~~dvv~d~~-----g~~-~~~~~~~~~l~~~~g~~v~~  270 (354)
                       +.++.. ..||+|+...     ..+ ..+..+.+.|+++ |++++-
T Consensus       180 -ie~lp~~~~FD~V~s~gvL~H~~dp~~~L~el~r~LkpG-G~Lvle  224 (314)
T TIGR00452       180 -IEQLHELYAFDTVFSMGVLYHRKSPLEHLKQLKHQLVIK-GELVLE  224 (314)
T ss_pred             -HHHCCCCCCcCEEEEcchhhccCCHHHHHHHHHHhcCCC-CEEEEE
Confidence             122222 2799998642     122 5788899999997 998864

Known examples to date are restricted to the proteobacteria.

>PLN02928 oxidoreductase family protein

Probab=95.37  E-value=0.13  Score=46.76  Aligned_cols=97  Identities=23%  Similarity=0.283  Sum_probs=60.5

Q ss_pred             CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcC----C-ceEEcCCCCChhHHHHHHHHcCCCccEE
Q 018529          169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG----V-TDFVNTSEHDRPIQEVIAEMTNGGVDRS  243 (354)
Q Consensus       169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg----~-~~v~~~~~~~~~~~~~i~~~~~~~~dvv  243 (354)
                      .|.++.|+|.|.+|...++.++.+|. +|++.+++..+... ..++    . ...........++.+.+++     .|+|
T Consensus       158 ~gktvGIiG~G~IG~~vA~~l~afG~-~V~~~dr~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~L~ell~~-----aDiV  230 (347)
T PLN02928        158 FGKTVFILGYGAIGIELAKRLRPFGV-KLLATRRSWTSEPE-DGLLIPNGDVDDLVDEKGGHEDIYEFAGE-----ADIV  230 (347)
T ss_pred             CCCEEEEECCCHHHHHHHHHHhhCCC-EEEEECCCCChhhh-hhhccccccccccccccCcccCHHHHHhh-----CCEE
Confidence            57899999999999999999999999 99999876432211 1111    0 0000000000114443333     6999


Q ss_pred             EEcccChH----h-HHHHHHHhhCCCceEEEEcCC
Q 018529          244 VECTGNID----N-MISAFECVHDGWGVAVLVGVP  273 (354)
Q Consensus       244 ~d~~g~~~----~-~~~~~~~l~~~~g~~v~~g~~  273 (354)
                      +.+++...    . -...+..|+++ ..+|.++..
T Consensus       231 vl~lPlt~~T~~li~~~~l~~Mk~g-a~lINvaRG  264 (347)
T PLN02928        231 VLCCTLTKETAGIVNDEFLSSMKKG-ALLVNIARG  264 (347)
T ss_pred             EECCCCChHhhcccCHHHHhcCCCC-eEEEECCCc
Confidence            98876322    1 23577788886 888877754

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.35  E-value=0.17  Score=48.41  Aligned_cols=71  Identities=28%  Similarity=0.295  Sum_probs=49.4

Q ss_pred             CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChh-----hHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccE
Q 018529          168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK-----RFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDR  242 (354)
Q Consensus       168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~-----~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dv  242 (354)
                      ..+++|+|+|+|.+|+.++.+++..|. .|++++.+++     ..+.+++.|+.........          . ..++|+
T Consensus        14 ~~~~~v~viG~G~~G~~~A~~L~~~G~-~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~~----------~-~~~~D~   81 (480)
T PRK01438         14 WQGLRVVVAGLGVSGFAAADALLELGA-RVTVVDDGDDERHRALAAILEALGATVRLGPGPT----------L-PEDTDL   81 (480)
T ss_pred             cCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhhHHHHHHHHHcCCEEEECCCcc----------c-cCCCCE
Confidence            356789999999999999999999999 8888875542     2344666787544322111          0 125788


Q ss_pred             EEEcccCh
Q 018529          243 SVECTGNI  250 (354)
Q Consensus       243 v~d~~g~~  250 (354)
                      |+.+.|.+
T Consensus        82 Vv~s~Gi~   89 (480)
T PRK01438         82 VVTSPGWR   89 (480)
T ss_pred             EEECCCcC
Confidence            88887753

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.35  E-value=0.17  Score=44.56  Aligned_cols=77  Identities=21%  Similarity=0.230  Sum_probs=54.7

Q ss_pred             CCCCCeEEEEcCCh-hHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEE
Q 018529          167 PERGSSVAVFGLGA-VGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVE  245 (354)
Q Consensus       167 ~~~~~~vlI~G~g~-~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d  245 (354)
                      .-.|++++|+|.|. +|...+.++...|+ .|+.+.+..+.                     +.+.+     ..+|+|+.
T Consensus       156 ~l~Gk~vvViG~gg~vGkpia~~L~~~ga-tVtv~~~~t~~---------------------L~~~~-----~~aDIvI~  208 (283)
T PRK14192        156 ELAGKHAVVVGRSAILGKPMAMMLLNANA-TVTICHSRTQN---------------------LPELV-----KQADIIVG  208 (283)
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHHHhCCC-EEEEEeCCchh---------------------HHHHh-----ccCCEEEE
Confidence            35788999999976 99999999999999 88887542111                     22212     25899999


Q ss_pred             cccChHhHHHHHHHhhCCCceEEEEcCC
Q 018529          246 CTGNIDNMISAFECVHDGWGVAVLVGVP  273 (354)
Q Consensus       246 ~~g~~~~~~~~~~~l~~~~g~~v~~g~~  273 (354)
                      ++|.+..+.  .+.++++ ..++.++..
T Consensus       209 AtG~~~~v~--~~~lk~g-avViDvg~n  233 (283)
T PRK14192        209 AVGKPELIK--KDWIKQG-AVVVDAGFH  233 (283)
T ss_pred             ccCCCCcCC--HHHcCCC-CEEEEEEEe
Confidence            998766433  3457885 777777654

>PRK06101 short chain dehydrogenase; Provisional

Probab=95.34  E-value=0.18  Score=43.19  Aligned_cols=75  Identities=13%  Similarity=0.162  Sum_probs=47.9

Q ss_pred             CeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCC--c-eEEcCCCCChhHHHHHHHHcCCCccEEEEc
Q 018529          171 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV--T-DFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  246 (354)
Q Consensus       171 ~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~--~-~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~  246 (354)
                      .+++|+|+ |++|...+..+...|+ +|+++++++++.+.+.+.+.  . ...|..+. .++.+.+++.. ...|.++.+
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~-~~~d~~i~~   78 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGW-QVIACGRNQSVLDELHTQSANIFTLAFDVTDH-PGTKAALSQLP-FIPELWIFN   78 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHhcCCCeEEEeeCCCH-HHHHHHHHhcc-cCCCEEEEc
Confidence            46899987 9999988877778899 89999999888776654332  1 12233332 23444444432 245776666


Q ss_pred             cc
Q 018529          247 TG  248 (354)
Q Consensus       247 ~g  248 (354)
                      +|
T Consensus        79 ag   80 (240)
T PRK06101         79 AG   80 (240)
T ss_pred             Cc
Confidence            54

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.32  E-value=0.18  Score=44.33  Aligned_cols=81  Identities=21%  Similarity=0.316  Sum_probs=48.8

Q ss_pred             CCCCCeEEEEcC---ChhHHHHHHHHHHcCCcEEEEEcCCh---hhHHHH-HhcCCceE--EcCCCCChhHHHHHHHHcC
Q 018529          167 PERGSSVAVFGL---GAVGLAAAEGARIAGASRIIGVDRSS---KRFEEA-KKFGVTDF--VNTSEHDRPIQEVIAEMTN  237 (354)
Q Consensus       167 ~~~~~~vlI~G~---g~~G~~a~~~a~~~g~~~vi~v~~~~---~~~~~~-~~lg~~~v--~~~~~~~~~~~~~i~~~~~  237 (354)
                      +-.++++||+|+   +++|.+.+..+...|+ +|+.+.+++   ++.+.+ ++++....  .|..+. .+..+.+.++..
T Consensus         7 ~~~~k~~lItGas~~~GIG~aia~~la~~G~-~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~   84 (272)
T PRK08159          7 LMAGKRGLILGVANNRSIAWGIAKACRAAGA-ELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDE-ASIDAVFETLEK   84 (272)
T ss_pred             cccCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCH-HHHHHHHHHHHH
Confidence            345789999986   5899998888888999 787776654   233322 33453222  233222 123333333222


Q ss_pred             --CCccEEEEcccC
Q 018529          238 --GGVDRSVECTGN  249 (354)
Q Consensus       238 --~~~dvv~d~~g~  249 (354)
                        +.+|++++++|.
T Consensus        85 ~~g~iD~lv~nAG~   98 (272)
T PRK08159         85 KWGKLDFVVHAIGF   98 (272)
T ss_pred             hcCCCcEEEECCcc
Confidence              478999998863

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=95.32  E-value=0.12  Score=44.75  Aligned_cols=79  Identities=18%  Similarity=0.235  Sum_probs=50.4

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH----HhcCCce-E--EcCCCCChhHHHHHHHHc--CC
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-F--VNTSEHDRPIQEVIAEMT--NG  238 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~----~~lg~~~-v--~~~~~~~~~~~~~i~~~~--~~  238 (354)
                      .+.++||+|+ |.+|...+..+...|+ +++.++++.++.+.+    ++.+... .  .|..+.+ .+.+.++...  .+
T Consensus        10 ~~k~vlVtG~s~gIG~~la~~l~~~G~-~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~-~i~~~~~~~~~~~~   87 (255)
T PRK06113         10 DGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQ-ELSALADFALSKLG   87 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHH-HHHHHHHHHHHHcC
Confidence            4789999987 9999999988888999 788888877765443    2233321 2  2333221 2223333221  13


Q ss_pred             CccEEEEcccC
Q 018529          239 GVDRSVECTGN  249 (354)
Q Consensus       239 ~~dvv~d~~g~  249 (354)
                      ++|+++.++|.
T Consensus        88 ~~d~li~~ag~   98 (255)
T PRK06113         88 KVDILVNNAGG   98 (255)
T ss_pred             CCCEEEECCCC
Confidence            68999998873

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=95.27  E-value=0.14  Score=44.67  Aligned_cols=79  Identities=22%  Similarity=0.379  Sum_probs=49.8

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH----HhcCCce-E--EcCCCCChhHHHHHHHHcC--C
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-F--VNTSEHDRPIQEVIAEMTN--G  238 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~----~~lg~~~-v--~~~~~~~~~~~~~i~~~~~--~  238 (354)
                      .+.++||+|+ |.+|...+..+...|+ +|+.+++++++.+.+    ++.+... .  .|..+.. .+.+.+.+...  +
T Consensus         9 ~~k~~lItGa~~~iG~~ia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~~   86 (265)
T PRK07097          9 KGKIALITGASYGIGFAIAKAYAKAGA-TIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDED-GVQAMVSQIEKEVG   86 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHH-HHHHHHHHHHHhCC
Confidence            5678999987 9999988888888899 788888887765433    2334322 1  2332221 12222222211  3


Q ss_pred             CccEEEEcccC
Q 018529          239 GVDRSVECTGN  249 (354)
Q Consensus       239 ~~dvv~d~~g~  249 (354)
                      ++|+++.++|.
T Consensus        87 ~id~li~~ag~   97 (265)
T PRK07097         87 VIDILVNNAGI   97 (265)
T ss_pred             CCCEEEECCCC
Confidence            68999999874

>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1

Probab=95.27  E-value=0.0095  Score=47.19  Aligned_cols=97  Identities=21%  Similarity=0.171  Sum_probs=57.5

Q ss_pred             EEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCC----ChhHHHHHHHHcCCCccEEEEccc
Q 018529          173 VAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEH----DRPIQEVIAEMTNGGVDRSVECTG  248 (354)
Q Consensus       173 vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~----~~~~~~~i~~~~~~~~dvv~d~~g  248 (354)
                      |+|+|+|++|.+.+..++..|. .|..+.+.+ +.+.+++-|........+.    .......  ....+.+|+||-|+-
T Consensus         1 I~I~G~GaiG~~~a~~L~~~g~-~V~l~~r~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~D~viv~vK   76 (151)
T PF02558_consen    1 ILIIGAGAIGSLYAARLAQAGH-DVTLVSRSP-RLEAIKEQGLTITGPDGDETVQPPIVISAP--SADAGPYDLVIVAVK   76 (151)
T ss_dssp             EEEESTSHHHHHHHHHHHHTTC-EEEEEESHH-HHHHHHHHCEEEEETTEEEEEEEEEEESSH--GHHHSTESEEEE-SS
T ss_pred             CEEECcCHHHHHHHHHHHHCCC-ceEEEEccc-cHHhhhheeEEEEecccceecccccccCcc--hhccCCCcEEEEEec
Confidence            6899999999998888877888 899998888 7777776554221111000    0000000  111247999999986


Q ss_pred             ChHh---HHHHHHHhhCCCceEEEEcCCC
Q 018529          249 NIDN---MISAFECVHDGWGVAVLVGVPS  274 (354)
Q Consensus       249 ~~~~---~~~~~~~l~~~~g~~v~~g~~~  274 (354)
                      ..+.   ++.+...+.++ ..++++.+..
T Consensus        77 a~~~~~~l~~l~~~~~~~-t~iv~~qNG~  104 (151)
T PF02558_consen   77 AYQLEQALQSLKPYLDPN-TTIVSLQNGM  104 (151)
T ss_dssp             GGGHHHHHHHHCTGEETT-EEEEEESSSS
T ss_pred             ccchHHHHHHHhhccCCC-cEEEEEeCCC
Confidence            5333   23333344554 6777776653

1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....

>PRK11088 rrmA 23S rRNA methyltransferase A; Provisional

Probab=95.27  E-value=0.35  Score=42.50  Aligned_cols=95  Identities=19%  Similarity=0.226  Sum_probs=61.3

Q ss_pred             CCCCeEEEEcCChhHHHHHHHHHHcCC---cEEEEEcCChhhHHHHHhcCCc-eEEcCCCCChhHHHHHHHHcCCCccEE
Q 018529          168 ERGSSVAVFGLGAVGLAAAEGARIAGA---SRIIGVDRSSKRFEEAKKFGVT-DFVNTSEHDRPIQEVIAEMTNGGVDRS  243 (354)
Q Consensus       168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~---~~vi~v~~~~~~~~~~~~lg~~-~v~~~~~~~~~~~~~i~~~~~~~~dvv  243 (354)
                      .+.++||=+|+|. |..+..+++....   ..+++++.+++..+.+++.... ..+..+..+  +     .+..+.+|+|
T Consensus        84 ~~~~~vLDiGcG~-G~~~~~l~~~~~~~~~~~v~giD~s~~~l~~A~~~~~~~~~~~~d~~~--l-----p~~~~sfD~I  155 (272)
T PRK11088         84 EKATALLDIGCGE-GYYTHALADALPEITTMQLFGLDISKVAIKYAAKRYPQVTFCVASSHR--L-----PFADQSLDAI  155 (272)
T ss_pred             CCCCeEEEECCcC-CHHHHHHHHhcccccCCeEEEECCCHHHHHHHHHhCCCCeEEEeeccc--C-----CCcCCceeEE
Confidence            3456778789864 6777777765431   2799999999988888664321 111111110  0     0112369999


Q ss_pred             EEcccChHhHHHHHHHhhCCCceEEEEcC
Q 018529          244 VECTGNIDNMISAFECVHDGWGVAVLVGV  272 (354)
Q Consensus       244 ~d~~g~~~~~~~~~~~l~~~~g~~v~~g~  272 (354)
                      +.... +.......+.|+++ |+++.+..
T Consensus       156 ~~~~~-~~~~~e~~rvLkpg-G~li~~~p  182 (272)
T PRK11088        156 IRIYA-PCKAEELARVVKPG-GIVITVTP  182 (272)
T ss_pred             EEecC-CCCHHHHHhhccCC-CEEEEEeC
Confidence            97654 46778899999997 99987743

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=95.24  E-value=0.21  Score=41.60  Aligned_cols=34  Identities=35%  Similarity=0.476  Sum_probs=30.7

Q ss_pred             CCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCC
Q 018529          170 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS  203 (354)
Q Consensus       170 ~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~  203 (354)
                      ..+|+|+|+|++|...++.+-..|.++++.+|.+
T Consensus        21 ~~~V~IvG~GglGs~ia~~La~~Gvg~i~lvD~D   54 (200)
T TIGR02354        21 QATVAICGLGGLGSNVAINLARAGIGKLILVDFD   54 (200)
T ss_pred             CCcEEEECcCHHHHHHHHHHHHcCCCEEEEECCC
Confidence            4679999999999999999999999889999877

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>PF01564 Spermine_synth: Spermine/spermidine synthase; InterPro: IPR001045 Synonym(s): Spermidine aminopropyltransferase A group of polyamine biosynthetic enzymes involved in the fifth (last) step in the biosynthesis of spermidine from arginine and methionine which includes; spermidine synthase (2

Probab=95.24  E-value=0.034  Score=48.02  Aligned_cols=96  Identities=19%  Similarity=0.150  Sum_probs=64.1

Q ss_pred             CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCC--------c--eEEcCCCCChhHHHHHHHHcCC
Q 018529          169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV--------T--DFVNTSEHDRPIQEVIAEMTNG  238 (354)
Q Consensus       169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~--------~--~v~~~~~~~~~~~~~i~~~~~~  238 (354)
                      ..++|||+|+|. |..+-.+++.....+|.+++.+++-.+.++++-.        .  +++. .    +..+.+++...+
T Consensus        76 ~p~~VLiiGgG~-G~~~~ell~~~~~~~i~~VEiD~~Vv~~a~~~f~~~~~~~~d~r~~i~~-~----Dg~~~l~~~~~~  149 (246)
T PF01564_consen   76 NPKRVLIIGGGD-GGTARELLKHPPVESITVVEIDPEVVELARKYFPEFSEGLDDPRVRIII-G----DGRKFLKETQEE  149 (246)
T ss_dssp             ST-EEEEEESTT-SHHHHHHTTSTT-SEEEEEES-HHHHHHHHHHTHHHHTTGGSTTEEEEE-S----THHHHHHTSSST
T ss_pred             CcCceEEEcCCC-hhhhhhhhhcCCcceEEEEecChHHHHHHHHhchhhccccCCCceEEEE-h----hhHHHHHhccCC
Confidence            679999998755 5556677777766699999999999888877421        0  1221 1    255556664433


Q ss_pred             CccEEE-Eccc---------ChHhHHHHHHHhhCCCceEEEEc
Q 018529          239 GVDRSV-ECTG---------NIDNMISAFECVHDGWGVAVLVG  271 (354)
Q Consensus       239 ~~dvv~-d~~g---------~~~~~~~~~~~l~~~~g~~v~~g  271 (354)
                      .+|+|+ |...         +.+.++.+.++|+++ |.++.-.
T Consensus       150 ~yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~~-Gv~v~~~  191 (246)
T PF01564_consen  150 KYDVIIVDLTDPDGPAPNLFTREFYQLCKRRLKPD-GVLVLQA  191 (246)
T ss_dssp             -EEEEEEESSSTTSCGGGGSSHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             cccEEEEeCCCCCCCcccccCHHHHHHHHhhcCCC-cEEEEEc
Confidence            799997 5443         247788999999998 9888664

5.1.16 from EC), spermine synthase (2.5.1.22 from EC) and putrescine N-methyltransferase (2.1.1.53 from EC) []. The Thermotoga maritima spermidine synthase monomer consists of two domains: an N-terminal domain composed of six beta-strands, and a Rossmann-like C- terminal domain []. The larger C-terminal catalytic core domain consists of a seven-stranded beta-sheet flanked by nine alpha helices. This domain resembles a topology observed in a number of nucleotide and dinucleotide-binding enzymes, and in S-adenosyl-L-methionine (AdoMet)- dependent methyltransferase (MTases) [].; GO: 0003824 catalytic activity; PDB: 2E5W_C 2ZSU_E 2O0L_B 2O05_B 2O06_B 2O07_B 3RW9_B 2PWP_A 2HTE_B 3RIE_B ....

>COG0673 MviM Predicted dehydrogenases and related proteins [General function prediction only]

Probab=95.23  E-value=0.53  Score=42.68  Aligned_cols=135  Identities=20%  Similarity=0.255  Sum_probs=79.9

Q ss_pred             eEEEEcCChhH-HHHHHHHHHcC--CcEEEEEcCChhhHH-HHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcc
Q 018529          172 SVAVFGLGAVG-LAAAEGARIAG--ASRIIGVDRSSKRFE-EAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  247 (354)
Q Consensus       172 ~vlI~G~g~~G-~~a~~~a~~~g--~~~vi~v~~~~~~~~-~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~  247 (354)
                      +|.|+|+|.++ ...+..++..+  ...+-++++++++.+ +++++|....  +.+    +.+.++.   ..+|+|+.++
T Consensus         5 rvgiiG~G~~~~~~~~~~~~~~~~~~~~vav~d~~~~~a~~~a~~~~~~~~--~~~----~~~ll~~---~~iD~V~Iat   75 (342)
T COG0673           5 RVGIIGAGGIAGKAHLPALAALGGGLELVAVVDRDPERAEAFAEEFGIAKA--YTD----LEELLAD---PDIDAVYIAT   75 (342)
T ss_pred             EEEEEcccHHHHHHhHHHHHhCCCceEEEEEecCCHHHHHHHHHHcCCCcc--cCC----HHHHhcC---CCCCEEEEcC
Confidence            67889997554 45666666655  435555678888755 5677887622  222    3222221   2599999999


Q ss_pred             cChHhHHHHHHHhhCCCceEEEEcCCCCCceeecc-hhhhc--cccEEEEEeccCCCCCCCHHHHHHHHHccCCC
Q 018529          248 GNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTK-PINVL--NERTLKGTFFGNYKPRTDLPSVVDMYMNKQLE  319 (354)
Q Consensus       248 g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~-~~~~~--~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~  319 (354)
                      ....+.+.+.++|..  |+=|++.-+.....-... .....  +++.+.-.+  +.+....++++-+++.+|.+.
T Consensus        76 p~~~H~e~~~~AL~a--GkhVl~EKPla~t~~ea~~l~~~a~~~~~~l~v~~--~~Rf~p~~~~~k~li~~g~lG  146 (342)
T COG0673          76 PNALHAELALAALEA--GKHVLCEKPLALTLEEAEELVELARKAGVKLMVGF--NRRFDPAVQALKELIDSGALG  146 (342)
T ss_pred             CChhhHHHHHHHHhc--CCEEEEcCCCCCCHHHHHHHHHHHHHcCCceeeeh--hhhcCHHHHHHHHHHhcCCcC
Confidence            998889999999988  677888755421111111 11111  223332222  122234578888888888553

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=95.23  E-value=0.11  Score=44.35  Aligned_cols=71  Identities=21%  Similarity=0.285  Sum_probs=49.8

Q ss_pred             EEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChh--hHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcccC
Q 018529          173 VAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSK--RFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN  249 (354)
Q Consensus       173 vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~--~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~  249 (354)
                      |+|+|+ |.+|...++.+...+. +|.++.|+..  ....++..|+..+ ..+-.+   .+.+.+... |+|.||.+++.
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~-~V~~l~R~~~~~~~~~l~~~g~~vv-~~d~~~---~~~l~~al~-g~d~v~~~~~~   74 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGF-SVRALVRDPSSDRAQQLQALGAEVV-EADYDD---PESLVAALK-GVDAVFSVTPP   74 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTG-CEEEEESSSHHHHHHHHHHTTTEEE-ES-TT----HHHHHHHHT-TCSEEEEESSC
T ss_pred             CEEECCccHHHHHHHHHHHhCCC-CcEEEEeccchhhhhhhhcccceEe-ecccCC---HHHHHHHHc-CCceEEeecCc
Confidence            789998 9999999999999887 8888888763  4556677888654 332222   233333332 79999998883

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.23  E-value=0.19  Score=43.80  Aligned_cols=78  Identities=19%  Similarity=0.284  Sum_probs=46.8

Q ss_pred             CCCeEEEEcC-C--hhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCceE--EcCCCCChhHHHHHHHHcC--
Q 018529          169 RGSSVAVFGL-G--AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDF--VNTSEHDRPIQEVIAEMTN--  237 (354)
Q Consensus       169 ~~~~vlI~G~-g--~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~~v--~~~~~~~~~~~~~i~~~~~--  237 (354)
                      .++++||+|+ +  ++|.+.++.+...|+ +|+.++++++..+.+++    .+....  .|..+. .++.+.+.+...  
T Consensus         5 ~~k~~lITGas~~~GIG~aia~~la~~G~-~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~~   82 (262)
T PRK07984          5 SGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAED-ASIDAMFAELGKVW   82 (262)
T ss_pred             CCCEEEEeCCCCCccHHHHHHHHHHHCCC-EEEEEecchhHHHHHHHHHhccCCceEeecCCCCH-HHHHHHHHHHHhhc
Confidence            4688999987 3  799998888888899 78887776422223322    232222  233332 123333333222  


Q ss_pred             CCccEEEEccc
Q 018529          238 GGVDRSVECTG  248 (354)
Q Consensus       238 ~~~dvv~d~~g  248 (354)
                      +.+|++++++|
T Consensus        83 g~iD~linnAg   93 (262)
T PRK07984         83 PKFDGFVHSIG   93 (262)
T ss_pred             CCCCEEEECCc
Confidence            46899999987

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=95.23  E-value=0.051  Score=49.61  Aligned_cols=75  Identities=13%  Similarity=0.106  Sum_probs=47.4

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-HhcC----CceE-EcCCCCChhHHHHHHHHcCC-Cc
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFG----VTDF-VNTSEHDRPIQEVIAEMTNG-GV  240 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~~lg----~~~v-~~~~~~~~~~~~~i~~~~~~-~~  240 (354)
                      ++.+|||+|+ |.+|...++.+...|. +|++++++++..... +.++    ...+ .|..+.     +.+.++..+ ++
T Consensus         3 ~~k~ilItGatG~IG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-----~~~~~~~~~~~~   76 (349)
T TIGR02622         3 QGKKVLVTGHTGFKGSWLSLWLLELGA-EVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDA-----AKLRKAIAEFKP   76 (349)
T ss_pred             CCCEEEEECCCChhHHHHHHHHHHCCC-EEEEEeCCCccchhHHHHHhhcCCceEEEccCCCH-----HHHHHHHhhcCC
Confidence            4678999987 9999999999999998 888888766543221 2222    1111 122221     223333333 68


Q ss_pred             cEEEEcccC
Q 018529          241 DRSVECTGN  249 (354)
Q Consensus       241 dvv~d~~g~  249 (354)
                      |+||.+++.
T Consensus        77 d~vih~A~~   85 (349)
T TIGR02622        77 EIVFHLAAQ   85 (349)
T ss_pred             CEEEECCcc
Confidence            999999873

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>smart00846 Gp_dh_N Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain

Probab=95.23  E-value=0.37  Score=38.01  Aligned_cols=102  Identities=23%  Similarity=0.367  Sum_probs=58.2

Q ss_pred             eEEEEcCChhHHHHHHHHHH-cCCcEEEEE-c-CChhhHHHHHh----cCCc-eEEcCCCCC-----h--hH--HHHHHH
Q 018529          172 SVAVFGLGAVGLAAAEGARI-AGASRIIGV-D-RSSKRFEEAKK----FGVT-DFVNTSEHD-----R--PI--QEVIAE  234 (354)
Q Consensus       172 ~vlI~G~g~~G~~a~~~a~~-~g~~~vi~v-~-~~~~~~~~~~~----lg~~-~v~~~~~~~-----~--~~--~~~i~~  234 (354)
                      +|.|+|.|.+|...++.+.. .+. .++++ + .+.+...++-+    .|.. .-+..++..     +  .+  .....+
T Consensus         2 kv~I~G~GriGr~v~~~~~~~~~~-~lvai~d~~~~~~~a~ll~~Ds~hg~~~~~v~~~~~~l~i~g~~i~~~~~~~p~~   80 (149)
T smart00846        2 KVGINGFGRIGRLVLRALLERPDI-EVVAINDLTDPETLAHLLKYDSVHGRFPGEVEVDEDGLIVNGKKIKVLAERDPAN   80 (149)
T ss_pred             EEEEECcCHHHHHHHHHHHhCCCC-EEEEeecCCCHHHHHHHhcccCCCCCCCCcEEEeCCEEEECCEEEEEEecCChHH
Confidence            57899999999988887774 455 44444 4 24455555533    2221 001111100     0  00  001222


Q ss_pred             HcCC--CccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCC
Q 018529          235 MTNG--GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSK  275 (354)
Q Consensus       235 ~~~~--~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~  275 (354)
                      +..+  ++|+|+||+|.-...+.+...+..+ .+-|+++.+..
T Consensus        81 ~~w~~~gvDiVie~tG~f~~~~~~~~hl~~G-akkViisap~~  122 (149)
T smart00846       81 LPWKELGVDIVVECTGKFTTREKASAHLKAG-AKKVIISAPAK  122 (149)
T ss_pred             CcccccCCeEEEeccccccchHHHHHHHHcC-CCEEEeCCCCC
Confidence            2222  8999999998755666777788875 77777876653

GAPDH is a tetrameric NAD-binding enzyme involved in glycolysis and glyconeogenesis. N-terminal domain is a Rossmann NAD(P) binding fold.

>TIGR01532 E4PD_g-proteo D-erythrose-4-phosphate dehydrogenase

Probab=95.22  E-value=0.24  Score=44.52  Aligned_cols=101  Identities=19%  Similarity=0.272  Sum_probs=61.8

Q ss_pred             eEEEEcCChhHHHHHHHHHHcC----CcEEEEEcC--ChhhHHHHHhcCCc--------------eEEcCCCCChhHHHH
Q 018529          172 SVAVFGLGAVGLAAAEGARIAG----ASRIIGVDR--SSKRFEEAKKFGVT--------------DFVNTSEHDRPIQEV  231 (354)
Q Consensus       172 ~vlI~G~g~~G~~a~~~a~~~g----~~~vi~v~~--~~~~~~~~~~lg~~--------------~v~~~~~~~~~~~~~  231 (354)
                      +|.|.|.|.+|...++.+...+    . .|+++..  +.+...++.++...              .+++.+...---...
T Consensus         1 ~IaInGfGrIGR~vlr~l~e~~~~~~~-~vvaInd~~~~~~~ayll~yDS~hg~~~~~v~~~~~~l~v~g~~i~v~~~~~   79 (325)
T TIGR01532         1 RVAINGFGRIGRNVLRALYESGERLGI-EVVALNELADQASMAHLLRYDTSHGRFPGEVKVDGDCLHVNGDCIRVLHSPT   79 (325)
T ss_pred             CEEEECCCHHHHHHHHHHHhcCCCCCe-EEEEEecCCCHHHHHHHHhhCccCCCCCCcEEEeCCEEEECCeEEEEEEcCC
Confidence            4789999999999999888653    4 6666632  33444555443210              011110000000001


Q ss_pred             HHHHcC--CCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCC
Q 018529          232 IAEMTN--GGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS  274 (354)
Q Consensus       232 i~~~~~--~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~  274 (354)
                      ..++..  .++|+||+|+|.....+.+...+..+ ++.|.++.+.
T Consensus        80 p~~~~w~~~gvDiVie~tG~~~s~e~a~~~l~aG-a~~V~~SaP~  123 (325)
T TIGR01532        80 PEALPWRALGVDLVLDCTGVYGNREQGERHIRAG-AKRVLFSHPG  123 (325)
T ss_pred             hhhccccccCCCEEEEccchhccHHHHHHHHHcC-CeEEEecCCC
Confidence            222232  28999999999977788888999986 8888888663

Accordingly, this model is very close to the corresponding models for GAPDH, and those sequences which hit above trusted here invariably hit between trusted and noise to the GAPDH model (TIGR01534). Similarly, it may be found that there are species outside of the gamma proteobacteria which synthesize pyridoxine and have more than one aparrent GAPDH gene of which one may have E4PD activity - this may necessitate a readjustment of these models. Alternatively, some of the GAPDH enzymes may prove to be bifunctional in certain species.

>PRK03612 spermidine synthase; Provisional

Probab=95.22  E-value=0.19  Score=48.46  Aligned_cols=98  Identities=16%  Similarity=0.122  Sum_probs=63.9

Q ss_pred             CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcC-C----------ceEEcCCCCChhHHHHHHHHc
Q 018529          168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG-V----------TDFVNTSEHDRPIQEVIAEMT  236 (354)
Q Consensus       168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg-~----------~~v~~~~~~~~~~~~~i~~~~  236 (354)
                      ++.++||++|+| .|..+..+++.-+..+|++++.+++-.+.+++.. .          .++ .....  |..+.+++. 
T Consensus       296 ~~~~rVL~IG~G-~G~~~~~ll~~~~v~~v~~VEid~~vi~~ar~~~~l~~~~~~~~~dprv-~vi~~--Da~~~l~~~-  370 (521)
T PRK03612        296 ARPRRVLVLGGG-DGLALREVLKYPDVEQVTLVDLDPAMTELARTSPALRALNGGALDDPRV-TVVND--DAFNWLRKL-  370 (521)
T ss_pred             CCCCeEEEEcCC-ccHHHHHHHhCCCcCeEEEEECCHHHHHHHHhCCcchhhhccccCCCce-EEEEC--hHHHHHHhC-
Confidence            556899999886 3666677777655359999999999999988721 0          111 11111  244444432 


Q ss_pred             CCCccEEEEcccC-----------hHhHHHHHHHhhCCCceEEEEc
Q 018529          237 NGGVDRSVECTGN-----------IDNMISAFECVHDGWGVAVLVG  271 (354)
Q Consensus       237 ~~~~dvv~d~~g~-----------~~~~~~~~~~l~~~~g~~v~~g  271 (354)
                      .+.+|+|+-....           .+.++.+.+.|+++ |.++...
T Consensus       371 ~~~fDvIi~D~~~~~~~~~~~L~t~ef~~~~~~~L~pg-G~lv~~~  415 (521)
T PRK03612        371 AEKFDVIIVDLPDPSNPALGKLYSVEFYRLLKRRLAPD-GLLVVQS  415 (521)
T ss_pred             CCCCCEEEEeCCCCCCcchhccchHHHHHHHHHhcCCC-eEEEEec
Confidence            3489999753322           13577889999998 9988654

>PRK08278 short chain dehydrogenase; Provisional

Probab=95.21  E-value=0.12  Score=45.29  Aligned_cols=36  Identities=28%  Similarity=0.413  Sum_probs=30.3

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChh
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSK  205 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~  205 (354)
                      ++.++||+|+ |.+|...+..+...|+ +|++++++.+
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~   41 (273)
T PRK08278          5 SGKTLFITGASRGIGLAIALRAARDGA-NIVIAAKTAE   41 (273)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecccc
Confidence            4678999987 9999998888888899 8888887654

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=95.19  E-value=0.11  Score=44.73  Aligned_cols=83  Identities=18%  Similarity=0.257  Sum_probs=52.0

Q ss_pred             CCCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH----HhcCCce--E--EcCCCCC-hhHHHHHHHH
Q 018529          166 KPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD--F--VNTSEHD-RPIQEVIAEM  235 (354)
Q Consensus       166 ~~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~----~~lg~~~--v--~~~~~~~-~~~~~~i~~~  235 (354)
                      ...++.++||+|+ |.+|...++.+...|+ +|++++++.++.+.+    ++.+...  +  .+....+ .++.+.+..+
T Consensus         8 ~~~~~k~vlItG~~g~iG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~   86 (247)
T PRK08945          8 DLLKDRIILVTGAGDGIGREAALTYARHGA-TVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTI   86 (247)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCC-cEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHH
Confidence            3557889999987 9999998888888899 889998887664433    2333221  1  2332111 1233322222


Q ss_pred             cC--CCccEEEEcccC
Q 018529          236 TN--GGVDRSVECTGN  249 (354)
Q Consensus       236 ~~--~~~dvv~d~~g~  249 (354)
                      ..  +.+|.++.++|.
T Consensus        87 ~~~~~~id~vi~~Ag~  102 (247)
T PRK08945         87 EEQFGRLDGVLHNAGL  102 (247)
T ss_pred             HHHhCCCCEEEECCcc
Confidence            21  368999998764

>PRK14903 16S rRNA methyltransferase B; Provisional

Probab=95.18  E-value=0.33  Score=45.65  Aligned_cols=103  Identities=18%  Similarity=0.260  Sum_probs=64.9

Q ss_pred             hcCCCCCCeEEEEcCChhHHHHHHHHHHcC-CcEEEEEcCChhhHHHHHh----cCCceEEcCCCCChhHHHHHHHHcCC
Q 018529          164 VAKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTNG  238 (354)
Q Consensus       164 ~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g-~~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~~~~~  238 (354)
                      ..++++|++||=.|+|+ |..+++++..++ ...|++++.++++.+.+++    +|...+... ..+  .. .+.....+
T Consensus       232 ~l~~~~g~~VLD~cagp-Ggkt~~la~~~~~~g~V~a~Dis~~rl~~~~~n~~r~g~~~v~~~-~~D--a~-~l~~~~~~  306 (431)
T PRK14903        232 LMELEPGLRVLDTCAAP-GGKTTAIAELMKDQGKILAVDISREKIQLVEKHAKRLKLSSIEIK-IAD--AE-RLTEYVQD  306 (431)
T ss_pred             HhCCCCCCEEEEeCCCc-cHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHcCCCeEEEE-ECc--hh-hhhhhhhc
Confidence            45788999988887764 555666677662 2399999999999888754    676542111 111  11 11112234


Q ss_pred             CccEEEE---cccC-------------------------hHhHHHHHHHhhCCCceEEEEcC
Q 018529          239 GVDRSVE---CTGN-------------------------IDNMISAFECVHDGWGVAVLVGV  272 (354)
Q Consensus       239 ~~dvv~d---~~g~-------------------------~~~~~~~~~~l~~~~g~~v~~g~  272 (354)
                      .||.|+-   |.|.                         .+.+..+++.|+++ |+++..-.
T Consensus       307 ~fD~Vl~DaPCsg~G~~~~~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpG-G~LvYsTC  367 (431)
T PRK14903        307 TFDRILVDAPCTSLGTARNHPEVLRRVNKEDFKKLSEIQLRIVSQAWKLLEKG-GILLYSTC  367 (431)
T ss_pred             cCCEEEECCCCCCCccccCChHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEEEC
Confidence            6999984   3332                         12367888899997 99876543

>PRK08303 short chain dehydrogenase; Provisional

Probab=95.17  E-value=0.17  Score=45.29  Aligned_cols=34  Identities=32%  Similarity=0.330  Sum_probs=29.7

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCC
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRS  203 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~  203 (354)
                      .++++||+|+ +++|.+.++.+...|+ +|+.++++
T Consensus         7 ~~k~~lITGgs~GIG~aia~~la~~G~-~Vv~~~r~   41 (305)
T PRK08303          7 RGKVALVAGATRGAGRGIAVELGAAGA-TVYVTGRS   41 (305)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecc
Confidence            4789999987 8999999998888999 88888776

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=95.16  E-value=0.12  Score=51.69  Aligned_cols=114  Identities=22%  Similarity=0.305  Sum_probs=67.5

Q ss_pred             cceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhcCCCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEc
Q 018529          123 TFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVD  201 (354)
Q Consensus       123 ~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~  201 (354)
                      +..+|..+++...+.+ +..+.+++=.-.         + -....-.++++||+|+ |.+|...++.+...|+ +|++++
T Consensus       378 ~~~~~~~~~~~~~f~~-eyw~~e~~kl~~---------~-~~~~~l~gkvvLVTGasggIG~aiA~~La~~Ga-~Vvi~~  445 (676)
T TIGR02632       378 AVSEYVSLPEQEAFDI-EYWPLEEAKLRR---------M-PKEKTLARRVAFVTGGAGGIGRETARRLAAEGA-HVVLAD  445 (676)
T ss_pred             cccceecCchhhccch-hhhhhhHHhhcc---------C-CCCcCCCCCEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEe
Confidence            3456666777777766 555555542110         0 0011124789999987 9999999988888899 899998


Q ss_pred             CChhhHHHHH-h----cCCce--E--EcCCCCChhHHHHHHHHc--CCCccEEEEcccC
Q 018529          202 RSSKRFEEAK-K----FGVTD--F--VNTSEHDRPIQEVIAEMT--NGGVDRSVECTGN  249 (354)
Q Consensus       202 ~~~~~~~~~~-~----lg~~~--v--~~~~~~~~~~~~~i~~~~--~~~~dvv~d~~g~  249 (354)
                      ++.++.+.+. +    .+...  .  .|..+. ..+.+.+.+..  -+++|++++++|.
T Consensus       446 r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~-~~v~~a~~~i~~~~g~iDilV~nAG~  503 (676)
T TIGR02632       446 LNLEAAEAVAAEINGQFGAGRAVALKMDVTDE-QAVKAAFADVALAYGGVDIVVNNAGI  503 (676)
T ss_pred             CCHHHHHHHHHHHHhhcCCCcEEEEECCCCCH-HHHHHHHHHHHHhcCCCcEEEECCCC
Confidence            8887655432 2    23211  1  233222 12333333322  2479999999874

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=95.16  E-value=0.14  Score=47.55  Aligned_cols=74  Identities=22%  Similarity=0.305  Sum_probs=47.7

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH-hcCCc-eE--EcCCCCChhHHHHHHHHcCCCccEE
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVT-DF--VNTSEHDRPIQEVIAEMTNGGVDRS  243 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~-~lg~~-~v--~~~~~~~~~~~~~i~~~~~~~~dvv  243 (354)
                      .+++++|+|+ |++|.+.+..+...|+ +|+++++++++.+... +.+.. ..  .|..+.     +.+.+.. +++|++
T Consensus       177 ~gK~VLITGASgGIG~aLA~~La~~G~-~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~-----~~v~~~l-~~IDiL  249 (406)
T PRK07424        177 KGKTVAVTGASGTLGQALLKELHQQGA-KVVALTSNSDKITLEINGEDLPVKTLHWQVGQE-----AALAELL-EKVDIL  249 (406)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCH-----HHHHHHh-CCCCEE
Confidence            4689999987 9999999888888899 8888888776654321 11111 12  222221     2233322 369999


Q ss_pred             EEcccC
Q 018529          244 VECTGN  249 (354)
Q Consensus       244 ~d~~g~  249 (354)
                      ++++|.
T Consensus       250 InnAGi  255 (406)
T PRK07424        250 IINHGI  255 (406)
T ss_pred             EECCCc
Confidence            998764

>PRK06484 short chain dehydrogenase; Validated

Probab=95.15  E-value=0.12  Score=49.96  Aligned_cols=79  Identities=27%  Similarity=0.394  Sum_probs=53.6

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-HhcCCce---EEcCCCCChhHHHHHHHHc--CCCcc
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTD---FVNTSEHDRPIQEVIAEMT--NGGVD  241 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~~lg~~~---v~~~~~~~~~~~~~i~~~~--~~~~d  241 (354)
                      +++++||+|+ +++|.+.++.+...|+ +|+.++++.++.+.+ ++++...   ..|..+.+ ++.+.+.+..  .+++|
T Consensus         4 ~~k~~lITGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~g~iD   81 (520)
T PRK06484          4 QSRVVLVTGAAGGIGRAACQRFARAGD-QVVVADRNVERARERADSLGPDHHALAMDVSDEA-QIREGFEQLHREFGRID   81 (520)
T ss_pred             CCeEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHH-HHHHHHHHHHHHhCCCC
Confidence            5788999987 9999999999889999 899998888876544 4455432   23333321 2333333322  14799


Q ss_pred             EEEEcccC
Q 018529          242 RSVECTGN  249 (354)
Q Consensus       242 vv~d~~g~  249 (354)
                      ++++++|.
T Consensus        82 ~li~nag~   89 (520)
T PRK06484         82 VLVNNAGV   89 (520)
T ss_pred             EEEECCCc
Confidence            99998874

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.15  E-value=0.14  Score=44.14  Aligned_cols=80  Identities=28%  Similarity=0.284  Sum_probs=47.7

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEE-EcCChhhHHH----HHhcCCce-EEcCCCCC-hhHHHHHHHHc--CC
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIG-VDRSSKRFEE----AKKFGVTD-FVNTSEHD-RPIQEVIAEMT--NG  238 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~-v~~~~~~~~~----~~~lg~~~-v~~~~~~~-~~~~~~i~~~~--~~  238 (354)
                      ++.++||+|+ |.+|...+..+...|+ +|+. ..++.++.+.    +++.+... .+..+-.+ ..+.+.+.+..  .+
T Consensus         3 ~~~~vlItGa~g~iG~~~a~~l~~~g~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (250)
T PRK08063          3 SGKVALVTGSSRGIGKAIALRLAEEGY-DIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFG   81 (250)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4678999987 9999999999988998 6554 4666655433    23334322 22122112 12333333322  13


Q ss_pred             CccEEEEcccC
Q 018529          239 GVDRSVECTGN  249 (354)
Q Consensus       239 ~~dvv~d~~g~  249 (354)
                      ++|+++.++|.
T Consensus        82 ~id~vi~~ag~   92 (250)
T PRK08063         82 RLDVFVNNAAS   92 (250)
T ss_pred             CCCEEEECCCC
Confidence            68999998873

>PRK06523 short chain dehydrogenase; Provisional

Probab=95.14  E-value=0.1  Score=45.23  Aligned_cols=75  Identities=27%  Similarity=0.287  Sum_probs=46.3

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCce-EEcCCCCC--hhHHHHHHHHcCCCccEEE
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD-FVNTSEHD--RPIQEVIAEMTNGGVDRSV  244 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~-v~~~~~~~--~~~~~~i~~~~~~~~dvv~  244 (354)
                      +++++||+|+ |.+|...++.+...|+ +|++++++.+...   .-.... ..|..+.+  ..+.+.+.+. .+++|+++
T Consensus         8 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~r~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~id~vi   82 (260)
T PRK06523          8 AGKRALVTGGTKGIGAATVARLLEAGA-RVVTTARSRPDDL---PEGVEFVAADLTTAEGCAAVARAVLER-LGGVDILV   82 (260)
T ss_pred             CCCEEEEECCCCchhHHHHHHHHHCCC-EEEEEeCChhhhc---CCceeEEecCCCCHHHHHHHHHHHHHH-cCCCCEEE
Confidence            4789999987 9999999888888899 8998888765321   111111 12332221  1122222222 13689999


Q ss_pred             Eccc
Q 018529          245 ECTG  248 (354)
Q Consensus       245 d~~g  248 (354)
                      +++|
T Consensus        83 ~~ag   86 (260)
T PRK06523         83 HVLG   86 (260)
T ss_pred             ECCc
Confidence            9887

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=95.14  E-value=0.15  Score=47.07  Aligned_cols=35  Identities=29%  Similarity=0.284  Sum_probs=31.8

Q ss_pred             CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCC
Q 018529          169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS  203 (354)
Q Consensus       169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~  203 (354)
                      .+.+|+|+|+|++|..++..+...|.++++.++.+
T Consensus       134 ~~~~VlvvG~GG~Gs~ia~~La~~Gvg~i~lvD~d  168 (376)
T PRK08762        134 LEARVLLIGAGGLGSPAALYLAAAGVGTLGIVDHD  168 (376)
T ss_pred             hcCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            56689999999999999999999999999999887

>PRK05708 2-dehydropantoate 2-reductase; Provisional

Probab=95.13  E-value=0.11  Score=46.60  Aligned_cols=98  Identities=15%  Similarity=0.142  Sum_probs=57.1

Q ss_pred             eEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhc-CCceEEcCCCCChhHHH-HHHHHcCCCccEEEEcccC
Q 018529          172 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF-GVTDFVNTSEHDRPIQE-VIAEMTNGGVDRSVECTGN  249 (354)
Q Consensus       172 ~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~l-g~~~v~~~~~~~~~~~~-~i~~~~~~~~dvv~d~~g~  249 (354)
                      +|+|+|+|++|......+...|. .|+.+++.+++.+.+++- |. .+....+. ..+.- .......+.+|+||-|+=+
T Consensus         4 ~I~IiGaGaiG~~~a~~L~~~G~-~V~lv~r~~~~~~~i~~~~Gl-~i~~~g~~-~~~~~~~~~~~~~~~~D~viv~vK~   80 (305)
T PRK05708          4 TWHILGAGSLGSLWACRLARAGL-PVRLILRDRQRLAAYQQAGGL-TLVEQGQA-SLYAIPAETADAAEPIHRLLLACKA   80 (305)
T ss_pred             eEEEECCCHHHHHHHHHHHhCCC-CeEEEEechHHHHHHhhcCCe-EEeeCCcc-eeeccCCCCcccccccCEEEEECCH
Confidence            58999999999887766667787 888898988777777653 43 12111110 00000 0000011368999988744


Q ss_pred             hH---hHHHHHHHhhCCCceEEEEcCC
Q 018529          250 ID---NMISAFECVHDGWGVAVLVGVP  273 (354)
Q Consensus       250 ~~---~~~~~~~~l~~~~g~~v~~g~~  273 (354)
                      .+   .+..+...+.++ ..++.+.+.
T Consensus        81 ~~~~~al~~l~~~l~~~-t~vv~lQNG  106 (305)
T PRK05708         81 YDAEPAVASLAHRLAPG-AELLLLQNG  106 (305)
T ss_pred             HhHHHHHHHHHhhCCCC-CEEEEEeCC
Confidence            32   233344455666 677766654

>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=95.13  E-value=0.22  Score=45.11  Aligned_cols=93  Identities=18%  Similarity=0.042  Sum_probs=62.1

Q ss_pred             eEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEE-cC---C---CCChhHHHHHHHHcCCCccEEE
Q 018529          172 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFV-NT---S---EHDRPIQEVIAEMTNGGVDRSV  244 (354)
Q Consensus       172 ~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~-~~---~---~~~~~~~~~i~~~~~~~~dvv~  244 (354)
                      +|.|+|+|.+|.+.+..+...|. .|.+.++++++.+.+++.+..... ..   .   ....+..+.+     +..|+|+
T Consensus         6 ~I~iIG~G~mG~~ia~~L~~~G~-~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~e~~-----~~aD~Vi   79 (328)
T PRK14618          6 RVAVLGAGAWGTALAVLAASKGV-PVRLWARRPEFAAALAAERENREYLPGVALPAELYPTADPEEAL-----AGADFAV   79 (328)
T ss_pred             eEEEECcCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCCHHHHH-----cCCCEEE
Confidence            68999999999998888888888 899999998887777654211000 00   0   0000122222     2589999


Q ss_pred             EcccChHhHHHHHHHhhCCCceEEEEcC
Q 018529          245 ECTGNIDNMISAFECVHDGWGVAVLVGV  272 (354)
Q Consensus       245 d~~g~~~~~~~~~~~l~~~~g~~v~~g~  272 (354)
                      .++... .++..++.++++ -.++.+..
T Consensus        80 ~~v~~~-~~~~v~~~l~~~-~~vi~~~~  105 (328)
T PRK14618         80 VAVPSK-ALRETLAGLPRA-LGYVSCAK  105 (328)
T ss_pred             EECchH-HHHHHHHhcCcC-CEEEEEee
Confidence            999884 567777888875 66666654

>PRK12747 short chain dehydrogenase; Provisional

Probab=95.12  E-value=0.44  Score=41.08  Aligned_cols=104  Identities=15%  Similarity=0.121  Sum_probs=59.7

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEc-CChhhHH-HHH---hcCCce-E--EcCCCCC--hhHHHHHHHH--
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVD-RSSKRFE-EAK---KFGVTD-F--VNTSEHD--RPIQEVIAEM--  235 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~-~~~~~~~-~~~---~lg~~~-v--~~~~~~~--~~~~~~i~~~--  235 (354)
                      .+.++||+|+ |.+|.+.++.+...|+ +|+.+. +++++.+ ...   +.+... .  .|..+.+  ..+.+.+.+.  
T Consensus         3 ~~k~~lItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (252)
T PRK12747          3 KGKVALVTGASRGIGRAIAKRLANDGA-LVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ   81 (252)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhh
Confidence            4678999987 9999999999888999 676653 4444433 222   223221 1  1222211  1122223221  


Q ss_pred             --cC-CCccEEEEcccCh----------H---------------hHHHHHHHhhCCCceEEEEcCCC
Q 018529          236 --TN-GGVDRSVECTGNI----------D---------------NMISAFECVHDGWGVAVLVGVPS  274 (354)
Q Consensus       236 --~~-~~~dvv~d~~g~~----------~---------------~~~~~~~~l~~~~g~~v~~g~~~  274 (354)
                        .. +++|++++++|..          +               ..+.++..+... |++++++...
T Consensus        82 ~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~-g~iv~isS~~  147 (252)
T PRK12747         82 NRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDN-SRIINISSAA  147 (252)
T ss_pred             hhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcC-CeEEEECCcc
Confidence              11 2699999988731          0               112344555666 8999888654

>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]

Probab=95.11  E-value=0.55  Score=39.36  Aligned_cols=96  Identities=19%  Similarity=0.171  Sum_probs=63.0

Q ss_pred             CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCCh-hhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcc
Q 018529          169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS-KRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  247 (354)
Q Consensus       169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~  247 (354)
                      .|.+|||+|+|.+|.-=+.+....|+ +|+++.... +....+.+-+--..+. ...+      ...+  .++++||-++
T Consensus        11 ~~k~VlvvGgG~va~rKa~~ll~~ga-~v~Vvs~~~~~el~~~~~~~~i~~~~-~~~~------~~~~--~~~~lviaAt   80 (210)
T COG1648          11 EGKKVLVVGGGSVALRKARLLLKAGA-DVTVVSPEFEPELKALIEEGKIKWIE-REFD------AEDL--DDAFLVIAAT   80 (210)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhcCC-EEEEEcCCccHHHHHHHHhcCcchhh-cccC------hhhh--cCceEEEEeC
Confidence            56799999999999999999999999 777775544 3333232222211111 1111      0111  1489999999


Q ss_pred             cChHhHHHHHHHhhCCCceEEEEcCCCC
Q 018529          248 GNIDNMISAFECVHDGWGVAVLVGVPSK  275 (354)
Q Consensus       248 g~~~~~~~~~~~l~~~~g~~v~~g~~~~  275 (354)
                      +.++.-+...+..... +.+|...+...
T Consensus        81 ~d~~ln~~i~~~a~~~-~i~vNv~D~p~  107 (210)
T COG1648          81 DDEELNERIAKAARER-RILVNVVDDPE  107 (210)
T ss_pred             CCHHHHHHHHHHHHHh-CCceeccCCcc
Confidence            9977777777778786 88887766553

>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase

Probab=95.08  E-value=0.23  Score=44.06  Aligned_cols=70  Identities=16%  Similarity=0.144  Sum_probs=49.6

Q ss_pred             eEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcccChH
Q 018529          172 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNID  251 (354)
Q Consensus       172 ~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~~~  251 (354)
                      +|.|+|.|.+|...+..+...|. .|++.++++++.+.+.+.|....   .  +  ..+.++     ..|+||.|+....
T Consensus         1 ~IgvIG~G~mG~~iA~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~---~--~--~~~~~~-----~aDivi~~vp~~~   67 (291)
T TIGR01505         1 KVGFIGLGIMGSPMSINLAKAGY-QLHVTTIGPEVADELLAAGAVTA---E--T--ARQVTE-----QADVIFTMVPDSP   67 (291)
T ss_pred             CEEEEEecHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCccc---C--C--HHHHHh-----cCCEEEEecCCHH
Confidence            37788999999988887778898 89999999999988887775321   1  1  222221     3688888877644


Q ss_pred             hHH
Q 018529          252 NMI  254 (354)
Q Consensus       252 ~~~  254 (354)
                      ...
T Consensus        68 ~~~   70 (291)
T TIGR01505        68 QVE   70 (291)
T ss_pred             HHH
Confidence            433

This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.

>PLN02233 ubiquinone biosynthesis methyltransferase

Probab=95.07  E-value=0.32  Score=42.44  Aligned_cols=103  Identities=16%  Similarity=0.227  Sum_probs=67.1

Q ss_pred             hhcCCCCCCeEEEEcCChhHHHHHHHHHHcCC-cEEEEEcCChhhHHHHHhc-C------CceE--EcCCCCChhHHHHH
Q 018529          163 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKKF-G------VTDF--VNTSEHDRPIQEVI  232 (354)
Q Consensus       163 ~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~-~~vi~v~~~~~~~~~~~~l-g------~~~v--~~~~~~~~~~~~~i  232 (354)
                      +...++++++||-+|+|. |..+..+++..+. .+|+++|.+++-.+.+++. .      ...+  +..+..+      +
T Consensus        67 ~~~~~~~~~~VLDlGcGt-G~~~~~la~~~~~~~~V~gvD~S~~ml~~A~~r~~~~~~~~~~~i~~~~~d~~~------l  139 (261)
T PLN02233         67 SWSGAKMGDRVLDLCCGS-GDLAFLLSEKVGSDGKVMGLDFSSEQLAVAASRQELKAKSCYKNIEWIEGDATD------L  139 (261)
T ss_pred             HHhCCCCCCEEEEECCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHhhhhhhccCCCeEEEEccccc------C
Confidence            345678899999999864 5677778877653 2899999999988877542 1      1111  1111100      0


Q ss_pred             HHHcCCCccEEEEccc------ChHhHHHHHHHhhCCCceEEEEcCCC
Q 018529          233 AEMTNGGVDRSVECTG------NIDNMISAFECVHDGWGVAVLVGVPS  274 (354)
Q Consensus       233 ~~~~~~~~dvv~d~~g------~~~~~~~~~~~l~~~~g~~v~~g~~~  274 (354)
                       .+.++.||+|+...+      ....+..+.+.|+++ |++++.....
T Consensus       140 -p~~~~sfD~V~~~~~l~~~~d~~~~l~ei~rvLkpG-G~l~i~d~~~  185 (261)
T PLN02233        140 -PFDDCYFDAITMGYGLRNVVDRLKAMQEMYRVLKPG-SRVSILDFNK  185 (261)
T ss_pred             -CCCCCCEeEEEEecccccCCCHHHHHHHHHHHcCcC-cEEEEEECCC
Confidence             011236999976432      124688899999997 9998886554

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=95.06  E-value=0.18  Score=44.29  Aligned_cols=75  Identities=17%  Similarity=0.168  Sum_probs=45.3

Q ss_pred             EEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh-c----C---CceE--EcCCCCChhHHHHHHHHcCC-Cc
Q 018529          173 VAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-F----G---VTDF--VNTSEHDRPIQEVIAEMTNG-GV  240 (354)
Q Consensus       173 vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~-l----g---~~~v--~~~~~~~~~~~~~i~~~~~~-~~  240 (354)
                      |||+|+ |.+|...+.-+...+..+++.+++++.++-.+++ +    .   ....  ....+-.  -.+.+.+.... ++
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvr--d~~~l~~~~~~~~p   78 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVR--DKERLNRIFEEYKP   78 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCC--HHHHHHHHTT--T-
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeeccc--CHHHHHHHHhhcCC
Confidence            799987 9999998888888888799999999988776643 4    1   1111  1112221  33456666555 89


Q ss_pred             cEEEEcccC
Q 018529          241 DRSVECTGN  249 (354)
Q Consensus       241 dvv~d~~g~  249 (354)
                      |+||.++.-
T Consensus        79 diVfHaAA~   87 (293)
T PF02719_consen   79 DIVFHAAAL   87 (293)
T ss_dssp             SEEEE----
T ss_pred             CEEEEChhc
Confidence            999998764

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PRK07791 short chain dehydrogenase; Provisional

Probab=95.06  E-value=0.25  Score=43.76  Aligned_cols=80  Identities=24%  Similarity=0.267  Sum_probs=48.2

Q ss_pred             CCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCCh---------hhHH-HHH---hcCCce-E--EcCCCCChhHHH
Q 018529          168 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS---------KRFE-EAK---KFGVTD-F--VNTSEHDRPIQE  230 (354)
Q Consensus       168 ~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~---------~~~~-~~~---~lg~~~-v--~~~~~~~~~~~~  230 (354)
                      -+++++||+|+ +++|...++.+...|+ +|+.++++.         ++.+ .++   +.+... .  .|..+.+ +..+
T Consensus         4 l~~k~~lITGas~GIG~aia~~la~~G~-~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~-~v~~   81 (286)
T PRK07791          4 LDGRVVIVTGAGGGIGRAHALAFAAEGA-RVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWD-GAAN   81 (286)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHH-HHHH
Confidence            45789999987 9999998888888899 777776553         3322 222   234322 1  2332221 2233


Q ss_pred             HHHHHc--CCCccEEEEcccC
Q 018529          231 VIAEMT--NGGVDRSVECTGN  249 (354)
Q Consensus       231 ~i~~~~--~~~~dvv~d~~g~  249 (354)
                      .+++..  .+.+|++++++|.
T Consensus        82 ~~~~~~~~~g~id~lv~nAG~  102 (286)
T PRK07791         82 LVDAAVETFGGLDVLVNNAGI  102 (286)
T ss_pred             HHHHHHHhcCCCCEEEECCCC
Confidence            333322  1479999998874

>PRK07102 short chain dehydrogenase; Provisional

Probab=95.05  E-value=0.24  Score=42.43  Aligned_cols=76  Identities=17%  Similarity=0.217  Sum_probs=47.8

Q ss_pred             CeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCce--EE--cCCCCChhHHHHHHHHcCCCcc
Q 018529          171 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD--FV--NTSEHDRPIQEVIAEMTNGGVD  241 (354)
Q Consensus       171 ~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~~--v~--~~~~~~~~~~~~i~~~~~~~~d  241 (354)
                      .+++|+|+ |.+|...++.+...|+ +|+++++++++.+.+.+    .+...  ++  |..+. .++.+.+.+.. ..+|
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~-~~~d   78 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGA-RLYLAARDVERLERLADDLRARGAVAVSTHELDILDT-ASHAAFLDSLP-ALPD   78 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCCh-HHHHHHHHHHh-hcCC
Confidence            47899987 9999999998888898 89999998876654321    11112  12  22221 12333333332 2579


Q ss_pred             EEEEcccC
Q 018529          242 RSVECTGN  249 (354)
Q Consensus       242 vv~d~~g~  249 (354)
                      +++.++|.
T Consensus        79 ~vv~~ag~   86 (243)
T PRK07102         79 IVLIAVGT   86 (243)
T ss_pred             EEEECCcC
Confidence            99987764

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=95.00  E-value=0.32  Score=44.02  Aligned_cols=87  Identities=21%  Similarity=0.211  Sum_probs=58.7

Q ss_pred             CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEccc
Q 018529          169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  248 (354)
Q Consensus       169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g  248 (354)
                      .|.+|.|+|.|.+|...++.++.+|. +|++.+++.+.....    .    .+.. +  +.+.+.     ..|+|+.+++
T Consensus       145 ~g~~VgIIG~G~IG~~vA~~L~~~G~-~V~~~d~~~~~~~~~----~----~~~~-~--l~ell~-----~aDiVil~lP  207 (330)
T PRK12480        145 KNMTVAIIGTGRIGAATAKIYAGFGA-TITAYDAYPNKDLDF----L----TYKD-S--VKEAIK-----DADIISLHVP  207 (330)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCChhHhhhh----h----hccC-C--HHHHHh-----cCCEEEEeCC
Confidence            56789999999999999999999999 999998876543211    0    0111 1  333222     4799998887


Q ss_pred             ChH-----hHHHHHHHhhCCCceEEEEcCC
Q 018529          249 NID-----NMISAFECVHDGWGVAVLVGVP  273 (354)
Q Consensus       249 ~~~-----~~~~~~~~l~~~~g~~v~~g~~  273 (354)
                      ...     .....+..++++ ..++.++..
T Consensus       208 ~t~~t~~li~~~~l~~mk~g-avlIN~aRG  236 (330)
T PRK12480        208 ANKESYHLFDKAMFDHVKKG-AILVNAARG  236 (330)
T ss_pred             CcHHHHHHHhHHHHhcCCCC-cEEEEcCCc
Confidence            543     223455677886 777777654

>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate

Probab=94.99  E-value=0.25  Score=39.44  Aligned_cols=80  Identities=19%  Similarity=0.199  Sum_probs=54.4

Q ss_pred             eEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCc-----------eEEcCCCCChhHHHHHHHHcCCCc
Q 018529          172 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT-----------DFVNTSEHDRPIQEVIAEMTNGGV  240 (354)
Q Consensus       172 ~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~-----------~v~~~~~~~~~~~~~i~~~~~~~~  240 (354)
                      +|.|+|+|..|.+.+..+...|. .|..-.++++..+.+++-+..           .+...    .++.+.+     .+.
T Consensus         1 KI~ViGaG~~G~AlA~~la~~g~-~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i~~t----~dl~~a~-----~~a   70 (157)
T PF01210_consen    1 KIAVIGAGNWGTALAALLADNGH-EVTLWGRDEEQIEEINETRQNPKYLPGIKLPENIKAT----TDLEEAL-----EDA   70 (157)
T ss_dssp             EEEEESSSHHHHHHHHHHHHCTE-EEEEETSCHHHHHHHHHHTSETTTSTTSBEETTEEEE----SSHHHHH-----TT-
T ss_pred             CEEEECcCHHHHHHHHHHHHcCC-EEEEEeccHHHHHHHHHhCCCCCCCCCcccCcccccc----cCHHHHh-----Ccc
Confidence            57899999999999999999997 999999999888777653221           11111    1244444     257


Q ss_pred             cEEEEcccChHhHHHHHHHhhC
Q 018529          241 DRSVECTGNIDNMISAFECVHD  262 (354)
Q Consensus       241 dvv~d~~g~~~~~~~~~~~l~~  262 (354)
                      |+++-++.+ ..++..++.+++
T Consensus        71 d~IiiavPs-~~~~~~~~~l~~   91 (157)
T PF01210_consen   71 DIIIIAVPS-QAHREVLEQLAP   91 (157)
T ss_dssp             SEEEE-S-G-GGHHHHHHHHTT
T ss_pred             cEEEecccH-HHHHHHHHHHhh
Confidence            999999987 556666666655

This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....

>PRK14902 16S rRNA methyltransferase B; Provisional

Probab=94.98  E-value=0.25  Score=46.75  Aligned_cols=103  Identities=17%  Similarity=0.331  Sum_probs=63.1

Q ss_pred             hhcCCCCCCeEEEEcCChhHHHHHHHHHHc-CCcEEEEEcCChhhHHHHHh----cCCceEEcCCCCChhHHHHHHHHcC
Q 018529          163 NVAKPERGSSVAVFGLGAVGLAAAEGARIA-GASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTN  237 (354)
Q Consensus       163 ~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~-g~~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~~~~  237 (354)
                      ....++++++||=.|+|+ |..++.+++.. +...|++++.++++.+.+++    +|...+. ....+  ..+....+ .
T Consensus       244 ~~l~~~~g~~VLDlgaG~-G~~t~~la~~~~~~~~v~avDi~~~~l~~~~~n~~~~g~~~v~-~~~~D--~~~~~~~~-~  318 (444)
T PRK14902        244 PALDPKGGDTVLDACAAP-GGKTTHIAELLKNTGKVVALDIHEHKLKLIEENAKRLGLTNIE-TKALD--ARKVHEKF-A  318 (444)
T ss_pred             HHhCCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEE-EEeCC--cccccchh-c
Confidence            345678899888887754 55555666665 22389999999998877643    5665421 11111  11111111 1


Q ss_pred             CCccEEEE---cccC-------------------------hHhHHHHHHHhhCCCceEEEEc
Q 018529          238 GGVDRSVE---CTGN-------------------------IDNMISAFECVHDGWGVAVLVG  271 (354)
Q Consensus       238 ~~~dvv~d---~~g~-------------------------~~~~~~~~~~l~~~~g~~v~~g  271 (354)
                      +.||.|+-   |.|.                         ...+..+++.|+++ |+++...
T Consensus       319 ~~fD~Vl~D~Pcsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpG-G~lvyst  379 (444)
T PRK14902        319 EKFDKILVDAPCSGLGVIRRKPDIKYNKTKEDIESLQEIQLEILESVAQYLKKG-GILVYST  379 (444)
T ss_pred             ccCCEEEEcCCCCCCeeeccCcchhhcCCHHHHHHHHHHHHHHHHHHHHHcCCC-CEEEEEc
Confidence            46999974   3321                         13577788899997 9988543

>PF01209 Ubie_methyltran: ubiE/COQ5 methyltransferase family; InterPro: IPR004033 A number of methyltransferases have been shown to share regions of similarities []

Probab=94.97  E-value=0.078  Score=45.36  Aligned_cols=104  Identities=22%  Similarity=0.343  Sum_probs=62.8

Q ss_pred             hhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCC-cEEEEEcCChhhHHHHHh----cCCceE--EcCCCCChhHHHHHHH
Q 018529          162 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKK----FGVTDF--VNTSEHDRPIQEVIAE  234 (354)
Q Consensus       162 ~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~-~~vi~v~~~~~~~~~~~~----lg~~~v--~~~~~~~~~~~~~i~~  234 (354)
                      .+....++|++||=+|+|. |..+..+++..+. .+|+++|.+++-++.+++    .+...+  +..+..+  +.     
T Consensus        40 ~~~~~~~~g~~vLDv~~Gt-G~~~~~l~~~~~~~~~v~~vD~s~~ML~~a~~k~~~~~~~~i~~v~~da~~--lp-----  111 (233)
T PF01209_consen   40 IKLLGLRPGDRVLDVACGT-GDVTRELARRVGPNGKVVGVDISPGMLEVARKKLKREGLQNIEFVQGDAED--LP-----  111 (233)
T ss_dssp             HHHHT--S--EEEEET-TT-SHHHHHHGGGSS---EEEEEES-HHHHHHHHHHHHHTT--SEEEEE-BTTB---------
T ss_pred             HhccCCCCCCEEEEeCCCh-HHHHHHHHHHCCCccEEEEecCCHHHHHHHHHHHHhhCCCCeeEEEcCHHH--hc-----
Confidence            3445788999999998764 7788888888763 299999999988887754    233222  1111111  10     


Q ss_pred             HcCCCccEEEEcccC------hHhHHHHHHHhhCCCceEEEEcCCC
Q 018529          235 MTNGGVDRSVECTGN------IDNMISAFECVHDGWGVAVLVGVPS  274 (354)
Q Consensus       235 ~~~~~~dvv~d~~g~------~~~~~~~~~~l~~~~g~~v~~g~~~  274 (354)
                      +.++.||+|..+.|-      ...+.++.+.|+|+ |+++.+....
T Consensus       112 ~~d~sfD~v~~~fglrn~~d~~~~l~E~~RVLkPG-G~l~ile~~~  156 (233)
T PF01209_consen  112 FPDNSFDAVTCSFGLRNFPDRERALREMYRVLKPG-GRLVILEFSK  156 (233)
T ss_dssp             S-TT-EEEEEEES-GGG-SSHHHHHHHHHHHEEEE-EEEEEEEEEB
T ss_pred             CCCCceeEEEHHhhHHhhCCHHHHHHHHHHHcCCC-eEEEEeeccC
Confidence            122369999987763      24678899999997 9999887654

Apart from the ubiquinone/menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the ubiE gene of Escherichia coli), the ubiquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the COQ5 gene of Saccharomyces cerevisiae) and the menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the MENH gene of Bacillus subtilis), this family also includes methyltransferases involved in biotin and sterol biosynthesis and in phosphatidylethanolamine methylation.; GO: 0008168 methyltransferase activity; PDB: 1VL5_C.

>PLN02256 arogenate dehydrogenase

Probab=94.96  E-value=0.24  Score=44.25  Aligned_cols=92  Identities=17%  Similarity=0.222  Sum_probs=57.6

Q ss_pred             CCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEE
Q 018529          166 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVE  245 (354)
Q Consensus       166 ~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d  245 (354)
                      .-..+.+|.|+|.|.+|...+..++..|. .|+++++++. .+.++++|+..   +.+    ..+.+    ....|+||-
T Consensus        32 ~~~~~~kI~IIG~G~mG~slA~~L~~~G~-~V~~~d~~~~-~~~a~~~gv~~---~~~----~~e~~----~~~aDvVil   98 (304)
T PLN02256         32 EKSRKLKIGIVGFGNFGQFLAKTFVKQGH-TVLATSRSDY-SDIAAELGVSF---FRD----PDDFC----EEHPDVVLL   98 (304)
T ss_pred             ccCCCCEEEEEeeCHHHHHHHHHHHhCCC-EEEEEECccH-HHHHHHcCCee---eCC----HHHHh----hCCCCEEEE
Confidence            33455689999999999988888888887 8889988864 35666677632   111    22221    124789988


Q ss_pred             cccChHhHHHHHHH-----hhCCCceEEEEcC
Q 018529          246 CTGNIDNMISAFEC-----VHDGWGVAVLVGV  272 (354)
Q Consensus       246 ~~g~~~~~~~~~~~-----l~~~~g~~v~~g~  272 (354)
                      |+... .+...++-     ++++ ..++.++.
T Consensus        99 avp~~-~~~~vl~~l~~~~l~~~-~iviDv~S  128 (304)
T PLN02256         99 CTSIL-STEAVLRSLPLQRLKRS-TLFVDVLS  128 (304)
T ss_pred             ecCHH-HHHHHHHhhhhhccCCC-CEEEecCC
Confidence            88753 33333332     3454 55555554

>PRK12743 oxidoreductase; Provisional

Probab=94.94  E-value=0.18  Score=43.69  Aligned_cols=78  Identities=18%  Similarity=0.147  Sum_probs=47.0

Q ss_pred             CCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEc-CChhhHHH----HHhcCCce-E--EcCCCCC--hhHHHHHHHHcCC
Q 018529          170 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVD-RSSKRFEE----AKKFGVTD-F--VNTSEHD--RPIQEVIAEMTNG  238 (354)
Q Consensus       170 ~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~-~~~~~~~~----~~~lg~~~-v--~~~~~~~--~~~~~~i~~~~~~  238 (354)
                      ++++||+|+ |.+|...++.+...|+ +|+.+. ++.++.+.    +++.+... .  .|..+..  ..+.+.+.+.. +
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~   79 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGF-DIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRL-G   79 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHc-C
Confidence            468999987 9999999999999999 676654 45444333    23345322 2  2333221  11222332222 3


Q ss_pred             CccEEEEcccC
Q 018529          239 GVDRSVECTGN  249 (354)
Q Consensus       239 ~~dvv~d~~g~  249 (354)
                      ++|+++.+.|.
T Consensus        80 ~id~li~~ag~   90 (256)
T PRK12743         80 RIDVLVNNAGA   90 (256)
T ss_pred             CCCEEEECCCC
Confidence            68999998874

>PF13659 Methyltransf_26: Methyltransferase domain; PDB: 3GJY_A 3LPM_B 2NP6_D 1AQI_B 2ADM_B 2IH2_A 2JG3_A 2IBS_D 2NP7_A 2IBT_A

Probab=94.91  E-value=0.089  Score=39.39  Aligned_cols=95  Identities=23%  Similarity=0.287  Sum_probs=57.3

Q ss_pred             CCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCc-eEEcCCCCChhHHHHHHHHcCCCccEEE
Q 018529          170 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT-DFVNTSEHDRPIQEVIAEMTNGGVDRSV  244 (354)
Q Consensus       170 ~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~-~v~~~~~~~~~~~~~i~~~~~~~~dvv~  244 (354)
                      |.+||-.|+|. |...+.+++.. ..++++++.+++..+.++.    .+.+ ++- ....  ++.+....+..+.+|+|+
T Consensus         1 g~~vlD~~~G~-G~~~~~~~~~~-~~~~~gvdi~~~~~~~a~~~~~~~~~~~~~~-~~~~--D~~~~~~~~~~~~~D~Iv   75 (117)
T PF13659_consen    1 GDRVLDPGCGS-GTFLLAALRRG-AARVTGVDIDPEAVELARRNLPRNGLDDRVE-VIVG--DARDLPEPLPDGKFDLIV   75 (117)
T ss_dssp             TEEEEEETSTT-CHHHHHHHHHC-TCEEEEEESSHHHHHHHHHHCHHCTTTTTEE-EEES--HHHHHHHTCTTT-EEEEE
T ss_pred             CCEEEEcCcch-HHHHHHHHHHC-CCeEEEEEECHHHHHHHHHHHHHccCCceEE-EEEC--chhhchhhccCceeEEEE
Confidence            46777776642 44555555554 3499999999999888765    3331 111 1111  244444344445899998


Q ss_pred             EcccC--------------hHhHHHHHHHhhCCCceEEEE
Q 018529          245 ECTGN--------------IDNMISAFECVHDGWGVAVLV  270 (354)
Q Consensus       245 d~~g~--------------~~~~~~~~~~l~~~~g~~v~~  270 (354)
                      -...-              ...++.+.+.|+++ |.++++
T Consensus        76 ~npP~~~~~~~~~~~~~~~~~~~~~~~~~L~~g-G~~~~~  114 (117)
T PF13659_consen   76 TNPPYGPRSGDKAALRRLYSRFLEAAARLLKPG-GVLVFI  114 (117)
T ss_dssp             E--STTSBTT----GGCHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             ECCCCccccccchhhHHHHHHHHHHHHHHcCCC-eEEEEE
Confidence            64321              14578899999997 988765

...

>PRK12814 putative NADPH-dependent glutamate synthase small subunit; Provisional

Probab=94.88  E-value=0.15  Score=50.84  Aligned_cols=78  Identities=22%  Similarity=0.213  Sum_probs=52.9

Q ss_pred             CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChh---------------------hHHHHHhcCCceEEcCCCCCh
Q 018529          168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK---------------------RFEEAKKFGVTDFVNTSEHDR  226 (354)
Q Consensus       168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~---------------------~~~~~~~lg~~~v~~~~~~~~  226 (354)
                      +.+++|+|+|+|+.|+.++..+...|. +|++++..+.                     ..+.++++|++..++..-...
T Consensus       191 ~~~k~VaIIGaGpAGl~aA~~La~~G~-~Vtv~e~~~~~GG~l~~gip~~~~~~~~~~~~~~~l~~~Gv~i~~~~~v~~d  269 (652)
T PRK12814        191 KSGKKVAIIGAGPAGLTAAYYLLRKGH-DVTIFDANEQAGGMMRYGIPRFRLPESVIDADIAPLRAMGAEFRFNTVFGRD  269 (652)
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCC-cEEEEecCCCCCceeeecCCCCCCCHHHHHHHHHHHHHcCCEEEeCCcccCc
Confidence            457899999999999999999999998 8888876543                     144556778765544321110


Q ss_pred             hHHHHHHHHcCCCccEEEEcccCh
Q 018529          227 PIQEVIAEMTNGGVDRSVECTGNI  250 (354)
Q Consensus       227 ~~~~~i~~~~~~~~dvv~d~~g~~  250 (354)
                      -..+.+.    ..+|.||-++|..
T Consensus       270 v~~~~~~----~~~DaVilAtGa~  289 (652)
T PRK12814        270 ITLEELQ----KEFDAVLLAVGAQ  289 (652)
T ss_pred             cCHHHHH----hhcCEEEEEcCCC
Confidence            0111221    1489999998864

>PRK06522 2-dehydropantoate 2-reductase; Reviewed

Probab=94.88  E-value=0.2  Score=44.61  Aligned_cols=95  Identities=17%  Similarity=0.198  Sum_probs=57.3

Q ss_pred             eEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCCh--hHHHHHHHHcCCCccEEEEcccC
Q 018529          172 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDR--PIQEVIAEMTNGGVDRSVECTGN  249 (354)
Q Consensus       172 ~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~--~~~~~i~~~~~~~~dvv~d~~g~  249 (354)
                      +|+|+|+|.+|.+.+..+...|. .|+.+++++++.+.+++.|...  ...+...  .........  +.+|+||-++..
T Consensus         2 ~I~IiG~G~~G~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~--~~~d~vila~k~   76 (304)
T PRK06522          2 KIAILGAGAIGGLFGAALAQAGH-DVTLVARRGAHLDALNENGLRL--EDGEITVPVLAADDPAEL--GPQDLVILAVKA   76 (304)
T ss_pred             EEEEECCCHHHHHHHHHHHhCCC-eEEEEECChHHHHHHHHcCCcc--cCCceeecccCCCChhHc--CCCCEEEEeccc
Confidence            58899999999988887777887 8999988888877777656421  0000000  000011111  368999999876


Q ss_pred             hHhHHHHHHHh----hCCCceEEEEcCC
Q 018529          250 IDNMISAFECV----HDGWGVAVLVGVP  273 (354)
Q Consensus       250 ~~~~~~~~~~l----~~~~g~~v~~g~~  273 (354)
                      . .+..+++.+    .++ ..++.+...
T Consensus        77 ~-~~~~~~~~l~~~l~~~-~~iv~~~nG  102 (304)
T PRK06522         77 Y-QLPAALPSLAPLLGPD-TPVLFLQNG  102 (304)
T ss_pred             c-cHHHHHHHHhhhcCCC-CEEEEecCC
Confidence            3 334444433    343 456655443

>PLN02490 MPBQ/MSBQ methyltransferase

Probab=94.87  E-value=0.21  Score=45.12  Aligned_cols=98  Identities=21%  Similarity=0.310  Sum_probs=63.1

Q ss_pred             CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCC-ceEEcCCCCChhHHHHHHHHcCCCccEEEEc
Q 018529          168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV-TDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  246 (354)
Q Consensus       168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~-~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~  246 (354)
                      +++.+||=+|+|. |..+..+++..+...|+++|.+++-.+.+++... ..+ .....+  ..+ + .+..+.||+|+.+
T Consensus       112 ~~~~~VLDLGcGt-G~~~l~La~~~~~~~VtgVD~S~~mL~~A~~k~~~~~i-~~i~gD--~e~-l-p~~~~sFDvVIs~  185 (340)
T PLN02490        112 DRNLKVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKEC-KIIEGD--AED-L-PFPTDYADRYVSA  185 (340)
T ss_pred             CCCCEEEEEecCC-cHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhhhccCC-eEEecc--HHh-C-CCCCCceeEEEEc
Confidence            4678898899876 7777788887754589999999988777766321 111 111111  111 0 1122369998864


Q ss_pred             cc------ChHhHHHHHHHhhCCCceEEEEcC
Q 018529          247 TG------NIDNMISAFECVHDGWGVAVLVGV  272 (354)
Q Consensus       247 ~g------~~~~~~~~~~~l~~~~g~~v~~g~  272 (354)
                      ..      ....++.+.+.|+++ |++++.+.
T Consensus       186 ~~L~~~~d~~~~L~e~~rvLkPG-G~LvIi~~  216 (340)
T PLN02490        186 GSIEYWPDPQRGIKEAYRVLKIG-GKACLIGP  216 (340)
T ss_pred             ChhhhCCCHHHHHHHHHHhcCCC-cEEEEEEe
Confidence            31      124678899999997 99987753

>PRK13255 thiopurine S-methyltransferase; Reviewed

Probab=94.86  E-value=0.37  Score=40.76  Aligned_cols=100  Identities=19%  Similarity=0.136  Sum_probs=60.6

Q ss_pred             CCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-HhcCCceEEc-------CCCCC-----hhHHHHH
Q 018529          166 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTDFVN-------TSEHD-----RPIQEVI  232 (354)
Q Consensus       166 ~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~~lg~~~v~~-------~~~~~-----~~~~~~i  232 (354)
                      .+.++.+||+.|||. |.-++.+|. .|. .|++++.++...+.+ ++.+......       +...+     .++.+. 
T Consensus        34 ~~~~~~rvL~~gCG~-G~da~~LA~-~G~-~V~avD~s~~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~D~~~l-  109 (218)
T PRK13255         34 ALPAGSRVLVPLCGK-SLDMLWLAE-QGH-EVLGVELSELAVEQFFAENGLTPQTRQSGEFEHYQAGEITIYCGDFFAL-  109 (218)
T ss_pred             CCCCCCeEEEeCCCC-hHhHHHHHh-CCC-eEEEEccCHHHHHHHHHHcCCCccccccccccccccCceEEEECcccCC-
Confidence            456778999999874 777777775 698 999999999988865 3333221000       00000     001100 


Q ss_pred             HHHcCCCccEEEEccc--------ChHhHHHHHHHhhCCCceEEEE
Q 018529          233 AEMTNGGVDRSVECTG--------NIDNMISAFECVHDGWGVAVLV  270 (354)
Q Consensus       233 ~~~~~~~~dvv~d~~g--------~~~~~~~~~~~l~~~~g~~v~~  270 (354)
                      .....+.||.|+|.+-        ....+..+.+.|+++ |++.++
T Consensus       110 ~~~~~~~fd~v~D~~~~~~l~~~~R~~~~~~l~~lL~pg-G~~~l~  154 (218)
T PRK13255        110 TAADLADVDAVYDRAALIALPEEMRERYVQQLAALLPAG-CRGLLV  154 (218)
T ss_pred             CcccCCCeeEEEehHhHhhCCHHHHHHHHHHHHHHcCCC-CeEEEE
Confidence            0001136899998653        124578888999997 875543

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.86  E-value=0.28  Score=43.36  Aligned_cols=95  Identities=22%  Similarity=0.231  Sum_probs=66.4

Q ss_pred             hcccchhhhhhhhhhhcCC-CCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCCh
Q 018529          149 ILSCGVSTGLGATLNVAKP-ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDR  226 (354)
Q Consensus       149 ~l~~~~~~a~~~l~~~~~~-~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~  226 (354)
                      .+||+....+.. ++..++ -.|++|.|+|. +.+|.-.+.++...|+ .|++..+...                   + 
T Consensus       138 ~~PcTp~aii~l-L~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~ga-tVtv~~~~t~-------------------~-  195 (301)
T PRK14194        138 LTPCTPSGCLRL-LEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAHC-SVTVVHSRST-------------------D-  195 (301)
T ss_pred             CCCCcHHHHHHH-HHHhCCCCCCCEEEEECCCCccHHHHHHHHHHCCC-EEEEECCCCC-------------------C-
Confidence            456554444433 444444 46999999997 5999999999999999 8888854432                   1 


Q ss_pred             hHHHHHHHHcCCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCC
Q 018529          227 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS  274 (354)
Q Consensus       227 ~~~~~i~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~  274 (354)
                       ..+..+     ..|+|+-++|.+..+...+  ++++ ..++.+|...
T Consensus       196 -l~e~~~-----~ADIVIsavg~~~~v~~~~--ik~G-aiVIDvgin~  234 (301)
T PRK14194        196 -AKALCR-----QADIVVAAVGRPRLIDADW--LKPG-AVVIDVGINR  234 (301)
T ss_pred             -HHHHHh-----cCCEEEEecCChhcccHhh--ccCC-cEEEEecccc
Confidence             222222     3799999999987777655  8886 8888887543

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=94.85  E-value=0.11  Score=45.24  Aligned_cols=76  Identities=21%  Similarity=0.258  Sum_probs=47.9

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCce-EEcCCCCChhHHHHHHHHc--CCCccEEE
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD-FVNTSEHDRPIQEVIAEMT--NGGVDRSV  244 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~-v~~~~~~~~~~~~~i~~~~--~~~~dvv~  244 (354)
                      .++++||+|+ |.+|.+.++.+...|+ +|+.++++.++.+.   ..... ..|..+. ..+.+.+.+..  .+++|+++
T Consensus         8 ~~k~vlItG~s~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~---~~~~~~~~D~~~~-~~~~~~~~~~~~~~g~id~li   82 (266)
T PRK06171          8 QGKIIIVTGGSSGIGLAIVKELLANGA-NVVNADIHGGDGQH---ENYQFVPTDVSSA-EEVNHTVAEIIEKFGRIDGLV   82 (266)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCcccccc---CceEEEEccCCCH-HHHHHHHHHHHHHcCCCCEEE
Confidence            4678999987 9999999999888999 88888777654321   11111 1233322 12333333322  13789999


Q ss_pred             EcccC
Q 018529          245 ECTGN  249 (354)
Q Consensus       245 d~~g~  249 (354)
                      .++|.
T Consensus        83 ~~Ag~   87 (266)
T PRK06171         83 NNAGI   87 (266)
T ss_pred             ECCcc
Confidence            98873

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=94.81  E-value=0.19  Score=45.20  Aligned_cols=38  Identities=18%  Similarity=0.123  Sum_probs=31.1

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhH
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRF  207 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~  207 (354)
                      .|.+|||+|+ |.+|...+..+...|. +|+++.++.++.
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~   42 (322)
T PLN02986          4 GGKLVCVTGASGYIASWIVKLLLLRGY-TVKATVRDLTDR   42 (322)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCCcch
Confidence            4679999987 9999999988888898 788777766543

>PLN02336 phosphoethanolamine N-methyltransferase

Probab=94.81  E-value=0.19  Score=48.07  Aligned_cols=103  Identities=17%  Similarity=0.135  Sum_probs=66.2

Q ss_pred             hhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhc--CCceEEcCCCCChhHHHHHHHHcCCCc
Q 018529          163 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF--GVTDFVNTSEHDRPIQEVIAEMTNGGV  240 (354)
Q Consensus       163 ~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~l--g~~~v~~~~~~~~~~~~~i~~~~~~~~  240 (354)
                      +...++++++||=+|+|. |..++.+++..|. +|++++.+++..+.+++.  +...-+.+...+  +.+  ..+..+.|
T Consensus       260 ~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~gvDiS~~~l~~A~~~~~~~~~~v~~~~~d--~~~--~~~~~~~f  333 (475)
T PLN02336        260 DKLDLKPGQKVLDVGCGI-GGGDFYMAENFDV-HVVGIDLSVNMISFALERAIGRKCSVEFEVAD--CTK--KTYPDNSF  333 (475)
T ss_pred             HhcCCCCCCEEEEEeccC-CHHHHHHHHhcCC-EEEEEECCHHHHHHHHHHhhcCCCceEEEEcC--ccc--CCCCCCCE
Confidence            344567889999999875 6677788888888 999999999888877542  221101111111  100  00112369


Q ss_pred             cEEEEccc------ChHhHHHHHHHhhCCCceEEEEcC
Q 018529          241 DRSVECTG------NIDNMISAFECVHDGWGVAVLVGV  272 (354)
Q Consensus       241 dvv~d~~g------~~~~~~~~~~~l~~~~g~~v~~g~  272 (354)
                      |+|+....      ....+..+.+.|+++ |++++...
T Consensus       334 D~I~s~~~l~h~~d~~~~l~~~~r~Lkpg-G~l~i~~~  370 (475)
T PLN02336        334 DVIYSRDTILHIQDKPALFRSFFKWLKPG-GKVLISDY  370 (475)
T ss_pred             EEEEECCcccccCCHHHHHHHHHHHcCCC-eEEEEEEe
Confidence            99987421      135678899999997 99887643

>PRK12779 putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; Provisional

Probab=94.80  E-value=0.1  Score=53.97  Aligned_cols=78  Identities=19%  Similarity=0.175  Sum_probs=53.4

Q ss_pred             CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCCh---------------------hhHHHHHhcCCceEEcCCCCCh
Q 018529          168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS---------------------KRFEEAKKFGVTDFVNTSEHDR  226 (354)
Q Consensus       168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~---------------------~~~~~~~~lg~~~v~~~~~~~~  226 (354)
                      ..|++|+|+|+|+.|++|+..+...|. .|++.++.+                     ...+.++++|+....+..-...
T Consensus       304 ~~gkkVaVIGsGPAGLsaA~~Lar~G~-~VtVfE~~~~~GG~l~yGIP~~rlp~~vi~~~i~~l~~~Gv~f~~n~~vG~d  382 (944)
T PRK12779        304 AVKPPIAVVGSGPSGLINAYLLAVEGF-PVTVFEAFHDLGGVLRYGIPEFRLPNQLIDDVVEKIKLLGGRFVKNFVVGKT  382 (944)
T ss_pred             CCCCeEEEECCCHHHHHHHHHHHHCCC-eEEEEeeCCCCCceEEccCCCCcChHHHHHHHHHHHHhhcCeEEEeEEeccE
Confidence            458999999999999999999999999 888887643                     2345567788765444322111


Q ss_pred             hHHHHHHHHcCCCccEEEEcccC
Q 018529          227 PIQEVIAEMTNGGVDRSVECTGN  249 (354)
Q Consensus       227 ~~~~~i~~~~~~~~dvv~d~~g~  249 (354)
                       +  .+.++...++|.||-++|.
T Consensus       383 -i--t~~~l~~~~yDAV~LAtGA  402 (944)
T PRK12779        383 -A--TLEDLKAAGFWKIFVGTGA  402 (944)
T ss_pred             -E--eHHHhccccCCEEEEeCCC
Confidence             1  1222222368999999886

>PRK11188 rrmJ 23S rRNA methyltransferase J; Provisional

Probab=94.80  E-value=0.54  Score=39.50  Aligned_cols=97  Identities=20%  Similarity=0.220  Sum_probs=58.2

Q ss_pred             CCCCCeEEEEcCChhHHHHHHHHHHcCC-cEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHc-CCCccEEE
Q 018529          167 PERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMT-NGGVDRSV  244 (354)
Q Consensus       167 ~~~~~~vlI~G~g~~G~~a~~~a~~~g~-~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~-~~~~dvv~  244 (354)
                      ++++++||=+|+|+ |..+..+++..+. ..|++++.++..    ..-++ .++..+-.+....+.+.+.. .+.+|+|+
T Consensus        49 ~~~~~~VLDlG~Gt-G~~t~~l~~~~~~~~~V~aVDi~~~~----~~~~v-~~i~~D~~~~~~~~~i~~~~~~~~~D~V~  122 (209)
T PRK11188         49 FKPGMTVVDLGAAP-GGWSQYAVTQIGDKGRVIACDILPMD----PIVGV-DFLQGDFRDELVLKALLERVGDSKVQVVM  122 (209)
T ss_pred             CCCCCEEEEEcccC-CHHHHHHHHHcCCCceEEEEeccccc----CCCCc-EEEecCCCChHHHHHHHHHhCCCCCCEEe
Confidence            58888888888865 5566666676653 389999987621    11122 22322222222333443433 34899999


Q ss_pred             Ecc-----cC------------hHhHHHHHHHhhCCCceEEEE
Q 018529          245 ECT-----GN------------IDNMISAFECVHDGWGVAVLV  270 (354)
Q Consensus       245 d~~-----g~------------~~~~~~~~~~l~~~~g~~v~~  270 (354)
                      ...     |.            ...++.+.+.|+++ |++++.
T Consensus       123 S~~~~~~~g~~~~d~~~~~~~~~~~L~~~~~~LkpG-G~~vi~  164 (209)
T PRK11188        123 SDMAPNMSGTPAVDIPRAMYLVELALDMCRDVLAPG-GSFVVK  164 (209)
T ss_pred             cCCCCccCCChHHHHHHHHHHHHHHHHHHHHHcCCC-CEEEEE
Confidence            643     22            13567788899997 998874

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=94.78  E-value=0.13  Score=45.47  Aligned_cols=44  Identities=25%  Similarity=0.268  Sum_probs=37.7

Q ss_pred             CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH
Q 018529          168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK  211 (354)
Q Consensus       168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~  211 (354)
                      ..+++++|+|+|+.+.+++..+...|+.+++++.|+.+|.+.+.
T Consensus       125 ~~~k~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La  168 (283)
T PRK14027        125 AKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALA  168 (283)
T ss_pred             cCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHH
Confidence            34788999999999999888888899889999999988877654

>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional

Probab=94.77  E-value=0.44  Score=44.63  Aligned_cols=73  Identities=23%  Similarity=0.367  Sum_probs=50.6

Q ss_pred             CeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHH---------cC-CCc
Q 018529          171 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEM---------TN-GGV  240 (354)
Q Consensus       171 ~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~---------~~-~~~  240 (354)
                      .+|.|+|.|.+|...+..+...|. .|+++++++++.+.++. |...+   .+..  +.+.+++.         +. ...
T Consensus         4 ~kI~VIGlG~~G~~~A~~La~~G~-~V~~~D~~~~~v~~l~~-g~~~~---~e~~--l~~~l~~~~~~g~l~~~~~~~~a   76 (415)
T PRK11064          4 ETISVIGLGYIGLPTAAAFASRQK-QVIGVDINQHAVDTINR-GEIHI---VEPD--LDMVVKTAVEGGYLRATTTPEPA   76 (415)
T ss_pred             cEEEEECcchhhHHHHHHHHhCCC-EEEEEeCCHHHHHHHHC-CCCCc---CCCC--HHHHHHHHhhcCceeeecccccC
Confidence            468999999999988888888898 99999999999987653 33211   1221  33333221         11 158


Q ss_pred             cEEEEcccCh
Q 018529          241 DRSVECTGNI  250 (354)
Q Consensus       241 dvv~d~~g~~  250 (354)
                      |+||-|++.+
T Consensus        77 Dvvii~vptp   86 (415)
T PRK11064         77 DAFLIAVPTP   86 (415)
T ss_pred             CEEEEEcCCC
Confidence            9999999875

>PRK11559 garR tartronate semialdehyde reductase; Provisional

Probab=94.76  E-value=0.37  Score=42.87  Aligned_cols=70  Identities=21%  Similarity=0.257  Sum_probs=48.9

Q ss_pred             eEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcccChH
Q 018529          172 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNID  251 (354)
Q Consensus       172 ~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~~~  251 (354)
                      +|.|+|.|.+|...+..+...|. .|++.++++++.+.+.+.|....   .+    ..+.+.     ..|+||.++....
T Consensus         4 ~IgviG~G~mG~~~a~~l~~~g~-~v~~~d~~~~~~~~~~~~g~~~~---~~----~~e~~~-----~~d~vi~~vp~~~   70 (296)
T PRK11559          4 KVGFIGLGIMGKPMSKNLLKAGY-SLVVYDRNPEAVAEVIAAGAETA---ST----AKAVAE-----QCDVIITMLPNSP   70 (296)
T ss_pred             eEEEEccCHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCeec---CC----HHHHHh-----cCCEEEEeCCCHH
Confidence            68899999999987777777887 88999999998888777765311   11    222221     3688888877544


Q ss_pred             hHH
Q 018529          252 NMI  254 (354)
Q Consensus       252 ~~~  254 (354)
                      ..+
T Consensus        71 ~~~   73 (296)
T PRK11559         71 HVK   73 (296)
T ss_pred             HHH
Confidence            433

>PRK07417 arogenate dehydrogenase; Reviewed

Probab=94.76  E-value=0.22  Score=43.89  Aligned_cols=67  Identities=22%  Similarity=0.323  Sum_probs=48.5

Q ss_pred             eEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcccCh
Q 018529          172 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI  250 (354)
Q Consensus       172 ~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~~  250 (354)
                      +|.|+|.|.+|...+..++..|. .|+++++++++.+.+.+.|....   ...+  . +.+     ..+|+||.|+...
T Consensus         2 ~I~IIG~G~mG~sla~~L~~~g~-~V~~~d~~~~~~~~a~~~g~~~~---~~~~--~-~~~-----~~aDlVilavp~~   68 (279)
T PRK07417          2 KIGIVGLGLIGGSLGLDLRSLGH-TVYGVSRRESTCERAIERGLVDE---ASTD--L-SLL-----KDCDLVILALPIG   68 (279)
T ss_pred             eEEEEeecHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCCccc---ccCC--H-hHh-----cCCCEEEEcCCHH
Confidence            58899999999988888777887 89999999999888888774211   1111  1 111     2579999998763

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=94.74  E-value=0.26  Score=45.25  Aligned_cols=35  Identities=29%  Similarity=0.427  Sum_probs=31.2

Q ss_pred             CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCC
Q 018529          169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS  203 (354)
Q Consensus       169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~  203 (354)
                      ...+|+|+|+|++|..+++.+...|.++++.+|.+
T Consensus        40 ~~~~VliiG~GglG~~v~~~La~~Gvg~i~ivD~D   74 (370)
T PRK05600         40 HNARVLVIGAGGLGCPAMQSLASAGVGTITLIDDD   74 (370)
T ss_pred             cCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            35689999999999999999999999899999865

>PRK13984 putative oxidoreductase; Provisional

Probab=94.73  E-value=0.16  Score=50.15  Aligned_cols=78  Identities=24%  Similarity=0.208  Sum_probs=53.8

Q ss_pred             CCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCCh---------------------hhHHHHHhcCCceEEcCCCCC
Q 018529          167 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS---------------------KRFEEAKKFGVTDFVNTSEHD  225 (354)
Q Consensus       167 ~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~---------------------~~~~~~~~lg~~~v~~~~~~~  225 (354)
                      .+++++|+|+|+|+.|+.++..++..|. +|+++++.+                     ...++++++|++..++..-..
T Consensus       280 ~~~~~~v~IIGaG~aGl~aA~~L~~~G~-~v~vie~~~~~gG~~~~~i~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~  358 (604)
T PRK13984        280 EKKNKKVAIVGSGPAGLSAAYFLATMGY-EVTVYESLSKPGGVMRYGIPSYRLPDEALDKDIAFIEALGVKIHLNTRVGK  358 (604)
T ss_pred             ccCCCeEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCceEeecCCcccCCHHHHHHHHHHHHHCCcEEECCCEeCC
Confidence            5678999999999999999999999998 788886543                     124566778876554432111


Q ss_pred             hhHHHHHHHHcCCCccEEEEcccC
Q 018529          226 RPIQEVIAEMTNGGVDRSVECTGN  249 (354)
Q Consensus       226 ~~~~~~i~~~~~~~~dvv~d~~g~  249 (354)
                      ....+.++    ..+|.||.++|.
T Consensus       359 ~~~~~~~~----~~yD~vilAtGa  378 (604)
T PRK13984        359 DIPLEELR----EKHDAVFLSTGF  378 (604)
T ss_pred             cCCHHHHH----hcCCEEEEEcCc
Confidence            00112221    269999999985

>PRK13403 ketol-acid reductoisomerase; Provisional

Probab=94.72  E-value=0.41  Score=42.71  Aligned_cols=88  Identities=25%  Similarity=0.324  Sum_probs=59.8

Q ss_pred             CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcc
Q 018529          168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  247 (354)
Q Consensus       168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~  247 (354)
                      -.|++|.|+|-|.+|...++.++.+|. +|++..+.....+.+...|+. +.     +  +.+.++     ..|+|+-++
T Consensus        14 LkgKtVGIIG~GsIG~amA~nL~d~G~-~ViV~~r~~~s~~~A~~~G~~-v~-----s--l~Eaak-----~ADVV~llL   79 (335)
T PRK13403         14 LQGKTVAVIGYGSQGHAQAQNLRDSGV-EVVVGVRPGKSFEVAKADGFE-VM-----S--VSEAVR-----TAQVVQMLL   79 (335)
T ss_pred             hCcCEEEEEeEcHHHHHHHHHHHHCcC-EEEEEECcchhhHHHHHcCCE-EC-----C--HHHHHh-----cCCEEEEeC
Confidence            468899999999999999999999999 787776665566666667763 21     1  333332     379999988


Q ss_pred             cChHh---H-HHHHHHhhCCCceEEEEc
Q 018529          248 GNIDN---M-ISAFECVHDGWGVAVLVG  271 (354)
Q Consensus       248 g~~~~---~-~~~~~~l~~~~g~~v~~g  271 (354)
                      +.+..   + ...+..|+++  .++.++
T Consensus        80 Pd~~t~~V~~~eil~~MK~G--aiL~f~  105 (335)
T PRK13403         80 PDEQQAHVYKAEVEENLREG--QMLLFS  105 (335)
T ss_pred             CChHHHHHHHHHHHhcCCCC--CEEEEC
Confidence            75332   2 2345566664  444444

>PRK00216 ubiE ubiquinone/menaquinone biosynthesis methyltransferase; Reviewed

Probab=94.72  E-value=0.18  Score=43.05  Aligned_cols=105  Identities=16%  Similarity=0.209  Sum_probs=66.5

Q ss_pred             hhcCCCCCCeEEEEcCChhHHHHHHHHHHcC-CcEEEEEcCChhhHHHHHhcCC----ceEEcCCCCChhHHHHHHHHcC
Q 018529          163 NVAKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKKFGV----TDFVNTSEHDRPIQEVIAEMTN  237 (354)
Q Consensus       163 ~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g-~~~vi~v~~~~~~~~~~~~lg~----~~v~~~~~~~~~~~~~i~~~~~  237 (354)
                      ......++.+||-+|+|. |..+..+++..+ ..++++++.+++..+.+++.-.    ...+.....+  +.+.  ....
T Consensus        45 ~~~~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d--~~~~--~~~~  119 (239)
T PRK00216         45 KWLGVRPGDKVLDLACGT-GDLAIALAKAVGKTGEVVGLDFSEGMLAVGREKLRDLGLSGNVEFVQGD--AEAL--PFPD  119 (239)
T ss_pred             HHhCCCCCCeEEEeCCCC-CHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHhhcccccccCeEEEecc--cccC--CCCC
Confidence            334456788999999987 888888888775 2399999999988887766321    1111111111  1110  0122


Q ss_pred             CCccEEEEccc------ChHhHHHHHHHhhCCCceEEEEcCC
Q 018529          238 GGVDRSVECTG------NIDNMISAFECVHDGWGVAVLVGVP  273 (354)
Q Consensus       238 ~~~dvv~d~~g------~~~~~~~~~~~l~~~~g~~v~~g~~  273 (354)
                      +.+|+|+....      ....+..+.+.|+++ |+++++...
T Consensus       120 ~~~D~I~~~~~l~~~~~~~~~l~~~~~~L~~g-G~li~~~~~  160 (239)
T PRK00216        120 NSFDAVTIAFGLRNVPDIDKALREMYRVLKPG-GRLVILEFS  160 (239)
T ss_pred             CCccEEEEecccccCCCHHHHHHHHHHhccCC-cEEEEEEec
Confidence            36899875321      235677888999997 998887654

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=94.72  E-value=0.22  Score=40.75  Aligned_cols=39  Identities=36%  Similarity=0.422  Sum_probs=31.7

Q ss_pred             eEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH
Q 018529          172 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK  211 (354)
Q Consensus       172 ~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~  211 (354)
                      +|.|+|+|.+|...++++...|. .|+.++.+++..+..+
T Consensus         1 ~V~ViGaG~mG~~iA~~~a~~G~-~V~l~d~~~~~l~~~~   39 (180)
T PF02737_consen    1 KVAVIGAGTMGRGIAALFARAGY-EVTLYDRSPEALERAR   39 (180)
T ss_dssp             EEEEES-SHHHHHHHHHHHHTTS-EEEEE-SSHHHHHHHH
T ss_pred             CEEEEcCCHHHHHHHHHHHhCCC-cEEEEECChHHHHhhh
Confidence            58899999999988888888899 9999999998876653

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=94.71  E-value=0.23  Score=42.76  Aligned_cols=77  Identities=19%  Similarity=0.215  Sum_probs=45.4

Q ss_pred             CCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEc-CChhhHHHH-HhcCCce-EE--cCCCCChhHHHHH---HHHcCCCc
Q 018529          170 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVD-RSSKRFEEA-KKFGVTD-FV--NTSEHDRPIQEVI---AEMTNGGV  240 (354)
Q Consensus       170 ~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~-~~~~~~~~~-~~lg~~~-v~--~~~~~~~~~~~~i---~~~~~~~~  240 (354)
                      +.++||+|+ |.+|...+..+...|+ +|+.+. +++++.+.+ .+++... .+  |..+. ..+.+.+   .+..++++
T Consensus         5 ~k~ilItGas~gIG~~la~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~g~~i   82 (253)
T PRK08642          5 EQTVLVTGGSRGLGAAIARAFAREGA-RVVVNYHQSEDAAEALADELGDRAIALQADVTDR-EQVQAMFATATEHFGKPI   82 (253)
T ss_pred             CCEEEEeCCCCcHHHHHHHHHHHCCC-eEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCH-HHHHHHHHHHHHHhCCCC
Confidence            568999987 9999999988888899 666553 445444433 3343221 12  32221 1233333   22222248


Q ss_pred             cEEEEccc
Q 018529          241 DRSVECTG  248 (354)
Q Consensus       241 dvv~d~~g  248 (354)
                      |+++.+.|
T Consensus        83 d~li~~ag   90 (253)
T PRK08642         83 TTVVNNAL   90 (253)
T ss_pred             eEEEECCC
Confidence            99999875

>PRK14982 acyl-ACP reductase; Provisional

Probab=94.71  E-value=0.17  Score=45.63  Aligned_cols=94  Identities=20%  Similarity=0.252  Sum_probs=60.2

Q ss_pred             CCCCeEEEEcC-ChhHHHHHHHHH-HcCCcEEEEEcCChhhHHHHH-hcCCceEEcCCCCChhHHHHHHHHcCCCccEEE
Q 018529          168 ERGSSVAVFGL-GAVGLAAAEGAR-IAGASRIIGVDRSSKRFEEAK-KFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSV  244 (354)
Q Consensus       168 ~~~~~vlI~G~-g~~G~~a~~~a~-~~g~~~vi~v~~~~~~~~~~~-~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~  244 (354)
                      -.+.+|+|+|+ |.+|...++.+. ..|..+++.+.++.++.+.+. +++...+.       ++.    +.. ..+|+|+
T Consensus       153 l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~i~-------~l~----~~l-~~aDiVv  220 (340)
T PRK14982        153 LSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGKIL-------SLE----EAL-PEADIVV  220 (340)
T ss_pred             cCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhccccHH-------hHH----HHH-ccCCEEE
Confidence            46789999998 899998877775 456668999999888776654 33311111       122    221 2589999


Q ss_pred             EcccChHhHHHHHHHhhCCCceEEEEcCCC
Q 018529          245 ECTGNIDNMISAFECVHDGWGVAVLVGVPS  274 (354)
Q Consensus       245 d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~  274 (354)
                      .+++.+.....-...+++. -.++.++.+.
T Consensus       221 ~~ts~~~~~~I~~~~l~~~-~~viDiAvPR  249 (340)
T PRK14982        221 WVASMPKGVEIDPETLKKP-CLMIDGGYPK  249 (340)
T ss_pred             ECCcCCcCCcCCHHHhCCC-eEEEEecCCC
Confidence            9998754432222345664 5666776654

>PRK09135 pteridine reductase; Provisional

Probab=94.70  E-value=0.26  Score=42.30  Aligned_cols=34  Identities=21%  Similarity=0.150  Sum_probs=29.0

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCC
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRS  203 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~  203 (354)
                      .+.++||+|+ |.+|...+..+...|+ +|++++++
T Consensus         5 ~~~~vlItGa~g~iG~~l~~~l~~~g~-~v~~~~r~   39 (249)
T PRK09135          5 SAKVALITGGARRIGAAIARTLHAAGY-RVAIHYHR   39 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCC
Confidence            4578999987 9999998888888899 88888775

>TIGR00091 tRNA (guanine-N(7)-)-methyltransferase

Probab=94.68  E-value=0.65  Score=38.48  Aligned_cols=98  Identities=12%  Similarity=0.156  Sum_probs=63.0

Q ss_pred             CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCceEEcCCCCChhHHHHHHHHcCC-CccEE
Q 018529          169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRS  243 (354)
Q Consensus       169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~~~~~-~~dvv  243 (354)
                      ....+|=+|+|. |..+..+|+......|++++.+++..+.+++    .+...+-. ...+  ..+........ .+|.|
T Consensus        16 ~~~~ilDiGcG~-G~~~~~la~~~p~~~v~gvD~~~~~l~~a~~~~~~~~l~ni~~-i~~d--~~~~~~~~~~~~~~d~v   91 (194)
T TIGR00091        16 KAPLHLEIGCGK-GRFLIDMAKQNPDKNFLGIEIHTPIVLAANNKANKLGLKNLHV-LCGD--ANELLDKFFPDGSLSKV   91 (194)
T ss_pred             CCceEEEeCCCc-cHHHHHHHHhCCCCCEEEEEeeHHHHHHHHHHHHHhCCCCEEE-EccC--HHHHHHhhCCCCceeEE
Confidence            344666679876 8888888887644489999999987766543    34332211 1112  33333333333 68888


Q ss_pred             EEcccC--------------hHhHHHHHHHhhCCCceEEEEc
Q 018529          244 VECTGN--------------IDNMISAFECVHDGWGVAVLVG  271 (354)
Q Consensus       244 ~d~~g~--------------~~~~~~~~~~l~~~~g~~v~~g  271 (354)
                      +-..+.              +..+..+.+.|+++ |.+.+.-
T Consensus        92 ~~~~pdpw~k~~h~~~r~~~~~~l~~~~r~Lkpg-G~l~~~t  132 (194)
T TIGR00091        92 FLNFPDPWPKKRHNKRRITQPHFLKEYANVLKKG-GVIHFKT  132 (194)
T ss_pred             EEECCCcCCCCCccccccCCHHHHHHHHHHhCCC-CEEEEEe
Confidence            765432              35788899999997 9987664

In E. coli, this protein flanks the DNA repair protein MutY, also called micA.

>PRK05650 short chain dehydrogenase; Provisional

Probab=94.67  E-value=0.21  Score=43.73  Aligned_cols=76  Identities=21%  Similarity=0.247  Sum_probs=47.5

Q ss_pred             eEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH----HhcCCce-EE--cCCCCChhHHHHHHHHc--CCCcc
Q 018529          172 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-FV--NTSEHDRPIQEVIAEMT--NGGVD  241 (354)
Q Consensus       172 ~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~----~~lg~~~-v~--~~~~~~~~~~~~i~~~~--~~~~d  241 (354)
                      ++||+|+ |.+|...+..+...|+ +|+.++++.++.+.+    +..+.+. .+  |..+. ..+.+.+....  .+++|
T Consensus         2 ~vlVtGasggIG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~-~~~~~~~~~i~~~~~~id   79 (270)
T PRK05650          2 RVMITGAASGLGRAIALRWAREGW-RLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDY-SQLTALAQACEEKWGGID   79 (270)
T ss_pred             EEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCH-HHHHHHHHHHHHHcCCCC
Confidence            6899987 9999998888888899 888888887765432    2233322 12  22221 11222222221  13799


Q ss_pred             EEEEcccC
Q 018529          242 RSVECTGN  249 (354)
Q Consensus       242 vv~d~~g~  249 (354)
                      +++.++|.
T Consensus        80 ~lI~~ag~   87 (270)
T PRK05650         80 VIVNNAGV   87 (270)
T ss_pred             EEEECCCC
Confidence            99999874

>PRK15451 tRNA cmo(5)U34 methyltransferase; Provisional

Probab=94.65  E-value=0.22  Score=43.01  Aligned_cols=98  Identities=20%  Similarity=0.223  Sum_probs=62.5

Q ss_pred             CCCCCeEEEEcCChhHHHHHHHHHHc---CCcEEEEEcCChhhHHHHHhc----CCceEEcCCCCChhHHHHHHHHcCCC
Q 018529          167 PERGSSVAVFGLGAVGLAAAEGARIA---GASRIIGVDRSSKRFEEAKKF----GVTDFVNTSEHDRPIQEVIAEMTNGG  239 (354)
Q Consensus       167 ~~~~~~vlI~G~g~~G~~a~~~a~~~---g~~~vi~v~~~~~~~~~~~~l----g~~~v~~~~~~~~~~~~~i~~~~~~~  239 (354)
                      +.++.+||-+|+|. |..+..+++..   +. ++++++.+++-.+.+++.    +...-+.....+  +    .++..+.
T Consensus        54 ~~~~~~vLDlGcGt-G~~~~~l~~~~~~~~~-~v~gvD~S~~ml~~A~~~~~~~~~~~~v~~~~~d--~----~~~~~~~  125 (247)
T PRK15451         54 VQPGTQVYDLGCSL-GAATLSVRRNIHHDNC-KIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGD--I----RDIAIEN  125 (247)
T ss_pred             CCCCCEEEEEcccC-CHHHHHHHHhcCCCCC-eEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEeCC--h----hhCCCCC
Confidence            56888999999874 66677777743   45 999999999888877552    321111111111  1    1122235


Q ss_pred             ccEEEEccc-----C---hHhHHHHHHHhhCCCceEEEEcCC
Q 018529          240 VDRSVECTG-----N---IDNMISAFECVHDGWGVAVLVGVP  273 (354)
Q Consensus       240 ~dvv~d~~g-----~---~~~~~~~~~~l~~~~g~~v~~g~~  273 (354)
                      +|+|+....     .   ...+..+.+.|+++ |.+++....
T Consensus       126 ~D~vv~~~~l~~l~~~~~~~~l~~i~~~LkpG-G~l~l~e~~  166 (247)
T PRK15451        126 ASMVVLNFTLQFLEPSERQALLDKIYQGLNPG-GALVLSEKF  166 (247)
T ss_pred             CCEEehhhHHHhCCHHHHHHHHHHHHHhcCCC-CEEEEEEec
Confidence            787775321     1   24688899999997 999887643

>TIGR00446 nop2p NOL1/NOP2/sun family putative RNA methylase

Probab=94.64  E-value=0.98  Score=39.48  Aligned_cols=101  Identities=20%  Similarity=0.245  Sum_probs=63.3

Q ss_pred             hcCCCCCCeEEEEcCChhHHHHHHHHHHcC-CcEEEEEcCChhhHHHHH----hcCCceEEcCCCCChhHHHHHHHHcCC
Q 018529          164 VAKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAK----KFGVTDFVNTSEHDRPIQEVIAEMTNG  238 (354)
Q Consensus       164 ~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g-~~~vi~v~~~~~~~~~~~----~lg~~~v~~~~~~~~~~~~~i~~~~~~  238 (354)
                      ...+++|++||=.|+|+ |..++.++..++ ...|++++.++++.+.++    ++|...+..... +  ... +... .+
T Consensus        66 ~l~~~~g~~VLDl~ag~-G~kt~~la~~~~~~g~v~a~D~~~~~l~~~~~n~~~~g~~~v~~~~~-D--~~~-~~~~-~~  139 (264)
T TIGR00446        66 ALEPDPPERVLDMAAAP-GGKTTQISALMKNEGAIVANEFSKSRTKVLIANINRCGVLNVAVTNF-D--GRV-FGAA-VP  139 (264)
T ss_pred             HhCCCCcCEEEEECCCc-hHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEecC-C--HHH-hhhh-cc
Confidence            34678999988887764 555556666553 238999999999987764    467654322222 1  111 1111 23


Q ss_pred             CccEEEE---cccC-------------------------hHhHHHHHHHhhCCCceEEEEc
Q 018529          239 GVDRSVE---CTGN-------------------------IDNMISAFECVHDGWGVAVLVG  271 (354)
Q Consensus       239 ~~dvv~d---~~g~-------------------------~~~~~~~~~~l~~~~g~~v~~g  271 (354)
                      .||.|+-   |.|.                         .+.+..+++.++++ |+++...
T Consensus       140 ~fD~Vl~D~Pcsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~iL~~a~~~lkpg-G~lvYst  199 (264)
T TIGR00446       140 KFDAILLDAPCSGEGVIRKDPSRKKNWSEEDIQEISALQKELIDSAFDALKPG-GVLVYST  199 (264)
T ss_pred             CCCEEEEcCCCCCCcccccChhhhhcCCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEEe
Confidence            6999974   3332                         13677888899997 9987554

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=94.63  E-value=0.3  Score=41.86  Aligned_cols=79  Identities=16%  Similarity=0.223  Sum_probs=46.4

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEE-cCChh-hHHHHH---hcCCceE---EcCCCCChhHHHHHHHHc--C
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGV-DRSSK-RFEEAK---KFGVTDF---VNTSEHDRPIQEVIAEMT--N  237 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v-~~~~~-~~~~~~---~lg~~~v---~~~~~~~~~~~~~i~~~~--~  237 (354)
                      +++++||+|+ |.+|...++.+...|+ +|+.. .++.+ +.+.+.   +.+....   .|..+. .++.+.+.+..  .
T Consensus         2 ~~k~~lVtG~s~giG~~~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~   79 (246)
T PRK12938          2 SQRIAYVTGGMGGIGTSICQRLHKDGF-KVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDW-DSTKAAFDKVKAEV   79 (246)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCH-HHHHHHHHHHHHHh
Confidence            3578899987 9999999999999999 66654 33333 222332   3354322   222221 12222222221  1


Q ss_pred             CCccEEEEcccC
Q 018529          238 GGVDRSVECTGN  249 (354)
Q Consensus       238 ~~~dvv~d~~g~  249 (354)
                      ++.|++++++|.
T Consensus        80 ~~id~li~~ag~   91 (246)
T PRK12938         80 GEIDVLVNNAGI   91 (246)
T ss_pred             CCCCEEEECCCC
Confidence            479999999875

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=94.63  E-value=0.22  Score=42.61  Aligned_cols=78  Identities=24%  Similarity=0.344  Sum_probs=47.1

Q ss_pred             CCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEE-cCChhhHHHHH----hcCCce-EE--cCCCCChhHHHHHHHHcC--C
Q 018529          170 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGV-DRSSKRFEEAK----KFGVTD-FV--NTSEHDRPIQEVIAEMTN--G  238 (354)
Q Consensus       170 ~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v-~~~~~~~~~~~----~lg~~~-v~--~~~~~~~~~~~~i~~~~~--~  238 (354)
                      +.++||+|+ |.+|...+..+...|+ +|+.+ +++.++.+.+.    +.+... ++  |..+. ..+.+.+.....  +
T Consensus         5 ~~~ilI~Gasg~iG~~la~~l~~~g~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~   82 (247)
T PRK05565          5 GKVAIVTGASGGIGRAIAELLAKEGA-KVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSE-EDVENLVEQIVEKFG   82 (247)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCH-HHHHHHHHHHHHHhC
Confidence            468999987 9999998888778898 77777 88776654332    222211 22  22221 122222222211  3


Q ss_pred             CccEEEEcccC
Q 018529          239 GVDRSVECTGN  249 (354)
Q Consensus       239 ~~dvv~d~~g~  249 (354)
                      ++|+||.+.|.
T Consensus        83 ~id~vi~~ag~   93 (247)
T PRK05565         83 KIDILVNNAGI   93 (247)
T ss_pred             CCCEEEECCCc
Confidence            69999998874

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=94.62  E-value=0.3  Score=46.35  Aligned_cols=86  Identities=17%  Similarity=0.276  Sum_probs=0.0

Q ss_pred             eEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh-cCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcccCh
Q 018529          172 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI  250 (354)
Q Consensus       172 ~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~-lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~~  250 (354)
                      +|+|.|+|.+|...++.+...|. .|+++++++++.+.+++ .+...+.....    -.+.+.+..-+++|.|+-+++..
T Consensus         2 ~viIiG~G~ig~~~a~~L~~~g~-~v~vid~~~~~~~~~~~~~~~~~~~gd~~----~~~~l~~~~~~~a~~vi~~~~~~   76 (453)
T PRK09496          2 KIIIVGAGQVGYTLAENLSGENN-DVTVIDTDEERLRRLQDRLDVRTVVGNGS----SPDVLREAGAEDADLLIAVTDSD   76 (453)
T ss_pred             EEEEECCCHHHHHHHHHHHhCCC-cEEEEECCHHHHHHHHhhcCEEEEEeCCC----CHHHHHHcCCCcCCEEEEecCCh


Q ss_pred             HhHHHHHHHhhC
Q 018529          251 DNMISAFECVHD  262 (354)
Q Consensus       251 ~~~~~~~~~l~~  262 (354)
                      ..-..+...++.
T Consensus        77 ~~n~~~~~~~r~   88 (453)
T PRK09496         77 ETNMVACQIAKS   88 (453)
T ss_pred             HHHHHHHHHHHH

>TIGR02415 23BDH acetoin reductases

Probab=94.61  E-value=0.21  Score=43.02  Aligned_cols=77  Identities=21%  Similarity=0.237  Sum_probs=47.9

Q ss_pred             CeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH----HhcCCce-E--EcCCCCChhHHHHHHHHc--CCCc
Q 018529          171 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-F--VNTSEHDRPIQEVIAEMT--NGGV  240 (354)
Q Consensus       171 ~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~----~~lg~~~-v--~~~~~~~~~~~~~i~~~~--~~~~  240 (354)
                      ++++|+|+ |.+|...++.+...|+ +|+.+.+++++.+.+    ++.+... .  .|..+. ..+.+.+.+..  .+..
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~-~~i~~~~~~~~~~~~~i   78 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGF-AVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDK-DQVFSAIDQAAEKFGGF   78 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCH-HHHHHHHHHHHHHcCCC
Confidence            36899987 9999999988889999 888888877654432    2234321 1  222222 12223233322  1368


Q ss_pred             cEEEEcccC
Q 018529          241 DRSVECTGN  249 (354)
Q Consensus       241 dvv~d~~g~  249 (354)
                      |+++.++|.
T Consensus        79 d~vi~~ag~   87 (254)
T TIGR02415        79 DVMVNNAGV   87 (254)
T ss_pred             CEEEECCCc
Confidence            999998874

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK06436 glycerate dehydrogenase; Provisional

Probab=94.60  E-value=0.24  Score=44.13  Aligned_cols=87  Identities=17%  Similarity=0.175  Sum_probs=56.7

Q ss_pred             CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcc
Q 018529          168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  247 (354)
Q Consensus       168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~  247 (354)
                      -.|.+|.|+|.|.+|...+++++.+|. +|++.+++...      .+....  +.    ++.+.+.     ..|+|+.+.
T Consensus       120 L~gktvgIiG~G~IG~~vA~~l~afG~-~V~~~~r~~~~------~~~~~~--~~----~l~ell~-----~aDiv~~~l  181 (303)
T PRK06436        120 LYNKSLGILGYGGIGRRVALLAKAFGM-NIYAYTRSYVN------DGISSI--YM----EPEDIMK-----KSDFVLISL  181 (303)
T ss_pred             CCCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCcc------cCcccc--cC----CHHHHHh-----hCCEEEECC
Confidence            358999999999999999999999999 99999876321      122110  11    1333222     368888777


Q ss_pred             cChHh-----HHHHHHHhhCCCceEEEEcCC
Q 018529          248 GNIDN-----MISAFECVHDGWGVAVLVGVP  273 (354)
Q Consensus       248 g~~~~-----~~~~~~~l~~~~g~~v~~g~~  273 (354)
                      +..+.     -...++.++++ ..++.++..
T Consensus       182 p~t~~T~~li~~~~l~~mk~g-a~lIN~sRG  211 (303)
T PRK06436        182 PLTDETRGMINSKMLSLFRKG-LAIINVARA  211 (303)
T ss_pred             CCCchhhcCcCHHHHhcCCCC-eEEEECCCc
Confidence            64321     13456677775 777777654

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=94.60  E-value=0.31  Score=41.65  Aligned_cols=79  Identities=28%  Similarity=0.324  Sum_probs=46.2

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChh-hHH-H---HHhcCCce-EE--cCCCCChhHHHHHHHHcC--
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSK-RFE-E---AKKFGVTD-FV--NTSEHDRPIQEVIAEMTN--  237 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~-~~~-~---~~~lg~~~-v~--~~~~~~~~~~~~i~~~~~--  237 (354)
                      .+.++||+|+ |.+|...+..+...|+ +|+++.++.+ +.+ .   ++..+... .+  |..+. ..+.+.+++...  
T Consensus         4 ~~~~vlItG~sg~iG~~l~~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~   81 (248)
T PRK05557          4 EGKVALVTGASRGIGRAIAERLAAQGA-NVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDA-ESVERAVDEAKAEF   81 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCH-HHHHHHHHHHHHHc
Confidence            3568999987 9999999999998999 6756555443 222 1   22233322 22  22222 123233333221  


Q ss_pred             CCccEEEEcccC
Q 018529          238 GGVDRSVECTGN  249 (354)
Q Consensus       238 ~~~dvv~d~~g~  249 (354)
                      +++|.++.++|.
T Consensus        82 ~~id~vi~~ag~   93 (248)
T PRK05557         82 GGVDILVNNAGI   93 (248)
T ss_pred             CCCCEEEECCCc
Confidence            368999998874

>PRK10901 16S rRNA methyltransferase B; Provisional

Probab=94.59  E-value=0.52  Score=44.37  Aligned_cols=102  Identities=16%  Similarity=0.287  Sum_probs=62.9

Q ss_pred             hhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCc-eEEcCCCCChhHHHHHHHHcC
Q 018529          163 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT-DFVNTSEHDRPIQEVIAEMTN  237 (354)
Q Consensus       163 ~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~-~v~~~~~~~~~~~~~i~~~~~  237 (354)
                      ....+++|++||=+|+|+ |..+..++...+..+|++++.++++.+.+++    +|.. .++..+..+  ...   ....
T Consensus       238 ~~l~~~~g~~VLDlgaG~-G~~t~~la~~~~~~~v~a~D~s~~~l~~~~~n~~~~g~~~~~~~~D~~~--~~~---~~~~  311 (427)
T PRK10901        238 TLLAPQNGERVLDACAAP-GGKTAHILELAPQAQVVALDIDAQRLERVRENLQRLGLKATVIVGDARD--PAQ---WWDG  311 (427)
T ss_pred             HHcCCCCCCEEEEeCCCC-ChHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEcCccc--chh---hccc
Confidence            345678999998888754 4455666666542499999999998877643    5543 222211111  110   0112


Q ss_pred             CCccEEEE---cccC-------------------------hHhHHHHHHHhhCCCceEEEEc
Q 018529          238 GGVDRSVE---CTGN-------------------------IDNMISAFECVHDGWGVAVLVG  271 (354)
Q Consensus       238 ~~~dvv~d---~~g~-------------------------~~~~~~~~~~l~~~~g~~v~~g  271 (354)
                      +.||.|+-   |.|.                         ...+..+++.|+++ |+++..-
T Consensus       312 ~~fD~Vl~D~Pcs~~G~~~~~p~~~~~~~~~~l~~l~~~q~~iL~~a~~~LkpG-G~lvyst  372 (427)
T PRK10901        312 QPFDRILLDAPCSATGVIRRHPDIKWLRRPEDIAALAALQSEILDALWPLLKPG-GTLLYAT  372 (427)
T ss_pred             CCCCEEEECCCCCcccccccCccccccCCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEEe
Confidence            36999973   3321                         13577888899997 9988653

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=94.59  E-value=0.15  Score=38.91  Aligned_cols=78  Identities=24%  Similarity=0.355  Sum_probs=49.1

Q ss_pred             CeEEEEcCChhHHHHHHHHHHcCCcEEEEE-cCChhhHHHHHh-cCCceEEcCCCCChhHHHHHHHHcCCCccEEEEccc
Q 018529          171 SSVAVFGLGAVGLAAAEGARIAGASRIIGV-DRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  248 (354)
Q Consensus       171 ~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v-~~~~~~~~~~~~-lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g  248 (354)
                      -+|-|+|+|-+|......++..|. .|..+ .++.++.+++.. ++...+.+..+           .. ..+|++|-++.
T Consensus        11 l~I~iIGaGrVG~~La~aL~~ag~-~v~~v~srs~~sa~~a~~~~~~~~~~~~~~-----------~~-~~aDlv~iavp   77 (127)
T PF10727_consen   11 LKIGIIGAGRVGTALARALARAGH-EVVGVYSRSPASAERAAAFIGAGAILDLEE-----------IL-RDADLVFIAVP   77 (127)
T ss_dssp             -EEEEECTSCCCCHHHHHHHHTTS-EEEEESSCHH-HHHHHHC--TT-----TTG-----------GG-CC-SEEEE-S-
T ss_pred             cEEEEECCCHHHHHHHHHHHHCCC-eEEEEEeCCccccccccccccccccccccc-----------cc-ccCCEEEEEec
Confidence            478899999999999999999998 77777 455666666655 34333332211           11 25899999998


Q ss_pred             ChHhHHHHHHHhhC
Q 018529          249 NIDNMISAFECVHD  262 (354)
Q Consensus       249 ~~~~~~~~~~~l~~  262 (354)
                      . +.+...+..|..
T Consensus        78 D-daI~~va~~La~   90 (127)
T PF10727_consen   78 D-DAIAEVAEQLAQ   90 (127)
T ss_dssp             C-CHHHHHHHHHHC
T ss_pred             h-HHHHHHHHHHHH
Confidence            8 677777777765

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=94.58  E-value=0.49  Score=39.38  Aligned_cols=34  Identities=32%  Similarity=0.474  Sum_probs=30.0

Q ss_pred             CCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCC
Q 018529          170 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS  203 (354)
Q Consensus       170 ~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~  203 (354)
                      ..+|+|+|+|++|...+..+-..|.++++.+|.+
T Consensus        19 ~s~VlviG~gglGsevak~L~~~GVg~i~lvD~d   52 (198)
T cd01485          19 SAKVLIIGAGALGAEIAKNLVLAGIDSITIVDHR   52 (198)
T ss_pred             hCcEEEECCCHHHHHHHHHHHHcCCCEEEEEECC
Confidence            3789999999999999999999999889888754

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=94.54  E-value=0.27  Score=42.81  Aligned_cols=79  Identities=20%  Similarity=0.349  Sum_probs=47.1

Q ss_pred             CCCeEEEEcC---ChhHHHHHHHHHHcCCcEEEEEcCC---hhhHHHH-HhcCCceE--EcCCCCChhHHHHHHHHcC--
Q 018529          169 RGSSVAVFGL---GAVGLAAAEGARIAGASRIIGVDRS---SKRFEEA-KKFGVTDF--VNTSEHDRPIQEVIAEMTN--  237 (354)
Q Consensus       169 ~~~~vlI~G~---g~~G~~a~~~a~~~g~~~vi~v~~~---~~~~~~~-~~lg~~~v--~~~~~~~~~~~~~i~~~~~--  237 (354)
                      +++++||+|+   +++|.+.++.+...|+ +|+.+.+.   +++.+.+ ++++....  .|..+.+ ++.+.+.....  
T Consensus         5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~-~v~~~~~~~~~~~   82 (260)
T PRK06997          5 AGKRILITGLLSNRSIAYGIAKACKREGA-ELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDE-QIDALFASLGQHW   82 (260)
T ss_pred             CCcEEEEeCCCCCCcHHHHHHHHHHHCCC-eEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHH-HHHHHHHHHHHHh
Confidence            4688999984   5899998888888899 77776543   3333322 33443222  2333322 23333333222  


Q ss_pred             CCccEEEEcccC
Q 018529          238 GGVDRSVECTGN  249 (354)
Q Consensus       238 ~~~dvv~d~~g~  249 (354)
                      +.+|++++++|.
T Consensus        83 g~iD~lvnnAG~   94 (260)
T PRK06997         83 DGLDGLVHSIGF   94 (260)
T ss_pred             CCCcEEEEcccc
Confidence            479999998864

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	354
3uko_A	378	Crystal Structure Of S-Nitrosoglutathione Reductase		9e-93
4dl9_A	396	Crystal Structure Of S-nitrosoglutathione Reductase		1e-92
1cdo_A	374	Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Co		1e-75
3qj5_A	374	S-Nitrosoglutathione Reductase (Gsnor) In Complex W		8e-74
2fzw_A	373	Structure Of The Binary Complex Of The E67l Mutant		9e-74
1mc5_A	374	Ternary Complex Of Human Glutathione-Dependent Form		1e-73
1teh_A	373	Structure Of Human Liver Chichi Alcohol Dehydrogena		1e-73
1qv6_A	374	Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG		4e-71
1axg_A	374	Crystal Structure Of The Val203->ala Mutant Of Live		5e-71
6adh_A	374	Structure Of Triclinic Ternary Complex Of Horse Liv		6e-71
3oq6_A	374	Horse Liver Alcohol Dehydrogenase A317c Mutant Comp		8e-71
1hdx_A	374	Three-Dimensional Structures Of Three Human Alcohol		1e-70
1n8k_A	374	Horse Liver Alcohol Dehydrogenase Val292thr Mutant		2e-70
1a71_A	374	Ternary Complex Of An Active Site Double Mutant Of		2e-70
1axe_A	374	Crystal Structure Of The Active-Site Mutant Phe93->		2e-70
1ju9_A	374	Horse Liver Alcohol Dehydrogenase Val292ser Mutant		2e-70
1mgo_A	374	Horse Liver Alcohol Dehydrogenase Phe93ala Mutant L		5e-70
1hdy_A	374	Three-Dimensional Structures Of Three Human Alcohol		8e-70
1hdz_A	374	Three-Dimensional Structures Of Three Human Alcohol		1e-69
1htb_A	374	Crystallization Of Human Beta3 Alcohol Dehydrogenas		2e-69
1qlh_A	374	Horse Liver Alcohol Dehydrogenase Complexed To Nad		2e-69
1ee2_B	373	The Structure Of Steroid-Active Alcohol Dehydrogena		3e-68
1ee2_A	373	The Structure Of Steroid-Active Alcohol Dehydrogena		8e-68
1ht0_A	374	Human Gamma-2 Alcohol Dehydrogense Length = 374		1e-67
3cos_A	381	Crystal Structure Of Human Class Ii Alcohol Dehydro		2e-66
1hso_A	374	Human Alpha Alcohol Dehydrogenase (Adh1a) Length =		3e-65
1e3l_A	376	P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase		1e-59
1d1t_A	373	Mutant Of Human Sigma Alcohol Dehydrogenase With Le		2e-59
1e3e_A	376	Mouse Class Ii Alcohol Dehydrogenase Complex With N		2e-59
1agn_A	373	X-Ray Structure Of Human Sigma Alcohol Dehydrogenas		3e-59
1p0c_A	373	Crystal Structure Of The Nadp(H)-Dependent Vertebra		7e-57
1f8f_A	371	Crystal Structure Of Benzyl Alcohol Dehydrogenase F		1e-20
2h6e_A	344	Crystal Structure Of The D-Arabinose Dehydrogenase		1e-11
1rjw_A	339	Crystal Structure Of Nad(+)-Dependent Alcohol Dehyd		3e-10
3pii_A	339	Crystal Structure Of Mutant Of Ht- Alcohol Dehydrog		3e-10
3meq_A	365	Crystal Structure Of Alcohol Dehydrogenase From Bru		2e-09
3qe3_A	355	Sheep Liver Sorbitol Dehydrogenase Length = 355		1e-07
2eer_A	347	Structural Study Of Project Id St2577 From Sulfolob		2e-07
1vj0_A	380	Crystal Structure Of Alcohol Dehydrogenase (Tm0436)		2e-07
1llu_A	342	The Ternary Complex Of Pseudomonas Aeruginosa Alcoh		4e-07
4ilk_A	359	Crystal Structure Of Short Chain Alcohol Dehydrogen		1e-06
1pl7_A	356	Human Sorbitol Dehydrogenase (Apo) Length = 356		3e-06
1r37_A	347	Alcohol Dehydrogenase From Sulfolobus Solfataricus		8e-06
2dq4_A	343	Crystal Structure Of Threonine 3-Dehydrogenase Leng		3e-05
1nto_A	347	N249y Mutant Of Alcohol Dehydrogenase From The Arch		4e-05
3i4c_A	347	Crystal Structure Of Sulfolobus Solfataricus Adh(Ss		4e-05
2hcy_A	347	Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevi		5e-05
3s1l_A	340	Crystal Structure Of Apo-Form Furx Length = 340		5e-05
1pl6_A	356	Human SdhNADHINHIBITOR COMPLEX Length = 356		5e-05
1ykf_A	352	Nadp-Dependent Alcohol Dehydrogenase From Thermoana		7e-05
2dfv_A	347	Hyperthermophilic Threonine Dehydrogenase From Pyro		7e-05
2d8a_A	348	Crystal Structure Of Ph0655 From Pyrococcus Horikos		7e-05
2nvb_A	352	Contribution Of Pro275 To The Thermostability Of Th		8e-05
3gfb_A	350	L-Threonine Dehydrogenase (Tktdh) From The Hyperthe		2e-04
3fpl_A	351	Chimera Of Alcohol Dehydrogenase By Exchange Of The		3e-04

>pdb|3UKO|A Chain A, Crystal Structure Of S-Nitrosoglutathione Reductase From Arabidopsis Thaliana, Complex With Nadh Length = 378

Iteration: 1
 Score =  336 bits (862), Expect = 9e-93,   Method: Compositional matrix adjust.
 Identities = 167/374 (44%), Positives = 220/374 (58%), Gaps = 26/374 (6%)
Query: 3   STAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTP 62
           +T G ++TCKAAVA+E  KPL+I+DV+VAPPQA EVRIKI YT+LC TD Y W  K    
Sbjct: 1   ATQGQVITCKAAVAYEPNKPLVIEDVQVAPPQAGEVRIKILYTALCHTDAYTWSGKDPEG 60
Query: 63  LFPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHC---------------- 106
           LFP I GH                    HV+P +  EC +C+ C                
Sbjct: 61  LFPCILGHEAAGIVESVGEGVTEVQAGDHVIPCYQAECRECKFCKSGKTNLCGKVRSATG 120
Query: 107 ----------RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVST 156
                     RFS+NG+P+ HF+GTSTFS+YTVVH   VAKI+P APLDKVC+L CGV T
Sbjct: 121 VGIMMNDRKSRFSVNGKPIYHFMGTSTFSQYTVVHDVSVAKIDPTAPLDKVCLLGCGVPT 180
Query: 157 GLGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVT 216
           GLGA  N AK E                               +D  SK++E AKKFGV 
Sbjct: 181 GLGAVWNTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVN 240
Query: 217 DFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD 276
           +FVN  +HD+PIQEVI ++T+GGVD S EC GN+  M +A EC H GWG +V+VGV +  
Sbjct: 241 EFVNPKDHDKPIQEVIVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASG 300
Query: 277 AVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKA 336
               T+P  ++  R  KGT FG +K RT +P +V+ YMNK+++++++ITH +   EINKA
Sbjct: 301 QEISTRPFQLVTGRVWKGTAFGGFKSRTQVPWLVEKYMNKEIKVDEYITHNLTLGEINKA 360
Query: 337 FEYMVKGEGLRCII 350
           F+ + +G  LRC++
Sbjct: 361 FDLLHEGTCLRCVL 374

>pdb|4DL9|A Chain A, Crystal Structure Of S-nitrosoglutathione Reductase From Tomato (solanum Lycopersicum) In Complex With Nad+ Length = 396

Iteration: 1
 Score =  336 bits (862), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 164/377 (43%), Positives = 223/377 (59%), Gaps = 26/377 (6%)
Query: 2   SSTAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT 61
           S+T G ++TCKAAVAWE  KPL+I+DV+VAPPQA EVR+K+ YT+LC TD Y W  K   
Sbjct: 18  SATQGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRVKVLYTALCHTDAYTWSGKDPE 77
Query: 62  PLFPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHC--------------- 106
            LFP + GH                    HV+P +  EC +C+ C               
Sbjct: 78  GLFPCVLGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRAAT 137
Query: 107 -----------RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVS 155
                      RFSING+P+ HF+GTSTFS+YTVVH   VAKI+P+APL+KVC+L CGV 
Sbjct: 138 GVGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPVAPLEKVCLLGCGVP 197
Query: 156 TGLGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGV 215
           TGLGA  N AK E                               +D  SK+F+ AK FGV
Sbjct: 198 TGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRIIGIDIDSKKFDRAKNFGV 257
Query: 216 TDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSK 275
           T+F+N  EH++PIQ+VI ++T+GGVD S EC GN+  M SA EC H GWG +V+VGV + 
Sbjct: 258 TEFINPKEHEQPIQQVIVDLTDGGVDYSFECIGNVSVMRSALECCHKGWGTSVIVGVAAS 317
Query: 276 DAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINK 335
                T+P  ++  R  KGT FG +K R+ +PS+VD Y+ K+++++++ITH +  ++INK
Sbjct: 318 GQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPSLVDKYLKKEIKVDEYITHNMTLADINK 377
Query: 336 AFEYMVKGEGLRCIISM 352
           AF+ M  G+ LR ++ M
Sbjct: 378 AFDLMHDGDCLRVVLDM 394

>pdb|1CDO|A Chain A, Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Complexed With Nicotinamide Adenine Dinucleotide (Nad), And Zinc Length = 374

Iteration: 1
 Score =  280 bits (716), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 150/375 (40%), Positives = 206/375 (54%), Gaps = 26/375 (6%)
Query: 3   STAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTP 62
           +T G ++ CKAAVAWEA KPL+I+++EV  P A E+RIKI  T +C TDLY         
Sbjct: 1   ATVGKVIKCKAAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKD 60
Query: 63  LFPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHC---------------- 106
            FP + GH                     V+P+F  +CG+CR C                
Sbjct: 61  GFPVVLGHEGAGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANES 120
Query: 107 ---------RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTG 157
                    RF+  G  V  FLGTSTFS+YTVV+   VAKI+P APLD VC+L CGVSTG
Sbjct: 121 PDVMSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSAPLDTVCLLGCGVSTG 180
Query: 158 LGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTD 217
            GA +N AK E                               VD +  +FE+AK FG TD
Sbjct: 181 FGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATD 240
Query: 218 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA 277
           FVN ++H  PI +V+++MTNGGVD S+EC GN+  M +A E    GWGV+VLVG      
Sbjct: 241 FVNPNDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLHD 300
Query: 278 VFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAF 337
           V  T+PI ++  RT KG+ FG +K +  +P +V  Y++K+++L++FITHR+P   +N A 
Sbjct: 301 V-ATRPIQLIAGRTWKGSMFGGFKGKDGVPKMVKAYLDKKVKLDEFITHRMPLESVNDAI 359
Query: 338 EYMVKGEGLRCIISM 352
           + M  G+ +R ++S+
Sbjct: 360 DLMKHGKCIRTVLSL 374

>pdb|3QJ5|A Chain A, S-Nitrosoglutathione Reductase (Gsnor) In Complex With N6022 Length = 374

Iteration: 1
 Score =  273 bits (699), Expect = 8e-74,   Method: Compositional matrix adjust.
 Identities = 150/374 (40%), Positives = 208/374 (55%), Gaps = 25/374 (6%)
Query: 4   TAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL 63
           +A  ++ CKAAVAWEAGKPL I+++EVAPP+A EVRIKI  T++C TD Y          
Sbjct: 1   SANEVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGC 60
Query: 64  FPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHC----------------- 106
           FP I GH                     V+P++  +CG+C+ C                 
Sbjct: 61  FPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGK 120
Query: 107 --------RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGL 158
                   RF+  G+ + H++GTSTFSEYTVV    VAKI+PLAPLDKVC+L CG+STG 
Sbjct: 121 GLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGY 180
Query: 159 GATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDF 218
           GA +N AK E                               VD +  +F  AK+FG T+ 
Sbjct: 181 GAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATEC 240
Query: 219 VNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAV 278
           +N  +  +PIQEV+ EMT+GGVD S EC GN+  M +A E  H GWGV+V+VGV +    
Sbjct: 241 INPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEE 300
Query: 279 FMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFE 338
             T+P  ++  RT KGT FG +K    +P +V  YM+K++++++F+TH + F EINKAFE
Sbjct: 301 IATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINKAFE 360
Query: 339 YMVKGEGLRCIISM 352
            M  G+ +R ++ +
Sbjct: 361 LMHSGKSIRTVVKI 374

>pdb|2FZW|A Chain A, Structure Of The Binary Complex Of The E67l Mutant Of Human Glutathione-Dependent Formaldehyde Dehydrogenase With Nad(H) Length = 373

Iteration: 1
 Score =  273 bits (698), Expect = 9e-74,   Method: Compositional matrix adjust.
 Identities = 150/373 (40%), Positives = 207/373 (55%), Gaps = 25/373 (6%)
Query: 5   AGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLF 64
           A  ++ CKAAVAWEAGKPL I+++EVAPP+A EVRIKI  T++C TD Y          F
Sbjct: 1   ANEVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCF 60
Query: 65  PRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHC------------------ 106
           P I GH                     V+P++  +CG+C+ C                  
Sbjct: 61  PVILGHLGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG 120
Query: 107 -------RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLG 159
                  RF+  G+ + H++GTSTFSEYTVV    VAKI+PLAPLDKVC+L CG+STG G
Sbjct: 121 LMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYG 180
Query: 160 ATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFV 219
           A +N AK E                               VD +  +F  AK+FG T+ +
Sbjct: 181 AAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECI 240
Query: 220 NTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVF 279
           N  +  +PIQEV+ EMT+GGVD S EC GN+  M +A E  H GWGV+V+VGV +     
Sbjct: 241 NPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEI 300
Query: 280 MTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEY 339
            T+P  ++  RT KGT FG +K    +P +V  YM+K++++++F+TH + F EINKAFE 
Sbjct: 301 ATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINKAFEL 360
Query: 340 MVKGEGLRCIISM 352
           M  G+ +R ++ +
Sbjct: 361 MHSGKSIRTVVKI 373

>pdb|1MC5|A Chain A, Ternary Complex Of Human Glutathione-Dependent Formaldehyde Dehydrogenase With S-(Hydroxymethyl)glutathione And Nadh Length = 374

Iteration: 1
 Score =  273 bits (698), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 150/373 (40%), Positives = 207/373 (55%), Gaps = 25/373 (6%)
Query: 5   AGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLF 64
           A  ++ CKAAVAWEAGKPL I+++EVAPP+A EVRIKI  T++C TD Y          F
Sbjct: 2   ANEVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCF 61
Query: 65  PRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHC------------------ 106
           P I GH                     V+P++  +CG+C+ C                  
Sbjct: 62  PVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG 121
Query: 107 -------RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLG 159
                  RF+  G+ + H++GTSTFSEYTVV    VAKI+PLAPLDKVC+L CG+STG G
Sbjct: 122 LMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYG 181
Query: 160 ATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFV 219
           A +N AK E                               VD +  +F  AK+FG T+ +
Sbjct: 182 AAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECI 241
Query: 220 NTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVF 279
           N  +  +PIQEV+ EMT+GGVD S EC GN+  M +A E  H GWGV+V+VGV +     
Sbjct: 242 NPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEI 301
Query: 280 MTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEY 339
            T+P  ++  RT KGT FG +K    +P +V  YM+K++++++F+TH + F EINKAFE 
Sbjct: 302 ATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINKAFEL 361
Query: 340 MVKGEGLRCIISM 352
           M  G+ +R ++ +
Sbjct: 362 MHSGKSIRTVVKI 374

>pdb|1TEH|A Chain A, Structure Of Human Liver Chichi Alcohol Dehydrogenase (A Glutathione- Dependent Formaldehyde Dehydrogenase) Length = 373

Iteration: 1
 Score =  273 bits (698), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 150/373 (40%), Positives = 207/373 (55%), Gaps = 25/373 (6%)
Query: 5   AGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLF 64
           A  ++ CKAAVAWEAGKPL I+++EVAPP+A EVRIKI  T++C TD Y          F
Sbjct: 1   ANEVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCF 60
Query: 65  PRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHC------------------ 106
           P I GH                     V+P++  +CG+C+ C                  
Sbjct: 61  PVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG 120
Query: 107 -------RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLG 159
                  RF+  G+ + H++GTSTFSEYTVV    VAKI+PLAPLDKVC+L CG+STG G
Sbjct: 121 LMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYG 180
Query: 160 ATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFV 219
           A +N AK E                               VD +  +F  AK+FG T+ +
Sbjct: 181 AAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECI 240
Query: 220 NTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVF 279
           N  +  +PIQEV+ EMT+GGVD S EC GN+  M +A E  H GWGV+V+VGV +     
Sbjct: 241 NPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEI 300
Query: 280 MTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEY 339
            T+P  ++  RT KGT FG +K    +P +V  YM+K++++++F+TH + F EINKAFE 
Sbjct: 301 ATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINKAFEL 360
Query: 340 MVKGEGLRCIISM 352
           M  G+ +R ++ +
Sbjct: 361 MHSGKSIRTVVKI 373

>pdb|1QV6|A Chain A, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT Complexed With Nad+ And 2,4-Difluorobenzyl Alcohol Length = 374

Iteration: 1
 Score =  265 bits (676), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 143/374 (38%), Positives = 201/374 (53%), Gaps = 26/374 (6%)
Query: 3   STAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTP 62
           STAG ++ CKAAV WE  KP  I++VEVAPP+A EVRIK+  T +CR+D         TP
Sbjct: 1   STAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDQVVSGTLVTP 60
Query: 63  LFPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHC---------------- 106
           L P I GH                     V+P+FT +CG CR C                
Sbjct: 61  L-PVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMP 119
Query: 107 ---------RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTG 157
                    RF+  G+P++HFLGTSTFS+YTVV    VAKI+  +PL+KVC++ CG STG
Sbjct: 120 RGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTG 179
Query: 158 LGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTD 217
            G+ + VAK  +                              VD +  RF +AK+ G T+
Sbjct: 180 YGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDRFAKAKEVGATE 239
Query: 218 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA 277
            VN  ++ +PIQEV+ EM+NGGVD S E  G +D M++A  C  + +GV+V+VGVP    
Sbjct: 240 CVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQ 299
Query: 278 VFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAF 337
                P+ +L+ RT KG  FG +K +  +P +V  +M K+  L+  ITH +PF +IN+ F
Sbjct: 300 NLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGF 359
Query: 338 EYMVKGEGLRCIIS 351
           + +  GE +R I++
Sbjct: 360 DLLRSGESIRTILT 373

>pdb|1AXG|A Chain A, Crystal Structure Of The Val203->ala Mutant Of Liver Alcohol Dehydrogenase Complexed With Cofactor Nad And Inhibitor Trifluoroethanol Solved To 2.5 Angstrom Resolution Length = 374

Iteration: 1
 Score =  264 bits (675), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 142/374 (37%), Positives = 202/374 (54%), Gaps = 26/374 (6%)
Query: 3   STAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTP 62
           STAG ++ CKAAV WE  KP  I++VEVAPP+A EVRIK+  T +CR+D +       TP
Sbjct: 1   STAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTP 60
Query: 63  LFPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHC---------------- 106
           L P I GH                     V+P+FT +CG CR C                
Sbjct: 61  L-PVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMP 119
Query: 107 ---------RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTG 157
                    RF+  G+P++HFLGTSTFS+YTVV    VAKI+  +PL+KVC++ CG STG
Sbjct: 120 RGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTG 179
Query: 158 LGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTD 217
            G+ + VAK  +                              VD +  +F +AK+ G T+
Sbjct: 180 YGSAVKVAKVTQGSTCAVFGLGGAGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE 239
Query: 218 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA 277
            VN  ++ +PIQEV+ EM+NGGVD S E  G +D M++A  C  + +GV+V+VGVP    
Sbjct: 240 CVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQ 299
Query: 278 VFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAF 337
                P+ +L+ RT KG  FG +K +  +P +V  +M K+  L+  ITH +PF +IN+ F
Sbjct: 300 NLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGF 359
Query: 338 EYMVKGEGLRCIIS 351
           + +  GE +R I++
Sbjct: 360 DLLRSGESIRTILT 373

>pdb|6ADH|A Chain A, Structure Of Triclinic Ternary Complex Of Horse Liver Alcohol Dehydrogenase At 2.9 Angstroms Resolution Length = 374

Iteration: 1
 Score =  264 bits (675), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 142/374 (37%), Positives = 202/374 (54%), Gaps = 26/374 (6%)
Query: 3   STAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTP 62
           STAG ++ CKAAV WE  KP  I++VEVAPP+A EVRIK+  T +CR+D +       TP
Sbjct: 1   STAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTP 60
Query: 63  LFPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHC---------------- 106
           L P I GH                     V+P+FT +CG CR C                
Sbjct: 61  L-PVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMP 119
Query: 107 ---------RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTG 157
                    RF+  G+P++HFLGTSTFS+YTVV    VAKI+  +PL+KVC++ CG STG
Sbjct: 120 RGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTG 179
Query: 158 LGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTD 217
            G+ + VAK  +                              VD +  +F +AK+ G T+
Sbjct: 180 YGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE 239
Query: 218 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA 277
            VN  ++ +PIQEV+ EM+NGGVD S E  G +D M++A  C  + +GV+V+VGVP    
Sbjct: 240 CVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQ 299
Query: 278 VFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAF 337
                P+ +L+ RT KG  FG +K +  +P +V  +M K+  L+  ITH +PF +IN+ F
Sbjct: 300 NLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGF 359
Query: 338 EYMVKGEGLRCIIS 351
           + +  GE +R I++
Sbjct: 360 DLLRSGESIRTILT 373

>pdb|3OQ6|A Chain A, Horse Liver Alcohol Dehydrogenase A317c Mutant Complexed With Nad+ And 2,3,4,5,6-Pentafluorobenzyl Alcohol Length = 374

Iteration: 1
 Score =  263 bits (673), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 142/374 (37%), Positives = 202/374 (54%), Gaps = 26/374 (6%)
Query: 3   STAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTP 62
           STAG ++ CKAAV WE  KP  I++VEVAPP+A EVRIK+  T +CR+D +       TP
Sbjct: 1   STAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTP 60
Query: 63  LFPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHC---------------- 106
           L P I GH                     V+P+FT +CG CR C                
Sbjct: 61  L-PVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMP 119
Query: 107 ---------RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTG 157
                    RF+  G+P++HFLGTSTFS+YTVV    VAKI+  +PL+KVC++ CG STG
Sbjct: 120 RGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTG 179
Query: 158 LGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTD 217
            G+ + VAK  +                              VD +  +F +AK+ G T+
Sbjct: 180 YGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE 239
Query: 218 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA 277
            VN  ++ +PIQEV+ EM+NGGVD S E  G +D M++A  C  + +GV+V+VGVP    
Sbjct: 240 CVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQ 299
Query: 278 VFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAF 337
                P+ +L+ RT KG  FG +K +  +P +V  +M K+  L+  ITH +PF +IN+ F
Sbjct: 300 NLSMNPMLLLSGRTWKGCIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGF 359
Query: 338 EYMVKGEGLRCIIS 351
           + +  GE +R I++
Sbjct: 360 DLLRSGESIRTILT 373

>pdb|1HDX|A Chain A, Three-Dimensional Structures Of Three Human Alcohol Dehydrogenase Variants: Correlations With Their Functional Differences Length = 374

Iteration: 1
 Score =  263 bits (671), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 139/374 (37%), Positives = 199/374 (53%), Gaps = 26/374 (6%)
Query: 3   STAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTP 62
           STAG ++ CKAAV WE  KP  I+DVEVAPP+A EVRIK+    +CRTD +       TP
Sbjct: 1   STAGKVIKCKAAVLWEVKKPFSIEDVEVAPPKAYEVRIKMVAVGICRTDDHVVSGNLVTP 60
Query: 63  LFPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHC---------------- 106
           L P I GH                     V+P+FT +CG CR C                
Sbjct: 61  L-PVILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNP 119
Query: 107 ---------RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTG 157
                    RF+  G+P++HFLGTSTFS+YTVV    VAKI+  +PL+KVC++ CG STG
Sbjct: 120 RGTLQDGTRRFTCRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTG 179
Query: 158 LGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTD 217
            G+ +NVAK                                 VD +  +F +AK+ G T+
Sbjct: 180 YGSAVNVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATE 239
Query: 218 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA 277
            +N  ++ +PIQEV+ EMT+GGVD S E  G +D M+++  C H+  G +V+VGVP    
Sbjct: 240 CINPQDYKKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPASQ 299
Query: 278 VFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAF 337
                P+ +L  RT KG  +G +K +  +P +V  +M K+  L+  ITH +PF +IN+ F
Sbjct: 300 NLSINPMLLLTGRTWKGAVYGGFKSKEGIPKLVADFMAKKFSLDALITHVLPFEKINEGF 359
Query: 338 EYMVKGEGLRCIIS 351
           + +  G+ +R +++
Sbjct: 360 DLLHSGKSIRTVLT 373

>pdb|1N8K|A Chain A, Horse Liver Alcohol Dehydrogenase Val292thr Mutant Complexed To Nad+ And Pyrazole Length = 374

Iteration: 1
 Score =  263 bits (671), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 141/374 (37%), Positives = 201/374 (53%), Gaps = 26/374 (6%)
Query: 3   STAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTP 62
           STAG ++ CKAAV WE  KP  I++VEVAPP+A EVRIK+  T +CR+D +       TP
Sbjct: 1   STAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTP 60
Query: 63  LFPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHC---------------- 106
           L P I GH                     V+P+FT +CG CR C                
Sbjct: 61  L-PVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMP 119
Query: 107 ---------RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTG 157
                    RF+  G+P++HFLGTSTFS+YTVV    VAKI+  +PL+KVC++ CG STG
Sbjct: 120 RGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTG 179
Query: 158 LGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTD 217
            G+ + VAK  +                              VD +  +F +AK+ G T+
Sbjct: 180 YGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE 239
Query: 218 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA 277
            VN  ++ +PIQEV+ EM+NGGVD S E  G +D M++A  C  + +GV+V+ GVP    
Sbjct: 240 CVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVITGVPPDSQ 299
Query: 278 VFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAF 337
                P+ +L+ RT KG  FG +K +  +P +V  +M K+  L+  ITH +PF +IN+ F
Sbjct: 300 NLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGF 359
Query: 338 EYMVKGEGLRCIIS 351
           + +  GE +R I++
Sbjct: 360 DLLRSGESIRTILT 373

>pdb|1A71|A Chain A, Ternary Complex Of An Active Site Double Mutant Of Horse Liver Alcohol Dehydrogenase, Phe93>trp, Val203>ala With Nad And Trifluoroethanol Length = 374

Iteration: 1
 Score =  262 bits (670), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 141/374 (37%), Positives = 202/374 (54%), Gaps = 26/374 (6%)
Query: 3   STAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTP 62
           STAG ++ CKAAV WE  KP  I++VEVAPP+A EVRIK+  T +CR+D +       TP
Sbjct: 1   STAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTP 60
Query: 63  LFPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHC---------------- 106
           L P I GH                     V+P++T +CG CR C                
Sbjct: 61  L-PVIAGHEAAGIVESIGEGVTTVRPGDKVIPLWTPQCGKCRVCKHPEGNFCLKNDLSMP 119
Query: 107 ---------RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTG 157
                    RF+  G+P++HFLGTSTFS+YTVV    VAKI+  +PL+KVC++ CG STG
Sbjct: 120 RGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTG 179
Query: 158 LGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTD 217
            G+ + VAK  +                              VD +  +F +AK+ G T+
Sbjct: 180 YGSAVKVAKVTQGSTCAVFGLGGAGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE 239
Query: 218 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA 277
            VN  ++ +PIQEV+ EM+NGGVD S E  G +D M++A  C  + +GV+V+VGVP    
Sbjct: 240 CVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQ 299
Query: 278 VFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAF 337
                P+ +L+ RT KG  FG +K +  +P +V  +M K+  L+  ITH +PF +IN+ F
Sbjct: 300 NLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGF 359
Query: 338 EYMVKGEGLRCIIS 351
           + +  GE +R I++
Sbjct: 360 DLLRSGESIRTILT 373

>pdb|1AXE|A Chain A, Crystal Structure Of The Active-Site Mutant Phe93->trp Of Horse Liver Alcohol Dehydrogenase In Complex With Nad And Inhibitor Trifluoroethanol Length = 374

Iteration: 1
 Score =  262 bits (669), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 141/374 (37%), Positives = 202/374 (54%), Gaps = 26/374 (6%)
Query: 3   STAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTP 62
           STAG ++ CKAAV WE  KP  I++VEVAPP+A EVRIK+  T +CR+D +       TP
Sbjct: 1   STAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTP 60
Query: 63  LFPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHC---------------- 106
           L P I GH                     V+P++T +CG CR C                
Sbjct: 61  L-PVIAGHEAAGIVESIGEGVTTVRPGDKVIPLWTPQCGKCRVCKHPEGNFCLKNDLSMP 119
Query: 107 ---------RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTG 157
                    RF+  G+P++HFLGTSTFS+YTVV    VAKI+  +PL+KVC++ CG STG
Sbjct: 120 RGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTG 179
Query: 158 LGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTD 217
            G+ + VAK  +                              VD +  +F +AK+ G T+
Sbjct: 180 YGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE 239
Query: 218 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA 277
            VN  ++ +PIQEV+ EM+NGGVD S E  G +D M++A  C  + +GV+V+VGVP    
Sbjct: 240 CVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQ 299
Query: 278 VFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAF 337
                P+ +L+ RT KG  FG +K +  +P +V  +M K+  L+  ITH +PF +IN+ F
Sbjct: 300 NLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGF 359
Query: 338 EYMVKGEGLRCIIS 351
           + +  GE +R I++
Sbjct: 360 DLLRSGESIRTILT 373

>pdb|1JU9|A Chain A, Horse Liver Alcohol Dehydrogenase Val292ser Mutant Length = 374

Iteration: 1
 Score =  262 bits (669), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 141/374 (37%), Positives = 201/374 (53%), Gaps = 26/374 (6%)
Query: 3   STAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTP 62
           STAG ++ CKAAV WE  KP  I++VEVAPP+A EVRIK+  T +CR+D +       TP
Sbjct: 1   STAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTP 60
Query: 63  LFPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHC---------------- 106
           L P I GH                     V+P+FT +CG CR C                
Sbjct: 61  L-PVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMP 119
Query: 107 ---------RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTG 157
                    RF+  G+P++HFLGTSTFS+YTVV    VAKI+  +PL+KVC++ CG STG
Sbjct: 120 RGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTG 179
Query: 158 LGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTD 217
            G+ + VAK  +                              VD +  +F +AK+ G T+
Sbjct: 180 YGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE 239
Query: 218 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA 277
            VN  ++ +PIQEV+ EM+NGGVD S E  G +D M++A  C  + +GV+V+ GVP    
Sbjct: 240 CVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVISGVPPDSQ 299
Query: 278 VFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAF 337
                P+ +L+ RT KG  FG +K +  +P +V  +M K+  L+  ITH +PF +IN+ F
Sbjct: 300 NLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGF 359
Query: 338 EYMVKGEGLRCIIS 351
           + +  GE +R I++
Sbjct: 360 DLLRSGESIRTILT 373

>pdb|1MGO|A Chain A, Horse Liver Alcohol Dehydrogenase Phe93ala Mutant Length = 374

Iteration: 1
 Score =  261 bits (666), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 141/374 (37%), Positives = 201/374 (53%), Gaps = 26/374 (6%)
Query: 3   STAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTP 62
           STAG ++ CKAAV WE  KP  I++VEVAPP+A EVRIK+  T +CR+D +       TP
Sbjct: 1   STAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTP 60
Query: 63  LFPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHC---------------- 106
           L P I GH                     V+P+ T +CG CR C                
Sbjct: 61  L-PVIAGHEAAGIVESIGEGVTTVRPGDKVIPLATPQCGKCRVCKHPEGNFCLKNDLSMP 119
Query: 107 ---------RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTG 157
                    RF+  G+P++HFLGTSTFS+YTVV    VAKI+  +PL+KVC++ CG STG
Sbjct: 120 RGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTG 179
Query: 158 LGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTD 217
            G+ + VAK  +                              VD +  +F +AK+ G T+
Sbjct: 180 YGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE 239
Query: 218 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA 277
            VN  ++ +PIQEV+ EM+NGGVD S E  G +D M++A  C  + +GV+V+VGVP    
Sbjct: 240 CVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQ 299
Query: 278 VFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAF 337
                P+ +L+ RT KG  FG +K +  +P +V  +M K+  L+  ITH +PF +IN+ F
Sbjct: 300 NLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGF 359
Query: 338 EYMVKGEGLRCIIS 351
           + +  GE +R I++
Sbjct: 360 DLLRSGESIRTILT 373

>pdb|1HDY|A Chain A, Three-Dimensional Structures Of Three Human Alcohol Dehydrogenase Variants: Correlations With Their Functional Differences Length = 374

Iteration: 1
 Score =  260 bits (664), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 138/374 (36%), Positives = 198/374 (52%), Gaps = 26/374 (6%)
Query: 3   STAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTP 62
           STAG ++ CKAAV WE  KP  I+DVEVAPP+A EVRIK+    +C TD +       TP
Sbjct: 1   STAGKVIKCKAAVLWEVKKPFSIEDVEVAPPKAYEVRIKMVAVGICHTDDHVVSGNLVTP 60
Query: 63  LFPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHC---------------- 106
           L P I GH                     V+P+FT +CG CR C                
Sbjct: 61  L-PVILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNP 119
Query: 107 ---------RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTG 157
                    RF+  G+P++HFLGTSTFS+YTVV    VAKI+  +PL+KVC++ CG STG
Sbjct: 120 RGTLQDGTRRFTCRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTG 179
Query: 158 LGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTD 217
            G+ +NVAK                                 VD +  +F +AK+ G T+
Sbjct: 180 YGSAVNVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATE 239
Query: 218 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA 277
            +N  ++ +PIQEV+ EMT+GGVD S E  G +D M+++  C H+  G +V+VGVP    
Sbjct: 240 CINPQDYKKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPASQ 299
Query: 278 VFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAF 337
                P+ +L  RT KG  +G +K +  +P +V  +M K+  L+  ITH +PF +IN+ F
Sbjct: 300 NLSINPMLLLTGRTWKGAVYGGFKSKEGIPKLVADFMAKKFSLDALITHVLPFEKINEGF 359
Query: 338 EYMVKGEGLRCIIS 351
           + +  G+ +R +++
Sbjct: 360 DLLHSGKSIRTVLT 373

>pdb|1HDZ|A Chain A, Three-Dimensional Structures Of Three Human Alcohol Dehydrogenase Variants: Correlations With Their Functional Differences Length = 374

Iteration: 1
 Score =  259 bits (663), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 138/374 (36%), Positives = 198/374 (52%), Gaps = 26/374 (6%)
Query: 3   STAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTP 62
           STAG ++ CKAAV WE  KP  I+DVEVAPP+A EVRIK+    +C TD +       TP
Sbjct: 1   STAGKVIKCKAAVLWEVKKPFSIEDVEVAPPKAYEVRIKMVAVGICGTDDHVVSGNLVTP 60
Query: 63  LFPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHC---------------- 106
           L P I GH                     V+P+FT +CG CR C                
Sbjct: 61  L-PVILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNP 119
Query: 107 ---------RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTG 157
                    RF+  G+P++HFLGTSTFS+YTVV    VAKI+  +PL+KVC++ CG STG
Sbjct: 120 RGTLQDGTRRFTCRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTG 179
Query: 158 LGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTD 217
            G+ +NVAK                                 VD +  +F +AK+ G T+
Sbjct: 180 YGSAVNVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATE 239
Query: 218 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA 277
            +N  ++ +PIQEV+ EMT+GGVD S E  G +D M+++  C H+  G +V+VGVP    
Sbjct: 240 CINPQDYKKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPASQ 299
Query: 278 VFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAF 337
                P+ +L  RT KG  +G +K +  +P +V  +M K+  L+  ITH +PF +IN+ F
Sbjct: 300 NLSINPMLLLTGRTWKGAVYGGFKSKEGIPKLVADFMAKKFSLDALITHVLPFEKINEGF 359
Query: 338 EYMVKGEGLRCIIS 351
           + +  G+ +R +++
Sbjct: 360 DLLHSGKSIRTVLT 373

>pdb|1HTB|A Chain A, Crystallization Of Human Beta3 Alcohol Dehydrogenase (10 MgML) IN 100 MM SODIUM PHOSPHATE (PH 7.5), 7.5 MM NAD+ And 1 Mm 4-Iodopyrazole At 25 C Length = 374

Iteration: 1
 Score =  259 bits (662), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 138/374 (36%), Positives = 198/374 (52%), Gaps = 26/374 (6%)
Query: 3   STAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTP 62
           STAG ++ CKAAV WE  KP  I+DVEVAPP+A EVRIK+    +CRTD +       TP
Sbjct: 1   STAGKVIKCKAAVLWEVKKPFSIEDVEVAPPKAYEVRIKMVAVGICRTDDHVVSGNLVTP 60
Query: 63  LFPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHC---------------- 106
           L P I GH                     V+P+FT +CG CR C                
Sbjct: 61  L-PVILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNP 119
Query: 107 ---------RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTG 157
                    RF+  G+P++HFLGTSTFS+YTVV    VAKI+  +PL+KVC++ CG STG
Sbjct: 120 RGTLQDGTRRFTCRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTG 179
Query: 158 LGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTD 217
            G+ +NVAK                                 VD +  +F +AK+ G T+
Sbjct: 180 YGSAVNVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATE 239
Query: 218 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA 277
            +N  ++ +PIQEV+ EMT+GGVD S E  G +D M+++  C H+  G +V+VGVP    
Sbjct: 240 CINPQDYKKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPASQ 299
Query: 278 VFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAF 337
                P+ +L  RT KG  +G +K +  +P +V  +M K+  L+  ITH +PF +IN+ F
Sbjct: 300 NLSINPMLLLTGRTWKGAVYGGFKSKEGIPKLVADFMAKKFSLDALITHVLPFEKINEGF 359
Query: 338 EYMVKGEGLRCIIS 351
           + +  G+ +  +++
Sbjct: 360 DLLHSGKSICTVLT 373

>pdb|1QLH|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nad Double Mutant Of Gly 293 Ala And Pro 295 Thr Length = 374

Iteration: 1
 Score =  259 bits (662), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 140/374 (37%), Positives = 200/374 (53%), Gaps = 26/374 (6%)
Query: 3   STAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTP 62
           STAG ++ CKAAV WE  KP  I++VEVAPP+A EVRIK+  T +CR+D +       TP
Sbjct: 1   STAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTP 60
Query: 63  LFPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHC---------------- 106
           L P I GH                     V+P+FT +CG CR C                
Sbjct: 61  L-PVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMP 119
Query: 107 ---------RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTG 157
                    RF+  G+P++HFLGTSTFS+YTVV    VAKI+  +PL+KVC++ CG STG
Sbjct: 120 RGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTG 179
Query: 158 LGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTD 217
            G+ + VAK  +                              VD +  +F +AK+ G T+
Sbjct: 180 YGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE 239
Query: 218 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA 277
            VN  ++ +PIQEV+ EM+NGGVD S E  G +D M++A  C  + +GV+V+V V     
Sbjct: 240 CVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVAVTPDSQ 299
Query: 278 VFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAF 337
                P+ +L+ RT KG  FG +K +  +P +V  +M K+  L+  ITH +PF +IN+ F
Sbjct: 300 NLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGF 359
Query: 338 EYMVKGEGLRCIIS 351
           + +  GE +R I++
Sbjct: 360 DLLRSGESIRTILT 373

>pdb|1EE2|B Chain B, The Structure Of Steroid-Active Alcohol Dehydrogenase At 1.54 A Resolution Length = 373

Iteration: 1
 Score =  255 bits (651), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 137/373 (36%), Positives = 198/373 (53%), Gaps = 25/373 (6%)
Query: 3   STAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTP 62
           STAG ++ CKAAV WE  KP  I++VEVAPP+A EVRIK+    +CR+D +        P
Sbjct: 1   STAGKVIKCKAAVLWEQKKPFSIEEVEVAPPKAHEVRIKMVAAGICRSDDHVVSGTLVAP 60
Query: 63  LFPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHC---------------- 106
           L P I GH                     V+P+F  +CG C  C                
Sbjct: 61  L-PVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFIPQCGKCSVCKHPEGNLCLKNLSMPR 119
Query: 107 --------RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGL 158
                   RF+  G+P++HFLGTSTFS+YTVV    VAKI+  +PL+KVC++ CG STG 
Sbjct: 120 GTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLVGCGFSTGY 179
Query: 159 GATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDF 218
           G+ + VAK  +                              VD +  +F +AK+ G T+ 
Sbjct: 180 GSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATEC 239
Query: 219 VNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAV 278
           VN  ++ +PIQEV+ EM+NGGVD S E  G +D M++A  C  + +GV+V+VGVP     
Sbjct: 240 VNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVAALSCCQEAYGVSVIVGVPPDSQN 299
Query: 279 FMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFE 338
               P+ +L+ RT KG  FG +K +  +P +V  +M K+  L+  ITH +PF +IN+ F+
Sbjct: 300 LSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFD 359
Query: 339 YMVKGEGLRCIIS 351
            +  G+ +R I++
Sbjct: 360 LLRSGKSIRTILT 372

>pdb|1EE2|A Chain A, The Structure Of Steroid-Active Alcohol Dehydrogenase At 1.54 A Resolution Length = 373

Iteration: 1
 Score =  253 bits (647), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 136/372 (36%), Positives = 197/372 (52%), Gaps = 25/372 (6%)
Query: 4   TAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL 63
           TAG ++ CKAAV WE  KP  I++VEVAPP+A EVRIK+    +CR+D +        PL
Sbjct: 2   TAGKVIKCKAAVLWEQKKPFSIEEVEVAPPKAHEVRIKMVAAGICRSDDHVVSGTLVAPL 61
Query: 64  FPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHC----------------- 106
            P I GH                     V+P+F  +CG C  C                 
Sbjct: 62  -PVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFIPQCGKCSVCKHPEGNLCLKNLSMPRG 120
Query: 107 -------RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLG 159
                  RF+  G+P++HFLGTSTFS+YTVV    VAKI+  +PL+KVC++ CG STG G
Sbjct: 121 TMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLVGCGFSTGYG 180
Query: 160 ATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFV 219
           + + VAK  +                              VD +  +F +AK+ G T+ V
Sbjct: 181 SAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECV 240
Query: 220 NTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVF 279
           N  ++ +PIQEV+ EM+NGGVD S E  G +D M++A  C  + +GV+V+VGVP      
Sbjct: 241 NPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVAALSCCQEAYGVSVIVGVPPDSQNL 300
Query: 280 MTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEY 339
              P+ +L+ RT KG  FG +K +  +P +V  +M K+  L+  ITH +PF +IN+ F+ 
Sbjct: 301 SMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDL 360
Query: 340 MVKGEGLRCIIS 351
           +  G+ +R I++
Sbjct: 361 LRSGKSIRTILT 372

>pdb|1HT0|A Chain A, Human Gamma-2 Alcohol Dehydrogense Length = 374

Iteration: 1
 Score =  253 bits (646), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 134/374 (35%), Positives = 198/374 (52%), Gaps = 26/374 (6%)
Query: 3   STAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTP 62
           STAG ++ CKAAV WE  KP  I++VEVAPP+A EVRIK+    +CR+D +       TP
Sbjct: 1   STAGKVIKCKAAVLWELKKPFSIEEVEVAPPKAHEVRIKMVAAGICRSDEHVVSGNLVTP 60
Query: 63  LFPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHC---------------- 106
           L P I GH                     V+P+FT +CG CR C                
Sbjct: 61  L-PVILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRICKNPESNYCLKNDLGNP 119
Query: 107 ---------RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTG 157
                    RF+ +G+P++HF+G STFS+YTVV    VAKI+  +PL+KVC++ CG STG
Sbjct: 120 RGTLQDGTRRFTCSGKPIHHFVGVSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTG 179
Query: 158 LGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTD 217
            G+ + VAK                                 VD +  +F +AK+ G T+
Sbjct: 180 YGSAVKVAKVTPGSTCAVFGLGGVGLSVVMGCKAAGAARIIAVDINKDKFAKAKELGATE 239
Query: 218 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA 277
            +N  ++ +PIQEV+ EMT+GGVD S E  G +D M+++  C H+  G +V+VGVP    
Sbjct: 240 CINPQDYKKPIQEVLKEMTDGGVDFSFEVIGQLDTMMASLLCCHEACGTSVIVGVPPDSQ 299
Query: 278 VFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAF 337
                P+ +L  RT KG  FG +K +  +P +V  +M K+  L+  IT+ +PF +IN+ F
Sbjct: 300 NLSINPMLLLTGRTWKGAIFGGFKSKESVPKLVADFMAKKFSLDALITNVLPFEKINEGF 359
Query: 338 EYMVKGEGLRCIIS 351
           + +  G+ +R +++
Sbjct: 360 DLLRSGKSIRTVLT 373

>pdb|3COS|A Chain A, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase (Adh4) In Complex With Nad And Zn Length = 381

Iteration: 1
 Score =  249 bits (635), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 137/376 (36%), Positives = 194/376 (51%), Gaps = 29/376 (7%)
Query: 4   TAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL 63
           T G ++ CKAA+AWEAGKPL I++VEVAPP+A EVRI+I  TSLC TD    +SK +   
Sbjct: 4   TKGKVIKCKAAIAWEAGKPLCIEEVEVAPPKAHEVRIQIIATSLCHTDATVIDSKFEGLA 63
Query: 64  FPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHC----------------- 106
           FP I GH                     V+P++   C  C+ C                 
Sbjct: 64  FPVIVGHEAAGIVESIGPGVTNVKPGDKVIPLYAPLCRKCKFCLSPLTNLCGKISNLKSP 123
Query: 107 ------------RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGV 154
                       RF+  G+PV HF GTSTFS+YTVV    +AKI+  A L++VC+L CG 
Sbjct: 124 ASDQQLMEDKTSRFTCKGKPVYHFFGTSTFSQYTVVSDINLAKIDDDANLERVCLLGCGF 183
Query: 155 STGLGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFG 214
           STG GA +N AK                                 +D +S++F +AK  G
Sbjct: 184 STGYGAAINNAKVTPGSTCAVFGLGGVGLSAVMGCKAAGASRIIGIDINSEKFVKAKALG 243
Query: 215 VTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 274
            TD +N  +  +PIQEVI E+T GGVD +++C G  + M +A +C   GWG    +GV +
Sbjct: 244 ATDCLNPRDLHKPIQEVIIELTKGGVDFALDCAGGSETMKAALDCTTAGWGSCTFIGVAA 303
Query: 275 KDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEIN 334
                   P  ++  RT+ GTFFG +K    +P +V  Y NK+  L+  +TH +PF +I+
Sbjct: 304 GSKGLTVFPEELIIGRTINGTFFGGWKSVDSIPKLVTDYKNKKFNLDALVTHTLPFDKIS 363
Query: 335 KAFEYMVKGEGLRCII 350
           +AF+ M +G+ +R I+
Sbjct: 364 EAFDLMNQGKSIRTIL 379

>pdb|1HSO|A Chain A, Human Alpha Alcohol Dehydrogenase (Adh1a) Length = 374

Iteration: 1
 Score =  245 bits (625), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 134/373 (35%), Positives = 192/373 (51%), Gaps = 26/373 (6%)
Query: 3   STAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTP 62
           STAG ++ CKAAV WE  KP  I++VEVAPP+A EVRIK+    +C TD +       TP
Sbjct: 1   STAGKVIKCKAAVLWELKKPFSIEEVEVAPPKAHEVRIKMVAVGICGTDDHVVSGTMVTP 60
Query: 63  LFPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHC---------------- 106
           L P I GH                     V+P+   +CG CR C                
Sbjct: 61  L-PVILGHEAAGIVESVGEGVTTVKPGDKVIPLAIPQCGKCRICKNPESNYCLKNDVSNP 119
Query: 107 ---------RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTG 157
                    RF+   +P++HFLG STFS+YTVV    VAKI+  +PL+KVC++ CG STG
Sbjct: 120 QGTLQDGTSRFTCRRKPIHHFLGISTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTG 179
Query: 158 LGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTD 217
            G+ +NVAK                                 VD +  +F +AK+ G T+
Sbjct: 180 YGSAVNVAKVTPGSTCAVFGLGGVGLSAIMGCKAAGAARIIAVDINKDKFAKAKELGATE 239
Query: 218 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA 277
            +N  ++ +PIQEV+ EMT+GGVD S E  G +D M+++  C H+  G +V+VGVP    
Sbjct: 240 CINPQDYKKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPDSQ 299
Query: 278 VFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAF 337
                P+ +L  RT KG   G +K +  +P +V  +M K+  L+  ITH +PF +IN+ F
Sbjct: 300 NLSMNPMLLLTGRTWKGAILGGFKSKECVPKLVADFMAKKFSLDALITHVLPFEKINEGF 359
Query: 338 EYMVKGEGLRCII 350
           + +  G+ +R I+
Sbjct: 360 DLLHSGKSIRTIL 372

>pdb|1E3L|A Chain A, P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh Length = 376

Iteration: 1
 Score =  226 bits (576), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 122/379 (32%), Positives = 193/379 (50%), Gaps = 34/379 (8%)
Query: 4   TAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL 63
           T G ++ CKAA+AW+ G PL I+++EV+PP+A EVRI++  T +C TD+   + K +  L
Sbjct: 2   TQGKVIKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCHTDINATDPK-KKAL 60
Query: 64  FPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHC----------------- 106
           FP + GH                     V+P F  +C  C+ C                 
Sbjct: 61  FPVVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYP 120
Query: 107 ------------RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGV 154
                       RF+  G  + HF+G S+FS+YTVV    +A+++  A L++VC++ CG 
Sbjct: 121 TIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARVDDEANLERVCLIGCGF 180
Query: 155 STGLGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFG 214
           S+G GA +N AK                                 +D + ++F +AK  G
Sbjct: 181 SSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALG 240
Query: 215 VTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 274
            TD +N  E D+P+Q+VI E+T GGVD S++C G    + +A +C   GWG   +VG   
Sbjct: 241 ATDCLNPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKV 300
Query: 275 KDAVFMTKP-INVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEI 333
            +   MT P ++V+  R++ GTFFG +K    +P++V  Y NK+ +L+  +TH +PF  I
Sbjct: 301 DE---MTIPTVDVILGRSINGTFFGGWKSVDSVPNLVSDYKNKKFDLDLLVTHALPFESI 357
Query: 334 NKAFEYMVKGEGLRCIISM 352
           N A + M +G+ +R I++ 
Sbjct: 358 NDAIDLMKEGKSIRTILTF 376

>pdb|1D1T|A Chain A, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine At Position 141 Length = 373

Iteration: 1
 Score =  226 bits (575), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 123/372 (33%), Positives = 186/372 (50%), Gaps = 25/372 (6%)
Query: 4   TAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL 63
           TAG ++ CKAAV WE  +P  I+++EVAPP+  EVRIKI  T +CRTD +  +       
Sbjct: 2   TAGKVIKCKAAVLWEQKQPFSIEEIEVAPPKTKEVRIKILATGICRTDDHVIKGT-MVSK 60
Query: 64  FPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCR---------------- 107
           FP I GH                     V+P+F  +C +C  CR                
Sbjct: 61  FPVIVGHEATGIVESIGEGVTTVKPGDKVIPLFLPQCRECNACRNPDGNLCIRSDITGRG 120
Query: 108 --------FSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLG 159
                   F+  G+PV+HFL TSTF+EYTVV    VAKI+  AP +KVC++ CG STG G
Sbjct: 121 VLADGTTRFTCKGKPVHHFLNTSTFTEYTVVDESSVAKIDDAAPPEKVCLIGCGFSTGYG 180
Query: 160 ATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFV 219
           A +   K +                               +D +  +FE+A   G T+ +
Sbjct: 181 AAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECI 240
Query: 220 NTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVF 279
           +  +  +PI EV++EMT   V  + E  G+++ MI A    H  +G +V+VGVP    + 
Sbjct: 241 SPKDSTKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSAKML 300
Query: 280 MTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEY 339
              P+ +   RT KG  FG  K R D+P +V  ++ K+ +L++ ITH +PF +I++ FE 
Sbjct: 301 TYDPMLLFTGRTWKGCVFGGLKSRDDVPKLVTEFLAKKFDLDQLITHVLPFKKISEGFEL 360
Query: 340 MVKGEGLRCIIS 351
           +  G+ +R +++
Sbjct: 361 LNSGQSIRTVLT 372

>pdb|1E3E|A Chain A, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh Length = 376

Iteration: 1
 Score =  225 bits (574), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 122/379 (32%), Positives = 193/379 (50%), Gaps = 34/379 (8%)
Query: 4   TAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL 63
           T G ++ CKAA+AW+ G PL I+++EV+PP+A EVRI++  T +C TD+   + K +  L
Sbjct: 2   TQGKVIKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPK-KKAL 60
Query: 64  FPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHC----------------- 106
           FP + GH                     V+P F  +C  C+ C                 
Sbjct: 61  FPVVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYP 120
Query: 107 ------------RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGV 154
                       RF+  G  + HF+G S+FS+YTVV    +A+++  A L++VC++ CG 
Sbjct: 121 TIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARVDDEANLERVCLIGCGF 180
Query: 155 STGLGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFG 214
           S+G GA +N AK                                 +D + ++F +AK  G
Sbjct: 181 SSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALG 240
Query: 215 VTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 274
            TD +N  E D+P+Q+VI E+T GGVD S++C G    + +A +C   GWG   +VG   
Sbjct: 241 ATDCLNPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKV 300
Query: 275 KDAVFMTKP-INVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEI 333
            +   MT P ++V+  R++ GTFFG +K    +P++V  Y NK+ +L+  +TH +PF  I
Sbjct: 301 DE---MTIPTVDVILGRSINGTFFGGWKSVDSVPNLVSDYKNKKFDLDLLVTHALPFESI 357
Query: 334 NKAFEYMVKGEGLRCIISM 352
           N A + M +G+ +R I++ 
Sbjct: 358 NDAIDLMKEGKSIRTILTF 376

>pdb|1AGN|A Chain A, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase Length = 373

Iteration: 1
 Score =  225 bits (573), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 122/372 (32%), Positives = 186/372 (50%), Gaps = 25/372 (6%)
Query: 4   TAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL 63
           TAG ++ CKAAV WE  +P  I+++EVAPP+  EVRIKI  T +CRTD +  +       
Sbjct: 2   TAGKVIKCKAAVLWEQKQPFSIEEIEVAPPKTKEVRIKILATGICRTDDHVIKGT-MVSK 60
Query: 64  FPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCR---------------- 107
           FP I GH                     V+P+F  +C +C  CR                
Sbjct: 61  FPVIVGHEATGIVESIGEGVTTVKPGDKVIPLFLPQCRECNACRNPDGNLCIRSDITGRG 120
Query: 108 --------FSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLG 159
                   F+  G+PV+HF+ TSTF+EYTVV    VAKI+  AP +KVC++ CG STG G
Sbjct: 121 VLADGTTRFTCKGKPVHHFMNTSTFTEYTVVDESSVAKIDDAAPPEKVCLIGCGFSTGYG 180
Query: 160 ATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFV 219
           A +   K +                               +D +  +FE+A   G T+ +
Sbjct: 181 AAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECI 240
Query: 220 NTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVF 279
           +  +  +PI EV++EMT   V  + E  G+++ MI A    H  +G +V+VGVP    + 
Sbjct: 241 SPKDSTKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSAKML 300
Query: 280 MTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEY 339
              P+ +   RT KG  FG  K R D+P +V  ++ K+ +L++ ITH +PF +I++ FE 
Sbjct: 301 TYDPMLLFTGRTWKGCVFGGLKSRDDVPKLVTEFLAKKFDLDQLITHVLPFKKISEGFEL 360
Query: 340 MVKGEGLRCIIS 351
           +  G+ +R +++
Sbjct: 361 LNSGQSIRTVLT 372

>pdb|1P0C|A Chain A, Crystal Structure Of The Nadp(H)-Dependent Vertebrate Alcohol Dehydrogenase (Adh8) Length = 373

Iteration: 1
 Score =  217 bits (553), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 129/372 (34%), Positives = 192/372 (51%), Gaps = 28/372 (7%)
Query: 4   TAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL 63
           TAG  +TCKAAVAWE  KPL ++ + VAPP+A EVRIKI  + +C +D    +    +  
Sbjct: 3   TAGKDITCKAAVAWEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIPSK- 61
Query: 64  FPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHC----------------- 106
           FP I GH                     V+P+F  +CG CR C                 
Sbjct: 62  FPVILGHEAVGVVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKT 121
Query: 107 --------RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGL 158
                   RF+  G+P+ + +GTSTF+EYTVV    VAKI+P APL+  C++ CG +TG 
Sbjct: 122 GLMADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKAPLES-CLIGCGFATGY 180
Query: 159 GATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDF 218
           GA +N AK                                 V     +F +A + G T+ 
Sbjct: 181 GAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATEC 240
Query: 219 VNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAV 278
           +N  ++D+PI EVI E TNGGVD +VEC G I+ M++A +  + G GV V++G+ S +  
Sbjct: 241 LNPKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNER 300
Query: 279 FMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFE 338
               P+ +L  R+LKG+ FG +K   ++  +VD YM K++ +   ++ ++   +INKAFE
Sbjct: 301 LPLDPLLLLTGRSLKGSVFGGFKGE-EVSRLVDDYMKKKINVNFLVSTKLTLDQINKAFE 359
Query: 339 YMVKGEGLRCII 350
            +  G+G+R I+
Sbjct: 360 LLSSGQGVRSIM 371

>pdb|1F8F|A Chain A, Crystal Structure Of Benzyl Alcohol Dehydrogenase From Acinetobacter Calcoaceticus Length = 371

Iteration: 1
 Score = 97.1 bits (240), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 92/369 (24%), Positives = 144/369 (39%), Gaps = 36/369 (9%)
Query: 13  AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHXX 72
           AAV    G    +Q +++  PQ  EV +K+  T +C TDL   + K   PL P + GH  
Sbjct: 9   AAVTPCKGADFELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYPVPL-PAVLGHEG 67
Query: 73  XXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCR----------FSIN----------- 111
                             HV+  + G CG C  C           F  N           
Sbjct: 68  SGIIEAIGPNVTELQVGDHVVLSY-GYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHA 126
Query: 112 ------GEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVA 165
                 G   +HF   S+F+ Y +       K+    P++ +  L CG+ TG GA +N  
Sbjct: 127 LCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKDVPIELLGPLGCGIQTGAGACINAL 186
Query: 166 KPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNTSEHD 225
           K                                 VD    R E AK+ G T  +N+   D
Sbjct: 187 KVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINSKTQD 246
Query: 226 RPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS--KDAVFMTKP 283
            P+   I E+T+GGV+ ++E TG+ + +    + +     +AV VG P     A F    
Sbjct: 247 -PV-AAIKEITDGGVNFALESTGSPEILKQGVDALGILGKIAV-VGAPQLGTTAQFDVND 303
Query: 284 INVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKG 343
           + +L  +T+ G   G+  P+  +P +V +Y   +   ++ +     F EIN+A     KG
Sbjct: 304 L-LLGGKTILGVVEGSGSPKKFIPELVRLYQQGKFPFDQLVKFY-AFDEINQAAIDSRKG 361
Query: 344 EGLRCIISM 352
             L+ II +
Sbjct: 362 ITLKPIIKI 370

>pdb|2H6E|A Chain A, Crystal Structure Of The D-Arabinose Dehydrogenase From Sulfolobus Solfataricus Length = 344

Iteration: 1
 Score = 67.0 bits (162), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 83/348 (23%), Positives = 144/348 (41%), Gaps = 26/348 (7%)
Query: 8   ILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFW---ESKGQTPLF 64
           ++  KAA+  +  +PL I+DV +  PQ  EV I+I    +CRTDL  W   E+K Q    
Sbjct: 1   MVKSKAALLKKFSEPLSIEDVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVEAK-QGFRL 59
Query: 65  PRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGE--CGDCRHCRFSI-NGEPVNHFLGT 121
           P I GH                     V+    G+  C  CR  +F+I   + +      
Sbjct: 60  PIILGHENAGTIVEVGELAKVKKGDNVVVYATWGDLTCRYCREGKFNICKNQIIPGQTTN 119
Query: 122 STFSEYTVVHSG-CVAKINPLAPLDKVCILSCGVSTGLGATLN----VAKPERXXXXXXX 176
             FSEY +V S   + K+N L+P++   +   G +T +GA       ++K          
Sbjct: 120 GGFSEYMLVKSSRWLVKLNSLSPVEAAPLADAG-TTSMGAIRQALPFISKFAEPVVIVNG 178
Query: 177 XXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMT 236
                                  + RS K  + A + G  D+V+     +  + +I ++T
Sbjct: 179 IGGLAVYTIQILKALMKNITIVGISRSKKHRDFALELG-ADYVS---EMKDAESLINKLT 234
Query: 237 NG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGT 295
           +G G   +++  G  +   +  + +    G  +LVG+  K          V N++ L   
Sbjct: 235 DGLGASIAIDLVGTEETTYNLGKLLAQE-GAIILVGMEGKRVSLEAFDTAVWNKKLLG-- 291
Query: 296 FFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKG 343
              NY    DL  VV   +++  +++ +I  ++P  +INKAF  + +G
Sbjct: 292 --SNYGSLNDLEDVV--RLSESGKIKPYII-KVPLDDINKAFTNLDEG 334

>pdb|1RJW|A Chain A, Crystal Structure Of Nad(+)-Dependent Alcohol Dehydrogenase From Bacillus Stearothermophilus Strain Lld-R Length = 339

Iteration: 1
 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 93/362 (25%), Positives = 142/362 (39%), Gaps = 44/362 (12%)
Query: 12  KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYF----WESKGQTPLFPRI 67
           KAAV  +  +PL I++VE       EV ++IK   +C TDL+     W  K + PL P  
Sbjct: 2   KAAVVEQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIP-- 59
Query: 68  FGHXXXXXXXXXXXXXXXXXXXXHV-LPVFTGECGDCRHCRFSINGEPV----NHFLGTS 122
            GH                     V +P     CG   HC + ++G+          G S
Sbjct: 60  -GHEGVGIVEEVGPGVTHLKVGDRVGIPWLYSACG---HCDYCLSGQETLCEHQKNAGYS 115
Query: 123 T---FSEYTVVHSGCVAKI-NPLAPLDKVCILSCGVSTGLGATLNVAKPERXXXXXXXXX 178
               ++EY    +  V KI + L+  +   I   GV+T     +  AKP           
Sbjct: 116 VDGGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKALKVTGAKPGEWVAIYGIGG 175
Query: 179 XXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTN- 237
                                VD   ++ E AK+ G    VN      P++E  A+    
Sbjct: 176 LGHVAVQYAKAMGLNVVA---VDIGDEKLELAKELGADLVVN------PLKEDAAKFMKE 226
Query: 238 --GGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI--NVLNERTLK 293
             GGV  +V    +     SA+  +  G G  VLVG+P ++   M  PI   VLN   + 
Sbjct: 227 KVGGVHAAVVTAVSKPAFQSAYNSIRRG-GACVLVGLPPEE---MPIPIFDTVLNGIKII 282
Query: 294 GTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGE-GLRCIISM 352
           G+  G    R DL   +      ++   K I    P  +IN+ F+ M+KG+   R ++++
Sbjct: 283 GSIVGT---RKDLQEALQFAAEGKV---KTIIEVQPLEKINEVFDRMLKGQINGRVVLTL 336
Query: 353 ED 354
           ED
Sbjct: 337 ED 338

>pdb|3PII|A Chain A, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase With Substrate Analogue Butyramide Length = 339

Iteration: 1
 Score = 62.4 bits (150), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 93/362 (25%), Positives = 142/362 (39%), Gaps = 44/362 (12%)
Query: 12  KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYF----WESKGQTPLFPRI 67
           KAAV  +  +PL I++VE       EV ++IK   +C TDL+     W  K + PL P  
Sbjct: 2   KAAVVEQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIP-- 59
Query: 68  FGHXXXXXXXXXXXXXXXXXXXXHV-LPVFTGECGDCRHCRFSINGEPV----NHFLGTS 122
            GH                     V +P     CG   HC + ++G+          G S
Sbjct: 60  -GHEGVGIVEEVGPGVTHLKVGDRVGIPWLYSACG---HCDYCLSGQETLCEHQKNAGYS 115
Query: 123 T---FSEYTVVHSGCVAKI-NPLAPLDKVCILSCGVSTGLGATLNVAKPERXXXXXXXXX 178
               ++EY    +  V KI + L+  +   I   GV+T     +  AKP           
Sbjct: 116 VDGGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKALKVTGAKPGEWVAIYGIGG 175
Query: 179 XXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTN- 237
                                VD   ++ E AK+ G    VN      P++E  A+    
Sbjct: 176 FGHVAVQYAKAMGLNVVA---VDIGDEKLELAKELGADLVVN------PLKEDAAKFMKE 226
Query: 238 --GGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI--NVLNERTLK 293
             GGV  +V    +     SA+  +  G G  VLVG+P ++   M  PI   VLN   + 
Sbjct: 227 KVGGVHAAVVTAVSKPAFQSAYNSIRRG-GACVLVGLPPEE---MPIPIFDTVLNGIKII 282
Query: 294 GTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGE-GLRCIISM 352
           G+  G    R DL   +      ++   K I    P  +IN+ F+ M+KG+   R ++++
Sbjct: 283 GSIVGT---RKDLQEALQFAAEGKV---KTIIEVQPLEKINEVFDRMLKGQINGRVVLTL 336
Query: 353 ED 354
           ED
Sbjct: 337 ED 338

>pdb|3MEQ|A Chain A, Crystal Structure Of Alcohol Dehydrogenase From Brucella Mel Length = 365

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 86/360 (23%), Positives = 125/360 (34%), Gaps = 57/360 (15%)
Query: 10  TCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYF----WESKGQTPLFP 65
           T KAAV    GKPL I +V +  P   ++++ I+ + +C TDL+     W  K   P  P
Sbjct: 25  TMKAAVVRAFGKPLTIDEVPIPQPGPGQIQVAIQASGVCHTDLHAAEGDWPVKPNPPFIP 84
Query: 66  RIFGHXXXXXXXXXXXXXXXXXXXXHV-LPVFTGECGDCRHC--------------RFSI 110
              GH                     V +P     CG CRHC               +S+
Sbjct: 85  ---GHEGVGFVSAVGSGVKHVKEGDRVGIPWLYTACGHCRHCLGGWETLCEEQLNTGYSV 141
Query: 111 NGEPVNHFLGTSTFSEYTVVHSGCVAKI------NPLAPLDKVCILSCGVSTGLGATLNV 164
           NG           F+EY V     V  +      N +AP     +L  GV+   G  +  
Sbjct: 142 NG----------GFAEYVVADPNFVGHLPKNIDFNEIAP-----VLCAGVTVYKGLKVTD 186
Query: 165 AKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNTSEH 224
            KP                                VD   ++ + A++ G T  VN    
Sbjct: 187 TKP---GDWVVISGIGGLGHMAVQYARAMGLNVAAVDIDDRKLDLARRLGATVTVNAKTV 243
Query: 225 DRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI 284
             P   +  E T+GG    +    +      A   V  G G   L G+P  D  F     
Sbjct: 244 ADPAAYIRKE-TDGGAQGVLVTAVSPKAFEQALGMVARG-GTVSLNGLPPGD--FPLSIF 299
Query: 285 N-VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKG 343
           N VLN  T++G+  G    R DL   +D   + ++   K         +IN  F+ M +G
Sbjct: 300 NMVLNGVTVRGSIVGT---RLDLQESLDFAADGKV---KATIQTGKLEDINAIFDDMRQG 353

>pdb|3QE3|A Chain A, Sheep Liver Sorbitol Dehydrogenase Length = 355

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 75/152 (49%), Gaps = 9/152 (5%)
Query: 201 DRSSKRFEEAKKFGVTDFVNTSEHDRP--IQEVIAEMTNGGVDRSVECTGNIDNMISAFE 258
           D S+ R  +AK+ G  DF+    ++ P  I + +  +     + ++ECTG   ++ +   
Sbjct: 202 DLSASRLSKAKEVG-ADFILEISNESPEEIAKKVEGLLGSKPEVTIECTGVETSIQAGIY 260
Query: 259 CVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQL 318
             H G G  VLVG+ S+    MT  + +++  T +    G ++     P  + M  +K +
Sbjct: 261 ATHSG-GTLVLVGLGSE----MTS-VPLVHAATREVDIKGVFRYCNTWPMAISMLASKSV 314
Query: 319 ELEKFITHRIPFSEINKAFEYMVKGEGLRCII 350
            ++  +THR P  +  +AFE   KG GL+ +I
Sbjct: 315 NVKPLVTHRFPLEKALEAFETSKKGLGLKVMI 346

>pdb|2EER|A Chain A, Structural Study Of Project Id St2577 From Sulfolobus Tokodaii Strain7 Length = 347

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 71/339 (20%), Positives = 131/339 (38%), Gaps = 28/339 (8%)
Query: 18  EAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESK-GQTPL-------FPRIFG 69
           E GKPL ++D+ +  P+  +V IKI+   +C +D++  + + G   +        P   G
Sbjct: 8   EIGKPLKLEDIPIPKPKGSQVLIKIEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLG 67
Query: 70  HXXXXXXXXXXXXXXXXXXXXHV-LPVFTGECGDCRHCRFS---INGEPVNHFLGTS--- 122
           H                     V +  + GE G+C +CR     +   P   +LG +   
Sbjct: 68  HEIAGRIEEVGDEVVGYSKGDLVAVNPWEGE-GNCYYCRIGEEHLCDSP--RWLGINYDG 124
Query: 123 TFSEYTVV-HSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERXXXXXXXXXXXX 181
            ++EY +V H   + K+  L+ ++   +   GV+T          P +            
Sbjct: 125 AYAEYVLVPHYKYLYKLRRLSAVEAAPLTCSGVTTYRAVRKASLDPSK-TLVVIGAGGGL 183
Query: 182 XXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVD 241
                             VD   +  E AK+ G    +N S  D P+ E+       G D
Sbjct: 184 GTMAIQIAKAVSGATIIGVDVREEALEAAKRAGADYVINASSQD-PVSEIRRITQGKGAD 242
Query: 242 RSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYK 301
             ++   N +  +S +  V    G  V+VG+   D  +   P+  LNE    G+  GN  
Sbjct: 243 AVIDLN-NSEKTLSIYPYVLAKQGKYVMVGLFGADLKYHA-PLITLNEVQFIGSLVGN-- 298
Query: 302 PRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYM 340
            ++D   +  M + +  +++  +T  +   E N+A + +
Sbjct: 299 -QSDFLGI--MSLAEAGKVKPMVTKTMKLEEANEAIDNL 334

>pdb|1VJ0|A Chain A, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From Thermotoga Maritima At 2.00 A Resolution Length = 380

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 71/156 (45%), Gaps = 10/156 (6%)
Query: 203 SSKRFEEAKKFGVTDFVN---TSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFE 258
           S  R + A++ G    +N   TS  +R  ++ I ++T+G G D  +E TG+   ++   E
Sbjct: 229 SPNRLKLAEEIGADLTLNRRETSVEER--RKAIMDITHGRGADFILEATGDSRALLEGSE 286
Query: 259 CVHDGWGVAVL-VGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQ 317
            +  G   +V  V VP     F      VL   T KG +  +        S+     N Q
Sbjct: 287 LLRRGGFYSVAGVAVPQDPVPFKVYEWLVLKNATFKGIWVSDTSHFVKTVSITSR--NYQ 344
Query: 318 LELEKFITHRIPFSEINKAFEYMVKGEGLRCIISME 353
           L L K ITHR+P  E NKA E M   E L+ I+  E
Sbjct: 345 L-LSKLITHRLPLKEANKALELMESREALKVILYPE 379

>pdb|1LLU|A Chain A, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol Dehydrogenase With Its Coenzyme And Weak Substrate Length = 342

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 80/353 (22%), Positives = 123/353 (34%), Gaps = 43/353 (12%)
Query: 10  TCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIF 68
           T KAAV    G PL I++V+V  P   +V +KI+ + +C TDL+  E      P  P I 
Sbjct: 6   TMKAAVVHAYGAPLRIEEVKVPLPGPGQVLVKIEASGVCHTDLHAAEGDWPVKPPLPFIP 65
Query: 69  GHXXXXXXXXXXXXXXXXXXXXHV-LPVFTGECGDCRHC--------------RFSINGE 113
           GH                     V +P     CG C HC               +S+NG 
Sbjct: 66  GHEGVGYVAAVGSGVTRVKEGDRVGIPWLYTACGCCEHCLTGWETLCESQQNTGYSVNG- 124
Query: 114 PVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVC-ILSCGVSTGLGATLNVAKPERXXX 172
                     ++EY +     V  +       ++  IL  GV+   G     A+P +   
Sbjct: 125 ---------GYAEYVLADPNYVGILPKNVEFAEIAPILCAGVTVYKGLKQTNARPGQ--- 172
Query: 173 XXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVI 232
                                      +D    + E A+K G +  VN  + D P++ + 
Sbjct: 173 WVAISGIGGLGHVAVQYARAMGLHVAAIDIDDAKLELARKLGASLTVNARQED-PVEAIQ 231
Query: 233 AEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERT 291
            ++   G    V  T   ++       +    G   LVG+P  D  F T   + VL    
Sbjct: 232 RDI---GGAHGVLVTAVSNSAFGQAIGMARRGGTIALVGLPPGD--FPTPIFDVVLKGLH 286
Query: 292 LKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGE 344
           + G+  G    R DL   +D        L K   H     +IN+  + M  G+
Sbjct: 287 IAGSIVGT---RADLQEALDFAGEG---LVKATIHPGKLDDINQILDQMRAGQ 333

>pdb|4ILK|A Chain A, Crystal Structure Of Short Chain Alcohol Dehydrogenase (rspb) From E. Coli Cft073 (efi Target Efi-506413) Complexed With Cofactor Nadh Length = 359

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 73/328 (22%), Positives = 113/328 (34%), Gaps = 32/328 (9%)
Query: 23  LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHXXXXXXXXXXXX 82
           L I + E+  P A EVR+K+K   +C +D + +        +PR+ GH            
Sbjct: 32  LSIIEREIPTPSAGEVRVKVKLAGICGSDSHIYRGHNPFAKYPRVIGHEFFGVIDAVGEG 91
Query: 83  XXXXXXXXHVLPVFTGECGDCRHCRFSINGEP-------VNHFLGTSTFSEYTVVHSGCV 135
                    V       CG C  C     G+P       V        FSEY VV +   
Sbjct: 92  VESARVGERVAVDPVVSCGHCYPCSI---GKPNVCTTLAVLGVHADGGFSEYAVVPAKNA 148
Query: 136 AKINPLAPLDKVCILSCGVSTGLGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXX 195
            KI P A  D+  ++    +     T +    E                           
Sbjct: 149 WKI-PEAVADQYAVMIEPFTIAANVTGHGQPTENDTVLVYGAGPIGLTIVQVLKGVYNVK 207
Query: 196 XXXXVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMIS 255
                DR  +R E+AK+ G    +N S+   P+ E  AE       + ++ T  ID    
Sbjct: 208 NVIVADRIDERLEKAKESGADWAINNSQ--TPLGESFAE-------KGIKPTLIIDAA-- 256
Query: 256 AFECVHDGWGVAVLVGVPSKDAVFM---TKPINVLNERTLKGTFFGNYKPRTD---LPSV 309
              C       AV +  P+   V M   ++P  V+ ++ + G     +  R +    P V
Sbjct: 257 ---CHPSILKEAVTLASPAARIVLMGFSSEPSEVI-QQGITGKELSIFSSRLNANKFPVV 312
Query: 310 VDMYMNKQLELEKFITHRIPFSEINKAF 337
           +D      ++ EK ITH   F  +  A 
Sbjct: 313 IDWLSKGLIKPEKLITHTFDFQHVADAI 340

>pdb|1PL7|A Chain A, Human Sorbitol Dehydrogenase (Apo) Length = 356

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 73/156 (46%), Gaps = 17/156 (10%)
Query: 201 DRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGV----DRSVECTGNIDNMISA 256
           D S+ R  +AK+ G  D V     + P QE IA    G +    + ++ECTG   ++ + 
Sbjct: 203 DLSATRLSKAKEIG-ADLVLQISKESP-QE-IARKVEGQLGCKPEVTIECTGAEASIQAG 259
Query: 257 FECVHDGWGVAVLVGVPSKDAVFMTKPI--NVLNERTLKGTFFGNYKPRTDLPSVVDMYM 314
                 G G  VLVG+ S+     T P+    + E  +KG F    +     P  + M  
Sbjct: 260 IYATRSG-GTLVLVGLGSE---MTTVPLLHAAIREVDIKGVF----RYCNTWPVAISMLA 311
Query: 315 NKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCII 350
           +K + ++  +THR P  +  +AFE   KG GL+ ++
Sbjct: 312 SKSVNVKPLVTHRFPLEKALEAFETFKKGLGLKIML 347

>pdb|1R37|A Chain A, Alcohol Dehydrogenase From Sulfolobus Solfataricus Complexed With Nad(H) And 2-Ethoxyethanol Length = 347

Iteration: 1
 Score = 48.1 bits (113), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 70/339 (20%), Positives = 131/339 (38%), Gaps = 28/339 (8%)
Query: 18  EAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESK-GQTPL-------FPRIFG 69
           E GKPL +Q++ V  P+  +V IK++   +C +D++  + + G   +        P   G
Sbjct: 8   EIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLG 67
Query: 70  HXXXXXXXXXXXXXXXXXXXXHV-LPVFTGECGDCRHCRFS---INGEPVNHFLGTS--- 122
           H                     V +  + GE G+C +CR     +   P   +LG +   
Sbjct: 68  HEIAGKIEEVGDEVVGYSKGDLVAVNPWQGE-GNCYYCRIGEEHLCDSP--RWLGINFDG 124
Query: 123 TFSEYTVV-HSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERXXXXXXXXXXXX 181
            ++EY +V H   + K+  L  ++   +   G++T          P +            
Sbjct: 125 AYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTK-TLLVVGAGGGL 183
Query: 182 XXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVD 241
                             VD   +  E AK+ G    +N S  D P+ E+     + GVD
Sbjct: 184 GTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQD-PLAEIRRITESKGVD 242
Query: 242 RSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYK 301
             ++   N +  +S +       G  V+VG+   D  +   P+  L+E    G+  GN  
Sbjct: 243 AVIDLN-NSEKTLSVYPKALAKQGKYVMVGLFGADLHYHA-PLITLSEIQFVGSLVGN-- 298
Query: 302 PRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYM 340
            ++D   +  M + +  +++  IT  +   E N+A + +
Sbjct: 299 -QSDFLGI--MRLAEAGKVKPMITKTMKLEEANEAIDNL 334

>pdb|2DQ4|A Chain A, Crystal Structure Of Threonine 3-Dehydrogenase Length = 343

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 81/353 (22%), Positives = 132/353 (37%), Gaps = 51/353 (14%)
Query: 23  LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWE----SKGQTPLFPRIFGHXXXXXXXX 78
           L + D  V  P   E+ ++++  S+C TDL+ W+    ++G+    P + GH        
Sbjct: 13  LTLVDRPVPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRI-RPPLVTGHEFSGVVEA 71
Query: 79  XXXXXXXXXXXXHVLPVFTGECGDCRHCRFSINGEPVN-HFLGT---STFSEYTVVHSGC 134
                       HV       C  C  CR       +N   LG      F+EY VV +  
Sbjct: 72  VGPGVRRPQVGDHVSLESHIVCHACPACRTGNYHVCLNTQILGVDRDGGFAEYVVVPAEN 131
Query: 135 VAKINPL-APLDKVCIL------------SCGVSTGLGATLNVAKPERXXXXXXXXXXXX 181
            A +NP   P +   IL              GVS G    +  A P              
Sbjct: 132 -AWVNPKDLPFEVAAILEPFGNAVHTVYAGSGVS-GKSVLITGAGP-------------I 176
Query: 182 XXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVD 241
                              D +  R   A+ +     VN  E D  + EV+  +T  GV+
Sbjct: 177 GLMAAMVVRASGAGPILVSDPNPYRLAFARPY-ADRLVNPLEED--LLEVVRRVTGSGVE 233
Query: 242 RSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKG-TFFGNY 300
             +E +GN   +      +  G G A ++G+PS    F     ++  E  ++G T FG  
Sbjct: 234 VLLEFSGNEAAIHQGLMALIPG-GEARILGIPSDPIRF-----DLAGELVMRGITAFGIA 287
Query: 301 KPR---TDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCII 350
             R   T +     +Y + +++L   +THR+P S   +AF  +  G+ ++ I+
Sbjct: 288 GRRLWQTWMQGTALVY-SGRVDLSPLLTHRLPLSRYREAFGLLASGQAVKVIL 339

>pdb|1NTO|A Chain A, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon Sulfolobus Solfataricus-Monoclinic Crystal Form Length = 347

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 69/339 (20%), Positives = 131/339 (38%), Gaps = 28/339 (8%)
Query: 18  EAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESK-GQTPL-------FPRIFG 69
           E GKPL +Q++ V  P+  +V IK++   +C +D++  + + G   +        P   G
Sbjct: 8   EIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLG 67
Query: 70  HXXXXXXXXXXXXXXXXXXXXHV-LPVFTGECGDCRHCRFS---INGEPVNHFLGTS--- 122
           H                     V +  + GE G+C +CR     +   P   +LG +   
Sbjct: 68  HEIAGKIEEVGDEVVGYSKGDLVAVNPWQGE-GNCYYCRIGEEHLCDSP--RWLGINFDG 124
Query: 123 TFSEYTVV-HSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERXXXXXXXXXXXX 181
            ++EY +V H   + K+  L  ++   +   G++T          P +            
Sbjct: 125 AYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTK-TLLVVGAGGGL 183
Query: 182 XXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVD 241
                             VD   +  E AK+ G    +N S  D P+ E+     + GVD
Sbjct: 184 GTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQD-PLAEIRRITESKGVD 242
Query: 242 RSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYK 301
             ++   + +  +S +       G  V+VG+   D  +   P+  L+E    G+  GN  
Sbjct: 243 AVIDLNYS-EKTLSVYPKALAKQGKYVMVGLFGADLHYHA-PLITLSEIQFVGSLVGN-- 298
Query: 302 PRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYM 340
            ++D   +  M + +  +++  IT  +   E N+A + +
Sbjct: 299 -QSDFLGI--MRLAEAGKVKPMITKTMKLEEANEAIDNL 334

>pdb|3I4C|A Chain A, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh) Double Mutant (W95l,N249y) Length = 347

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 69/339 (20%), Positives = 130/339 (38%), Gaps = 28/339 (8%)
Query: 18  EAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESK-GQTPL-------FPRIFG 69
           E GKPL +Q++ V  P+  +V IK++   +C +D++  + + G   +        P   G
Sbjct: 8   EIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLG 67
Query: 70  HXXXXXXXXXXXXXXXXXXXXHV-LPVFTGECGDCRHCRFS---INGEPVNHFLGTS--- 122
           H                     V +    GE G+C +CR     +   P   +LG +   
Sbjct: 68  HEIAGKIEEVGDEVVGYSKGDLVAVNPLQGE-GNCYYCRIGEEHLCDSP--RWLGINFDG 124
Query: 123 TFSEYTVV-HSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERXXXXXXXXXXXX 181
            ++EY +V H   + K+  L  ++   +   G++T          P +            
Sbjct: 125 AYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTK-TLLVVGAGGGL 183
Query: 182 XXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVD 241
                             VD   +  E AK+ G    +N S  D P+ E+     + GVD
Sbjct: 184 GTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQD-PLAEIRRITESKGVD 242
Query: 242 RSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYK 301
             ++   + +  +S +       G  V+VG+   D  +   P+  L+E    G+  GN  
Sbjct: 243 AVIDLNYS-EKTLSVYPKALAKQGKYVMVGLFGADLHYHA-PLITLSEIQFVGSLVGN-- 298
Query: 302 PRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYM 340
            ++D   +  M + +  +++  IT  +   E N+A + +
Sbjct: 299 -QSDFLGI--MRLAEAGKVKPMITKTMKLEEANEAIDNL 334

>pdb|2HCY|A Chain A, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae Fermentative Enzyme Length = 347

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 65/342 (19%), Positives = 123/342 (35%), Gaps = 17/342 (4%)
Query: 10  TCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL-FPRIF 68
           T K  + +E+   L  +D+ V  P+A E+ I +KY+ +C TDL+ W      P+  P + 
Sbjct: 5   TQKGVIFYESHGKLEYKDIPVPKPKANELLINVKYSGVCHTDLHAWHGDWPLPVKLPLVG 64
Query: 69  GHXXXXXXXXXXXXXXXXXXXXHV-LPVFTGECGDCRHCRFSINGE----PVNHFLGTST 123
           GH                    +  +    G C  C +C            ++ +    +
Sbjct: 65  GHEGAGVVVGMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADLSGYTHDGS 124
Query: 124 FSEYTVVHSGCVAKINPLAPLDKVC-ILSCGVSTGLGATLNVAKPERXXXXXXXXXXXXX 182
           F +Y    +   A I     L +V  IL  G++  +   L  A                 
Sbjct: 125 FQQYATADAVQAAHIPQGTDLAQVAPILCAGIT--VYKALKSANLMAGHWVAISGAAGGL 182
Query: 183 XXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDR 242
                            +D    + E  +  G   F++ ++ ++ I   + + T+GG   
Sbjct: 183 GSLAVQYAKAMGYRVLGIDGGEGKEELFRSIGGEVFIDFTK-EKDIVGAVLKATDGGAHG 241
Query: 243 SVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKP 302
            +  + +   + ++   V    G  VLVG+P+           V+   ++ G++ GN   
Sbjct: 242 VINVSVSEAAIEASTRYVRAN-GTTVLVGMPAGAKCCSDVFNQVVKSISIVGSYVGN--- 297
Query: 303 RTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGE 344
           R D    +D +      L K     +  S + + +E M KG+
Sbjct: 298 RADTREALDFFARG---LVKSPIKVVGLSTLPEIYEKMEKGQ 336

>pdb|3S1L|A Chain A, Crystal Structure Of Apo-Form Furx Length = 340

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 41/100 (41%), Gaps = 8/100 (8%)
Query: 12  KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYF----WESKGQTPLFPRI 67
           KAAV    G PL I +V V  P   +V++KI+ + +C TDL+     W  K   P  P I
Sbjct: 4   KAAVVRAFGAPLTIDEVPVPQPGPGQVQVKIEASGVCHTDLHAADGDWPVK---PTLPFI 60
Query: 68  FGHXXXXXXXXXXXXXXXXXXXXHV-LPVFTGECGDCRHC 106
            GH                     V +P     CG C HC
Sbjct: 61  PGHEGVGYVSAVGSGVSRVKEGDRVGVPWLYSACGYCEHC 100

>pdb|1PL6|A Chain A, Human SdhNADHINHIBITOR COMPLEX Length = 356

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 70/153 (45%), Gaps = 17/153 (11%)
Query: 201 DRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGV----DRSVECTGNIDNMISA 256
           D S+ R  +AK+ G  D V     + P QE IA    G +    + ++ECTG   ++ + 
Sbjct: 203 DLSATRLSKAKEIG-ADLVLQISKESP-QE-IARKVEGQLGCKPEVTIECTGAEASIQAG 259
Query: 257 FECVHDGWGVAVLVGVPSKDAVFMTKPI--NVLNERTLKGTFFGNYKPRTDLPSVVDMYM 314
                 G G  VLVG+ S+     T P+    + E  +KG F    +     P  +    
Sbjct: 260 IYATRSG-GTLVLVGLGSEX---TTVPLLHAAIREVDIKGVF----RYCNTWPVAISXLA 311
Query: 315 NKQLELEKFITHRIPFSEINKAFEYMVKGEGLR 347
           +K + ++  +THR P  +  +AFE   KG GL+
Sbjct: 312 SKSVNVKPLVTHRFPLEKALEAFETFKKGLGLK 344

>pdb|1YKF|A Chain A, Nadp-Dependent Alcohol Dehydrogenase From Thermoanaerobium Brockii Length = 352

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 63/138 (45%), Gaps = 10/138 (7%)
Query: 208 EEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGV 266
           + AK +G TD VN    D PI+  I  +T G GVD ++   GN D M +A + V  G G 
Sbjct: 205 DAAKYYGATDIVNYK--DGPIESQIMNLTEGKGVDAAIIAGGNADIMATAVKIVKPG-GT 261
Query: 267 AVLVGVPSKDAVFMTKPINV---LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKF 323
              V    +  V     +     +  +T+KG      + R +   ++D+   K+++  K 
Sbjct: 262 IANVNYFGEGEVLPVPRLEWGCGMAHKTIKGGLCPGGRLRME--RLIDLVFYKRVDPSKL 319
Query: 324 ITHRI-PFSEINKAFEYM 340
           +TH    F  I KAF  M
Sbjct: 320 VTHVFRGFDNIEKAFMLM 337

>pdb|2DFV|A Chain A, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus Horikoshii Length = 347

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 77/345 (22%), Positives = 128/345 (37%), Gaps = 35/345 (10%)
Query: 27  DVEVAPPQAMEVRIKIKYTSLCRTDL--YFWESKGQTPLF-PRIFGHXXXXXXXXXXXXX 83
           +V+V  P   EV IK+  TS+C TDL  Y W    Q+ +  P+I GH             
Sbjct: 20  EVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIXGHEVAGEVVEIGPGV 79
Query: 84  XXXXXXXHV---LPVFTGECGDCRHCRFSINGEPVNHFLGTST---FSEYTVVHSGCVAK 137
                  +V     +  G+C  CR  ++ +         G  T   F+EY VV +  + K
Sbjct: 80  EGIEVGDYVSVETHIVCGKCYACRRGQYHVCQN--TKIFGVDTDGVFAEYAVVPAQNIWK 137
Query: 138 INPLAPLDKVCILSCGVSTGLGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXX 197
            NP +   +   L   +   +   L  A P                              
Sbjct: 138 -NPKSIPPEYATLQEPLGNAVDTVL--AGPISGKSVLITGAGPLGLLGIAVAKASGAYPV 194
Query: 198 XXVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISA 256
              + S  R E AKK G    +N  E D  + + + ++T+G GVD  +E +G    +   
Sbjct: 195 IVSEPSDFRRELAKKVGADYVINPFEED--VVKEVXDITDGNGVDVFLEFSGAPKALEQG 252
Query: 257 FECVHDGWGVAVLVGVPSKDA-------VFMTKPINVLNERTLKGTFFGNYKPRTDLPSV 309
            + V     V++L   P K         +F    I  +  R L  T++          +V
Sbjct: 253 LQAVTPAGRVSLLGLYPGKVTIDFNNLIIFKALTIYGITGRHLWETWY----------TV 302
Query: 310 VDMYMNKQLELEKFITHRIP-FSEINKAFEYMVKGEGLRCIISME 353
             +  + +L L+  ITH+   F +  +AFE    G+  + +  ++
Sbjct: 303 SRLLQSGKLNLDPIITHKYKGFDKYEEAFELXRAGKTGKVVFXLK 347

>pdb|2D8A|A Chain A, Crystal Structure Of Ph0655 From Pyrococcus Horikoshii Ot3 Length = 348

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 77/345 (22%), Positives = 128/345 (37%), Gaps = 35/345 (10%)
Query: 27  DVEVAPPQAMEVRIKIKYTSLCRTDL--YFWESKGQTPLF-PRIFGHXXXXXXXXXXXXX 83
           +V+V  P   EV IK+  TS+C TDL  Y W    Q+ +  P+I GH             
Sbjct: 21  EVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIXGHEVAGEVVEIGPGV 80
Query: 84  XXXXXXXHV---LPVFTGECGDCRHCRFSINGEPVNHFLGTST---FSEYTVVHSGCVAK 137
                  +V     +  G+C  CR  ++ +         G  T   F+EY VV +  + K
Sbjct: 81  EGIEVGDYVSVETHIVCGKCYACRRGQYHVCQN--TKIFGVDTDGVFAEYAVVPAQNIWK 138
Query: 138 INPLAPLDKVCILSCGVSTGLGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXX 197
            NP +   +   L   +   +   L  A P                              
Sbjct: 139 -NPKSIPPEYATLQEPLGNAVDTVL--AGPISGKSVLITGAGPLGLLGIAVAKASGAYPV 195
Query: 198 XXVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISA 256
              + S  R E AKK G    +N  E D  + + + ++T+G GVD  +E +G    +   
Sbjct: 196 IVSEPSDFRRELAKKVGADYVINPFEED--VVKEVXDITDGNGVDVFLEFSGAPKALEQG 253
Query: 257 FECVHDGWGVAVLVGVPSKDA-------VFMTKPINVLNERTLKGTFFGNYKPRTDLPSV 309
            + V     V++L   P K         +F    I  +  R L  T++          +V
Sbjct: 254 LQAVTPAGRVSLLGLYPGKVTIDFNNLIIFKALTIYGITGRHLWETWY----------TV 303
Query: 310 VDMYMNKQLELEKFITHRIP-FSEINKAFEYMVKGEGLRCIISME 353
             +  + +L L+  ITH+   F +  +AFE    G+  + +  ++
Sbjct: 304 SRLLQSGKLNLDPIITHKYKGFDKYEEAFELXRAGKTGKVVFXLK 348

>pdb|2NVB|A Chain A, Contribution Of Pro275 To The Thermostability Of The Alcohol Dehydrogenases (Adhs) Length = 352

Iteration: 1
 Score = 44.7 bits (104), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 63/138 (45%), Gaps = 10/138 (7%)
Query: 208 EEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGV 266
           + AK +G TD VN    D PI+  I  +T G GVD ++   GN D M +A + V  G G 
Sbjct: 205 DAAKYYGATDIVNYK--DGPIESQIMNLTEGKGVDAAIIAGGNADIMATAVKIVKPG-GT 261
Query: 267 AVLVGVPSKDAVFMTKPINV---LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKF 323
              V    +  V     +     +  +T+KG      + R +   ++D+   K+++  K 
Sbjct: 262 IANVNYFGEGEVLDVPRLEWGCGMAHKTIKGGLCPGGRLRME--RLIDLVFYKRVDPSKL 319
Query: 324 ITHRI-PFSEINKAFEYM 340
           +TH    F  I KAF  M
Sbjct: 320 VTHVFRGFDNIEKAFMLM 337

>pdb|3GFB|A Chain A, L-Threonine Dehydrogenase (Tktdh) From The Hyperthermophilic Archaeon Thermococcus Kodakaraensis Length = 350

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 72/333 (21%), Positives = 121/333 (36%), Gaps = 29/333 (8%)
Query: 27  DVEVAPPQAMEVRIKIKYTSLCRTDL--YFWESKGQTPLF-PRIFGHXXXXXXXXXXXXX 83
           +V+V  P   EV IK+  TS+C TDL  Y W    Q+ +  P+I GH             
Sbjct: 21  EVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIMGHEVAGEVVEVGPGV 80
Query: 84  XXXXXXXHV---LPVFTGECGDCRHCRFSI-NGEPVNHFLGTSTFSEYTVVHSGCVAKIN 139
                  ++     +  G+C  C+H R+ +     +        F+ Y +V +    K N
Sbjct: 81  EDLQVGDYISVETHIVCGKCYACKHNRYHVCQNTKIFGVDMDGVFAHYAIVPAKNAWK-N 139
Query: 140 PLAPLDKVCILSCGVSTGLGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 199
           P     +   L   +   +   L  A P                                
Sbjct: 140 PKDMPPEYAALQEPLGNAVDTVL--AGPIAGRSTLITGAGPLGLLGIAVAKASGAYPVIV 197
Query: 200 VDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFEC 259
            + S  R + AKK G    VN  E D P++ V+      GV+  +E +G    +    + 
Sbjct: 198 SEPSEFRRKLAKKVGADYVVNPFEED-PVKFVMDITDGAGVEVFLEFSGAPKALEQGLKA 256
Query: 260 VHDGWGVAVLVGVPSKDA-------VFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDM 312
           V  G  V++L   P +         +F    ++ +  R L  T++          +V  +
Sbjct: 257 VTPGGRVSLLGLFPREVTIDFNNLIIFKALEVHGITGRHLWETWY----------TVSSL 306
Query: 313 YMNKQLELEKFITHRIP-FSEINKAFEYMVKGE 344
             + +L L+  ITH+   F +  +AFE M  G+
Sbjct: 307 IQSGKLNLDPIITHKYKGFDKFEEAFELMRAGK 339

>pdb|3FPL|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The Cofactor Binding Domain Res 153-295 Of C. Beijerinckii Adh By T. Brockii Adh Length = 351

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 63/138 (45%), Gaps = 10/138 (7%)
Query: 208 EEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGV 266
           + AK +G TD VN    D PI+  I  +T G GVD ++   GN D M +A + V  G G 
Sbjct: 205 DAAKYYGATDIVNYK--DGPIESQIMNLTEGKGVDAAIIAGGNADIMATAVKIVKPG-GT 261
Query: 267 AVLVGVPSKDAVFMTKPINV---LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKF 323
              V    +  V     +     +  +T+KG      + R ++  + DM +  +++L K 
Sbjct: 262 IANVNYFGEGEVLPVPRLEWGCGMAHKTIKGGLCPGGRLRAEM--LRDMVVYNRVDLSKL 319
Query: 324 ITHRI-PFSEINKAFEYM 340
           +TH    F  I +A   M
Sbjct: 320 VTHVYHGFDHIEEALLLM 337

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	354
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	0.0
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	0.0
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	0.0
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	0.0
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	0.0
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	1e-175
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	1e-156
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	2e-85
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	2e-76
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	2e-76
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	4e-75
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	4e-74
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	4e-74
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	4e-68
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	4e-68
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	6e-68
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	6e-66
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	9e-65
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	9e-63
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	5e-61
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	6e-58
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	2e-57
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	6e-54
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	1e-53
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	1e-53
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	5e-46
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	2e-45
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	2e-34
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	9e-34
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	9e-34
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	3e-33
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	3e-31
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	7e-31
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	2e-29
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	2e-29
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	6e-28
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	9e-28
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	5e-27
3gms_A	340	Putative NADPH:quinone reductase; structural genom	6e-26
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	7e-24
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	5e-22
4eye_A	342	Probable oxidoreductase; structural genomics, niai	6e-21
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	1e-20
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	1e-19
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	1e-19
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	4e-19
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	8e-19
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	8e-19
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	2e-18
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	8e-18
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	9e-18
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	6e-16
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	8e-16
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	9e-16
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	3e-15
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	6e-14
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	1e-13
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	2e-13
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	3e-13
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	7e-12
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	8e-06
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	6e-04
1c1d_A	355	L-phenylalanine dehydrogenase; amino acid dehydrog	9e-04

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A* Length = 373

 Score =  596 bits (1540), Expect = 0.0
 Identities = 184/373 (49%), Positives = 246/373 (65%), Gaps = 25/373 (6%)

Query: 5   AGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLF 64
           A  ++ CKAAVAWEAGKPL I+++EVAPP+A EVRIKI  T++C TD Y          F
Sbjct: 1   ANEVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCF 60

Query: 65  PRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHC------------------ 106
           P I GH  AG+VESVGEGV+ L+ GD V+P++  +CG+C+ C                  
Sbjct: 61  PVILGHLGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG 120

Query: 107 -------RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLG 159
                  RF+  G+ + H++GTSTFSEYTVV    VAKI+PLAPLDKVC+L CG+STG G
Sbjct: 121 LMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYG 180

Query: 160 ATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFV 219
           A +N AK E GS  AVFGLG VGLA   G ++AGASRIIGVD +  +F  AK+FG T+ +
Sbjct: 181 AAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECI 240

Query: 220 NTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVF 279
           N  +  +PIQEV+ EMT+GGVD S EC GN+  M +A E  H GWGV+V+VGV +     
Sbjct: 241 NPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEI 300

Query: 280 MTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEY 339
            T+P  ++  RT KGT FG +K    +P +V  YM+K++++++F+TH + F EINKAFE 
Sbjct: 301 ATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINKAFEL 360

Query: 340 MVKGEGLRCIISM 352
           M  G+ +R ++ +
Sbjct: 361 MHSGKSIRTVVKI 373

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ... Length = 374

 Score =  589 bits (1522), Expect = 0.0
 Identities = 173/373 (46%), Positives = 240/373 (64%), Gaps = 26/373 (6%)

Query: 3   STAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTP 62
           STAG ++ CKAAV WE  KP  I++VEVAPP+A EVRIK+  T +CR+D +       TP
Sbjct: 1   STAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTP 60

Query: 63  LFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHC---------------- 106
             P I GHEAAG+VES+GEGV+ +  GD V+P+FT +CG CR C                
Sbjct: 61  -LPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMP 119

Query: 107 ---------RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTG 157
                    RF+  G+P++HFLGTSTFS+YTVV    VAKI+  +PL+KVC++ CG STG
Sbjct: 120 RGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTG 179

Query: 158 LGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD 217
            G+ + VAK  +GS+ AVFGLG VGL+   G + AGA+RIIGVD +  +F +AK+ G T+
Sbjct: 180 YGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE 239

Query: 218 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA 277
            VN  ++ +PIQEV+ EM+NGGVD S E  G +D M++A  C  + +GV+V+VGVP    
Sbjct: 240 CVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQ 299

Query: 278 VFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAF 337
                P+ +L+ RT KG  FG +K +  +P +V  +M K+  L+  ITH +PF +IN+ F
Sbjct: 300 NLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGF 359

Query: 338 EYMVKGEGLRCII 350
           + +  GE +R I+
Sbjct: 360 DLLRSGESIRTIL 372

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A* Length = 376

 Score =  588 bits (1519), Expect = 0.0
 Identities = 152/376 (40%), Positives = 229/376 (60%), Gaps = 32/376 (8%)

Query: 4   TAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL 63
           T G ++ CKAA+AW+ G PL I+++EV+PP+A EVRI++  T +C TD+   + K +  L
Sbjct: 2   TQGKVIKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPK-KKAL 60

Query: 64  FPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHC----------------- 106
           FP + GHE AG+VESVG GV++ + GD V+P F  +C  C+ C                 
Sbjct: 61  FPVVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYP 120

Query: 107 ------------RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGV 154
                       RF+  G  + HF+G S+FS+YTVV    +A+++  A L++VC++ CG 
Sbjct: 121 TIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARVDDEANLERVCLIGCGF 180

Query: 155 STGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG 214
           S+G GA +N AK   GS+ AVFGLG VGL+A  G +IAGASRII +D + ++F +AK  G
Sbjct: 181 SSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALG 240

Query: 215 VTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 274
            TD +N  E D+P+Q+VI E+T GGVD S++C G    + +A +C   GWG   +VG   
Sbjct: 241 ATDCLNPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKV 300

Query: 275 KDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEIN 334
            +       ++V+  R++ GTFFG +K    +P++V  Y NK+ +L+  +TH +PF  IN
Sbjct: 301 DE--MTIPTVDVILGRSINGTFFGGWKSVDSVPNLVSDYKNKKFDLDLLVTHALPFESIN 358

Query: 335 KAFEYMVKGEGLRCII 350
            A + M +G+ +R I+
Sbjct: 359 DAIDLMKEGKSIRTIL 374

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A* Length = 373

 Score =  582 bits (1502), Expect = 0.0
 Identities = 161/373 (43%), Positives = 231/373 (61%), Gaps = 28/373 (7%)

Query: 3   STAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTP 62
            TAG  +TCKAAVAWE  KPL ++ + VAPP+A EVRIKI  + +C +D    +    + 
Sbjct: 2   CTAGKDITCKAAVAWEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIPSK 61

Query: 63  LFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHC---------------- 106
            FP I GHEA GVVES+G GV+ ++ GD V+P+F  +CG CR C                
Sbjct: 62  -FPVILGHEAVGVVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAK 120

Query: 107 ---------RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTG 157
                    RF+  G+P+ + +GTSTF+EYTVV    VAKI+P APL+  C++ CG +TG
Sbjct: 121 TGLMADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKAPLES-CLIGCGFATG 179

Query: 158 LGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD 217
            GA +N AK   GS+ AVFGLG VG +A  G + AGASRIIGV     +F +A + G T+
Sbjct: 180 YGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATE 239

Query: 218 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA 277
            +N  ++D+PI EVI E TNGGVD +VEC G I+ M++A +  + G GV V++G+ S + 
Sbjct: 240 CLNPKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNE 299

Query: 278 VFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAF 337
                P+ +L  R+LKG+ FG +K   ++  +VD YM K++ +   ++ ++   +INKAF
Sbjct: 300 RLPLDPLLLLTGRSLKGSVFGGFKGE-EVSRLVDDYMKKKINVNFLVSTKLTLDQINKAF 358

Query: 338 EYMVKGEGLRCII 350
           E +  G+G+R I+
Sbjct: 359 ELLSSGQGVRSIM 371

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1 Length = 374

 Score =  582 bits (1502), Expect = 0.0
 Identities = 182/375 (48%), Positives = 244/375 (65%), Gaps = 26/375 (6%)

Query: 3   STAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTP 62
           +T G ++ CKAAVAWEA KPL+I+++EV  P A E+RIKI  T +C TDLY         
Sbjct: 1   ATVGKVIKCKAAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKD 60

Query: 63  LFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHC---------------- 106
            FP + GHE AG+VESVG GV++ + G+ V+P+F  +CG+CR C                
Sbjct: 61  GFPVVLGHEGAGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANES 120

Query: 107 ---------RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTG 157
                    RF+  G  V  FLGTSTFS+YTVV+   VAKI+P APLD VC+L CGVSTG
Sbjct: 121 PDVMSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSAPLDTVCLLGCGVSTG 180

Query: 158 LGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD 217
            GA +N AK E GS+ AVFGLGAVGLAA  G   AGA RII VD +  +FE+AK FG TD
Sbjct: 181 FGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATD 240

Query: 218 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA 277
           FVN ++H  PI +V+++MTNGGVD S+EC GN+  M +A E    GWGV+VLVG      
Sbjct: 241 FVNPNDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLHD 300

Query: 278 VFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAF 337
           V  T+PI ++  RT KG+ FG +K +  +P +V  Y++K+++L++FITHR+P   +N A 
Sbjct: 301 V-ATRPIQLIAGRTWKGSMFGGFKGKDGVPKMVKAYLDKKVKLDEFITHRMPLESVNDAI 359

Query: 338 EYMVKGEGLRCIISM 352
           + M  G+ +R ++S+
Sbjct: 360 DLMKHGKCIRTVLSL 374

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1 Length = 371

 Score =  489 bits (1261), Expect = e-175
 Identities = 108/371 (29%), Positives = 173/371 (46%), Gaps = 34/371 (9%)

Query: 10  TCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFG 69
              AAV    G    +Q +++  PQ  EV +K+  T +C TDL   + K   P  P + G
Sbjct: 6   DIIAAVTPCKGADFELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYPVP-LPAVLG 64

Query: 70  HEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHC----------------------- 106
           HE +G++E++G  V++L+VGDHV+  +   CG C  C                       
Sbjct: 65  HEGSGIIEAIGPNVTELQVGDHVVLSYG-YCGKCTQCNTGNPAYCSEFFGRNFSGADSEG 123

Query: 107 --RFSINGEPV--NHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATL 162
                 + + V  +HF   S+F+ Y +       K+    P++ +  L CG+ TG GA +
Sbjct: 124 NHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKDVPIELLGPLGCGIQTGAGACI 183

Query: 163 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS 222
           N  K    SS   +G GAVGL+A   A++ GAS II VD    R E AK+ G T  +N+ 
Sbjct: 184 NALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINSK 243

Query: 223 EHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTK 282
             D      I E+T+GGV+ ++E TG+ + +    + +    G   +VG P         
Sbjct: 244 TQD--PVAAIKEITDGGVNFALESTGSPEILKQGVDALGIL-GKIAVVGAPQLGTTAQFD 300

Query: 283 PINVL-NERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMV 341
             ++L   +T+ G   G+  P+  +P +V +Y   +   ++ +     F EIN+A     
Sbjct: 301 VNDLLLGGKTILGVVEGSGSPKKFIPELVRLYQQGKFPFDQLVKF-YAFDEINQAAIDSR 359

Query: 342 KGEGLRCIISM 352
           KG  L+ II +
Sbjct: 360 KGITLKPIIKI 370

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1 Length = 380

 Score =  442 bits (1139), Expect = e-156
 Identities = 91/369 (24%), Positives = 148/369 (40%), Gaps = 31/369 (8%)

Query: 10  TCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFG 69
              A V  +  +PL+ ++ E++      + ++I    +C +D++ +  +      P I G
Sbjct: 17  KAHAMVLEKFNQPLVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPRVPLPIILG 76

Query: 70  HEAAGVVESVGEGVSD-----LEVGDHVLPVFTGECGDCRHCR---------------FS 109
           HE AG V  V     D     L+ GD ++      CG+C  C+                +
Sbjct: 77  HEGAGRVVEVNGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGIN 136

Query: 110 INGEPVNHFLGTSTFSEYTVVHSG-CVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPE 168
                  H  G   +S + V+     V K++    LD + +  C  +T   A     +  
Sbjct: 137 RGCSEYPHLRGC--YSSHIVLDPETDVLKVSEKDDLDVLAMAMCSGATAYHAFDEYPESF 194

Query: 169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDR-P 227
            G +V + G G +GL     AR  GA  +I +  S  R + A++ G    +N  E     
Sbjct: 195 AGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNRRETSVEE 254

Query: 228 IQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV 286
            ++ I ++T+G G D  +E TG+   ++   E +  G G   + GV          P  V
Sbjct: 255 RRKAIMDITHGRGADFILEATGDSRALLEGSELLRRG-GFYSVAGVAVPQDPV---PFKV 310

Query: 287 LNERTLKG-TFFGNY-KPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGE 344
                LK  TF G +    +     V +       L K ITHR+P  E NKA E M   E
Sbjct: 311 YEWLVLKNATFKGIWVSDTSHFVKTVSITSRNYQLLSKLITHRLPLKEANKALELMESRE 370

Query: 345 GLRCIISME 353
            L+ I+  E
Sbjct: 371 ALKVILYPE 379

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A* Length = 345

 Score =  261 bits (668), Expect = 2e-85
 Identities = 75/348 (21%), Positives = 130/348 (37%), Gaps = 28/348 (8%)

Query: 12  KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWE--SKGQTPLFPRIFG 69
           KA    E G   ++ D+    P   E+ +K+    LC +D++  +  +       P   G
Sbjct: 2   KAVQYTEIGSEPVVVDIPTPTPGPGEILLKVTAAGLCHSDIFVMDMPAAQYAYGLPLTLG 61

Query: 70  HEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCR---------FSINGEPVNHFLG 120
           HE  G V  +GEGV+   VGD V       CG C  C           +  G        
Sbjct: 62  HEGVGTVAELGEGVTGFGVGDAVAVYGPWGCGACHACARGRENYCTRAADLGITPPGLGS 121

Query: 121 TSTFSEYTVVHSGCVAKINP-LAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLG 179
             + +EY +V S         L P+    +   G++     +  +     GS+  V G+G
Sbjct: 122 PGSMAEYMIVDSARHLVPIGDLDPVAAAPLTDAGLTPYHAISRVLPLLGPGSTAVVIGVG 181

Query: 180 AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG- 238
            +G    +  R   A+R+I VD    R   A++ G    V +        + I E+T G 
Sbjct: 182 GLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVKSGAG---AADAIRELTGGQ 238

Query: 239 GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN--VLNERTLKGTF 296
           G     +  G    + +A + V    G   +VG+ +       K     +    ++   +
Sbjct: 239 GATAVFDFVGAQSTIDTAQQVVAVD-GHISVVGIHAGA---HAKVGFFMIPFGASVVTPY 294

Query: 297 FGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGE 344
           +G    R++L  VV +    +L++    T      E   A+  + +G 
Sbjct: 295 WGT---RSELMEVVALARAGRLDI---HTETFTLDEGPAAYRRLREGS 336

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* Length = 343

 Score =  237 bits (608), Expect = 2e-76
 Identities = 94/357 (26%), Positives = 151/357 (42%), Gaps = 37/357 (10%)

Query: 12  KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDL--YFWESKGQTPL-FPRIF 68
           +A       + L + D  V  P   E+ ++++  S+C TDL  + W++  +  +  P + 
Sbjct: 2   RALAKLAPEEGLTLVDRPVPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRPPLVT 61

Query: 69  GHEAAGVVESVGEGVSDLEVGDHVLPVFTGE----CGDCRHCRFSINGEPVNH-----FL 119
           GHE +GVVE+VG GV   +VGDHV    + E    C  C  CR    G   +       L
Sbjct: 62  GHEFSGVVEAVGPGVRRPQVGDHV----SLESHIVCHACPACR---TGNY-HVCLNTQIL 113

Query: 120 GTS---TFSEYTVVHSGCVAKINPLAPLDKVCI---LSCGVSTGLGATLNVAKPERGSSV 173
           G      F+EY VV +          P +   I       V      T+       G SV
Sbjct: 114 GVDRDGGFAEYVVVPAENAWVNPKDLPFEVAAILEPFGNAV-----HTVYAGSGVSGKSV 168

Query: 174 AVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIA 233
            + G G +GL AA   R +GA  I+  D +  R   A+ +     VN  E D  + EV+ 
Sbjct: 169 LITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPYA-DRLVNPLEED--LLEVVR 225

Query: 234 EMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLK 293
            +T  GV+  +E +GN   +      +  G G A ++G+PS    F      V+   T  
Sbjct: 226 RVTGSGVEVLLEFSGNEAAIHQGLMALIPG-GEARILGIPSDPIRFDLAGELVMRGITAF 284

Query: 294 GTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCII 350
           G      +          +  + +++L   +THR+P S   +AF  +  G+ ++ I+
Sbjct: 285 GIA--GRRLWQTWMQGTALVYSGRVDLSPLLTHRLPLSRYREAFGLLASGQAVKVIL 339

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* Length = 348

 Score =  237 bits (608), Expect = 2e-76
 Identities = 100/361 (27%), Positives = 156/361 (43%), Gaps = 37/361 (10%)

Query: 12  KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDL--YFWESKGQTPL-FPRIF 68
            A +  + G    + +V+V  P   EV IK+  TS+C TDL  Y W    Q+ +  P+I 
Sbjct: 6   VAIMKTKPGYGAELVEVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIM 65

Query: 69  GHEAAGVVESVGEGVSDLEVGDHVLPVFTGE----CGDCRHCRFSINGE----PVNHFLG 120
           GHE AG V  +G GV  +EVGD+V    + E    CG C  CR    G+          G
Sbjct: 66  GHEVAGEVVEIGPGVEGIEVGDYV----SVETHIVCGKCYACR---RGQYHVCQNTKIFG 118

Query: 121 TST---FSEYTVVHSGCVAKINPLAPLDKVCI---LSCGVSTGLGATLNVAKPERGSSVA 174
             T   F+EY VV +  + K     P +   +   L   V T L   +       G SV 
Sbjct: 119 VDTDGVFAEYAVVPAQNIWKNPKSIPPEYATLQEPLGNAVDTVLAGPI------SGKSVL 172

Query: 175 VFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAE 234
           + G G +GL     A+ +GA  +I  + S  R E AKK G    +N  E D  + + + +
Sbjct: 173 ITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPFEED--VVKEVMD 230

Query: 235 MTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLK 293
           +T+G GVD  +E +G    +    + V    G   L+G+           + +    T+ 
Sbjct: 231 ITDGNGVDVFLEFSGAPKALEQGLQAVTPA-GRVSLLGLYPGKVTIDFNNLIIFKALTIY 289

Query: 294 GTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIP-FSEINKAFEYMVKGEGLRCIISM 352
           G             +V  +  + +L L+  ITH+   F +  +AFE M  G+  + +  +
Sbjct: 290 GIT--GRHLWETWYTVSRLLQSGKLNLDPIITHKYKGFDKYEEAFELMRAGKTGKVVFML 347

Query: 353 E 353
           +
Sbjct: 348 K 348

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli} Length = 346

 Score =  234 bits (600), Expect = 4e-75
 Identities = 81/352 (23%), Positives = 140/352 (39%), Gaps = 35/352 (9%)

Query: 12  KAAVAWEAGKPLIIQDVEV-APPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGH 70
           K+ V  +    + + +  +       EVR+KI  + LC +DL     K     +P   GH
Sbjct: 2   KSVV-NDTDGIVRVAESVIPEIKHQDEVRVKIASSGLCGSDLPRIF-KNGAHYYPITLGH 59

Query: 71  EAAGVVESVGEGVSDLEVGDHVL--PVFTGECGDCRHCRFSINGEPVNH-----FLGTS- 122
           E +G +++VG GV DL  GD V   P+    C  C  C     G   +      F+G+  
Sbjct: 60  EFSGYIDAVGSGVDDLHPGDAVACVPLLP--CFTCPECL---KGFY-SQCAKYDFIGSRR 113

Query: 123 --TFSEYTVVHSGCVAKINPLAPLDKVCI---LSCGVSTGLGATLNVAKPERGSSVAVFG 177
              F+EY VV    V  +    P++       ++ G+        ++A+     +V + G
Sbjct: 114 DGGFAEYIVVKRKNVFALPTDMPIEDGAFIEPITVGL-----HAFHLAQGCENKNVIIIG 168

Query: 178 LGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTN 237
            G +GL A + A   GA  +  +D SS++   AK FG     N+SE      ++ + +  
Sbjct: 169 AGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSSEMS--APQMQSVLRE 226

Query: 238 G-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN--VLNERTLKG 294
                  +E  G    +  A E          LVG   +D    +      +  E T+ G
Sbjct: 227 LRFNQLILETAGVPQTVELAVEIAGPH-AQLALVGTLHQDLHLTSATFGKILRKELTVIG 285

Query: 295 TF--FGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGE 344
           ++  + +  P  +  +   +   ++L LE  I HR  F    +A   + +  
Sbjct: 286 SWMNYSSPWPGQEWETASRLLTERKLSLEPLIAHRGSFESFAQAVRDIARNA 337

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* Length = 370

 Score =  232 bits (595), Expect = 4e-74
 Identities = 82/357 (22%), Positives = 148/357 (41%), Gaps = 39/357 (10%)

Query: 12  KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL-FPRIFGH 70
           KA    E+   + +++V +  P   ++ +K++   +C TD +     G+ P   P   GH
Sbjct: 25  KAVR-LESVGNISVRNVGIPEPGPDDLLVKVEACGICGTDRHLLH--GEFPSTPPVTLGH 81

Query: 71  EAAGVVESVGEGVSDLEVGDHVL--PVFTGECGDCRHCRFSINGEPVNH-----FLGTST 123
           E  G+V   G  V D+  G  +   P  +  CG C  C+    G   N       +G   
Sbjct: 82  EFCGIVVEAGSAVRDIAPGARITGDPNIS--CGRCPQCQ---AGRV-NLCRNLRAIGIHR 135

Query: 124 ---FSEYTVVHSGCVAKINPLAPLDKVCI---LSCGVSTGLGATLNVAKPERGSSVAVFG 177
              F+EY +V      +I              L+C +       ++++  + GS+VA+ G
Sbjct: 136 DGGFAEYVLVPRKQAFEIPLTLDPVHGAFCEPLACCL-----HGVDLSGIKAGSTVAILG 190

Query: 178 LGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTN 237
            G +GL   + AR+AGA+ +I   R + +   A++ G T  V+ S  D  + E IA    
Sbjct: 191 GGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATVDPSAGD--VVEAIAGPVG 248

Query: 238 G---GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLK 293
               GVD  +EC G  + +  +      G G  V++GV  +      +P ++L  E  + 
Sbjct: 249 LVPGGVDVVIECAGVAETVKQSTRLAKAG-GTVVILGVLPQGEKVEIEPFDILFRELRVL 307

Query: 294 GTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCII 350
           G+F   +          D+     +E+++ I+ RI   E             ++ ++
Sbjct: 308 GSFINPF----VHRRAADLVATGAIEIDRMISRRISLDEAPDVISNPAAAGEVKVLV 360

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 Length = 359

 Score =  232 bits (594), Expect = 4e-74
 Identities = 87/359 (24%), Positives = 154/359 (42%), Gaps = 33/359 (9%)

Query: 3   STAGLILTCKAAVAWEAGKPLIIQDVEV-APPQAMEVRIKIKYTSLCRTDLYFWE---SK 58
           S +  +   KAA   E  KPL I+DV+        +V ++I    +C TDL+  +    +
Sbjct: 8   SQSLGVERLKAARLHEYNKPLRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHE 67

Query: 59  GQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVN-- 116
              P  P   GHE  G +E V EGV  LE GD V+       G C  CR    GE ++  
Sbjct: 68  LLQPKLPYTLGHENVGYIEEVAEGVEGLEKGDPVILHPAVTDGTCLACR---AGEDMHCE 124

Query: 117 --HFLGTS---TFSEYTVVHSGCVAKIN---PLAPLDKVCILSCGVSTGLGATLNVAKP- 167
              F G +    F+E+       V K+        L ++  L+    T   A +  A   
Sbjct: 125 NLEFPGLNIDGGFAEFMRTSHRSVIKLPKDISREKLVEMAPLADAGITAYRA-VKKAART 183

Query: 168 -ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDR 226
              G+ VA+ G+G +G  A +  ++   + +I +D   ++ + A++ G    V+      
Sbjct: 184 LYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVDARRD-- 241

Query: 227 PIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN 285
           P+++V+ E+T G GV+ +++  G+   +      +    G  ++VG   +          
Sbjct: 242 PVKQVM-ELTRGRGVNVAMDFVGSQATVDYTPYLLGRM-GRLIIVGYGGELRFPT--IRV 297

Query: 286 VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGE 344
           + +E + +G+  GN     +L  +V + +  ++ +E          EIN   E + KGE
Sbjct: 298 ISSEVSFEGSLVGN---YVELHELVTLALQGKVRVE---VDIHKLDEINDVLERLEKGE 350

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A Length = 356

 Score =  217 bits (554), Expect = 4e-68
 Identities = 85/368 (23%), Positives = 151/368 (41%), Gaps = 52/368 (14%)

Query: 12  KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLF----PRI 67
            + V       L +++  +  P   EV +++    +C +D+++WE  G+   F    P +
Sbjct: 9   LSLV-VHGPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWE-YGRIGNFIVKKPMV 66

Query: 68  FGHEAAGVVESVGEGVSDLEVGDHVLPVFTGE----CGDCRHCRFSINGEPVNH-----F 118
            GHEA+G VE VG  V  L+ GD V      E      +   C+    G   N      F
Sbjct: 67  LGHEASGTVEKVGSSVKHLKPGDRV----AIEPGAPRENDEFCK---MGRY-NLSPSIFF 118

Query: 119 LGTS----TFSEYTVVHSGCVAKINPLAPLDKVCI---LSCGVSTGLGATLNVAKPERGS 171
             T         +   ++    K+      ++  +   LS G+               G 
Sbjct: 119 CATPPDDGNLCRFYKHNAAFCYKLPDNVTFEEGALIEPLSVGI-----HACRRGGVTLGH 173

Query: 172 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEV 231
            V V G G +G+     A+  GA++++  D S+ R  +AK+ G    +  S+     QE+
Sbjct: 174 KVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKES--PQEI 231

Query: 232 IAEMTN---GGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN--V 286
             ++        + ++ECTG   ++ +       G G  VLVG+ S+       P+    
Sbjct: 232 ARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSG-GTLVLVGLGSEMTTV---PLLHAA 287

Query: 287 LNERTLKGTF-FGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG 345
           + E  +KG F + N       P  + M  +K + ++  +THR P  +  +AFE   KG G
Sbjct: 288 IREVDIKGVFRYCN-----TWPVAISMLASKSVNVKPLVTHRFPLEKALEAFETFKKGLG 342

Query: 346 LRCIISME 353
           L+ ++  +
Sbjct: 343 LKIMLKCD 350

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} Length = 404

 Score =  218 bits (557), Expect = 4e-68
 Identities = 74/376 (19%), Positives = 140/376 (37%), Gaps = 51/376 (13%)

Query: 12  KAAVAWEAGKPLIIQDVEV-APPQAMEVRIKIKYTSLCRTDL--YFWESKGQTPL----- 63
             +  W   + + +++V      +  E+ IK+K   +C +D+     + +G         
Sbjct: 32  LGSKVWRYPE-VRVEEVPEPRIEKPTEIIIKVKACGICGSDVHMAQTDEEGYILYPGLTG 90

Query: 64  FPRIFGHEAAGVVESVGEGVSD------LEVGDHVL--PVFTGECGDCRHCRFSINGE-- 113
           FP   GHE +GVV   G    +       E+G+ V    +    CG CR C     G   
Sbjct: 91  FPVTLGHEFSGVVVEAGPEAINRRTNKRFEIGEPVCAEEMLW--CGHCRPCA---EGFPN 145

Query: 114 --PVNHFLGTS---TFSEYTVVHSGCVAKINPLAPLDKVCI----------LSCGVSTGL 158
                + LG +    F+EY  V +     +  L  + +              S   +   
Sbjct: 146 HCENLNELGFNVDGAFAEYVKVDAKYAWSLRELEGVYEGDRLFLAGSLVEPTSVAYN--- 202

Query: 159 GATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF 218
              +       G +V + G G +GLAA    + AGAS++I  + S  R   AK+ G    
Sbjct: 203 AVIVRGGGIRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGADHV 262

Query: 219 VNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECV-HDGWGVAVLVGVPSKD 276
           ++ ++ +    E + + TNG G    +E TG    +    E V     G+   V + ++ 
Sbjct: 263 IDPTKEN--FVEAVLDYTNGLGAKLFLEATGVPQLVWPQIEEVIWRARGINATVAIVARA 320

Query: 277 AVFMTKPIN--VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEIN 334
              +        +    + G+    +      P V+ + M   +++ K I+  +   EI 
Sbjct: 321 DAKIPLTGEVFQVRRAQIVGSQ--GHSGHGTFPRVISL-MASGMDMTKIISKTVSMEEIP 377

Query: 335 KAFEYMVKGEGLRCII 350
           +  + +   + L  + 
Sbjct: 378 EYIKRLQTDKSLVKVT 393

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* Length = 347

 Score =  216 bits (552), Expect = 6e-68
 Identities = 83/349 (23%), Positives = 147/349 (42%), Gaps = 28/349 (8%)

Query: 12  KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWE--------SKGQTPL 63
           +A    E GKPL +Q++ V  P+  +V IK++   +C +D++  +         +     
Sbjct: 2   RAVRLVEIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVK 61

Query: 64  FPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRFSINGE----PVNHFL 119
            P   GHE AG +E VG+ V     GD V        G+C +CR    GE        +L
Sbjct: 62  LPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCR---IGEEHLCDSPRWL 118

Query: 120 GTS---TFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVF 176
           G +    ++EY +V               +   L+C   T   A +  A  +   ++ V 
Sbjct: 119 GINFDGAYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGITTYRA-VRKASLDPTKTLLVV 177

Query: 177 G-LGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEM 235
           G  G +G  A + A+    + IIGVD   +  E AK+ G    +N S  D P+ E+    
Sbjct: 178 GAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQD-PLAEIRRIT 236

Query: 236 TNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGT 295
            + GVD  ++   +   +    + +    G  V+VG+   D  +    I  L+E    G+
Sbjct: 237 ESKGVDAVIDLNNSEKTLSVYPKALAKQ-GKYVMVGLFGADLHYHAPLI-TLSEIQFVGS 294

Query: 296 FFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGE 344
             GN   ++D   ++ +   +  +++  IT  +   E N+A + +   +
Sbjct: 295 LVGN---QSDFLGIMRLA--EAGKVKPMITKTMKLEEANEAIDNLENFK 338

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} Length = 363

 Score =  211 bits (540), Expect = 6e-66
 Identities = 86/376 (22%), Positives = 144/376 (38%), Gaps = 55/376 (14%)

Query: 1   MSSTA-----GLILTCKAAVAWEAGKPLIIQDVEVAP-PQAMEVRIKIKYTSLCRTDLYF 54
           M+S+A     G+    +  + W +     ++ V+     +  EV + ++ T +C +D++F
Sbjct: 1   MASSASKTNIGVFTNPQHDL-WISEASPSLESVQKGEELKEGEVTVAVRSTGICGSDVHF 59

Query: 55  WESKGQTPLF----PRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGE----CGDCRHC 106
           W+  G           + GHE+AG V +V   V  ++VGD V      E    C  C  C
Sbjct: 60  WK-HGCIGPMIVECDHVLGHESAGEVIAVHPSVKSIKVGDRV----AIEPQVICNACEPC 114

Query: 107 RFSINGEPVNH-----FLGTS----TFSEYTVVHSGCVAKINPLAPLDKVCI--LSCGVS 155
                G   N      FL T         Y    +    KI  ++  +   +  LS  + 
Sbjct: 115 L---TGRY-NGCERVDFLSTPPVPGLLRRYVNHPAVWCHKIGNMSYENGAMLEPLSVAL- 169

Query: 156 TGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV 215
               A L  A    G  V + G G +GL     A+ AGA  ++  D    R + AK+   
Sbjct: 170 ----AGLQRAGVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEICP 225

Query: 216 TDFVNTSEHDRP--IQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGV 272
               +  E        + I E   G     ++ECTG   ++ +A   V  G G   ++GV
Sbjct: 226 EVVTHKVERLSAEESAKKIVESFGGIEPAVALECTGVESSIAAAIWAVKFG-GKVFVIGV 284

Query: 273 PSKDAVFMTKPIN--VLNERTLKGTF-FGNYKPRTDLPSVVDMYMNKQLELEKFITHRIP 329
              +      P     + E  L+  + + N       P  + +  N  ++L + +THR P
Sbjct: 285 GKNEIQI---PFMRASVREVDLQFQYRYCN-----TWPRAIRLVENGLVDLTRLVTHRFP 336

Query: 330 FSEINKAFEYMVKGEG 345
             +  KAFE     + 
Sbjct: 337 LEDALKAFETASDPKT 352

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} Length = 344

 Score =  207 bits (530), Expect = 9e-65
 Identities = 87/349 (24%), Positives = 150/349 (42%), Gaps = 30/349 (8%)

Query: 10  TCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWE--SKGQTPLFPRI 67
             KAA+  +  +PL I+DV +  PQ  EV I+I    +CRTDL  W+     Q    P I
Sbjct: 3   KSKAALLKKFSEPLSIEDVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVEAKQGFRLPII 62

Query: 68  FGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVN----HFLGTS- 122
            GHE AG +  VGE ++ ++ GD+V+   T     CR+CR    G+          G + 
Sbjct: 63  LGHENAGTIVEVGE-LAKVKKGDNVVVYATWGDLTCRYCR---EGKFNICKNQIIPGQTT 118

Query: 123 --TFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGA---TLNVAKPERGSSVAVFG 177
              FSEY +V S             +   L+   +T +GA    L          V V G
Sbjct: 119 NGGFSEYMLVKSSRWLVKLNSLSPVEAAPLADAGTTSMGAIRQALPFISKFAEPVVIVNG 178

Query: 178 LGAVGLAAAEGARIAGAS-RIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMT 236
           +G + +   +  +    +  I+G+ RS K  + A + G        +     + +I ++T
Sbjct: 179 IGGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGADYVSEMKD----AESLINKLT 234

Query: 237 NG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGT 295
           +G G   +++  G  +   +  + +    G  +LVG+  K           +  + L G+
Sbjct: 235 DGLGASIAIDLVGTEETTYNLGKLLAQE-GAIILVGMEGKRVSLEAFDT-AVWNKKLLGS 292

Query: 296 FFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGE 344
            +G+     DL  VV +  + +++       ++P  +INKAF  + +G 
Sbjct: 293 NYGS---LNDLEDVVRLSESGKIKP---YIIKVPLDDINKAFTNLDEGR 335

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 Length = 352

 Score =  202 bits (517), Expect = 9e-63
 Identities = 84/358 (23%), Positives = 146/358 (40%), Gaps = 47/358 (13%)

Query: 12  KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLF----PRI 67
            +AV       L ++   +  P+  EV +++ Y  +C +D++++E  G+   F    P +
Sbjct: 6   LSAV-LYKQNDLRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYE-HGRIADFIVKDPMV 63

Query: 68  FGHEAAGVVESVGEGVSDLEVGDHVL--PVFTGECGDCRHCRFSINGEPVNH-----FLG 120
            GHEA+G V  VG+ V  L+ GD V   P     C  C+ C+    G+  N      F  
Sbjct: 64  IGHEASGTVVKVGKNVKHLKKGDRVAVEPGVP--CRRCQFCK---EGKY-NLCPDLTFCA 117

Query: 121 TS----TFSEYTVVHSGCVAKINPLAPLDK-VCI--LSCGVSTGLGATLNVAKPERGSSV 173
           T       + Y V  +    K+     L++   +  LS GV          A  + G++V
Sbjct: 118 TPPDDGNLARYYVHAADFCHKLPDNVSLEEGALLEPLSVGV-----HACRRAGVQLGTTV 172

Query: 174 AVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIA 233
            V G G +GL +   A+  GA  ++   RS +R E AK  G    +           +I 
Sbjct: 173 LVIGAGPIGLVSVLAAKAYGAF-VVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIE 231

Query: 234 EMTNG---GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN--VLN 288
            + +      + +++C+GN   +         G G  +LVG+ S+       P+      
Sbjct: 232 RIRSAIGDLPNVTIDCSGNEKCITIGINITRTG-GTLMLVGMGSQMVTV---PLVNACAR 287

Query: 289 ERTLKGTF-FGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG 345
           E  +K  F + N     D P  ++M  + +  +++ +TH     +   AFE   K   
Sbjct: 288 EIDIKSVFRYCN-----DYPIALEMVASGRCNVKQLVTHSFKLEQTVDAFEAARKKAD 340

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* Length = 357

 Score =  198 bits (506), Expect = 5e-61
 Identities = 69/354 (19%), Positives = 119/354 (33%), Gaps = 40/354 (11%)

Query: 12  KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDL--YFWESKGQTPL-FPRIF 68
           KA          ++ +     P++ E  ++     +C TD         G        + 
Sbjct: 2   KAIAVKRGEDRPVVIEKPRPEPESGEALVRTLRVGVCGTDHEVIAGGHGGFPEGEDHLVL 61

Query: 69  GHEAAGVVESVGEGVSDLEVGDHVL--PVFTGECGDCRHCRFSINGE----PVNHFLGTS 122
           GHEA GVV  V    ++LE GD V+         G   +       +    P   +    
Sbjct: 62  GHEAVGVV--VDPNDTELEEGDIVVPTVRRPPASGTNEYFE---RDQPDMAPDGMYFERG 116

Query: 123 ------TFSEYTVVHSGCVAKINPLAPLDKVCI--LSCGV-STGLGATLNVAKPERGSSV 173
                   SE+       + +I          I  +S    +         A     SS 
Sbjct: 117 IVGAHGYMSEFFTSPEKYLVRIPRSQAELGFLIEPISITEKALEHAYASRSAFDWDPSSA 176

Query: 174 AVFGLGAVGLAAAEGARI--AGASRIIGV---DRSSKRFEEAKKFGVTDFVNTSEHDRPI 228
            V G G++GL      ++   G   +  +   DR     +  ++   T +V++ +     
Sbjct: 177 FVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDAT-YVDSRQTP--- 232

Query: 229 QEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN--- 285
            E + ++    +D   E TG   + I + + +    GV  L+GVPS  A  +        
Sbjct: 233 VEDVPDVY-EQMDFIYEATGFPKHAIQSVQALAPN-GVGALLGVPSDWAFEVDAGAFHRE 290

Query: 286 -VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFE 338
            VL+ + L G+   N        + V      +  LE  +T   P SE   AF+
Sbjct: 291 MVLHNKALVGSV--NSHVEHFEAATVTFTKLPKWFLEDLVTGVHPLSEFEAAFD 342

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A Length = 352

 Score =  190 bits (485), Expect = 6e-58
 Identities = 79/347 (22%), Positives = 127/347 (36%), Gaps = 32/347 (9%)

Query: 14  AVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAA 73
             A  +   +   + E   P   +  ++    + C +D++             I GHEA 
Sbjct: 3   GFAMLSIGKVGWIEKEKPAPGPFDAIVRPLAVAPCTSDIHTVFEGAIGERHNMILGHEAV 62

Query: 74  GVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCR-----FSINGEPVNHFLGTS--TFSE 126
           G V  VG  V D + GD V+             +      S        F       F E
Sbjct: 63  GEVVEVGSEVKDFKPGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNVKDGVFGE 122

Query: 127 YTVVH---SGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGL 183
           +  V+         +    PL+   ++   ++TG       A  + G +V V G+G VGL
Sbjct: 123 FFHVNDADMNLA-HLPKEIPLEAAVMIPDMMTTGFHGAEL-ANIKLGDTVCVIGIGPVGL 180

Query: 184 AAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDR 242
            +  GA   GA RI  V       + A ++G TD +N    D  I E I + T+G GVD+
Sbjct: 181 MSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKNGD--IVEQILKATDGKGVDK 238

Query: 243 SVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYK- 301
            V   G++     A + +  G      V           +  N+   R+  G   G+   
Sbjct: 239 VVIAGGDVHTFAQAVKMIKPG-SDIGNVNYLG-------EGDNIDIPRSEWGVGMGHKHI 290

Query: 302 -------PRTDLPSVVDMYMNKQLELEKFITHRIP-FSEINKAFEYM 340
                   R  +  ++D+   K+++  K +TH    F  I KAF  M
Sbjct: 291 HGGLCPGGRLRMERLIDLVFYKRVDPSKLVTHVFRGFDNIEKAFMLM 337

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* Length = 366

 Score =  189 bits (482), Expect = 2e-57
 Identities = 65/376 (17%), Positives = 117/376 (31%), Gaps = 53/376 (14%)

Query: 12  KAAVAWEAGKPLIIQDVEV-APPQAMEVRIKIKYTSLCRTDL-----YFWESKGQTPLFP 65
           KA +       + ++DV+        +++I+  Y  +C  D          S        
Sbjct: 2   KAIIVKPPNAGVQVKDVDEKKLDSYGKIKIRTIYNGICGADREIVNGKLTLSTLPKGKDF 61

Query: 66  RIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRFSINGEP----------- 114
            + GHEA GVVE    G S    GD V+PV    CG CR+C     G P           
Sbjct: 62  LVLGHEAIGVVEESYHGFS---QGDLVMPVNRRGCGICRNCL---VGRPDFCETGEFGEA 115

Query: 115 -VNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCI--LSCGV---------STGLGATL 162
            ++   G     E+       + KI        +    L+               +    
Sbjct: 116 GIHKMDGF--MREWWYDDPKYLVKIPKSIEDIGILAQPLADIEKSIEEILEVQKRVPVWT 173

Query: 163 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS 222
                     V V G G +G+      R  G    +   R     E+            S
Sbjct: 174 CDDGTLNCRKVLVVGTGPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEETKTNYYNS 233

Query: 223 EHDRPIQEVIAEMTNGGVDRSVECTG-NIDNMISAFECVHDGWGVAVLVGVPSKDAV-FM 280
            +     + + +   G  D  ++ TG +++ + +    +    GV  L G  +  +V   
Sbjct: 234 SNG---YDKLKDSV-GKFDVIIDATGADVNILGNVIPLLGRN-GVLGLFGFSTSGSVPLD 288

Query: 281 TKPIN--VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLE----LEKFITHRIPFSEIN 334
            K +   V   +T+ G   G    +      V    + +       +  IT  +  ++  
Sbjct: 289 YKTLQEIVHTNKTIIGLVNGQ---KPHFQQAVVHLASWKTLYPKAAKMLITKTVSINDEK 345

Query: 335 KAFEYMVKGEGLRCII 350
           +  + + + E     I
Sbjct: 346 ELLKVLREKEHGEIKI 361

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* Length = 340

 Score =  179 bits (457), Expect = 6e-54
 Identities = 96/348 (27%), Positives = 141/348 (40%), Gaps = 33/348 (9%)

Query: 10  TCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESK-GQTPLFPRIF 68
             KAAV    G PL I +V V  P   +V++KI+ + +C TDL+  +      P  P I 
Sbjct: 2   MMKAAVVRAFGAPLTIDEVPVPQPGPGQVQVKIEASGVCHTDLHAADGDWPVKPTLPFIP 61

Query: 69  GHEAAGVVESVGEGVSDLEVGDHV-LPVFTGECGDCRHCRFSINGE----PVNHFLGTST 123
           GHE  G V +VG GVS ++ GD V +P     CG C HC     G           G S 
Sbjct: 62  GHEGVGYVSAVGSGVSRVKEGDRVGVPWLYSACGYCEHCL---QGWETLCEKQQNTGYSV 118

Query: 124 ---FSEYTVVHSGCVAKINPLAPLDKVCILSC-GVSTGLGATLNVAKPERGSSVAVFGLG 179
              + EY V     V  +       ++  + C GV T     L V     G  V + G+G
Sbjct: 119 NGGYGEYVVADPNYVGLLPDKVGFVEIAPILCAGV-TVYKG-LKVTDTRPGQWVVISGIG 176

Query: 180 AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGG 239
            +G  A + AR  G  R+  VD    +   A++ G    VN  + D P   +  E+  GG
Sbjct: 177 GLGHVAVQYARAMGL-RVAAVDIDDAKLNLARRLGAEVAVNARDTD-PAAWLQKEI--GG 232

Query: 240 VDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA---VFMTKPINVLNERTLKGTF 296
               +    +      A   V  G G   L G+P  D    +F      VL   T++G+ 
Sbjct: 233 AHGVLVTAVSPKAFSQAIGMVRRG-GTIALNGLPPGDFGTPIFDV----VLKGITIRGSI 287

Query: 297 FGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGE 344
            G    R+DL   +D   +  +   K         ++N  F  + +G+
Sbjct: 288 VGT---RSDLQESLDFAAHGDV---KATVSTAKLDDVNDVFGRLREGK 329

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} Length = 347

 Score =  178 bits (455), Expect = 1e-53
 Identities = 86/351 (24%), Positives = 145/351 (41%), Gaps = 35/351 (9%)

Query: 10  TCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESK-GQTPLFPRIF 68
           T K  + +E+   L  +D+ V  P+A E+ I +KY+ +C TDL+ W          P + 
Sbjct: 5   TQKGVIFYESHGKLEYKDIPVPKPKANELLINVKYSGVCHTDLHAWHGDWPLPVKLPLVG 64

Query: 69  GHEAAGVVESVGEGVSDLEVGDHV-LPVFTGECGDCRHCRFSINGE----PVNHFLGTST 123
           GHE AGVV  +GE V   ++GD+  +    G C  C +C     G     P     G + 
Sbjct: 65  GHEGAGVVVGMGENVKGWKIGDYAGIKWLNGSCMACEYCE---LGNESNCPHADLSGYTH 121

Query: 124 ---FSEYTVVHSGCVAKINPLAPLDKVCILSC-GVSTGLGATLNVAKPERGSSVAVFGLG 179
              F +Y    +   A I     L +V  + C G++      L  A    G  VA+ G  
Sbjct: 122 DGSFQQYATADAVQAAHIPQGTDLAQVAPILCAGITVYKA--LKSANLMAGHWVAISGAA 179

Query: 180 ------AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIA 233
                 AV  A A G       R++G+D    + E  +  G   F++ ++    +  V+ 
Sbjct: 180 GGLGSLAVQYAKAMGY------RVLGIDGGEGKEELFRSIGGEVFIDFTKEKDIVGAVLK 233

Query: 234 EMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLK 293
             T+GG    +  + +   + ++   V    G  VLVG+P+           V+   ++ 
Sbjct: 234 A-TDGGAHGVINVSVSEAAIEASTRYVRAN-GTTVLVGMPAGAKCCSDVFNQVVKSISIV 291

Query: 294 GTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGE 344
           G++ GN   R D    +D +    +   K     +  S + + +E M KG+
Sbjct: 292 GSYVGN---RADTREALDFFARGLV---KSPIKVVGLSTLPEIYEKMEKGQ 336

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A Length = 339

 Score =  178 bits (455), Expect = 1e-53
 Identities = 109/362 (30%), Positives = 165/362 (45%), Gaps = 44/362 (12%)

Query: 12  KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESK-GQTPLFPRIFGH 70
           KAAV  +  +PL I++VE       EV ++IK   +C TDL+         P  P I GH
Sbjct: 2   KAAVVEQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGH 61

Query: 71  EAAGVVESVGEGVSDLEVGDHV-LPVFTGECGDCRHCRFSINGEPVN----HFLGTST-- 123
           E  G+VE VG GV+ L+VGD V +P     CG C +C    +G+          G S   
Sbjct: 62  EGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCL---SGQETLCEHQKNAGYSVDG 118

Query: 124 -FSEYTVVHSGCVAKINPLAPLDKVCILSC-GVSTGLGATLNVAKPERGSSVAVFGLG-- 179
            ++EY    +  V KI      ++   + C GV+T     L V   + G  VA++G+G  
Sbjct: 119 GYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKA--LKVTGAKPGEWVAIYGIGGL 176

Query: 180 ---AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMT 236
              AV  A A G        ++ VD   ++ E AK+ G    VN  + D    + + E  
Sbjct: 177 GHVAVQYAKAMGL------NVVAVDIGDEKLELAKELGADLVVNPLKED--AAKFMKEKV 228

Query: 237 NGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD---AVFMTKPINVLNERTLK 293
            GGV  +V    +     SA+  +  G G  VLVG+P ++    +F T    VLN   + 
Sbjct: 229 -GGVHAAVVTAVSKPAFQSAYNSIRRG-GACVLVGLPPEEMPIPIFDT----VLNGIKII 282

Query: 294 GTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGL-RCIISM 352
           G+  G    R DL   +      ++   K I    P  +IN+ F+ M+KG+   R ++++
Sbjct: 283 GSIVGT---RKDLQEALQFAAEGKV---KTIIEVQPLEKINEVFDRMLKGQINGRVVLTL 336

Query: 353 ED 354
           ED
Sbjct: 337 ED 338

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida} Length = 398

 Score =  160 bits (407), Expect = 5e-46
 Identities = 69/378 (18%), Positives = 131/378 (34%), Gaps = 57/378 (15%)

Query: 21  KPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFP-RIFGHEAAGVVESV 79
            P +  +        +   +K+  T++C +D + +   G+  +    + GHE  G V   
Sbjct: 21  YPKLEHNNRKLEHAVI---LKVVSTNICGSDQHIYR--GRFIVPKGHVLGHEITGEVVEK 75

Query: 80  GEGVSDLEVGDHVLPVFTGECGDCRHCR---FSI------NGEPVNHFLGTSTFS----- 125
           G  V  +++GD V   F   CG CR+C+     +      N +      G          
Sbjct: 76  GSDVELMDIGDLVSVPFNVACGRCRNCKEARSDVCENNLVNPDADLGAFGFDLKGWSGGQ 135

Query: 126 -EYTVV---HSGCVA---KINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL 178
            EY +V       +    K   +  +  + ++S  + TG    ++ A  + GS V + G 
Sbjct: 136 AEYVLVPYADYMLLKFGDKEQAMEKIKDLTLISDILPTGFHGCVS-AGVKPGSHVYIAGA 194

Query: 179 GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG 238
           G VG  AA GAR+ GA+ +I  D++ +R +     G    ++      P+++ I ++   
Sbjct: 195 GPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDAGFET-IDLRNSA-PLRDQIDQILGK 252

Query: 239 -GVDRSVECTG--------------NIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP 283
             VD  V+  G                  + S F+ V  G  + +  G+           
Sbjct: 253 PEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGI-PGIYVGSDPDPVNK 311

Query: 284 INVLNERTLK-GTFF--------GNYKPRTDLPSVVDMYMNKQLEL--EKFITHRIPFSE 332
                   L  G  +        G          + +  +  Q+    +      I   +
Sbjct: 312 DAGSGRLHLDFGKMWTKSIRIMTGMAPVTNYNRHLTEAILWDQMPYLSKVMNIEVITLDQ 371

Query: 333 INKAFEYMVKGEGLRCII 350
               +    KG   + +I
Sbjct: 372 APDGYAKFDKGSPAKFVI 389

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1 Length = 398

 Score =  158 bits (403), Expect = 2e-45
 Identities = 74/377 (19%), Positives = 130/377 (34%), Gaps = 55/377 (14%)

Query: 21  KPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFP-RIFGHEAAGVVESV 79
            P +             V +K+  T++C +D +     G+T      + GHE  G V   
Sbjct: 21  YPKMQDPRGKKIEH--GVILKVVSTNICGSDQHMVR--GRTTAQVGLVLGHEITGEVIEK 76

Query: 80  GEGVSDLEVGDHVLPVFTGECGDCRHCR---FSI----NGEPVNHFLGTSTF-------S 125
           G  V +L++GD V   F   CG CR C+     +    N        G           +
Sbjct: 77  GRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTGGQA 136

Query: 126 EYTVV---HSGCVA---KINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLG 179
           EY +V       +    +   +  +  +  LS  + TG    +  A    GS+V V G G
Sbjct: 137 EYVLVPYADFNLLKLPDRDKAMEKIRDLTCLSDILPTGYHGAVT-AGVGPGSTVYVAGAG 195

Query: 180 AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG- 238
            VGLAAA  AR+ GA+ +I  D +  R   AK  G     + S    P+ E IA +    
Sbjct: 196 PVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFEI-ADLSLDT-PLHEQIAALLGEP 253

Query: 239 GVDRSVECTG---------------NIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP 283
            VD +V+  G                   + S  +       + +  G+   +       
Sbjct: 254 EVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGI-PGLYVTEDPGAVDA 312

Query: 284 INVLNERTLK-GTFF--------GNYKPRTDLPSVVDMYMNKQLELEK-FITHRIPFSEI 333
              +   +++ G  +        G         +++   M  ++ + +      I   + 
Sbjct: 313 AAKIGSLSIRFGLGWAKSHSFHTGQTPVMKYNRALMQAIMWDRINIAEVVGVQVISLDDA 372

Query: 334 NKAFEYMVKGEGLRCII 350
            + +     G   + +I
Sbjct: 373 PRGYGEFDAGVPKKFVI 389

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} Length = 363

 Score =  128 bits (325), Expect = 2e-34
 Identities = 75/330 (22%), Positives = 121/330 (36%), Gaps = 25/330 (7%)

Query: 23  LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL---FPRIFGHEAAGVVESV 79
           L + +  V      ++ ++    SL   D      +    L   FP +   + +GVVE+V
Sbjct: 41  LKLAERPVPEAGEHDIIVRTLAVSLNYRDK--LVLETGMGLDLAFPFVPASDMSGVVEAV 98

Query: 80  GEGVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTS---TFSEYTVVHSGCVA 136
           G+ V+    GD V+  F     D           P    LG +     SEY V+  G   
Sbjct: 99  GKSVTRFRPGDRVISTFAPGWLDGLRP--GTGRTPAYETLGGAHPGVLSEYVVLPEGWFV 156

Query: 137 KINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASR 196
                    +   L C   T   A +       G  V V G G V L   + A+  GA  
Sbjct: 157 AAPKSLDAAEASTLPCAGLTAWFALVEKGHLRAGDRVVVQGTGGVALFGLQIAKATGA-E 215

Query: 197 IIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMIS 255
           +I    S ++ + A   G    +N  E D    E +  +T   G D  +E  G    +  
Sbjct: 216 VIVTSSSREKLDRAFALGADHGINRLEED--WVERVYALTGDRGADHILEIAGG-AGLGQ 272

Query: 256 AFECVHDGWGVAVLVGVPSKDAVFMTKPINVL--NERTLKGTFFGNYKPRTDLPSVVDMY 313
           + + V    G   ++GV     V  + P+  L      ++G   G    R  L  +V   
Sbjct: 273 SLKAVAPD-GRISVIGVLEGFEV--SGPVGPLLLKSPVVQGISVG---HRRALEDLVGAV 326

Query: 314 MNKQLELEKFITHRIPFSEINKAFEYMVKG 343
              +L L+  I  R  F+E+ +A  ++ +G
Sbjct: 327 --DRLGLKPVIDMRYKFTEVPEALAHLDRG 354

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} Length = 343

 Score =  126 bits (319), Expect = 9e-34
 Identities = 74/346 (21%), Positives = 131/346 (37%), Gaps = 27/346 (7%)

Query: 12  KAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL-FPRIF 68
           +A V    G P  L + D+ V  P   EVR+++K  +L   D++  +      L  P + 
Sbjct: 2   RAVVMRARGGPEVLEVADLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVASPKLPLPHVL 61

Query: 69  GHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRF-SINGEPVNHFLGTS---TF 124
           G + +GVV++VG GV     GD V+      CG C  C     N  P    LG     T+
Sbjct: 62  GADGSGVVDAVGPGVEGFAPGDEVVINPGLSCGRCERCLAGEDNLCPRYQILGEHRHGTY 121

Query: 125 SEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFG-LGAVGL 183
           +EY V+    +A        ++   +     T     ++      G  V V      V +
Sbjct: 122 AEYVVLPEANLAPKPKNLSFEEAAAIPLTFLTAWQMVVDKLGVRPGDDVLVMAAGSGVSV 181

Query: 184 AAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDR 242
           AA + A++ GA R+I    S  +   AK  G  + VN +  D    + +  +T G G D+
Sbjct: 182 AAIQIAKLFGA-RVIATAGSEDKLRRAKALGADETVNYTHPD--WPKEVRRLTGGKGADK 238

Query: 243 SVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV----LNERTLKGTFFG 298
            V+ TG         +   +G G   + G  S         +        + ++ G+   
Sbjct: 239 VVDHTGA-LYFEGVIKATANG-GRIAIAGASSGYEG----TLPFAHVFYRQLSILGSTMA 292

Query: 299 NYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGE 344
               ++ L  ++      +L+    +   +P     +    + +  
Sbjct: 293 ---SKSRLFPILRFVEEGKLKP--VVGQVLPLEAAAEGHRLLEERR 333

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A Length = 357

 Score =  126 bits (320), Expect = 9e-34
 Identities = 70/352 (19%), Positives = 125/352 (35%), Gaps = 50/352 (14%)

Query: 12  KAAVAWEAGKP---LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESK-GQTPLFPRI 67
           +A V    G P   + ++++E+A  +  +VR+K+    +  +D+   +   G  P  P +
Sbjct: 28  RALVYGHHGDPAKVVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGLLPELPAV 87

Query: 68  FGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEY 127
            G+E    V +VG  V+ L+ GD V+P   G                    LG  T+   
Sbjct: 88  GGNEGVAQVVAVGSNVTGLKPGDWVIPANAG--------------------LG--TWRTE 125

Query: 128 TVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAA 186
            V     + ++    PL     L     T     ++  + + G SV        VG A  
Sbjct: 126 AVFSEEALIQVPSDIPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVI 185

Query: 187 EGARIAGASRIIGVDRSSKRFEE----AKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVD 241
           + A   G  R I V R     ++     K  G    +   E  RP  E+     +     
Sbjct: 186 QIAAALGL-RTINVVRDRPDIQKLSDRLKSLGAEHVITEEELRRP--EMKNFFKDMPQPR 242

Query: 242 RSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL--NERTLKGTFFGN 299
            ++ C G   +       +  G G  V  G  +K  V     +++L   +  L+G +   
Sbjct: 243 LALNCVGG-KSSTELLRQLARG-GTMVTYGGMAKQPV--VASVSLLIFKDLKLRGFWLSQ 298

Query: 300 YKPRTD-------LPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGE 344
           +K           + ++ D+    QL        ++P  +   A E  +K  
Sbjct: 299 WKKDHSPDQFKELILTLCDLIRRGQLTAP--ACSQVPLQDYQSALEASMKPF 348

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A Length = 456

 Score =  127 bits (321), Expect = 3e-33
 Identities = 59/381 (15%), Positives = 114/381 (29%), Gaps = 60/381 (15%)

Query: 12  KAAVAWEAGKP---LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT------- 61
            A +      P   + + DV V      E  + +  +S+    +    S  +        
Sbjct: 44  FAGLETRDKDPRKSIHLDDVPVPELGPGEALVAVMASSVNYNSV--HTSIFEPLSTFGFL 101

Query: 62  -------------PLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRF 108
                         L   + G + AGVV   G GV+  + GD V+        +      
Sbjct: 102 ERYGRVSDLAKRHDLPYHVIGSDLAGVVLRTGPGVNAWQAGDEVVAHCLSVELESSDGHN 161

Query: 109 SINGEPVNHFLGTST----FSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGA--TL 162
               +P     G  T     +E  +V S  +         ++        ST      + 
Sbjct: 162 DTMLDPEQRIWGFETNFGGLAEIALVKSNQLMPKPDHLSWEEAAAPGLVNSTAYRQLVSR 221

Query: 163 NVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT 221
           N A  ++G +V ++G  G +G  A + A   GA   I V  S ++ E  +  G    ++ 
Sbjct: 222 NGAGMKQGDNVLIWGASGGLGSYATQFALAGGA-NPICVVSSPQKAEICRAMGAEAIIDR 280

Query: 222 SEHDRPIQ---------------EVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWG 265
           +                      + I E+T G  +D   E  G  +   ++      G G
Sbjct: 281 NAEGYRFWKDENTQDPKEWKRFGKRIRELTGGEDIDIVFEHPGR-ETFGASVFVTRKG-G 338

Query: 266 VAVLVGVPSKDAVFMTKPINVL--NERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKF 323
                   S            L  + + + G+ F N     +      +    +  +   
Sbjct: 339 TITTCASTSGYMH--EYDNRYLWMSLKRIIGSHFAN---YREAWEANRLI--AKGRIHPT 391

Query: 324 ITHRIPFSEINKAFEYMVKGE 344
           ++      +  +A   + +  
Sbjct: 392 LSKVYSLEDTGQAAYDVHRNL 412

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A Length = 447

 Score =  121 bits (306), Expect = 3e-31
 Identities = 57/367 (15%), Positives = 116/367 (31%), Gaps = 53/367 (14%)

Query: 21  KPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ-------------------- 60
           K L + +V +      EV + +  +S+    +  W +  +                    
Sbjct: 48  KSLRLGEVPMPELAPDEVLVAVMASSINYNTV--WSAMFEPIPTFHFLKQNARQGGWATR 105

Query: 61  TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVL--PVFTGECGDCRHCRFSINGEPVNHF 118
                 + G + +GVV   G GV   + GDHV+  P    E     H    +  E     
Sbjct: 106 HDQPYHVLGSDCSGVVVRTGIGVRRWKPGDHVIVHPAHVDEQEPATHGDGMLGTEQRAWG 165

Query: 119 LGTS--TFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGA--TLNVAKPERGSSVA 174
             T+    +EY VV +  +         ++  +      T      +   A+ ++G  V 
Sbjct: 166 FETNFGGLAEYGVVRASQLLPKPAHLTWEEAAVSPLCAGTAYRMLVSDRGAQMKQGDIVL 225

Query: 175 VFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHD-------- 225
           ++G  G +G  A +  +  G    + V  S+++    +  G    +N +E          
Sbjct: 226 IWGASGGLGSYAIQFVKNGGG-IPVAVVSSAQKEAAVRALGCDLVINRAELGITDDIADD 284

Query: 226 --------RPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA 277
                   R + +++ E      D   E TG       +      G G  V  G  S   
Sbjct: 285 PRRVVETGRKLAKLVVEKAGREPDIVFEHTGR-VTFGLSVIVARRG-GTVVTCGSSSGYL 342

Query: 278 VFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAF 337
                    +  + + G+   N     +  +   ++ +  +     ++   P +E  +A 
Sbjct: 343 HTFDNRYLWMKLKKIVGSHGAN---HEEQQATNRLFESGAVVPA--MSAVYPLAEAAEAC 397

Query: 338 EYMVKGE 344
             +    
Sbjct: 398 RVVQTSR 404

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 369

 Score =  119 bits (300), Expect = 7e-31
 Identities = 91/377 (24%), Positives = 137/377 (36%), Gaps = 85/377 (22%)

Query: 9   LTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIF 68
           L  KA  A+ A +PL   D+    P   +V+I+I Y  +C +DL+   S+    ++P + 
Sbjct: 21  LKIKAVGAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVP 80

Query: 69  GHEAAGVVESVGEGVSDLEVGDHV-LPVFTGECGDCRHCR-----------FSINGEPVN 116
           GHE  G V +VG+ V     GD V +      C  C  C             + N     
Sbjct: 81  GHEIVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNS--PT 138

Query: 117 HFLGTST---FSEYTVVHSGCVAKI-NPLAPLDKVCILSCGVSTGLGATL------NVAK 166
                 T   +S+  VVH   V +I +P   L  V  L C      G T         A 
Sbjct: 139 PDEPGHTLGGYSQQIVVHERYVLRIRHPQEQLAAVAPLLCA-----GITTYSPLRHWQAG 193

Query: 167 PERGSSVAVFGLG-----AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT 221
           P  G  V V G+G      + LA A GA +   +       S  + E AK  G  + VN+
Sbjct: 194 P--GKKVGVVGIGGLGHMGIKLAHAMGAHVVAFT------TSEAKREAAKALGADEVVNS 245

Query: 222 SEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGW----------GVAVLVG 271
              D        EM             + D +++     H+            G   LVG
Sbjct: 246 RNAD--------EMA--------AHLKSFDFILNTVAAPHN-LDDFTTLLKRDGTMTLVG 288

Query: 272 VPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLEL--EKFITH--- 326
            P+           ++  R + G+  G       +P   +M     L+   E  I     
Sbjct: 289 APATPHKSPEVFNLIMKRRAIAGSMIGG------IPETQEM-----LDFCAEHGIVADIE 337

Query: 327 RIPFSEINKAFEYMVKG 343
            I   +IN+A+E M++G
Sbjct: 338 MIRADQINEAYERMLRG 354

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* Length = 366

 Score =  115 bits (290), Expect = 2e-29
 Identities = 78/376 (20%), Positives = 128/376 (34%), Gaps = 86/376 (22%)

Query: 10  TCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFG 69
                 A +    L   +         +VR K+ Y  +C +DL+  ++     ++P + G
Sbjct: 16  KAFGWAARDQSGHLSPFNFSRRATGEEDVRFKVLYCGVCHSDLHSIKNDWGFSMYPLVPG 75

Query: 70  HEAAGVVESVGEGVSDLEVGDHV-LPVFTGECGDCRHCR-----------FSINGEPVNH 117
           HE  G V  VG  V  + VGD V +    G C  C  C             +      + 
Sbjct: 76  HEIVGEVTEVGSKVKKVNVGDKVGVGCLVGACHSCESCANDLENYCPKMILTYASIYHD- 134

Query: 118 FLGTST---FSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATL-------NVAKP 167
             GT T   +S + V +   + +     PLD    L C      G T+        + +P
Sbjct: 135 --GTITYGGYSNHMVANERYIIRFPDNMPLDGGAPLLCA-----GITVYSPLKYFGLDEP 187

Query: 168 ERGSSVAVFGLG-----AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS 222
             G  + + GLG     AV  A A G+++   S        SK+ E  K FG   F+ + 
Sbjct: 188 --GKHIGIVGLGGLGHVAVKFAKAFGSKVTVIST-----SPSKKEEALKNFGADSFLVSR 240

Query: 223 EHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGW----------GVAVLVGV 272
           + +        +M            G +D +I     VH             G  +LVG 
Sbjct: 241 DQE--------QMQ--------AAAGTLDGIIDTVSAVHP-LLPLFGLLKSHGKLILVGA 283

Query: 273 PSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLEL--EKFITH---R 327
           P K        + +   + + G+  G       +    +M     ++   +  IT     
Sbjct: 284 PEKPLELPAFSL-IAGRKIVAGSGIGG------MKETQEM-----IDFAAKHNITADIEV 331

Query: 328 IPFSEINKAFEYMVKG 343
           I    +N A E + K 
Sbjct: 332 ISTDYLNTAMERLAKN 347

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* Length = 357

 Score =  114 bits (289), Expect = 2e-29
 Identities = 87/376 (23%), Positives = 137/376 (36%), Gaps = 86/376 (22%)

Query: 10  TCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFG 69
                 A +    L      +      +V I+I    +C TDL+  ++      +P + G
Sbjct: 9   KTTGWAARDPSGILSPYTYTLRETGPEDVNIRIICCGICHTDLHQTKNDLGMSNYPMVPG 68

Query: 70  HEAAGVVESVGEGVSDLEVGDHV-LPVFTGECGDCRHCR-----------FSINGEPVNH 117
           HE  G V  VG  VS   VGD V +    G CG C  C            +S N   +N 
Sbjct: 69  HEVVGEVVEVGSDVSKFTVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWSYNDVYIN- 127

Query: 118 FLGTST---FSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATL-------NVAKP 167
             G  T   F++ TVVH   V KI     +++   L C      G T+        + +P
Sbjct: 128 --GQPTQGGFAKATVVHQKFVVKIPEGMAVEQAAPLLCA-----GVTVYSPLSHFGLKQP 180

Query: 168 ERGSSVAVFGLG-----AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS 222
             G    + GLG      V +A A G  +   S       + KR E  +  G  D+V  S
Sbjct: 181 --GLRGGILGLGGVGHMGVKIAKAMGHHVTVISS-----SNKKREEALQDLGADDYVIGS 233

Query: 223 EHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGW----------GVAVLVGV 272
           +          +M+        E   ++D +I      H             G  +L+GV
Sbjct: 234 DQA--------KMS--------ELADSLDYVIDTVPVHHA-LEPYLSLLKLDGKLILMGV 276

Query: 273 PSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLEL--EKFITH---R 327
            +    F+T  + +L  + + G+F G+      +    +M     LE   EK ++     
Sbjct: 277 INNPLQFLTPLL-MLGRKVITGSFIGS------MKETEEM-----LEFCKEKGLSSIIEV 324

Query: 328 IPFSEINKAFEYMVKG 343
           +    +N AFE + K 
Sbjct: 325 VKMDYVNTAFERLEKN 340

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} Length = 348

 Score =  110 bits (278), Expect = 6e-28
 Identities = 78/377 (20%), Positives = 134/377 (35%), Gaps = 88/377 (23%)

Query: 9   LTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIF 68
           +  K    +   +     D         +V I I Y  +C +D++   S+ +  ++P I 
Sbjct: 3   VQSKGFAIFSKDEHFKPHDFSRHAVGPRDVLIDILYAGICHSDIHSAYSEWKEGIYPMIP 62

Query: 69  GHEAAGVVESVGEGVSDLEVGDHV-LPVFTGECGDCRHCR-----------FSINGEPVN 116
           GHE AG+++ VG+GV   ++GD V +  F   C  C+ C+           F+ +     
Sbjct: 63  GHEIAGIIKEVGKGVKKFKIGDVVGVGCFVNSCKACKPCKEHQEQFCTKVVFTYDCLDSF 122

Query: 117 HFLGTST---FSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATL------NVAKP 167
           H         +S   VV    V  ++  APL+KV  L C      G T       +    
Sbjct: 123 H-DNEPHMGGYSNNIVVDENYVISVDKNAPLEKVAPLLCA-----GITTYSPLKFSKVTK 176

Query: 168 ERGSSVAVFGLG-----AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS 222
             G+ V V G G     AV  A A GA ++  +R        K+ ++A   GV  F    
Sbjct: 177 --GTKVGVAGFGGLGSMAVKYAVAMGAEVSVFAR-----NEHKK-QDALSMGVKHFYTDP 228

Query: 223 EHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHD---------GWGVAVLVGVP 273
           +                     +C   +D +IS     +D           G   LVG+P
Sbjct: 229 K---------------------QCKEELDFIISTIPTHYDLKDYLKLLTYNGDLALVGLP 267

Query: 274 SKDAVFMTKPINVL--NERTLKGTFFGNYKPRTDLPSVVDMYMNKQLEL--EKFIT---H 326
             +   +    + +    R + G+  G       +    +M     ++   +  I     
Sbjct: 268 PVEVAPVLSVFDFIHLGNRKVYGSLIGG------IKETQEM-----VDFSIKHNIYPEID 316

Query: 327 RIPFSEINKAFEYMVKG 343
            I   +I+ A+  +  G
Sbjct: 317 LILGKDIDTAYHNLTHG 333

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* Length = 371

 Score =  110 bits (278), Expect = 9e-28
 Identities = 68/364 (18%), Positives = 116/364 (31%), Gaps = 57/364 (15%)

Query: 12  KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHE 71
            A    +  +  +            +V ++++  ++  +D      +GQ        G +
Sbjct: 13  TALTVNDHDEVTVWNAAPCPMLPRDQVYVRVEAVAINPSD---TSMRGQFATPWAFLGTD 69

Query: 72  AAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVH 131
            AG V +VG  V+ ++VGD V                     P     G   FS+YTV  
Sbjct: 70  YAGTVVAVGSDVTHIQVGDRV-------------YGAQNEMCPRTPDQG--AFSQYTVTR 114

Query: 132 SGCVAKINPLAPLDKVCILSCGVST----------GLGATLNVAKPERGSSVAVF---GL 178
               AKI      ++   L  G+ST           L +      P     V V    G 
Sbjct: 115 GRVWAKIPKGLSFEQAAALPAGISTAGLAMKLLGLPLPSPSADQPPTHSKPVYVLVYGGS 174

Query: 179 GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG 238
            A      +  R++G   I     S   F+ AK  G  +  +       + + I   T  
Sbjct: 175 TATATVTMQMLRLSGYIPIATC--SPHNFDLAKSRGAEEVFDY--RAPNLAQTIRTYTKN 230

Query: 239 GVDRSVECTGNIDNMISAFECVHDGWG-VAVLVGVPSKDAVFMTKPINVLNERTLKGTFF 297
            +  +++C  N+++    F  +    G    L   P   A        V  + TL  T F
Sbjct: 231 NLRYALDCITNVESTTFCFAAIGRAGGHYVSLNPFPEHAA----TRKMVTTDWTLGPTIF 286

Query: 298 G---NYKPRTDLPSVVDM---------YMNKQLELEKFITHRIP-----FSEINKAFEYM 340
           G    +      P   +             + +E  + + H +      F  I +  E +
Sbjct: 287 GEGSTWPAPYGRPGSEEERQFGEDLWRIAGQLVEDGRLVHHPLRVVQGGFDHIKQGMELV 346

Query: 341 VKGE 344
            KGE
Sbjct: 347 RKGE 350

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A Length = 364

 Score =  108 bits (272), Expect = 5e-27
 Identities = 66/378 (17%), Positives = 117/378 (30%), Gaps = 75/378 (19%)

Query: 8   ILTCKAAVAWEAGKP---LIIQDVEVAPPQ--AMEVRIKIKYTSLCRTDLYF-------- 54
           ++T +A +  + G+P   L  Q  E+        EV +K   + +  +D+          
Sbjct: 1   MITAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSK 60

Query: 55  --WESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRFSING 112
               +   T       G+E    V  VG  VS LE GD V+P                  
Sbjct: 61  PAKTTGFGTTEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFG------------ 108

Query: 113 EPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNV-------- 164
                     T+  + + +     K+ P     K      G++   GAT++V        
Sbjct: 109 ----------TWRTHALGNDDDFIKL-PNPAQSKANGKPNGLTINQGATISVNPLTAYLM 157

Query: 165 ----AKPERGSSVAVF--GLGAVGLAAAEGARIAGASRIIGVDRSSKRFEE----AKKFG 214
                K   G    +   G  AVG  A++  ++      I V R     +E     K+ G
Sbjct: 158 LTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNF-NSISVIRDRPNLDEVVASLKELG 216

Query: 215 VTDFVNTSEHD-RPIQEVIAEMTN---GGVDRSVECTGNIDNMISAFECVHDGWGVAVLV 270
            T  +   +++ R     I E      G    ++ C G   +       +++  G+ +  
Sbjct: 217 ATQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGG-KSSTGIARKLNNN-GLMLTY 274

Query: 271 GVPSKDAVFMTKPINVL--NERTLKGTFFGNYKPRT------DLPSVVDMYMNKQLELEK 322
           G  S   V  T P ++      T  G +               L  ++  Y   +L    
Sbjct: 275 GGMSFQPV--TIPTSLYIFKNFTSAGFWVTELLKNNKELKTSTLNQIIAWYEEGKLTDA- 331

Query: 323 FITHRIPFSEINKAFEYM 340
             +    +       E  
Sbjct: 332 -KSIETLYDGTKPLHELY 348

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} Length = 340

 Score =  105 bits (264), Expect = 6e-26
 Identities = 66/353 (18%), Positives = 118/353 (33%), Gaps = 49/353 (13%)

Query: 1   MSSTAGLILTCKAAVAWEAGKP---LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWES 57
           MS         K     + G P   L ++   + P +  EV +++    +  +DL     
Sbjct: 1   MSLHG------KLIQFHKFGNPKDVLQVEYKNIEPLKDNEVFVRMLVRPINPSDLIPITG 54

Query: 58  K-GQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVN 116
                   P I G+E  G+VE+VG  VS   +G  VLP                      
Sbjct: 55  AYAHRIPLPNIPGYEGVGIVENVGAFVSRELIGKRVLP---------------------- 92

Query: 117 HFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVF 176
              G  T+ EY    +  V  I           +     T           +R   + V 
Sbjct: 93  -LRGEGTWQEYVKTSADFVVPIPDSIDDFTAAQMYINPLTAWVTCTETLNLQRNDVLLVN 151

Query: 177 G-LGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEM 235
               A+G   A+ ++I    R+I V R++K  EE  + G    ++TS       E + E+
Sbjct: 152 ACGSAIGHLFAQLSQILNF-RLIAVTRNNKHTEELLRLGAAYVIDTSTAPLY--ETVMEL 208

Query: 236 TNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKG 294
           TNG G D +++  G   +       +    G  + +G+ S         I    +     
Sbjct: 209 TNGIGADAAIDSIGG-PDGNELAFSLRPN-GHFLTIGLLSG-IQVNWAEIVTKAKVHANI 265

Query: 295 TFFGNYKPRTD-------LPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYM 340
               ++               ++ +  N+QL   K +      +++  A + +
Sbjct: 266 FHLRHWNDEVSPYKWQETFRHLIRLVENEQLRFMK-VHSTYELADVKAAVDVV 317

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A Length = 360

 Score =   99 bits (250), Expect = 7e-24
 Identities = 79/376 (21%), Positives = 128/376 (34%), Gaps = 88/376 (23%)

Query: 13  AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEA 72
           A  + E  K       +  P    ++ IKI+   +C +D++           P + GHE 
Sbjct: 11  AIQSHEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGNMKMPLVVGHEI 70

Query: 73  AGVVESVGEGV-SDLEVGDHV-LPVFTGECGDCRHCR-----------FSINGEPVNHFL 119
            G V  +G    S L+VG  V +      C +C  C+            + +    +   
Sbjct: 71  VGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYED--- 127

Query: 120 GTST---FSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATL------NVAKPERG 170
           G  +   ++ Y  VH   V  I    P      L CG     G T+      N   P  G
Sbjct: 128 GYVSQGGYANYVRVHEHFVVPIPENIPSHLAAPLLCG-----GLTVYSPLVRNGCGP--G 180

Query: 171 SSVAVFGLG-----AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHD 225
             V + GLG        ++ A GA     SR      S KR E+A K G   ++ T E  
Sbjct: 181 KKVGIVGLGGIGSMGTLISKAMGAETYVISR-----SSRKR-EDAMKMGADHYIATLEE- 233

Query: 226 RPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGW-----------GVAVLVGVPS 274
                   +          +     D ++     + D             G  V + +P 
Sbjct: 234 -------GDWGE-------KYFDTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPE 279

Query: 275 KDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLEL--EKFITH---RIP 329
           +  +   KP   L   ++  +  G+      +  +  +     L+L  EK I      +P
Sbjct: 280 QHEMLSLKPY-GLKAVSISYSALGS------IKELNQL-----LKLVSEKDIKIWVETLP 327

Query: 330 FSE--INKAFEYMVKG 343
             E  +++AFE M KG
Sbjct: 328 VGEAGVHEAFERMEKG 343

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} Length = 321

 Score = 94.2 bits (235), Expect = 5e-22
 Identities = 68/351 (19%), Positives = 116/351 (33%), Gaps = 67/351 (19%)

Query: 12  KAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLY-----FWESKGQTPLF 64
           KA    + G P  L + D      +  ++ IK+   SL   D        + +K      
Sbjct: 8   KAIQFDQFGPPKVLKLVDTPTPEYRKNQMLIKVHAASLNPIDYKTRNGSGFVAKKLKNNL 67

Query: 65  PRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTF 124
           P   G++ +G V  +G  V+++ +GD V        G                      +
Sbjct: 68  PSGLGYDFSGEVIELGSDVNNVNIGDKV-------MGI------------AGFPDHPCCY 108

Query: 125 SEYTVVHSGCVAKI--N---------PLAPLDKVCILSCGVSTGLGATLNVAKPERGSSV 173
           +EY       + +             P A L           T L A LN A+ ++G  V
Sbjct: 109 AEYVCASPDTIIQKLEKLSFLQAASLPTAGL-----------TALQA-LNQAEVKQGDVV 156

Query: 174 AVFG-LGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVI 232
            +    G VG  A + A+  G   +I    S +     K  G    +N  E D       
Sbjct: 157 LIHAGAGGVGHLAIQLAKQKGT-TVITTA-SKRNHAFLKALGAEQCINYHEED------F 208

Query: 233 AEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTL 292
               +  VD  ++  G  D  I + +C+ +  G  V V   +       + I V  ++  
Sbjct: 209 LLAISTPVDAVIDLVGG-DVGIQSIDCLKET-GCIVSVPTITAG-----RVIEVAKQKHR 261

Query: 293 KGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKG 343
           +           +L  +  +    +L +E  I+     SE   A E +  G
Sbjct: 262 RAFGLLKQFNIEELHYLGKLVSEDKLRIE--ISRIFQLSEAVTAHELLETG 310

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} Length = 342

 Score = 91.1 bits (227), Expect = 6e-21
 Identities = 76/342 (22%), Positives = 117/342 (34%), Gaps = 48/342 (14%)

Query: 12  KAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL-FPRIF 68
           KA  A     P  L+  DVE        V + +K   +C  D    + + Q  +  P + 
Sbjct: 23  KAIQAQSLSGPEGLVYTDVETPGAGPNVVVVDVKAAGVCFPDYLMTKGEYQLKMEPPFVP 82

Query: 69  GHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYT 128
           G E AGVV S  EG S ++ GD V                         F     ++E  
Sbjct: 83  GIETAGVVRSAPEG-SGIKPGDRV-------MA----------------FNFIGGYAERV 118

Query: 129 VVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFG-LGAVGLAAAE 187
            V    +    P     +   L     T   A     +   G +V V G  G +G AA +
Sbjct: 119 AVAPSNILPTPPQLDDAEAVALIANYHTMYFAYARRGQLRAGETVLVLGAAGGIGTAAIQ 178

Query: 188 GARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVEC 246
            A+  GA ++I V   +   E  K  G    +   E      + + E T G GVD  V+ 
Sbjct: 179 IAKGMGA-KVIAVVNRTAATEFVKSVGADIVLPLEEGWA---KAVREATGGAGVDMVVDP 234

Query: 247 TGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNER--TLKGTFFGNY---K 301
            G       A   +    G  ++VG  +      T  +N L  R  +L G  +G +    
Sbjct: 235 IGG-PAFDDAVRTLASE-GRLLVVGFAAGGIP--TIKVNRLLLRNASLIGVAWGEFLRTH 290

Query: 302 P---RTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYM 340
                     +  +       +   ++ RIP SE  +A +  
Sbjct: 291 ADYLYETQAGLEKLVAEG---MRPPVSARIPLSEGRQALQDF 329

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* Length = 334

 Score = 90.4 bits (225), Expect = 1e-20
 Identities = 82/347 (23%), Positives = 141/347 (40%), Gaps = 55/347 (15%)

Query: 12  KAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL-FPRIF 68
           K  +  E G    +  +D  V      E+ IK KYT +   + YF   KG  P   P + 
Sbjct: 10  KVILIDEIGGYDVIKYEDYPVPSISEEELLIKNKYTGVNYIESYF--RKGIYPCEKPYVL 67

Query: 69  GHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYT 128
           G EA+G V + G+GV++ EVGD V                         ++  STF++Y+
Sbjct: 68  GREASGTVVAKGKGVTNFEVGDQVA------------------------YISNSTFAQYS 103

Query: 129 VVHS-GCVAKINPLAPLDKVCILSCGVSTGLGA---TLNVAKPERGSSVAVFGL-GAVGL 183
            + S G V K+      +++ + + G+   L A   T      ++G  V +F   G VGL
Sbjct: 104 KISSQGPVMKLPKGTSDEELKLYAAGLLQVLTALSFTNEAYHVKKGDYVLLFAAAGGVGL 163

Query: 184 AAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDR 242
              +  ++ GA   I V  + ++ + AK++G    +N S+ D  I   + + TNG GVD 
Sbjct: 164 ILNQLLKMKGA-HTIAVASTDEKLKIAKEYGAEYLINASKED--ILRQVLKFTNGKGVDA 220

Query: 243 SVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV--LNERTLK---GTFF 297
           S +  G  D    +   +    GV V  G  S     +  P ++  L+ + +       +
Sbjct: 221 SFDSVGK-DTFEISLAALKRK-GVFVSFGNASG----LIPPFSITRLSPKNITLVRPQLY 274

Query: 298 GNYKPRTDL----PSVVDMYMNKQLELEKFITHRIPFSEINKAFEYM 340
           G      +          +  +K+L ++  I    P  +   A   +
Sbjct: 275 GYIADPEEWKYYSDEFFGLVNSKKLNIK--IYKTYPLRDYRTAAADI 319

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens} Length = 349

 Score = 87.7 bits (218), Expect = 1e-19
 Identities = 67/367 (18%), Positives = 113/367 (30%), Gaps = 80/367 (21%)

Query: 12  KAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ---TPLFPR 66
           +A V    G    L +    +  PQ  E++I++K   L   DL     +G     P  P 
Sbjct: 5   RAVVLAGFGGLNKLRLFRKAMPEPQDGELKIRVKACGLNFIDLM--VRQGNIDNPPKTPL 62

Query: 67  IFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSE 126
           + G E +G+VE++G+ V   E+GD V                         F+  + ++E
Sbjct: 63  VPGFECSGIVEALGDSVKGYEIGDRV-------MA----------------FVNYNAWAE 99

Query: 127 YTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATL------------NVAKPERGSSVA 174
                   V KI               +S    A               VA    G SV 
Sbjct: 100 VVCTPVEFVYKIPD------------DMSFSEAAAFPMNFVTAYVMLFEVANLREGMSVL 147

Query: 175 VFG-LGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIA 233
           V    G VG A A+         + G   + K   EA K  VT   + +       + + 
Sbjct: 148 VHSAGGGVGQAVAQLCSTVPNVTVFGTASTFKH--EAIKDSVTHLFDRNADYV---QEVK 202

Query: 234 EMTNGGVD------------RSVECTGNIDNMIS-AFECVHDGWGVAVLVGVPSKDAVFM 280
            ++  GVD            + +     +   I      +  G   +      S   V  
Sbjct: 203 RISAEGVDIVLDCLCGDNTGKGLSLLKPLGTYILYGSSNMVTGETKSFFSFAKSWWQVEK 262

Query: 281 TKPINVLNER-TLKGTFFGNYKPRTDLPSVVDMYMNKQLELEK------FITHRIPFSEI 333
             PI +  E   + G    N   +     ++   + K + L         +       E+
Sbjct: 263 VNPIKLYEENKVIAGFSLLNLLFKQGRAGLIRGVVEKLIGLYNQKKIKPVVDSLWALEEV 322

Query: 334 NKAFEYM 340
            +A + +
Sbjct: 323 KEAMQRI 329

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 327

 Score = 87.3 bits (217), Expect = 1e-19
 Identities = 53/246 (21%), Positives = 82/246 (33%), Gaps = 53/246 (21%)

Query: 12  KAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFG 69
                 + G P  L   +   A P   E++++ K   +   D Y        P  P   G
Sbjct: 3   TRIEFHKHGGPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPPPSLPSGLG 62

Query: 70  HEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTV 129
            EAAG+V  VG GV  ++ GD V  V+                           +S    
Sbjct: 63  TEAAGIVSKVGSGVKHIKAGDRV--VYAQ--------------------SALGAYSSVHN 100

Query: 130 VHSGCVAKINPLAPLDKVCILSCGVSTGLGATL------------NVAKPERGSSVAVFG 177
           +              DK  IL   +S    A                 + +         
Sbjct: 101 I------------IADKAAILPAAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHA 148

Query: 178 L-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMT 236
             G VGL A + A+  GA ++IG   ++++ + A K G    +N  E D  + E + E+T
Sbjct: 149 AAGGVGLIACQWAKALGA-KLIGTVGTAQKAQSALKAGAWQVINYREED--LVERLKEIT 205

Query: 237 NG-GVD 241
            G  V 
Sbjct: 206 GGKKVR 211

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* Length = 325

 Score = 85.7 bits (213), Expect = 4e-19
 Identities = 78/362 (21%), Positives = 126/362 (34%), Gaps = 85/362 (23%)

Query: 12  KAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFG 69
           K       G P  L   D E   P    V ++ K   L   D Y+       P  P   G
Sbjct: 3   KRIQFSTVGGPEVLEYVDFEPEAPGPQAVVVRNKAIGLNFIDTYYRSGLYPAPFLPSGLG 62

Query: 70  HEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTV 129
            E AGVVE+VG+ V+  +VGD V    TG  G                      +SE  V
Sbjct: 63  AEGAGVVEAVGDEVTRFKVGDRVA-YGTGPLG---------------------AYSEVHV 100

Query: 130 VHSGCVAKINPLAPLDKVCILSCGVSTGLGATL------------NVAKPERGSSVAVFG 177
           +            P   +  L+  VS    A L               + + G  +    
Sbjct: 101 L------------PEANLVKLADSVSFEQAAALMLKGLTVQYLLRQTYQVKPGEIILFHA 148

Query: 178 L-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMT 236
             G VG  A + A+  GA ++IG   S ++   AK  G  + ++ S  D  + + + E+T
Sbjct: 149 AAGGVGSLACQWAKALGA-KLIGTVSSPEKAAHAKALGAWETIDYSHED--VAKRVLELT 205

Query: 237 NG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS-------------KDAVFMTK 282
           +G       +  G  D  +++ + V    G+ V  G  S             KD+V++T+
Sbjct: 206 DGKKCPVVYDGVGQ-DTWLTSLDSVAPR-GLVVSFGNASGPVSGVNLGILAQKDSVYVTR 263

Query: 283 PINVLNERTLKGTFFGNYKPRTDL----PSVVDMYMNKQLELEKFITHRIPFSEINKAFE 338
           P           T         +L      + DM  + +L+++     +    +  KA  
Sbjct: 264 P-----------TLGSYANNAQNLQTMADELFDMLASGKLKVD--GIEQYALKDAAKAQI 310

Query: 339 YM 340
            +
Sbjct: 311 EL 312

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} Length = 349

 Score = 85.4 bits (212), Expect = 8e-19
 Identities = 47/329 (14%), Positives = 105/329 (31%), Gaps = 40/329 (12%)

Query: 23  LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESK-GQTPLFPRIFGHEAAGVVESVGE 81
           L    + V  P   +V IK+   S+  +D+ F + + GQ  +  R  G E  G + + G+
Sbjct: 37  LEQGRIAVPAPGPSQVLIKVNLASINPSDVAFIKGQYGQPRVKGRPAGFEGVGTIVAGGD 96

Query: 82  GV-SDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINP 140
              +   VG  V                S  G          +++EY V  +     +  
Sbjct: 97  EPYAKSLVGKRV----------AFATGLSNWG----------SWAEYAVAEAAACIPLLD 136

Query: 141 LAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFG-LGAVGLAAAEGARIAGASRIIG 199
               +    +     T +    ++ K E   +  +      +       A+  G  R I 
Sbjct: 137 TVRDEDGAAMIVNPLTAIAM-FDIVKQEGEKAFVMTAGASQLCKLIIGLAKEEGF-RPIV 194

Query: 200 VDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFE 258
             R  ++    K  G    +N    D   +  + E+         ++         + F 
Sbjct: 195 TVRRDEQIALLKDIGAAHVLNEKAPD--FEATLREVMKAEQPRIFLDAVTG-PLASAIFN 251

Query: 259 CVHDGWGVAVLVGVPSKDAVFMTKPINVLNER-TLKGTFFGNYKPRT------DLPSVVD 311
            +       ++ G    DA  + +P  ++ +   ++G +   +  +        +     
Sbjct: 252 AMPKR-ARWIIYGRLDPDATVIREPGQLIFQHKHIEGFWLSEWMRQFKERRGPAILEAQK 310

Query: 312 MYMNKQLELEKFITHRIPFSEINKAFEYM 340
            + + +   +  +T  +P +E   A+   
Sbjct: 311 RFSDGRWSTD--VTAVVPLAEA-IAWVPA 336

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis} Length = 315

 Score = 84.6 bits (210), Expect = 8e-19
 Identities = 46/362 (12%), Positives = 98/362 (27%), Gaps = 85/362 (23%)

Query: 12  KAAVAWEAGKP---LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIF 68
           +    W        + +  V++    A ++ ++ +   +   D  F ++         + 
Sbjct: 3   EQHQVWAYQTKTHSVTLNSVDIPALAADDILVQNQAIGINPVDWKFIKANPINWSNGHVP 62

Query: 69  GHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYT 128
           G + AGV+  VG  V    +G     V         H     +G          +F+E+T
Sbjct: 63  GVDGAGVIVKVGAKVDSKMLGR---RVAY-------HTSLKRHG----------SFAEFT 102

Query: 129 VVHSGCVAKINPLA---------PLDKVCILSCGVSTGLGA--TLNVAKPERGSSVAVFG 177
           V+++  V  + P           P              L A          +   V + G
Sbjct: 103 VLNTDRVMTL-PDNLSFERAAALPC-----------PLLTAWQAFEKIPLTKQREVLIVG 150

Query: 178 LGAVG-----LAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVI 232
            GAV      +    G  +   S       +S     A K GV   +        + +  
Sbjct: 151 FGAVNNLLTQMLNNAGYVVDLVS-------ASLSQALAAKRGV-RHLY--REPSQVTQ-- 198

Query: 233 AEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD-AVFMTKPINVLNERT 291
                       +   +  N  +    +     +  +            T+ I      +
Sbjct: 199 ------KYFAIFDAVNS-QNAAALVPSLKANGHIICIQDRIPAPIDPAFTRTI------S 245

Query: 292 LKGTFFGNYKPRTDLPSVVDMYMN-KQL-------ELEKFITHRIPFSEINKAFEYMVKG 343
                 G      D      +    + L       ++E        F ++ +A ++  + 
Sbjct: 246 YHEIALGALHDFGDRQDWQILMQQGEALLTLIAQGKMEIAAPDIFRFEQMIEALDHSEQT 305

Query: 344 EG 345
           + 
Sbjct: 306 KL 307

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} Length = 333

 Score = 83.8 bits (208), Expect = 2e-18
 Identities = 80/351 (22%), Positives = 128/351 (36%), Gaps = 57/351 (16%)

Query: 12  KAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYF----WESKGQTPLFP 65
            AAV  + G P   + ++V+V  P   +VR++     +   D Y               P
Sbjct: 3   MAAVIHKKGGPDNFVWEEVKVGSPGPGQVRLRNTAIGVNFLDTYHRAGIPHPLVVGEP-P 61

Query: 66  RIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFS 125
            + G EAA VVE VG GV+D  VG+ V                               +S
Sbjct: 62  IVVGFEAAAVVEEVGPGVTDFTVGERV--CTCLP--------------------PLGAYS 99

Query: 126 EYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGA---TLNVAKPERGSSVAVFGL-GAV 181
           +  +  +  + K+     LD V +    +  G+ A        K + G  V +    G +
Sbjct: 100 QERLYPAEKLIKVPKDLDLDDVHLAGLMLK-GMTAQYLLHQTHKVKPGDYVLIHAAAGGM 158

Query: 182 GLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GV 240
           G      AR  GA  +IG   + ++ E A+K G    +N S  D    EV+ E+T G GV
Sbjct: 159 GHIMVPWARHLGA-TVIGTVSTEEKAETARKLGCHHTINYSTQD--FAEVVREITGGKGV 215

Query: 241 DRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFF--- 297
           D   +  G  D +  + +C+    G+    G  S     +  PI V+ +  ++G+ F   
Sbjct: 216 DVVYDSIGK-DTLQKSLDCLRPR-GMCAAYGHASG----VADPIRVVEDLGVRGSLFITR 269

Query: 298 ---GNYKPRTDL-----PSVVDMYMNKQLELEKFITHRIPFSEINKAFEYM 340
               +Y             + D      L     +    P  E   A +YM
Sbjct: 270 PALWHYMSNRSEIDEGSKCLFDAVKAGVLHSS--VAKTFPLREAAAAHKYM 318

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* Length = 362

 Score = 82.3 bits (204), Expect = 8e-18
 Identities = 61/344 (17%), Positives = 118/344 (34%), Gaps = 55/344 (15%)

Query: 23  LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ---TPLFPRIFGHEAAGVVESV 79
            + +D  V  P   ++ ++ ++  +  +D+ +  S G+   +   P   G E  G V ++
Sbjct: 41  TLSRDCPVPLPGDGDLLVRNRFVGVNASDINY--SAGRYDPSVKPPFDIGFEGIGEVVAL 98

Query: 80  GEGVS-DLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKI 138
           G   S    VG  V                         ++   +F+EYTVV +     +
Sbjct: 99  GLSASARYTVGQAVA------------------------YMAPGSFAEYTVVPASIATPV 134

Query: 139 NPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFG-LGAVGLAAAEGARIAGASRI 197
            P    + + +L  G  T   +   +     G  V V    G  G  A + ++ A    +
Sbjct: 135 -PSVKPEYLTLLVSGT-TAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKC-HV 191

Query: 198 IGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAF 257
           IG   S ++    K  G    +N       +  V+ +    GVD   E  G       A 
Sbjct: 192 IGTCSSDEKSAFLKSLGCDRPINYKTEP--VGTVLKQEYPEGVDVVYESVGG-AMFDLAV 248

Query: 258 ECVHDGWGVAVLVG--------VPSKDAVFMTKPINVLNER-TLKGTFFGNYKPRTD--L 306
           + +    G  +++G                 T P  +L +  +++G F  +Y  +    +
Sbjct: 249 DALATK-GRLIVIGFISGYQTPTGLSPVKAGTLPAKLLKKSASVQGFFLNHYLSKYQAAM 307

Query: 307 PSVVDMYMNKQL------ELEKFITHRIPFSEINKAFEYMVKGE 344
             +++M ++  L                    I +A  YM  G+
Sbjct: 308 SHLLEMCVSGDLVCEVDLGDLSPEGRFTGLESIFRAVNYMYMGK 351

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 Length = 351

 Score = 82.2 bits (204), Expect = 9e-18
 Identities = 63/311 (20%), Positives = 111/311 (35%), Gaps = 61/311 (19%)

Query: 12  KAAVAWEAGKP---LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL-FPRI 67
           +A   +E G P    +  D+ V  P+  +V IK+    +   + Y            P  
Sbjct: 31  RAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYT 90

Query: 68  FGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEY 127
            G + AGV+E+VG+  S  + GD V                +I+G           ++EY
Sbjct: 91  PGSDVAGVIEAVGDNASAFKKGDRVF------------TSSTISG----------GYAEY 128

Query: 128 TVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATL---------NV---AKPERGSSVAV 175
            +     V K+               +    GA +          +   A  + G SV V
Sbjct: 129 ALAADHTVYKLPE------------KLDFKQGAAIGIPYFTAYRALIHSACVKAGESVLV 176

Query: 176 FG-LGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAE 234
            G  G VGLAA + AR  G  +I+G   + +  +   + G  +  N  E +    + I +
Sbjct: 177 HGASGGVGLAACQIARAYGL-KILGTAGTEEGQKIVLQNGAHEVFNHREVN--YIDKIKK 233

Query: 235 MTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNER-TL 292
                G+D  +E   N  N+      +  G G  ++VG      +    P + + +  ++
Sbjct: 234 YVGEKGIDIIIEMLAN-VNLSKDLSLLSHG-GRVIVVGSRGTIEIN---PRDTMAKESSI 288

Query: 293 KGTFFGNYKPR 303
            G    +    
Sbjct: 289 IGVTLFSSTKE 299

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} Length = 343

 Score = 76.9 bits (190), Expect = 6e-16
 Identities = 66/303 (21%), Positives = 102/303 (33%), Gaps = 64/303 (21%)

Query: 12  KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL----FPRI 67
            AAV  EA  P +++ +    P   +V ++I+ +     D       G+ P      P I
Sbjct: 9   IAAVVEEANGPFVLRKLARPQPAPGQVLVQIEASGTNPLDAKI--RAGEAPHAQQPLPAI 66

Query: 68  FGHEAAGVVESVGEGVSDLEVGDHV---LPVFTGECGDCRHCRFSINGEPVNHFLGTSTF 124
            G + AG V +VG  V    VGD V        G  G                     T 
Sbjct: 67  LGMDLAGTVVAVGPEVDSFRVGDAVFGLTGGVGGLQG---------------------TH 105

Query: 125 SEYTVVHSGCVAKI-----------NPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSV 173
           +++  V +  +A              PL  +           T     ++ A+ + G +V
Sbjct: 106 AQFAAVDARLLASKPAALTMRQASVLPLVFI-----------TAWEGLVDRAQVQDGQTV 154

Query: 174 AVFGLGA--VGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEV 231
            + G G   VG  A + A   GA R+    R S   E  +  G T    + E +    + 
Sbjct: 155 LIQG-GGGGVGHVAIQIALARGA-RVFATARGSDL-EYVRDLGATPIDASREPE----DY 207

Query: 232 IAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD-AVFMTKPINVLNE 289
            AE T G G D   +  G    + ++F  V     V   +G  +   A    K       
Sbjct: 208 AAEHTAGQGFDLVYDTLGG-PVLDASFSAVKRFGHVVSCLGWGTHKLAPLSFKQATYSGV 266

Query: 290 RTL 292
            TL
Sbjct: 267 FTL 269

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} Length = 353

 Score = 76.5 bits (189), Expect = 8e-16
 Identities = 53/249 (21%), Positives = 82/249 (32%), Gaps = 60/249 (24%)

Query: 12  KAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL---FPR 66
           +       G P  ++I    +      EV ++ +   + R D+   + +G  P       
Sbjct: 30  RFVDLKSFGGPDVMVIGKRPLPVAGEGEVLVRAEAIGVNRPDI--AQRQGSYPPPKDASP 87

Query: 67  IFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSE 126
           I G E +G +  VG GVS   VGD V       CG                      ++E
Sbjct: 88  ILGLELSGEIVGVGPGVSGYAVGDKV-------CG----------------LANGGAYAE 124

Query: 127 YTVVHSGCVAKINPLAPLDKVCILSCGVS---------TGLGATLNV---AKPERGSSVA 174
           Y ++ +G +                 G           T      N+   A    G SV 
Sbjct: 125 YCLLPAGQILPFPK------------GYDAVKAAALPETFFTVWANLFQMAGLTEGESVL 172

Query: 175 VFGLGA--VGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVI 232
           + G G   +G  A + AR  GA  +     S+ + E  ++ G    +N    D     VI
Sbjct: 173 IHG-GTSGIGTTAIQLARAFGA-EVYATAGSTGKCEACERLGAKRGINYRSED--FAAVI 228

Query: 233 AEMTNGGVD 241
              T  GVD
Sbjct: 229 KAETGQGVD 237

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli} Length = 363

 Score = 76.6 bits (189), Expect = 9e-16
 Identities = 55/317 (17%), Positives = 103/317 (32%), Gaps = 57/317 (17%)

Query: 12  KAAVAWEAGK-----PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPR 66
           KA    +         L+  ++    P   ++ +++K  S+   D     S        +
Sbjct: 24  KAVGYNKPAPITDDASLLDIELPKPAPAGHDILVEVKAVSVNPVDYKVRRSTPPDGTDWK 83

Query: 67  IFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSE 126
           + G++AAG+V +VG  V+    GD    VF    G                 +   T +E
Sbjct: 84  VIGYDAAGIVSAVGPDVTLFRPGDE---VFY--AGS---------------IIRPGTNAE 123

Query: 127 YTVVHSGCVAKI-----------NPLAPLDKVCILSCGVST---GLGATLNVAKPERGSS 172
           + +V    V +             PL  +           T        L+V KP  G++
Sbjct: 124 FHLVDERIVGRKPKTLDWAEAAALPLTSI-----------TAWEAFFDRLDVNKPVPGAA 172

Query: 173 VAVFGLGA---VGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQ 229
            A+  +G    VG  A + AR      +I      +  E  K  G    ++   H +P+ 
Sbjct: 173 PAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSLGAHHVID---HSKPLA 229

Query: 230 EVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD-AVFMTKPINVLN 288
             +A +  G        T    +     + +       ++    + D  +F  K +++ +
Sbjct: 230 AEVAALGLGAPAFVFSTTHTDKHAAEIADLIAPQGRFCLIDDPSAFDIMLFKRKAVSIHH 289

Query: 289 ERTLKGTFFGNYKPRTD 305
           E       FG       
Sbjct: 290 ELMFTRPMFGTPDMSEQ 306

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha} Length = 379

 Score = 75.0 bits (184), Expect = 3e-15
 Identities = 37/283 (13%), Positives = 75/283 (26%), Gaps = 80/283 (28%)

Query: 23  LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYF---------------------------- 54
           L +  ++   P   EV I+I+ + L  +DL                              
Sbjct: 20  LSLDSIDTPHPGPDEVLIRIEASPLNPSDLGLLFGAADMSTAKASGTAERPIVTARVPEG 79

Query: 55  -WESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRFSINGE 113
              S           G+E AGVV   G   +   +    +                    
Sbjct: 80  AMRSMAGRLDASMPVGNEGAGVVVEAGSSPAAQALMGKTV-------------------- 119

Query: 114 PVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNV--------- 164
                +G + +S+Y  + +     +              G +   GA+  V         
Sbjct: 120 ---AAIGGAMYSQYRCIPADQCLVLPE------------GATPADGASSFVNPLTALGMV 164

Query: 165 --AKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT 221
              + E  S++        +G    +     G  +++ + R  ++ +  K  G     N 
Sbjct: 165 ETMRLEGHSALVHTAAASNLGQMLNQICLKDGI-KLVNIVRKQEQADLLKAQGAVHVCNA 223

Query: 222 SEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDG 263
           +       + + E     G   + + TG          C+   
Sbjct: 224 ASPT--FMQDLTEALVSTGATIAFDATGGGKLGGQILTCMEAA 264

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* Length = 354

 Score = 71.1 bits (175), Expect = 6e-14
 Identities = 56/251 (22%), Positives = 87/251 (34%), Gaps = 62/251 (24%)

Query: 12  KAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL---FPR 66
            A    + G P  L +++V    P   EV +K+  ++L R DL   + +GQ         
Sbjct: 24  LAVHFDKPGGPENLYVKEVAKPSPGEGEVLLKVAASALNRADL--MQRQGQYDPPPGASN 81

Query: 67  IFGHEAAGVVESVGEGV-SDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFS 125
           I G EA+G V  +G G     ++GD                            L     +
Sbjct: 82  ILGLEASGHVAELGPGCQGHWKIGDTA-------MA----------------LLPGGGQA 118

Query: 126 EYTVVHSGCVAKINPLAPLDKVCILSCGVS---------TGLGATLNV---AKPERGSSV 173
           +Y  V  G +  I              G++           L A   +      + G  V
Sbjct: 119 QYVTVPEGLLMPIPE------------GLTLTQAAAIPEAWLTAFQLLHLVGNVQAGDYV 166

Query: 174 AVFGLGA--VGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEV 231
            +   G   VG AA +  R+AGA   +    S K+ + A+K G     N  + D    E 
Sbjct: 167 LIHA-GLSGVGTAAIQLTRMAGA-IPLVTAGSQKKLQMAEKLGAAAGFNYKKED--FSEA 222

Query: 232 IAEMTNG-GVD 241
             + T G GV+
Sbjct: 223 TLKFTKGAGVN 233

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} Length = 795

 Score = 71.3 bits (175), Expect = 1e-13
 Identities = 49/224 (21%), Positives = 73/224 (32%), Gaps = 40/224 (17%)

Query: 23  LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEG 82
           L+ +    AP    EVRI ++   +   D     + G  P      G E AGVV   G G
Sbjct: 226 LVDEPTATAPLGDGEVRIAMRAAGVNFRDALI--ALGMYPG-VASLGSEGAGVVVETGPG 282

Query: 83  VSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLA 142
           V+ L  GD V+ +                            F    V     V +I    
Sbjct: 283 VTGLAPGDRVMGMIPK------------------------AFGPLAVADHRMVTRIPAGW 318

Query: 143 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAV-FGLGAVGLAAAEGARIAGASRIIGVD 201
              +   +     T   A +++A    G S+ V    G VG+AA + AR  GA  +    
Sbjct: 319 SFARAASVPIVFLTAYYALVDLAGLRPGESLLVHSAAGGVGMAAIQLARHLGA-EVYATA 377

Query: 202 RSSKRFEEAKKFGVTD---FVNTSEHDRPIQEVIAEMTNG-GVD 241
              K     +   ++        S      ++     T G GVD
Sbjct: 378 SEDKW----QAVELSREHLA---SSRTCDFEQQFLGATGGRGVD 414

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} Length = 375

 Score = 69.4 bits (170), Expect = 2e-13
 Identities = 64/380 (16%), Positives = 106/380 (27%), Gaps = 86/380 (22%)

Query: 12  KAAVAWEAGKP---LIIQDVEV-APPQAMEVRIKIKYTSLCRTDLY-------------- 53
            A V  + GK       Q++ +       EV +K+   S+   D+               
Sbjct: 23  MAWVIDKYGKNEVLRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNMKR 82

Query: 54  -FWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRFSING 112
                K +   FP   G + +GVV   G  V   + GD V               ++   
Sbjct: 83  DPLHVKIKGEEFPLTLGRDVSGVVMECGLDVKYFKPGDEV---------------WAAVP 127

Query: 113 EPVNHFLGTSTFSEYTVVHSGCVAKI--N---------PLAPLDKVCILSCGVSTGLGAT 161
                     T SE+ VV    V+    +         P   L           T   A 
Sbjct: 128 -----PWKQGTLSEFVVVSGNEVSHKPKSLTHTQAASLPYVAL-----------TAWSAI 171

Query: 162 LNVAK----PERGSSVAVFG-LGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT 216
             V         G  V + G  G VG  A +  +   A  +  V  S    E  +K G  
Sbjct: 172 NKVGGLNDKNCTGKRVLILGASGGVGTFAIQVMKAWDA-HVTAVC-SQDASELVRKLGAD 229

Query: 217 DFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD 276
           D ++       ++E +  +     D  ++  G       A + +    G   +  V    
Sbjct: 230 DVIDYKSGS--VEEQLKSL--KPFDFILDNVGG-STETWAPDFLKKWSGATYVTLVTPFL 284

Query: 277 AVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMN---KQLE----------LEKF 323
                  I     +T         K           +       L+          +   
Sbjct: 285 LNMDRLGIADGMLQTGVTVGSKALKHFWKGVHYRWAFFMASGPCLDDIAELVDAGKIRPV 344

Query: 324 ITHRIPFSEINKAFEYMVKG 343
           I    PFS++ +AF  + +G
Sbjct: 345 IEQTFPFSKVPEAFLKVERG 364

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} Length = 346

 Score = 68.8 bits (169), Expect = 3e-13
 Identities = 67/368 (18%), Positives = 115/368 (31%), Gaps = 80/368 (21%)

Query: 12  KAAVAWEAGK-----PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPR 66
           KA    +  K          ++++  P+  E+ +KI+  S+   D    +        PR
Sbjct: 4   KAIGFEQPFKLSDGNLFKTFNLDIPEPKVHEILVKIQSISVNPVD--TKQRLMDVSKAPR 61

Query: 67  IFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSE 126
           + G +A GVVESVG  V+    GD V   +    G         NG          + +E
Sbjct: 62  VLGFDAIGVVESVGNEVTMFNQGDIV---YY--SGS-----PDQNG----------SNAE 101

Query: 127 YTVVHSGCVAKI--N---------PLAPLDKVCILSCGVST---GLGATLNVAKPER--- 169
           Y +++   VAK   N         PL  +           T    L     +++      
Sbjct: 102 YQLINERLVAKAPKNISAEQAVSLPLTGI-----------TAYETLFDVFGISRNRNENE 150

Query: 170 GSSVAVF-GLGAVG-----LAAAEGAR-IAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS 222
           G ++ +  G G VG     +A A G R I  ASR       ++  E  KK G    +N  
Sbjct: 151 GKTLLIINGAGGVGSIATQIAKAYGLRVITTASR-------NETIEWTKKMGADIVLN-- 201

Query: 223 EHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAV--FM 280
            H   +           VD                + V     +A +V   +   +    
Sbjct: 202 -HKESLLNQFKTQGIELVDYVFCTFNTDMYYDDMIQLVKPRGHIATIVAFENDQDLNALK 260

Query: 281 TKPINVLNERTLKGTFFGNYKPRTD---LPSVVDMYMNKQLE--LEKFITHRIPFSEINK 335
            K ++  +E                   L  + +       +    K +   +    I +
Sbjct: 261 PKSLSFSHEFMFARPLNQTDDMIKHHEYLEDITNKVEQNIYQPTTTK-VIEGLTTENIYQ 319

Query: 336 AFEYMVKG 343
           A + +   
Sbjct: 320 AHQILESN 327

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D Length = 302

 Score = 64.5 bits (158), Expect = 7e-12
 Identities = 44/233 (18%), Positives = 67/233 (28%), Gaps = 46/233 (19%)

Query: 12  KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL-FPRIFGH 70
           KA V    G PL + D+     +  EV ++++   L   D         T L  P I G 
Sbjct: 2   KAWVLKRLGGPLELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFIPGM 61

Query: 71  EAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVV 130
           E  GVV            G                             +     +E   V
Sbjct: 62  EVVGVV-----------EGRRY-------AA----------------LVPQGGLAERVAV 87

Query: 131 HSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFG-LGAVGLAAAEGA 189
             G +  +      ++         T   A L  A+   G  V V    GA+G AA + A
Sbjct: 88  PKGALLPLPEGLSPEEAAAFPVSFLTAYLA-LKRAQARPGEKVLVQAAAGALGTAAVQVA 146

Query: 190 RIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVD 241
           R  G  R++      ++       G  +    +E                G+D
Sbjct: 147 RAMGL-RVLAAASRPEKLALPLALGAEEAATYAEVPE-------RAKAWGGLD 191

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Length = 2512

 Score = 46.8 bits (111), Expect = 8e-06
 Identities = 36/214 (16%), Positives = 67/214 (31%), Gaps = 29/214 (13%)

Query: 31   APPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD 90
             P    +    + YTSL   D+    + G+      I G           E       G 
Sbjct: 1555 LPASCQDRLCSVYYTSLNFRDVML--ATGKLSP-DSIPGKWLTRDCMLGMEFSGRDASGR 1611

Query: 91   HVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCIL 150
             V+ +   E                         +   ++      ++     L++   +
Sbjct: 1612 RVMGMVPAEG-----------------------LATSVLLLQHATWEVPSTWTLEEAASV 1648

Query: 151  SCGVSTGLGATLNVAKPERGSSVAVF-GLGAVGLAAAEGARIAGASRIIGVDRSSKR-FE 208
                +T   + +   + + G SV +  G G VG AA   A   G      V  + KR + 
Sbjct: 1649 PIVYTTAYYSLVVRGRMQPGESVLIHSGSGGVGQAAIAIALSRGCRVFTTVGSAEKRAYL 1708

Query: 209  EAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVD 241
            +A+   + +    +  D   ++ +   T G GVD
Sbjct: 1709 QARFPQLDETCFANSRDTSFEQHVLRHTAGKGVD 1742

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 Length = 328

 Score = 40.4 bits (95), Expect = 6e-04
 Identities = 46/253 (18%), Positives = 81/253 (32%), Gaps = 53/253 (20%)

Query: 25  IQDVEVAPPQAMEVRIKIKYTSLCRTD-LYFWESKGQTPLFPRIFGHEAAGVVESVGEGV 83
           +Q + +      +V +++ Y+S+   D L           +P + G + AGVV S     
Sbjct: 20  VQTISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGKIVKTYPFVPGIDLAGVVVS--SQH 77

Query: 84  SDLEVGDHVLPVFTGECGDCRHCRFSINGEPV--NHFLGTSTFSEYTVVHSGCVAKI-NP 140
                GD V+                  G  +   HF G   +SEY  +H   +  +   
Sbjct: 78  PRFREGDEVI----------------ATGYEIGVTHFGG---YSEYARLHGEWLVPLPKG 118

Query: 141 LAPLDKVCILSCGVSTGLGA---TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRI 197
           L   + + I + G +  L       +   PERG  +     G VG  A       G   +
Sbjct: 119 LTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGY-TV 177

Query: 198 IGVDRSSKRFEEAKKFGVTDFVNTSEHD----RPIQ-----------------EVIAEMT 236
                 +   +  +  G  + +   +      RP+                   V++ M 
Sbjct: 178 EASTGKAAEHDYLRVLGAKEVLAREDVMAERIRPLDKQRWAAAVDPVGGRTLATVLSRMR 237

Query: 237 NGGVDRSVECTGN 249
            GG    V  +G 
Sbjct: 238 YGGA---VAVSGL 247

>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A* Length = 355

 Score = 39.8 bits (94), Expect = 9e-04
 Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 3/66 (4%)

Query: 153 GVSTGLGATLNVAKPE--RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA 210
           GV   + AT+         G +V V GLGAVG + A  A  AGA +++  D  ++R   A
Sbjct: 156 GVFEAMKATVAHRGLGSLDGLTVLVQGLGAVGGSLASLAAEAGA-QLLVADTDTERVAHA 214

Query: 211 KKFGVT 216
              G T
Sbjct: 215 VALGHT 220

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	354
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	100.0
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	100.0
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	100.0
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	100.0
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	100.0
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	100.0
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	100.0
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	100.0
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	100.0
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	100.0
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	100.0
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	100.0
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	100.0
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	100.0
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	100.0
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	100.0
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	100.0
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	100.0
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	100.0
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	100.0
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	100.0
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	100.0
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	100.0
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	100.0
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	100.0
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	100.0
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	100.0
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	100.0
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	100.0
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	100.0
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	100.0
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	100.0
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	100.0
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	100.0
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	100.0
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	100.0
4eye_A	342	Probable oxidoreductase; structural genomics, niai	100.0
3gms_A	340	Putative NADPH:quinone reductase; structural genom	100.0
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	100.0
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	100.0
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	100.0
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	100.0
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	100.0
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	100.0
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	100.0
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	100.0
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	100.0
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	100.0
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	100.0
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	100.0
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	100.0
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	100.0
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	100.0
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	100.0
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	100.0
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	100.0
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	100.0
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	100.0
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	100.0
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	100.0
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	100.0
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	100.0
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	100.0
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	100.0
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	100.0
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	100.0
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	100.0
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	100.0
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	100.0
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	100.0
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	99.9
2yvl_A	248	TRMI protein, hypothetical protein; tRNA, methyltr	99.2
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	99.12
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	98.71
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	98.69
3ce6_A	494	Adenosylhomocysteinase; protein-substrate complex,	98.54
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	98.54
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	98.53
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.45
1o54_A	277	SAM-dependent O-methyltransferase; TM0748, structu	98.35
3fpf_A	298	Mtnas, putative uncharacterized protein; thermonic	98.3
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	98.21
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	98.19
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	98.18
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	98.16
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	98.11
1p91_A	269	Ribosomal RNA large subunit methyltransferase A; R	98.1
3gvp_A	435	Adenosylhomocysteinase 3; protein CO-factor comple	98.04
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.94
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	97.91
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.89
2b25_A	336	Hypothetical protein; structural genomics, methyl	97.89
1i9g_A	280	Hypothetical protein RV2118C; mtase, adoMet, cryst	97.82
3n58_A	464	Adenosylhomocysteinase; ssgcid, hydrolase, structu	97.8
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	97.77
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	97.77
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	97.77
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	97.73
3njr_A	204	Precorrin-6Y methylase; methyltransferase, decarbo	97.63
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	97.63
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	97.58
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	97.54
3e05_A	204	Precorrin-6Y C5,15-methyltransferase (decarboxyla;	97.53
3hm2_A	178	Precorrin-6Y C5,15-methyltransferase; alpha-beta-s	97.52
2nyu_A	196	Putative ribosomal RNA methyltransferase 2; SAM, s	97.51
2pwy_A	258	TRNA (adenine-N(1)-)-methyltransferase; mtase, ado	97.44
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	97.43
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	97.42
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	97.41
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	97.41
2fk8_A	318	Methoxy mycolic acid synthase 4; S-adenosylmethion	97.4
1jg1_A	235	PIMT;, protein-L-isoaspartate O-methyltransferase;	97.38
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	97.37
3mb5_A	255	SAM-dependent methyltransferase; RNA methyltransfe	97.35
3h9u_A	436	Adenosylhomocysteinase; NAD CO-factor complex, str	97.35
2hnk_A	239	SAM-dependent O-methyltransferase; modified rossma	97.34
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	97.33
2gpy_A	233	O-methyltransferase; structural genomics, PSI, pro	97.33
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	97.32
3dr5_A	221	Putative O-methyltransferase; Q8NRD3, CGL1119, PF0	97.31
2yxe_A	215	Protein-L-isoaspartate O-methyltransferase; rossma	97.29
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	97.28
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	97.28
3hem_A	302	Cyclopropane-fatty-acyl-phospholipid synthase 2; p	97.28
3grz_A	205	L11 mtase, ribosomal protein L11 methyltransferase	97.27
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	97.25
3lbf_A	210	Protein-L-isoaspartate O-methyltransferase; modifi	97.25
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	97.24
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	97.23
4df3_A	233	Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase;	97.23
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	97.23
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	97.21
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	97.2
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	97.18
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	97.18
3ujc_A	266	Phosphoethanolamine N-methyltransferase; parasite;	97.17
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	97.17
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	97.16
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	97.16
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	97.15
3tfw_A	248	Putative O-methyltransferase; PSI-biology, nysgrc,	97.15
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	97.14
1kpg_A	287	CFA synthase;, cyclopropane-fatty-acyl-phospholipi	97.14
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	97.14
2pbf_A	227	Protein-L-isoaspartate O-methyltransferase beta-A	97.13
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	97.13
2avd_A	229	Catechol-O-methyltransferase; structural genomics,	97.13
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	97.11
1xhl_A	297	Short-chain dehydrogenase/reductase family member	97.11
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	97.11
4dqx_A	277	Probable oxidoreductase protein; structural genomi	97.11
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	97.1
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	97.09
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	97.08
1c1d_A	355	L-phenylalanine dehydrogenase; amino acid dehydrog	97.08
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	97.08
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	97.08
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	97.08
3cea_A	346	MYO-inositol 2-dehydrogenase; NP_786804.1, oxidore	97.07
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	97.07
3mti_A	185	RRNA methylase; SAM-dependent, PSI, MCSG, structur	97.07
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	97.07
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	97.06
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	97.06
3eey_A	197	Putative rRNA methylase; rRNA methylation, S-adeno	97.05
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	97.03
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	97.03
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.03
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	97.03
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	97.02
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	97.02
1dl5_A	317	Protein-L-isoaspartate O-methyltransferase; isoasp	97.0
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	97.0
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	97.0
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	97.0
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	97.0
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	96.99
3orh_A	236	Guanidinoacetate N-methyltransferase; structura ge	96.99
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	96.99
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	96.99
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	96.99
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	96.98
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	96.98
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	96.98
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	96.97
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	96.97
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	96.96
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	96.96
1wwk_A	307	Phosphoglycerate dehydrogenase; riken structural g	96.96
3cbg_A	232	O-methyltransferase; cyanobacterium; HET: SAH FER	96.96
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	96.95
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	96.95
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	96.95
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	96.95
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	96.94
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	96.94
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	96.94
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	96.93
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	96.93
1spx_A	278	Short-chain reductase family member (5L265); paral	96.93
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	96.93
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	96.91
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	96.91
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	96.89
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	96.89
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	96.88
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	96.87
3ou2_A	218	SAM-dependent methyltransferase; O-methyltransfera	96.87
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	96.87
3imf_A	257	Short chain dehydrogenase; structural genomics, in	96.86
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	96.85
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	96.85
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	96.85
2nxc_A	254	L11 mtase, ribosomal protein L11 methyltransferase	96.84
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	96.84
1sui_A	247	Caffeoyl-COA O-methyltransferase; rossmann fold, p	96.84
3d64_A	494	Adenosylhomocysteinase; structural genomics, ssgci	96.83
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	96.83
1yb2_A	275	Hypothetical protein TA0852; structural genomics,	96.83
1l3i_A	192	Precorrin-6Y methyltransferase/putative decarboxyl	96.82
1nvm_B	312	Acetaldehyde dehydrogenase (acylating), 4-hydroxy-	96.82
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	96.82
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	96.81
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	96.8
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	96.8
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	96.8
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	96.8
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	96.79
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	96.79
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	96.79
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	96.78
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	96.78
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	96.77
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	96.77
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	96.77
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	96.76
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	96.76
2ekl_A	313	D-3-phosphoglycerate dehydrogenase; structural gen	96.76
3dfz_A	223	SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase	96.75
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	96.75
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	96.75
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	96.75
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	96.74
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	96.74
1id1_A	153	Putative potassium channel protein; RCK domain, E.	96.74
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	96.73
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	96.73
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	96.73
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	96.73
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	96.73
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	96.73
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	96.72
1v8b_A	479	Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2	96.72
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	96.72
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	96.72
1fbn_A	230	MJ fibrillarin homologue; MJ proteins, ribosomal R	96.72
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	96.72
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	96.71
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	96.71
1xkq_A	280	Short-chain reductase family member (5D234); parra	96.71
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	96.71
3cxt_A	291	Dehydrogenase with different specificities; rossma	96.7
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	96.69
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	96.69
3duw_A	223	OMT, O-methyltransferase, putative; alternating of	96.69
1vpd_A	299	Tartronate semialdehyde reductase; structural geno	96.68
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	96.68
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	96.68
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	96.68
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	96.66
1mjf_A	281	Spermidine synthase; spermidine synthetase, struct	96.66
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	96.66
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	96.65
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	96.65
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	96.65
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	96.64
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	96.64
3rih_A	293	Short chain dehydrogenase or reductase; structural	96.63
1r18_A	227	Protein-L-isoaspartate(D-aspartate)-O-methyltrans;	96.63
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	96.63
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	96.62
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	96.62
1xj5_A	334	Spermidine synthase 1; structural genomics, protei	96.62
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	96.62
3e18_A	359	Oxidoreductase; dehydrogenase, NAD-binding, struct	96.61
3c3y_A	237	Pfomt, O-methyltransferase; plant secondary metabo	96.6
1vbf_A	231	231AA long hypothetical protein-L-isoaspartate O-	96.6
3tr6_A	225	O-methyltransferase; cellular processes; HET: SAH;	96.6
1i1n_A	226	Protein-L-isoaspartate O-methyltransferase; S-aden	96.59
3vc1_A	312	Geranyl diphosphate 2-C-methyltransferase; rossman	96.59
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	96.59
3dli_A	240	Methyltransferase; PSI-II, NYSGXRC, structural gen	96.59
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	96.59
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	96.59
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	96.58
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	96.58
1xq1_A	266	Putative tropinone reducatse; structural genomics,	96.58
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	96.57
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	96.57
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	96.57
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	96.57
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	96.56
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	96.56
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	96.56
1nkv_A	256	Hypothetical protein YJHP; structural genomics, PS	96.56
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	96.54
3jtm_A	351	Formate dehydrogenase, mitochondrial; mitochondrio	96.54
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	96.54
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	96.53
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	96.53
3evz_A	230	Methyltransferase; NYSGXRC, NEW YORK SGX research	96.53
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	96.52
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	96.52
4gek_A	261	TRNA (CMO5U34)-methyltransferase; structural genom	96.52
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	96.52
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	96.52
1npy_A	271	Hypothetical shikimate 5-dehydrogenase-like protei	96.51
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	96.51
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	96.51
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	96.51
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	96.51
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	96.51
2g76_A	335	3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidor	96.5
1vl6_A	388	Malate oxidoreductase; TM0542, NAD-dependent malic	96.49
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	96.49
2dbq_A	334	Glyoxylate reductase; D-3-phosphoglycerate dehydro	96.48
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	96.48
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	96.48
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	96.48
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	96.47
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	96.47
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	96.47
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	96.45
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	96.45
2b2c_A	314	Spermidine synthase; beta-alpha, transferase; 2.50	96.44
1ej0_A	180	FTSJ; methyltransferase, adoMet, adenosyl methioni	96.44
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	96.44
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	96.43
2j6i_A	364	Formate dehydrogenase; oxidoreductase, D-specific-	96.42
3uwp_A	438	Histone-lysine N-methyltransferase, H3 lysine-79;	96.42
3gg9_A	352	D-3-phosphoglycerate dehydrogenase oxidoreductase;	96.42
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	96.42
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	96.42
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	96.42
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	96.41
4had_A	350	Probable oxidoreductase protein; structural genomi	96.41
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	96.4
2w2k_A	348	D-mandelate dehydrogenase; 2-hydroxyacid dehydroge	96.39
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	96.39
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	96.38
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	96.38
3g89_A	249	Ribosomal RNA small subunit methyltransferase G; 1	96.37
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	96.37
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	96.37
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	96.36
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	96.36
3adn_A	294	Spermidine synthase; aminopropyltransferase, polya	96.36
3bwc_A	304	Spermidine synthase; SAM, SGPP, structura genomics	96.35
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	96.35
2gcg_A	330	Glyoxylate reductase/hydroxypyruvate reductase; NA	96.35
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	96.35
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	96.35
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	96.34
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	96.33
2glx_A	332	1,5-anhydro-D-fructose reductase; NADP(H) dependen	96.33
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	96.33
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	96.32
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	96.32
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	96.31
1iy9_A	275	Spermidine synthase; rossmann fold, structural gen	96.31
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	96.3
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	96.29
2nac_A	393	NAD-dependent formate dehydrogenase; oxidoreductas	96.29
3q2i_A	354	Dehydrogenase; rossmann fold, UDP-sugar binding, N	96.28
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	96.27
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	96.27
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	96.27
1vl5_A	260	Unknown conserved protein BH2331; putative methylt	96.26
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	96.26
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	96.26
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	96.26
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	96.25
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	96.25
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	96.24
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	96.24
1xq6_A	253	Unknown protein; structural genomics, protein stru	96.24
3gjy_A	317	Spermidine synthase; APC62791, structural genomics	96.23
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	96.23
1gdh_A	320	D-glycerate dehydrogenase; oxidoreductase(CHOH (D)	96.21
4e5n_A	330	Thermostable phosphite dehydrogenase; D-2-hydroxya	96.2
3m33_A	226	Uncharacterized protein; structural genomics, PSI-	96.2
3pdu_A	287	3-hydroxyisobutyrate dehydrogenase family protein;	96.18
3euw_A	344	MYO-inositol dehydrogenase; protein structure init	96.18
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	96.18
3ajd_A	274	Putative methyltransferase MJ0026; tRNA, M5C, ross	96.17
2i7c_A	283	Spermidine synthase; transferase, structural genom	96.17
3u3x_A	361	Oxidoreductase; structural genomics, PSI-biology,	96.17
2o07_A	304	Spermidine synthase; structural genomics, structur	96.16
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	96.15
4hkt_A	331	Inositol 2-dehydrogenase; structural genomics, nys	96.15
3l6d_A	306	Putative oxidoreductase; structural genomics, prot	96.14
1ixk_A	315	Methyltransferase; open beta sheet; 1.90A {Pyrococ	96.12
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	96.12
2uyy_A	316	N-PAC protein; long-chain dehydrogenase, cytokine;	96.11
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	96.11
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	96.11
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	96.11
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	96.09
3ezy_A	344	Dehydrogenase; structural genomics, unknown functi	96.08
3iv6_A	261	Putative Zn-dependent alcohol dehydrogenase; alpha	96.07
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	96.06
3bus_A	273	REBM, methyltransferase; rebeccamycin synthesis; H	96.06
3g07_A	292	7SK snRNA methylphosphate capping enzyme; structur	96.05
2o57_A	297	Putative sarcosine dimethylglycine methyltransfera	96.05
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	96.05
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	96.05
2pxx_A	215	Uncharacterized protein MGC2408; structural genomi	96.05
4fb5_A	393	Probable oxidoreductase protein; PSI-biology, nysg	96.04
3dxy_A	218	TRNA (guanine-N(7)-)-methyltransferase; rossmann f	96.02
1pjz_A	203	Thiopurine S-methyltransferase; polymorphism, S-ad	96.02
2f1k_A	279	Prephenate dehydrogenase; tyrosine synthesis, X-RA	96.01
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	96.01
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	96.0
3cky_A	301	2-hydroxymethyl glutarate dehydrogenase; rossmann	96.0
2ph5_A	480	Homospermidine synthase; alpha-beta protein, struc	96.0
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	96.0
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	96.0
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	96.0
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	96.0
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	95.99
1mx3_A	347	CTBP1, C-terminal binding protein 1; nuclear prote	95.98
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	95.97
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	95.97
1g8a_A	227	Fibrillarin-like PRE-rRNA processing protein; rRNA	95.97
2gb4_A	252	Thiopurine S-methyltransferase; 18204406, thiopuri	95.97
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	95.97
3l07_A	285	Bifunctional protein fold; structural genomics, ID	95.96
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	95.96
1nt2_A	210	Fibrillarin-like PRE-rRNA processing protein; adeM	95.96
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	95.95
3db2_A	354	Putative NADPH-dependent oxidoreductase; two domai	95.95
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	95.94
3rc1_A	350	Sugar 3-ketoreductase; sugar biosynthesis, TDP bin	95.93
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	95.93
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	95.93
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	95.92
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	95.92
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	95.92
1inl_A	296	Spermidine synthase; beta-barrel, rossman fold, st	95.92
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	95.91
3f4k_A	257	Putative methyltransferase; structural genomics, P	95.91
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	95.9
2g5c_A	281	Prephenate dehydrogenase; TYRA, oxidoreductase; HE	95.9
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	95.9
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	95.89
1a4i_A	301	Methylenetetrahydrofolate dehydrogenase / methenyl	95.89
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	95.89
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	95.89
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	95.88
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	95.88
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	95.87
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	95.87
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	95.86
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	95.86
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	95.86
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	95.86
1zx0_A	236	Guanidinoacetate N-methyltransferase; structural g	95.85
1sqg_A	429	SUN protein, FMU protein; rossmann-fold, mixed bet	95.85
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	95.84
1u2z_A	433	Histone-lysine N-methyltransferase, H3 lysine-79 s	95.84
3p9n_A	189	Possible methyltransferase (methylase); RV2966C, a	95.83
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	95.83
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	95.83
3id6_C	232	Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase;	95.83
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	95.83
2cvz_A	289	Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase;	95.82
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	95.82
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	95.82
4gqa_A	412	NAD binding oxidoreductase; structural genomics, P	95.81
3bkw_A	243	MLL3908 protein, S-adenosylmethionine dependent me	95.8
4dmg_A	393	Putative uncharacterized protein TTHA1493; rRNA, m	95.79
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	95.79
1b0a_A	288	Protein (fold bifunctional protein); folate, dehyd	95.79
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	95.77
3ktd_A	341	Prephenate dehydrogenase; structural genomics, joi	95.77
3g5l_A	253	Putative S-adenosylmethionine dependent methyltran	95.77
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	95.76
3u81_A	221	Catechol O-methyltransferase; neurotransmitter deg	95.76
2fca_A	213	TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bac	95.75
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	95.75
2gf2_A	296	Hibadh, 3-hydroxyisobutyrate dehydrogenase; struct	95.74
2yxl_A	450	PH0851 protein, 450AA long hypothetical FMU protei	95.73
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	95.73
1j4a_A	333	D-LDH, D-lactate dehydrogenase; NAD-dependent dehy	95.73
2pt6_A	321	Spermidine synthase; transferase, structural genom	95.73
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	95.73
3i9f_A	170	Putative type 11 methyltransferase; structural gen	95.72
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	95.72
3m6w_A	464	RRNA methylase; rRNA methyltransferase, 5-methylcy	95.72
4hy3_A	365	Phosphoglycerate oxidoreductase; PSI-biology, stru	95.72

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=100.00  E-value=2.4e-65  Score=470.02  Aligned_cols=349  Identities=57%  Similarity=1.015  Sum_probs=312.1

Q ss_pred             ccchhcceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCC
Q 018529            6 GLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSD   85 (354)
Q Consensus         6 ~~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~   85 (354)
                      ++|+||||+++++++++++++++|.|+|++|||||||.++|||++|++++.|..+...+|.++|||++|+|+++|+++++
T Consensus         4 ~~~~tmkA~v~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G~V~~vG~~v~~   83 (378)
T 3uko_A            4 GQVITCKAAVAYEPNKPLVIEDVQVAPPQAGEVRIKILYTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTE   83 (378)
T ss_dssp             TSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHTTCCTTCCSSBCCCCEEEEEEEEECTTCCS
T ss_pred             ccceeeEEEEEecCCCccEEEEecCCCCCCCeEEEEEEEeecCHHHHHHhcCCCCCCCCCccCCccceEEEEEeCCCCCc
Confidence            58999999999999988999999999999999999999999999999999987766778999999999999999999999


Q ss_pred             CCCCCEEEecccCCCCCCcccccCCCCCCcc--------------------------cccccccceeeEEeeccceEECC
Q 018529           86 LEVGDHVLPVFTGECGDCRHCRFSINGEPVN--------------------------HFLGTSTFSEYTVVHSGCVAKIN  139 (354)
Q Consensus        86 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~--------------------------~~~~~g~~a~~~~v~~~~~~~~P  139 (354)
                      |++||||++.+..+|++|++|+.+....+..                          ...+.|+|+||+.+|++.++++|
T Consensus        84 ~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP  163 (378)
T 3uko_A           84 VQAGDHVIPCYQAECRECKFCKSGKTNLCGKVRSATGVGIMMNDRKSRFSVNGKPIYHFMGTSTFSQYTVVHDVSVAKID  163 (378)
T ss_dssp             CCTTCEEEECSSCCCSSSHHHHHTSCSCCCSSHHHHTTTCCTTTSSCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEECC
T ss_pred             CCCCCEEEEecCCCCCCChhhhCcCcCcCcCcccccccccccccCccccccCCcccccccCCcceEeEEEechhheEECC
Confidence            9999999999999999999998665432211                          12234799999999999999999


Q ss_pred             CCCCccchhhcccchhhhhhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEE
Q 018529          140 PLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFV  219 (354)
Q Consensus       140 ~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~  219 (354)
                      +++++++||++++++.|||+++.+.+++++|++|||+|+|++|++++|+|+.+|+.+|++++++++|+++++++|+++++
T Consensus       164 ~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi  243 (378)
T 3uko_A          164 PTAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEFV  243 (378)
T ss_dssp             TTSCHHHHGGGGTHHHHHHHHHHTTTCCCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTCCEEE
T ss_pred             CCCCHHHhhhhhhhHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCcEEE
Confidence            99999999999999999999988889999999999999999999999999999998899999999999999999999999


Q ss_pred             cCCCCChhHHHHHHHHcCCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhhccccEEEEEeccC
Q 018529          220 NTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGN  299 (354)
Q Consensus       220 ~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~  299 (354)
                      ++.+.+.++.+.+++++++++|+|||++|++..++.+++++++++|+++.+|.........+....+.+++++.|++++.
T Consensus       244 ~~~~~~~~~~~~i~~~~~gg~D~vid~~g~~~~~~~~~~~l~~g~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~  323 (378)
T 3uko_A          244 NPKDHDKPIQEVIVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGG  323 (378)
T ss_dssp             CGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGGG
T ss_pred             ccccCchhHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHHhhccCCEEEEEcccCCCCccccCHHHHhcCcEEEEEEecC
Confidence            98743345899999999889999999999988999999999992299999998664555566555555789999988765


Q ss_pred             CCCCCCHHHHHHHHHccCCCCCCceeeeeccccHHHHHHHHhcCCceeEEEecCC
Q 018529          300 YKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISMED  354 (354)
Q Consensus       300 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~~k~vi~~~d  354 (354)
                      +..++++.++++++.++++++.++++++|+|+++++||+.+.+++..|+||++++
T Consensus       324 ~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~g~~~Kvvi~~~~  378 (378)
T 3uko_A          324 FKSRTQVPWLVEKYMNKEIKVDEYITHNLTLGEINKAFDLLHEGTCLRCVLDTSK  378 (378)
T ss_dssp             CCHHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHTTCTTCSEEEEETTC
T ss_pred             CCchHHHHHHHHHHHcCCCChhHheeeEeeHHHHHHHHHHHHCCCceEEEEecCC
Confidence            5555679999999999999998899999999999999999998888899999864

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=100.00  E-value=1e-62  Score=451.95  Aligned_cols=346  Identities=45%  Similarity=0.792  Sum_probs=299.7

Q ss_pred             CCCccccchhcceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeC
Q 018529            1 MSSTAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVG   80 (354)
Q Consensus         1 m~~~~~~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG   80 (354)
                      |++ ..+||+|||+++.+++++++++++|.|+|+++||||||.++|||++|++++.|..+ ..+|.++|||++|+|+++|
T Consensus         1 ~~~-~~~p~~mka~~~~~~g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-~~~P~v~GhE~~G~V~~vG   78 (373)
T 1p0f_A            1 MCT-AGKDITCKAAVAWEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIP-SKFPVILGHEAVGVVESIG   78 (373)
T ss_dssp             -CC-TTSCEEEEEEEBSSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSC-CCSSBCCCCCEEEEEEEEC
T ss_pred             Ccc-cCCcceeEEEEEEcCCCCeeEEEeeCCCCCCCeEEEEEeEEeecchhHHHhcCCCC-CCCCcccCcCceEEEEEEC
Confidence            664 45899999999999987799999999999999999999999999999999988654 5679999999999999999


Q ss_pred             CCCCCCCCCCEEEecccCCCCCCcccccCCCCCC-cc------cc------------------cccccceeeEEeeccce
Q 018529           81 EGVSDLEVGDHVLPVFTGECGDCRHCRFSINGEP-VN------HF------------------LGTSTFSEYTVVHSGCV  135 (354)
Q Consensus        81 ~~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~-~~------~~------------------~~~g~~a~~~~v~~~~~  135 (354)
                      +++++|++||||++.+..+|++|.+|+.+....+ ..      +.                  ...|+|+||+.+|++.+
T Consensus        79 ~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~  158 (373)
T 1p0f_A           79 AGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAV  158 (373)
T ss_dssp             TTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCSTTTCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEETTSE
T ss_pred             CCCCccCCCCEEEECCCCCCCCChhhcCCCcCcCcCCCcccccccccCCccccccCCcccccccCCccceeEEEEchhhE
Confidence            9999999999999999999999999987654322 11      11                  12489999999999999


Q ss_pred             EECCCCCCccchhhcccchhhhhhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCC
Q 018529          136 AKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV  215 (354)
Q Consensus       136 ~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~  215 (354)
                      +++|++++++ ||++++++.|||+++.+.+++++|++|||+|+|++|++++|+|+.+|+.+|++++++++|+++++++|+
T Consensus       159 ~~iP~~l~~~-aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa  237 (373)
T 1p0f_A          159 AKIDPKAPLE-SCLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGA  237 (373)
T ss_dssp             EEECTTCCGG-GGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTC
T ss_pred             EECCCCCChh-hhhhhhHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCC
Confidence            9999999999 999999999999998888999999999999999999999999999999789999999999999999999


Q ss_pred             ceEEcCCCCChhHHHHHHHHcCCCccEEEEcccChHhHHHHHHHhhCCC-ceEEEEcCCCCCceeecchhhh-ccccEEE
Q 018529          216 TDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGW-GVAVLVGVPSKDAVFMTKPINV-LNERTLK  293 (354)
Q Consensus       216 ~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~-g~~v~~g~~~~~~~~~~~~~~~-~~~~~i~  293 (354)
                      ++++++.+.+.++.+.+++++++++|+|||++|+++.++.+++++++ + |+++.+|.........+....+ .++ ++.
T Consensus       238 ~~vi~~~~~~~~~~~~i~~~t~gg~Dvvid~~g~~~~~~~~~~~l~~-~~G~iv~~G~~~~~~~~~~~~~~~~~~~-~i~  315 (373)
T 1p0f_A          238 TECLNPKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYC-GSGVTVVLGLASPNERLPLDPLLLLTGR-SLK  315 (373)
T ss_dssp             SEEECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCT-TTCEEEECCCCCTTCCEEECTHHHHTTC-EEE
T ss_pred             cEEEecccccchHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHHhc-CCCEEEEEccCCCCCccccCHHHhccCc-eEE
Confidence            99998875223488889998877999999999998889999999999 6 9999999765333334444434 356 999


Q ss_pred             EEeccCCCCCCCHHHHHHHHHccCCCCCCceeeeeccccHHHHHHHHhcCCceeEEEec
Q 018529          294 GTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISM  352 (354)
Q Consensus       294 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~~k~vi~~  352 (354)
                      |++.+.+.. ++++++++++.+|++++.++++++|+|+++++||+.+.+++.+|+||++
T Consensus       316 g~~~~~~~~-~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvi~~  373 (373)
T 1p0f_A          316 GSVFGGFKG-EEVSRLVDDYMKKKINVNFLVSTKLTLDQINKAFELLSSGQGVRSIMIY  373 (373)
T ss_dssp             ECSGGGCCG-GGHHHHHHHHHTTSSCGGGGEEEEECGGGHHHHHHHTTTSSCSEEEEEC
T ss_pred             eeccCCcCH-HHHHHHHHHHHcCCCCchheEEEEeeHHHHHHHHHHHHCCCcceEEEeC
Confidence            987543322 5799999999999998888899999999999999999888778999875

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=100.00  E-value=1.7e-62  Score=450.59  Aligned_cols=345  Identities=51%  Similarity=0.882  Sum_probs=300.4

Q ss_pred             ccchhcceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCC
Q 018529            6 GLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSD   85 (354)
Q Consensus         6 ~~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~   85 (354)
                      +.||+|||+++.+++++++++++|.|+|+++||+|||.++|||++|++++.|..+...+|.++|||++|+|+++|+++++
T Consensus         2 ~~p~~mkA~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G~V~~vG~~V~~   81 (373)
T 2fzw_A            2 NEVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHLGAGIVESVGEGVTK   81 (373)
T ss_dssp             CCCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTCCTTCCSSBCCCCEEEEEEEEECTTCCS
T ss_pred             CCccceEEEEEecCCCCcEEEEeeCCCCCCCEEEEEEEEEEEchhhHHHhcCCCCCCCCCccccccccEEEEEECCCCCC
Confidence            57899999999999877999999999999999999999999999999999886655567999999999999999999999


Q ss_pred             CCCCCEEEecccCCCCCCcccccCCCCCC-cc------cc------------------cccccceeeEEeeccceEECCC
Q 018529           86 LEVGDHVLPVFTGECGDCRHCRFSINGEP-VN------HF------------------LGTSTFSEYTVVHSGCVAKINP  140 (354)
Q Consensus        86 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~-~~------~~------------------~~~g~~a~~~~v~~~~~~~~P~  140 (354)
                      |++||||++.+..+|++|.+|+.+....+ ..      +.                  ...|+|+||+++|++.++++|+
T Consensus        82 ~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~  161 (373)
T 2fzw_A           82 LKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDP  161 (373)
T ss_dssp             CCTTCEEEECSSCCCSCSHHHHCTTCCCCCTTHHHHHTTCCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEECCT
T ss_pred             CCCCCEEEECCCCCCCCChHHcCcCcccCCCcccccccccccCCcccccccccccccccCCccceeEEEEchhheEECCC
Confidence            99999999999999999999987654322 21      11                  1348999999999999999999


Q ss_pred             CCCccchhhcccchhhhhhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEc
Q 018529          141 LAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN  220 (354)
Q Consensus       141 ~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~  220 (354)
                      ++++++||++++++.|||+++.+.+++++|++|||+|+|++|++++|+|+.+|+.+|++++++++++++++++|++++++
T Consensus       162 ~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~  241 (373)
T 2fzw_A          162 LAPLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECIN  241 (373)
T ss_dssp             TSCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEEC
T ss_pred             CCCHHHHhhhccHHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEec
Confidence            99999999999999999999878899999999999999999999999999999978999999999999999999999998


Q ss_pred             CCCCChhHHHHHHHHcCCCccEEEEcccChHhHHHHHHHhhCCC-ceEEEEcCCCCCceeecchhhh-ccccEEEEEecc
Q 018529          221 TSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGW-GVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFFG  298 (354)
Q Consensus       221 ~~~~~~~~~~~i~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~-g~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~  298 (354)
                      +.+.+.++.+.+++++++++|+|||++|.+..++.+++++++ + |+++.+|.........+....+ .++ ++.|++++
T Consensus       242 ~~~~~~~~~~~v~~~~~~g~D~vid~~g~~~~~~~~~~~l~~-~~G~iv~~G~~~~~~~~~~~~~~~~~~~-~i~g~~~~  319 (373)
T 2fzw_A          242 PQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHK-GWGVSVVVGVAASGEEIATRPFQLVTGR-TWKGTAFG  319 (373)
T ss_dssp             GGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCT-TTCEEEECSCCCTTCCEEECTHHHHTTC-EEEECSGG
T ss_pred             cccccccHHHHHHHHhCCCCCEEEECCCcHHHHHHHHHhhcc-CCcEEEEEecCCCCceeeeCHHHHhcCC-EEEEeccC
Confidence            875223488889988877999999999998889999999999 6 9999999765332334444333 366 99998765


Q ss_pred             CCCCCCCHHHHHHHHHccCCCCCCceeeeeccccHHHHHHHHhcCCceeEEEec
Q 018529          299 NYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISM  352 (354)
Q Consensus       299 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~~k~vi~~  352 (354)
                      .+..+++++++++++.+|++++.++++++|||+++++||+.+.+++..|+||++
T Consensus       320 ~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvi~~  373 (373)
T 2fzw_A          320 GWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINKAFELMHSGKSIRTVVKI  373 (373)
T ss_dssp             GCCHHHHHHHHHHHHHTTSSCSGGGEEEEEEGGGHHHHHHHHHHTCCSEEEEEC
T ss_pred             CCCcHHHHHHHHHHHHcCCCCchheEeEEeeHHHHHHHHHHHhCCCcceEEEeC
Confidence            433345789999999999998888899999999999999999888878999875

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.1e-62  Score=451.58  Aligned_cols=341  Identities=31%  Similarity=0.516  Sum_probs=297.4

Q ss_pred             cchhcceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCC
Q 018529            7 LILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDL   86 (354)
Q Consensus         7 ~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~   86 (354)
                      .+|+|||+++.+++.+++++++|.|+|+++||+|||.++|||++|++++.|..+ ..+|.++|||++|+|+++|+++++|
T Consensus         3 ~~~~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-~~~P~v~GhE~~G~V~~vG~~v~~~   81 (371)
T 1f8f_A            3 ELKDIIAAVTPCKGADFELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYP-VPLPAVLGHEGSGIIEAIGPNVTEL   81 (371)
T ss_dssp             -CEEEEEEEBCSTTCCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSC-CCSSBCCCCEEEEEEEEECTTCCSC
T ss_pred             ccccceEEEEcCCCCCeEEEEecCCCCCCCEEEEEEEEeecCchhHHHHcCCCC-CCCCcccCcccceEEEEeCCCCCCC
Confidence            478999999999987799999999999999999999999999999999988554 4579999999999999999999999


Q ss_pred             CCCCEEEecccCCCCCCcccccCCCCCC-ccc--------------------------ccccccceeeEEeeccceEECC
Q 018529           87 EVGDHVLPVFTGECGDCRHCRFSINGEP-VNH--------------------------FLGTSTFSEYTVVHSGCVAKIN  139 (354)
Q Consensus        87 ~~Gd~V~~~~~~~~~~c~~c~~~~~~~~-~~~--------------------------~~~~g~~a~~~~v~~~~~~~~P  139 (354)
                      ++||||++.+ .+|+.|++|+.+....+ ...                          ....|+|+||+.+|++.++++|
T Consensus        82 ~~GdrV~~~~-~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~~g~~~~~~~~~~G~~aey~~v~~~~~~~iP  160 (371)
T 1f8f_A           82 QVGDHVVLSY-GYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVT  160 (371)
T ss_dssp             CTTCEEEECC-CCCSSSHHHHTTCGGGCTTHHHHSSSSSCSSSCCSBC------CBCCGGGTCCSBSEEEEEGGGEEEEC
T ss_pred             CCCCEEEecC-CCCCCChhhhCcCccccccccccccccccccccccccccCCccccccccCCccccCeEEechhheEECC
Confidence            9999999999 99999999986653322 110                          1235899999999999999999


Q ss_pred             CCCCccchhhcccchhhhhhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEE
Q 018529          140 PLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFV  219 (354)
Q Consensus       140 ~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~  219 (354)
                      +++++++||++++++.|||+++.+.+++++|++|||+|+|++|++++|+|+.+|+++|++++++++++++++++|+++++
T Consensus       161 ~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi  240 (371)
T 1f8f_A          161 KDVPIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVI  240 (371)
T ss_dssp             TTSCGGGTGGGGTHHHHHHHHHHTTTCCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEE
T ss_pred             CCCCHHHHHHhcchHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCCEEe
Confidence            99999999999999999999987889999999999999999999999999999997799999999999999999999999


Q ss_pred             cCCCCChhHHHHHHHHcCCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhh-hccccEEEEEecc
Q 018529          220 NTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFG  298 (354)
Q Consensus       220 ~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~  298 (354)
                      ++.+.+  +.+.+++++++++|+|||++|.+..++.++++++++ |+++.+|.........+.... +.+++++.|++.+
T Consensus       241 ~~~~~~--~~~~~~~~~~gg~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~  317 (371)
T 1f8f_A          241 NSKTQD--PVAAIKEITDGGVNFALESTGSPEILKQGVDALGIL-GKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVEG  317 (371)
T ss_dssp             ETTTSC--HHHHHHHHTTSCEEEEEECSCCHHHHHHHHHTEEEE-EEEEECCCCSTTCCCCCCHHHHHHTTCEEEECSGG
T ss_pred             cCCccC--HHHHHHHhcCCCCcEEEECCCCHHHHHHHHHHHhcC-CEEEEeCCCCCCCccccCHHHHHhCCCEEEEeCCC
Confidence            987765  888898888779999999999988899999999997 999999976532223344333 3489999998765


Q ss_pred             CCCCCCCHHHHHHHHHccCCCCCCceeeeeccccHHHHHHHHhcCCceeEEEecC
Q 018529          299 NYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISME  353 (354)
Q Consensus       299 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~~k~vi~~~  353 (354)
                      .+..+++++++++++.+|++++.+++++ |||+|+++||+.+.+++.+|+||++.
T Consensus       318 ~~~~~~~~~~~~~l~~~g~l~~~~~i~~-~~l~~~~~A~~~~~~~~~~Kvvv~~~  371 (371)
T 1f8f_A          318 SGSPKKFIPELVRLYQQGKFPFDQLVKF-YAFDEINQAAIDSRKGITLKPIIKIA  371 (371)
T ss_dssp             GSCHHHHHHHHHHHHHTTSCCGGGGEEE-EEGGGHHHHHHHHHHTSCSEEEEECC
T ss_pred             CCchHHHHHHHHHHHHcCCCCcccceeE-ecHHHHHHHHHHHHCCCceEEEEeeC
Confidence            4333356899999999999988888888 99999999999998888789999863

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=100.00  E-value=3.1e-62  Score=449.22  Aligned_cols=342  Identities=42%  Similarity=0.815  Sum_probs=298.1

Q ss_pred             ccchhcceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCC
Q 018529            6 GLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSD   85 (354)
Q Consensus         6 ~~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~   85 (354)
                      +.||+|||+++.+++.+++++++|.|+|+++||+|||.++|||++|++++.|. +...+|.++|||++|+|+++|+++++
T Consensus         4 ~~p~~mka~~~~~~g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~-~~~~~P~v~GhE~~G~V~~vG~~v~~   82 (376)
T 1e3i_A            4 GKVIKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPK-KKALFPVVLGHECAGIVESVGPGVTN   82 (376)
T ss_dssp             TSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHTTCTT-SCCCSSBCCCCEEEEEEEEECTTCCS
T ss_pred             CCChheeEEEEecCCCCeEEEEeeCCCCCCCeEEEEEeEEeEchhhHHHhcCC-CCCCCCcccCccccEEEEEECCCCcc
Confidence            57999999999999877999999999999999999999999999999998875 44567999999999999999999999


Q ss_pred             CCCCCEEEecccCCCCCCcccccCCCCCCcc-----------cc------------------cccccceeeEEeeccceE
Q 018529           86 LEVGDHVLPVFTGECGDCRHCRFSINGEPVN-----------HF------------------LGTSTFSEYTVVHSGCVA  136 (354)
Q Consensus        86 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~-----------~~------------------~~~g~~a~~~~v~~~~~~  136 (354)
                      |++||||++.+..+|++|.+|+.+....+..           +.                  ...|+|+||+.+|++.++
T Consensus        83 ~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~  162 (376)
T 1e3i_A           83 FKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLA  162 (376)
T ss_dssp             CCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGEE
T ss_pred             CCCCCEEEECCcCCCCCCccccCCCcccCcCcCccccccccccccccCccccccCCcccccccCCccceeEEEeccccEE
Confidence            9999999999999999999998765432211           11                  124899999999999999


Q ss_pred             ECCCCCCccchhhcccchhhhhhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCc
Q 018529          137 KINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT  216 (354)
Q Consensus       137 ~~P~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~  216 (354)
                      ++|+++++++||++++++.|||+++.+.+++++|++|||+|+|++|++++|+|+.+|+.+|++++++++++++++++|++
T Consensus       163 ~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~  242 (376)
T 1e3i_A          163 RVDDEANLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGAT  242 (376)
T ss_dssp             ECCTTCCHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCS
T ss_pred             ECCCCCCHHHhhhhccHHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCc
Confidence            99999999999999999999999988889999999999999999999999999999997899999999999999999999


Q ss_pred             eEEcCCCCChhHHHHHHHHcCCCccEEEEcccChHhHHHHHHHhhCCC-ceEEEEcCCCCCceeecchhhhc-cccEEEE
Q 018529          217 DFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGW-GVAVLVGVPSKDAVFMTKPINVL-NERTLKG  294 (354)
Q Consensus       217 ~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~-g~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g  294 (354)
                      +++++.+.+.++.+.+++++++++|+|||++|++..++.+++++++ + |+++.+|...  ....+....+. ++ ++.|
T Consensus       243 ~vi~~~~~~~~~~~~v~~~~~~g~Dvvid~~G~~~~~~~~~~~l~~-~~G~iv~~G~~~--~~~~~~~~~~~~~~-~i~g  318 (376)
T 1e3i_A          243 DCLNPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVL-GWGSCTVVGAKV--DEMTIPTVDVILGR-SING  318 (376)
T ss_dssp             EEECGGGCSSCHHHHHHHHHTSCBSEEEESSCCHHHHHHHHHTBCT-TTCEEEECCCSS--SEEEEEHHHHHTTC-EEEE
T ss_pred             EEEccccccchHHHHHHHHhCCCccEEEECCCCHHHHHHHHHHhhc-CCCEEEEECCCC--CccccCHHHhhccC-eEEE
Confidence            9998875223488889888877999999999998889999999999 6 9999999842  23344444333 66 9999


Q ss_pred             EeccCCCCCCCHHHHHHHHHccCCCCCCceeeeeccccHHHHHHHHhcCCceeEEEec
Q 018529          295 TFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISM  352 (354)
Q Consensus       295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~~k~vi~~  352 (354)
                      ++.+.+..+++++++++++.++++++.++++++|+|+++++||+.+.+++.+|+||++
T Consensus       319 ~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~Kvvi~~  376 (376)
T 1e3i_A          319 TFFGGWKSVDSVPNLVSDYKNKKFDLDLLVTHALPFESINDAIDLMKEGKSIRTILTF  376 (376)
T ss_dssp             CSGGGCCHHHHHHHHHHHHHTTSSCGGGGEEEEEEGGGHHHHHHHHHTTCCSEEEEEC
T ss_pred             EecCCCCcHHHHHHHHHHHHcCCCCcHHhEeeeecHHHHHHHHHHHhcCCcceEEEeC
Confidence            8765433345789999999999998888899999999999999999988878999875

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=100.00  E-value=4.5e-62  Score=447.85  Aligned_cols=345  Identities=48%  Similarity=0.846  Sum_probs=299.2

Q ss_pred             cccchhcceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCC
Q 018529            5 AGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVS   84 (354)
Q Consensus         5 ~~~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   84 (354)
                      ...||+|||+++.+++++++++++|.|+|++|||+|||.++|||++|++++.|..+.. +|.++|||++|+|+++|++++
T Consensus         3 ~~~~~~mkA~~~~~~g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~-~P~v~GhE~~G~V~~vG~~v~   81 (374)
T 2jhf_A            3 AGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTP-LPVIAGHEAAGIVESIGEGVT   81 (374)
T ss_dssp             TTSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTSSCCC-SSBCCCCSEEEEEEEECTTCC
T ss_pred             CCCceeEEEEEEecCCCceEEEEccCCCCCCCeEEEEEeEEeechhhHHHHcCCCCCC-CCcccCcCceEEEEEECCCCC
Confidence            3468999999999998779999999999999999999999999999999998865433 799999999999999999999


Q ss_pred             CCCCCCEEEecccCCCCCCcccccCCCCCC-cc------cc------------------cccccceeeEEeeccceEECC
Q 018529           85 DLEVGDHVLPVFTGECGDCRHCRFSINGEP-VN------HF------------------LGTSTFSEYTVVHSGCVAKIN  139 (354)
Q Consensus        85 ~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~-~~------~~------------------~~~g~~a~~~~v~~~~~~~~P  139 (354)
                      +|++||||++.+..+|+.|.+|+.+....+ ..      +.                  ...|+|+||+.+|++.++++|
T Consensus        82 ~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP  161 (374)
T 2jhf_A           82 TVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKID  161 (374)
T ss_dssp             SCCTTCEEEECSSCCCSCSHHHHSTTCCCCTTCSSSSCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEEGGGEEECC
T ss_pred             CCCCCCEEEECCCCCCCCCccccCCCcCcCCCCccccccccccCCcccccccccccccccCCccCeeEEEEchHHeEECC
Confidence            999999999999999999999987654322 11      11                  124899999999999999999


Q ss_pred             CCCCccchhhcccchhhhhhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEE
Q 018529          140 PLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFV  219 (354)
Q Consensus       140 ~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~  219 (354)
                      +++++++||++++++.|||+++.+.+++++|++|||+|+|++|++++|+|+.+|+.+|++++++++++++++++|+++++
T Consensus       162 ~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi  241 (374)
T 2jhf_A          162 AASPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECV  241 (374)
T ss_dssp             TTCCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEE
T ss_pred             CCCCHHHhhhhccHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCceEe
Confidence            99999999999999999999987889999999999999999999999999999997899999999999999999999999


Q ss_pred             cCCCCChhHHHHHHHHcCCCccEEEEcccChHhHHHHHHHhhCCC-ceEEEEcCCCCCceeecchhhh-ccccEEEEEec
Q 018529          220 NTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGW-GVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFF  297 (354)
Q Consensus       220 ~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~-g~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~  297 (354)
                      ++.+.+.++.+.+++++++++|+|||++|.+..++.+++++++ + |+++.+|.........+....+ .++ ++.|+++
T Consensus       242 ~~~~~~~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~-~~G~iv~~G~~~~~~~~~~~~~~~~~~~-~i~g~~~  319 (374)
T 2jhf_A          242 NPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQE-AYGVSVIVGVPPDSQNLSMNPMLLLSGR-TWKGAIF  319 (374)
T ss_dssp             CGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHHBCT-TTCEEEECSCCCTTCCEEECTHHHHTTC-EEEECSG
T ss_pred             cccccchhHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhc-CCcEEEEeccCCCCCccccCHHHHhcCC-eEEEecc
Confidence            8875223488888888877999999999998889999999999 6 9999999765333334444333 366 9999876


Q ss_pred             cCCCCCCCHHHHHHHHHccCCCCCCceeeeeccccHHHHHHHHhcCCceeEEEec
Q 018529          298 GNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISM  352 (354)
Q Consensus       298 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~~k~vi~~  352 (354)
                      +.+...++++++++++.+|++++.++++++|+|+++++||+.+.+++..|+||++
T Consensus       320 ~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~Kvvi~~  374 (374)
T 2jhf_A          320 GGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGESIRTILTF  374 (374)
T ss_dssp             GGCCHHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHTTCCSEEEEEC
T ss_pred             CCCChHHHHHHHHHHHHcCCCCchhheEEEEeHHHHHHHHHHHHCCCcceEEEeC
Confidence            5433345789999999999998888899999999999999999988878999875

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=6.9e-62  Score=446.64  Aligned_cols=344  Identities=51%  Similarity=0.902  Sum_probs=299.1

Q ss_pred             cccchhcceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchh-hhccCCCCCCCCcccccceeEEEEEeCCCC
Q 018529            5 AGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLY-FWESKGQTPLFPRIFGHEAAGVVESVGEGV   83 (354)
Q Consensus         5 ~~~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~-~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~   83 (354)
                      ...||+|||+++.+++++++++++|.|+|+++||+|||.++|||++|++ ++.|..+ ..+|.++|||++|+|+++|+++
T Consensus         3 ~~~~~~mka~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~-~~~P~v~GhE~~G~V~~vG~~V   81 (374)
T 1cdo_A            3 VGKVIKCKAAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHK-DGFPVVLGHEGAGIVESVGPGV   81 (374)
T ss_dssp             TTSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTTCCT-TSCSEECCCCEEEEEEEECTTC
T ss_pred             CCCcceeEEEEEecCCCCeEEEEeeCCCCCCCEEEEEEeEEeechhhHHHHhCCCCC-CCCCcccCccceEEEEEECCCC
Confidence            4578999999999998779999999999999999999999999999999 8877554 5679999999999999999999


Q ss_pred             CCCCCCCEEEecccCCCCCCcccccCCCCCC-ccc------c------------------cccccceeeEEeeccceEEC
Q 018529           84 SDLEVGDHVLPVFTGECGDCRHCRFSINGEP-VNH------F------------------LGTSTFSEYTVVHSGCVAKI  138 (354)
Q Consensus        84 ~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~-~~~------~------------------~~~g~~a~~~~v~~~~~~~~  138 (354)
                      ++|++||||++.+..+|+.|.+|+.+....+ ...      .                  ...|+|+||+.+|++.++++
T Consensus        82 ~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~~  161 (374)
T 1cdo_A           82 TEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKI  161 (374)
T ss_dssp             CSCCTTCEEEECSSCCCSSSHHHHCTTCCCCSCSGGGTCTTTTSCSCCCEEETTEEEEEGGGTCCSBSEEEEEGGGEEEC
T ss_pred             ccCCCCCEEEeCCCCCCCCChhhcCCCcCcCCCcccccccccccCCccccccCCcccccccCCccceeEEEEchhheEEC
Confidence            9999999999999999999999987654322 111      1                  12489999999999999999


Q ss_pred             CCCCCccchhhcccchhhhhhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceE
Q 018529          139 NPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF  218 (354)
Q Consensus       139 P~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v  218 (354)
                      |+++++++||++++++.|||+++.+.+++++|++|||+|+|++|++++|+|+.+|+.+|++++++++++++++++|++++
T Consensus       162 P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~v  241 (374)
T 1cdo_A          162 DPSAPLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDF  241 (374)
T ss_dssp             CTTCCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEE
T ss_pred             CCCCCHHHHhhhccHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCceE
Confidence            99999999999999999999998788999999999999999999999999999999789999999999999999999999


Q ss_pred             EcCCCCChhHHHHHHHHcCCCccEEEEcccChHhHHHHHHHhhCCC-ceEEEEcCCCCCceeecchhhhc-cccEEEEEe
Q 018529          219 VNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGW-GVAVLVGVPSKDAVFMTKPINVL-NERTLKGTF  296 (354)
Q Consensus       219 ~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~-g~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g~~  296 (354)
                      +++.+.+.++.+.+++++++++|+|||++|.+..++.+++++++ + |+++.+|.... ....+....+. ++ ++.|++
T Consensus       242 i~~~~~~~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~-~~G~iv~~G~~~~-~~~~~~~~~~~~~~-~i~g~~  318 (374)
T 1cdo_A          242 VNPNDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLK-GWGVSVLVGWTDL-HDVATRPIQLIAGR-TWKGSM  318 (374)
T ss_dssp             ECGGGCSSCHHHHHHHHHTSCBSEEEECSCCHHHHHHHHHTBCT-TTCEEEECSCCSS-SCEEECHHHHHTTC-EEEECS
T ss_pred             EeccccchhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhc-CCcEEEEEcCCCC-CCcccCHHHHhcCC-eEEEEe
Confidence            98875223488888888877999999999997889999999999 6 99999997653 23334443333 66 999987


Q ss_pred             ccCCCCCCCHHHHHHHHHccCCCCCCceeeeeccccHHHHHHHHhcCCceeEEEec
Q 018529          297 FGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISM  352 (354)
Q Consensus       297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~~k~vi~~  352 (354)
                      ++.+..+++++++++++.++++++.++++++|||+|+++||+.+.+++.+|+||+|
T Consensus       319 ~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvi~~  374 (374)
T 1cdo_A          319 FGGFKGKDGVPKMVKAYLDKKVKLDEFITHRMPLESVNDAIDLMKHGKCIRTVLSL  374 (374)
T ss_dssp             GGGCCHHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHTTCCSEEEEEC
T ss_pred             cCCCCcHHHHHHHHHHHHcCCCChHHheeeEecHHHHHHHHHHHHCCCeeEEEEeC
Confidence            65433345789999999999998888899999999999999999988878999875

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=100.00  E-value=3.2e-61  Score=440.79  Aligned_cols=338  Identities=23%  Similarity=0.356  Sum_probs=295.3

Q ss_pred             cccchhcceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCC
Q 018529            5 AGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVS   84 (354)
Q Consensus         5 ~~~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   84 (354)
                      ..+|++|||+++.+++. ++++++|.|+|++|||+|||.+++||++|++++.|.. ...+|.++|||++|+|+++|++++
T Consensus        18 ~~~p~~mkA~v~~~~~~-l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~-~~~~p~v~G~e~~G~V~~vG~~v~   95 (370)
T 4ej6_A           18 LYFQSMMKAVRLESVGN-ISVRNVGIPEPGPDDLLVKVEACGICGTDRHLLHGEF-PSTPPVTLGHEFCGIVVEAGSAVR   95 (370)
T ss_dssp             ---CCEEEEEEEEETTE-EEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTSS-CCCSSEECCCSEEEEEEEECTTCC
T ss_pred             cccchheEEEEEecCCc-eEEEEccCCCCCCCeEEEEEEEEeecHHHHHHHcCCC-CCCCCeecCcceEEEEEEECCCCC
Confidence            45899999999999976 9999999999999999999999999999999998865 356799999999999999999999


Q ss_pred             CCCCCCEEEecccCCCCCCcccccCCCC-CC---cccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhh
Q 018529           85 DLEVGDHVLPVFTGECGDCRHCRFSING-EP---VNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGA  160 (354)
Q Consensus        85 ~~~~Gd~V~~~~~~~~~~c~~c~~~~~~-~~---~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~  160 (354)
                      +|++||||++.+..+|+.|++|+.+... |.   ..+....|+|+||+.+|++.++++|+++++++|| +..++++||++
T Consensus        96 ~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa-l~~~~~ta~~~  174 (370)
T 4ej6_A           96 DIAPGARITGDPNISCGRCPQCQAGRVNLCRNLRAIGIHRDGGFAEYVLVPRKQAFEIPLTLDPVHGA-FCEPLACCLHG  174 (370)
T ss_dssp             SSCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGEEEECTTSCTTGGG-GHHHHHHHHHH
T ss_pred             CCCCCCEEEECCCCCCCCChHHhCcCcccCCCccccCCCCCCcceEEEEEchhhEEECCCCCCHHHHh-hhhHHHHHHHH
Confidence            9999999999999999999999866532 22   2334456999999999999999999999999998 66699999999


Q ss_pred             hhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHH---HcC
Q 018529          161 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAE---MTN  237 (354)
Q Consensus       161 l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~---~~~  237 (354)
                      + +.+++++|++|||+|+|++|++++|+|+.+|+++|+++++++++.++++++|++.++++.+.+  +.+.+++   +++
T Consensus       175 l-~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~--~~~~i~~~~~~~~  251 (370)
T 4ej6_A          175 V-DLSGIKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATVDPSAGD--VVEAIAGPVGLVP  251 (370)
T ss_dssp             H-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTSSC--HHHHHHSTTSSST
T ss_pred             H-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEECCCCcC--HHHHHHhhhhccC
Confidence            6 789999999999999999999999999999998899999999999999999999999988766  8888888   777


Q ss_pred             CCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhh-ccccEEEEEeccCCCCCCCHHHHHHHHHcc
Q 018529          238 GGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFFGNYKPRTDLPSVVDMYMNK  316 (354)
Q Consensus       238 ~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~  316 (354)
                      +++|+|||++|+...++.++++++++ |+++.+|.........+....+ .+++++.|++...    ++++++++++.+|
T Consensus       252 gg~Dvvid~~G~~~~~~~~~~~l~~~-G~vv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~----~~~~~~~~l~~~g  326 (370)
T 4ej6_A          252 GGVDVVIECAGVAETVKQSTRLAKAG-GTVVILGVLPQGEKVEIEPFDILFRELRVLGSFINP----FVHRRAADLVATG  326 (370)
T ss_dssp             TCEEEEEECSCCHHHHHHHHHHEEEE-EEEEECSCCCTTCCCCCCHHHHHHTTCEEEECCSCT----TCHHHHHHHHHTT
T ss_pred             CCCCEEEECCCCHHHHHHHHHHhccC-CEEEEEeccCCCCccccCHHHHHhCCcEEEEeccCh----HHHHHHHHHHHcC
Confidence            79999999999888999999999997 9999999876433444444444 4899999987533    5799999999999


Q ss_pred             CCCCCCceeeeeccccHHHHHHHHhcCCc--eeEEEecC
Q 018529          317 QLELEKFITHRIPFSEINKAFEYMVKGEG--LRCIISME  353 (354)
Q Consensus       317 ~~~~~~~v~~~~~l~~~~~a~~~~~~~~~--~k~vi~~~  353 (354)
                      ++++.++++++|||+++++||+.+.+++.  +|++++++
T Consensus       327 ~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~kvv~~~~  365 (370)
T 4ej6_A          327 AIEIDRMISRRISLDEAPDVISNPAAAGEVKVLVIPSAE  365 (370)
T ss_dssp             CSCCGGGEEEEECGGGHHHHHHSCCCTTCSEEEECCC--
T ss_pred             CCChhHcEEEEEEHHHHHHHHHHHHcCCCCeEEEEEccc
Confidence            99999999999999999999999987764  57777765

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=100.00  E-value=4.6e-60  Score=432.98  Aligned_cols=340  Identities=23%  Similarity=0.320  Sum_probs=289.5

Q ss_pred             CCCccccchhcceeeeccCCCceEEEEeecC--------CCCCCeEEEEEeeeecCccchhhhccCC---CCCCCCcccc
Q 018529            1 MSSTAGLILTCKAAVAWEAGKPLIIQDVEVA--------PPQAMEVRIKIKYTSLCRTDLYFWESKG---QTPLFPRIFG   69 (354)
Q Consensus         1 m~~~~~~~~~~~a~~~~~~~~~l~~~~~~~p--------~~~~~evlV~v~~~~i~~~D~~~~~~~~---~~~~~p~~~G   69 (354)
                      |++  ++|++|||+++.+++. +++.++|.|        +|++|||||||.++|||++|++++.+..   ....+|.++|
T Consensus         1 m~~--~~~~~mka~~~~~~~~-l~~~~~~~P~~~~~~~~~~~~~eVlVkv~a~gi~~~D~~~~~~~~~~~~~~~~p~v~G   77 (363)
T 3m6i_A            1 MAS--SASKTNIGVFTNPQHD-LWISEASPSLESVQKGEELKEGEVTVAVRSTGICGSDVHFWKHGCIGPMIVECDHVLG   77 (363)
T ss_dssp             ------CCSCCEEEEECTTCC-EEEEECSSCHHHHHHTCSCCTTEEEEEEEEEECCHHHHHHHHHSBSSSCBCCSCEECC
T ss_pred             CCC--CCcccceeEEEeCCCc-EEEEEecCCccccccCCCcCCCeEEEEEeEEeecHhhHHHHcCCCCCCccCCCCcccC
Confidence            554  3789999999998877 999999999        9999999999999999999999887432   1245799999


Q ss_pred             cceeEEEEEeCCCCCCCCCCCEEEecccCCCCCCcccccCCCC-CCccccc----ccccceeeEEeeccceEECCCCCCc
Q 018529           70 HEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRFSING-EPVNHFL----GTSTFSEYTVVHSGCVAKINPLAPL  144 (354)
Q Consensus        70 ~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~-~~~~~~~----~~g~~a~~~~v~~~~~~~~P~~~~~  144 (354)
                      ||++|+|+++|+++++|++||||++.+..+|+.|.+|+.+... |....+.    ..|+|+||+.+|++.++++|+ +++
T Consensus        78 ~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~-~s~  156 (363)
T 3m6i_A           78 HESAGEVIAVHPSVKSIKVGDRVAIEPQVICNACEPCLTGRYNGCERVDFLSTPPVPGLLRRYVNHPAVWCHKIGN-MSY  156 (363)
T ss_dssp             CEEEEEEEEECTTCCSCCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEETTSTTSCCSCBSEEEEEGGGEEECTT-CCH
T ss_pred             cceEEEEEEECCCCCCCCCCCEEEEecccCCCCCHHHHCcCcccCCCccccCCCCCCccceeEEEEehhhEEECCC-CCH
Confidence            9999999999999999999999999999999999999866532 3322222    459999999999999999999 999


Q ss_pred             cchhhcccchhhhhhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCC-
Q 018529          145 DKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE-  223 (354)
Q Consensus       145 ~~aa~l~~~~~~a~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~-  223 (354)
                      ++||++. +++|||+++ +.+++++|++|||+|+|++|++++|+|+.+|+++|++++++++|+++++++ ++.++++.. 
T Consensus       157 ~~aa~~~-~~~ta~~~l-~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-~~~~~~~~~~  233 (363)
T 3m6i_A          157 ENGAMLE-PLSVALAGL-QRAGVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI-CPEVVTHKVE  233 (363)
T ss_dssp             HHHHHHH-HHHHHHHHH-HHHTCCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH-CTTCEEEECC
T ss_pred             HHHHhhh-HHHHHHHHH-HHcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-chhccccccc
Confidence            9999884 889999996 789999999999999999999999999999996699999999999999999 766655431 


Q ss_pred             --CChhHHHHHHHHcCC-CccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhh-hccccEEEEEeccC
Q 018529          224 --HDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGN  299 (354)
Q Consensus       224 --~~~~~~~~i~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~  299 (354)
                        .+.++.+.+++++++ ++|+|||++|++..++.++++++++ |+++.+|.......  +.... +.+++++.|++.. 
T Consensus       234 ~~~~~~~~~~v~~~t~g~g~Dvvid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~--~~~~~~~~~~~~i~g~~~~-  309 (363)
T 3m6i_A          234 RLSAEESAKKIVESFGGIEPAVALECTGVESSIAAAIWAVKFG-GKVFVIGVGKNEIQ--IPFMRASVREVDLQFQYRY-  309 (363)
T ss_dssp             SCCHHHHHHHHHHHTSSCCCSEEEECSCCHHHHHHHHHHSCTT-CEEEECCCCCSCCC--CCHHHHHHHTCEEEECCSC-
T ss_pred             ccchHHHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCC-CEEEEEccCCCCcc--ccHHHHHhcCcEEEEccCC-
Confidence              225688899999977 9999999999977899999999997 99999997654333  33322 4489999987643 


Q ss_pred             CCCCCCHHHHHHHHHccCCCCCCceeeeeccccHHHHHHHHhcCC--ceeEEEecCC
Q 018529          300 YKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGE--GLRCIISMED  354 (354)
Q Consensus       300 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~--~~k~vi~~~d  354 (354)
                         .++++++++++.+|++++.++++++|+|+++++||+.+.+++  .+|+||+++|
T Consensus       310 ---~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~Kvvi~~~~  363 (363)
T 3m6i_A          310 ---CNTWPRAIRLVENGLVDLTRLVTHRFPLEDALKAFETASDPKTGAIKVQIQSLE  363 (363)
T ss_dssp             ---SSCHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHCGGGCCSEEEEECC-
T ss_pred             ---HHHHHHHHHHHHhCCCChHHceeeeeeHHHHHHHHHHHhccCCCeEEEEEecCC
Confidence               578999999999999998889999999999999999998863  3699999875

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=100.00  E-value=1.2e-59  Score=427.65  Aligned_cols=336  Identities=27%  Similarity=0.351  Sum_probs=284.1

Q ss_pred             chhcceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhcc-CCC--CCCCCcccccceeEEEEEeCCCCC
Q 018529            8 ILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWES-KGQ--TPLFPRIFGHEAAGVVESVGEGVS   84 (354)
Q Consensus         8 ~~~~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~-~~~--~~~~p~~~G~e~~G~V~~vG~~~~   84 (354)
                      +++|||+++.+++..+++.++|.|+|++|||+|||.++|||++|++.+.| ..+  ...+|.++|||++|+|+++|++++
T Consensus         2 m~~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~v~   81 (348)
T 2d8a_A            2 SEKMVAIMKTKPGYGAELVEVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIMGHEVAGEVVEIGPGVE   81 (348)
T ss_dssp             -CEEEEEEECSSSSSCEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCTTHHHHCCSSEECCCEEEEEEEEECTTCC
T ss_pred             CCcceEEEEECCCCCEEEEECCCCCCCcCEEEEEEeEEEecHHHHHHHcCCCCCcccCCCCCccCccceEEEEEECCCCC
Confidence            45799999999985599999999999999999999999999999999887 322  245789999999999999999999


Q ss_pred             CCCCCCEEEecccCCCCCCcccccCCCC-CCcc---cccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhh
Q 018529           85 DLEVGDHVLPVFTGECGDCRHCRFSING-EPVN---HFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGA  160 (354)
Q Consensus        85 ~~~~Gd~V~~~~~~~~~~c~~c~~~~~~-~~~~---~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~  160 (354)
                      +|++||||++.+..+|++|.+|+.+... |...   +....|+|+||+++|++.++++|+++++++||+++ +++|||++
T Consensus        82 ~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~-~~~ta~~~  160 (348)
T 2d8a_A           82 GIEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGVFAEYAVVPAQNIWKNPKSIPPEYATLQE-PLGNAVDT  160 (348)
T ss_dssp             SCCTTCEEEECCEECCSCCC------------CEETTTSSCCSSBSEEEEEGGGEEECCTTSCHHHHTTHH-HHHHHHHH
T ss_pred             cCCCCCEEEEcCCCCCCCChhhhCcCcccCCCCCeecCCCCCcCcceEEeChHHeEECCCCCCHHHHHhhh-HHHHHHHH
Confidence            9999999999999999999999877543 2222   22345999999999999999999999999999886 88899999


Q ss_pred             hhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC-C
Q 018529          161 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-G  239 (354)
Q Consensus       161 l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~  239 (354)
                      + +.+++ +|++|||+|+|++|++++|+|+.+|+.+|++++++++++++++++|+++++++.+.+  +.+.+++++++ +
T Consensus       161 l-~~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~--~~~~v~~~~~g~g  236 (348)
T 2d8a_A          161 V-LAGPI-SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPFEED--VVKEVMDITDGNG  236 (348)
T ss_dssp             H-TTSCC-TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTCSEEECTTTSC--HHHHHHHHTTTSC
T ss_pred             H-HhcCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCCCcC--HHHHHHHHcCCCC
Confidence            7 77889 999999999999999999999999987799999999999999999999999887755  88889998887 8


Q ss_pred             ccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecch-hh-hccccEEEEEeccCCCCCCCHHHHHHHHHccC
Q 018529          240 VDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP-IN-VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQ  317 (354)
Q Consensus       240 ~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~-~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~  317 (354)
                      +|+|||++|.++.++.++++++++ |+++.+|.....  ..+.. .. +.+++++.|++...  ..++++++++++.+|+
T Consensus       237 ~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~g~~~~~--~~~~~~~~~~~~~~~i~g~~~~~--~~~~~~~~~~l~~~g~  311 (348)
T 2d8a_A          237 VDVFLEFSGAPKALEQGLQAVTPA-GRVSLLGLYPGK--VTIDFNNLIIFKALTIYGITGRH--LWETWYTVSRLLQSGK  311 (348)
T ss_dssp             EEEEEECSCCHHHHHHHHHHEEEE-EEEEECCCCSSC--CCCCHHHHTTTTTCEEEECCCCC--SHHHHHHHHHHHHHTC
T ss_pred             CCEEEECCCCHHHHHHHHHHHhcC-CEEEEEccCCCC--cccCchHHHHhCCcEEEEecCCC--cHHHHHHHHHHHHcCC
Confidence            999999999988899999999997 999999976532  23333 22 35899999976432  1356899999999999


Q ss_pred             CCCCCceeeeec-cccHHHHHHHHhcCCceeEEEecC
Q 018529          318 LELEKFITHRIP-FSEINKAFEYMVKGEGLRCIISME  353 (354)
Q Consensus       318 ~~~~~~v~~~~~-l~~~~~a~~~~~~~~~~k~vi~~~  353 (354)
                      +++.+.++++|+ |+++++||+.+.++..+|+||+++
T Consensus       312 i~~~~~i~~~~~gl~~~~~A~~~~~~~~~gKvvi~~~  348 (348)
T 2d8a_A          312 LNLDPIITHKYKGFDKYEEAFELMRAGKTGKVVFMLK  348 (348)
T ss_dssp             CCCTTTEEEEEESSTTHHHHHHHHHTTCCSEEEEEC-
T ss_pred             CChHHhheeeCCCHHHHHHHHHHHhCCCceEEEEeeC
Confidence            888888999999 999999999998755679999864

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=100.00  E-value=6.4e-60  Score=430.09  Aligned_cols=335  Identities=23%  Similarity=0.350  Sum_probs=293.7

Q ss_pred             cceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchh-hhccCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 018529           11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLY-FWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG   89 (354)
Q Consensus        11 ~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~-~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~G   89 (354)
                      |||+++.++++ +++.++|.|+|++|||+|||.+++||++|++ ++.|..+ ..+|.++|||++|+|+++|+++++|++|
T Consensus         1 MkA~~~~~~~~-~~~~e~~~P~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~-~~~p~v~G~E~~G~V~~vG~~v~~~~vG   78 (352)
T 3fpc_A            1 MKGFAMLSIGK-VGWIEKEKPAPGPFDAIVRPLAVAPCTSDIHTVFEGAIG-ERHNMILGHEAVGEVVEVGSEVKDFKPG   78 (352)
T ss_dssp             CEEEEEEETTE-EEEEECCCCCCCTTCEEEEEEEEECCHHHHHHHHSCTTC-CCSSEECCCEEEEEEEEECTTCCSCCTT
T ss_pred             CeEEEEccCCC-ceEEeCCCCCCCCCeEEEEeCEEeEcccchHHHhCCCCC-CCCCcccCCcceEEEEEECCCCCcCCCC
Confidence            89999999998 9999999999999999999999999999999 5566544 4579999999999999999999999999


Q ss_pred             CEEEecccCCCCCCcccccCCCCCCc-------ccccccccceeeEEeecc--ceEECCCCCCccchhhcccchhhhhhh
Q 018529           90 DHVLPVFTGECGDCRHCRFSINGEPV-------NHFLGTSTFSEYTVVHSG--CVAKINPLAPLDKVCILSCGVSTGLGA  160 (354)
Q Consensus        90 d~V~~~~~~~~~~c~~c~~~~~~~~~-------~~~~~~g~~a~~~~v~~~--~~~~~P~~~~~~~aa~l~~~~~~a~~~  160 (354)
                      |||++.+..+|+.|.+|+.+....+.       .+....|+|+||+.+|++  .++++|+++++++|++++++++|||++
T Consensus        79 drV~~~~~~~c~~c~~c~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~a  158 (352)
T 3fpc_A           79 DRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNVKDGVFGEFFHVNDADMNLAHLPKEIPLEAAVMIPDMMTTGFHG  158 (352)
T ss_dssp             CEEEECSBCCCSSSHHHHTTCGGGTTSTTTTBCBTTTBCCSSBSCEEESSHHHHCEECCTTSCHHHHTTTTTHHHHHHHH
T ss_pred             CEEEEccccCCCCchhhcCCCcCCccccccccccccCCCCcccceEEeccccCeEEECCCCCCHHHHhhccchhHHHHHH
Confidence            99999999999999999876533221       222356999999999976  999999999999999999999999999


Q ss_pred             hhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC-C
Q 018529          161 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-G  239 (354)
Q Consensus       161 l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~  239 (354)
                      + +.+++++|++|||+|+|++|++++|+|+.+|+.+|++++++++|+++++++|+++++++.+.+  +.+.+++++++ +
T Consensus       159 l-~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~--~~~~v~~~t~g~g  235 (352)
T 3fpc_A          159 A-ELANIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKNGD--IVEQILKATDGKG  235 (352)
T ss_dssp             H-HHTTCCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTCCEEECGGGSC--HHHHHHHHTTTCC
T ss_pred             H-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEEcCCCcC--HHHHHHHHcCCCC
Confidence            6 789999999999999999999999999999997899999999999999999999999987765  88999999988 9


Q ss_pred             ccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhh---ccccEEEEEeccCCCCCCCHHHHHHHHHcc
Q 018529          240 VDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV---LNERTLKGTFFGNYKPRTDLPSVVDMYMNK  316 (354)
Q Consensus       240 ~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~---~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~  316 (354)
                      +|+|||++|++..++.++++++++ |+++.+|.......+++....+   .+++++.+++...  .+++++++++++.+|
T Consensus       236 ~D~v~d~~g~~~~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~--~~~~~~~~~~l~~~g  312 (352)
T 3fpc_A          236 VDKVVIAGGDVHTFAQAVKMIKPG-SDIGNVNYLGEGDNIDIPRSEWGVGMGHKHIHGGLCPG--GRLRMERLIDLVFYK  312 (352)
T ss_dssp             EEEEEECSSCTTHHHHHHHHEEEE-EEEEECCCCCSCSEEEEETTTTGGGTBCEEEEEBCCCC--HHHHHHHHHHHHHTT
T ss_pred             CCEEEECCCChHHHHHHHHHHhcC-CEEEEecccCCCCceecchhHhhhhccccEEEEeeccC--chhHHHHHHHHHHcC
Confidence            999999999988999999999997 9999999876544444443322   3788888876421  134689999999999


Q ss_pred             CCCCCCceeeeec-cccHHHHHHHHhcCCc--eeEEEecC
Q 018529          317 QLELEKFITHRIP-FSEINKAFEYMVKGEG--LRCIISME  353 (354)
Q Consensus       317 ~~~~~~~v~~~~~-l~~~~~a~~~~~~~~~--~k~vi~~~  353 (354)
                      ++++.++++++|+ |+++++||+.+.+++.  +|+||+++
T Consensus       313 ~i~~~~~i~~~~~gl~~~~~A~~~~~~~~~~~~Kvvi~~~  352 (352)
T 3fpc_A          313 RVDPSKLVTHVFRGFDNIEKAFMLMKDKPKDLIKPVVILA  352 (352)
T ss_dssp             SCCGGGGEEEEEESTTHHHHHHHHHHSCCTTCSEEEEECC
T ss_pred             CCChhHhheeeCCCHHHHHHHHHHHHhCCCCcEEEEEEeC
Confidence            9999888999999 9999999999988653  69999874

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=100.00  E-value=1.3e-59  Score=426.23  Aligned_cols=331  Identities=27%  Similarity=0.440  Sum_probs=290.9

Q ss_pred             hcceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCC-CCCCcccccceeEEEEEeCCCCCCCCC
Q 018529           10 TCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLEV   88 (354)
Q Consensus        10 ~~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~~~~~~~   88 (354)
                      +|||+++.+++++++++++|.|+|++|||||||.++|||++|++++.|..+. ..+|.++|||++|+|+++|+++++|++
T Consensus         2 ~MkA~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~P~v~G~E~~G~V~~vG~~v~~~~v   81 (340)
T 3s2e_A            2 MMKAAVVRAFGAPLTIDEVPVPQPGPGQVQVKIEASGVCHTDLHAADGDWPVKPTLPFIPGHEGVGYVSAVGSGVSRVKE   81 (340)
T ss_dssp             EEEEEEBCSTTSCCEEEEEECCCCCTTCEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSEEEEEEEEECSSCCSCCT
T ss_pred             ceEEEEEecCCCCCEEEEccCCCCCCCeEEEEEEEeccCHHHHHHHcCCCCCCCCCCcccCCcceEEEEEECCCCCcCCC
Confidence            6999999999888999999999999999999999999999999999987654 468999999999999999999999999


Q ss_pred             CCEE-EecccCCCCCCcccccCCCC-CC---cccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhh
Q 018529           89 GDHV-LPVFTGECGDCRHCRFSING-EP---VNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLN  163 (354)
Q Consensus        89 Gd~V-~~~~~~~~~~c~~c~~~~~~-~~---~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~  163 (354)
                      |||| +..+..+|+.|.+|+.+... |.   ..++...|+|+||+.+|++.++++|+++++++||++++++.|||+++ +
T Consensus        82 GdrV~~~~~~~~cg~C~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l-~  160 (340)
T 3s2e_A           82 GDRVGVPWLYSACGYCEHCLQGWETLCEKQQNTGYSVNGGYGEYVVADPNYVGLLPDKVGFVEIAPILCAGVTVYKGL-K  160 (340)
T ss_dssp             TCEEEEESEEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEECTTTSEECCTTSCHHHHGGGGTHHHHHHHHH-H
T ss_pred             CCEEEecCCCCCCCCChHHhCcCcccCccccccCCCCCCcceeEEEechHHEEECCCCCCHHHhhcccchhHHHHHHH-H
Confidence            9999 56778899999999876532 22   23344569999999999999999999999999999999999999996 6


Q ss_pred             hcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEE
Q 018529          164 VAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRS  243 (354)
Q Consensus       164 ~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv  243 (354)
                      ..++++|++|||+|+|++|++++|+|+.+|+ +|++++++++++++++++|+++++++.+.+  +.+.+++. .+++|+|
T Consensus       161 ~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~--~~~~~~~~-~g~~d~v  236 (340)
T 3s2e_A          161 VTDTRPGQWVVISGIGGLGHVAVQYARAMGL-RVAAVDIDDAKLNLARRLGAEVAVNARDTD--PAAWLQKE-IGGAHGV  236 (340)
T ss_dssp             TTTCCTTSEEEEECCSTTHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTCSEEEETTTSC--HHHHHHHH-HSSEEEE
T ss_pred             HcCCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHcCCCEEEeCCCcC--HHHHHHHh-CCCCCEE
Confidence            7899999999999999999999999999999 999999999999999999999999998765  88888884 3489999


Q ss_pred             EEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhh-hccccEEEEEeccCCCCCCCHHHHHHHHHccCCCCCC
Q 018529          244 VECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEK  322 (354)
Q Consensus       244 ~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  322 (354)
                      ||++|+.+.++.++++++++ |+++.+|.....  ..+.... +.+++++.|++...   +++++++++++.+|++++. 
T Consensus       237 id~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~--~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~l~~~g~l~~~-  309 (340)
T 3s2e_A          237 LVTAVSPKAFSQAIGMVRRG-GTIALNGLPPGD--FGTPIFDVVLKGITIRGSIVGT---RSDLQESLDFAAHGDVKAT-  309 (340)
T ss_dssp             EESSCCHHHHHHHHHHEEEE-EEEEECSCCSSE--EEEEHHHHHHTTCEEEECCSCC---HHHHHHHHHHHHTTSCCCC-
T ss_pred             EEeCCCHHHHHHHHHHhccC-CEEEEeCCCCCC--CCCCHHHHHhCCeEEEEEecCC---HHHHHHHHHHHHhCCCCce-
Confidence            99999989999999999997 999999976533  3333333 34899999987543   3579999999999988763 


Q ss_pred             ceeeeeccccHHHHHHHHhcCCc-eeEEEecCC
Q 018529          323 FITHRIPFSEINKAFEYMVKGEG-LRCIISMED  354 (354)
Q Consensus       323 ~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~~~d  354 (354)
                        .++|+|+++++||+.+.+++. +|+||++++
T Consensus       310 --~~~~~l~~~~~A~~~~~~~~~~Gkvvv~~~~  340 (340)
T 3s2e_A          310 --VSTAKLDDVNDVFGRLREGKVEGRVVLDFSR  340 (340)
T ss_dssp             --EEEECGGGHHHHHHHHHTTCCCSEEEEECCC
T ss_pred             --EEEEeHHHHHHHHHHHHcCCCceEEEEecCC
Confidence              578899999999999998885 799999875

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=100.00  E-value=3.1e-59  Score=426.02  Aligned_cols=336  Identities=23%  Similarity=0.394  Sum_probs=288.8

Q ss_pred             chhcceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCC-C--CCCCCcccccceeEEEEEeCCCCC
Q 018529            8 ILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKG-Q--TPLFPRIFGHEAAGVVESVGEGVS   84 (354)
Q Consensus         8 ~~~~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~-~--~~~~p~~~G~e~~G~V~~vG~~~~   84 (354)
                      .|+|||+++.+++. +++.++|.|+|++|||+|||.++|||++|++++.+.. .  ...+|.++|||++|+|+++|++++
T Consensus         5 ~~~mka~~~~~~~~-l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~V~   83 (356)
T 1pl8_A            5 KPNNLSLVVHGPGD-LRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSVK   83 (356)
T ss_dssp             CCCCEEEEEEETTE-EEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSEETTEECSSCEECCCEEEEEEEEECTTCC
T ss_pred             ccCceEEEEecCCc-EEEEEccCCCCCCCeEEEEEEEeeeCHHHHHHHcCCCCCCccCCCCcccccceEEEEEEECCCCC
Confidence            47899999999875 9999999999999999999999999999999887532 1  135689999999999999999999


Q ss_pred             CCCCCCEEEecccCCCCCCcccccCCCC-CCccccc----ccccceeeEEeeccceEECCCCCCccchhhcccchhhhhh
Q 018529           85 DLEVGDHVLPVFTGECGDCRHCRFSING-EPVNHFL----GTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLG  159 (354)
Q Consensus        85 ~~~~Gd~V~~~~~~~~~~c~~c~~~~~~-~~~~~~~----~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~  159 (354)
                      +|++||||++.+..+|++|.+|+.+... |......    ..|+|+||+.+|++.++++|+++++++|+.+ .++++||+
T Consensus        84 ~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~~-~~~~ta~~  162 (356)
T 1pl8_A           84 HLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGNLCRFYKHNAAFCYKLPDNVTFEEGALI-EPLSVGIH  162 (356)
T ss_dssp             SCCTTCEEEECSEECSSCCHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTSCHHHHHHH-HHHHHHHH
T ss_pred             CCCCCCEEEEeccCCCCCChHHHCcCcccCCCccccCcCCCCCccccEEEeehHHEEECcCCCCHHHHHhh-chHHHHHH
Confidence            9999999999999999999999876532 3322222    3599999999999999999999999999876 48889999


Q ss_pred             hhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCC-hhHHHHHHHHcCC
Q 018529          160 ATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHD-RPIQEVIAEMTNG  238 (354)
Q Consensus       160 ~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~-~~~~~~i~~~~~~  238 (354)
                      ++ +.+++++|++|||+|+|++|++++|+|+.+|+++|++++++++++++++++|+++++++...+ .++.+.+++.+++
T Consensus       163 al-~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~i~~~~~~  241 (356)
T 1pl8_A          163 AC-RRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGC  241 (356)
T ss_dssp             HH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEECSSCCHHHHHHHHHHHHTS
T ss_pred             HH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCcccccchHHHHHHHHhCC
Confidence            97 788999999999999999999999999999998899999999999999999999999887311 3477788887766


Q ss_pred             CccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhh-hccccEEEEEeccCCCCCCCHHHHHHHHHccC
Q 018529          239 GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQ  317 (354)
Q Consensus       239 ~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~  317 (354)
                      ++|+|||++|++..++.++++++++ |+++.+|.....  ..+.... +.+++++.|++..    .++++++++++.+|+
T Consensus       242 g~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~--~~~~~~~~~~~~~~i~g~~~~----~~~~~~~~~l~~~g~  314 (356)
T 1pl8_A          242 KPEVTIECTGAEASIQAGIYATRSG-GTLVLVGLGSEM--TTVPLLHAAIREVDIKGVFRY----CNTWPVAISMLASKS  314 (356)
T ss_dssp             CCSEEEECSCCHHHHHHHHHHSCTT-CEEEECSCCCSC--CCCCHHHHHHTTCEEEECCSC----SSCHHHHHHHHHTTS
T ss_pred             CCCEEEECCCChHHHHHHHHHhcCC-CEEEEEecCCCC--CccCHHHHHhcceEEEEeccc----HHHHHHHHHHHHcCC
Confidence            8999999999977899999999997 999999974422  2333332 3489999987642    467999999999999


Q ss_pred             CCCCCceeeeeccccHHHHHHHHhcCCceeEEEecC
Q 018529          318 LELEKFITHRIPFSEINKAFEYMVKGEGLRCIISME  353 (354)
Q Consensus       318 ~~~~~~v~~~~~l~~~~~a~~~~~~~~~~k~vi~~~  353 (354)
                      +++.++++++|+|+++++||+.+.++..+|+||+++
T Consensus       315 i~~~~~i~~~~~l~~~~~A~~~~~~~~~gKvvi~~~  350 (356)
T 1pl8_A          315 VNVKPLVTHRFPLEKALEAFETFKKGLGLKIMLKCD  350 (356)
T ss_dssp             CCCGGGEEEEEEGGGHHHHHHHHHTTCCSEEEEECC
T ss_pred             CChHHheEEEecHHHHHHHHHHHhCCCceEEEEeCC
Confidence            988888999999999999999998885579999875

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=100.00  E-value=5.4e-59  Score=423.48  Aligned_cols=335  Identities=24%  Similarity=0.338  Sum_probs=290.4

Q ss_pred             cceeeeccCCCceEEEEeecCC-CCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 018529           11 CKAAVAWEAGKPLIIQDVEVAP-PQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG   89 (354)
Q Consensus        11 ~~a~~~~~~~~~l~~~~~~~p~-~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~G   89 (354)
                      |||+++.+++. ++++++|+|+ ++||||||||.|+|||++|++.+.+..+ ..+|+++|||++|+|+++|++++++++|
T Consensus         1 MkAvv~~~~g~-l~v~e~p~P~~~~~~eVlVkv~a~gi~~sD~~~~~g~~~-~~~P~i~G~E~~G~V~~vG~~V~~~~~G   78 (346)
T 4a2c_A            1 MKSVVNDTDGI-VRVAESVIPEIKHQDEVRVKIASSGLCGSDLPRIFKNGA-HYYPITLGHEFSGYIDAVGSGVDDLHPG   78 (346)
T ss_dssp             CEEEEECSSSC-EEEEECCCCCCCSTTEEEEEEEEEECCTTHHHHHHSSCS-SSSSBCCCCEEEEEEEEECTTCCSCCTT
T ss_pred             CCEEEEecCCC-EEEEEEeCCCCCCcCEEEEEEEEEEECHHHHHHHcCCCC-CCCCccccEEEEEEEEEECCCcccccCC
Confidence            89999999987 9999999998 5799999999999999999998887654 4679999999999999999999999999


Q ss_pred             CEEEecccCCCCCCcccccCCCC-CC---cccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhc
Q 018529           90 DHVLPVFTGECGDCRHCRFSING-EP---VNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVA  165 (354)
Q Consensus        90 d~V~~~~~~~~~~c~~c~~~~~~-~~---~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~  165 (354)
                      |+|.+.+...|++|.+|..+... |.   ..+....|+|+||+.+|++.++++|+++++++||+++ .+.+++++ .+..
T Consensus        79 drV~~~~~~~~g~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~-~~~~~~~~-~~~~  156 (346)
T 4a2c_A           79 DAVACVPLLPCFTCPECLKGFYSQCAKYDFIGSRRDGGFAEYIVVKRKNVFALPTDMPIEDGAFIE-PITVGLHA-FHLA  156 (346)
T ss_dssp             CEEEECCEECCSCSHHHHTTCGGGCSSCEEBTTTBCCSSBSEEEEEGGGEEECCTTSCGGGGGGHH-HHHHHHHH-HHHT
T ss_pred             CeEEeeeccCCCCcccccCCccccCCCcccccCCCCcccccccccchheEEECCCCCCHHHHHhch-HHHHHHHH-HHHh
Confidence            99999999999999999766432 22   2334456999999999999999999999999999876 44555554 6788


Q ss_pred             CCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC-CccEEE
Q 018529          166 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSV  244 (354)
Q Consensus       166 ~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~~dvv~  244 (354)
                      ++++|++|||+|+|++|++++|+|+++|+..+++++++++|+++++++|+++++++.+.+  +.+.++.++++ ++|+||
T Consensus       157 ~~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~lGa~~~i~~~~~~--~~~~~~~~~~~~g~d~v~  234 (346)
T 4a2c_A          157 QGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSSEMS--APQMQSVLRELRFNQLIL  234 (346)
T ss_dssp             TCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEETTTSC--HHHHHHHHGGGCSSEEEE
T ss_pred             ccCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHcCCeEEEeCCCCC--HHHHHHhhcccCCccccc
Confidence            999999999999999999999999999998889999999999999999999999998877  77788888877 999999


Q ss_pred             EcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecch-h-hhccccEEEEEeccCCC--CCCCHHHHHHHHHccCCCC
Q 018529          245 ECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP-I-NVLNERTLKGTFFGNYK--PRTDLPSVVDMYMNKQLEL  320 (354)
Q Consensus       245 d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~-~-~~~~~~~i~g~~~~~~~--~~~~~~~~~~~~~~~~~~~  320 (354)
                      |++|++..++.++++++++ |+++++|....+....... . .+.+++++.|++.....  ..++++++++++.+|++++
T Consensus       235 d~~G~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~k~~~i~G~~~~~~~~~~~~~~~~~~~l~~~g~l~~  313 (346)
T 4a2c_A          235 ETAGVPQTVELAVEIAGPH-AQLALVGTLHQDLHLTSATFGKILRKELTVIGSWMNYSSPWPGQEWETASRLLTERKLSL  313 (346)
T ss_dssp             ECSCSHHHHHHHHHHCCTT-CEEEECCCCSSCEEECHHHHHHHHHHTCEEEECCTTCCSSTTCHHHHHHHHHHHTTCSCC
T ss_pred             ccccccchhhhhhheecCC-eEEEEEeccCCCccccccCHHHHhhceeEEEEEeccccCcchHHHHHHHHHHHHcCCCCC
Confidence            9999988999999999997 9999999876544333222 2 23489999998764332  2356899999999999999


Q ss_pred             CCceeeeeccccHHHHHHHHhcCCc-eeEEEec
Q 018529          321 EKFITHRIPFSEINKAFEYMVKGEG-LRCIISM  352 (354)
Q Consensus       321 ~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~~  352 (354)
                      .++++++|+|+|+++||+.+.+++. +|+||++
T Consensus       314 ~~lI~~~~~l~~~~~A~~~l~~~~~~GKvVl~P  346 (346)
T 4a2c_A          314 EPLIAHRGSFESFAQAVRDIARNAMPGKVLLIP  346 (346)
T ss_dssp             GGGEEEEECHHHHHHHHHHHTTSCCCSEEEECC
T ss_pred             CccEeEEEeHHHHHHHHHHHHcCCCceEEEEEC
Confidence            9999999999999999999988775 6998863

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=100.00  E-value=5.9e-59  Score=422.75  Aligned_cols=330  Identities=22%  Similarity=0.328  Sum_probs=289.2

Q ss_pred             cceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCC--CCCCcccccceeEEEEEeCCCCCCCCC
Q 018529           11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT--PLFPRIFGHEAAGVVESVGEGVSDLEV   88 (354)
Q Consensus        11 ~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~--~~~p~~~G~e~~G~V~~vG~~~~~~~~   88 (354)
                      |||+++++++++++++++|.|+|++|||||||.++|||++|++++.|..+.  ..+|.++|||++|+|+++|+++++|++
T Consensus         1 MkA~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~v   80 (345)
T 3jv7_A            1 MKAVQYTEIGSEPVVVDIPTPTPGPGEILLKVTAAGLCHSDIFVMDMPAAQYAYGLPLTLGHEGVGTVAELGEGVTGFGV   80 (345)
T ss_dssp             CEEEEECSTTSCCEEEECCCCCCCTTCEEEEEEEEECCHHHHHHHHSCTTTCCSCSSEECCSEEEEEEEEECTTCCSCCT
T ss_pred             CeEEEEcCCCCceEEEEecCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCCccCCCCCcccCcccEEEEEEECCCCCCCCC
Confidence            899999999988999999999999999999999999999999999886542  467999999999999999999999999


Q ss_pred             CCEEEecccCCCCCCcccccCCCCCC-c--------ccccccccceeeEEee-ccceEECCCCCCccchhhcccchhhhh
Q 018529           89 GDHVLPVFTGECGDCRHCRFSINGEP-V--------NHFLGTSTFSEYTVVH-SGCVAKINPLAPLDKVCILSCGVSTGL  158 (354)
Q Consensus        89 Gd~V~~~~~~~~~~c~~c~~~~~~~~-~--------~~~~~~g~~a~~~~v~-~~~~~~~P~~~~~~~aa~l~~~~~~a~  158 (354)
                      ||||++.+..+|+.|.+|+.+....+ .        .+....|+|+||+.+| ++.++++|+ +++++||.++++++|||
T Consensus        81 GdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~~~p~-~~~~~aa~l~~~~~ta~  159 (345)
T 3jv7_A           81 GDAVAVYGPWGCGACHACARGRENYCTRAADLGITPPGLGSPGSMAEYMIVDSARHLVPIGD-LDPVAAAPLTDAGLTPY  159 (345)
T ss_dssp             TCEEEECCSCCCSSSHHHHTTCGGGCSSHHHHTCCCBTTTBCCSSBSEEEESCGGGEEECTT-CCHHHHGGGGTTTHHHH
T ss_pred             CCEEEEecCCCCCCChHHHCcCcCcCccccccccccCCcCCCceeeEEEEecchhceEeCCC-CCHHHhhhhhhhHHHHH
Confidence            99999999999999999987654322 1        2233569999999999 999999999 99999999999999999


Q ss_pred             hhhhh-hcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcC
Q 018529          159 GATLN-VAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTN  237 (354)
Q Consensus       159 ~~l~~-~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~  237 (354)
                      +++.+ ...+++|++|||+|+|++|++++|+|+.+|..+|++++++++|+++++++|++.++++.+   ++.+.++++++
T Consensus       160 ~~l~~~~~~~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa~~~i~~~~---~~~~~v~~~t~  236 (345)
T 3jv7_A          160 HAISRVLPLLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVKSGA---GAADAIRELTG  236 (345)
T ss_dssp             HHHHTTGGGCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTCSEEEECST---THHHHHHHHHG
T ss_pred             HHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcCCC---cHHHHHHHHhC
Confidence            99766 458999999999999999999999999995449999999999999999999999998865   38889999998


Q ss_pred             C-CccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhhccccEEEEEeccCCCCCCCHHHHHHHHHcc
Q 018529          238 G-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNK  316 (354)
Q Consensus       238 ~-~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~  316 (354)
                      + ++|+|||++|++..++.++++++++ |+++.+|..... ...++...+.+++++.+++...   .++++++++++.+|
T Consensus       237 g~g~d~v~d~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~-~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~l~~~g  311 (345)
T 3jv7_A          237 GQGATAVFDFVGAQSTIDTAQQVVAVD-GHISVVGIHAGA-HAKVGFFMIPFGASVVTPYWGT---RSELMEVVALARAG  311 (345)
T ss_dssp             GGCEEEEEESSCCHHHHHHHHHHEEEE-EEEEECSCCTTC-CEEESTTTSCTTCEEECCCSCC---HHHHHHHHHHHHTT
T ss_pred             CCCCeEEEECCCCHHHHHHHHHHHhcC-CEEEEECCCCCC-CCCcCHHHHhCCCEEEEEecCC---HHHHHHHHHHHHcC
Confidence            8 9999999999977999999999997 999999987641 2233333345899999877543   35799999999999


Q ss_pred             CCCCCCceeeeeccccHHHHHHHHhcCCc-eeEEEec
Q 018529          317 QLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM  352 (354)
Q Consensus       317 ~~~~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~~  352 (354)
                      ++++   ++++|+|+++++||+.+.+++. +|+||++
T Consensus       312 ~l~~---~~~~~~l~~~~~A~~~~~~~~~~Gkvvv~p  345 (345)
T 3jv7_A          312 RLDI---HTETFTLDEGPAAYRRLREGSIRGRGVVVP  345 (345)
T ss_dssp             CCCC---CEEEECSTTHHHHHHHHHHTCCSSEEEECC
T ss_pred             CCce---EEEEEcHHHHHHHHHHHHcCCCceeEEeCC
Confidence            8876   4589999999999999998875 6998864

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=8.5e-59  Score=422.68  Aligned_cols=333  Identities=25%  Similarity=0.391  Sum_probs=284.7

Q ss_pred             chhcceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccC-CC--CCCCCcccccceeEEEEEeCCCCC
Q 018529            8 ILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESK-GQ--TPLFPRIFGHEAAGVVESVGEGVS   84 (354)
Q Consensus         8 ~~~~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~-~~--~~~~p~~~G~e~~G~V~~vG~~~~   84 (354)
                      +++|||+++.+++. +++++.|.|+|+++||+|||.++|||++|++.+.+. ..  ...+|.++|||++|+|+++|++++
T Consensus         2 ~~~mka~~~~~~~~-l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~~~~~~~p~v~G~E~~G~V~~vG~~v~   80 (352)
T 1e3j_A            2 ASDNLSAVLYKQND-LRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNVK   80 (352)
T ss_dssp             --CCEEEEEEETTE-EEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSBSSSCBCCSCEECCCEEEEEEEEECTTCC
T ss_pred             cccCEEEEEEcCCc-EEEEEecCCCCCCCeEEEEEEEEEEChhhHHHHcCCCCccccCCCCccccccceEEEEEeCCCCC
Confidence            34799999999875 999999999999999999999999999999988743 21  135699999999999999999999


Q ss_pred             CCCCCCEEEecccCCCCCCcccccCCCC-CCccccc----ccccceeeEEeeccceEECCCCCCccchhhcccchhhhhh
Q 018529           85 DLEVGDHVLPVFTGECGDCRHCRFSING-EPVNHFL----GTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLG  159 (354)
Q Consensus        85 ~~~~Gd~V~~~~~~~~~~c~~c~~~~~~-~~~~~~~----~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~  159 (354)
                      +|++||||++.+..+|+.|.+|+.+... |....+.    ..|+|+||+.+|++.++++|+++++++||++ .++++||+
T Consensus        81 ~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~-~~~~ta~~  159 (352)
T 1e3j_A           81 HLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDDGNLARYYVHAADFCHKLPDNVSLEEGALL-EPLSVGVH  159 (352)
T ss_dssp             SCCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTSCHHHHHTH-HHHHHHHH
T ss_pred             CCCCCCEEEEcCcCCCCCChhhhCcCcccCCCCcccCcCCCCccceeEEEeChHHeEECcCCCCHHHHHhh-chHHHHHH
Confidence            9999999999999999999999876532 3222221    3599999999999999999999999999876 48889999


Q ss_pred             hhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCC-CChhHHHHHHHHcC-
Q 018529          160 ATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE-HDRPIQEVIAEMTN-  237 (354)
Q Consensus       160 ~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~-~~~~~~~~i~~~~~-  237 (354)
                      ++ +.+++++|++|||+|+|++|++++|+|+.+|+ +|++++++++++++++++|++.++++.+ .+  +.+.+++.++ 
T Consensus       160 al-~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~--~~~~i~~~~~~  235 (352)
T 1e3j_A          160 AC-RRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGA-FVVCTARSPRRLEVAKNCGADVTLVVDPAKE--EESSIIERIRS  235 (352)
T ss_dssp             HH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTCSEEEECCTTTS--CHHHHHHHHHH
T ss_pred             HH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHhCCCEEEcCccccc--HHHHHHHHhcc
Confidence            97 78899999999999999999999999999999 6999999999999999999999998874 33  6677777765 


Q ss_pred             --C-CccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhh-hccccEEEEEeccCCCCCCCHHHHHHHH
Q 018529          238 --G-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNYKPRTDLPSVVDMY  313 (354)
Q Consensus       238 --~-~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~~  313 (354)
                        + ++|+|||++|++..++.++++++++ |+++.+|.....  ..+.... +.+++++.|++..    .++++++++++
T Consensus       236 ~~g~g~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~--~~~~~~~~~~~~~~i~g~~~~----~~~~~~~~~l~  308 (352)
T 1e3j_A          236 AIGDLPNVTIDCSGNEKCITIGINITRTG-GTLMLVGMGSQM--VTVPLVNACAREIDIKSVFRY----CNDYPIALEMV  308 (352)
T ss_dssp             HSSSCCSEEEECSCCHHHHHHHHHHSCTT-CEEEECSCCSSC--CCCCHHHHHTTTCEEEECCSC----SSCHHHHHHHH
T ss_pred             ccCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCCCC--ccccHHHHHhcCcEEEEeccc----hHHHHHHHHHH
Confidence              4 8999999999977899999999997 999999975422  2233332 3488999987642    46799999999


Q ss_pred             HccCCCCCCceeeeeccccHHHHHHHHhcCC--ceeEEEecC
Q 018529          314 MNKQLELEKFITHRIPFSEINKAFEYMVKGE--GLRCIISME  353 (354)
Q Consensus       314 ~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~--~~k~vi~~~  353 (354)
                      .++++++.++++++|||+++++||+.+.+++  .+|+||+++
T Consensus       309 ~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~Kvvi~~~  350 (352)
T 1e3j_A          309 ASGRCNVKQLVTHSFKLEQTVDAFEAARKKADNTIKVMISCR  350 (352)
T ss_dssp             HTTSCCCGGGEEEEEEGGGHHHHHHHHHHCCTTCSEEEEECC
T ss_pred             HcCCCChHHheeEEecHHHHHHHHHHHhcCCCCceEEEEecC
Confidence            9999988888999999999999999998876  479999875

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.2e-58  Score=422.40  Aligned_cols=330  Identities=25%  Similarity=0.348  Sum_probs=281.4

Q ss_pred             cchhcceeeeccCCCceEEEEeecCC-CCCCeEEEEEeeeecCccchhhhccCCC---CCCCCcccccceeEEEEEeCCC
Q 018529            7 LILTCKAAVAWEAGKPLIIQDVEVAP-PQAMEVRIKIKYTSLCRTDLYFWESKGQ---TPLFPRIFGHEAAGVVESVGEG   82 (354)
Q Consensus         7 ~~~~~~a~~~~~~~~~l~~~~~~~p~-~~~~evlV~v~~~~i~~~D~~~~~~~~~---~~~~p~~~G~e~~G~V~~vG~~   82 (354)
                      .|++|||+++++++.+++++++|.|+ |++|||+|||.++|||++|++.+.|..+   ...+|.++|||++|+|+++|++
T Consensus        12 ~~~~mka~~~~~~g~~l~~~~~p~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~   91 (359)
T 1h2b_A           12 GVERLKAARLHEYNKPLRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEEVAEG   91 (359)
T ss_dssp             -----CEEEESSTTSCCEEECCCCCCCBTTBCEEEEEEEEECCHHHHHHHHTTTHHHHCCCSSEECCCCEEEEEEEECTT
T ss_pred             ChhhceEEEEecCCCCcEEEEccCCCCCCCCEEEEEEEEEEecccchHHHhCCCccccCCCCCeecCcCceEEEEEECCC
Confidence            57899999999998679999999999 9999999999999999999999988654   3467999999999999999999


Q ss_pred             CCCCCCCCEEEecccCCCCCCcccccCCCC-CCc---ccccccccceeeEEeeccceEECCCCCCccchh---hcccchh
Q 018529           83 VSDLEVGDHVLPVFTGECGDCRHCRFSING-EPV---NHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVC---ILSCGVS  155 (354)
Q Consensus        83 ~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~-~~~---~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa---~l~~~~~  155 (354)
                      +++|++||||++.+..+|+.|.+|+.+... |..   .+....|+|+||+.+|++.++++|+++++++||   .+++++.
T Consensus        92 v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~l~~~~~  171 (359)
T 1h2b_A           92 VEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGLNIDGGFAEFMRTSHRSVIKLPKDISREKLVEMAPLADAGI  171 (359)
T ss_dssp             CCSCCTTCEEEECSCBCCSCSHHHHTTCGGGCTTCBCBTTTBCCSSBSEEEECGGGEEECCTTCCHHHHHHTGGGGTHHH
T ss_pred             CCCCCCCCEEEeCCCCCCCCChhhhCcCcccCCCccccccCCCCcccceEEechHhEEECCCCCCHHHHhhccchhhhHH
Confidence            999999999999999999999999876532 222   223356999999999999999999999999999   7888999


Q ss_pred             hhhhhhhhh-cCCCCCCeEEEEcCChhHHHHHHHHHHc-CCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHH
Q 018529          156 TGLGATLNV-AKPERGSSVAVFGLGAVGLAAAEGARIA-GASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIA  233 (354)
Q Consensus       156 ~a~~~l~~~-~~~~~~~~vlI~G~g~~G~~a~~~a~~~-g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~  233 (354)
                      |||+++.+. +++++|++|||+|+|++|++++|+|+.+ |+ +|++++++++|+++++++|+++++++.+.   +.+.++
T Consensus       172 ta~~al~~~~~~~~~g~~VlV~GaG~vG~~avqlak~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~---~~~~v~  247 (359)
T 1h2b_A          172 TAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPA-TVIALDVKEEKLKLAERLGADHVVDARRD---PVKQVM  247 (359)
T ss_dssp             HHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHHCCC-EEEEEESSHHHHHHHHHTTCSEEEETTSC---HHHHHH
T ss_pred             HHHHHHHhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCC-eEEEEeCCHHHHHHHHHhCCCEEEeccch---HHHHHH
Confidence            999997655 8999999999999999999999999999 99 89999999999999999999999998753   778888


Q ss_pred             HHcCC-CccEEEEcccChH--hHHHHHHHhhCCCceEEEEcCCCCCceeecchhh-hccccEEEEEeccCCCCCCCHHHH
Q 018529          234 EMTNG-GVDRSVECTGNID--NMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNYKPRTDLPSV  309 (354)
Q Consensus       234 ~~~~~-~~dvv~d~~g~~~--~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~~~~~~~~~  309 (354)
                      +++++ ++|+|||++|++.  .++.++++  ++ |+++.+|.....   .+.... +.+++++.|++...   .++++++
T Consensus       248 ~~~~g~g~Dvvid~~G~~~~~~~~~~~~~--~~-G~~v~~g~~~~~---~~~~~~~~~~~~~i~g~~~~~---~~~~~~~  318 (359)
T 1h2b_A          248 ELTRGRGVNVAMDFVGSQATVDYTPYLLG--RM-GRLIIVGYGGEL---RFPTIRVISSEVSFEGSLVGN---YVELHEL  318 (359)
T ss_dssp             HHTTTCCEEEEEESSCCHHHHHHGGGGEE--EE-EEEEECCCSSCC---CCCHHHHHHTTCEEEECCSCC---HHHHHHH
T ss_pred             HHhCCCCCcEEEECCCCchHHHHHHHhhc--CC-CEEEEEeCCCCC---CCCHHHHHhCCcEEEEecCCC---HHHHHHH
Confidence            88877 9999999999966  78888887  76 999999976533   333332 34899999976432   3578999


Q ss_pred             HHHHHccCCCCCCceeeeeccccHHHHHHHHhcCCc-eeEEEec
Q 018529          310 VDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM  352 (354)
Q Consensus       310 ~~~~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~~  352 (354)
                      ++++.+|++++  .+ ++|+|+++++||+.+.+++. +|+||++
T Consensus       319 ~~l~~~g~l~~--~i-~~~~l~~~~~A~~~~~~~~~~gKvvv~~  359 (359)
T 1h2b_A          319 VTLALQGKVRV--EV-DIHKLDEINDVLERLEKGEVLGRAVLIP  359 (359)
T ss_dssp             HHHHHTTSCCC--CE-EEEEGGGHHHHHHHHHTTCCSSEEEEEC
T ss_pred             HHHHHcCCCcc--eE-EEEeHHHHHHHHHHHHcCCCceEEEeeC
Confidence            99999997764  46 99999999999999998875 7999864

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=100.00  E-value=8.4e-59  Score=421.26  Aligned_cols=333  Identities=26%  Similarity=0.373  Sum_probs=289.4

Q ss_pred             cceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCC---CCCCCcccccceeEEEEEeCCCCCCCC
Q 018529           11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ---TPLFPRIFGHEAAGVVESVGEGVSDLE   87 (354)
Q Consensus        11 ~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~---~~~~p~~~G~e~~G~V~~vG~~~~~~~   87 (354)
                      |||+++.+++++++++++|.|+|++|||+|||.++|||++|++.+.|..+   ...+|.++|||++|+|+++|+++++|+
T Consensus         1 Mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~   80 (343)
T 2dq4_A            1 MRALAKLAPEEGLTLVDRPVPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRPPLVTGHEFSGVVEAVGPGVRRPQ   80 (343)
T ss_dssp             CEEEEECSSSSSCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHTTCHHHHHHCCSSEECCCEEEEEEEEECTTCCSSC
T ss_pred             CeEEEEeCCCCcEEEEeccCCCCCCCEEEEEEEEEeechhhHHHHcCCCCccccCCCCCcCCccceEEEEEECCCCCcCC
Confidence            79999999987799999999999999999999999999999999887543   245799999999999999999999999


Q ss_pred             CCCEEEecccCCCCCCcccccCCCC-CCcc---cccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhh
Q 018529           88 VGDHVLPVFTGECGDCRHCRFSING-EPVN---HFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLN  163 (354)
Q Consensus        88 ~Gd~V~~~~~~~~~~c~~c~~~~~~-~~~~---~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~  163 (354)
                      +||||++.+..+|++|.+|+.+... |...   +....|+|+||+.+|++.++++|+++++++|+++. ++.+||+++.+
T Consensus        81 vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~-~~~ta~~~l~~  159 (343)
T 2dq4_A           81 VGDHVSLESHIVCHACPACRTGNYHVCLNTQILGVDRDGGFAEYVVVPAENAWVNPKDLPFEVAAILE-PFGNAVHTVYA  159 (343)
T ss_dssp             TTCEEEECCEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGEEEECTTSCHHHHTTHH-HHHHHHHHHHS
T ss_pred             CCCEEEECCCCCCCCChhhhCcCcccCCCcceecCCCCCcceeEEEEchHHeEECCCCCCHHHHHhhh-HHHHHHHHHHH
Confidence            9999999999999999999876533 2222   22346999999999999999999999999999874 78899999754


Q ss_pred             hcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEE
Q 018529          164 VAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRS  243 (354)
Q Consensus       164 ~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv  243 (354)
                      .+++ +|++|||+|+|++|++++|+|+.+|+.+|++++++++++++++++ +++++++.+.+  +.+.+++++++++|+|
T Consensus       160 ~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a~~v~~~~~~~--~~~~~~~~~~~g~D~v  235 (343)
T 2dq4_A          160 GSGV-SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-ADRLVNPLEED--LLEVVRRVTGSGVEVL  235 (343)
T ss_dssp             TTCC-TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-CSEEECTTTSC--HHHHHHHHHSSCEEEE
T ss_pred             hCCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-HHhccCcCccC--HHHHHHHhcCCCCCEE
Confidence            7889 999999999999999999999999987799999999999999999 99999987755  8888888883399999


Q ss_pred             EEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecch-h-hhccccEEEEEeccCCCCCCCHHHHHHHHHccCCCCC
Q 018529          244 VECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP-I-NVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELE  321 (354)
Q Consensus       244 ~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~-~-~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  321 (354)
                      ||++|++..++.++++++++ |+++.+|.....  ..+.. . .+.+++++.|++..  ...++++++++++.+|++++.
T Consensus       236 id~~g~~~~~~~~~~~l~~~-G~iv~~g~~~~~--~~~~~~~~~~~~~~~i~g~~~~--~~~~~~~~~~~l~~~g~~~~~  310 (343)
T 2dq4_A          236 LEFSGNEAAIHQGLMALIPG-GEARILGIPSDP--IRFDLAGELVMRGITAFGIAGR--RLWQTWMQGTALVYSGRVDLS  310 (343)
T ss_dssp             EECSCCHHHHHHHHHHEEEE-EEEEECCCCSSC--EEECHHHHTGGGTCEEEECCSC--CTTHHHHHHHHHHHHTSSCCG
T ss_pred             EECCCCHHHHHHHHHHHhcC-CEEEEEecCCCC--ceeCcHHHHHhCceEEEEeecC--CCHHHHHHHHHHHHcCCCChH
Confidence            99999988899999999997 999999986433  33333 2 24589999997643  124579999999999998888


Q ss_pred             CceeeeeccccHHHHHHHHhcCCceeEEEecC
Q 018529          322 KFITHRIPFSEINKAFEYMVKGEGLRCIISME  353 (354)
Q Consensus       322 ~~v~~~~~l~~~~~a~~~~~~~~~~k~vi~~~  353 (354)
                      ++++++|+|+++++||+.+.+++.+|+||+++
T Consensus       311 ~~i~~~~~l~~~~~A~~~~~~~~~gKvv~~~~  342 (343)
T 2dq4_A          311 PLLTHRLPLSRYREAFGLLASGQAVKVILDPK  342 (343)
T ss_dssp             GGEEEEEEGGGHHHHHHHHHHSSCSEEEEETT
T ss_pred             HheeEEecHHHHHHHHHHHhcCCceEEEEeeC
Confidence            88999999999999999998877799999875

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=100.00  E-value=5.2e-59  Score=423.45  Aligned_cols=325  Identities=23%  Similarity=0.368  Sum_probs=279.0

Q ss_pred             chhcceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCC
Q 018529            8 ILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLE   87 (354)
Q Consensus         8 ~~~~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   87 (354)
                      +|+|||+++.+++++++++++|.|+|++|||||||.++|||++|++++.|..+...+|.++|||++|+|+++|+++++|+
T Consensus         2 ~m~mka~~~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~i~G~E~~G~V~~vG~~v~~~~   81 (348)
T 3two_A            2 RVQSKGFAIFSKDEHFKPHDFSRHAVGPRDVLIDILYAGICHSDIHSAYSEWKEGIYPMIPGHEIAGIIKEVGKGVKKFK   81 (348)
T ss_dssp             CEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHTTSSSCCCSSBCCCCCEEEEEEEECTTCCSCC
T ss_pred             ceEEEEEEEccCCCCCeEEEeeCCCCCCCeEEEEEEEeeecccchhhhcCCCCCCCCCeecCcceeEEEEEECCCCCCCC
Confidence            46899999999988899999999999999999999999999999999998776677899999999999999999999999


Q ss_pred             CCCEEEeccc-CCCCCCcccccCCCCCCc---ccccc----------cccceeeEEeeccceEECCCCCCccchhhcccc
Q 018529           88 VGDHVLPVFT-GECGDCRHCRFSINGEPV---NHFLG----------TSTFSEYTVVHSGCVAKINPLAPLDKVCILSCG  153 (354)
Q Consensus        88 ~Gd~V~~~~~-~~~~~c~~c~~~~~~~~~---~~~~~----------~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~  153 (354)
                      +||||++.+. .+|+.|++|+.+....+.   .++..          .|+|+||+.+|++.++++|+++++++||.++++
T Consensus        82 vGdrV~~~~~~~~Cg~C~~C~~g~~~~c~~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~  161 (348)
T 3two_A           82 IGDVVGVGCFVNSCKACKPCKEHQEQFCTKVVFTYDCLDSFHDNEPHMGGYSNNIVVDENYVISVDKNAPLEKVAPLLCA  161 (348)
T ss_dssp             TTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSSEEGGGTTEECCCSSBSEEEEEGGGCEECCTTSCHHHHGGGGTH
T ss_pred             CCCEEEEeCCcCCCCCChhHhCCCcccCcccccccccccccccCCcCCccccceEEechhhEEECCCCCCHHHhhhhhhh
Confidence            9999987654 789999999866543221   12222          299999999999999999999999999999999


Q ss_pred             hhhhhhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHH
Q 018529          154 VSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIA  233 (354)
Q Consensus       154 ~~~a~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~  233 (354)
                      +.|||+++ +..++++|++|||+|+|++|++++|+|+.+|+ +|++++++++++++++++|+++++ . +.+ .    + 
T Consensus       162 ~~ta~~~l-~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~v~-~-~~~-~----~-  231 (348)
T 3two_A          162 GITTYSPL-KFSKVTKGTKVGVAGFGGLGSMAVKYAVAMGA-EVSVFARNEHKKQDALSMGVKHFY-T-DPK-Q----C-  231 (348)
T ss_dssp             HHHHHHHH-HHTTCCTTCEEEEESCSHHHHHHHHHHHHTTC-EEEEECSSSTTHHHHHHTTCSEEE-S-SGG-G----C-
T ss_pred             HHHHHHHH-HhcCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHhcCCCeec-C-CHH-H----H-
Confidence            99999996 45699999999999999999999999999999 999999999999999999999988 2 211 1    1 


Q ss_pred             HHcCCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCC-CCce-eecchhhh-ccccEEEEEeccCCCCCCCHHHHH
Q 018529          234 EMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS-KDAV-FMTKPINV-LNERTLKGTFFGNYKPRTDLPSVV  310 (354)
Q Consensus       234 ~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~-~~~~-~~~~~~~~-~~~~~i~g~~~~~~~~~~~~~~~~  310 (354)
                         ..++|+|||++|++..++.++++++++ |+++.+|... .... ++... .+ .+++++.|++.+..   +++++++
T Consensus       232 ---~~~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~-~~~~~~~~i~g~~~~~~---~~~~~~~  303 (348)
T 3two_A          232 ---KEELDFIISTIPTHYDLKDYLKLLTYN-GDLALVGLPPVEVAPVLSVFD-FIHLGNRKVYGSLIGGI---KETQEMV  303 (348)
T ss_dssp             ---CSCEEEEEECCCSCCCHHHHHTTEEEE-EEEEECCCCCGGGCCEEEHHH-HHHTCSCEEEECCSCCH---HHHHHHH
T ss_pred             ---hcCCCEEEECCCcHHHHHHHHHHHhcC-CEEEEECCCCCCCcccCCHHH-HHhhCCeEEEEEecCCH---HHHHHHH
Confidence               117999999999966999999999997 9999999765 2222 22222 23 68999999875433   5799999


Q ss_pred             HHHHccCCCCCCceeeeeccccHHHHHHHHhcCCc-eeEEEecC
Q 018529          311 DMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISME  353 (354)
Q Consensus       311 ~~~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~~~  353 (354)
                      +++.+|++++.   .++|+|+++++||+.+.+++. +|+||+++
T Consensus       304 ~l~~~g~l~~~---~~~~~l~~~~~A~~~~~~~~~~gKvVi~~~  344 (348)
T 3two_A          304 DFSIKHNIYPE---IDLILGKDIDTAYHNLTHGKAKFRYVIDMK  344 (348)
T ss_dssp             HHHHHTTCCCC---EEEECGGGHHHHHHHHHTTCCCSEEEEEGG
T ss_pred             HHHHhCCCCce---EEEEEHHHHHHHHHHHHcCCCceEEEEecC
Confidence            99999988763   479999999999999998886 79999885

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=100.00  E-value=9e-58  Score=417.31  Aligned_cols=336  Identities=21%  Similarity=0.232  Sum_probs=284.5

Q ss_pred             ccchhcceeeeccCC-CceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCC-CCCCCcccccceeEEEEEeCCCC
Q 018529            6 GLILTCKAAVAWEAG-KPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ-TPLFPRIFGHEAAGVVESVGEGV   83 (354)
Q Consensus         6 ~~~~~~~a~~~~~~~-~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~-~~~~p~~~G~e~~G~V~~vG~~~   83 (354)
                      .+|.+|||+++.+++ +.+++.+.|.|+|++|||||||.++|||++|++++.|..+ ...+|.++|||++|+|+++|+++
T Consensus        23 ~m~~~mkA~~~~~~~~~~l~~~e~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~P~v~GhE~~G~V~~vG~~v  102 (363)
T 3uog_A           23 MMSKWMQEWSTETVAPHDLKLAERPVPEAGEHDIIVRTLAVSLNYRDKLVLETGMGLDLAFPFVPASDMSGVVEAVGKSV  102 (363)
T ss_dssp             CCCSEEEEEEBSCTTTTCCEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHHCTTCCCCSSBCCCCEEEEEEEEECTTC
T ss_pred             cCchhhEEEEEccCCCCCcEEEeeeCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCcCcccceEEEEEEECCCC
Confidence            467889999999774 3499999999999999999999999999999999988665 35689999999999999999999


Q ss_pred             CCCCCCCEEEecccCCCCCCc-ccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhh
Q 018529           84 SDLEVGDHVLPVFTGECGDCR-HCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATL  162 (354)
Q Consensus        84 ~~~~~Gd~V~~~~~~~~~~c~-~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~  162 (354)
                      ++|++||||++.+...|..+. .|..........+....|+|+||+.+|++.++++|+++++++||+++++++|||+++.
T Consensus       103 ~~~~vGDrV~~~~~~~c~~g~~~c~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~  182 (363)
T 3uog_A          103 TRFRPGDRVISTFAPGWLDGLRPGTGRTPAYETLGGAHPGVLSEYVVLPEGWFVAAPKSLDAAEASTLPCAGLTAWFALV  182 (363)
T ss_dssp             CSCCTTCEEEECSSTTCCSSSCCSCSSCCCCCCTTTTSCCCCBSEEEEEGGGEEECCTTSCHHHHHTTTTHHHHHHHHHT
T ss_pred             CCCCCCCEEEEeccccccccccccccccccccccCcCCCCcceeEEEechHHeEECCCCCCHHHHhhcccHHHHHHHHHH
Confidence            999999999988766543322 1211000000023345699999999999999999999999999999999999999987


Q ss_pred             hhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC-Ccc
Q 018529          163 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVD  241 (354)
Q Consensus       163 ~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~~d  241 (354)
                      +.+++++|++|||+|+|++|++++|+|+.+|+ +|++++++++++++++++|++.+++..+.+  +.+.+++++++ ++|
T Consensus       183 ~~~~~~~g~~VlV~G~G~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~--~~~~v~~~~~g~g~D  259 (363)
T 3uog_A          183 EKGHLRAGDRVVVQGTGGVALFGLQIAKATGA-EVIVTSSSREKLDRAFALGADHGINRLEED--WVERVYALTGDRGAD  259 (363)
T ss_dssp             TTTCCCTTCEEEEESSBHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTCSEEEETTTSC--HHHHHHHHHTTCCEE
T ss_pred             HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEecCchhHHHHHHcCCCEEEcCCccc--HHHHHHHHhCCCCce
Confidence            88999999999999999999999999999999 999999999999999999999999844344  88999999988 999


Q ss_pred             EEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhh-hccccEEEEEeccCCCCCCCHHHHHHHHHccCCCC
Q 018529          242 RSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLEL  320 (354)
Q Consensus       242 vv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~  320 (354)
                      +|||++|. +.++.++++++++ |+++.+|..... ...+.... +.+++++.|++...   +++++++++++.++++  
T Consensus       260 ~vid~~g~-~~~~~~~~~l~~~-G~iv~~G~~~~~-~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~l~~~g~l--  331 (363)
T 3uog_A          260 HILEIAGG-AGLGQSLKAVAPD-GRISVIGVLEGF-EVSGPVGPLLLKSPVVQGISVGH---RRALEDLVGAVDRLGL--  331 (363)
T ss_dssp             EEEEETTS-SCHHHHHHHEEEE-EEEEEECCCSSC-EECCBTTHHHHTCCEEEECCCCC---HHHHHHHHHHHHHHTC--
T ss_pred             EEEECCCh-HHHHHHHHHhhcC-CEEEEEecCCCc-ccCcCHHHHHhCCcEEEEEecCC---HHHHHHHHHHHHcCCC--
Confidence            99999996 7899999999997 999999987632 23333333 45899999987543   3579999999999965  


Q ss_pred             CCceeeeeccccHHHHHHHHhcCCceeEEEec
Q 018529          321 EKFITHRIPFSEINKAFEYMVKGEGLRCIISM  352 (354)
Q Consensus       321 ~~~v~~~~~l~~~~~a~~~~~~~~~~k~vi~~  352 (354)
                      .+.++++|+|+++++||+.+.+++.+|+||++
T Consensus       332 ~~~i~~~~~l~~~~~A~~~~~~~~~gKvvi~~  363 (363)
T 3uog_A          332 KPVIDMRYKFTEVPEALAHLDRGPFGKVVIEF  363 (363)
T ss_dssp             CCCEEEEEEGGGHHHHHHTGGGCCSBEEEEEC
T ss_pred             ccceeeEEcHHHHHHHHHHHHcCCCccEEEeC
Confidence            45688999999999999999888877999875

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=100.00  E-value=1.2e-58  Score=422.89  Aligned_cols=331  Identities=21%  Similarity=0.299  Sum_probs=282.2

Q ss_pred             cchhcceeeeccCCCceEEEE--eecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCC
Q 018529            7 LILTCKAAVAWEAGKPLIIQD--VEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVS   84 (354)
Q Consensus         7 ~~~~~~a~~~~~~~~~l~~~~--~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   84 (354)
                      +|++|||+++.+++.++++.+  +|.|+|++|||||||.++|||++|++.+.|..+...+|.++|||++|+|+++|++++
T Consensus         3 ~p~~mka~~~~~~~~~l~~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~v~GhE~~G~V~~vG~~v~   82 (360)
T 1piw_A            3 YPEKFEGIAIQSHEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGNMKMPLVVGHEIVGKVVKLGPKSN   82 (360)
T ss_dssp             TTTCEEEEEECCSSSTTSCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTTTSCCCSSEECCCCEEEEEEEECTTCC
T ss_pred             CChheEEEEEecCCCCeeEEeccccCCCCCCCeEEEEEEEeccchhhHHHhcCCCCCCCCCcccCcCceEEEEEeCCCCC
Confidence            588999999999986789999  999999999999999999999999999988655556799999999999999999999


Q ss_pred             -CCCCCCEEEe-cccCCCCCCcccccCCCCCC-cc----------cccccccceeeEEeeccceEECCCCCCccchhhcc
Q 018529           85 -DLEVGDHVLP-VFTGECGDCRHCRFSINGEP-VN----------HFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILS  151 (354)
Q Consensus        85 -~~~~Gd~V~~-~~~~~~~~c~~c~~~~~~~~-~~----------~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~  151 (354)
                       +|++||||++ .+..+|++|.+|+.+....+ ..          +....|+|+||+.+|++.++++|+++++++||+++
T Consensus        83 ~~~~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~  162 (360)
T 1piw_A           83 SGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPIPENIPSHLAAPLL  162 (360)
T ss_dssp             SSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSCBCTTSCBCCCSSBSEEEEEGGGEEECCTTSCHHHHGGGG
T ss_pred             CCCCCCCEEEEecCCCCCCCChhhcCCCcccCcchhhccccccCCCccCCCcceeEEEEchhheEECCCCCCHHHhhhhh
Confidence             9999999954 44578999999987654322 21          22356999999999999999999999999999999


Q ss_pred             cchhhhhhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCC-ChhHHH
Q 018529          152 CGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEH-DRPIQE  230 (354)
Q Consensus       152 ~~~~~a~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~-~~~~~~  230 (354)
                      +++.|||+++.+ +++++|++|||+|+|++|++++|+|+.+|+ +|++++++++++++++++|+++++++.+. +  +.+
T Consensus       163 ~~~~ta~~~l~~-~~~~~g~~VlV~GaG~vG~~~~qlak~~Ga-~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~--~~~  238 (360)
T 1piw_A          163 CGGLTVYSPLVR-NGCGPGKKVGIVGLGGIGSMGTLISKAMGA-ETYVISRSSRKREDAMKMGADHYIATLEEGD--WGE  238 (360)
T ss_dssp             THHHHHHHHHHH-TTCSTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHHTCSEEEEGGGTSC--HHH
T ss_pred             hhHHHHHHHHHH-cCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHcCCCEEEcCcCchH--HHH
Confidence            999999999754 899999999999999999999999999999 79999999999999999999999988765 4  544


Q ss_pred             HHHHHcCCCccEEEEcccC--hHhHHHHHHHhhCCCceEEEEcCCCCCc-eeecchhhhccccEEEEEeccCCCCCCCHH
Q 018529          231 VIAEMTNGGVDRSVECTGN--IDNMISAFECVHDGWGVAVLVGVPSKDA-VFMTKPINVLNERTLKGTFFGNYKPRTDLP  307 (354)
Q Consensus       231 ~i~~~~~~~~dvv~d~~g~--~~~~~~~~~~l~~~~g~~v~~g~~~~~~-~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~  307 (354)
                      .+.    +++|+|||++|+  +..++.++++++++ |+++.+|.... . .++.. ..+.+++++.|++...   .++++
T Consensus       239 ~~~----~~~D~vid~~g~~~~~~~~~~~~~l~~~-G~iv~~g~~~~-~~~~~~~-~~~~~~~~i~g~~~~~---~~~~~  308 (360)
T 1piw_A          239 KYF----DTFDLIVVCASSLTDIDFNIMPKAMKVG-GRIVSISIPEQ-HEMLSLK-PYGLKAVSISYSALGS---IKELN  308 (360)
T ss_dssp             HSC----SCEEEEEECCSCSTTCCTTTGGGGEEEE-EEEEECCCCCS-SCCEEEC-GGGCBSCEEEECCCCC---HHHHH
T ss_pred             Hhh----cCCCEEEECCCCCcHHHHHHHHHHhcCC-CEEEEecCCCC-ccccCHH-HHHhCCeEEEEEecCC---HHHHH
Confidence            433    589999999998  77888999999997 99999998653 2 22222 2244899999876432   35689


Q ss_pred             HHHHHHHccCCCCCCceeeeecccc--HHHHHHHHhcCCc-eeEEEecCC
Q 018529          308 SVVDMYMNKQLELEKFITHRIPFSE--INKAFEYMVKGEG-LRCIISMED  354 (354)
Q Consensus       308 ~~~~~~~~~~~~~~~~v~~~~~l~~--~~~a~~~~~~~~~-~k~vi~~~d  354 (354)
                      ++++++.++++++.  + ++|+|++  +++||+.+.+++. +|+||+++|
T Consensus       309 ~~~~l~~~g~l~~~--i-~~~~l~~~~~~~A~~~~~~~~~~gKvvi~~~~  355 (360)
T 1piw_A          309 QLLKLVSEKDIKIW--V-ETLPVGEAGVHEAFERMEKGDVRYRFTLVGYD  355 (360)
T ss_dssp             HHHHHHHHTTCCCC--E-EEEESSHHHHHHHHHHHHHTCCSSEEEEECCH
T ss_pred             HHHHHHHhCCCcce--E-EEEeccHhHHHHHHHHHHCCCCceEEEEecCc
Confidence            99999999977654  6 8999999  9999999988774 799998764

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=100.00  E-value=2.9e-57  Score=410.35  Aligned_cols=330  Identities=29%  Similarity=0.461  Sum_probs=284.5

Q ss_pred             cceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCC-CCCCcccccceeEEEEEeCCCCCCCCCC
Q 018529           11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLEVG   89 (354)
Q Consensus        11 ~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~~~~~~~G   89 (354)
                      |||+++++++.++++++.|.|+|++|||+|||.++|||++|++.+.|..+. ..+|.++|||++|+|+++|+++++|++|
T Consensus         1 Mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~GhE~~G~V~~vG~~v~~~~vG   80 (339)
T 1rjw_A            1 MKAAVVEQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGIVEEVGPGVTHLKVG   80 (339)
T ss_dssp             CEEEEBSSTTSCCEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSCEEEEEEEECTTCCSCCTT
T ss_pred             CeEEEEcCCCCCcEEEEeeCCCCCCCEEEEEEEEEeEchhhHHHhcCCCCcCCCCCeeccccceEEEEEECCCCCcCCCC
Confidence            799999999866999999999999999999999999999999998886542 3579999999999999999999999999


Q ss_pred             CEEEecccC-CCCCCcccccCCCC-CCc---ccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhh
Q 018529           90 DHVLPVFTG-ECGDCRHCRFSING-EPV---NHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNV  164 (354)
Q Consensus        90 d~V~~~~~~-~~~~c~~c~~~~~~-~~~---~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~  164 (354)
                      |||++.+.. .|+.|.+|+.+... |..   .+....|+|+||+.+|++.++++|+++++++||++++++.|||+++.+ 
T Consensus        81 drV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~-  159 (339)
T 1rjw_A           81 DRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVDGGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKALKV-  159 (339)
T ss_dssp             CEEEECSEEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGCEECCTTSCHHHHGGGGTHHHHHHHHHHH-
T ss_pred             CEEEEecCCCCCCCCchhhCcCcccCCCcceeecCCCCcceeeEEechHHEEECCCCCCHHHhhhhhhhHHHHHHHHHh-
Confidence            999987654 59999999866532 222   223346999999999999999999999999999999999999999754 


Q ss_pred             cCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEE
Q 018529          165 AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSV  244 (354)
Q Consensus       165 ~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~  244 (354)
                      .++++|++|||+|+|++|++++|+|+.+|+ +|++++++++++++++++|++.++++.+.+  +.+.+++.+ +++|+||
T Consensus       160 ~~~~~g~~VlV~GaG~vG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~~~d~~~~~--~~~~~~~~~-~~~d~vi  235 (339)
T 1rjw_A          160 TGAKPGEWVAIYGIGGLGHVAVQYAKAMGL-NVVAVDIGDEKLELAKELGADLVVNPLKED--AAKFMKEKV-GGVHAAV  235 (339)
T ss_dssp             HTCCTTCEEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCSEEECTTTSC--HHHHHHHHH-SSEEEEE
T ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHCCCCEEecCCCcc--HHHHHHHHh-CCCCEEE
Confidence            589999999999998899999999999999 999999999999999999999999887654  778888877 6899999


Q ss_pred             EcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhh-hccccEEEEEeccCCCCCCCHHHHHHHHHccCCCCCCc
Q 018529          245 ECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKF  323 (354)
Q Consensus       245 d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  323 (354)
                      |++|.+..++.++++++++ |+++.+|.....  ..+.... +.+++++.|++...   .++++++++++.++++++.  
T Consensus       236 d~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~l~~~g~l~~~--  307 (339)
T 1rjw_A          236 VTAVSKPAFQSAYNSIRRG-GACVLVGLPPEE--MPIPIFDTVLNGIKIIGSIVGT---RKDLQEALQFAAEGKVKTI--  307 (339)
T ss_dssp             ESSCCHHHHHHHHHHEEEE-EEEEECCCCSSE--EEEEHHHHHHTTCEEEECCSCC---HHHHHHHHHHHHTTSCCCC--
T ss_pred             ECCCCHHHHHHHHHHhhcC-CEEEEecccCCC--CccCHHHHHhCCcEEEEeccCC---HHHHHHHHHHHHcCCCCcc--
Confidence            9999988999999999997 999999986532  3333333 34899999876432   2578999999999988764  


Q ss_pred             eeeeeccccHHHHHHHHhcCC-ceeEEEecCC
Q 018529          324 ITHRIPFSEINKAFEYMVKGE-GLRCIISMED  354 (354)
Q Consensus       324 v~~~~~l~~~~~a~~~~~~~~-~~k~vi~~~d  354 (354)
                       +++|+|+++++||+.+.+++ .+|+||+++|
T Consensus       308 -~~~~~l~~~~~A~~~~~~~~~~gKvvi~~~~  338 (339)
T 1rjw_A          308 -IEVQPLEKINEVFDRMLKGQINGRVVLTLED  338 (339)
T ss_dssp             -EEEEEGGGHHHHHHHHHTTCCSSEEEEECCC
T ss_pred             -EEEEcHHHHHHHHHHHHcCCCceEEEEecCC
Confidence             57899999999999998876 4799998865

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=100.00  E-value=3e-57  Score=412.30  Aligned_cols=331  Identities=23%  Similarity=0.325  Sum_probs=285.2

Q ss_pred             cceeeeccC-CCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 018529           11 CKAAVAWEA-GKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG   89 (354)
Q Consensus        11 ~~a~~~~~~-~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~G   89 (354)
                      |||+++... +..++++++|+|+|+||||||||.|+|||++|++++.|..+ ..+|.++|||++|+|+++|+++++|++|
T Consensus         1 MKA~v~~~~~~~~~~l~e~~~P~~~p~eVLVkv~a~gic~~D~~~~~G~~~-~~~p~i~GhE~aG~V~~vG~~V~~~~~G   79 (348)
T 4eez_A            1 MKAAVVRHNPDGYADLVEKELRAIKPNEALLDMEYCGVCHTDLHVAAGDFG-NKAGTVLGHEGIGIVKEIGADVSSLQVG   79 (348)
T ss_dssp             CEEEEECSSCCSSEEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHTTTTC-CCTTCBCCSEEEEEEEEECTTCCSCCTT
T ss_pred             CeEEEEEcCCCCcEEEEEeECCCCCCCEEEEEEEEEEECHHHHHHhcCCCC-CCCCcccceeEEEEEEEECceeeecccC
Confidence            899988654 34599999999999999999999999999999999988655 4679999999999999999999999999


Q ss_pred             CEEEecccC-CCCCCcccccCCCCC----CcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhh
Q 018529           90 DHVLPVFTG-ECGDCRHCRFSINGE----PVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNV  164 (354)
Q Consensus        90 d~V~~~~~~-~~~~c~~c~~~~~~~----~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~  164 (354)
                      |||++.+.. .|+.|.+|..+....    ...+....|+|+||+.+|++.++++|+++++++|+++++++.|||+++ +.
T Consensus        80 drV~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~~ae~~~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l-~~  158 (348)
T 4eez_A           80 DRVSVAWFFEGCGHCEYCVSGNETFCREVKNAGYSVDGGMAEEAIVVADYAVKVPDGLDPIEASSITCAGVTTYKAI-KV  158 (348)
T ss_dssp             CEEEEESEEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGSCBCCTTSCHHHHHHHHHHHHHHHHHH-HH
T ss_pred             CeEeecccccccCccccccCCcccccccccccccccCCcceeeccccccceeecCCCCCHHHHhhcccceeeEEeee-cc
Confidence            999877655 467888886554322    223344569999999999999999999999999999999999999985 67


Q ss_pred             cCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC-CccEE
Q 018529          165 AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRS  243 (354)
Q Consensus       165 ~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~~dvv  243 (354)
                      +++++|++|||+|+|++|.+++|+|+.++..+|++++++++|+++++++|++.++++.+.+  +.+++++++++ ++|++
T Consensus       159 ~~~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~Ga~~~i~~~~~~--~~~~v~~~t~g~g~d~~  236 (348)
T 4eez_A          159 SGVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADVTINSGDVN--PVDEIKKITGGLGVQSA  236 (348)
T ss_dssp             HTCCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHTTCSEEEEC-CCC--HHHHHHHHTTSSCEEEE
T ss_pred             cCCCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhcCCeEEEeCCCCC--HHHHhhhhcCCCCceEE
Confidence            8899999999999999999999999987555999999999999999999999999998876  88999999998 99999


Q ss_pred             EEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhhccccEEEEEeccCCCCCCCHHHHHHHHHccCCCCCCc
Q 018529          244 VECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKF  323 (354)
Q Consensus       244 ~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  323 (354)
                      ++++++...+..++++++++ |+++.+|........+.. ..+.+++++.|++.+.   +++++++++++.+|++++   
T Consensus       237 ~~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~-~~~~~~~~i~gs~~~~---~~~~~~~~~l~~~g~i~p---  308 (348)
T 4eez_A          237 IVCAVARIAFEQAVASLKPM-GKMVAVAVPNTEMTLSVP-TVVFDGVEVAGSLVGT---RLDLAEAFQFGAEGKVKP---  308 (348)
T ss_dssp             EECCSCHHHHHHHHHTEEEE-EEEEECCCCSCEEEECHH-HHHHSCCEEEECCSCC---HHHHHHHHHHHHTTSCCC---
T ss_pred             EEeccCcchhheeheeecCC-ceEEEEeccCCCCccCHH-HHHhCCeEEEEEecCC---HHHHHHHHHHHHcCCCEE---
Confidence            99999989999999999997 999999976543333322 2245899999987543   357999999999998764   


Q ss_pred             eeeeeccccHHHHHHHHhcCCc-eeEEEecC
Q 018529          324 ITHRIPFSEINKAFEYMVKGEG-LRCIISME  353 (354)
Q Consensus       324 v~~~~~l~~~~~a~~~~~~~~~-~k~vi~~~  353 (354)
                      ++++|||+|+++||+.+++++. +|+||+|+
T Consensus       309 ~~~~~~l~~~~~A~~~l~~g~~~GKvVl~~s  339 (348)
T 4eez_A          309 IVATRKLEEINDIIDEMKAGKIEGRMVIDFT  339 (348)
T ss_dssp             CEEEECGGGHHHHHHHHHTTCCSSEEEEECC
T ss_pred             EEEEEeHHHHHHHHHHHHCCCCccEEEEEcc
Confidence            3588999999999999999885 69999986

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.2e-57  Score=418.82  Aligned_cols=337  Identities=27%  Similarity=0.382  Sum_probs=286.1

Q ss_pred             cchhcceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCC--
Q 018529            7 LILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVS--   84 (354)
Q Consensus         7 ~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~--   84 (354)
                      +-.+|||+++.++++.++++++|.|+|++|||||||.++|||++|++++.|..+...+|.++|||++|+|+++| +++  
T Consensus        14 ~~~~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~P~v~GhE~~G~V~~vG-~V~~~   92 (380)
T 1vj0_A           14 MGLKAHAMVLEKFNQPLVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPRVPLPIILGHEGAGRVVEVN-GEKRD   92 (380)
T ss_dssp             CCEEEEEEEBCSTTSCCEEEEEEECCCCTTCEEEEEEEEEECHHHHHHHTTCCTTCCSSBCCCCEEEEEEEEES-SCCBC
T ss_pred             hhhheEEEEEecCCCCeEEEEccCCCCCCCEEEEEEeEEeecccchHHhcCCCCCCCCCcccCcCcEEEEEEeC-Ccccc
Confidence            34579999999998559999999999999999999999999999999998865444679999999999999999 999  


Q ss_pred             ----CCCCCCEEEecccCCCCCCcccc-cCCCC-CCcccc-----------cccccceeeEEe-eccceEECCCCCCcc-
Q 018529           85 ----DLEVGDHVLPVFTGECGDCRHCR-FSING-EPVNHF-----------LGTSTFSEYTVV-HSGCVAKINPLAPLD-  145 (354)
Q Consensus        85 ----~~~~Gd~V~~~~~~~~~~c~~c~-~~~~~-~~~~~~-----------~~~g~~a~~~~v-~~~~~~~~P~~~~~~-  145 (354)
                          +|++||||++.+..+|+.|.+|+ .+... |.....           ...|+|+||+.+ |++.++++|++++++ 
T Consensus        93 ~~~~~~~vGdrV~~~~~~~cg~C~~C~~~g~~~~C~~~~~~g~~~~~~~~~~~~G~~aey~~v~~~~~~~~iP~~l~~~~  172 (380)
T 1vj0_A           93 LNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPHLRGCYSSHIVLDPETDVLKVSEKDDLDV  172 (380)
T ss_dssp             TTSCBCCTTCEEEECSEECCSSSHHHHTSCCGGGCTTCEETTTTCCSSSTTCCCSSSBSEEEECTTCCEEEECTTSCHHH
T ss_pred             ccCCCCCCCCEEEEcccCCCCCCHHHhcCCCcccCCCcceeccccccCCCCCCCccccceEEEcccceEEECCCCCChHH
Confidence                99999999999999999999998 65432 222211           235999999999 999999999999999 


Q ss_pred             chhhcccchhhhhhhhhhhcC-CCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCC
Q 018529          146 KVCILSCGVSTGLGATLNVAK-PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEH  224 (354)
Q Consensus       146 ~aa~l~~~~~~a~~~l~~~~~-~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~  224 (354)
                      +|++++ +++|||+++ +.++ +++|++|||+|+|++|++++|+|+.+|+.+|++++++++++++++++|+++++++...
T Consensus       173 ~Aa~~~-~~~ta~~al-~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~  250 (380)
T 1vj0_A          173 LAMAMC-SGATAYHAF-DEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNRRET  250 (380)
T ss_dssp             HHHHTT-HHHHHHHHH-HTCSSCCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCSEEEETTTS
T ss_pred             hHhhhc-HHHHHHHHH-HhcCCCCCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHcCCcEEEecccc
Confidence            666666 999999997 6678 9999999999999999999999999994499999999999999999999999988621


Q ss_pred             -ChhHHHHHHHHcCC-CccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCC-CCceeecchhh--hccccEEEEEeccC
Q 018529          225 -DRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS-KDAVFMTKPIN--VLNERTLKGTFFGN  299 (354)
Q Consensus       225 -~~~~~~~i~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~-~~~~~~~~~~~--~~~~~~i~g~~~~~  299 (354)
                       +.++.+.+++++++ ++|+|||++|++..++.++++++++ |+++.+|... .. ...+....  +.+++++.|++...
T Consensus       251 ~~~~~~~~v~~~~~g~g~Dvvid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~~-~~~~~~~~~~~~~~~~i~g~~~~~  328 (380)
T 1vj0_A          251 SVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRG-GFYSVAGVAVPQD-PVPFKVYEWLVLKNATFKGIWVSD  328 (380)
T ss_dssp             CHHHHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEE-EEEEECCCCSCCC-CEEECHHHHTTTTTCEEEECCCCC
T ss_pred             CcchHHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCCCCC-CeeEchHHHHHhCCeEEEEeecCC
Confidence             23488889999887 9999999999877899999999997 9999999865 31 22333333  45899999976542


Q ss_pred             CCCCCCHHHHHHHHHc--cCCCCCCceeeeeccccHHHHHHHHhcCCceeEEEecC
Q 018529          300 YKPRTDLPSVVDMYMN--KQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISME  353 (354)
Q Consensus       300 ~~~~~~~~~~~~~~~~--~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~~k~vi~~~  353 (354)
                         .++++++++++.+  |++  .+.++++|+|+++++||+.+.+++..|+||+++
T Consensus       329 ---~~~~~~~~~l~~~~~g~l--~~~i~~~~~l~~~~~A~~~~~~~~~~Kvvl~~~  379 (380)
T 1vj0_A          329 ---TSHFVKTVSITSRNYQLL--SKLITHRLPLKEANKALELMESREALKVILYPE  379 (380)
T ss_dssp             ---HHHHHHHHHHHHTCHHHH--GGGCCEEEEGGGHHHHHHHHHHTSCSCEEEECC
T ss_pred             ---HHHHHHHHHHHHhhcCCe--eeEEEEEEeHHHHHHHHHHHhcCCCceEEEEeC
Confidence               3578999999999  876  556889999999999999998776449998864

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.1e-56  Score=406.16  Aligned_cols=336  Identities=25%  Similarity=0.409  Sum_probs=286.8

Q ss_pred             cchhcceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCC-CCCCcccccceeEEEEEeCCCCCC
Q 018529            7 LILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSD   85 (354)
Q Consensus         7 ~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~~~~   85 (354)
                      +|.+|||+++.+++.+++++++|.|+|+++||+|||.++|||++|++++.|..+. ..+|.++|||++|+|+++|+++++
T Consensus         2 ~p~~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~vG~~v~~   81 (347)
T 2hcy_A            2 IPETQKGVIFYESHGKLEYKDIPVPKPKANELLINVKYSGVCHTDLHAWHGDWPLPVKLPLVGGHEGAGVVVGMGENVKG   81 (347)
T ss_dssp             CCSEEEEEEESSTTCCCEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSEECCCEEEEEEEEECTTCCS
T ss_pred             CCcccEEEEEeCCCCCCEEEEeeCCCCCCCEEEEEEEEEEechhHHHHhcCCCCCCCCCCcccCccceEEEEEECCCCCC
Confidence            6789999999999866999999999999999999999999999999998886542 457999999999999999999999


Q ss_pred             CCCCCEEEecccC-CCCCCcccccCCCC-CCcc---cccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhh
Q 018529           86 LEVGDHVLPVFTG-ECGDCRHCRFSING-EPVN---HFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGA  160 (354)
Q Consensus        86 ~~~Gd~V~~~~~~-~~~~c~~c~~~~~~-~~~~---~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~  160 (354)
                      |++||||++.+.. .|+.|++|+.+... |...   +....|+|+||+.+|++.++++|+++++++||++++++.|||++
T Consensus        82 ~~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~  161 (347)
T 2hcy_A           82 WKIGDYAGIKWLNGSCMACEYCELGNESNCPHADLSGYTHDGSFQQYATADAVQAAHIPQGTDLAQVAPILCAGITVYKA  161 (347)
T ss_dssp             CCTTCEEEECSEEECCSSSTTTTTTCGGGCTTCEEBTTTBCCSSBSEEEEETTTSEEECTTCCHHHHGGGGTHHHHHHHH
T ss_pred             CcCCCEEEEecCCCCCCCChhhhCCCcccCccccccccCCCCcceeEEEeccccEEECCCCCCHHHHHHHhhhHHHHHHH
Confidence            9999999987654 59999999876532 2222   23346999999999999999999999999999999999999999


Q ss_pred             hhhhcCCCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCC
Q 018529          161 TLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGG  239 (354)
Q Consensus       161 l~~~~~~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~  239 (354)
                      +. ..++++|++|||+|+ |++|++++|+|+..|+ +|+++++++++.+.++++|++.++++.+.. ++.+.+++.+.++
T Consensus       162 l~-~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga-~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~-~~~~~~~~~~~~~  238 (347)
T 2hcy_A          162 LK-SANLMAGHWVAISGAAGGLGSLAVQYAKAMGY-RVLGIDGGEGKEELFRSIGGEVFIDFTKEK-DIVGAVLKATDGG  238 (347)
T ss_dssp             HH-TTTCCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECSTTHHHHHHHTTCCEEEETTTCS-CHHHHHHHHHTSC
T ss_pred             HH-hcCCCCCCEEEEECCCchHHHHHHHHHHHCCC-cEEEEcCCHHHHHHHHHcCCceEEecCccH-hHHHHHHHHhCCC
Confidence            64 458999999999998 9999999999999999 999999999999999999999888876322 3778888877668


Q ss_pred             ccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhh-hccccEEEEEeccCCCCCCCHHHHHHHHHccCC
Q 018529          240 VDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQL  318 (354)
Q Consensus       240 ~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~  318 (354)
                      +|++||++|....++.++++++++ |+++.+|.... ....+.... +.+++++.|++...   .++++++++++.++++
T Consensus       239 ~D~vi~~~g~~~~~~~~~~~l~~~-G~iv~~g~~~~-~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~l~~~g~l  313 (347)
T 2hcy_A          239 AHGVINVSVSEAAIEASTRYVRAN-GTTVLVGMPAG-AKCCSDVFNQVVKSISIVGSYVGN---RADTREALDFFARGLV  313 (347)
T ss_dssp             EEEEEECSSCHHHHHHHTTSEEEE-EEEEECCCCTT-CEEEEEHHHHHHTTCEEEECCCCC---HHHHHHHHHHHHTTSC
T ss_pred             CCEEEECCCcHHHHHHHHHHHhcC-CEEEEEeCCCC-CCCCCCHHHHhhCCcEEEEccCCC---HHHHHHHHHHHHhCCC
Confidence            999999999888899999999997 99999998653 223333333 34899999976432   2578999999999987


Q ss_pred             CCCCceeeeeccccHHHHHHHHhcCC-ceeEEEecC
Q 018529          319 ELEKFITHRIPFSEINKAFEYMVKGE-GLRCIISME  353 (354)
Q Consensus       319 ~~~~~v~~~~~l~~~~~a~~~~~~~~-~~k~vi~~~  353 (354)
                      ++.   +++|+|+++++||+.+.+++ .+|+||+++
T Consensus       314 ~~~---~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~  346 (347)
T 2hcy_A          314 KSP---IKVVGLSTLPEIYEKMEKGQIVGRYVVDTS  346 (347)
T ss_dssp             CCC---EEEEEGGGHHHHHHHHHTTCCSSEEEEESC
T ss_pred             ccc---eEEEcHHHHHHHHHHHHcCCcceeEEEecC
Confidence            764   57999999999999998876 479999875

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=100.00  E-value=1.1e-56  Score=409.17  Aligned_cols=332  Identities=23%  Similarity=0.332  Sum_probs=279.7

Q ss_pred             cchhcceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCC
Q 018529            7 LILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDL   86 (354)
Q Consensus         7 ~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~   86 (354)
                      .+|+|+++.++++++++++.++|.|+|++|||+|||.++|||++|++.+.|..+...+|.++|||++|+|+++|+++++|
T Consensus         6 ~~m~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G~V~~vG~~v~~~   85 (357)
T 2cf5_A            6 AERKTTGWAARDPSGILSPYTYTLRETGPEDVNIRIICCGICHTDLHQTKNDLGMSNYPMVPGHEVVGEVVEVGSDVSKF   85 (357)
T ss_dssp             CCCEEEEEEECSTTCCEEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHTCTTTCCCSSBCCCCEEEEEEEEECSSCCSC
T ss_pred             CcceeEEEEEccCCCCcEEEEecCCCCCCCEEEEEEEEEeecchhhhhhcCCCCCCCCCeecCcceeEEEEEECCCCCCC
Confidence            57899999998887779999999999999999999999999999999998765545679999999999999999999999


Q ss_pred             CCCCEEEeccc-CCCCCCcccccCCCCCCc-c----------cccccccceeeEEeeccceEECCCCCCccchhhcccch
Q 018529           87 EVGDHVLPVFT-GECGDCRHCRFSINGEPV-N----------HFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGV  154 (354)
Q Consensus        87 ~~Gd~V~~~~~-~~~~~c~~c~~~~~~~~~-~----------~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~  154 (354)
                      ++||||++.+. .+|+.|.+|+.+....+. .          +....|+|+||+++|++.++++|+++++++||++++++
T Consensus        86 ~vGdrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~ls~~~aa~l~~~~  165 (357)
T 2cf5_A           86 TVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWSYNDVYINGQPTQGGFAKATVVHQKFVVKIPEGMAVEQAAPLLCAG  165 (357)
T ss_dssp             CTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCTTSCBCCCSSBSCEEEEGGGEEECCSSCCHHHHTGGGTHH
T ss_pred             CCCCEEEEcCCCCCCCCChHHhCcCcccCCCccccccccccCCCCCCCccccEEEechhhEEECcCCCCHHHhhhhhhhH
Confidence            99999987554 579999999765432221 1          11246999999999999999999999999999999999


Q ss_pred             hhhhhhhhhhcCCC-CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH-hcCCceEEcCCCCChhHHHHH
Q 018529          155 STGLGATLNVAKPE-RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTDFVNTSEHDRPIQEVI  232 (354)
Q Consensus       155 ~~a~~~l~~~~~~~-~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~-~lg~~~v~~~~~~~~~~~~~i  232 (354)
                      .|||+++ ...+++ +|++|||+|+|++|++++|+|+.+|+ +|++++++++++++++ ++|+++++++.+.     +.+
T Consensus       166 ~ta~~~l-~~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga-~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~-----~~~  238 (357)
T 2cf5_A          166 VTVYSPL-SHFGLKQPGLRGGILGLGGVGHMGVKIAKAMGH-HVTVISSSNKKREEALQDLGADDYVIGSDQ-----AKM  238 (357)
T ss_dssp             HHHHHHH-HHTSTTSTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSTTHHHHHHTTSCCSCEEETTCH-----HHH
T ss_pred             HHHHHHH-HhcCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHcCCceeeccccH-----HHH
Confidence            9999996 457888 99999999999999999999999999 8999999999999988 8999999987652     345


Q ss_pred             HHHcCCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhhccccEEEEEeccCCCCCCCHHHHHHH
Q 018529          233 AEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDM  312 (354)
Q Consensus       233 ~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~  312 (354)
                      ++.+ +++|+|||++|.+..++.++++++++ |+++.+|....... .+....+.+++++.|++...   .+++++++++
T Consensus       239 ~~~~-~g~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~-~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~l  312 (357)
T 2cf5_A          239 SELA-DSLDYVIDTVPVHHALEPYLSLLKLD-GKLILMGVINNPLQ-FLTPLLMLGRKVITGSFIGS---MKETEEMLEF  312 (357)
T ss_dssp             HHST-TTEEEEEECCCSCCCSHHHHTTEEEE-EEEEECSCCSSCCC-CCHHHHHHHTCEEEECCSCC---HHHHHHHHHH
T ss_pred             HHhc-CCCCEEEECCCChHHHHHHHHHhccC-CEEEEeCCCCCCcc-ccCHHHHhCccEEEEEccCC---HHHHHHHHHH
Confidence            5554 37999999999866889999999997 99999997653221 12222345899999976532   2568999999


Q ss_pred             HHccCCCCCCceeeeeccccHHHHHHHHhcCCc-eeEEEecCC
Q 018529          313 YMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISMED  354 (354)
Q Consensus       313 ~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~~~d  354 (354)
                      +.++++++.  + ++|||+++++||+.+.+++. +|+||++++
T Consensus       313 ~~~g~l~~~--~-~~~~l~~~~~A~~~~~~~~~~gKvvi~~~~  352 (357)
T 2cf5_A          313 CKEKGLSSI--I-EVVKMDYVNTAFERLEKNDVRYRFVVDVEG  352 (357)
T ss_dssp             HHHTTCCCC--E-EEEEGGGHHHHHHHHHTTCSSSEEEEETTS
T ss_pred             HHcCCCCCc--e-EEEeHHHHHHHHHHHHCCCCceEEEEeCCc
Confidence            999988754  4 79999999999999988775 699998753

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=100.00  E-value=3.4e-56  Score=404.16  Aligned_cols=331  Identities=21%  Similarity=0.358  Sum_probs=286.3

Q ss_pred             cceeeeccCCCc--eEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCC-CCCCcccccceeEEEEEeCCCCCCCC
Q 018529           11 CKAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLE   87 (354)
Q Consensus        11 ~~a~~~~~~~~~--l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~~~~~~   87 (354)
                      |||+++.+++.+  +++++.|.|+|++|||||||.++|||++|++++.|..+. ..+|.++|||++|+|+++|+++++|+
T Consensus         1 Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~   80 (343)
T 2eih_A            1 MRAVVMRARGGPEVLEVADLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVASPKLPLPHVLGADGSGVVDAVGPGVEGFA   80 (343)
T ss_dssp             CEEEEECSSSSGGGEEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSSTTCCSSEECCSEEEEEEEEECSSCCSCC
T ss_pred             CeEEEEecCCCCceEEEEecCCCCCCCCEEEEEEEEEEeCHHHHHHhcCCCCCCCCCCcccccceEEEEEEECCCCCCCC
Confidence            799999999875  899999999999999999999999999999999886543 35799999999999999999999999


Q ss_pred             CCCEEEecccCCCCCCcccccCCCC-CCccc---ccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhh
Q 018529           88 VGDHVLPVFTGECGDCRHCRFSING-EPVNH---FLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLN  163 (354)
Q Consensus        88 ~Gd~V~~~~~~~~~~c~~c~~~~~~-~~~~~---~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~  163 (354)
                      +||||++.+..+|+.|.+|+.+... |....   ....|+|+||+.+|++.++++|+++++++|++++++++|||+++.+
T Consensus        81 vGdrV~~~~~~~cg~c~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~al~~  160 (343)
T 2eih_A           81 PGDEVVINPGLSCGRCERCLAGEDNLCPRYQILGEHRHGTYAEYVVLPEANLAPKPKNLSFEEAAAIPLTFLTAWQMVVD  160 (343)
T ss_dssp             TTCEEEECCEECCSCSHHHHTTCGGGCTTCEETTTSSCCSSBSEEEEEGGGEEECCTTSCHHHHHHSHHHHHHHHHHHTT
T ss_pred             CCCEEEECCCCCcccchhhccCcccccccccccCcCCCccceeEEEeChHHeEECCCCCCHHHHhhchhhHHHHHHHHHH
Confidence            9999999999999999999866532 32222   2235999999999999999999999999999999999999999766


Q ss_pred             hcCCCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC-Ccc
Q 018529          164 VAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVD  241 (354)
Q Consensus       164 ~~~~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~~d  241 (354)
                      .+++++|++|||+|+ |++|++++|+|+..|+ +|+++++++++.++++++|++.++++.+.+  +.+.+++.+++ ++|
T Consensus       161 ~~~~~~g~~vlV~Gasg~iG~~~~~~a~~~G~-~Vi~~~~~~~~~~~~~~~ga~~~~d~~~~~--~~~~~~~~~~~~~~d  237 (343)
T 2eih_A          161 KLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGA-RVIATAGSEDKLRRAKALGADETVNYTHPD--WPKEVRRLTGGKGAD  237 (343)
T ss_dssp             TSCCCTTCEEEECSTTSTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHTCSEEEETTSTT--HHHHHHHHTTTTCEE
T ss_pred             hcCCCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhcCCCEEEcCCccc--HHHHHHHHhCCCCce
Confidence            679999999999998 9999999999999999 999999999999999999999998887654  78888888876 899


Q ss_pred             EEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhh-hccccEEEEEeccCCCCCCCHHHHHHHHHccCCCC
Q 018529          242 RSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLEL  320 (354)
Q Consensus       242 vv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~  320 (354)
                      ++||++|. +.++.++++++++ |+++.+|..... ...+.... +.+++++.|++..   ..++++++++++.+|+++ 
T Consensus       238 ~vi~~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~l~~~g~l~-  310 (343)
T 2eih_A          238 KVVDHTGA-LYFEGVIKATANG-GRIAIAGASSGY-EGTLPFAHVFYRQLSILGSTMA---SKSRLFPILRFVEEGKLK-  310 (343)
T ss_dssp             EEEESSCS-SSHHHHHHHEEEE-EEEEESSCCCSC-CCCCCTTHHHHTTCEEEECCSC---CGGGHHHHHHHHHHTSSC-
T ss_pred             EEEECCCH-HHHHHHHHhhccC-CEEEEEecCCCC-cCccCHHHHHhCCcEEEEecCc---cHHHHHHHHHHHHcCCCC-
Confidence            99999994 8899999999997 999999976532 11233222 3589999987632   246799999999999765 


Q ss_pred             CCceeeeeccccHHHHHHHHhcCCc-eeEEEec
Q 018529          321 EKFITHRIPFSEINKAFEYMVKGEG-LRCIISM  352 (354)
Q Consensus       321 ~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~~  352 (354)
                       +.++++|+|+++++||+.+.+++. +|+||++
T Consensus       311 -~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  342 (343)
T 2eih_A          311 -PVVGQVLPLEAAAEGHRLLEERRVFGKVVLQV  342 (343)
T ss_dssp             -CCEEEEEEGGGHHHHHHHHHTTCSSSEEEEEC
T ss_pred             -CceeEEeeHHHHHHHHHHHHcCCCceEEEEec
Confidence             568899999999999999988764 7999875

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=100.00  E-value=1.3e-56  Score=407.10  Aligned_cols=326  Identities=27%  Similarity=0.392  Sum_probs=259.7

Q ss_pred             hcceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCC--CCCCCcccccceeEEEEEeCCCCCCCC
Q 018529           10 TCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ--TPLFPRIFGHEAAGVVESVGEGVSDLE   87 (354)
Q Consensus        10 ~~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~--~~~~p~~~G~e~~G~V~~vG~~~~~~~   87 (354)
                      +|||+++.+++.+++++++|.|+|+++||+|||.++|||++|++.+.|..+  ...+|.++|||++|+|+++|++ ++|+
T Consensus         3 ~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~p~i~G~E~~G~V~~vG~~-~~~~   81 (344)
T 2h6e_A            3 KSKAALLKKFSEPLSIEDVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVEAKQGFRLPIILGHENAGTIVEVGEL-AKVK   81 (344)
T ss_dssp             EEEBCEECSCCC-----EEEECCCCTTCEEEEEEEEECCHHHHHHHTTSCCCTTCCSSEECCCCEEEEEEEECTT-CCCC
T ss_pred             eeEEEEEecCCCCCeEEEeeCCCCCCCEEEEEEEEEEechhhHHHHcCCCcccCCCCCccccccceEEEEEECCC-CCCC
Confidence            799999999986799999999999999999999999999999999988654  3467999999999999999999 9999


Q ss_pred             CCCEEEecccCCCCCCcccccCCCC-CCc---ccccccccceeeEEee-ccceEECCCCCCccchhhcccchhhhhhhhh
Q 018529           88 VGDHVLPVFTGECGDCRHCRFSING-EPV---NHFLGTSTFSEYTVVH-SGCVAKINPLAPLDKVCILSCGVSTGLGATL  162 (354)
Q Consensus        88 ~Gd~V~~~~~~~~~~c~~c~~~~~~-~~~---~~~~~~g~~a~~~~v~-~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~  162 (354)
                      +||||++.+..+|+.|.+|+.+... |..   .+....|+|+||+.+| ++.++++ +++++++||.+++++.|||+++.
T Consensus        82 ~GdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~~~~~i-~~l~~~~aa~l~~~~~ta~~al~  160 (344)
T 2h6e_A           82 KGDNVVVYATWGDLTCRYCREGKFNICKNQIIPGQTTNGGFSEYMLVKSSRWLVKL-NSLSPVEAAPLADAGTTSMGAIR  160 (344)
T ss_dssp             TTCEEEECSCBCCSCSTTGGGTCGGGCTTCBCBTTTBCCSSBSEEEESCGGGEEEE-SSSCHHHHGGGGTHHHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCChhhhCCCcccCCCccccccccCCcceeeEEecCcccEEEe-CCCCHHHhhhhhhhhHHHHHHHH
Confidence            9999999999999999999876532 222   2223469999999999 9999999 99999999999999999999975


Q ss_pred             hh----cCCCCCCeEEEEcCChhHHHHHHHHHHc--CCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHc
Q 018529          163 NV----AKPERGSSVAVFGLGAVGLAAAEGARIA--GASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMT  236 (354)
Q Consensus       163 ~~----~~~~~~~~vlI~G~g~~G~~a~~~a~~~--g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~  236 (354)
                      +.    +++ +|++|||+|+|++|++++|+|+.+  |+ +|++++++++++++++++|+++++++.+.    .+.+++++
T Consensus       161 ~~~~~~~~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~----~~~~~~~~  234 (344)
T 2h6e_A          161 QALPFISKF-AEPVVIVNGIGGLAVYTIQILKALMKNI-TIVGISRSKKHRDFALELGADYVSEMKDA----ESLINKLT  234 (344)
T ss_dssp             HHHHHHTTC-SSCEEEEECCSHHHHHHHHHHHHHCTTC-EEEEECSCHHHHHHHHHHTCSEEECHHHH----HHHHHHHH
T ss_pred             hhhhcccCC-CCCEEEEECCCHHHHHHHHHHHHhcCCC-EEEEEeCCHHHHHHHHHhCCCEEeccccc----hHHHHHhh
Confidence            54    288 999999999999999999999999  99 89999999999999999999999876531    12344555


Q ss_pred             CC-CccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhh-hccccEEEEEeccCCCCCCCHHHHHHHHH
Q 018529          237 NG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNYKPRTDLPSVVDMYM  314 (354)
Q Consensus       237 ~~-~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~~~  314 (354)
                      ++ ++|+|||++|++..++.++++++++ |+++.+|.....  ..+.... +.+++++.|++...   .++++++++++.
T Consensus       235 ~g~g~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~g~~~~~--~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~l~~  308 (344)
T 2h6e_A          235 DGLGASIAIDLVGTEETTYNLGKLLAQE-GAIILVGMEGKR--VSLEAFDTAVWNKKLLGSNYGS---LNDLEDVVRLSE  308 (344)
T ss_dssp             TTCCEEEEEESSCCHHHHHHHHHHEEEE-EEEEECCCCSSC--CCCCHHHHHHTTCEEEECCSCC---HHHHHHHHHHHH
T ss_pred             cCCCccEEEECCCChHHHHHHHHHhhcC-CEEEEeCCCCCC--cccCHHHHhhCCcEEEEEecCC---HHHHHHHHHHHH
Confidence            56 8999999999977999999999997 999999976532  2333333 34899999976432   357899999999


Q ss_pred             ccCCCCCCceeeeeccccHHHHHHHHhcCCc-eeEEEec
Q 018529          315 NKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM  352 (354)
Q Consensus       315 ~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~~  352 (354)
                      ++++++.  + ++|+|+++++||+.+.+++. +|+||++
T Consensus       309 ~g~i~~~--i-~~~~l~~~~~A~~~~~~~~~~gKvvl~~  344 (344)
T 2h6e_A          309 SGKIKPY--I-IKVPLDDINKAFTNLDEGRVDGRQVITP  344 (344)
T ss_dssp             TTSSCCC--E-EEECC----------------CEEEECC
T ss_pred             cCCCCcc--e-EEEeHHHHHHHHHHHHcCCCceEEEEeC
Confidence            9977654  6 99999999999999988775 7998864

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=100.00  E-value=2.9e-57  Score=418.91  Aligned_cols=334  Identities=21%  Similarity=0.266  Sum_probs=284.9

Q ss_pred             hcceeeeccCCCceEEEEeecCCC-CC-----CeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCC
Q 018529           10 TCKAAVAWEAGKPLIIQDVEVAPP-QA-----MEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGV   83 (354)
Q Consensus        10 ~~~a~~~~~~~~~l~~~~~~~p~~-~~-----~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~   83 (354)
                      +|||+++.+++. ++++++|.|+| ++     +||+|||.++|||++|++++.|..+ ..+|.++|||++|+|+++|+++
T Consensus         2 ~MkA~~~~~~~~-l~~~~~p~P~~~~~~~~~~~eVlVkv~a~gic~~D~~~~~G~~~-~~~p~v~GhE~~G~V~~vG~~v   79 (398)
T 2dph_A            2 GNKSVVYHGTRD-LRVETVPYPKLEHNNRKLEHAVILKVVSTNICGSDQHIYRGRFI-VPKGHVLGHEITGEVVEKGSDV   79 (398)
T ss_dssp             CEEEEEEEETTE-EEEEEECCCCSEETTEECTTCEEEEEEEEECCHHHHHHHTTSSC-CCTTCBCCCCEEEEEEEECTTC
T ss_pred             ccEEEEEEcCCC-EEEEEccCCCCCCCcCCCCCeEEEEEEEEeecHHHHHHhcCCCC-CCCCcccCCceEEEEEEECCCC
Confidence            699999999875 99999999987 68     9999999999999999999987543 4578999999999999999999


Q ss_pred             CCCCCCCEEEecccCCCCCCcccccCCCCCCcc------------cc---cccccceeeEEeecc--ceEECCCCCCccc
Q 018529           84 SDLEVGDHVLPVFTGECGDCRHCRFSINGEPVN------------HF---LGTSTFSEYTVVHSG--CVAKINPLAPLDK  146 (354)
Q Consensus        84 ~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~------------~~---~~~g~~a~~~~v~~~--~~~~~P~~~~~~~  146 (354)
                      ++|++||||++.+..+|+.|.+|+.+....+..            +.   ...|+|+||+++|++  .++++|+++++++
T Consensus        80 ~~~~vGDrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~G~~~~~~~G~~aey~~v~~~~~~~~~iP~~~~~~~  159 (398)
T 2dph_A           80 ELMDIGDLVSVPFNVACGRCRNCKEARSDVCENNLVNPDADLGAFGFDLKGWSGGQAEYVLVPYADYMLLKFGDKEQAME  159 (398)
T ss_dssp             CSCCTTCEEECCSBCCCSCSHHHHTTCGGGCCCTTTCSSSSCCBTTTTBSSCCCSSBSEEEESSHHHHCEECSSHHHHHH
T ss_pred             CCCCCCCEEEEcCCCCCCCChhhhCcCcccCCCccccccccccccccccCCCCceeeeeEEeccccCeEEECCCCCChhh
Confidence            999999999999999999999997665332211            11   135999999999987  8999999999998


Q ss_pred             ----hhhcccchhhhhhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCC
Q 018529          147 ----VCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS  222 (354)
Q Consensus       147 ----aa~l~~~~~~a~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~  222 (354)
                          ||+++++++|||+++ +.+++++|++|||+|+|++|++++|+|+.+|+.+|++++++++++++++++|++ ++++.
T Consensus       160 ~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~-~i~~~  237 (398)
T 2dph_A          160 KIKDLTLISDILPTGFHGC-VSAGVKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDAGFE-TIDLR  237 (398)
T ss_dssp             THHHHTTTTTHHHHHHHHH-HHTTCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHTTTCE-EEETT
T ss_pred             hcchhhhhcCHHHHHHHHH-HHcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCc-EEcCC
Confidence                888999999999997 788999999999999999999999999999988899999999999999999996 88887


Q ss_pred             CCChhH-HHHHHHHcCC-CccEEEEcccChH--------------hHHHHHHHhhCCCceEEEEcCCCC-----------
Q 018529          223 EHDRPI-QEVIAEMTNG-GVDRSVECTGNID--------------NMISAFECVHDGWGVAVLVGVPSK-----------  275 (354)
Q Consensus       223 ~~~~~~-~~~i~~~~~~-~~dvv~d~~g~~~--------------~~~~~~~~l~~~~g~~v~~g~~~~-----------  275 (354)
                      +.+  + .+.+++++++ ++|+|||++|+..              .++.++++++++ |+++.+|....           
T Consensus       238 ~~~--~~~~~~~~~~~g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~g-G~iv~~G~~~~~~~~~~~~~~~  314 (398)
T 2dph_A          238 NSA--PLRDQIDQILGKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAG-GAIGIPGIYVGSDPDPVNKDAG  314 (398)
T ss_dssp             SSS--CHHHHHHHHHSSSCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEE-EEEECCSCCCSCCSSCSSHHHH
T ss_pred             Ccc--hHHHHHHHHhCCCCCCEEEECCCCccccccccccccccHHHHHHHHHHHhcC-CEEEEecccccccccccccccc
Confidence            654  4 7888888887 8999999999742              689999999997 99999997621           


Q ss_pred             Cceeecchhh-hccccEEEEEeccCCCCCCCHHHHHHHHHccCCC--CCCceeeeeccccHHHHHHHHhcCCceeEEEec
Q 018529          276 DAVFMTKPIN-VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLE--LEKFITHRIPFSEINKAFEYMVKGEGLRCIISM  352 (354)
Q Consensus       276 ~~~~~~~~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~l~~~~~a~~~~~~~~~~k~vi~~  352 (354)
                      .....+.... +.+++++.|++..   ..++++++++++.+|+++  +.++++++|+|+++++||+.+.+++.+|+||++
T Consensus       315 ~~~~~~~~~~~~~k~~~i~g~~~~---~~~~~~~~~~l~~~g~l~~~~~~~i~~~~~l~~~~~A~~~~~~~~~gKvvv~~  391 (398)
T 2dph_A          315 SGRLHLDFGKMWTKSIRIMTGMAP---VTNYNRHLTEAILWDQMPYLSKVMNIEVITLDQAPDGYAKFDKGSPAKFVIDP  391 (398)
T ss_dssp             TTEEEEEHHHHHHTTCEEECSSCC---GGGTHHHHHHHHHTTCCHHHHHHHCEEEECSTTHHHHHHHHHTTCSCEEEECT
T ss_pred             CCcccccHHHHhhcCCEEEEeccC---cHHHHHHHHHHHHcCCCCccchhhEEEEEcHHHHHHHHHHHhcCCceEEEEec
Confidence            1122333322 4488998876432   235789999999999888  766788999999999999999887779999987


Q ss_pred             C
Q 018529          353 E  353 (354)
Q Consensus       353 ~  353 (354)
                      +
T Consensus       392 ~  392 (398)
T 2dph_A          392 H  392 (398)
T ss_dssp             T
T ss_pred             C
Confidence            4

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=5e-57  Score=412.66  Aligned_cols=333  Identities=25%  Similarity=0.357  Sum_probs=276.1

Q ss_pred             ccchhcceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCC
Q 018529            6 GLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSD   85 (354)
Q Consensus         6 ~~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~   85 (354)
                      ...|+|+|+.+.+++++++++++|.|+|++|||||||.++|||++|++++.|..+...+|.++|||++|+|+++|+++++
T Consensus        18 ~~~~~~~a~~~~~~~~~l~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G~V~~vG~~V~~   97 (369)
T 1uuf_A           18 KAGLKIKAVGAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVPGHEIVGRVVAVGDQVEK   97 (369)
T ss_dssp             -----CEEEEBSSTTSCCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHCTTSCCCSSBCCCCCEEEEEEEECTTCCS
T ss_pred             hcCceEEEEEEcCCCCCcEEEEecCCCCCCCeEEEEEEEEeecHHHHHHhcCCCCCCCCCeecccCceEEEEEECCCCCC
Confidence            35689999999888778999999999999999999999999999999999886554567999999999999999999999


Q ss_pred             CCCCCEEEecccC-CCCCCcccccCCCCCCc-c-----------cccccccceeeEEeeccceEECCCC-CCccchhhcc
Q 018529           86 LEVGDHVLPVFTG-ECGDCRHCRFSINGEPV-N-----------HFLGTSTFSEYTVVHSGCVAKINPL-APLDKVCILS  151 (354)
Q Consensus        86 ~~~Gd~V~~~~~~-~~~~c~~c~~~~~~~~~-~-----------~~~~~g~~a~~~~v~~~~~~~~P~~-~~~~~aa~l~  151 (354)
                      |++||||++.+.. .|+.|.+|+.+....+. .           +....|+|+||+.+|++.++++|++ +++++||+++
T Consensus        98 ~~vGDrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~g~~~~G~~aeyv~v~~~~~~~~P~~~ls~~~aa~l~  177 (369)
T 1uuf_A           98 YAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRHPQEQLAAVAPLL  177 (369)
T ss_dssp             CCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCSSTTSBCCCSSBSEEEEEGGGCEECCSCGGGHHHHGGGG
T ss_pred             CCCCCEEEEccCCCCCCCCcccCCCCcccCcchhcccccccccCCCCCCCcccceEEEcchhEEECCCCCCCHHHhhhhh
Confidence            9999999987764 59999999876533221 1           2234699999999999999999999 9999999999


Q ss_pred             cchhhhhhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHH
Q 018529          152 CGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEV  231 (354)
Q Consensus       152 ~~~~~a~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~  231 (354)
                      +++.|||+++.+ .++++|++|||+|+|++|++++|+|+.+|+ +|++++++++++++++++|++.++++.+.+  +.  
T Consensus       178 ~~~~tA~~al~~-~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga-~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~--~~--  251 (369)
T 1uuf_A          178 CAGITTYSPLRH-WQAGPGKKVGVVGIGGLGHMGIKLAHAMGA-HVVAFTTSEAKREAAKALGADEVVNSRNAD--EM--  251 (369)
T ss_dssp             THHHHHHHHHHH-TTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHTCSEEEETTCHH--HH--
T ss_pred             hhHHHHHHHHHh-cCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCcEEeccccHH--HH--
Confidence            999999999754 689999999999999999999999999999 799999999999999999999999886532  33  


Q ss_pred             HHHHcCCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhh-hccccEEEEEeccCCCCCCCHHHHH
Q 018529          232 IAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNYKPRTDLPSVV  310 (354)
Q Consensus       232 i~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~~~~~~~~~~  310 (354)
                       +++. +++|+|||++|++..++.++++++++ |+++.+|...... ..+.... +.+++++.|++...   .+++++++
T Consensus       252 -~~~~-~g~Dvvid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~~-~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~  324 (369)
T 1uuf_A          252 -AAHL-KSFDFILNTVAAPHNLDDFTTLLKRD-GTMTLVGAPATPH-KSPEVFNLIMKRRAIAGSMIGG---IPETQEML  324 (369)
T ss_dssp             -HTTT-TCEEEEEECCSSCCCHHHHHTTEEEE-EEEEECCCC--------CHHHHHTTTCEEEECCSCC---HHHHHHHH
T ss_pred             -HHhh-cCCCEEEECCCCHHHHHHHHHHhccC-CEEEEeccCCCCc-cccCHHHHHhCCcEEEEeecCC---HHHHHHHH
Confidence             3333 58999999999866899999999997 9999999765322 1233322 34899999976532   25689999


Q ss_pred             HHHHccCCCCCCceeeeeccccHHHHHHHHhcCCc-eeEEEecCC
Q 018529          311 DMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISMED  354 (354)
Q Consensus       311 ~~~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~~~d  354 (354)
                      +++.+|++++.  + ++|||+++++||+.+.+++. +|+||++++
T Consensus       325 ~l~~~g~i~~~--i-~~~~l~~~~~A~~~~~~~~~~gKvvi~~~~  366 (369)
T 1uuf_A          325 DFCAEHGIVAD--I-EMIRADQINEAYERMLRGDVKYRFVIDNRT  366 (369)
T ss_dssp             HHHHHHTCCCC--E-EEECGGGHHHHHHHHHTTCSSSEEEEEGGG
T ss_pred             HHHHhCCCCcc--e-EEEcHHHHHHHHHHHHcCCCceEEEEecCC
Confidence            99999987654  4 57999999999999988774 799998753

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=100.00  E-value=1.1e-56  Score=415.58  Aligned_cols=335  Identities=21%  Similarity=0.302  Sum_probs=284.6

Q ss_pred             cchhcceeeeccCCCceEEEEeecCC-CCCCeEEEEEeeeecCccchhhhccCCC-------CCCCCcccccceeEEEEE
Q 018529            7 LILTCKAAVAWEAGKPLIIQDVEVAP-PQAMEVRIKIKYTSLCRTDLYFWESKGQ-------TPLFPRIFGHEAAGVVES   78 (354)
Q Consensus         7 ~~~~~~a~~~~~~~~~l~~~~~~~p~-~~~~evlV~v~~~~i~~~D~~~~~~~~~-------~~~~p~~~G~e~~G~V~~   78 (354)
                      .|.+|++.+++.++. ++++++|.|+ |++|||||||.++|||++|++++.|...       ...+|.++|||++|+|++
T Consensus        27 ~~~~m~a~~~~~~~~-l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~~~P~i~G~E~~G~V~~  105 (404)
T 3ip1_A           27 GKLTWLGSKVWRYPE-VRVEEVPEPRIEKPTEIIIKVKACGICGSDVHMAQTDEEGYILYPGLTGFPVTLGHEFSGVVVE  105 (404)
T ss_dssp             TTBBSCGGGTEEEEE-EEEEEECCCCCCSTTEEEEEEEEEECCHHHHHHHCBCTTSBBSCCSCBCSSEECCCEEEEEEEE
T ss_pred             hhhhcceEEEEeCCc-eEEEEcCCCCCCCcCEEEEEEeEeeeCHHHHHHhcCCCCccccccccCCCCcccCccceEEEEE
Confidence            445666666666654 8999999999 9999999999999999999999876421       236799999999999999


Q ss_pred             eCCCC------CCCCCCCEEEecccCCCCCCcccccCCCC-CCc---ccccccccceeeEEeeccceEECCCCCC-----
Q 018529           79 VGEGV------SDLEVGDHVLPVFTGECGDCRHCRFSING-EPV---NHFLGTSTFSEYTVVHSGCVAKINPLAP-----  143 (354)
Q Consensus        79 vG~~~------~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~-~~~---~~~~~~g~~a~~~~v~~~~~~~~P~~~~-----  143 (354)
                      +|+++      ++|++||||++.+..+|+.|++|+.+... |..   .+....|+|+||+.+|++.++++|++++     
T Consensus       106 vG~~v~~~~~~~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~~~  185 (404)
T 3ip1_A          106 AGPEAINRRTNKRFEIGEPVCAEEMLWCGHCRPCAEGFPNHCENLNELGFNVDGAFAEYVKVDAKYAWSLRELEGVYEGD  185 (404)
T ss_dssp             ECTTCEETTTTEECCTTCEEEECSEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGEEECGGGBTTBCTH
T ss_pred             ECCCccccccCCCCCCCCEEEECCccCCCCCHHHHCcCcccCccccccCCCCCCCCcceEEechHHeEeccccccccccc
Confidence            99999      88999999999999999999999876533 222   3344569999999999999999999886     


Q ss_pred             -ccchhhcccchhhhhhhhhhh-cCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcC
Q 018529          144 -LDKVCILSCGVSTGLGATLNV-AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT  221 (354)
Q Consensus       144 -~~~aa~l~~~~~~a~~~l~~~-~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~  221 (354)
                       +.++|+++.++++||+++... +++++|++|||+|+|++|++++|+|+.+|+.+|++++++++|+++++++|+++++++
T Consensus       186 ~~~~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~  265 (404)
T 3ip1_A          186 RLFLAGSLVEPTSVAYNAVIVRGGGIRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGADHVIDP  265 (404)
T ss_dssp             HHHHHHHTHHHHHHHHHHHTTTSCCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECT
T ss_pred             cchhHHhhhhHHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEEcC
Confidence             355888999999999997654 489999999999999999999999999999899999999999999999999999998


Q ss_pred             CCCChhHHHHHHHHcCC-CccEEEEcccCh-HhHHHHHHHh----hCCCceEEEEcCCCCCceeecchhh-hccccEEEE
Q 018529          222 SEHDRPIQEVIAEMTNG-GVDRSVECTGNI-DNMISAFECV----HDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKG  294 (354)
Q Consensus       222 ~~~~~~~~~~i~~~~~~-~~dvv~d~~g~~-~~~~~~~~~l----~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g  294 (354)
                      .+.+  +.+.+++++++ ++|+|||++|++ ..+..+++++    +++ |+++.+|......  .+.... +.+++++.|
T Consensus       266 ~~~~--~~~~i~~~t~g~g~D~vid~~g~~~~~~~~~~~~l~~~~~~~-G~iv~~G~~~~~~--~~~~~~~~~~~~~i~g  340 (404)
T 3ip1_A          266 TKEN--FVEAVLDYTNGLGAKLFLEATGVPQLVWPQIEEVIWRARGIN-ATVAIVARADAKI--PLTGEVFQVRRAQIVG  340 (404)
T ss_dssp             TTSC--HHHHHHHHTTTCCCSEEEECSSCHHHHHHHHHHHHHHCSCCC-CEEEECSCCCSCE--EECHHHHHHTTCEEEE
T ss_pred             CCCC--HHHHHHHHhCCCCCCEEEECCCCcHHHHHHHHHHHHhccCCC-cEEEEeCCCCCCC--cccHHHHhccceEEEE
Confidence            8766  89999999988 999999999996 3677777787    997 9999999876544  333333 348999999


Q ss_pred             EeccCCCCCCCHHHHHHHHHccCCCCCCceeeeeccccHHHHHHHHhcCCceeEEEecC
Q 018529          295 TFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISME  353 (354)
Q Consensus       295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~~k~vi~~~  353 (354)
                      ++...  ..++++++++++.+| +++.++++++|+|+++++||+.+.   .+|+||+++
T Consensus       341 ~~~~~--~~~~~~~~~~ll~~g-l~~~~~i~~~~~l~~~~~A~~~~~---~GKvvl~~~  393 (404)
T 3ip1_A          341 SQGHS--GHGTFPRVISLMASG-MDMTKIISKTVSMEEIPEYIKRLQ---TDKSLVKVT  393 (404)
T ss_dssp             CCCCC--STTHHHHHHHHHHTT-CCGGGGCCEEECGGGHHHHHHHTT---TCTTCSCEE
T ss_pred             ecCCC--chHHHHHHHHHHHcC-CChhheEEEEeeHHHHHHHHHHHh---CCcEEEecC
Confidence            86422  235799999999999 988888999999999999999887   458887764

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=100.00  E-value=2.5e-55  Score=397.09  Aligned_cols=319  Identities=25%  Similarity=0.318  Sum_probs=277.5

Q ss_pred             CCCccccchhcceeeeccCCCc--eEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEE
Q 018529            1 MSSTAGLILTCKAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVES   78 (354)
Q Consensus         1 m~~~~~~~~~~~a~~~~~~~~~--l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~   78 (354)
                      |++  ++|.+|||+++.+++.+  +++++.|.|+|++|||||||.++|||++|++++.|..+ ..+|.++|||++|+|++
T Consensus         1 M~~--~~p~~mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~-~~~P~i~G~e~~G~V~~   77 (334)
T 3qwb_A            1 MKC--TIPEQQKVILIDEIGGYDVIKYEDYPVPSISEEELLIKNKYTGVNYIESYFRKGIYP-CEKPYVLGREASGTVVA   77 (334)
T ss_dssp             ------CCSEEEEEEESSSSSGGGEEEEEEECCCCCTTEEEEEEEEEECCTTHHHHHHTSSC-CCSSEECCSEEEEEEEE
T ss_pred             CCC--CCchheEEEEEecCCCCceeEEEeccCCCCCCCEEEEEEEEEecCHHHHHHHCCCCC-CCCCCccccceEEEEEE
Confidence            554  38999999999999876  99999999999999999999999999999999888665 45799999999999999


Q ss_pred             eCCCCCCCCCCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEee-ccceEECCCCCCccc---hhhcccch
Q 018529           79 VGEGVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVH-SGCVAKINPLAPLDK---VCILSCGV  154 (354)
Q Consensus        79 vG~~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~-~~~~~~~P~~~~~~~---aa~l~~~~  154 (354)
                      +|+++++|++||||++.                        ..|+|+||+.++ ++.++++|+++++++   |+++++++
T Consensus        78 vG~~v~~~~~GdrV~~~------------------------~~G~~aey~~v~~~~~~~~~P~~~~~~~~~~aa~~~~~~  133 (334)
T 3qwb_A           78 KGKGVTNFEVGDQVAYI------------------------SNSTFAQYSKISSQGPVMKLPKGTSDEELKLYAAGLLQV  133 (334)
T ss_dssp             ECTTCCSCCTTCEEEEE------------------------CSSCSBSEEEEETTSSEEECCTTCCHHHHHHHHHHHHHH
T ss_pred             ECCCCCCCCCCCEEEEe------------------------eCCcceEEEEecCcceEEECCCCCCHHHhhhhhhhhhHH
Confidence            99999999999999865                        468999999999 999999999999999   88888999


Q ss_pred             hhhhhhhhhhcCCCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHH
Q 018529          155 STGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIA  233 (354)
Q Consensus       155 ~~a~~~l~~~~~~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~  233 (354)
                      .|||+++.+.+++++|++|||+|+ |++|++++|+|+..|+ +|++++++++++++++++|++.++++.+.+  +.+.++
T Consensus       134 ~ta~~~l~~~~~~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~--~~~~~~  210 (334)
T 3qwb_A          134 LTALSFTNEAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGA-HTIAVASTDEKLKIAKEYGAEYLINASKED--ILRQVL  210 (334)
T ss_dssp             HHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSEEEETTTSC--HHHHHH
T ss_pred             HHHHHHHHHhccCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCcEEEeCCCch--HHHHHH
Confidence            999999888889999999999995 9999999999999999 899999999999999999999999988766  888999


Q ss_pred             HHcCC-CccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhh-hccccEEEEEeccCCCCC-C----CH
Q 018529          234 EMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNYKPR-T----DL  306 (354)
Q Consensus       234 ~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~~~-~----~~  306 (354)
                      +++++ ++|+|||++|+ ..++.++++++++ |+++.+|...... ..+.... +.+++++.+++...+... +    .+
T Consensus       211 ~~~~~~g~D~vid~~g~-~~~~~~~~~l~~~-G~iv~~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (334)
T 3qwb_A          211 KFTNGKGVDASFDSVGK-DTFEISLAALKRK-GVFVSFGNASGLI-PPFSITRLSPKNITLVRPQLYGYIADPEEWKYYS  287 (334)
T ss_dssp             HHTTTSCEEEEEECCGG-GGHHHHHHHEEEE-EEEEECCCTTCCC-CCBCGGGGTTTTCEEECCCGGGGSCSHHHHHHHH
T ss_pred             HHhCCCCceEEEECCCh-HHHHHHHHHhccC-CEEEEEcCCCCCC-CCcchhhhhhCceEEEEEEeccccCCHHHHHHHH
Confidence            99877 99999999998 8899999999997 9999999865322 2233332 348899998766544321 2    24


Q ss_pred             HHHHHHHHccCCCCCCceeeeeccccHHHHHHHHhcCCc-eeEEEecCC
Q 018529          307 PSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISMED  354 (354)
Q Consensus       307 ~~~~~~~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~~~d  354 (354)
                      +++++++.+|++++.  ++++|+|+++++||+.+.+++. +|+||++++
T Consensus       288 ~~~~~l~~~g~l~~~--i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~~q  334 (334)
T 3qwb_A          288 DEFFGLVNSKKLNIK--IYKTYPLRDYRTAAADIESRKTVGKLVLEIPQ  334 (334)
T ss_dssp             HHHHHHHHTTSSCCC--EEEEEEGGGHHHHHHHHHTTCCCBEEEEECCC
T ss_pred             HHHHHHHHCCCccCc--eeeEEcHHHHHHHHHHHHhCCCceEEEEecCC
Confidence            688999999988765  8899999999999999998875 699999874

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=100.00  E-value=2.4e-57  Score=413.71  Aligned_cols=326  Identities=20%  Similarity=0.266  Sum_probs=279.0

Q ss_pred             cceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCC---CcccccceeEEEEEeCCCCCCCC
Q 018529           11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLF---PRIFGHEAAGVVESVGEGVSDLE   87 (354)
Q Consensus        11 ~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~---p~~~G~e~~G~V~~vG~~~~~~~   87 (354)
                      |||+++.+++++++++++|.|+|++|||||||.++|||++|++++.|..+...+   |.++|||++| |+++|++ ++|+
T Consensus         1 MkA~~~~~~~~~l~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G-V~~vG~~-~~~~   78 (357)
T 2b5w_A            1 MKAIAVKRGEDRPVVIEKPRPEPESGEALVRTLRVGVCGTDHEVIAGGHGGFPEGEDHLVLGHEAVG-VVVDPND-TELE   78 (357)
T ss_dssp             CEEEEEETTCSSCEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHSCSTTSCTTCSEEECCSEEEE-EEEECTT-SSCC
T ss_pred             CeEEEEeCCCCceEEEECCCCCCCcCEEEEEEeEEeechhcHHHHcCCCCCCCCCCCCcccCceeEE-EEEECCC-CCCC
Confidence            799999999888999999999999999999999999999999999886554456   8999999999 9999999 9999


Q ss_pred             CCCEEEecccCC--CCCCcccccCCCC-CCccccc------ccccceeeEEeeccceEECCCCCCccchhhcccchhhhh
Q 018529           88 VGDHVLPVFTGE--CGDCRHCRFSING-EPVNHFL------GTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGL  158 (354)
Q Consensus        88 ~Gd~V~~~~~~~--~~~c~~c~~~~~~-~~~~~~~------~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~  158 (354)
                      +||||++.+...  |++|++|+.+... |......      ..|+|+||+.+|++.++++|++++ + +|+++.+++|||
T Consensus        79 vGdrV~~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~~~-~-~aal~~~~~ta~  156 (357)
T 2b5w_A           79 EGDIVVPTVRRPPASGTNEYFERDQPDMAPDGMYFERGIVGAHGYMSEFFTSPEKYLVRIPRSQA-E-LGFLIEPISITE  156 (357)
T ss_dssp             TTCEEEECSEECCTTCCCHHHHTTCGGGCCTTSCEEETTBEECCSCBSEEEEEGGGEEECCGGGS-T-TGGGHHHHHHHH
T ss_pred             CCCEEEECCcCCCCCCCChHHhCcCcccCCCCcccccCccCCCcceeeEEEEchHHeEECCCCcc-h-hhhhhchHHHHH
Confidence            999999998888  9999999876533 3332222      359999999999999999999999 5 455778999999


Q ss_pred             hhhhhhcCCCCC------CeEEEEcCChhHHHH-HHHH-HHcCCcEEEEEcCChh---hHHHHHhcCCceEEcCCCCChh
Q 018529          159 GATLNVAKPERG------SSVAVFGLGAVGLAA-AEGA-RIAGASRIIGVDRSSK---RFEEAKKFGVTDFVNTSEHDRP  227 (354)
Q Consensus       159 ~~l~~~~~~~~~------~~vlI~G~g~~G~~a-~~~a-~~~g~~~vi~v~~~~~---~~~~~~~lg~~~v~~~~~~~~~  227 (354)
                      +++ +.+++++|      ++|||+|+|++|+++ +|+| +.+|+++|++++++++   |+++++++|++++ ++.+.+  
T Consensus       157 ~al-~~~~~~~g~~~~~~~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~lGa~~v-~~~~~~--  232 (357)
T 2b5w_A          157 KAL-EHAYASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDATYV-DSRQTP--  232 (357)
T ss_dssp             HHH-HHHHHTTTTSCCCCCEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHTTCEEE-ETTTSC--
T ss_pred             HHH-HhcCCCCCcccCCCCEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHcCCccc-CCCccC--
Confidence            997 67889999      999999999999999 9999 9999955999999999   9999999999998 887655  


Q ss_pred             HHHHHHHHcCCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhh-----ccccEEEEEeccCCCC
Q 018529          228 IQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-----LNERTLKGTFFGNYKP  302 (354)
Q Consensus       228 ~~~~i~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~-----~~~~~i~g~~~~~~~~  302 (354)
                      +.+ ++++ ++++|+|||++|++..++.++++++++ |+++.+|.... ....+....+     .+++++.|++...   
T Consensus       233 ~~~-i~~~-~gg~Dvvid~~g~~~~~~~~~~~l~~~-G~iv~~g~~~~-~~~~~~~~~~~~~~~~~~~~i~g~~~~~---  305 (357)
T 2b5w_A          233 VED-VPDV-YEQMDFIYEATGFPKHAIQSVQALAPN-GVGALLGVPSD-WAFEVDAGAFHREMVLHNKALVGSVNSH---  305 (357)
T ss_dssp             GGG-HHHH-SCCEEEEEECSCCHHHHHHHHHHEEEE-EEEEECCCCCC-CCCCCCHHHHHHHHHHTTCEEEECCCCC---
T ss_pred             HHH-HHHh-CCCCCEEEECCCChHHHHHHHHHHhcC-CEEEEEeCCCC-CCceecHHHHhHHHHhCCeEEEEeccCC---
Confidence            666 7777 558999999999977899999999997 99999997652 2233443333     5899999876532   


Q ss_pred             CCCHHHHHHHHHcc--CCCCCCceeeeeccccHHHHHHHHhcCCceeEEEecCC
Q 018529          303 RTDLPSVVDMYMNK--QLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISMED  354 (354)
Q Consensus       303 ~~~~~~~~~~~~~~--~~~~~~~v~~~~~l~~~~~a~~~~~~~~~~k~vi~~~d  354 (354)
                      .++++++++++.++  ++ +.+.++++|+|+++++||+.+  +..+|+||+++|
T Consensus       306 ~~~~~~~~~l~~~g~~~~-~~~~i~~~~~l~~~~~A~~~~--~~~gKvvi~~~~  356 (357)
T 2b5w_A          306 VEHFEAATVTFTKLPKWF-LEDLVTGVHPLSEFEAAFDDD--DTTIKTAIEFST  356 (357)
T ss_dssp             HHHHHHHHHHHHHSCHHH-HHHHEEEEEEGGGGGGGGCCS--TTCCEEEEECCC
T ss_pred             HHHHHHHHHHHHhCchhh-hhhhcceeecHHHHHHHHHHh--CCCceEEEEecC
Confidence            35789999999999  76 667788999999999999988  456899999875

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=100.00  E-value=3.8e-55  Score=398.48  Aligned_cols=317  Identities=19%  Similarity=0.237  Sum_probs=276.6

Q ss_pred             ccchhcceeeeccCCCc--eEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCC-CCCCcccccceeEEEEEeCCC
Q 018529            6 GLILTCKAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEG   82 (354)
Q Consensus         6 ~~~~~~~a~~~~~~~~~--l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~   82 (354)
                      ++|.+|||+++.+++.+  +++.+.|.|+|++|||+|||.++|||++|++.+.|..+. ..+|.++|||++|+|+++|++
T Consensus        24 ~~p~~MkA~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~E~~G~V~~vG~~  103 (353)
T 4dup_A           24 SLPQEMRFVDLKSFGGPDVMVIGKRPLPVAGEGEVLVRAEAIGVNRPDIAQRQGSYPPPKDASPILGLELSGEIVGVGPG  103 (353)
T ss_dssp             CCCSSEEEEEESSSSSGGGEEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTSSCCCTTSCSSSCCEEEEEEEEECTT
T ss_pred             CCChheeEEEEccCCCccceEEEeccCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCccccccEEEEEEECCC
Confidence            37899999999998765  999999999999999999999999999999999887654 356899999999999999999


Q ss_pred             CCCCCCCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhh
Q 018529           83 VSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATL  162 (354)
Q Consensus        83 ~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~  162 (354)
                      +++|++||||++.                       ...|+|+||+.+|++.++++|+++++++||+++++++|||+++.
T Consensus       104 v~~~~vGdrV~~~-----------------------~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~  160 (353)
T 4dup_A          104 VSGYAVGDKVCGL-----------------------ANGGAYAEYCLLPAGQILPFPKGYDAVKAAALPETFFTVWANLF  160 (353)
T ss_dssp             CCSCCTTCEEEEE-----------------------CSSCCSBSEEEEEGGGEEECCTTCCHHHHHTSHHHHHHHHHHHT
T ss_pred             CCCCCCCCEEEEe-----------------------cCCCceeeEEEEcHHHcEeCCCCCCHHHHhhhhhHHHHHHHHHH
Confidence            9999999999875                       24589999999999999999999999999999999999999988


Q ss_pred             hhcCCCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCcc
Q 018529          163 NVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVD  241 (354)
Q Consensus       163 ~~~~~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~d  241 (354)
                      +.+++++|++|||+|+ |++|++++|+|+..|+ +|++++++++++++++++|++.++++.+.+  +.+.+++.+++++|
T Consensus       161 ~~~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~--~~~~~~~~~~~g~D  237 (353)
T 4dup_A          161 QMAGLTEGESVLIHGGTSGIGTTAIQLARAFGA-EVYATAGSTGKCEACERLGAKRGINYRSED--FAAVIKAETGQGVD  237 (353)
T ss_dssp             TTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHTCSEEEETTTSC--HHHHHHHHHSSCEE
T ss_pred             HhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCCEEEeCCchH--HHHHHHHHhCCCce
Confidence            8899999999999965 9999999999999999 899999999999999999999999988766  88889888844999


Q ss_pred             EEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhh-hccccEEEEEeccCCCCCC-------CHHHHHHHH
Q 018529          242 RSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNYKPRT-------DLPSVVDMY  313 (354)
Q Consensus       242 vv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~~~~-------~~~~~~~~~  313 (354)
                      ++||++|+ +.++.++++++++ |+++.+|.........+.... +.+++++.|++...+...+       .++++++++
T Consensus       238 vvid~~g~-~~~~~~~~~l~~~-G~iv~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~l~  315 (353)
T 4dup_A          238 IILDMIGA-AYFERNIASLAKD-GCLSIIAFLGGAVAEKVNLSPIMVKRLTVTGSTMRPRTAEEKRAIRDDLLSEVWPLL  315 (353)
T ss_dssp             EEEESCCG-GGHHHHHHTEEEE-EEEEECCCTTCSEEEEEECHHHHHTTCEEEECCSTTSCHHHHHHHHHHHHHHTHHHH
T ss_pred             EEEECCCH-HHHHHHHHHhccC-CEEEEEEecCCCcccCCCHHHHHhcCceEEEEeccccchhhhHHHHHHHHHHHHHHH
Confidence            99999998 6889999999997 999999987643322133333 4489999998765442110       167889999


Q ss_pred             HccCCCCCCceeeeeccccHHHHHHHHhcCCc-eeEEEec
Q 018529          314 MNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM  352 (354)
Q Consensus       314 ~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~~  352 (354)
                      .+|+++  +.++++|+|+++++||+.+.+++. +|+||++
T Consensus       316 ~~g~l~--~~i~~~~~l~~~~~A~~~l~~~~~~gKvvl~~  353 (353)
T 4dup_A          316 EAGTVA--PVIHKVFAFEDVADAHRLLEEGSHVGKVMLTV  353 (353)
T ss_dssp             HHTSSC--CCEEEEEEGGGHHHHHHHHHHTCCSSEEEEEC
T ss_pred             HCCCcc--CCcceEEeHHHHHHHHHHHHhCCCCceEEEeC
Confidence            999764  568899999999999999988875 6999875

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=100.00  E-value=1.2e-55  Score=401.06  Aligned_cols=329  Identities=25%  Similarity=0.348  Sum_probs=283.8

Q ss_pred             cceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCC--------CCCCCcccccceeEEEEEeCCC
Q 018529           11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ--------TPLFPRIFGHEAAGVVESVGEG   82 (354)
Q Consensus        11 ~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~--------~~~~p~~~G~e~~G~V~~vG~~   82 (354)
                      |||+++.+++.+++++++|.|+|+++||+|||.++|||++|++++.|..+        ...+|.++|||++|+|+++|++
T Consensus         1 Mka~~~~~~g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~   80 (347)
T 1jvb_A            1 MRAVRLVEIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDE   80 (347)
T ss_dssp             CEEEEECSTTSCCEEEECCCCCCCTTCEEEEEEEEEECTHHHHHTTTEETTEETTTTTCCCSCEECCCEEEEEEEEECTT
T ss_pred             CeEEEEecCCCCeEEEEeeCCCCCCCeEEEEEEEEEecHHHHHHhcCCCcccccccccCCCCCccccccceEEEEEECCC
Confidence            79999999987799999999999999999999999999999999887544        2467999999999999999999


Q ss_pred             CCCCCCCCEEEecccCCCCCCcccccCCCC-CCcc---cccccccceeeEEeec-cceEECCCCCCccchhhcccchhhh
Q 018529           83 VSDLEVGDHVLPVFTGECGDCRHCRFSING-EPVN---HFLGTSTFSEYTVVHS-GCVAKINPLAPLDKVCILSCGVSTG  157 (354)
Q Consensus        83 ~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~-~~~~---~~~~~g~~a~~~~v~~-~~~~~~P~~~~~~~aa~l~~~~~~a  157 (354)
                      +++|++||||++.+..+|++|++|+.+... |...   +....|+|+||+.+|+ +.++++ +++++++|+.+++++.||
T Consensus        81 v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~~~~~i-~~~~~~~aa~l~~~~~ta  159 (347)
T 1jvb_A           81 VVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYVIVPHYKYMYKL-RRLNAVEAAPLTCSGITT  159 (347)
T ss_dssp             CCSCCTTCEEEECCEECCSSSHHHHTTCGGGCSSCEEBTTTBCCSSBSEEEESCGGGEEEC-SSSCHHHHGGGGTHHHHH
T ss_pred             CCCCCCCCEEEeCCCCCCCCChhhhCcCcccCcccccccccCCCcceeEEEecCccceEEe-CCCCHHHcccchhhHHHH
Confidence            999999999999999999999999876532 2222   2234599999999999 999999 999999999999999999


Q ss_pred             hhhhhhhcCCCCCCeEEEEcC-ChhHHHHHHHHHHc-CCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHH
Q 018529          158 LGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIA-GASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEM  235 (354)
Q Consensus       158 ~~~l~~~~~~~~~~~vlI~G~-g~~G~~a~~~a~~~-g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~  235 (354)
                      |+++ +.+++++|++|||+|+ |++|++++|+|+.. |+ +|+++++++++.++++++|++.++++.+.+  +.+.+.++
T Consensus       160 ~~~l-~~~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga-~Vi~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~  235 (347)
T 1jvb_A          160 YRAV-RKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGA-TIIGVDVREEAVEAAKRAGADYVINASMQD--PLAEIRRI  235 (347)
T ss_dssp             HHHH-HHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCC-EEEEEESSHHHHHHHHHHTCSEEEETTTSC--HHHHHHHH
T ss_pred             HHHH-HhcCCCCCCEEEEECCCccHHHHHHHHHHHcCCC-eEEEEcCCHHHHHHHHHhCCCEEecCCCcc--HHHHHHHH
Confidence            9996 4589999999999998 59999999999999 99 899999999999999999999999887754  77778888


Q ss_pred             cC-CCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhh-hccccEEEEEeccCCCCCCCHHHHHHHH
Q 018529          236 TN-GGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNYKPRTDLPSVVDMY  313 (354)
Q Consensus       236 ~~-~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~~  313 (354)
                      +. +++|++||++|++..++.++++++++ |+++.+|......  .++... +.+++++.|++...   .++++++++++
T Consensus       236 ~~~~~~d~vi~~~g~~~~~~~~~~~l~~~-G~iv~~g~~~~~~--~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~l~  309 (347)
T 1jvb_A          236 TESKGVDAVIDLNNSEKTLSVYPKALAKQ-GKYVMVGLFGADL--HYHAPLITLSEIQFVGSLVGN---QSDFLGIMRLA  309 (347)
T ss_dssp             TTTSCEEEEEESCCCHHHHTTGGGGEEEE-EEEEECCSSCCCC--CCCHHHHHHHTCEEEECCSCC---HHHHHHHHHHH
T ss_pred             hcCCCceEEEECCCCHHHHHHHHHHHhcC-CEEEEECCCCCCC--CCCHHHHHhCceEEEEEeccC---HHHHHHHHHHH
Confidence            76 58999999999977899999999997 9999999765111  333333 34899999876432   35789999999


Q ss_pred             HccCCCCCCceeeeeccccHHHHHHHHhcCCc-eeEEEec
Q 018529          314 MNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM  352 (354)
Q Consensus       314 ~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~~  352 (354)
                      .+++++  +.++++|+|+++++||+.+.+++. +|+||.+
T Consensus       310 ~~g~l~--~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  347 (347)
T 1jvb_A          310 EAGKVK--PMITKTMKLEEANEAIDNLENFKAIGRQVLIP  347 (347)
T ss_dssp             HTTSSC--CCCEEEEEGGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             HcCCCC--ceEEEEEcHHHHHHHHHHHHCCCCcceEEecC
Confidence            999765  457899999999999999988875 7999864

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=5.5e-56  Score=410.73  Aligned_cols=335  Identities=23%  Similarity=0.288  Sum_probs=279.9

Q ss_pred             hcceeeeccCCCceEEEEeecCCCC-CCe------EEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCC
Q 018529           10 TCKAAVAWEAGKPLIIQDVEVAPPQ-AME------VRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEG   82 (354)
Q Consensus        10 ~~~a~~~~~~~~~l~~~~~~~p~~~-~~e------vlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~   82 (354)
                      ||||+++.+++. ++++++|.|+|+ ++|      |||||.++|||++|++++.|..+ ..+|.++|||++|+|+++|++
T Consensus         2 ~Mka~~~~~~~~-l~~~~~p~P~~~~~~e~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-~~~p~v~GhE~~G~V~~vG~~   79 (398)
T 1kol_A            2 GNRGVVYLGSGK-VEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTT-AQVGLVLGHEITGEVIEKGRD   79 (398)
T ss_dssp             CEEEEEEEETTE-EEEEEECCCCSBCTTSCBCSSCEEEEEEEEECCHHHHHHHTTCSC-CCTTCBCCCCEEEEEEEECTT
T ss_pred             ccEEEEEecCCc-eEEEEecCCCCCCCCcccccceEEEEEEEEeechhhHHHHcCCCC-CCCCcccCcccEEEEEEECCC
Confidence            699999998875 999999999996 898      99999999999999999987543 356899999999999999999


Q ss_pred             CCCCCCCCEEEecccCCCCCCcccccCCCCCCc-c---------cc----cccccceeeEEeecc--ceEECCCCCCccc
Q 018529           83 VSDLEVGDHVLPVFTGECGDCRHCRFSINGEPV-N---------HF----LGTSTFSEYTVVHSG--CVAKINPLAPLDK  146 (354)
Q Consensus        83 ~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~-~---------~~----~~~g~~a~~~~v~~~--~~~~~P~~~~~~~  146 (354)
                      +++|++||||++.+..+|+.|++|+.+....+. .         ++    ...|+|+||+++|++  .++++|+++++++
T Consensus        80 v~~~~vGDrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~~~~~~P~~~~~~~  159 (398)
T 1kol_A           80 VENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTGGQAEYVLVPYADFNLLKLPDRDKAME  159 (398)
T ss_dssp             CCSCCTTCEEECCSEECCSSSHHHHTTCGGGCSSSCSSSSCEEBTCTTSCCBCCCSBSEEEESSHHHHCEECSCHHHHHH
T ss_pred             CCcCCCCCEEEECCcCCCCCChHHhCcCcccCCCcccccccceeeeccCCCCCceeeeEEEecchhCeEEECCCCcchhh
Confidence            999999999999999999999999866533221 1         11    134899999999987  8999999999888


Q ss_pred             ----hhhcccchhhhhhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCC
Q 018529          147 ----VCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS  222 (354)
Q Consensus       147 ----aa~l~~~~~~a~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~  222 (354)
                          +++++++++|||+++ +.+++++|++|||+|+|++|++++|+|+.+|+++|++++++++|+++++++|++ ++++.
T Consensus       160 ~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~lGa~-~i~~~  237 (398)
T 1kol_A          160 KIRDLTCLSDILPTGYHGA-VTAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFE-IADLS  237 (398)
T ss_dssp             THHHHGGGGTHHHHHHHHH-HHTTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCE-EEETT
T ss_pred             hcccccccccHHHHHHHHH-HHcCCCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHcCCc-EEccC
Confidence                788999999999997 478999999999999999999999999999997899999999999999999997 77776


Q ss_pred             CCChhHHHHHHHHcCC-CccEEEEcccCh---------------HhHHHHHHHhhCCCceEEEEcCCCC-Cc--------
Q 018529          223 EHDRPIQEVIAEMTNG-GVDRSVECTGNI---------------DNMISAFECVHDGWGVAVLVGVPSK-DA--------  277 (354)
Q Consensus       223 ~~~~~~~~~i~~~~~~-~~dvv~d~~g~~---------------~~~~~~~~~l~~~~g~~v~~g~~~~-~~--------  277 (354)
                      +.+ .+.+.+++++++ ++|+|||++|+.               ..++.++++++++ |+++.+|.... ..        
T Consensus       238 ~~~-~~~~~v~~~t~g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~  315 (398)
T 1kol_A          238 LDT-PLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVA-GKIGIPGLYVTEDPGAVDAAAK  315 (398)
T ss_dssp             SSS-CHHHHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEE-EEEEECSCCCSCCTTCSSHHHH
T ss_pred             Ccc-hHHHHHHHHhCCCCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcC-CEEEEeccccCCcccccccccc
Confidence            532 377889888887 999999999985               2689999999997 99999987521 11        


Q ss_pred             --eeecchh-hhccccEEEEEeccCCCCCCCHHHHHHHHHccCCC-CCCceeeeeccccHHHHHHHHhcCCceeEEEecC
Q 018529          278 --VFMTKPI-NVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLE-LEKFITHRIPFSEINKAFEYMVKGEGLRCIISME  353 (354)
Q Consensus       278 --~~~~~~~-~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~l~~~~~a~~~~~~~~~~k~vi~~~  353 (354)
                        ...+... .+.+++++.++...   ..++++++++++.+|+++ +.+.++++|+|+|+++||+.+.+++.+|+||+++
T Consensus       316 ~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~l~~~g~l~~~~~~i~~~~~l~~~~~A~~~~~~~~~gKvvi~~~  392 (398)
T 1kol_A          316 IGSLSIRFGLGWAKSHSFHTGQTP---VMKYNRALMQAIMWDRINIAEVVGVQVISLDDAPRGYGEFDAGVPKKFVIDPH  392 (398)
T ss_dssp             TTCCCCCHHHHHHTTCEEEESSCC---HHHHHHHHHHHHHTTSCCHHHHHTEEEECGGGHHHHHHHHHHTCSCEEEECTT
T ss_pred             cccccccHHHHhhcccEEEecccC---hHHHHHHHHHHHHcCCCCCccceeEEEEcHHHHHHHHHHHhCCCceEEEEEeC
Confidence              1122222 23488888875321   123578899999999887 3456789999999999999998877799999874

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=100.00  E-value=2.7e-55  Score=397.73  Aligned_cols=314  Identities=23%  Similarity=0.263  Sum_probs=268.6

Q ss_pred             cccchhcceeeeccCCCc--eEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCC-CCCCcccccceeEEEEEeCC
Q 018529            5 AGLILTCKAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGE   81 (354)
Q Consensus         5 ~~~~~~~~a~~~~~~~~~--l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~   81 (354)
                      .++|.+|||+++.+++.+  +++.++|.|+|++|||+|||.++|||++|++++.|..+. ..+|.++|||++|+|+++|+
T Consensus        16 ~~~p~~MkA~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~vG~   95 (342)
T 4eye_A           16 TQGPGSMKAIQAQSLSGPEGLVYTDVETPGAGPNVVVVDVKAAGVCFPDYLMTKGEYQLKMEPPFVPGIETAGVVRSAPE   95 (342)
T ss_dssp             --CCCEEEEEEECSSSGGGGEEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHTTCSSSCCCSSBCCCSEEEEEEEECCT
T ss_pred             ccCCcceEEEEEecCCCCceeEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCCccceeEEEEEEEECC
Confidence            458999999999998776  999999999999999999999999999999999887643 46799999999999999999


Q ss_pred             CCCCCCCCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhh
Q 018529           82 GVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGAT  161 (354)
Q Consensus        82 ~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l  161 (354)
                      +++ |++||||++.                       ...|+|+||+.++++.++++|+++++++||+++++++|||+++
T Consensus        96 ~v~-~~vGDrV~~~-----------------------~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l  151 (342)
T 4eye_A           96 GSG-IKPGDRVMAF-----------------------NFIGGYAERVAVAPSNILPTPPQLDDAEAVALIANYHTMYFAY  151 (342)
T ss_dssp             TSS-CCTTCEEEEE-----------------------CSSCCSBSEEEECGGGEEECCTTSCHHHHHHHTTHHHHHHHHH
T ss_pred             CCC-CCCCCEEEEe-----------------------cCCCcceEEEEEcHHHeEECCCCCCHHHHHHhhhHHHHHHHHH
Confidence            999 9999999876                       2358999999999999999999999999999999999999998


Q ss_pred             hhhcCCCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC-C
Q 018529          162 LNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-G  239 (354)
Q Consensus       162 ~~~~~~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~  239 (354)
                      .+.+++++|++|||+|+ |++|++++|+|+..|+ +|++++++++++++++++|++.++++. .+  +.+.+++.+++ +
T Consensus       152 ~~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~ga~~v~~~~-~~--~~~~v~~~~~~~g  227 (342)
T 4eye_A          152 ARRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGA-KVIAVVNRTAATEFVKSVGADIVLPLE-EG--WAKAVREATGGAG  227 (342)
T ss_dssp             HTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHTCSEEEESS-TT--HHHHHHHHTTTSC
T ss_pred             HHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEEecCc-hh--HHHHHHHHhCCCC
Confidence            78899999999999998 9999999999999999 999999999999999999999999887 44  88999999988 9


Q ss_pred             ccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchh-hhccccEEEEEeccCCC--C----CCCHHHHHHH
Q 018529          240 VDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI-NVLNERTLKGTFFGNYK--P----RTDLPSVVDM  312 (354)
Q Consensus       240 ~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~-~~~~~~~i~g~~~~~~~--~----~~~~~~~~~~  312 (354)
                      +|+||||+|+ +.++.++++++++ |+++.+|..... ...+... .+.+++++.|++.+.+.  .    .+++++++++
T Consensus       228 ~Dvvid~~g~-~~~~~~~~~l~~~-G~iv~~G~~~~~-~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~l  304 (342)
T 4eye_A          228 VDMVVDPIGG-PAFDDAVRTLASE-GRLLVVGFAAGG-IPTIKVNRLLLRNASLIGVAWGEFLRTHADYLYETQAGLEKL  304 (342)
T ss_dssp             EEEEEESCC---CHHHHHHTEEEE-EEEEEC-----------CCCCGGGTTCEEEECCHHHHHHHCTTHHHHHHHHHHHH
T ss_pred             ceEEEECCch-hHHHHHHHhhcCC-CEEEEEEccCCC-CCccCHHHHhhcCCEEEEEehhhhhhcCHHHHHHHHHHHHHH
Confidence            9999999998 6899999999997 999999976532 1122222 24589999998764321  1    1347889999


Q ss_pred             HHccCCCCCCceeeeeccccHHHHHHHHhcCCc-eeEEEec
Q 018529          313 YMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM  352 (354)
Q Consensus       313 ~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~~  352 (354)
                      +.+|   +.+.++++|+|+++++||+.+.+++. +|+||+.
T Consensus       305 ~~~g---l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~P  342 (342)
T 4eye_A          305 VAEG---MRPPVSARIPLSEGRQALQDFADGKVYGKMVLVP  342 (342)
T ss_dssp             HHTT---CCCCEEEEEEGGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             HHcC---CCCCcceEEeHHHHHHHHHHHHhCCCCceEEEeC
Confidence            9999   45568899999999999999998886 6988863

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=100.00  E-value=2.6e-55  Score=397.81  Aligned_cols=317  Identities=21%  Similarity=0.249  Sum_probs=272.2

Q ss_pred             chhcceeeeccCCCc---eEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCC-CCCCcccccceeEEEEEeCCCC
Q 018529            8 ILTCKAAVAWEAGKP---LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGV   83 (354)
Q Consensus         8 ~~~~~a~~~~~~~~~---l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~~   83 (354)
                      +|+|||+++.+++++   +++++.|.|+|++|||+|||.++|||++|++.+.|..+. ..+|.++|||++|+|+++|+++
T Consensus         2 ~~~mka~~~~~~g~p~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~E~~G~V~~vG~~v   81 (340)
T 3gms_A            2 SLHGKLIQFHKFGNPKDVLQVEYKNIEPLKDNEVFVRMLVRPINPSDLIPITGAYAHRIPLPNIPGYEGVGIVENVGAFV   81 (340)
T ss_dssp             CCEEEEEEESSCSCHHHHEEEEEEECCCCCTTEEEEEEEEEECCHHHHGGGGTTTTTTSCSSBCCCSCCEEEEEEECTTS
T ss_pred             CcccEEEEEecCCCchheEEEEecCCCCCCCCEEEEEEEEecCCHHHHHHhcCCCCCCCCCCCcCCcceEEEEEEeCCCC
Confidence            468999999999987   999999999999999999999999999999999887654 4689999999999999999999


Q ss_pred             CCCCCCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhh
Q 018529           84 SDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLN  163 (354)
Q Consensus        84 ~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~  163 (354)
                      ++|++||||++.                       ...|+|+||+.+|++.++++|+++++++||++++.++|||+++.+
T Consensus        82 ~~~~vGdrV~~~-----------------------~~~G~~aey~~v~~~~~~~vP~~l~~~~aa~l~~~~~ta~~~~~~  138 (340)
T 3gms_A           82 SRELIGKRVLPL-----------------------RGEGTWQEYVKTSADFVVPIPDSIDDFTAAQMYINPLTAWVTCTE  138 (340)
T ss_dssp             CGGGTTCEEEEC-----------------------SSSCSSBSEEEEEGGGEEECCTTSCHHHHTTSSHHHHHHHHHHHT
T ss_pred             CCCCCCCEEEec-----------------------CCCccceeEEEcCHHHeEECCCCCCHHHHhhhcchHHHHHHHHHH
Confidence            999999999864                       246899999999999999999999999999999999999999888


Q ss_pred             hcCCCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC-Ccc
Q 018529          164 VAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVD  241 (354)
Q Consensus       164 ~~~~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~~d  241 (354)
                      .+++++|++|||+|+ |++|++++|+|+..|+ +|+++++++++.++++++|++.++++.+.+  +.+.+++++++ ++|
T Consensus       139 ~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~lga~~~~~~~~~~--~~~~~~~~~~~~g~D  215 (340)
T 3gms_A          139 TLNLQRNDVLLVNACGSAIGHLFAQLSQILNF-RLIAVTRNNKHTEELLRLGAAYVIDTSTAP--LYETVMELTNGIGAD  215 (340)
T ss_dssp             TSCCCTTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHHTCSEEEETTTSC--HHHHHHHHTTTSCEE
T ss_pred             hcccCCCCEEEEeCCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhCCCcEEEeCCccc--HHHHHHHHhCCCCCc
Confidence            999999999999998 6999999999999999 999999999999999999999999988765  88899999988 999


Q ss_pred             EEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhhccccEEEEEeccCCC-------CCCCHHHHHHHHH
Q 018529          242 RSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYK-------PRTDLPSVVDMYM  314 (354)
Q Consensus       242 vv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~-------~~~~~~~~~~~~~  314 (354)
                      +||||+|++ ....++++++++ |+++.+|..... ...+.......++.+..+++..+.       ..++++++++++.
T Consensus       216 vvid~~g~~-~~~~~~~~l~~~-G~iv~~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  292 (340)
T 3gms_A          216 AAIDSIGGP-DGNELAFSLRPN-GHFLTIGLLSGI-QVNWAEIVTKAKVHANIFHLRHWNDEVSPYKWQETFRHLIRLVE  292 (340)
T ss_dssp             EEEESSCHH-HHHHHHHTEEEE-EEEEECCCTTSC-CCCHHHHHHTSCCEEEECCHHHHHHHSCHHHHHHHHHHHHHHHH
T ss_pred             EEEECCCCh-hHHHHHHHhcCC-CEEEEEeecCCC-CCCHHHhhhcccceEEEEEehhhhhhcCHHHHHHHHHHHHHHHH
Confidence            999999984 455667999997 999999986532 222221111234555544332111       1246889999999


Q ss_pred             ccCCCCCCceeeeeccccHHHHHHHHhcCC-c-eeEEEecCC
Q 018529          315 NKQLELEKFITHRIPFSEINKAFEYMVKGE-G-LRCIISMED  354 (354)
Q Consensus       315 ~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~-~-~k~vi~~~d  354 (354)
                      +|++++.. ++++|+|+++++||+.+.+++ . +|+||++.|
T Consensus       293 ~g~l~~~~-i~~~~~l~~~~~A~~~~~~~~~~~GKvvl~~~~  333 (340)
T 3gms_A          293 NEQLRFMK-VHSTYELADVKAAVDVVQSAEKTKGKVFLTSYE  333 (340)
T ss_dssp             TTSSCCCC-EEEEEEGGGHHHHHHHHHCTTCCSSEEEEECC-
T ss_pred             cCCCcccc-ccEEEeHHHHHHHHHHHHhcCCCCCeEEEEEec
Confidence            99988765 789999999999999999887 4 799998764

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=100.00  E-value=3.8e-55  Score=400.17  Aligned_cols=330  Identities=21%  Similarity=0.354  Sum_probs=276.2

Q ss_pred             cchhcceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCC
Q 018529            7 LILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDL   86 (354)
Q Consensus         7 ~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~   86 (354)
                      .+|+|+++..++.++.+++.++|.|+|++|||+|||.++|||++|++++.|..+...+|.++|||++|+|+++|+++++|
T Consensus        13 ~~mk~~~~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G~V~~vG~~V~~~   92 (366)
T 1yqd_A           13 HPVKAFGWAARDQSGHLSPFNFSRRATGEEDVRFKVLYCGVCHSDLHSIKNDWGFSMYPLVPGHEIVGEVTEVGSKVKKV   92 (366)
T ss_dssp             SSEEEEEEEECSTTCCEEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHHTSSSCCCSSBCCCCCEEEEEEEECTTCCSC
T ss_pred             CCeeEEEEEEcCCCCCcEEEEccCCCCCCCeEEEEEEEEeechhhHHHHcCCCCCCCCCEecccceEEEEEEECCCCCcC
Confidence            46677777776666669999999999999999999999999999999998865545679999999999999999999999


Q ss_pred             CCCCEEEeccc-CCCCCCcccccCCCCCCcc-----------cccccccceeeEEeeccceEECCCCCCccchhhcccch
Q 018529           87 EVGDHVLPVFT-GECGDCRHCRFSINGEPVN-----------HFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGV  154 (354)
Q Consensus        87 ~~Gd~V~~~~~-~~~~~c~~c~~~~~~~~~~-----------~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~  154 (354)
                      ++||||++.+. .+|+.|.+|+.+....+..           +....|+|+||+.+|++.++++|+++++++||++++++
T Consensus        93 ~vGDrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~ls~~~aa~l~~~~  172 (366)
T 1yqd_A           93 NVGDKVGVGCLVGACHSCESCANDLENYCPKMILTYASIYHDGTITYGGYSNHMVANERYIIRFPDNMPLDGGAPLLCAG  172 (366)
T ss_dssp             CTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEESSSSBCTTSCBCCCSSBSEEEEEGGGCEECCTTSCTTTTGGGGTHH
T ss_pred             CCCCEEEEcCCcCCCCCChhhhCcCcccCCcccccccccccCCCcCCCccccEEEEchhhEEECCCCCCHHHhhhhhhhH
Confidence            99999987554 5899999997664322211           11246999999999999999999999999999999999


Q ss_pred             hhhhhhhhhhcCCC-CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH-hcCCceEEcCCCCChhHHHHH
Q 018529          155 STGLGATLNVAKPE-RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTDFVNTSEHDRPIQEVI  232 (354)
Q Consensus       155 ~~a~~~l~~~~~~~-~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~-~lg~~~v~~~~~~~~~~~~~i  232 (354)
                      .|||+++. ..+++ +|++|||+|+|++|++++|+|+.+|+ +|+++++++++++.++ ++|++.++++.+.     +.+
T Consensus       173 ~ta~~al~-~~~~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~lGa~~v~~~~~~-----~~~  245 (366)
T 1yqd_A          173 ITVYSPLK-YFGLDEPGKHIGIVGLGGLGHVAVKFAKAFGS-KVTVISTSPSKKEEALKNFGADSFLVSRDQ-----EQM  245 (366)
T ss_dssp             HHHHHHHH-HTTCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCGGGHHHHHHTSCCSEEEETTCH-----HHH
T ss_pred             HHHHHHHH-hcCcCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcCCceEEeccCH-----HHH
Confidence            99999964 56788 99999999999999999999999999 8999999999999877 8999999987652     345


Q ss_pred             HHHcCCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhh-hccccEEEEEeccCCCCCCCHHHHHH
Q 018529          233 AEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNYKPRTDLPSVVD  311 (354)
Q Consensus       233 ~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~  311 (354)
                      ++++ +++|+|||++|.+..++.++++++++ |+++.+|.....  ..+.... +.+++++.|++...   .+++.++++
T Consensus       246 ~~~~-~~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~g~~~~~--~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~  318 (366)
T 1yqd_A          246 QAAA-GTLDGIIDTVSAVHPLLPLFGLLKSH-GKLILVGAPEKP--LELPAFSLIAGRKIVAGSGIGG---MKETQEMID  318 (366)
T ss_dssp             HHTT-TCEEEEEECCSSCCCSHHHHHHEEEE-EEEEECCCCSSC--EEECHHHHHTTTCEEEECCSCC---HHHHHHHHH
T ss_pred             HHhh-CCCCEEEECCCcHHHHHHHHHHHhcC-CEEEEEccCCCC--CCcCHHHHHhCCcEEEEecCCC---HHHHHHHHH
Confidence            5555 37999999999866789999999997 999999986533  2333333 44889999876532   246899999


Q ss_pred             HHHccCCCCCCceeeeeccccHHHHHHHHhcCCc-eeEEEecC
Q 018529          312 MYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISME  353 (354)
Q Consensus       312 ~~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~~~  353 (354)
                      ++.++++++.  + ++|||+|+++||+.+.+++. +|+||.++
T Consensus       319 l~~~g~l~~~--~-~~~~l~~~~~A~~~~~~~~~~gKvvl~~~  358 (366)
T 1yqd_A          319 FAAKHNITAD--I-EVISTDYLNTAMERLAKNDVRYRFVIDVG  358 (366)
T ss_dssp             HHHHTTCCCC--E-EEECGGGHHHHHHHHHTTCCSSEEEECHH
T ss_pred             HHHcCCCCCc--e-EEEcHHHHHHHHHHHHcCCcceEEEEEcc
Confidence            9999988764  4 79999999999999988875 79999864

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=100.00  E-value=1.1e-54  Score=397.95  Aligned_cols=325  Identities=18%  Similarity=0.175  Sum_probs=269.5

Q ss_pred             ccchhcceeeeccCCCceEEE-EeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCC
Q 018529            6 GLILTCKAAVAWEAGKPLIIQ-DVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVS   84 (354)
Q Consensus         6 ~~~~~~~a~~~~~~~~~l~~~-~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   84 (354)
                      ++|.+|||+++.+++. ++++ ++|.|+|++|||||||.+++||++|++++.+.   ..+|.++|||++|+|+++|++++
T Consensus         7 ~~p~~mkA~v~~~~~~-l~~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~---~~~p~v~G~e~~G~V~~vG~~v~   82 (371)
T 3gqv_A            7 IPPPQQTALTVNDHDE-VTVWNAAPCPMLPRDQVYVRVEAVAINPSDTSMRGQF---ATPWAFLGTDYAGTVVAVGSDVT   82 (371)
T ss_dssp             CCCSCEEEEEECTTSC-EEEEEEECCCCCCTTSEEEEEEEEECCGGGGC--------CCTTSCCCSEEEEEEEEECTTCC
T ss_pred             CCchhceeEEEcCCCc-eEEeccCCCCCCCCCEEEEEEEEEEcCHHHHHHhhcC---CCCCccCccccEEEEEEeCCCCC
Confidence            4788999999999976 9998 99999999999999999999999999988652   34689999999999999999999


Q ss_pred             CCCCCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhh
Q 018529           85 DLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNV  164 (354)
Q Consensus        85 ~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~  164 (354)
                      +|++||||++.       |..|..+        ....|+|+||+.+|++.++++|+++++++|+++++++.|||+++.+.
T Consensus        83 ~~~~GdrV~~~-------~~~~~~~--------~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~~~~~~~ta~~~l~~~  147 (371)
T 3gqv_A           83 HIQVGDRVYGA-------QNEMCPR--------TPDQGAFSQYTVTRGRVWAKIPKGLSFEQAAALPAGISTAGLAMKLL  147 (371)
T ss_dssp             SCCTTCEEEEE-------CCTTCTT--------CTTCCSSBSEEECCTTCEEECCTTCCHHHHHTSHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEe-------ccCCCCC--------CCCCCcCcCeEEEchhheEECCCCCCHHHHhhhhhhHHHHHHHHHhh
Confidence            99999999765       4445322        23468999999999999999999999999999999999999998776


Q ss_pred             -cCC-----------CCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHH
Q 018529          165 -AKP-----------ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEV  231 (354)
Q Consensus       165 -~~~-----------~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~  231 (354)
                       .++           ++|++|||+|+ |++|++++|+|+.+|+ +|+++. +++|+++++++|+++++++.+.+  +.+.
T Consensus       148 ~~~~~~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~Ga-~Vi~~~-~~~~~~~~~~lGa~~vi~~~~~~--~~~~  223 (371)
T 3gqv_A          148 GLPLPSPSADQPPTHSKPVYVLVYGGSTATATVTMQMLRLSGY-IPIATC-SPHNFDLAKSRGAEEVFDYRAPN--LAQT  223 (371)
T ss_dssp             TCCCCCSSCSSCCCCSSCCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEE-CGGGHHHHHHTTCSEEEETTSTT--HHHH
T ss_pred             ccCCCCCccccccccCCCcEEEEECCCcHHHHHHHHHHHHCCC-EEEEEe-CHHHHHHHHHcCCcEEEECCCch--HHHH
Confidence             553           89999999998 9999999999999999 888885 78999999999999999998766  8899


Q ss_pred             HHHHcCCCccEEEEcccChHhHHHHHHHh-hCCCceEEEEcCCCCC------ceeecc--hhhhccccEEEEEeccCCCC
Q 018529          232 IAEMTNGGVDRSVECTGNIDNMISAFECV-HDGWGVAVLVGVPSKD------AVFMTK--PINVLNERTLKGTFFGNYKP  302 (354)
Q Consensus       232 i~~~~~~~~dvv~d~~g~~~~~~~~~~~l-~~~~g~~v~~g~~~~~------~~~~~~--~~~~~~~~~i~g~~~~~~~~  302 (354)
                      +++++++++|+|||++|++..++.+++++ +++ |+++.+|.....      ......  ...+.+++++.|++......
T Consensus       224 v~~~t~g~~d~v~d~~g~~~~~~~~~~~l~~~~-G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~g~~~~~~~~  302 (371)
T 3gqv_A          224 IRTYTKNNLRYALDCITNVESTTFCFAAIGRAG-GHYVSLNPFPEHAATRKMVTTDWTLGPTIFGEGSTWPAPYGRPGSE  302 (371)
T ss_dssp             HHHHTTTCCCEEEESSCSHHHHHHHHHHSCTTC-EEEEESSCCCC---CCSCEEEEECCGGGGGTSCBSCSTTTCBCCCH
T ss_pred             HHHHccCCccEEEECCCchHHHHHHHHHhhcCC-CEEEEEecCccccccccccceeeeeeeeeccccccccccccccccH
Confidence            99999888999999999988899999999 586 999999865421      111211  12234788887764332211


Q ss_pred             C------CCHHHHHHHHHccCCCCCCceeeeeccccHHHHHHHHhcCCc-e-eEEEecCC
Q 018529          303 R------TDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-L-RCIISMED  354 (354)
Q Consensus       303 ~------~~~~~~~~~~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~-~-k~vi~~~d  354 (354)
                      .      +.++++++++.+|++++.+.++++|+|+++++||+.+.+++. + |+|+.+.|
T Consensus       303 ~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~l~~~~~A~~~l~~g~~~Gkkvvv~~~~  362 (371)
T 3gqv_A          303 EERQFGEDLWRIAGQLVEDGRLVHHPLRVVQGGFDHIKQGMELVRKGELSGEKLVVRLEG  362 (371)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTSSCCCCEEEEEECHHHHHHHHHHHHTTCCSSCEEEEEECC
T ss_pred             HHHHHHHHHHHHHHHHHHCCeeeCCcCeecCCcHHHHHHHHHHHHcCCCceEEEEEEeCC
Confidence            0      123478899999999999888888999999999999998864 4 67777654

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=100.00  E-value=6.5e-55  Score=409.31  Aligned_cols=339  Identities=16%  Similarity=0.156  Sum_probs=281.7

Q ss_pred             ccchhcceeeeccCC-------------CceEEEEeecCCCCCCeEEEEEeeeecCccchhhhc-------------c--
Q 018529            6 GLILTCKAAVAWEAG-------------KPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWE-------------S--   57 (354)
Q Consensus         6 ~~~~~~~a~~~~~~~-------------~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~-------------~--   57 (354)
                      ++|.||||+++.+++             ++++++++|.|+|++|||+|||.++|||++|++...             +  
T Consensus        20 ~~p~tmkA~v~~~~~~~~~~~~~~~~~~~~l~~~e~p~P~~~~~eVlVrV~a~gic~sD~~~~~~~~~~~~~~~~~~~~~   99 (447)
T 4a0s_A           20 PVPDTYLALHLRAEDADMFKGVADKDVRKSLRLGEVPMPELAPDEVLVAVMASSINYNTVWSAMFEPIPTFHFLKQNARQ   99 (447)
T ss_dssp             CCCSEEEEEEEEGGGTTTTTTCSSCCHHHHCEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCSSCHHHHHHHHHTT
T ss_pred             CCChhheeeeeeccccccccccccCCCCCCceEEeccCCCCCCCeEEEEEEEEEECcHHhhhhccCcccchhhhhhhccc
Confidence            589999999999998             349999999999999999999999999999975421             1  


Q ss_pred             -CCC-CCCCC-cccccceeEEEEEeCCCCCCCCCCCEEEecccCCCCCCcccccCCCCCCcccccc----cccceeeEEe
Q 018529           58 -KGQ-TPLFP-RIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLG----TSTFSEYTVV  130 (354)
Q Consensus        58 -~~~-~~~~p-~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~----~g~~a~~~~v  130 (354)
                       ... ...+| .++|||++|+|+++|+++++|++||||++.+...|+.|+.|....+.|......+    .|+|+||+.+
T Consensus       100 g~~~~~~~~P~~v~GhE~~G~V~~vG~~V~~~~vGDrV~~~~~~~~~~~~~~~~~~~~c~~~~~~G~~~~~G~~aey~~v  179 (447)
T 4a0s_A          100 GGWATRHDQPYHVLGSDCSGVVVRTGIGVRRWKPGDHVIVHPAHVDEQEPATHGDGMLGTEQRAWGFETNFGGLAEYGVV  179 (447)
T ss_dssp             CGGGGGGCCSEEECCSCEEEEEEEECTTCCSCCTTCEEEECSEECCTTSGGGGTCTTCSTTCEETTTTSSSCSSBSEEEE
T ss_pred             CccccccCCCCcccccceeEEEEEECCCCCCCCCCCEEEEecCcCcCcccccccccccccccccccccCCCCceeeeeec
Confidence             111 12346 6999999999999999999999999999999999988887765444444333332    4999999999


Q ss_pred             eccceEECCCCCCccchhhcccchhhhhhhhhh--hcCCCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhH
Q 018529          131 HSGCVAKINPLAPLDKVCILSCGVSTGLGATLN--VAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRF  207 (354)
Q Consensus       131 ~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~--~~~~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~  207 (354)
                      |++.++++|+++++++||+++++++|||+++..  .+++++|++|||+|+ |++|++++|+|+..|+ +|++++++++++
T Consensus       180 ~~~~~~~iP~~ls~~~aA~l~~~~~tA~~al~~~~~~~~~~g~~VlV~GasG~iG~~a~qla~~~Ga-~vi~~~~~~~~~  258 (447)
T 4a0s_A          180 RASQLLPKPAHLTWEEAAVSPLCAGTAYRMLVSDRGAQMKQGDIVLIWGASGGLGSYAIQFVKNGGG-IPVAVVSSAQKE  258 (447)
T ss_dssp             EGGGEEECCTTSCHHHHHTSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSHHHH
T ss_pred             CHHHcEECCCCCCHHHHHHhHHHHHHHHHHHHhhhccCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHH
Confidence            999999999999999999999999999999764  489999999999998 9999999999999999 888888999999


Q ss_pred             HHHHhcCCceEEcCCCCC----------------hhHHHHHHHHcCCCccEEEEcccChHhHHHHHHHhhCCCceEEEEc
Q 018529          208 EEAKKFGVTDFVNTSEHD----------------RPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVG  271 (354)
Q Consensus       208 ~~~~~lg~~~v~~~~~~~----------------~~~~~~i~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g  271 (354)
                      ++++++|++.++++.+.+                ..+.+.+++.+++++|+|||++|+ ..++.++++++++ |+++.+|
T Consensus       259 ~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~g~Dvvid~~G~-~~~~~~~~~l~~~-G~iv~~G  336 (447)
T 4a0s_A          259 AAVRALGCDLVINRAELGITDDIADDPRRVVETGRKLAKLVVEKAGREPDIVFEHTGR-VTFGLSVIVARRG-GTVVTCG  336 (447)
T ss_dssp             HHHHHTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHHHHHHHHHHSSCCSEEEECSCH-HHHHHHHHHSCTT-CEEEESC
T ss_pred             HHHHhcCCCEEEecccccccccccccccccchhhhHHHHHHHHHhCCCceEEEECCCc-hHHHHHHHHHhcC-CEEEEEe
Confidence            999999999998765432                123677888884499999999998 6889999999997 9999999


Q ss_pred             CCCCCceeecchh-hhccccEEEEEeccCCCCCCCHHHHHHHHHccCCCCCCceeeeeccccHHHHHHHHhcCCc-eeEE
Q 018529          272 VPSKDAVFMTKPI-NVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCI  349 (354)
Q Consensus       272 ~~~~~~~~~~~~~-~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~v  349 (354)
                      ..... ...+... .+.+++++.|++....   +++.++++++.+|+++  +.++++|+|+++++||+.+.+++. +|+|
T Consensus       337 ~~~~~-~~~~~~~~~~~~~~~i~g~~~~~~---~~~~~~~~l~~~g~l~--~~i~~~~~l~~~~~A~~~~~~~~~~GKvv  410 (447)
T 4a0s_A          337 SSSGY-LHTFDNRYLWMKLKKIVGSHGANH---EEQQATNRLFESGAVV--PAMSAVYPLAEAAEACRVVQTSRQVGKVA  410 (447)
T ss_dssp             CTTCS-EEEEEHHHHHHTTCEEEECCSCCH---HHHHHHHHHHHTTSSC--CCEEEEEEGGGHHHHHHHHHTTCCSSEEE
T ss_pred             cCCCc-ccccCHHHHHhCCCEEEecCCCCH---HHHHHHHHHHHcCCcc--cceeEEEcHHHHHHHHHHHhcCCCceEEE
Confidence            76532 2233332 2458889999775432   4678999999999775  568899999999999999988775 6988


Q ss_pred             EecC
Q 018529          350 ISME  353 (354)
Q Consensus       350 i~~~  353 (354)
                      |.+.
T Consensus       411 v~~~  414 (447)
T 4a0s_A          411 VLCM  414 (447)
T ss_dssp             EESS
T ss_pred             EEeC
Confidence            8764

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=100.00  E-value=2.6e-54  Score=405.69  Aligned_cols=338  Identities=17%  Similarity=0.178  Sum_probs=277.6

Q ss_pred             ccchhcceeeeccC---------------CCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccC------------
Q 018529            6 GLILTCKAAVAWEA---------------GKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESK------------   58 (354)
Q Consensus         6 ~~~~~~~a~~~~~~---------------~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~------------   58 (354)
                      ++|.||||+++.++               +++++++++|.|+|++|||||||.++|||++|++...+.            
T Consensus        26 ~iP~tmkA~v~~~~~~~~~~~~~~~~~~~~~~l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~~~~~~~~~~~~~g  105 (456)
T 3krt_A           26 PLPESYRAITVHKDETEMFAGLETRDKDPRKSIHLDDVPVPELGPGEALVAVMASSVNYNSVHTSIFEPLSTFGFLERYG  105 (456)
T ss_dssp             CCCSCEEEEEEEGGGTTTTTTCCGGGCCHHHHCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTCSSCSHHHHHHHH
T ss_pred             CCCcceEEEEEeccccccccccccccCCCCCCcEEEEccCCCCCCCeEEEEEEEEEecchhhhhhhcCcccchhhhhhcc
Confidence            48899999999987               234999999999999999999999999999998664321            


Q ss_pred             -CC----CCCCC-cccccceeEEEEEeCCCCCCCCCCCEEEecccCCCCCCcccccCC-CCCCccccc----ccccceee
Q 018529           59 -GQ----TPLFP-RIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRFSI-NGEPVNHFL----GTSTFSEY  127 (354)
Q Consensus        59 -~~----~~~~p-~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~-~~~~~~~~~----~~g~~a~~  127 (354)
                       ..    ...+| .++|||++|+|+++|+++++|++||+|++.+. .|..|..|..+. +.|......    ..|+|+||
T Consensus       106 ~~~~~~~~~~~P~~v~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~-~c~~~~~~~~~~~~~c~~~~~~G~~~~~G~~aey  184 (456)
T 3krt_A          106 RVSDLAKRHDLPYHVIGSDLAGVVLRTGPGVNAWQAGDEVVAHCL-SVELESSDGHNDTMLDPEQRIWGFETNFGGLAEI  184 (456)
T ss_dssp             TSCHHHHTTCCSEEECCSCCEEEEEEECTTCCSCCTTCEEEECCE-ECCCCSGGGTTSGGGCTTCEETTTTSSSCSSBSE
T ss_pred             ccccccccCCCCcccccceeEEEEEEECCCCCCCCCCCEEEEeCC-cccccccccccccccCccccccccCCCCCcccce
Confidence             10    12456 69999999999999999999999999998533 455555554332 122222222    24999999


Q ss_pred             EEeeccceEECCCCCCccchhhcccchhhhhhhhhhh--cCCCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCCh
Q 018529          128 TVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNV--AKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS  204 (354)
Q Consensus       128 ~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~--~~~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~  204 (354)
                      +++|+++++++|+++++++||++++++.|||+++...  +++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++
T Consensus       185 ~~v~~~~~~~~P~~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~g~~VlV~GasG~vG~~avqlak~~Ga-~vi~~~~~~  263 (456)
T 3krt_A          185 ALVKSNQLMPKPDHLSWEEAAAPGLVNSTAYRQLVSRNGAGMKQGDNVLIWGASGGLGSYATQFALAGGA-NPICVVSSP  263 (456)
T ss_dssp             EEEEGGGEEECCTTSCHHHHHSSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSH
T ss_pred             EEechHHeeECCCCCCHHHHHHhhhHHHHHHHHHHhhcccCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-eEEEEECCH
Confidence            9999999999999999999999999999999997654  78999999999998 9999999999999999 888888999


Q ss_pred             hhHHHHHhcCCceEEcCCCCC---------------hhHHHHHHHHcCC-CccEEEEcccChHhHHHHHHHhhCCCceEE
Q 018529          205 KRFEEAKKFGVTDFVNTSEHD---------------RPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAV  268 (354)
Q Consensus       205 ~~~~~~~~lg~~~v~~~~~~~---------------~~~~~~i~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v  268 (354)
                      +|+++++++|++.++++.+.+               ..+.+.+++++++ ++|+|||++|+ +.+..++++++++ |+++
T Consensus       264 ~~~~~~~~lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~~~~i~~~t~g~g~Dvvid~~G~-~~~~~~~~~l~~~-G~iv  341 (456)
T 3krt_A          264 QKAEICRAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRIRELTGGEDIDIVFEHPGR-ETFGASVFVTRKG-GTIT  341 (456)
T ss_dssp             HHHHHHHHHTCCEEEETTTTTCCSEEETTEECHHHHHHHHHHHHHHHTSCCEEEEEECSCH-HHHHHHHHHEEEE-EEEE
T ss_pred             HHHHHHHhhCCcEEEecCcCcccccccccccchHHHHHHHHHHHHHhCCCCCcEEEEcCCc-hhHHHHHHHhhCC-cEEE
Confidence            999999999999999987754               1345788888887 99999999998 8999999999997 9999


Q ss_pred             EEcCCCCCceeecchh-hhccccEEEEEeccCCCCCCCHHHHHHHHHccCCCCCCceeeeeccccHHHHHHHHhcCCc-e
Q 018529          269 LVGVPSKDAVFMTKPI-NVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-L  346 (354)
Q Consensus       269 ~~g~~~~~~~~~~~~~-~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~-~  346 (354)
                      .+|..... ...+... .+.+++++.|++...+   +++.++++++.+|+++  +.++++|+|+++++||+.+.+++. +
T Consensus       342 ~~G~~~~~-~~~~~~~~~~~~~~~i~g~~~~~~---~~~~~~~~l~~~g~l~--~~i~~~~~l~~~~eA~~~l~~~~~~G  415 (456)
T 3krt_A          342 TCASTSGY-MHEYDNRYLWMSLKRIIGSHFANY---REAWEANRLIAKGRIH--PTLSKVYSLEDTGQAAYDVHRNLHQG  415 (456)
T ss_dssp             ESCCTTCS-EEEEEHHHHHHTTCEEEECCSCCH---HHHHHHHHHHHTTSSC--CCEEEEEEGGGHHHHHHHHHTTCSSS
T ss_pred             EEecCCCc-ccccCHHHHHhcCeEEEEeccCCH---HHHHHHHHHHHcCCcc--cceeEEEcHHHHHHHHHHHHhCCCCC
Confidence            99976532 2233332 2447889999875443   4577899999999775  468899999999999999988775 7


Q ss_pred             eEEEecC
Q 018529          347 RCIISME  353 (354)
Q Consensus       347 k~vi~~~  353 (354)
                      |+||.+.
T Consensus       416 Kvvv~~~  422 (456)
T 3krt_A          416 KVGVLCL  422 (456)
T ss_dssp             EEEEESS
T ss_pred             cEEEEeC
Confidence            9888764

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=100.00  E-value=1.9e-53  Score=386.42  Aligned_cols=314  Identities=18%  Similarity=0.154  Sum_probs=266.2

Q ss_pred             hhcceeeeccCC-----CceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCC
Q 018529            9 LTCKAAVAWEAG-----KPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGV   83 (354)
Q Consensus         9 ~~~~a~~~~~~~-----~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~   83 (354)
                      |||||+++.++|     +.+++.++|.|+|++|||+|||.+++||++|++.+.|.  ...+|.++|||++|+|+++|+++
T Consensus         1 m~MkA~~~~~~G~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~--~~~~p~i~G~e~~G~V~~vG~~v   78 (346)
T 3fbg_A            1 MSLKAIGFEQPFKLSDGNLFKTFNLDIPEPKVHEILVKIQSISVNPVDTKQRLMD--VSKAPRVLGFDAIGVVESVGNEV   78 (346)
T ss_dssp             -CEEEEEBSSCCCGGGCCCCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHTTSC--CSSSCBCCCCCEEEEEEEECTTC
T ss_pred             CCcEEEEEEeccccCCCceeEeccccCCCCCCCEEEEEEEEEEcCHHHHHHHhCC--CCCCCcCcCCccEEEEEEeCCCC
Confidence            689999999876     34999999999999999999999999999999988875  35679999999999999999999


Q ss_pred             CCCCCCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhh
Q 018529           84 SDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLN  163 (354)
Q Consensus        84 ~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~  163 (354)
                      ++|++||||++...                    ....|+|+||+.+|++.++++|+++++++||++++++.|||+++.+
T Consensus        79 ~~~~~GdrV~~~~~--------------------~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~  138 (346)
T 3fbg_A           79 TMFNQGDIVYYSGS--------------------PDQNGSNAEYQLINERLVAKAPKNISAEQAVSLPLTGITAYETLFD  138 (346)
T ss_dssp             CSCCTTCEEEECCC--------------------TTSCCSSBSEEEEEGGGEEECCSSSCHHHHTTSHHHHHHHHHHHHT
T ss_pred             CcCCCCCEEEEcCC--------------------CCCCcceeEEEEEChHHeEECCCCCCHHHhhhcchhHHHHHHHHHH
Confidence            99999999986521                    1235899999999999999999999999999999999999999888


Q ss_pred             hcCCC------CCCeEEEEc-CChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHc
Q 018529          164 VAKPE------RGSSVAVFG-LGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMT  236 (354)
Q Consensus       164 ~~~~~------~~~~vlI~G-~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~  236 (354)
                      .++++      +|++|||+| +|++|++++|+|+..|+ +|++++++++++++++++|+++++++.+ +  +.+.+++..
T Consensus       139 ~~~~~~~~~~~~g~~VlV~gg~G~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~vi~~~~-~--~~~~~~~~~  214 (346)
T 3fbg_A          139 VFGISRNRNENEGKTLLIINGAGGVGSIATQIAKAYGL-RVITTASRNETIEWTKKMGADIVLNHKE-S--LLNQFKTQG  214 (346)
T ss_dssp             TSCCCSSHHHHTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEECCSHHHHHHHHHHTCSEEECTTS-C--HHHHHHHHT
T ss_pred             hcCCccccccCCCCEEEEEcCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEEEECCc-c--HHHHHHHhC
Confidence            89998      999999995 59999999999999999 9999999999999999999999998875 3  888888884


Q ss_pred             CCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhhccccEEEEEeccCCC---C------CCCHH
Q 018529          237 NGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYK---P------RTDLP  307 (354)
Q Consensus       237 ~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~---~------~~~~~  307 (354)
                      ++++|+||||+|++..++.++++++++ |+++.++...  ...+... ...+++++.+++.....   .      .+.++
T Consensus       215 ~~g~Dvv~d~~g~~~~~~~~~~~l~~~-G~iv~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (346)
T 3fbg_A          215 IELVDYVFCTFNTDMYYDDMIQLVKPR-GHIATIVAFE--NDQDLNA-LKPKSLSFSHEFMFARPLNQTDDMIKHHEYLE  290 (346)
T ss_dssp             CCCEEEEEESSCHHHHHHHHHHHEEEE-EEEEESSCCS--SCBCGGG-GTTTTCEEEECCTTHHHHTTCTTTHHHHHHHH
T ss_pred             CCCccEEEECCCchHHHHHHHHHhccC-CEEEEECCCC--CCCcccc-ccccceEEEEEEEecccccchhhHHHHHHHHH
Confidence            449999999999877889999999997 9999887532  2222221 13478899886543211   0      13478


Q ss_pred             HHHHHHHccCCCCCCceeeee---ccccHHHHHHHHhcCCc-eeEEEecCC
Q 018529          308 SVVDMYMNKQLELEKFITHRI---PFSEINKAFEYMVKGEG-LRCIISMED  354 (354)
Q Consensus       308 ~~~~~~~~~~~~~~~~v~~~~---~l~~~~~a~~~~~~~~~-~k~vi~~~d  354 (354)
                      ++++++.+|++++  .++++|   +|+++++||+.+.+++. +|+||++++
T Consensus       291 ~~~~l~~~g~l~~--~i~~~~~~~~l~~~~~A~~~~~~g~~~GKvvl~~~~  339 (346)
T 3fbg_A          291 DITNKVEQNIYQP--TTTKVIEGLTTENIYQAHQILESNTMIGKLVINLNE  339 (346)
T ss_dssp             HHHHHHHTTSSCC--CEEEEEESCCHHHHHHHHHHHHTTCCCSEEEEEC--
T ss_pred             HHHHHHHCCCEEC--CccceecCCCHHHHHHHHHHHhcCCcceEEEEecCC
Confidence            8999999997654  477777   99999999999999885 799998863

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=100.00  E-value=1e-53  Score=387.58  Aligned_cols=317  Identities=21%  Similarity=0.254  Sum_probs=267.3

Q ss_pred             CCCccccchhcceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCC--CCCCcccccceeEEEEE
Q 018529            1 MSSTAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT--PLFPRIFGHEAAGVVES   78 (354)
Q Consensus         1 m~~~~~~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~--~~~p~~~G~e~~G~V~~   78 (354)
                      ||.   .|.+|||+++.++++++++.++|.|+|++|||||||.+++||++|++++.|..+.  ..+|.++|||++|+|++
T Consensus         1 Ms~---~~~~mka~~~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~P~v~G~E~~G~V~~   77 (343)
T 3gaz_A            1 MSL---TTPTMIAAVVEEANGPFVLRKLARPQPAPGQVLVQIEASGTNPLDAKIRAGEAPHAQQPLPAILGMDLAGTVVA   77 (343)
T ss_dssp             --------CEEEEEEECSTTCCEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCCGGGCCCSSBCCCCEEEEEEEE
T ss_pred             CCC---CchhheEEEEecCCCceEEEeccCCCCCCCEEEEEEEEEEeCHhhHHHhCCCCCCCCCCCCcccCcceEEEEEE
Confidence            665   5789999999999988999999999999999999999999999999998875432  56799999999999999


Q ss_pred             eCCCCCCCCCCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhh
Q 018529           79 VGEGVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGL  158 (354)
Q Consensus        79 vG~~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~  158 (354)
                      +|+++++|++||||++.....                  ....|+|+||+.+|++.++++|+++++++||++++++.|||
T Consensus        78 vG~~v~~~~vGdrV~~~~~g~------------------~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~  139 (343)
T 3gaz_A           78 VGPEVDSFRVGDAVFGLTGGV------------------GGLQGTHAQFAAVDARLLASKPAALTMRQASVLPLVFITAW  139 (343)
T ss_dssp             ECTTCCSCCTTCEEEEECCSS------------------TTCCCSSBSEEEEEGGGEEECCTTSCHHHHHTSHHHHHHHH
T ss_pred             ECCCCCCCCCCCEEEEEeCCC------------------CCCCcceeeEEEecHHHeeeCCCCCCHHHHHHhhhhHHHHH
Confidence            999999999999998752110                  01358999999999999999999999999999999999999


Q ss_pred             hhhhhhcCCCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcC
Q 018529          159 GATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTN  237 (354)
Q Consensus       159 ~~l~~~~~~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~  237 (354)
                      +++.+.+++++|++|||+|+ |++|++++|+|+..|+ +|+++ ++++++++++++|++. ++ .+.+  +.+.+++.++
T Consensus       140 ~~l~~~~~~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga-~Vi~~-~~~~~~~~~~~lGa~~-i~-~~~~--~~~~~~~~~~  213 (343)
T 3gaz_A          140 EGLVDRAQVQDGQTVLIQGGGGGVGHVAIQIALARGA-RVFAT-ARGSDLEYVRDLGATP-ID-ASRE--PEDYAAEHTA  213 (343)
T ss_dssp             HHHTTTTCCCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEE-ECHHHHHHHHHHTSEE-EE-TTSC--HHHHHHHHHT
T ss_pred             HHHHHhcCCCCCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEE-eCHHHHHHHHHcCCCE-ec-cCCC--HHHHHHHHhc
Confidence            99878999999999999995 9999999999999999 89999 8999999999999988 66 4443  8888999888


Q ss_pred             C-CccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhhccccEEEEEeccCC----C----CCCCHHH
Q 018529          238 G-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNY----K----PRTDLPS  308 (354)
Q Consensus       238 ~-~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~----~----~~~~~~~  308 (354)
                      + ++|+|||++|+ +.++.++++++++ |+++.+|...   ..+.. ..+.+++++.+++....    .    ..+++++
T Consensus       214 ~~g~D~vid~~g~-~~~~~~~~~l~~~-G~iv~~g~~~---~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  287 (343)
T 3gaz_A          214 GQGFDLVYDTLGG-PVLDASFSAVKRF-GHVVSCLGWG---THKLA-PLSFKQATYSGVFTLHTLLANEGLAHFGEMLRE  287 (343)
T ss_dssp             TSCEEEEEESSCT-HHHHHHHHHEEEE-EEEEESCCCS---CCCCH-HHHHTTCEEEECCTTHHHHHTCSHHHHHHHHHH
T ss_pred             CCCceEEEECCCc-HHHHHHHHHHhcC-CeEEEEcccC---ccccc-hhhhcCcEEEEEEeccchhcccchHHHHHHHHH
Confidence            7 99999999998 7899999999997 9999998754   11221 22458999998764211    0    1145889


Q ss_pred             HHHHHHccCCCCCCcee-eeeccccHHHHHHHHhcCCc-----eeEEEec
Q 018529          309 VVDMYMNKQLELEKFIT-HRIPFSEINKAFEYMVKGEG-----LRCIISM  352 (354)
Q Consensus       309 ~~~~~~~~~~~~~~~v~-~~~~l~~~~~a~~~~~~~~~-----~k~vi~~  352 (354)
                      +++++.+|++++  .++ ++|+|+++++||+.+.+++.     +|+|++.
T Consensus       288 ~~~l~~~g~l~~--~i~~~~~~l~~~~~A~~~~~~~~~~Gr~~GK~v~~~  335 (343)
T 3gaz_A          288 ADALVQTGKLAP--RLDPRTFSIAEIGSAYDAVLGRNDVPRQRGKIAITV  335 (343)
T ss_dssp             HHHHHHTTCCCC--CBCSCCEETTCHHHHHHHHHTCTTCCCCSSBCEEEC
T ss_pred             HHHHHHCCCccc--CccCcEecHHHHHHHHHHHHcCCCcccccceEEEEe
Confidence            999999997764  577 79999999999999988764     6888864

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=100.00  E-value=2.7e-53  Score=382.24  Aligned_cols=312  Identities=22%  Similarity=0.272  Sum_probs=271.1

Q ss_pred             cceeeeccCCCc--eEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCCC
Q 018529           11 CKAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEV   88 (354)
Q Consensus        11 ~~a~~~~~~~~~--l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~   88 (354)
                      |||+++++++.+  +++.+.|.|+|++|||+|||.++|||++|++++.|..+...+|.++|||++|+|+++|+++++|++
T Consensus         2 MkA~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~vG~~v~~~~~   81 (325)
T 3jyn_A            2 AKRIQFSTVGGPEVLEYVDFEPEAPGPQAVVVRNKAIGLNFIDTYYRSGLYPAPFLPSGLGAEGAGVVEAVGDEVTRFKV   81 (325)
T ss_dssp             EEEEEBSSCSSGGGCEEEEECCCCCCTTEEEEEEEEEECCHHHHHHHHTSSCCSSSSBCCCCCEEEEEEEECTTCCSCCT
T ss_pred             cEEEEEecCCCcceeEEeecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCCCCCCCCCCceeEEEEEEECCCCCCCCC
Confidence            899999998887  999999999999999999999999999999999987766678999999999999999999999999


Q ss_pred             CCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhcCCC
Q 018529           89 GDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPE  168 (354)
Q Consensus        89 Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~~~~  168 (354)
                      ||||++..                      ...|+|+||+.+|++.++++|+++++++||++++.+.|+|+++.+.++++
T Consensus        82 GdrV~~~~----------------------~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~  139 (325)
T 3jyn_A           82 GDRVAYGT----------------------GPLGAYSEVHVLPEANLVKLADSVSFEQAAALMLKGLTVQYLLRQTYQVK  139 (325)
T ss_dssp             TCEEEESS----------------------SSSCCSBSEEEEEGGGEEECCTTSCHHHHHHHHHHHHHHHHHHHTTSCCC
T ss_pred             CCEEEEec----------------------CCCccccceEEecHHHeEECCCCCCHHHHhhhhhhHHHHHHHHHHhcCCC
Confidence            99998652                      23589999999999999999999999999999999999999988889999


Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC-CccEEEEc
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVEC  246 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~~dvv~d~  246 (354)
                      +|++|||+|+ |++|++++|+|+..|+ +|++++++++++++++++|++.++++.+.+  +.+.+++.+++ ++|+|||+
T Consensus       140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~--~~~~~~~~~~~~g~Dvvid~  216 (325)
T 3jyn_A          140 PGEIILFHAAAGGVGSLACQWAKALGA-KLIGTVSSPEKAAHAKALGAWETIDYSHED--VAKRVLELTDGKKCPVVYDG  216 (325)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHTCSEEEETTTSC--HHHHHHHHTTTCCEEEEEES
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCEEEeCCCcc--HHHHHHHHhCCCCceEEEEC
Confidence            9999999995 9999999999999999 999999999999999999999999988766  88999999987 99999999


Q ss_pred             ccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhhc-c-ccEEEEEeccCCC-CCCCH----HHHHHHHHccCCC
Q 018529          247 TGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-N-ERTLKGTFFGNYK-PRTDL----PSVVDMYMNKQLE  319 (354)
Q Consensus       247 ~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~-~-~~~i~g~~~~~~~-~~~~~----~~~~~~~~~~~~~  319 (354)
                      +|+ +.++.++++++++ |+++.+|...... ..+....+. + .+++.+..++.+. .++++    +++++++.+|+++
T Consensus       217 ~g~-~~~~~~~~~l~~~-G~iv~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~  293 (325)
T 3jyn_A          217 VGQ-DTWLTSLDSVAPR-GLVVSFGNASGPV-SGVNLGILAQKDSVYVTRPTLGSYANNAQNLQTMADELFDMLASGKLK  293 (325)
T ss_dssp             SCG-GGHHHHHTTEEEE-EEEEECCCTTCCC-CSCCTHHHHHTTSCEEECCCHHHHSCSTTHHHHHHHHHHHHHHTTSSC
T ss_pred             CCh-HHHHHHHHHhcCC-CEEEEEecCCCCC-CCCCHHHHhhcCcEEEEeeeeeeecCCHHHHHHHHHHHHHHHHCCCee
Confidence            998 7899999999997 9999999865332 123332232 4 5666654433222 22333    4789999999887


Q ss_pred             CCCceeeeeccccHHHHHHHHhcCCc-eeEEEec
Q 018529          320 LEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM  352 (354)
Q Consensus       320 ~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~~  352 (354)
                      +.  ++++|+|+++++||+.+.+++. +|+||.+
T Consensus       294 ~~--i~~~~~l~~~~~A~~~~~~~~~~Gkvvl~p  325 (325)
T 3jyn_A          294 VD--GIEQYALKDAAKAQIELSARRTTGSTILIP  325 (325)
T ss_dssp             CC--CCEEEEGGGHHHHHHHHHTTCCCSCEEEEC
T ss_pred             Cc--cccEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence            76  6899999999999999998876 6888863

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}

Probab=100.00  E-value=7.3e-54  Score=389.58  Aligned_cols=315  Identities=22%  Similarity=0.301  Sum_probs=261.4

Q ss_pred             chhcceeeeccCCCc--eEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCC-CCCCcccccceeEEEEEeCCCCC
Q 018529            8 ILTCKAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVS   84 (354)
Q Consensus         8 ~~~~~a~~~~~~~~~--l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~~~   84 (354)
                      +|+|||+++++++.+  +++.+.|.|+|++|||+|||.+++||++|++.+.|..+. ..+|.++|||++|+|+++|++++
T Consensus         1 sm~mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~e~~G~V~~vG~~v~   80 (349)
T 4a27_A            1 SMEMRAVVLAGFGGLNKLRLFRKAMPEPQDGELKIRVKACGLNFIDLMVRQGNIDNPPKTPLVPGFECSGIVEALGDSVK   80 (349)
T ss_dssp             CCCEEEEEECSSSSGGGEEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSEEEEEEEEECTTCC
T ss_pred             CceeEEEEEccCCCcceeEEEecCCCCCCCCEEEEEEEEEecCHHHHHHhCCCcCCCCCCCccccceeEEEEEEeCCCCC
Confidence            478999999999864  999999999999999999999999999999999887643 56799999999999999999999


Q ss_pred             CCCCCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhh
Q 018529           85 DLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNV  164 (354)
Q Consensus        85 ~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~  164 (354)
                      +|++||||++..                       ..|+|+||+.+|++.++++|+++++++||+++++++|||+++.+.
T Consensus        81 ~~~~GdrV~~~~-----------------------~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~  137 (349)
T 4a27_A           81 GYEIGDRVMAFV-----------------------NYNAWAEVVCTPVEFVYKIPDDMSFSEAAAFPMNFVTAYVMLFEV  137 (349)
T ss_dssp             SCCTTCEEEEEC-----------------------SSCCSBSEEEEEGGGEEECCTTSCHHHHHTSHHHHHHHHHHHHTT
T ss_pred             CCCCCCEEEEec-----------------------CCCcceEEEEecHHHeEECCCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence            999999998762                       458999999999999999999999999999999999999998888


Q ss_pred             cCCCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEE
Q 018529          165 AKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRS  243 (354)
Q Consensus       165 ~~~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv  243 (354)
                      +++++|++|||+|+ |++|++++|+|+.+|..+|++++ ++++.++++ +|++++++ .+.+  +.+.+++++++++|+|
T Consensus       138 ~~~~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~-~ga~~~~~-~~~~--~~~~~~~~~~~g~Dvv  212 (349)
T 4a27_A          138 ANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK-DSVTHLFD-RNAD--YVQEVKRISAEGVDIV  212 (349)
T ss_dssp             SCCCTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG-GGSSEEEE-TTSC--HHHHHHHHCTTCEEEE
T ss_pred             cCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH-cCCcEEEc-CCcc--HHHHHHHhcCCCceEE
Confidence            99999999999998 99999999999999654888886 667888888 99999998 5444  8889999887799999


Q ss_pred             EEcccChHhHHHHHHHhhCCCceEEEEcCCCCCce---------------eecchhh-hccccEEEEEeccCCCC-----
Q 018529          244 VECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAV---------------FMTKPIN-VLNERTLKGTFFGNYKP-----  302 (354)
Q Consensus       244 ~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~---------------~~~~~~~-~~~~~~i~g~~~~~~~~-----  302 (354)
                      |||+|+ +.++.++++++++ |+++.+|.......               ....... +.+++++.|+....+..     
T Consensus       213 ~d~~g~-~~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~g~~~~~~~~~~~~~  290 (349)
T 4a27_A          213 LDCLCG-DNTGKGLSLLKPL-GTYILYGSSNMVTGETKSFFSFAKSWWQVEKVNPIKLYEENKVIAGFSLLNLLFKQGRA  290 (349)
T ss_dssp             EEECC--------CTTEEEE-EEEEEEC-------------------------CHHHHHHHTCEEEEECHHHHHHTSCCH
T ss_pred             EECCCc-hhHHHHHHHhhcC-CEEEEECCCcccccccccccccccccccccccCHHHHhhcCceEEEEeehheeccccch
Confidence            999998 4568999999997 99999997531110               1122222 33788999987633211     


Q ss_pred             ---CCCHHHHHHHHHccCCCCCCceeeeeccccHHHHHHHHhcCCc-eeEEEecCC
Q 018529          303 ---RTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISMED  354 (354)
Q Consensus       303 ---~~~~~~~~~~~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~~~d  354 (354)
                         +++++++++++.+|+++  +.++++|+|+++++||+.+.+++. +|+||++++
T Consensus       291 ~~~~~~~~~~~~l~~~g~l~--~~i~~~~~l~~~~~A~~~l~~~~~~GKvvi~~~~  344 (349)
T 4a27_A          291 GLIRGVVEKLIGLYNQKKIK--PVVDSLWALEEVKEAMQRIHDRGNIGKLILDVEK  344 (349)
T ss_dssp             HHHHHHHHHHHHHHHTTSCC--CCEEEEECGGGHHHHHHHHHTTCCSSEEEEETTC
T ss_pred             HHHHHHHHHHHHHHHCCCcc--ccccceECHHHHHHHHHHHHhCCCCceEEEecCC
Confidence               34688999999999774  568899999999999999988776 699999864

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=100.00  E-value=1.9e-53  Score=388.33  Aligned_cols=315  Identities=17%  Similarity=0.183  Sum_probs=267.7

Q ss_pred             cchhcceeeeccC---CCc--eEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCC
Q 018529            7 LILTCKAAVAWEA---GKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGE   81 (354)
Q Consensus         7 ~~~~~~a~~~~~~---~~~--l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~   81 (354)
                      .+|+|||+++.++   +.+  +++.++|.|+|++|||+|||.++|||++|++++.|..+...+|.++|||++|+|+++|+
T Consensus        19 ~m~~MkA~~~~~~~~~~~~~~l~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~v~G~E~~G~V~~vG~   98 (363)
T 4dvj_A           19 YFQSMKAVGYNKPAPITDDASLLDIELPKPAPAGHDILVEVKAVSVNPVDYKVRRSTPPDGTDWKVIGYDAAGIVSAVGP   98 (363)
T ss_dssp             CCCEEEEEEBSSCCCTTSTTSSEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHHCCC--CCSBCCCCCEEEEEEEECT
T ss_pred             hhheeEEEEEeccCCCCCCceEEEeecCCCCCCCCEEEEEEEEEEeCHHHHHHHcCCCCCCCCCCcccceeEEEEEEeCC
Confidence            5678999999876   333  99999999999999999999999999999999998776667899999999999999999


Q ss_pred             CCCCCCCCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhh
Q 018529           82 GVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGAT  161 (354)
Q Consensus        82 ~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l  161 (354)
                      ++++|++||||++...                    ....|+|+||+.+|++.++++|+++++++||+++++++|||+++
T Consensus        99 ~v~~~~vGdrV~~~~~--------------------~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al  158 (363)
T 4dvj_A           99 DVTLFRPGDEVFYAGS--------------------IIRPGTNAEFHLVDERIVGRKPKTLDWAEAAALPLTSITAWEAF  158 (363)
T ss_dssp             TCCSCCTTCEEEECCC--------------------TTSCCSCBSEEEEEGGGCEECCTTSCHHHHHTSHHHHHHHHHHH
T ss_pred             CCCCCCCCCEEEEccC--------------------CCCCccceEEEEeCHHHeeECCCCCCHHHHHhhhhHHHHHHHHH
Confidence            9999999999986521                    12458999999999999999999999999999999999999998


Q ss_pred             hhhcCCC-----CCCeEEEEc-CChhHHHHHHHHHHc-CCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHH
Q 018529          162 LNVAKPE-----RGSSVAVFG-LGAVGLAAAEGARIA-GASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAE  234 (354)
Q Consensus       162 ~~~~~~~-----~~~~vlI~G-~g~~G~~a~~~a~~~-g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~  234 (354)
                      .+.++++     +|++|||+| +|++|++++|+|+.+ |+ +|++++++++|+++++++|+++++++.+ +  +.+.+++
T Consensus       159 ~~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qlak~~~g~-~Vi~~~~~~~~~~~~~~lGad~vi~~~~-~--~~~~v~~  234 (363)
T 4dvj_A          159 FDRLDVNKPVPGAAPAILIVGGAGGVGSIAVQIARQRTDL-TVIATASRPETQEWVKSLGAHHVIDHSK-P--LAAEVAA  234 (363)
T ss_dssp             HTTSCTTSCCTTSEEEEEEESTTSHHHHHHHHHHHHHCCS-EEEEECSSHHHHHHHHHTTCSEEECTTS-C--HHHHHHT
T ss_pred             HHhhCcCcCcCCCCCEEEEECCCCHHHHHHHHHHHHhcCC-EEEEEeCCHHHHHHHHHcCCCEEEeCCC-C--HHHHHHH
Confidence            8888988     899999998 599999999999985 77 9999999999999999999999999865 3  8888888


Q ss_pred             HcCCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhh-hccccEEEEEeccCC-----CC----CC
Q 018529          235 MTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNY-----KP----RT  304 (354)
Q Consensus       235 ~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~-----~~----~~  304 (354)
                      +.++++|+||||+|++..++.++++++++ |+++.+|...   .  +.... ..+++++.+++....     .+    .+
T Consensus       235 ~~~~g~Dvvid~~g~~~~~~~~~~~l~~~-G~iv~~g~~~---~--~~~~~~~~k~~~i~~~~~~~~~~~~~~~~~~~~~  308 (363)
T 4dvj_A          235 LGLGAPAFVFSTTHTDKHAAEIADLIAPQ-GRFCLIDDPS---A--FDIMLFKRKAVSIHHELMFTRPMFGTPDMSEQGR  308 (363)
T ss_dssp             TCSCCEEEEEECSCHHHHHHHHHHHSCTT-CEEEECSCCS---S--CCGGGGTTTTCEEEECCTTHHHHHTCTTTHHHHH
T ss_pred             hcCCCceEEEECCCchhhHHHHHHHhcCC-CEEEEECCCC---c--cchHHHhhccceEEEEEeeccccccCcchhhHHH
Confidence            85459999999999877899999999997 9999996432   2  22222 347889988654321     01    13


Q ss_pred             CHHHHHHHHHccCCCCCCceeeee---ccccHHHHHHHHhcCCc-eeEEEecC
Q 018529          305 DLPSVVDMYMNKQLELEKFITHRI---PFSEINKAFEYMVKGEG-LRCIISME  353 (354)
Q Consensus       305 ~~~~~~~~~~~~~~~~~~~v~~~~---~l~~~~~a~~~~~~~~~-~k~vi~~~  353 (354)
                      .++++++++.+|++++  .+++++   +++++++||+.+.+++. +|+||++.
T Consensus       309 ~~~~~~~l~~~g~l~~--~i~~~~~~~~l~~~~~A~~~~~~~~~~GKvVl~~~  359 (363)
T 4dvj_A          309 LLNDVSRLVDEGRLRT--TLTNRLSPINAANLKQAHALVESGTARGKVVIEGF  359 (363)
T ss_dssp             HHHHHHHHHHHTSSCC--CEEEEECSCSHHHHHHHHHHHHHTCCCSEEEEECS
T ss_pred             HHHHHHHHHHCCCeec--cccceecCCCHHHHHHHHHHHHhCCCceEEEEeCc
Confidence            4788999999997765  356655   99999999999998886 69999875

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=100.00  E-value=2.6e-53  Score=386.55  Aligned_cols=321  Identities=21%  Similarity=0.305  Sum_probs=268.9

Q ss_pred             cccchhcceeeeccCCCc--eEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCC-CCCCcccccceeEEEEEeCC
Q 018529            5 AGLILTCKAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGE   81 (354)
Q Consensus         5 ~~~~~~~~a~~~~~~~~~--l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~   81 (354)
                      ...|.+|||+++.+++.+  +++.++|.|+|+++||+|||.++|||++|++.+.|..+. ..+|.++|||++|+|+++|+
T Consensus        17 ~~~~~~Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~p~v~G~E~~G~V~~vG~   96 (354)
T 2j8z_A           17 NLYFQSMLAVHFDKPGGPENLYVKEVAKPSPGEGEVLLKVAASALNRADLMQRQGQYDPPPGASNILGLEASGHVAELGP   96 (354)
T ss_dssp             ----CEEEEEEESSCSSGGGEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTSSCCCTTSCSSSCSEEEEEEEEECS
T ss_pred             ccchhheeEEEEccCCCccceEEeecCCCCCCCCeEEEEEEEeecCHHHHHHhCCCCCCCCCCCcccceeeEEEEEEECC
Confidence            458889999999998864  899999999999999999999999999999998886543 24689999999999999999


Q ss_pred             CC-CCCCCCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhh
Q 018529           82 GV-SDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGA  160 (354)
Q Consensus        82 ~~-~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~  160 (354)
                      ++ ++|++||||++.                       ...|+|+||+.+|++.++++|+++++++||+++++++|||++
T Consensus        97 ~v~~~~~vGdrV~~~-----------------------~~~G~~aey~~v~~~~~~~iP~~ls~~~aa~l~~~~~tA~~a  153 (354)
T 2j8z_A           97 GCQGHWKIGDTAMAL-----------------------LPGGGQAQYVTVPEGLLMPIPEGLTLTQAAAIPEAWLTAFQL  153 (354)
T ss_dssp             CC--CCCTTCEEEEE-----------------------CSSCCSBSEEEEEGGGEEECCTTCCHHHHTTSHHHHHHHHHH
T ss_pred             CcCCCCCCCCEEEEe-----------------------cCCCcceeEEEeCHHHcEECCCCCCHHHHHhccchHHHHHHH
Confidence            99 999999999875                       134899999999999999999999999999999999999999


Q ss_pred             hhhhcCCCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC-
Q 018529          161 TLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-  238 (354)
Q Consensus       161 l~~~~~~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-  238 (354)
                      +.+.+++++|++|||+|+ |++|++++|+|+..|+ +|+++++++++.+.++++|++.++++.+.+  +.+.+.+.+.+ 
T Consensus       154 l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~  230 (354)
T 2j8z_A          154 LHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGA-IPLVTAGSQKKLQMAEKLGAAAGFNYKKED--FSEATLKFTKGA  230 (354)
T ss_dssp             HTTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTCSEEEETTTSC--HHHHHHHHTTTS
T ss_pred             HHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEecCChH--HHHHHHHHhcCC
Confidence            878899999999999985 9999999999999999 899999999999999999999999887765  88888888876 


Q ss_pred             CccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecch-hh-hccccEEEEEeccCCCCCC------C-HHHH
Q 018529          239 GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP-IN-VLNERTLKGTFFGNYKPRT------D-LPSV  309 (354)
Q Consensus       239 ~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~-~~-~~~~~~i~g~~~~~~~~~~------~-~~~~  309 (354)
                      ++|++||++|+ ..++.++++++++ |+++.+|..... ...+.. .. +.+++++.|++........      + ++++
T Consensus       231 ~~d~vi~~~G~-~~~~~~~~~l~~~-G~iv~~G~~~~~-~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~  307 (354)
T 2j8z_A          231 GVNLILDCIGG-SYWEKNVNCLALD-GRWVLYGLMGGG-DINGPLFSKLLFKRGSLITSLLRSRDNKYKQMLVNAFTEQI  307 (354)
T ss_dssp             CEEEEEESSCG-GGHHHHHHHEEEE-EEEEECCCTTCS-CCCSCHHHHHHHTTCEEEECCSTTCCHHHHHHHHHHHHHHT
T ss_pred             CceEEEECCCc-hHHHHHHHhccCC-CEEEEEeccCCC-ccCCChhHHHHhCCCEEEEEEcccccccccHHHHHHHHHHH
Confidence            89999999998 5888999999997 999999976532 223333 22 3489999998654321100      1 2357


Q ss_pred             HHHHHcc-CCCCCCceeeeeccccHHHHHHHHhcCCc-eeEEEecCC
Q 018529          310 VDMYMNK-QLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISMED  354 (354)
Q Consensus       310 ~~~~~~~-~~~~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~~~d  354 (354)
                      ++++.+| ++.+.+.++++|+|+++++||+.+.+++. +|+||.+++
T Consensus       308 ~~l~~~g~~~~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~~  354 (354)
T 2j8z_A          308 LPHFSTEGPQRLLPVLDRIYPVTEIQEAHKYMEANKNIGKIVLELPQ  354 (354)
T ss_dssp             GGGGTC---CCCCCCEEEEEEGGGHHHHHHHHHTTCCSSEEEEECCC
T ss_pred             HHHHHcCCCccccCccceEEcHHHHHHHHHHHHhCCCCceEEEecCC
Confidence            7888888 45556678999999999999999988764 799998764

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=100.00  E-value=1.4e-54  Score=396.84  Aligned_cols=326  Identities=18%  Similarity=0.204  Sum_probs=270.7

Q ss_pred             cceeeeccCCCceEEEEeecCCCCC-CeEEEEEeeeecCccchhhhcc--CCCCCCC---CcccccceeEEEEEeCCCCC
Q 018529           11 CKAAVAWEAGKPLIIQDVEVAPPQA-MEVRIKIKYTSLCRTDLYFWES--KGQTPLF---PRIFGHEAAGVVESVGEGVS   84 (354)
Q Consensus        11 ~~a~~~~~~~~~l~~~~~~~p~~~~-~evlV~v~~~~i~~~D~~~~~~--~~~~~~~---p~~~G~e~~G~V~~vG~~~~   84 (354)
                      |||+++.+++++++++++|.|+|++ +||+|||.++|||++|++++.|  ..+...+   |.++|||++|+|++  ++ +
T Consensus         1 MkA~~~~~~g~~l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~p~v~G~E~~G~V~~--~~-~   77 (366)
T 2cdc_A            1 MKAIIVKPPNAGVQVKDVDEKKLDSYGKIKIRTIYNGICGADREIVNGKLTLSTLPKGKDFLVLGHEAIGVVEE--SY-H   77 (366)
T ss_dssp             CEEEEECTTSCCCEEEECCGGGSCCCSSEEEEEEEEEECHHHHHHHTTCC-------CCSCEECCSEEEEEECS--CC-S
T ss_pred             CeEEEEeCCCCceEEEECcCCCCCCCCEEEEEEEEEeeccccHHHHcCCCCCCCCCcCCCCCcCCcceEEEEEe--CC-C
Confidence            7999999988779999999999999 9999999999999999999987  4443355   89999999999999  67 8


Q ss_pred             CCCCCCEEEecccCCCCCCcccccCCCC-CCccc-----cc-ccccceeeEEeeccceEECCCCCCccchhhcccchhhh
Q 018529           85 DLEVGDHVLPVFTGECGDCRHCRFSING-EPVNH-----FL-GTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTG  157 (354)
Q Consensus        85 ~~~~Gd~V~~~~~~~~~~c~~c~~~~~~-~~~~~-----~~-~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a  157 (354)
                      +|++||||++.+..+|++|.+|+.+... |....     .. ..|+|+||+++|++.++++|++++ ++|+ ++.+++||
T Consensus        78 ~~~~GDrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~l~-~~Aa-l~~~~~ta  155 (366)
T 2cdc_A           78 GFSQGDLVMPVNRRGCGICRNCLVGRPDFCETGEFGEAGIHKMDGFMREWWYDDPKYLVKIPKSIE-DIGI-LAQPLADI  155 (366)
T ss_dssp             SCCTTCEEEECSEECCSSSHHHHTTCGGGCSSSCCEEETTBEECCSCBSEEEECGGGEEEECGGGT-TTGG-GHHHHHHH
T ss_pred             CCCCCCEEEEcCCCCCCCChhhhCcCcccCCCCCcccCCccCCCCceeEEEEechHHeEECcCCcc-hhhh-hcCcHHHH
Confidence            8999999999999999999999876533 22222     22 469999999999999999999999 7765 66799999


Q ss_pred             hhhhh--h--hcCCC--C-------CCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCCh---hhHHHHHhcCCceEEcC
Q 018529          158 LGATL--N--VAKPE--R-------GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS---KRFEEAKKFGVTDFVNT  221 (354)
Q Consensus       158 ~~~l~--~--~~~~~--~-------~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~---~~~~~~~~lg~~~v~~~  221 (354)
                      |+++.  +  .++++  +       |++|||+|+|++|++++|+|+.+|+ +|+++++++   ++.++++++|++.+ + 
T Consensus       156 ~~al~~~~~~~~~~~~~~~~~~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~~~~ga~~v-~-  232 (366)
T 2cdc_A          156 EKSIEEILEVQKRVPVWTCDDGTLNCRKVLVVGTGPIGVLFTLLFRTYGL-EVWMANRREPTEVEQTVIEETKTNYY-N-  232 (366)
T ss_dssp             HHHHHHHHHHGGGSSCCSCTTSSSTTCEEEEESCHHHHHHHHHHHHHHTC-EEEEEESSCCCHHHHHHHHHHTCEEE-E-
T ss_pred             HHHHHhhhhcccCccccccccccCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCccchHHHHHHHHhCCcee-c-
Confidence            99976  4  78888  8       9999999999999999999999999 999999998   99999999999888 7 


Q ss_pred             CCCChhHHHHHHHHcCCCccEEEEcccChHhH-HHHHHHhhCCCceEEEEcCCCCCceeecchhh----hccccEEEEEe
Q 018529          222 SEHDRPIQEVIAEMTNGGVDRSVECTGNIDNM-ISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN----VLNERTLKGTF  296 (354)
Q Consensus       222 ~~~~~~~~~~i~~~~~~~~dvv~d~~g~~~~~-~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~----~~~~~~i~g~~  296 (354)
                      .+ +  +.+.+++ +.+++|+|||++|.+..+ +.++++++++ |+++.+|..... ...+....    +.+++++.|++
T Consensus       233 ~~-~--~~~~~~~-~~~~~d~vid~~g~~~~~~~~~~~~l~~~-G~iv~~g~~~~~-~~~~~~~~~~~~~~~~~~i~g~~  306 (366)
T 2cdc_A          233 SS-N--GYDKLKD-SVGKFDVIIDATGADVNILGNVIPLLGRN-GVLGLFGFSTSG-SVPLDYKTLQEIVHTNKTIIGLV  306 (366)
T ss_dssp             CT-T--CSHHHHH-HHCCEEEEEECCCCCTHHHHHHGGGEEEE-EEEEECSCCCSC-EEEEEHHHHHHHHHTTCEEEECC
T ss_pred             hH-H--HHHHHHH-hCCCCCEEEECCCChHHHHHHHHHHHhcC-CEEEEEecCCCC-ccccChhhhHHHHhcCcEEEEec
Confidence            54 3  5566666 446899999999986678 9999999997 999999986543 23333332    45899999876


Q ss_pred             ccCCCCCCCHHHHHHHHHccCCC----CCCceeeeeccccHHHHHHH--HhcCCceeEEEecC
Q 018529          297 FGNYKPRTDLPSVVDMYMNKQLE----LEKFITHRIPFSEINKAFEY--MVKGEGLRCIISME  353 (354)
Q Consensus       297 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~v~~~~~l~~~~~a~~~--~~~~~~~k~vi~~~  353 (354)
                      ..   ..++++++++++.+|+++    +.++++++|+|+++++||+.  +.++..+|+||+++
T Consensus       307 ~~---~~~~~~~~~~l~~~g~i~~~~~~~~~i~~~~~l~~~~~A~~~l~~~~~~~gKvvi~~~  366 (366)
T 2cdc_A          307 NG---QKPHFQQAVVHLASWKTLYPKAAKMLITKTVSINDEKELLKVLREKEHGEIKIRILWE  366 (366)
T ss_dssp             CC---CHHHHHHHHHHHHHHHHHSHHHHTTSEEEEEETTCHHHHHHHHHCCCTTCCEEEEECC
T ss_pred             CC---CHHHHHHHHHHHHcCCCCcccchhhcEEEEEcHHHHHHHHHHHhhhcCCceEEEEecC
Confidence            43   235789999999999876    77888999999999999998  55444579999864

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=100.00  E-value=1.9e-54  Score=388.19  Aligned_cols=303  Identities=14%  Similarity=0.155  Sum_probs=246.0

Q ss_pred             hhcceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCCC
Q 018529            9 LTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEV   88 (354)
Q Consensus         9 ~~~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~   88 (354)
                      +||||+++.+..+.+++.+.|.|+|++|||+|||.++|||++|++++.|..+...+|.++|||++|+|+++|+++++|++
T Consensus         3 ~tMka~~~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~v   82 (315)
T 3goh_A            3 EQHQVWAYQTKTHSVTLNSVDIPALAADDILVQNQAIGINPVDWKFIKANPINWSNGHVPGVDGAGVIVKVGAKVDSKML   82 (315)
T ss_dssp             CEEEEEEEETTTTEEEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHHHCTTCCCTTCCCCSEEEEEEEEECTTSCGGGT
T ss_pred             cceEEEEEeCCCCeeEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHcCCCCcCCCCCEeeeeeEEEEEEeCCCCCCCCC
Confidence            47999999953334999999999999999999999999999999999987766678999999999999999999999999


Q ss_pred             CCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhcCCC
Q 018529           89 GDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPE  168 (354)
Q Consensus        89 Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~~~~  168 (354)
                      ||||++.+..                    ...|+|+||+.+|++.++++|+++++++||+++++++|||+++ +.++++
T Consensus        83 GdrV~~~~~~--------------------~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al-~~~~~~  141 (315)
T 3goh_A           83 GRRVAYHTSL--------------------KRHGSFAEFTVLNTDRVMTLPDNLSFERAAALPCPLLTAWQAF-EKIPLT  141 (315)
T ss_dssp             TCEEEEECCT--------------------TSCCSSBSEEEEETTSEEECCTTSCHHHHHTSHHHHHHHHHHH-TTSCCC
T ss_pred             CCEEEEeCCC--------------------CCCcccccEEEEcHHHhccCcCCCCHHHHhhCccHHHHHHHHH-hhcCCC
Confidence            9999976421                    2368999999999999999999999999999999999999998 889999


Q ss_pred             CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEccc
Q 018529          169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  248 (354)
Q Consensus       169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g  248 (354)
                      +|++|||+|+|++|++++|+|+.+|+ +|++++ +++|+++++++|++++++  +     .+.+    ++++|+||||+|
T Consensus       142 ~g~~VlV~GaG~vG~~a~qlak~~Ga-~Vi~~~-~~~~~~~~~~lGa~~v~~--d-----~~~v----~~g~Dvv~d~~g  208 (315)
T 3goh_A          142 KQREVLIVGFGAVNNLLTQMLNNAGY-VVDLVS-ASLSQALAAKRGVRHLYR--E-----PSQV----TQKYFAIFDAVN  208 (315)
T ss_dssp             SCCEEEEECCSHHHHHHHHHHHHHTC-EEEEEC-SSCCHHHHHHHTEEEEES--S-----GGGC----CSCEEEEECC--
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEE-ChhhHHHHHHcCCCEEEc--C-----HHHh----CCCccEEEECCC
Confidence            99999999999999999999999999 999998 999999999999999884  1     1222    449999999999


Q ss_pred             ChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhhccccEEEEEeccCC---CC-------CCCHHHHHHHHHccCC
Q 018529          249 NIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNY---KP-------RTDLPSVVDMYMNKQL  318 (354)
Q Consensus       249 ~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~---~~-------~~~~~~~~~~~~~~~~  318 (354)
                      + +.+..++++++++ |+++.++.........    .+.+++.+....+...   ..       ++.++++++++.+|++
T Consensus       209 ~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l  282 (315)
T 3goh_A          209 S-QNAAALVPSLKAN-GHIICIQDRIPAPIDP----AFTRTISYHEIALGALHDFGDRQDWQILMQQGEALLTLIAQGKM  282 (315)
T ss_dssp             ------TTGGGEEEE-EEEEEECCC--------------CCSEEEEECGGGHHHHCCHHHHHHHHHHHHHHHHHHHTTSS
T ss_pred             c-hhHHHHHHHhcCC-CEEEEEeCCCCccccc----hhhhcceeeEEEeecccccCChhHHHHHHHHHHHHHHHHHCCCc
Confidence            8 4558899999997 9999997543221111    1223444444333211   01       1236789999999976


Q ss_pred             CCCCceeeeeccccHHHHHHHHhcCCceeEEEecCC
Q 018529          319 ELEKFITHRIPFSEINKAFEYMVKGEGLRCIISMED  354 (354)
Q Consensus       319 ~~~~~v~~~~~l~~~~~a~~~~~~~~~~k~vi~~~d  354 (354)
                      +  +.++++|||+++++||+.+. +..+|+||+++|
T Consensus       283 ~--~~i~~~~~l~~~~~A~~~~~-~~~gKvvi~~~~  315 (315)
T 3goh_A          283 E--IAAPDIFRFEQMIEALDHSE-QTKLKTVLTLNE  315 (315)
T ss_dssp             C--CCCCEEEEGGGHHHHHHHHH-HHCCCEEEESCC
T ss_pred             c--cccceEecHHHHHHHHHHHH-hcCCcEEEEecC
Confidence            5  56889999999999999998 556899999876

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=100.00  E-value=2.3e-54  Score=392.97  Aligned_cols=321  Identities=14%  Similarity=0.168  Sum_probs=263.5

Q ss_pred             CCCccccchhcceeeec--cC---CCceEEEEe---------ecCCCCCCeEEEEEeeeecCccchhhhccCCCC-CCCC
Q 018529            1 MSSTAGLILTCKAAVAW--EA---GKPLIIQDV---------EVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFP   65 (354)
Q Consensus         1 m~~~~~~~~~~~a~~~~--~~---~~~l~~~~~---------~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~-~~~p   65 (354)
                      ||+. ++|.+|||+++.  ++   .+.+++.++         |.|+|++|||+|||.++|||++|++++.|..+. ..+|
T Consensus         2 Ms~m-~~p~~mka~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~p   80 (349)
T 3pi7_A            2 MSPM-TIPSEMKALLLVGDGYTKTPSGSALEAMEPYLEQGRIAVPAPGPSQVLIKVNLASINPSDVAFIKGQYGQPRVKG   80 (349)
T ss_dssp             ---C-CCCSEEEEEEECSCBSCSSCCCSCCCCSTTTEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCSSSCBCTT
T ss_pred             CCCC-CCchhheEEEEEccccCCCcccceEEEeecccccccCCCCCCCCCeEEEEEEEecCCHHHHHHhcccCCCCCCCC
Confidence            5552 478899999999  33   233777788         999999999999999999999999999886543 4679


Q ss_pred             cccccceeEEEEEeCCCC-CCCCCCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCc
Q 018529           66 RIFGHEAAGVVESVGEGV-SDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPL  144 (354)
Q Consensus        66 ~~~G~e~~G~V~~vG~~~-~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~  144 (354)
                      .++|||++|+|+++|+++ ++|++||||++...                    ....|+|+||+.+|++.++++|+++++
T Consensus        81 ~v~G~E~~G~V~~vG~~v~~~~~vGdrV~~~~g--------------------~~~~G~~aey~~v~~~~~~~iP~~~~~  140 (349)
T 3pi7_A           81 RPAGFEGVGTIVAGGDEPYAKSLVGKRVAFATG--------------------LSNWGSWAEYAVAEAAACIPLLDTVRD  140 (349)
T ss_dssp             SBCCSEEEEEEEEECSSHHHHHHTTCEEEEECT--------------------TSSCCSSBSEEEEEGGGEEECCTTCCC
T ss_pred             CCccceEEEEEEEECCCccCCCCCCCEEEEecc--------------------CCCCccceeeEeechHHeEECCCCCCH
Confidence            999999999999999999 99999999997631                    224689999999999999999999999


Q ss_pred             cchhhcccchhhhhhhhhhhcCCCCC-CeEEEEc-CChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCC
Q 018529          145 DKVCILSCGVSTGLGATLNVAKPERG-SSVAVFG-LGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS  222 (354)
Q Consensus       145 ~~aa~l~~~~~~a~~~l~~~~~~~~~-~~vlI~G-~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~  222 (354)
                      ++||++++.++|||++ .+.++ +++ ++|||+| +|++|++++|+|+..|+ +|++++++++++++++++|++.++++.
T Consensus       141 ~~aa~l~~~~~ta~~~-~~~~~-~~g~~~vli~gg~g~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~~Ga~~~~~~~  217 (349)
T 3pi7_A          141 EDGAAMIVNPLTAIAM-FDIVK-QEGEKAFVMTAGASQLCKLIIGLAKEEGF-RPIVTVRRDEQIALLKDIGAAHVLNEK  217 (349)
T ss_dssp             --GGGSSHHHHHHHHH-HHHHH-HHCCSEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESCGGGHHHHHHHTCSEEEETT
T ss_pred             HHHhhccccHHHHHHH-HHHHh-hCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCEEEECC
Confidence            9999999999999965 56666 677 6888885 59999999999999999 999999999999999999999999988


Q ss_pred             CCChhHHHHHHHHcCC-CccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecch-h-hhccccEEEEEeccC
Q 018529          223 EHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP-I-NVLNERTLKGTFFGN  299 (354)
Q Consensus       223 ~~~~~~~~~i~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~-~-~~~~~~~i~g~~~~~  299 (354)
                      +.+  +.+.+++++++ ++|+||||+|+ ..++.++++++++ |+++.+|..... ...+.. . .+.+++++.|++...
T Consensus       218 ~~~--~~~~v~~~~~~~g~D~vid~~g~-~~~~~~~~~l~~~-G~iv~~G~~~~~-~~~~~~~~~~~~~~~~i~g~~~~~  292 (349)
T 3pi7_A          218 APD--FEATLREVMKAEQPRIFLDAVTG-PLASAIFNAMPKR-ARWIIYGRLDPD-ATVIREPGQLIFQHKHIEGFWLSE  292 (349)
T ss_dssp             STT--HHHHHHHHHHHHCCCEEEESSCH-HHHHHHHHHSCTT-CEEEECCCSCCS-CCCCSCTHHHHHSCCEEEECCHHH
T ss_pred             cHH--HHHHHHHHhcCCCCcEEEECCCC-hhHHHHHhhhcCC-CEEEEEeccCCC-CCCCCchhhhhccccEEEEEEehh
Confidence            765  88999998887 99999999998 5568999999997 999999976532 222333 2 345899999987654


Q ss_pred             CCC------CCCHHHHHHHHHccCCCCCCceeeeeccccHHHHHHHHhcCCceeEEEec
Q 018529          300 YKP------RTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISM  352 (354)
Q Consensus       300 ~~~------~~~~~~~~~~~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~~k~vi~~  352 (354)
                      +..      .++++++++++.+|+++  +.++++|+|+++++||+.+.++..+|+||++
T Consensus       293 ~~~~~~~~~~~~~~~~~~l~~~g~l~--~~i~~~~~l~~~~~A~~~~~~~~~gKvvl~p  349 (349)
T 3pi7_A          293 WMRQFKERRGPAILEAQKRFSDGRWS--TDVTAVVPLAEAIAWVPAELTKPNGKVFIRP  349 (349)
T ss_dssp             HHHHTHHHHHHHHHHC-CTTTTSSCC--C-CCEEEEHHHHHHHHHHHHTSSSSCEEEEC
T ss_pred             hhhhCcHHHHHHHHHHHHHHHcCCcc--cccceEEcHHHHHHHHHHHhCCCCceEEEeC
Confidence            211      23577788888999774  4588999999999999966666668999874

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=100.00  E-value=6.1e-53  Score=379.29  Aligned_cols=310  Identities=20%  Similarity=0.237  Sum_probs=260.2

Q ss_pred             cchhcceeeeccCCCc--eEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCC-----CCCCCCcccccceeEEEEEe
Q 018529            7 LILTCKAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKG-----QTPLFPRIFGHEAAGVVESV   79 (354)
Q Consensus         7 ~~~~~~a~~~~~~~~~--l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~-----~~~~~p~~~G~e~~G~V~~v   79 (354)
                      .+++|||+++.+++++  +++++.|.|+|++|||||||.++|||++|++++.|..     ....+|.++|||++|+|+++
T Consensus         3 ~m~~Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~p~v~G~E~~G~V~~v   82 (321)
T 3tqh_A            3 AMKEMKAIQFDQFGPPKVLKLVDTPTPEYRKNQMLIKVHAASLNPIDYKTRNGSGFVAKKLKNNLPSGLGYDFSGEVIEL   82 (321)
T ss_dssp             --CEEEEEEESSSCSGGGEEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHTTCSHHHHHHTTSCSBCCCCEEEEEEEEE
T ss_pred             ccccceEEEEccCCCcceeEEEecCCCCCCCCEEEEEEEEEEcCHHHHHHhcCCccccccccCCCCCcccceeEEEEEEe
Confidence            3568999999998887  9999999999999999999999999999999988732     23467999999999999999


Q ss_pred             CCCCCCCCCCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhh
Q 018529           80 GEGVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLG  159 (354)
Q Consensus        80 G~~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~  159 (354)
                      |+++++|++||||++.+..+                   ...|+|+||+.+|++.++++|+++++++||+++++++|||+
T Consensus        83 G~~v~~~~~GdrV~~~~~~~-------------------~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~  143 (321)
T 3tqh_A           83 GSDVNNVNIGDKVMGIAGFP-------------------DHPCCYAEYVCASPDTIIQKLEKLSFLQAASLPTAGLTALQ  143 (321)
T ss_dssp             CTTCCSCCTTCEEEEECSTT-------------------TCCCCSBSEEEECGGGEEECCTTSCHHHHHHSHHHHHHHHH
T ss_pred             CCCCCCCCCCCEEEEccCCC-------------------CCCCcceEEEEecHHHhccCCCCCCHHHHhhhhhHHHHHHH
Confidence            99999999999999875322                   13589999999999999999999999999999999999999


Q ss_pred             hhhhhcCCCCCCeEEEEc-CChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC
Q 018529          160 ATLNVAKPERGSSVAVFG-LGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG  238 (354)
Q Consensus       160 ~l~~~~~~~~~~~vlI~G-~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~  238 (354)
                      ++ +.+++++|++|||+| +|++|++++|+|+.+|+ +|++++ +++++++++++|+++++++.+.+ .+.+.+     +
T Consensus       144 al-~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga-~vi~~~-~~~~~~~~~~lGa~~~i~~~~~~-~~~~~~-----~  214 (321)
T 3tqh_A          144 AL-NQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGT-TVITTA-SKRNHAFLKALGAEQCINYHEED-FLLAIS-----T  214 (321)
T ss_dssp             HH-HHTTCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEE-CHHHHHHHHHHTCSEEEETTTSC-HHHHCC-----S
T ss_pred             HH-HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-EEEEEe-ccchHHHHHHcCCCEEEeCCCcc-hhhhhc-----c
Confidence            97 889999999999997 59999999999999999 888886 56678999999999999987754 122222     4


Q ss_pred             CccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhhccccEEEEEeccCCCCCCCHHHHHHHHHccCC
Q 018529          239 GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQL  318 (354)
Q Consensus       239 ~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~  318 (354)
                      ++|+||||+|++ ..+.++++++++ |+++.+|......   .......+++++.+++.  ....++++++++++.+|++
T Consensus       215 g~D~v~d~~g~~-~~~~~~~~l~~~-G~iv~~g~~~~~~---~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~g~l  287 (321)
T 3tqh_A          215 PVDAVIDLVGGD-VGIQSIDCLKET-GCIVSVPTITAGR---VIEVAKQKHRRAFGLLK--QFNIEELHYLGKLVSEDKL  287 (321)
T ss_dssp             CEEEEEESSCHH-HHHHHGGGEEEE-EEEEECCSTTHHH---HHHHHHHTTCEEECCCC--CCCHHHHHHHHHHHHTTSS
T ss_pred             CCCEEEECCCcH-HHHHHHHhccCC-CEEEEeCCCCchh---hhhhhhhcceEEEEEec--CCCHHHHHHHHHHHHCCCc
Confidence            799999999985 459999999997 9999998654211   11122347888887542  2233579999999999977


Q ss_pred             CCCCceeeeeccccHHHHHHHHhcCCc-eeEEEecC
Q 018529          319 ELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISME  353 (354)
Q Consensus       319 ~~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~~~  353 (354)
                      ++  .++++|+|+++++||+.+.+++. +|+||++.
T Consensus       288 ~~--~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~~  321 (321)
T 3tqh_A          288 RI--EISRIFQLSEAVTAHELLETGHVRGKLVFKVR  321 (321)
T ss_dssp             CC--CEEEEECGGGHHHHHHHHHTTCCCSEEEEECC
T ss_pred             cc--ccccEEcHHHHHHHHHHHHcCCCCceEEEEeC
Confidence            65  48899999999999999998875 69999874

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=8.2e-52  Score=375.85  Aligned_cols=313  Identities=23%  Similarity=0.330  Sum_probs=263.3

Q ss_pred             cchhcceeeeccCCCc--eEE-EEeecCCCCCCeEEEEEeeeecCccchhhhccCCCC-CCCCcccccceeEEEEEeCCC
Q 018529            7 LILTCKAAVAWEAGKP--LII-QDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEG   82 (354)
Q Consensus         7 ~~~~~~a~~~~~~~~~--l~~-~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~   82 (354)
                      .|.+|||+++.+++.+  +++ .+.|.|+|++|||+|||.++|||++|++++.|..+. ..+|.++|||++|+|+++|++
T Consensus        26 ~~~~Mka~~~~~~g~~~~l~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~P~v~G~E~~G~V~~vG~~  105 (351)
T 1yb5_A           26 GQKLMRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIEAVGDN  105 (351)
T ss_dssp             --CEEEEEEESSCSSGGGEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCSSCCCCSSBCCCSCEEEEEEEECTT
T ss_pred             CcceEEEEEEccCCCcceeEEeeecCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCcCCceeEEEEEEECCC
Confidence            5667999999988764  888 899999999999999999999999999998876532 457999999999999999999


Q ss_pred             CCCCCCCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhh
Q 018529           83 VSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATL  162 (354)
Q Consensus        83 ~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~  162 (354)
                      +++|++||||++.+.                      ..|+|+||+.+|++.++++|+++++++||+++++++|||+++.
T Consensus       106 v~~~~vGdrV~~~~~----------------------~~G~~aey~~v~~~~~~~~P~~l~~~~aA~l~~~~~ta~~al~  163 (351)
T 1yb5_A          106 ASAFKKGDRVFTSST----------------------ISGGYAEYALAADHTVYKLPEKLDFKQGAAIGIPYFTAYRALI  163 (351)
T ss_dssp             CTTCCTTCEEEESCC----------------------SSCSSBSEEEEEGGGEEECCTTSCHHHHTTTHHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEeCC----------------------CCCcceeEEEECHHHeEECCCCCCHHHHHhhhhHHHHHHHHHH
Confidence            999999999987521                      2489999999999999999999999999999999999999987


Q ss_pred             hhcCCCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC-Cc
Q 018529          163 NVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GV  240 (354)
Q Consensus       163 ~~~~~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~~  240 (354)
                      +.+++++|++|||+|+ |++|++++|+|+..|+ +|+++++++++.++++++|++.++++.+.+  +.+.+.+.+++ ++
T Consensus       164 ~~~~~~~g~~vlV~GasggiG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~ga~~~~d~~~~~--~~~~~~~~~~~~~~  240 (351)
T 1yb5_A          164 HSACVKAGESVLVHGASGGVGLAACQIARAYGL-KILGTAGTEEGQKIVLQNGAHEVFNHREVN--YIDKIKKYVGEKGI  240 (351)
T ss_dssp             TTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSEEEETTSTT--HHHHHHHHHCTTCE
T ss_pred             HhhCCCCcCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHcCCCEEEeCCCch--HHHHHHHHcCCCCc
Confidence            7899999999999997 9999999999999999 899999999999999999999999887654  88888888877 89


Q ss_pred             cEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchh-hhccccEEEEEeccCCCCCCCHH----HHHHHHHc
Q 018529          241 DRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI-NVLNERTLKGTFFGNYKPRTDLP----SVVDMYMN  315 (354)
Q Consensus       241 dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~-~~~~~~~i~g~~~~~~~~~~~~~----~~~~~~~~  315 (354)
                      |++||++|+ ..+..++++++++ |+++.+|... ..  .+... .+.+++++.|+++.... .++++    .+.+++.+
T Consensus       241 D~vi~~~G~-~~~~~~~~~l~~~-G~iv~~g~~~-~~--~~~~~~~~~~~~~i~g~~~~~~~-~~~~~~~~~~l~~~~~~  314 (351)
T 1yb5_A          241 DIIIEMLAN-VNLSKDLSLLSHG-GRVIVVGSRG-TI--EINPRDTMAKESSIIGVTLFSST-KEEFQQYAAALQAGMEI  314 (351)
T ss_dssp             EEEEESCHH-HHHHHHHHHEEEE-EEEEECCCCS-CE--EECTHHHHTTTCEEEECCGGGCC-HHHHHHHHHHHHHHHHH
T ss_pred             EEEEECCCh-HHHHHHHHhccCC-CEEEEEecCC-CC--ccCHHHHHhCCcEEEEEEeecCC-HHHHHHHHHHHHHHHHC
Confidence            999999998 5788999999997 9999999642 22  22322 24588999998653221 12343    44556677


Q ss_pred             cCCCCCCceeeeeccccHHHHHHH-HhcCC-ceeEEEec
Q 018529          316 KQLELEKFITHRIPFSEINKAFEY-MVKGE-GLRCIISM  352 (354)
Q Consensus       316 ~~~~~~~~v~~~~~l~~~~~a~~~-~~~~~-~~k~vi~~  352 (354)
                      +++  .+.++++|+|+++++||+. +.+++ .+|+||.+
T Consensus       315 g~l--~~~i~~~~~l~~~~~A~~~~~~~~~~~gKvvi~~  351 (351)
T 1yb5_A          315 GWL--KPVIGSQYPLEKVAEAHENIIHGSGATGKMILLL  351 (351)
T ss_dssp             TCC--CCCEEEEEEGGGHHHHHHHHHHSSCCSSEEEEEC
T ss_pred             CCc--cCccceEEcHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence            755  4568899999999999998 56544 47999864

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=100.00  E-value=1.1e-52  Score=384.24  Aligned_cols=319  Identities=19%  Similarity=0.215  Sum_probs=263.4

Q ss_pred             chhcceeeeccCCCc---eEEEEeecCCCC--CCeEEEEEeeeecCccchhhhccCCCC-CCCC---------cccccce
Q 018529            8 ILTCKAAVAWEAGKP---LIIQDVEVAPPQ--AMEVRIKIKYTSLCRTDLYFWESKGQT-PLFP---------RIFGHEA   72 (354)
Q Consensus         8 ~~~~~a~~~~~~~~~---l~~~~~~~p~~~--~~evlV~v~~~~i~~~D~~~~~~~~~~-~~~p---------~~~G~e~   72 (354)
                      ||+|||+++.+++++   ++++++|.|+|+  +|||+|||.++|||++|++++.|..+. ..+|         .++|||+
T Consensus         1 ~~~mka~~~~~~g~~~~~l~~~~~~~P~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~P~~~~~~~p~~i~G~E~   80 (364)
T 1gu7_A            1 MITAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPCGNEG   80 (364)
T ss_dssp             CEEEEEEEESSCSCHHHHCEEEEEEECTTSCCTTEEEEEEEEEEECHHHHHHHHTCSSCCCCCBSTTCCSSCBEECCSCC
T ss_pred             CceEEEEEeccCCCchheeEEeeccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCCCCCCccccccCcccccCcee
Confidence            578999999999875   899999999887  999999999999999999999886543 2456         8999999


Q ss_pred             eEEEEEeCCCCCCCCCCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCC-----------C
Q 018529           73 AGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINP-----------L  141 (354)
Q Consensus        73 ~G~V~~vG~~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~-----------~  141 (354)
                      +|+|+++|+++++|++||||++.+                      ...|+|+||+++|++.++++|+           +
T Consensus        81 ~G~V~~vG~~v~~~~vGdrV~~~~----------------------~~~G~~aey~~v~~~~~~~~P~~~~~~~~~~~~~  138 (364)
T 1gu7_A           81 LFEVIKVGSNVSSLEAGDWVIPSH----------------------VNFGTWRTHALGNDDDFIKLPNPAQSKANGKPNG  138 (364)
T ss_dssp             EEEEEEECTTCCSCCTTCEEEESS----------------------SCCCCSBSEEEEEGGGEEEECCHHHHHHTTCSCC
T ss_pred             EEEEEEeCCCCCcCCCCCEEEecC----------------------CCCCcchheEecCHHHeEEcCCccccccccccCC
Confidence            999999999999999999998762                      1358999999999999999998           8


Q ss_pred             CCccchhhcccchhhhhhhhhhhcCCCCC-CeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhh----HHHHHhcCC
Q 018529          142 APLDKVCILSCGVSTGLGATLNVAKPERG-SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR----FEEAKKFGV  215 (354)
Q Consensus       142 ~~~~~aa~l~~~~~~a~~~l~~~~~~~~~-~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~----~~~~~~lg~  215 (354)
                      +++++||+++++++|||+++.+.+++++| ++|||+|+ |++|++++|+|+.+|+ +|+++.++.++    .++++++|+
T Consensus       139 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~~VlV~Ga~G~vG~~aiqlak~~Ga-~vi~~~~~~~~~~~~~~~~~~lGa  217 (364)
T 1gu7_A          139 LTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNF-NSISVIRDRPNLDEVVASLKELGA  217 (364)
T ss_dssp             CCHHHHHTCTTHHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTC-EEEEEECCCTTHHHHHHHHHHHTC
T ss_pred             CCHHHHhhccccHHHHHHHHHHhhccCCCCcEEEECCCCcHHHHHHHHHHHHCCC-EEEEEecCccccHHHHHHHHhcCC
Confidence            99999999999999999998777799999 99999997 9999999999999999 77777665554    677899999


Q ss_pred             ceEEcCCCC-ChhHHHHHHHHc--CC-CccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhh-hcccc
Q 018529          216 TDFVNTSEH-DRPIQEVIAEMT--NG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNER  290 (354)
Q Consensus       216 ~~v~~~~~~-~~~~~~~i~~~~--~~-~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~  290 (354)
                      ++++++.+. ..++.+.+++++  ++ ++|+||||+|++... .++++++++ |+++.+|.... ....+.... +.+++
T Consensus       218 ~~vi~~~~~~~~~~~~~i~~~t~~~~~g~Dvvid~~G~~~~~-~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~  294 (364)
T 1gu7_A          218 TQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKSST-GIARKLNNN-GLMLTYGGMSF-QPVTIPTSLYIFKNF  294 (364)
T ss_dssp             SEEEEHHHHHCGGGHHHHHHHHHHHTCCEEEEEESSCHHHHH-HHHHTSCTT-CEEEECCCCSS-CCEEECHHHHHHSCC
T ss_pred             eEEEecCccchHHHHHHHHHHhhccCCCceEEEECCCchhHH-HHHHHhccC-CEEEEecCCCC-CCcccCHHHHhhcCc
Confidence            999987641 123778888887  44 899999999985554 889999997 99999997652 222333333 34899


Q ss_pred             EEEEEeccCCCC------CCCHHHHHHHHHccCCCCCCceeeee-ccccHHHHHHHHhcCCc-eeEEEec
Q 018529          291 TLKGTFFGNYKP------RTDLPSVVDMYMNKQLELEKFITHRI-PFSEINKAFEYMVKGEG-LRCIISM  352 (354)
Q Consensus       291 ~i~g~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~v~~~~-~l~~~~~a~~~~~~~~~-~k~vi~~  352 (354)
                      ++.|++...+..      .++++++++++.+|++++.+..+..+ +++++++||+.+.+++. +|+||++
T Consensus       295 ~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  364 (364)
T 1gu7_A          295 TSAGFWVTELLKNNKELKTSTLNQIIAWYEEGKLTDAKSIETLYDGTKPLHELYQDGVANSKDGKQLITY  364 (364)
T ss_dssp             EEEECCHHHHHTTCHHHHHHHHHHHHHHHHHTCCCCCCCEEEECCSSSCHHHHHHHHHHTGGGSCEEEEC
T ss_pred             EEEEEchhHhcccCHHHHHHHHHHHHHHHHcCCcccccceEEecCchhhHHHHHHHHHhCCCCceEEEeC
Confidence            999987543211      13588999999999988876544445 45699999999987754 7999875

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=100.00  E-value=5.8e-52  Score=374.93  Aligned_cols=314  Identities=23%  Similarity=0.307  Sum_probs=266.0

Q ss_pred             cceeeeccCCCc--eEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCC-CC--CCCCcccccceeEEEEEeCCCCCC
Q 018529           11 CKAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKG-QT--PLFPRIFGHEAAGVVESVGEGVSD   85 (354)
Q Consensus        11 ~~a~~~~~~~~~--l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~-~~--~~~p~~~G~e~~G~V~~vG~~~~~   85 (354)
                      |||+++.+++.+  +++.+.|.|+|++|||+|||.++|||++|++++.|.. +.  ..+|.++|||++|+|+++|+++++
T Consensus         2 Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~   81 (333)
T 1wly_A            2 VMAAVIHKKGGPDNFVWEEVKVGSPGPGQVRLRNTAIGVNFLDTYHRAGIPHPLVVGEPPIVVGFEAAAVVEEVGPGVTD   81 (333)
T ss_dssp             CEEEEESSCSSGGGEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHC----------CCEECCCEEEEEEEEECTTCCS
T ss_pred             cEEEEEcccCCcceeEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhCCCcCCCCCCCCCccccceeEEEEEEECCCCCC
Confidence            899999988754  8999999999999999999999999999999988755 22  357999999999999999999999


Q ss_pred             CCCCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccc--hhhcccchhhhhhhhhh
Q 018529           86 LEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDK--VCILSCGVSTGLGATLN  163 (354)
Q Consensus        86 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~--aa~l~~~~~~a~~~l~~  163 (354)
                      |++||||++.+.                      ..|+|+||+.+|++.++++|+++++++  ||+++++++|||+++.+
T Consensus        82 ~~~GdrV~~~~~----------------------~~G~~aey~~v~~~~~~~iP~~~~~~~~~aa~l~~~~~ta~~~l~~  139 (333)
T 1wly_A           82 FTVGERVCTCLP----------------------PLGAYSQERLYPAEKLIKVPKDLDLDDVHLAGLMLKGMTAQYLLHQ  139 (333)
T ss_dssp             CCTTCEEEECSS----------------------SCCCSBSEEEEEGGGCEECCTTCCCCHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEecC----------------------CCCcceeEEEecHHHcEeCCCCCChHHhCccchhhhHHHHHHHHHH
Confidence            999999975421                      158999999999999999999999999  99999999999999877


Q ss_pred             hcCCCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC-Ccc
Q 018529          164 VAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVD  241 (354)
Q Consensus       164 ~~~~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~~d  241 (354)
                      .+++++|++|||+|+ |++|++++|+|+..|+ +|+++++++++.+.++++|++.++++.+.+  +.+.+.+.+.+ ++|
T Consensus       140 ~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~-~Vi~~~~~~~~~~~~~~~g~~~~~d~~~~~--~~~~i~~~~~~~~~d  216 (333)
T 1wly_A          140 THKVKPGDYVLIHAAAGGMGHIMVPWARHLGA-TVIGTVSTEEKAETARKLGCHHTINYSTQD--FAEVVREITGGKGVD  216 (333)
T ss_dssp             TSCCCTTCEEEETTTTSTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHTCSEEEETTTSC--HHHHHHHHHTTCCEE
T ss_pred             hhCCCCCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCEEEECCCHH--HHHHHHHHhCCCCCe
Confidence            889999999999996 9999999999999999 999999999999999999999999887655  77888888766 899


Q ss_pred             EEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchh--hhccc--cEEEEEeccCCCC----CCCHHHHHHHH
Q 018529          242 RSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI--NVLNE--RTLKGTFFGNYKP----RTDLPSVVDMY  313 (354)
Q Consensus       242 vv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~--~~~~~--~~i~g~~~~~~~~----~~~~~~~~~~~  313 (354)
                      ++||++|+ ..++.++++++++ |+++.+|..... ...+...  .+.++  +++.|++...+..    .++++++++++
T Consensus       217 ~vi~~~g~-~~~~~~~~~l~~~-G~iv~~g~~~~~-~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~l~  293 (333)
T 1wly_A          217 VVYDSIGK-DTLQKSLDCLRPR-GMCAAYGHASGV-ADPIRVVEDLGVRGSLFITRPALWHYMSNRSEIDEGSKCLFDAV  293 (333)
T ss_dssp             EEEECSCT-TTHHHHHHTEEEE-EEEEECCCTTCC-CCCCCHHHHTTTTTSCEEECCCGGGGSCSHHHHHHHHHHHHHHH
T ss_pred             EEEECCcH-HHHHHHHHhhccC-CEEEEEecCCCC-cCCCChhHhhhhcCCcEEEEEeehhhccCHHHHHHHHHHHHHHH
Confidence            99999998 8899999999997 999999976522 1223322  23477  8888875422211    12578899999


Q ss_pred             HccCCCCCCceeeeeccccHHHHHHHHhcCCc-eeEEEecCC
Q 018529          314 MNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISMED  354 (354)
Q Consensus       314 ~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~~~d  354 (354)
                      .+|+++  +.++++|+|+++++||+.+.+++. +|+||.++|
T Consensus       294 ~~g~l~--~~i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~~~  333 (333)
T 1wly_A          294 KAGVLH--SSVAKTFPLREAAAAHKYMGGRQTIGSIVLLPQA  333 (333)
T ss_dssp             HTTSCC--CCEEEEEEGGGHHHHHHHHHHCSCCSEEEEETTC
T ss_pred             HCCCcC--CCcceEEeHHHHHHHHHHHHcCCCceEEEEEeCC
Confidence            999775  458899999999999999988764 799999875

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=100.00  E-value=8.3e-53  Score=383.77  Aligned_cols=316  Identities=21%  Similarity=0.308  Sum_probs=259.2

Q ss_pred             ccchhcceeeeccCCCc---eEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCC-CCCCcccccceeEEEEEeCC
Q 018529            6 GLILTCKAAVAWEAGKP---LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGE   81 (354)
Q Consensus         6 ~~~~~~~a~~~~~~~~~---l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~   81 (354)
                      .+|.+|||+++.+++.+   +++++.|.|+|++|||+|||.++|||++|++.+.|..+. ..+|.++|||++|+|+++|+
T Consensus        22 ~m~~~mka~~~~~~g~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~P~v~G~E~~G~V~~vG~  101 (357)
T 1zsy_A           22 SMPARVRALVYGHHGDPAKVVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGLLPELPAVGGNEGVAQVVAVGS  101 (357)
T ss_dssp             CCCCCEEEEEESSSSCHHHHEEEEEECCCCCCTTEEEEEEEEEECCHHHHHHHHTCSSCCCCSSEECCSCCEEEEEEECT
T ss_pred             hCchhhEEEEEecCCCccceEEEeeccCCCCCCCEEEEEEEECCCCHHHhhHhcCCCCCCCCCCccccceEEEEEEEeCC
Confidence            37788999999999885   889999999999999999999999999999999886543 25799999999999999999


Q ss_pred             CCCCCCCCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhh
Q 018529           82 GVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGAT  161 (354)
Q Consensus        82 ~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l  161 (354)
                      ++++|++||||++.+                      .+.|+|+||+.+|++.++++|+++++++||+++++++|||+++
T Consensus       102 ~v~~~~vGdrV~~~~----------------------~~~G~~aey~~v~~~~~~~iP~~l~~~~Aa~l~~~~~ta~~~l  159 (357)
T 1zsy_A          102 NVTGLKPGDWVIPAN----------------------AGLGTWRTEAVFSEEALIQVPSDIPLQSAATLGVNPCTAYRML  159 (357)
T ss_dssp             TCCSCCTTCEEEESS----------------------SCSCCSBSEEEEEGGGEEEECSSSCHHHHHHTTSHHHHHHHHH
T ss_pred             CCCCCCCCCEEEEcC----------------------CCCccceeEEecCHHHcEECCCCCCHHHHhhhcccHHHHHHHH
Confidence            999999999998762                      1358999999999999999999999999999999999999998


Q ss_pred             hhhcCCCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCC-h---hhHHHHHhcCCceEEcCCCCChhHHHHHHHHc
Q 018529          162 LNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRS-S---KRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMT  236 (354)
Q Consensus       162 ~~~~~~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~-~---~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~  236 (354)
                      .+.+++++|++|||+|+ |++|++++|+|+.+|+ +++++.++ +   ++.++++++|+++++++.+.   ..+.+.+.+
T Consensus       160 ~~~~~~~~g~~VlV~Ga~G~vG~~aiqlak~~Ga-~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~---~~~~~~~~~  235 (357)
T 1zsy_A          160 MDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGL-RTINVVRDRPDIQKLSDRLKSLGAEHVITEEEL---RRPEMKNFF  235 (357)
T ss_dssp             HHSSCCCTTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEECCCSCHHHHHHHHHHTTCSEEEEHHHH---HSGGGGGTT
T ss_pred             HHHhccCCCCEEEEeCCcCHHHHHHHHHHHHcCC-EEEEEecCccchHHHHHHHHhcCCcEEEecCcc---hHHHHHHHH
Confidence            78889999999999997 9999999999999999 55555443 2   35788999999999886431   112345555


Q ss_pred             CC--CccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhh-hccccEEEEEeccCCC-------CCCCH
Q 018529          237 NG--GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNYK-------PRTDL  306 (354)
Q Consensus       237 ~~--~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~-------~~~~~  306 (354)
                      .+  ++|+|||++|++ ....++++++++ |+++.+|.... ....+.... +.+++++.|++...+.       .++.+
T Consensus       236 ~~~~~~Dvvid~~g~~-~~~~~~~~l~~~-G~iv~~G~~~~-~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~  312 (357)
T 1zsy_A          236 KDMPQPRLALNCVGGK-SSTELLRQLARG-GTMVTYGGMAK-QPVVASVSLLIFKDLKLRGFWLSQWKKDHSPDQFKELI  312 (357)
T ss_dssp             SSSCCCSEEEESSCHH-HHHHHHTTSCTT-CEEEECCCCTT-CCBCCCHHHHHHSCCEEEECCHHHHHHHSCHHHHHHHH
T ss_pred             hCCCCceEEEECCCcH-HHHHHHHhhCCC-CEEEEEecCCC-CCCCCCHHHHHhcCceEEEEEcchhcccCCHHHHHHHH
Confidence            44  599999999984 446789999997 99999986542 122333332 3489999998764321       01346


Q ss_pred             HHHHHHHHccCCCCCCceeeeeccccHHHHHHHHhcCCc-eeEEEec
Q 018529          307 PSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM  352 (354)
Q Consensus       307 ~~~~~~~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~~  352 (354)
                      +++++++.+|++++.  +.++|+|+++++||+.+.+++. +|+||++
T Consensus       313 ~~~~~l~~~g~l~~~--~~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  357 (357)
T 1zsy_A          313 LTLCDLIRRGQLTAP--ACSQVPLQDYQSALEASMKPFISSKQILTM  357 (357)
T ss_dssp             HHHHHHHHTTSSCCC--CEEEEEGGGHHHHHHHHTSSSCSSEEEEEC
T ss_pred             HHHHHHHHcCCCcCc--cceEEcHHHHHHHHHHHHhCCCCCcEEEeC
Confidence            889999999987765  4589999999999999987764 6999874

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=100.00  E-value=6.8e-52  Score=378.14  Aligned_cols=317  Identities=18%  Similarity=0.241  Sum_probs=269.3

Q ss_pred             cchhcceeeeccCCC----ceEE-EEeecCCCCCCeEEEEEeeeecCccchhhhccCCCC-CCCCcccccceeEEEEEeC
Q 018529            7 LILTCKAAVAWEAGK----PLII-QDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVG   80 (354)
Q Consensus         7 ~~~~~~a~~~~~~~~----~l~~-~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG   80 (354)
                      +|.+|||+++.+++.    .+++ +++|.|+|++|||+|||.++|||++|++++.|..+. ..+|.++|||++|+|+++|
T Consensus        20 ~~~~MkA~~~~~~g~~~~~~l~~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~P~i~G~E~~G~V~~vG   99 (362)
T 2c0c_A           20 FQSMMQKLVVTRLSPNFREAVTLSRDCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDPSVKPPFDIGFEGIGEVVALG   99 (362)
T ss_dssp             HCCEEEEEEECSCCSSHHHHEEEEEEEECCCCCTTEEEEEEEEEECCTTHHHHHTTTTCTTCCSCEECCSEEEEEEEEEC
T ss_pred             chhhceEEEEeecCCCccceeEEEeecCCCCCCCCeEEEEEEEeccCHHHHHHhcCCCCCCCCCCCCCCceeEEEEEEEC
Confidence            567899999999875    3889 999999999999999999999999999999886543 4679999999999999999


Q ss_pred             CCCC-CCCCCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhh
Q 018529           81 EGVS-DLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLG  159 (354)
Q Consensus        81 ~~~~-~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~  159 (354)
                      ++++ +|++||||++.                        ..|+|+||+.+|++.++++|+. + .++++++++++|||+
T Consensus       100 ~~V~~~~~vGdrV~~~------------------------~~G~~aey~~v~~~~~~~~P~~-~-~~aaal~~~~~ta~~  153 (362)
T 2c0c_A          100 LSASARYTVGQAVAYM------------------------APGSFAEYTVVPASIATPVPSV-K-PEYLTLLVSGTTAYI  153 (362)
T ss_dssp             TTGGGTCCTTCEEEEE------------------------CSCCSBSEEEEEGGGCEECSSS-C-HHHHTTTTHHHHHHH
T ss_pred             CCccCCCCCCCEEEEc------------------------cCCcceeEEEEcHHHeEECCCC-c-hHhhcccchHHHHHH
Confidence            9999 99999999865                        3589999999999999999996 3 467888889999999


Q ss_pred             hhhhhcCCCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC
Q 018529          160 ATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG  238 (354)
Q Consensus       160 ~l~~~~~~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~  238 (354)
                      ++.+.+++++|++|||+|+ |++|++++|+|+..|+ +|+++++++++.++++++|++.++++.+.+  +.+.+++.+++
T Consensus       154 al~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~--~~~~~~~~~~~  230 (362)
T 2c0c_A          154 SLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKC-HVIGTCSSDEKSAFLKSLGCDRPINYKTEP--VGTVLKQEYPE  230 (362)
T ss_dssp             HHHHHTCCCTTCEEEETTTTBTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSEEEETTTSC--HHHHHHHHCTT
T ss_pred             HHHHhcCCCCCCEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHcCCcEEEecCChh--HHHHHHHhcCC
Confidence            9888889999999999995 9999999999999999 899999999999999999999999887755  77888887755


Q ss_pred             CccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCce------e---ecchhhhccccEEEEEeccCCC--CCCCHH
Q 018529          239 GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAV------F---MTKPINVLNERTLKGTFFGNYK--PRTDLP  307 (354)
Q Consensus       239 ~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~------~---~~~~~~~~~~~~i~g~~~~~~~--~~~~~~  307 (354)
                      ++|+|||++|+ ..++.++++++++ |+++.+|.......      .   .+....+.+++++.|++...+.  ..++++
T Consensus       231 g~D~vid~~g~-~~~~~~~~~l~~~-G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~  308 (362)
T 2c0c_A          231 GVDVVYESVGG-AMFDLAVDALATK-GRLIVIGFISGYQTPTGLSPVKAGTLPAKLLKKSASVQGFFLNHYLSKYQAAMS  308 (362)
T ss_dssp             CEEEEEECSCT-HHHHHHHHHEEEE-EEEEECCCGGGTTSSSCCCCCCCTTHHHHHHHHTCEEEECCGGGCGGGHHHHHH
T ss_pred             CCCEEEECCCH-HHHHHHHHHHhcC-CEEEEEeCCCCcCcccccccccccccHHHHHhhcceEEEEEhhhhhhhHHHHHH
Confidence            89999999998 7899999999997 99999987542110      0   1112224489999998764432  124588


Q ss_pred             HHHHHHHccCCCCCCc------eeeeeccccHHHHHHHHhcCCc-eeEEEecCC
Q 018529          308 SVVDMYMNKQLELEKF------ITHRIPFSEINKAFEYMVKGEG-LRCIISMED  354 (354)
Q Consensus       308 ~~~~~~~~~~~~~~~~------v~~~~~l~~~~~a~~~~~~~~~-~k~vi~~~d  354 (354)
                      ++++++.+|++++...      +.+.|+|+++++||+.+.+++. +|+||+++|
T Consensus       309 ~~~~l~~~g~l~~~~~~~~~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~~  362 (362)
T 2c0c_A          309 HLLEMCVSGDLVCEVDLGDLSPEGRFTGLESIFRAVNYMYMGKNTGKIVVELPH  362 (362)
T ss_dssp             HHHHHHHTTCSCCCEECSTTSTTCSCBSTTHHHHHHHHHHTTCCSBEEEEECCC
T ss_pred             HHHHHHHCCCeEeeeccccccccccccCHHHHHHHHHHHHcCCCCceEEEEcCC
Confidence            9999999998876533      3467899999999999988764 799999876

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=2.4e-51  Score=370.08  Aligned_cols=313  Identities=19%  Similarity=0.242  Sum_probs=264.4

Q ss_pred             hcceeeeccCCCc--eEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCC
Q 018529           10 TCKAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLE   87 (354)
Q Consensus        10 ~~~a~~~~~~~~~--l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   87 (354)
                      +|||+++.+++.+  +++.+.|.|+|++|||+|||.++|||++|++.+.|..+...+|.++|||++|+|+++|+++++|+
T Consensus         1 ~Mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~   80 (327)
T 1qor_A            1 MATRIEFHKHGGPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPPPSLPSGLGTEAAGIVSKVGSGVKHIK   80 (327)
T ss_dssp             -CEEEEBSSCCSGGGCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSCCSSSSBCCCSCEEEEEEEECTTCCSCC
T ss_pred             CcEEEEEcCCCChhheEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCCCceeEEEEEEECCCCCCCC
Confidence            3899999988754  89999999999999999999999999999999988665455799999999999999999999999


Q ss_pred             CCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhcCC
Q 018529           88 VGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKP  167 (354)
Q Consensus        88 ~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~~~  167 (354)
                      +|||| +..    +                 ...|+|+||+.+|++.++++|+++++++||+++++++|||+++.+.+++
T Consensus        81 ~GdrV-~~~----g-----------------~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~  138 (327)
T 1qor_A           81 AGDRV-VYA----Q-----------------SALGAYSSVHNIIADKAAILPAAISFEQAAASFLKGLTVYYLLRKTYEI  138 (327)
T ss_dssp             TTCEE-EES----C-----------------CSSCCSBSEEEEEGGGEEECCTTSCHHHHHHHHHHHHHHHHHHHTTSCC
T ss_pred             CCCEE-EEC----C-----------------CCCceeeeEEEecHHHcEECCCCCCHHHHHHhhhHHHHHHHHHHHhhCC
Confidence            99999 331    0                 1248999999999999999999999999999999999999998778899


Q ss_pred             CCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC-CccEEEE
Q 018529          168 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVE  245 (354)
Q Consensus       168 ~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~~dvv~d  245 (354)
                      ++|++|||+|+ |++|++++|+|+..|+ +|+++++++++.+.++++|++.++++.+.+  +.+.+.+.+.+ ++|++||
T Consensus       139 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G~-~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~D~vi~  215 (327)
T 1qor_A          139 KPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGTAQKAQSALKAGAWQVINYREED--LVERLKEITGGKKVRVVYD  215 (327)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHTCSEEEETTTSC--HHHHHHHHTTTCCEEEEEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEECCCcc--HHHHHHHHhCCCCceEEEE
Confidence            99999999995 9999999999999999 999999999999999999999999887665  78888888766 8999999


Q ss_pred             cccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhh-hcc-ccEEEEEeccCCCC-----CCCHHHHHHHHHccCC
Q 018529          246 CTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLN-ERTLKGTFFGNYKP-----RTDLPSVVDMYMNKQL  318 (354)
Q Consensus       246 ~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~-~~~i~g~~~~~~~~-----~~~~~~~~~~~~~~~~  318 (354)
                      ++| .+.++.++++++++ |+++.+|..... ...+.... +.+ ++++.+...+.+..     .+.++++++++.+|++
T Consensus       216 ~~g-~~~~~~~~~~l~~~-G~iv~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l  292 (327)
T 1qor_A          216 SVG-RDTWERSLDCLQRR-GLMVSFGNSSGA-VTGVNLGILNQKGSLYVTRPSLQGYITTREELTEASNELFSLIASGVI  292 (327)
T ss_dssp             CSC-GGGHHHHHHTEEEE-EEEEECCCTTCC-CCCBCTHHHHHTTSCEEECCCHHHHCCSHHHHHHHHHHHHHHHHTTSS
T ss_pred             CCc-hHHHHHHHHHhcCC-CEEEEEecCCCC-CCccCHHHHhhccceEEEccchhhhcCCHHHHHHHHHHHHHHHHCCCc
Confidence            999 58999999999997 999999976532 12222222 235 77777543322211     2347889999999977


Q ss_pred             CCCCcee--eeeccccHHHHHHHHhcCCc-eeEEEec
Q 018529          319 ELEKFIT--HRIPFSEINKAFEYMVKGEG-LRCIISM  352 (354)
Q Consensus       319 ~~~~~v~--~~~~l~~~~~a~~~~~~~~~-~k~vi~~  352 (354)
                      ++  .++  ++|+|+++++||+.+.+++. +|+||.+
T Consensus       293 ~~--~i~~~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  327 (327)
T 1qor_A          293 KV--DVAEQQKYPLKDAQRAHEILESRATQGSSLLIP  327 (327)
T ss_dssp             CC--CCCGGGEEEGGGHHHHHHHHHTTCCCBCCEEEC
T ss_pred             cc--ccccCcEEcHHHHHHHHHHHHhCCCCceEEEeC
Confidence            65  477  89999999999999988764 7988864

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=100.00  E-value=5.1e-52  Score=374.09  Aligned_cols=312  Identities=16%  Similarity=0.171  Sum_probs=261.6

Q ss_pred             cceeeeccCCCc--eEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCC-CCCCcccccceeEEEEEeCCCCCCCC
Q 018529           11 CKAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLE   87 (354)
Q Consensus        11 ~~a~~~~~~~~~--l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~~~~~~   87 (354)
                      |||+++.+++++  ++++++|.|+|++|||+|||.++|||++|++.+.|..+. ..+|.++|||++|+|+++|  +++|+
T Consensus         1 MkA~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~~G--v~~~~   78 (324)
T 3nx4_A            1 MQALILEQQDGKTLASVQHLEESQLPAGDVTVDVHWSSLNYKDALAITGKGKIIRHFPMIPGIDFAGTVHASE--DPRFH   78 (324)
T ss_dssp             CEEEEEEESSSSEEEEEEECCGGGSCCCSEEEEEEEEEECHHHHHHHHTCTTCCCSSSBCCCSEEEEEEEEES--STTCC
T ss_pred             CceEEEecCCCCceeeEeecCCCCCCCCEEEEEEEEEeCCHHHHhhhcCCCCCCCCCCccccceeEEEEEEeC--CCCCC
Confidence            899999999986  889999999999999999999999999999999887654 5679999999999999998  57899


Q ss_pred             CCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhh--hhc
Q 018529           88 VGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATL--NVA  165 (354)
Q Consensus        88 ~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~--~~~  165 (354)
                      +||||++.+   |.              .+....|+|+||+.+|++.++++|+++++++||++++++.|||+++.  ...
T Consensus        79 vGdrV~~~~---~~--------------~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~  141 (324)
T 3nx4_A           79 AGQEVLLTG---WG--------------VGENHWGGLAERARVKGDWLVALPAGLSSRNAMIIGTAGFTAMLCVMALEDA  141 (324)
T ss_dssp             TTCEEEEEC---TT--------------BTTTBCCSSBSEEEECGGGCEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEcc---cc--------------cCCCCCCceeeEEecCHHHcEECCCCCCHHHHHHhhhHHHHHHHHHHHhhhc
Confidence            999999763   10              12235689999999999999999999999999999999999998875  445


Q ss_pred             CCCCCC-eEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEE
Q 018529          166 KPERGS-SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRS  243 (354)
Q Consensus       166 ~~~~~~-~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv  243 (354)
                      ++++++ +|||+|+ |++|++++|+|+.+|+ +|++++++++|.++++++|+++++++++.+  .   +++++++++|+|
T Consensus       142 ~~~~~~g~VlV~Ga~G~vG~~aiqla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~--~---~~~~~~~~~d~v  215 (324)
T 3nx4_A          142 GIRPQDGEVVVTGASGGVGSTAVALLHKLGY-QVAAVSGRESTHGYLKSLGANRILSRDEFA--E---SRPLEKQLWAGA  215 (324)
T ss_dssp             TCCGGGCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCGGGHHHHHHHTCSEEEEGGGSS--C---CCSSCCCCEEEE
T ss_pred             ccCCCCCeEEEECCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCCEEEecCCHH--H---HHhhcCCCccEE
Confidence            677743 4999997 9999999999999999 999999999999999999999999987654  2   455555689999


Q ss_pred             EEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhh-hccccEEEEEeccCCCC---CCCHHHHHHHHHccCCC
Q 018529          244 VECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNYKP---RTDLPSVVDMYMNKQLE  319 (354)
Q Consensus       244 ~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~~---~~~~~~~~~~~~~~~~~  319 (354)
                      ||++|+ +.++.++++++++ |+++.+|..... ...+.... +.+++++.|++......   .+.++++++++.+|+++
T Consensus       216 ~d~~g~-~~~~~~~~~l~~~-G~iv~~G~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~g~l~  292 (324)
T 3nx4_A          216 IDTVGD-KVLAKVLAQMNYG-GCVAACGLAGGF-ALPTTVMPFILRNVRLQGVDSVMTPPARRAEAWARLVKDLPESFYA  292 (324)
T ss_dssp             EESSCH-HHHHHHHHTEEEE-EEEEECCCTTCS-EEEEESHHHHHHCCEEEECCSTTCCHHHHHHHHHHHHHHSCHHHHH
T ss_pred             EECCCc-HHHHHHHHHHhcC-CEEEEEecCCCC-CCCCCHHHHhhcCeEEEEEeccccChHHHHHHHHHHHHHHHcCCCC
Confidence            999998 5899999999997 999999987532 23333332 45899999986533211   13477888888888665


Q ss_pred             CCCceeeeeccccHHHHHHHHhcCCc-eeEEEecC
Q 018529          320 LEKFITHRIPFSEINKAFEYMVKGEG-LRCIISME  353 (354)
Q Consensus       320 ~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~~~  353 (354)
                      +  . +++|+|+++++||+.+.+++. +|+||+++
T Consensus       293 ~--~-~~~~~l~~~~~A~~~~~~~~~~gkvvv~~~  324 (324)
T 3nx4_A          293 Q--A-ATEITLADAPKFADAIINNQVQGRTLVKIK  324 (324)
T ss_dssp             H--H-EEEEEGGGHHHHHHHHHTTCCCSEEEEECC
T ss_pred             C--C-ceeEeHHHHHHHHHHHHhCCCCceEEEecC
Confidence            4  3 899999999999999998886 69999874

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=100.00  E-value=6.7e-50  Score=361.96  Aligned_cols=308  Identities=16%  Similarity=0.211  Sum_probs=260.9

Q ss_pred             hhcceeeeccC------CCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccc----eeEEEEE
Q 018529            9 LTCKAAVAWEA------GKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHE----AAGVVES   78 (354)
Q Consensus         9 ~~~~a~~~~~~------~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e----~~G~V~~   78 (354)
                      ++|||+++.+.      .+.+++.++|.|+|++|||||||.+++||++|+..+.+... ..+|.++|||    ++|+|++
T Consensus         6 ~~mka~v~~~~~~g~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~d~~~~~~~~~-~~~p~~~G~e~g~~~~G~V~~   84 (336)
T 4b7c_A            6 QINRQYQLAQRPSGLPGRDTFSFVETPLGEPAEGQILVKNEYLSLDPAMRGWMNDARS-YIPPVGIGEVMRALGVGKVLV   84 (336)
T ss_dssp             CEEEEEEECSCCSSSCCTTSEEEEEEECCCCCTTCEEEEEEEEECCTHHHHHHSCSCC-SSCCCCTTSBCCCEEEEEEEE
T ss_pred             ccccEEEEEecCCCCCCCCceEEEeccCCCCCCCEEEEEEEEEEeCHHHHhhhhcccc-cCCCCCCCcccCCceEEEEEe
Confidence            67999999861      23399999999999999999999999999999988766332 3457777887    7999999


Q ss_pred             eCCCCCCCCCCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccch--hhcccchhh
Q 018529           79 VGEGVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKV--CILSCGVST  156 (354)
Q Consensus        79 vG~~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~a--a~l~~~~~~  156 (354)
                      .  ++++|++||||++.                          |+|+||+.+|++.++++|+++++.++  ++++++++|
T Consensus        85 ~--~v~~~~vGdrV~~~--------------------------G~~aey~~v~~~~~~~~P~~~~~~~~a~a~l~~~~~t  136 (336)
T 4b7c_A           85 S--KHPGFQAGDYVNGA--------------------------LGVQDYFIGEPKGFYKVDPSRAPLPRYLSALGMTGMT  136 (336)
T ss_dssp             E--CSTTCCTTCEEEEE--------------------------CCSBSEEEECCTTCEEECTTTSCGGGGGTTTSHHHHH
T ss_pred             c--CCCCCCCCCEEecc--------------------------CCceEEEEechHHeEEcCCCCCchHHHhhhcccHHHH
Confidence            4  58899999999854                          79999999999999999999988877  788999999


Q ss_pred             hhhhhhhhcCCCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-HhcCCceEEcCCCCChhHHHHHHH
Q 018529          157 GLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTDFVNTSEHDRPIQEVIAE  234 (354)
Q Consensus       157 a~~~l~~~~~~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~~lg~~~v~~~~~~~~~~~~~i~~  234 (354)
                      ||+++.+.+++++|++|||+|+ |++|++++|+|+..|+ +|+++++++++.+++ +++|++.++++.+.+  +.+.+++
T Consensus       137 A~~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~  213 (336)
T 4b7c_A          137 AYFALLDVGQPKNGETVVISGAAGAVGSVAGQIARLKGC-RVVGIAGGAEKCRFLVEELGFDGAIDYKNED--LAAGLKR  213 (336)
T ss_dssp             HHHHHHHTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCCSEEEETTTSC--HHHHHHH
T ss_pred             HHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCCEEEECCCHH--HHHHHHH
Confidence            9999878999999999999998 9999999999999999 999999999999999 899999999988765  8888999


Q ss_pred             HcCCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCC-----ceeecchhh-hccccEEEEEeccCCCC--CCCH
Q 018529          235 MTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD-----AVFMTKPIN-VLNERTLKGTFFGNYKP--RTDL  306 (354)
Q Consensus       235 ~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~-----~~~~~~~~~-~~~~~~i~g~~~~~~~~--~~~~  306 (354)
                      .+++++|++||++|+ +.++.++++++++ |+++.+|.....     ....+.... +.+++++.|++...+..  .+++
T Consensus       214 ~~~~~~d~vi~~~g~-~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~  291 (336)
T 4b7c_A          214 ECPKGIDVFFDNVGG-EILDTVLTRIAFK-ARIVLCGAISQYNNKEAVRGPANYLSLLVNRARMEGMVVMDYAQRFPEGL  291 (336)
T ss_dssp             HCTTCEEEEEESSCH-HHHHHHHTTEEEE-EEEEECCCGGGGC------CCTTTTHHHHTTCEEEECCGGGGGGGHHHHH
T ss_pred             hcCCCceEEEECCCc-chHHHHHHHHhhC-CEEEEEeecccccCCcccccchhHHHHHhCCcEEEEEEhhhhhhhhHHHH
Confidence            886699999999997 7899999999997 999999876421     011222222 34899999988654321  2467


Q ss_pred             HHHHHHHHccCCCCCCceeeeeccccHHHHHHHHhcCCc-eeEEEec
Q 018529          307 PSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM  352 (354)
Q Consensus       307 ~~~~~~~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~~  352 (354)
                      +++++++.+|++++..  ...++|+++++||+.+.+++. +|+||++
T Consensus       292 ~~~~~l~~~g~l~~~~--~~~~~l~~~~~A~~~~~~~~~~gKvvi~~  336 (336)
T 4b7c_A          292 KEMATWLAEGKLQSRE--DIVEGLETFPETLLKLFSGENFGKLVLKV  336 (336)
T ss_dssp             HHHHHHHHTTSSCCCE--EEEECGGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             HHHHHHHHCCCcccce--eeecCHHHHHHHHHHHHcCCCCceEEEeC
Confidence            8999999999887764  456899999999999998875 6999875

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=100.00  E-value=9.5e-50  Score=365.97  Aligned_cols=317  Identities=21%  Similarity=0.265  Sum_probs=256.3

Q ss_pred             cccchhcceeeeccCCCc--eEE-EEeecCCC-CCCeEEEEEeeeecCccchhhhccCCC-------------C--CCCC
Q 018529            5 AGLILTCKAAVAWEAGKP--LII-QDVEVAPP-QAMEVRIKIKYTSLCRTDLYFWESKGQ-------------T--PLFP   65 (354)
Q Consensus         5 ~~~~~~~~a~~~~~~~~~--l~~-~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~~~~~-------------~--~~~p   65 (354)
                      ++++++|||+++.+++.+  +++ +++|.|.| ++|||+|||.++|||++|++++.|..+             .  ..+|
T Consensus        16 ~~~~~~mka~~~~~~g~~~~l~~~~~~p~P~~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~~~~~~~~~~~~~~~P   95 (375)
T 2vn8_A           16 ENLYFQSMAWVIDKYGKNEVLRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNMKRDPLHVKIKGEEFP   95 (375)
T ss_dssp             --CCCCEEEEEBSSCCSGGGCEEEEEECCCCCCSTTEEEEEEEEEEECHHHHHHHTTTTHHHHHHHHCTTCCSCTTTTCS
T ss_pred             cccCccceeEEeccCCCccceEEeccccCCCCCCCCEEEEEEEEEEcCHHHHHHhccCccccccccccccccccccccCC
Confidence            458889999999998764  888 99999985 999999999999999999999887421             1  2378


Q ss_pred             cccccceeEEEEEeCCCCCCCCCCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCcc
Q 018529           66 RIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLD  145 (354)
Q Consensus        66 ~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~  145 (354)
                      .++|||++|+|+++|+++++|++||||++.+..                    ...|+|+||+.+|++.++++|++++++
T Consensus        96 ~v~G~E~~G~V~~vG~~V~~~~vGDrV~~~~~~--------------------~~~G~~aey~~v~~~~~~~iP~~ls~~  155 (375)
T 2vn8_A           96 LTLGRDVSGVVMECGLDVKYFKPGDEVWAAVPP--------------------WKQGTLSEFVVVSGNEVSHKPKSLTHT  155 (375)
T ss_dssp             BCCCCEEEEEEEEECTTCCSCCTTCEEEEECCT--------------------TSCCSSBSEEEEEGGGEEECCTTSCHH
T ss_pred             cccceeeeEEEEEeCCCCCCCCCCCEEEEecCC--------------------CCCccceeEEEEcHHHeeeCCCCCCHH
Confidence            999999999999999999999999999976321                    135899999999999999999999999


Q ss_pred             chhhcccchhhhhhhhhhhcC----CCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEc
Q 018529          146 KVCILSCGVSTGLGATLNVAK----PERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN  220 (354)
Q Consensus       146 ~aa~l~~~~~~a~~~l~~~~~----~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~  220 (354)
                      +||+++++++|||+++.+.++    +++|++|||+|+ |++|++++|+|+..|+ +|++++ +++++++++++|++.+++
T Consensus       156 ~Aa~l~~~~~tA~~al~~~~~~~~~~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga-~Vi~~~-~~~~~~~~~~lGa~~v~~  233 (375)
T 2vn8_A          156 QAASLPYVALTAWSAINKVGGLNDKNCTGKRVLILGASGGVGTFAIQVMKAWDA-HVTAVC-SQDASELVRKLGADDVID  233 (375)
T ss_dssp             HHTTSHHHHHHHHHHHTTTTCCCTTTCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEE-CGGGHHHHHHTTCSEEEE
T ss_pred             HHhhhHHHHHHHHHHHHHhcccccccCCCCEEEEECCCCHHHHHHHHHHHhCCC-EEEEEe-ChHHHHHHHHcCCCEEEE
Confidence            999999999999999877788    999999999995 9999999999999999 888887 678999999999999999


Q ss_pred             CCCCChhHHHHHHHHcCCCccEEEEcccCh-HhHHHHHHHhhCCCceEEEEcCCCCCce----eecch----hhh-c---
Q 018529          221 TSEHDRPIQEVIAEMTNGGVDRSVECTGNI-DNMISAFECVHDGWGVAVLVGVPSKDAV----FMTKP----INV-L---  287 (354)
Q Consensus       221 ~~~~~~~~~~~i~~~~~~~~dvv~d~~g~~-~~~~~~~~~l~~~~g~~v~~g~~~~~~~----~~~~~----~~~-~---  287 (354)
                      +.+.+  +.+.+.+.  +++|+|||++|++ ..+..++++++++ |+++.+|.......    .....    ..+ .   
T Consensus       234 ~~~~~--~~~~~~~~--~g~D~vid~~g~~~~~~~~~~~~l~~~-G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  308 (375)
T 2vn8_A          234 YKSGS--VEEQLKSL--KPFDFILDNVGGSTETWAPDFLKKWSG-ATYVTLVTPFLLNMDRLGIADGMLQTGVTVGSKAL  308 (375)
T ss_dssp             TTSSC--HHHHHHTS--CCBSEEEESSCTTHHHHGGGGBCSSSC-CEEEESCCSHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred             CCchH--HHHHHhhc--CCCCEEEECCCChhhhhHHHHHhhcCC-cEEEEeCCCcccccccccccchhheeehhhccccc
Confidence            87755  76666653  4899999999986 4568888999997 99999986532100    00000    011 1   


Q ss_pred             ----cccEEEEEeccCCCCCCCHHHHHHHHHccCCCCCCceeeeeccccHHHHHHHHhcCCc-eeEEEec
Q 018529          288 ----NERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM  352 (354)
Q Consensus       288 ----~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~~  352 (354)
                          +...+.+.+.  ....++++++++++.+|+++  +.++++|||+++++||+.+.+++. +|+||++
T Consensus       309 ~~~~~g~~~~~~~~--~~~~~~~~~~~~l~~~g~l~--~~i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~  374 (375)
T 2vn8_A          309 KHFWKGVHYRWAFF--MASGPCLDDIAELVDAGKIR--PVIEQTFPFSKVPEAFLKVERGHARGKTVINV  374 (375)
T ss_dssp             HHHHTTCEEEECCC--CCCHHHHHHHHHHHHTTSCC--CCEEEEEEGGGHHHHHHHHHHCCCSSEEEEEC
T ss_pred             cccccCcceEEEEe--CCCHHHHHHHHHHHHCCCcc--cCcCeEECHHHHHHHHHHHHcCCCCCeEEEEe
Confidence                2333332221  11224578999999999765  568899999999999999988764 7999875

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=100.00  E-value=1.6e-50  Score=365.17  Aligned_cols=317  Identities=16%  Similarity=0.174  Sum_probs=252.5

Q ss_pred             chhcceeeeccCCC--ceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCC-CCCCcccccceeEEEEEeCCCCC
Q 018529            8 ILTCKAAVAWEAGK--PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVS   84 (354)
Q Consensus         8 ~~~~~a~~~~~~~~--~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~~~   84 (354)
                      |++|||+++.+++.  .++++++|.|+|++|||+|||.++|||++|++.+.|..+. ..+|.++|||++|+|+++|  ++
T Consensus         2 ~~~mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~E~~G~V~~~~--v~   79 (330)
T 1tt7_A            2 STLFQALQAEKNADDVSVHVKTISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGNIVREYPLILGIDAAGTVVSSN--DP   79 (330)
T ss_dssp             CCEEEEEEECCGGGSCCCEEEEEESSSSCSSSEEEEECCEEECHHHHHHTSTTCTTCSSCSEECCSEEEEEEEECS--ST
T ss_pred             CCcceEEEEecCCCCcceeEeecCCCCCCCCEEEEEEEEEecCHHHHhhhcCCCCCcCCCCccccceEEEEEEEcC--CC
Confidence            45899999999873  4899999999999999999999999999999998876543 3579999999999999964  57


Q ss_pred             CCCCCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhh--
Q 018529           85 DLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATL--  162 (354)
Q Consensus        85 ~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~--  162 (354)
                      +|++||||++.+..                 .+....|+|+||+.+|++.++++|+++++++||++++++.|||.++.  
T Consensus        80 ~~~vGdrV~~~~~~-----------------~g~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~~l~~~  142 (330)
T 1tt7_A           80 RFAEGDEVIATSYE-----------------LGVSRDGGLSEYASVPGDWLVPLPQNLSLKEAMVYGTAGFTAALSVHRL  142 (330)
T ss_dssp             TCCTTCEEEEESTT-----------------BTTTBCCSSBSSEEECGGGEEECCTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEcccc-----------------cCCCCCccceeEEEecHHHeEECCCCCCHHHHhhccchHHHHHHHHHHH
Confidence            89999999875210                 11224589999999999999999999999999999999999998764  


Q ss_pred             hhcCCCCCC-eEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCc
Q 018529          163 NVAKPERGS-SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGV  240 (354)
Q Consensus       163 ~~~~~~~~~-~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~  240 (354)
                      ...++++|+ +|||+|+ |++|++++|+|+.+|+ +|++++++++++++++++|+++++++.+.+   .+.+++++.+++
T Consensus       143 ~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga-~vi~~~~~~~~~~~~~~lGa~~v~~~~~~~---~~~~~~~~~~~~  218 (330)
T 1tt7_A          143 EQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGY-DVVASTGNREAADYLKQLGASEVISREDVY---DGTLKALSKQQW  218 (330)
T ss_dssp             HHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTC-CEEEEESSSSTHHHHHHHTCSEEEEHHHHC---SSCCCSSCCCCE
T ss_pred             HhcCcCCCCceEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCcEEEECCCch---HHHHHHhhcCCc
Confidence            457889997 9999997 9999999999999999 799999999999999999999998764321   111233444489


Q ss_pred             cEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhh-hccccEEEEEeccCCCC---CCCHHHHHHHHHcc
Q 018529          241 DRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNYKP---RTDLPSVVDMYMNK  316 (354)
Q Consensus       241 dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~~---~~~~~~~~~~~~~~  316 (354)
                      |+|||++|+ +.++.++++++++ |+++.+|..... ...+.... +.+++++.|++......   .+.++.+++++.++
T Consensus       219 d~vid~~g~-~~~~~~~~~l~~~-G~iv~~G~~~~~-~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~g  295 (330)
T 1tt7_A          219 QGAVDPVGG-KQLASLLSKIQYG-GSVAVSGLTGGG-EVPATVYPFILRGVSLLGIDSVYCPMDVRAAVWERMSSDLKPD  295 (330)
T ss_dssp             EEEEESCCT-HHHHHHHTTEEEE-EEEEECCCSSCS-CEEECSHHHHTSCCEEEECCSSSCCHHHHHHHHHHTTTTSCCS
T ss_pred             cEEEECCcH-HHHHHHHHhhcCC-CEEEEEecCCCC-ccCcchHHHHhcCeEEEEEeccccCHHHHHHHHHHHHHHHhcC
Confidence            999999999 6899999999997 999999976532 22333222 45899999875322110   11234455555566


Q ss_pred             CCCCCCceeeeeccccHHHHHHHHhcCCc-eeEEEec
Q 018529          317 QLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM  352 (354)
Q Consensus       317 ~~~~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~~  352 (354)
                      ++  .+.++++|||+++++||+.+.+++. +|+||++
T Consensus       296 ~l--~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~  330 (330)
T 1tt7_A          296 QL--LTIVDREVSLEETPGALKDILQNRIQGRVIVKL  330 (330)
T ss_dssp             CS--TTSEEEEECSTTHHHHHHHTTTTCCSSEEEECC
T ss_pred             Cc--ccccceEEcHHHHHHHHHHHHcCCCCCeEEEeC
Confidence            54  4567899999999999999987764 7998864

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=100.00  E-value=4.2e-50  Score=368.35  Aligned_cols=312  Identities=16%  Similarity=0.177  Sum_probs=256.0

Q ss_pred             chhcceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCC---------------------------
Q 018529            8 ILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ---------------------------   60 (354)
Q Consensus         8 ~~~~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~---------------------------   60 (354)
                      +.+|||++.......++++++|.|+|++|||||||.+++||++|++++.|..+                           
T Consensus         5 ~~~mka~v~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~g~~~~p~~~~~~p~~~~~~~   84 (379)
T 3iup_A            5 ALQLRSRIKSSGELELSLDSIDTPHPGPDEVLIRIEASPLNPSDLGLLFGAADMSTAKASGTAERPIVTARVPEGAMRSM   84 (379)
T ss_dssp             EEEEEEEECTTSEEEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTTCEEEEEEEEECSSSEEEEEECCHHHHHHH
T ss_pred             hhhHHHHHhcCCCCceEEEeccCCCCCCCEEEEEEEEEecCHHHHHHhcCCccccccccccccccccccccCcccccccc
Confidence            67899998865545599999999999999999999999999999999887421                           


Q ss_pred             --CCCCCcccccceeEEEEEeCCCC-CCCCCCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEE
Q 018529           61 --TPLFPRIFGHEAAGVVESVGEGV-SDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAK  137 (354)
Q Consensus        61 --~~~~p~~~G~e~~G~V~~vG~~~-~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~  137 (354)
                        ...+|.++|||++|+|+++|+++ ++|++||||++.                        ..|+|+||+.+|++.+++
T Consensus        85 ~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~vGdrV~~~------------------------~~G~~aey~~v~~~~~~~  140 (379)
T 3iup_A           85 AGRLDASMPVGNEGAGVVVEAGSSPAAQALMGKTVAAI------------------------GGAMYSQYRCIPADQCLV  140 (379)
T ss_dssp             GGGTTEEEECCSCEEEEEEEECSSHHHHTTTTCEEEEC------------------------CSCCSBSEEEEEGGGEEE
T ss_pred             ccccCCCccceeeeEEEEEEeCCCcccCCCCCCEEEec------------------------CCCcceeEEEeCHHHeEE
Confidence              23468999999999999999999 889999999875                        358999999999999999


Q ss_pred             CCCCCCccchhhcccchhhhhhhhhhhcCCCCCCeEEEE--cCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCC
Q 018529          138 INPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVF--GLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV  215 (354)
Q Consensus       138 ~P~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vlI~--G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~  215 (354)
                      +|+++++++||++++..+|||+++ +... ++|++|||+  |+|++|++++|+|+.+|+ +|++++++++|+++++++|+
T Consensus       141 iP~~~~~~~aa~l~~~~~ta~~~~-~~~~-~~g~~vlV~gag~G~vG~~a~q~a~~~Ga-~Vi~~~~~~~~~~~~~~lGa  217 (379)
T 3iup_A          141 LPEGATPADGASSFVNPLTALGMV-ETMR-LEGHSALVHTAAASNLGQMLNQICLKDGI-KLVNIVRKQEQADLLKAQGA  217 (379)
T ss_dssp             CCTTCCHHHHTTSSHHHHHHHHHH-HHHH-HTTCSCEEESSTTSHHHHHHHHHHHHHTC-CEEEEESSHHHHHHHHHTTC
T ss_pred             CCCCCCHHHHHhhhhhHHHHHHHH-HHhc-cCCCEEEEECCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHhCCC
Confidence            999999999999999999999774 4455 899999999  459999999999999999 89999999999999999999


Q ss_pred             ceEEcCCCCChhHHHHHHHHcCC-CccEEEEcccChHhHHHHHHHhh-----CC----------CceEEEEcCCCCCcee
Q 018529          216 TDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVH-----DG----------WGVAVLVGVPSKDAVF  279 (354)
Q Consensus       216 ~~v~~~~~~~~~~~~~i~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~-----~~----------~g~~v~~g~~~~~~~~  279 (354)
                      ++++++.+.+  +.+.+++++++ ++|+||||+|++...+.++++++     ++          .|+++.+|... ....
T Consensus       218 ~~~~~~~~~~--~~~~v~~~t~~~g~d~v~d~~g~~~~~~~~~~~l~~~~~r~~G~~~~~G~~~~g~iv~~G~~~-~~~~  294 (379)
T 3iup_A          218 VHVCNAASPT--FMQDLTEALVSTGATIAFDATGGGKLGGQILTCMEAALNKSAREYSRYGSTTHKQVYLYGGLD-TSPT  294 (379)
T ss_dssp             SCEEETTSTT--HHHHHHHHHHHHCCCEEEESCEEESHHHHHHHHHHHHHHTTCCSCCTTCCCSCEEEEECCCSE-EEEE
T ss_pred             cEEEeCCChH--HHHHHHHHhcCCCceEEEECCCchhhHHHHHHhcchhhhccccceeecccccCceEEEecCCC-CCcc
Confidence            9999998765  88999999887 99999999998778888888885     32          04555555432 1222


Q ss_pred             ecchhhhccccEEEEEeccCCC---CCCCH----HHHHHHHHccCCCCCCceeeeeccccH--HHHHHHHhcCCc-eeEE
Q 018529          280 MTKPINVLNERTLKGTFFGNYK---PRTDL----PSVVDMYMNKQLELEKFITHRIPFSEI--NKAFEYMVKGEG-LRCI  349 (354)
Q Consensus       280 ~~~~~~~~~~~~i~g~~~~~~~---~~~~~----~~~~~~~~~~~~~~~~~v~~~~~l~~~--~~a~~~~~~~~~-~k~v  349 (354)
                      .+. ..+.+++++.|+++..+.   ..+++    +++++++.+   .+.+.++++|+|+++  ++||+.+.+++. +|+|
T Consensus       295 ~~~-~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~l~~~i~~~~~l~~~~~~~A~~~l~~~~~~gKvV  370 (379)
T 3iup_A          295 EFN-RNFGMAWGMGGWLLFPFLQKIGRERANALKQRVVAELKT---TFASHYSKEISLAEVLDLDMIAVYNKRATGEKYL  370 (379)
T ss_dssp             EEC-CCSCSCEEEEECCHHHHHHHHCHHHHHHHHHHHHHTTTT---TTCCCCSEEEEHHHHTCHHHHHHHTTCCTTCCEE
T ss_pred             ccc-cccccceEEEEEEeeeecccCCHHHHHHHHHHHHHHHhc---cCCCcceEEecHHHhhhHHHHHHHhcCCCCceEE
Confidence            232 224588999998765431   11223    444454444   355678899999999  999999988765 7999


Q ss_pred             EecC
Q 018529          350 ISME  353 (354)
Q Consensus       350 i~~~  353 (354)
                      |+++
T Consensus       371 v~~~  374 (379)
T 3iup_A          371 INPN  374 (379)
T ss_dssp             EETT
T ss_pred             EeCC
Confidence            9875

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=100.00  E-value=1.5e-48  Score=355.99  Aligned_cols=316  Identities=16%  Similarity=0.216  Sum_probs=262.3

Q ss_pred             cccchhcceeee-ccC---C----CceEEEEeecCCC-CCCeEEEEEeeeecCccchhhhccC----CC-CCCCCccccc
Q 018529            5 AGLILTCKAAVA-WEA---G----KPLIIQDVEVAPP-QAMEVRIKIKYTSLCRTDLYFWESK----GQ-TPLFPRIFGH   70 (354)
Q Consensus         5 ~~~~~~~~a~~~-~~~---~----~~l~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~~~----~~-~~~~p~~~G~   70 (354)
                      .++|++|||+++ ..+   +    +.++++++|.|+| ++|||+|||.++|||++|+..+.+.    .. ...+|.++||
T Consensus         3 ~~~~~~mka~v~~~~~~~~g~p~~~~l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~~~~g~~~~~~~~~p~v~G~   82 (357)
T 2zb4_A            3 AAAAMIVQRVVLNSRPGKNGNPVAENFRMEEVYLPDNINEGQVQVRTLYLSVDPYMRCRMNEDTGTDYITPWQLSQVVDG   82 (357)
T ss_dssp             ---CCEEEEEEECCCCCTTSCCCGGGEEEEEEECCSCCCTTEEEEEEEEEECCTTHHHHTSSSCSSSSSCCCCBTSBCEE
T ss_pred             CcccccceEEEEeccCCCCCCCCcCceEEEeecCCCCCCCCeEEEEEEEEecCHHHHhhccccccccccCCCCCCccccc
Confidence            358899999999 555   4    3399999999999 9999999999999999998877652    21 2356889999


Q ss_pred             ceeEEEEEeCCCCCCCCCCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCC-----Ccc
Q 018529           71 EAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLA-----PLD  145 (354)
Q Consensus        71 e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~-----~~~  145 (354)
                      |++|+|++  +++++|++||||++.                         .|+|+||+.+|++.++++|+++     +++
T Consensus        83 E~~G~V~~--~~v~~~~vGdrV~~~-------------------------~G~~aey~~v~~~~~~~iP~~~~~~~~~~~  135 (357)
T 2zb4_A           83 GGIGIIEE--SKHTNLTKGDFVTSF-------------------------YWPWQTKVILDGNSLEKVDPQLVDGHLSYF  135 (357)
T ss_dssp             EEEEEEEE--ECSTTCCTTCEEEEE-------------------------EEESBSEEEEEGGGCEECCGGGGTTCGGGG
T ss_pred             cEEEEEEe--cCCCCCCCCCEEEec-------------------------CCCcEEEEEEchHHceecCcccccCchhHH
Confidence            99999999  889999999999865                         2799999999999999999999     555


Q ss_pred             chhhcccchhhhhhhhhhhcCCCCC--CeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh-cCCceEEcC
Q 018529          146 KVCILSCGVSTGLGATLNVAKPERG--SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNT  221 (354)
Q Consensus       146 ~aa~l~~~~~~a~~~l~~~~~~~~~--~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~-lg~~~v~~~  221 (354)
                       +++++++++|||+++.+.+++++|  ++|||+|+ |++|++++|+|+..|+.+|+++++++++.+.+++ +|++.++++
T Consensus       136 -~a~l~~~~~ta~~al~~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~~~~~d~  214 (357)
T 2zb4_A          136 -LGAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDAAINY  214 (357)
T ss_dssp             -GTTTSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCCSEEEET
T ss_pred             -HHhcccHHHHHHHHHHHhcCCCCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCceEEec
Confidence             778888999999998788999999  99999997 9999999999999998789999999999999887 999999988


Q ss_pred             CCCChhHHHHHHHHcCCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCC-ceeecc--------hhhhccccEE
Q 018529          222 SEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD-AVFMTK--------PINVLNERTL  292 (354)
Q Consensus       222 ~~~~~~~~~~i~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~-~~~~~~--------~~~~~~~~~i  292 (354)
                      .+.+  +.+.+++.+.+++|++||++|+ ..++.++++++++ |+++.+|..... ...++.        ...+.+++++
T Consensus       215 ~~~~--~~~~~~~~~~~~~d~vi~~~G~-~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  290 (357)
T 2zb4_A          215 KKDN--VAEQLRESCPAGVDVYFDNVGG-NISDTVISQMNEN-SHIILCGQISQYNKDVPYPPPLSPAIEAIQKERNITR  290 (357)
T ss_dssp             TTSC--HHHHHHHHCTTCEEEEEESCCH-HHHHHHHHTEEEE-EEEEECCCGGGTTSCCCSSCCCCHHHHHHHHHHTCEE
T ss_pred             CchH--HHHHHHHhcCCCCCEEEECCCH-HHHHHHHHHhccC-cEEEEECCccccccCccccccchhhhhhhhhcceeEE
Confidence            7754  8888888876689999999997 7899999999997 999999875421 122221        1223488999


Q ss_pred             EEEeccCCC--CCCCHHHHHHHHHccCCCCCCceeeeeccccHHHHHHHHhcCCc-eeEEEecCC
Q 018529          293 KGTFFGNYK--PRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISMED  354 (354)
Q Consensus       293 ~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~~~d  354 (354)
                      .|++...+.  ..++++++++++.+|++++..  ...|+|+++++||+.+.+++. +|+||.+++
T Consensus       291 ~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~--~~~~~l~~~~~A~~~~~~~~~~gKvvi~~~~  353 (357)
T 2zb4_A          291 ERFLVLNYKDKFEPGILQLSQWFKEGKLKIKE--TVINGLENMGAAFQSMMTGGNIGKQIVCISE  353 (357)
T ss_dssp             EECCGGGGGGGHHHHHHHHHHHHHTTCCCCCE--EEEECGGGHHHHHHHHHTTCCSBEEEEECCC
T ss_pred             EEeehhhhhHHHHHHHHHHHHHHHcCCCcCcc--ceecCHHHHHHHHHHHHcCCCCceEEEEEec
Confidence            998653321  124588999999999888763  456999999999999988764 799998763

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=2e-49  Score=357.63  Aligned_cols=314  Identities=17%  Similarity=0.185  Sum_probs=247.0

Q ss_pred             hcceeeeccCCC--ceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCC-CCCCcccccceeEEEEEeCCCCCCC
Q 018529           10 TCKAAVAWEAGK--PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDL   86 (354)
Q Consensus        10 ~~~a~~~~~~~~--~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~~~~~   86 (354)
                      +|||+++.+++.  .+++++.|.|+|++|||+|||.++|||++|++.+.|..+. ..+|.++|||++|+|+++  ++++|
T Consensus         3 ~mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~~--~v~~~   80 (328)
T 1xa0_A            3 AFQAFVVNKTETEFTAGVQTISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGKIVKTYPFVPGIDLAGVVVSS--QHPRF   80 (328)
T ss_dssp             EEEEEEEEEETTEEEEEEEEEEGGGSCSCSEEEEEEEEECCHHHHHHTSGGGSSCCSSSBCCCSEEEEEEEEC--CSSSC
T ss_pred             cceEEEEecCCCcceeEEEeccCCCCCCCeEEEEEEEEecCHHHHHhhcCCCCCCCCCCcccCcceEEEEEec--CCCCC
Confidence            699999999874  3889999999999999999999999999999998875443 357999999999999996  46789


Q ss_pred             CCCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhh--hh
Q 018529           87 EVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATL--NV  164 (354)
Q Consensus        87 ~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~--~~  164 (354)
                      ++||||++.+..                 .+....|+|+||+.+|++.++++|+++++++|+++++++.|||.++.  +.
T Consensus        81 ~vGdrV~~~~~~-----------------~g~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~  143 (328)
T 1xa0_A           81 REGDEVIATGYE-----------------IGVTHFGGYSEYARLHGEWLVPLPKGLTLKEAMAIGTAGFTAALSIHRLEE  143 (328)
T ss_dssp             CTTCEEEEESTT-----------------BTTTBCCSSBSEEEECGGGCEECCTTCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEcccc-----------------CCCCCCccceeEEEechHHeEECCCCCCHHHhhhhhhhHHHHHHHHHHHhh
Confidence            999999875210                 11123589999999999999999999999999999999999998764  45


Q ss_pred             cCCCCCC-eEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccE
Q 018529          165 AKPERGS-SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDR  242 (354)
Q Consensus       165 ~~~~~~~-~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dv  242 (354)
                      +++++|+ +|||+|+ |++|++++|+|+.+|+ +|++++++++++++++++|+++++++.+.+   .+.+++++.+++|+
T Consensus       144 ~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga-~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~---~~~~~~~~~~~~d~  219 (328)
T 1xa0_A          144 HGLTPERGPVLVTGATGGVGSLAVSMLAKRGY-TVEASTGKAAEHDYLRVLGAKEVLAREDVM---AERIRPLDKQRWAA  219 (328)
T ss_dssp             TTCCGGGCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCTTCHHHHHHTTCSEEEECC------------CCSCCEEE
T ss_pred             cCCCCCCceEEEecCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCcEEEecCCcH---HHHHHHhcCCcccE
Confidence            7899997 9999997 9999999999999999 799999999999999999999999876532   23345555458999


Q ss_pred             EEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhh-hccccEEEEEeccCCCC---CCCHHHHHHHHHccCC
Q 018529          243 SVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNYKP---RTDLPSVVDMYMNKQL  318 (354)
Q Consensus       243 v~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~~---~~~~~~~~~~~~~~~~  318 (354)
                      |||++|+ +.++.++++++++ |+++.+|.... ....+.... +.+++++.|+.......   .+.++.+++++.++ +
T Consensus       220 vid~~g~-~~~~~~~~~l~~~-G~~v~~G~~~~-~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~g-l  295 (328)
T 1xa0_A          220 AVDPVGG-RTLATVLSRMRYG-GAVAVSGLTGG-AEVPTTVHPFILRGVSLLGIDSVYCPMDLRLRIWERLAGDLKPD-L  295 (328)
T ss_dssp             EEECSTT-TTHHHHHHTEEEE-EEEEECSCCSS-SCCCCCSHHHHHTTCEEEECCSSSCCHHHHHHHHHHHHTTTCCC-H
T ss_pred             EEECCcH-HHHHHHHHhhccC-CEEEEEeecCC-CCCCCchhhhhhcCceEEEEecccCCHHHHHHHHHHHHHHHHcC-C
Confidence            9999998 6899999999997 99999997642 122233222 35899999874321110   01233444444444 3


Q ss_pred             CCCCceeeeeccccHHHHHHHHhcCCc-eeEEEecC
Q 018529          319 ELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISME  353 (354)
Q Consensus       319 ~~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~~~  353 (354)
                        .+ ++++|+|+++++||+.+.+++. +|+||+++
T Consensus       296 --~~-~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~  328 (328)
T 1xa0_A          296 --ER-IAQEISLAELPQALKRILRGELRGRTVVRLA  328 (328)
T ss_dssp             --HH-HEEEEEGGGHHHHHHHHHHTCCCSEEEEECC
T ss_pred             --ce-eeeEeCHHHHHHHHHHHHcCCCCCeEEEEeC
Confidence              23 4689999999999999987764 79999863

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=100.00  E-value=1.1e-47  Score=342.29  Aligned_cols=293  Identities=19%  Similarity=0.258  Sum_probs=244.0

Q ss_pred             cceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCC-CCCCcccccceeEEEEEeCCCCCCCCCC
Q 018529           11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLEVG   89 (354)
Q Consensus        11 ~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~~~~~~~G   89 (354)
                      |||+++.+++.+..+++.|.|+|++|||+|||.++|+|++|++++.|..+. ..+|.++|||++|+|+           |
T Consensus         1 Mka~~~~~~g~~~~l~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~e~~G~V~-----------G   69 (302)
T 1iz0_A            1 MKAWVLKRLGGPLELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFIPGMEVVGVVE-----------G   69 (302)
T ss_dssp             CEEEEECSTTSCEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCCEEEEEET-----------T
T ss_pred             CeEEEEcCCCCchheEECCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCcccceEEEEEE-----------C
Confidence            799999999887667799999999999999999999999999999886543 3579999999999997           9


Q ss_pred             CEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhcCCCC
Q 018529           90 DHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPER  169 (354)
Q Consensus        90 d~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~  169 (354)
                      |||++.+                       ..|+|+||+.+|++.++++|+++++++||+++++++|||+++.+.+ +++
T Consensus        70 drV~~~~-----------------------~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~-~~~  125 (302)
T 1iz0_A           70 RRYAALV-----------------------PQGGLAERVAVPKGALLPLPEGLSPEEAAAFPVSFLTAYLALKRAQ-ARP  125 (302)
T ss_dssp             EEEEEEC-----------------------SSCCSBSEEEEEGGGCEECCTTCCHHHHHTSHHHHHHHHHHHHHTT-CCT
T ss_pred             cEEEEec-----------------------CCcceeeEEEEcHHHcEeCCCCCCHHHHHHhhhHHHHHHHHHHHhc-CCC
Confidence            9998762                       3489999999999999999999999999999999999999987677 999


Q ss_pred             CCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCC-CChhHHHHHHHHcCCCccEEEEcc
Q 018529          170 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE-HDRPIQEVIAEMTNGGVDRSVECT  247 (354)
Q Consensus       170 ~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~-~~~~~~~~i~~~~~~~~dvv~d~~  247 (354)
                      |++|||+|+ |++|++++|+|+..|+ +|+++++++++.++++++|++.++++.+ .  ++.+.+     +++|+||| +
T Consensus       126 g~~vlV~Ga~G~vG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~--~~~~~~-----~~~d~vid-~  196 (302)
T 1iz0_A          126 GEKVLVQAAAGALGTAAVQVARAMGL-RVLAAASRPEKLALPLALGAEEAATYAEVP--ERAKAW-----GGLDLVLE-V  196 (302)
T ss_dssp             TCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSGGGSHHHHHTTCSEEEEGGGHH--HHHHHT-----TSEEEEEE-C
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhcCCCEEEECCcch--hHHHHh-----cCceEEEE-C
Confidence            999999998 9999999999999999 9999999999999999999999988754 2  244433     57999999 9


Q ss_pred             cChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchh-hhccccEEEEEeccCC-CCCCCHHHHHH---HHHccCCCCCC
Q 018529          248 GNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI-NVLNERTLKGTFFGNY-KPRTDLPSVVD---MYMNKQLELEK  322 (354)
Q Consensus       248 g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~-~~~~~~~i~g~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~  322 (354)
                      |+ +.++.++++++++ |+++.+|...... ..+... .+.+++++.|++...+ ...++++++++   ++.+|+++  +
T Consensus       197 g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~g~l~--~  271 (302)
T 1iz0_A          197 RG-KEVEESLGLLAHG-GRLVYIGAAEGEV-APIPPLRLMRRNLAVLGFWLTPLLREGALVEEALGFLLPRLGRELR--P  271 (302)
T ss_dssp             SC-TTHHHHHTTEEEE-EEEEEC--------CCCCTTHHHHTTCEEEECCHHHHTTCHHHHHHHHHHHGGGBTTTBC--C
T ss_pred             CH-HHHHHHHHhhccC-CEEEEEeCCCCCC-CCcCHHHHHhCCCeEEEEeccchhhhHHHHHHHHhhhHHHHcCCcc--c
Confidence            98 7899999999997 9999998765321 122222 2458999999875432 12245788889   99899764  5


Q ss_pred             ceeeeeccccHHHHHHHHhcCCc-eeEEEec
Q 018529          323 FITHRIPFSEINKAFEYMVKGEG-LRCIISM  352 (354)
Q Consensus       323 ~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~~  352 (354)
                      .++++|+|+++++||+.+.+++. +|+|+++
T Consensus       272 ~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  302 (302)
T 1iz0_A          272 VVGPVFPFAEAEAAFRALLDRGHTGKVVVRL  302 (302)
T ss_dssp             CEEEEEEGGGHHHHHHHTTCTTCCBEEEEEC
T ss_pred             ccceEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence            68899999999999999988764 7988864

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=100.00  E-value=5.9e-46  Score=335.72  Aligned_cols=309  Identities=16%  Similarity=0.215  Sum_probs=252.2

Q ss_pred             cccchhcceeeeccC--C----CceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEE
Q 018529            5 AGLILTCKAAVAWEA--G----KPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVES   78 (354)
Q Consensus         5 ~~~~~~~~a~~~~~~--~----~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~   78 (354)
                      ++.+|+|||+++.+.  +    +.+++++.|.|+|++|||||||.++|||+.|... .   ....+|.++|||++|+|++
T Consensus         2 ~~~~~~mka~~~~~~~~g~~~~~~l~~~e~~~P~~~~~eVlVkv~a~gi~~~~~~~-~---~~~~~p~~~g~e~~G~Vv~   77 (333)
T 1v3u_A            2 PEFMVKAKSWTLKKHFQGKPTQSDFELKTVELPPLKNGEVLLEALFLSVDPYMRIA-S---KRLKEGAVMMGQQVARVVE   77 (333)
T ss_dssp             --CCCEEEEEEECC-----CCGGGEEEEEEECCCCCTTCEEEEEEEEECCTHHHHH-T---TTCCTTSBCCCCEEEEEEE
T ss_pred             CcccccccEEEEeecCCCCCCccceEEEeCCCCCCCCCEEEEEEEEeccCHHHccc-c---CcCCCCcccccceEEEEEe
Confidence            346789999999885  3    3399999999999999999999999999988732 1   1234678999999999999


Q ss_pred             eCCCCCCCCCCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCC----CCccc-hhhcccc
Q 018529           79 VGEGVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL----APLDK-VCILSCG  153 (354)
Q Consensus        79 vG~~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~----~~~~~-aa~l~~~  153 (354)
                      .  ++++|++||||++.                          |+|+||+.+|++.++++|++    +++++ +++++++
T Consensus        78 ~--~v~~~~vGdrV~~~--------------------------g~~aey~~v~~~~~~~iP~~~~~~~~~~~a~a~l~~~  129 (333)
T 1v3u_A           78 S--KNSAFPAGSIVLAQ--------------------------SGWTTHFISDGKGLEKLLTEWPDKLPLSLALGTIGMP  129 (333)
T ss_dssp             E--SCTTSCTTCEEEEC--------------------------CCSBSEEEESSTTEEECC--CCTTSCGGGGGTTTSHH
T ss_pred             c--CCCCCCCCCEEEec--------------------------CceEEEEEechHHeEEcCcccccCCCHHHHHHHhCCh
Confidence            5  57889999999854                          79999999999999999997    88888 4889999


Q ss_pred             hhhhhhhhhhhcCCCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCC-CChhHHHH
Q 018529          154 VSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE-HDRPIQEV  231 (354)
Q Consensus       154 ~~~a~~~l~~~~~~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~-~~~~~~~~  231 (354)
                      ++|||+++.+.+++++|++|||+|+ |++|++++|+++..|+ +|+++++++++.+.++++|++.++++.+ .+  +.+.
T Consensus       130 ~~ta~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~-~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~--~~~~  206 (333)
T 1v3u_A          130 GLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKIAYLKQIGFDAAFNYKTVNS--LEEA  206 (333)
T ss_dssp             HHHHHHHHHTTSCCCSSCEEEEESTTBHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSEEEETTSCSC--HHHH
T ss_pred             HHHHHHHHHHhhCCCCCCEEEEecCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhcCCcEEEecCCHHH--HHHH
Confidence            9999999878899999999999997 9999999999999999 9999999999999999999998888876 44  7788


Q ss_pred             HHHHcCCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCc----ee-ecchh-hhccccEEEEEeccCCCC---
Q 018529          232 IAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA----VF-MTKPI-NVLNERTLKGTFFGNYKP---  302 (354)
Q Consensus       232 i~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~----~~-~~~~~-~~~~~~~i~g~~~~~~~~---  302 (354)
                      +.+.+.+++|++||++|. ..++.++++++++ |+++.+|......    .. ..... .+.+++++.|++...+..   
T Consensus       207 ~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~  284 (333)
T 1v3u_A          207 LKKASPDGYDCYFDNVGG-EFLNTVLSQMKDF-GKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYRWQGDVR  284 (333)
T ss_dssp             HHHHCTTCEEEEEESSCH-HHHHHHHTTEEEE-EEEEECCCCC-------CCBCCCHHHHHHTTCEEEECCGGGCCTHHH
T ss_pred             HHHHhCCCCeEEEECCCh-HHHHHHHHHHhcC-CEEEEEeccccccCCCCCCCCcCHHHHhhcCceEEEEehhhcchHHH
Confidence            888776689999999998 6789999999997 9999999764311    11 11222 234899999987644321   


Q ss_pred             CCCHHHHHHHHHccCCCCCCceeeeeccccHHHHHHHHhcCCc-eeEEEec
Q 018529          303 RTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM  352 (354)
Q Consensus       303 ~~~~~~~~~~~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~~  352 (354)
                      .++++++++++.+|++++...  ..++|+++++||+.+.+++. +|+||.+
T Consensus       285 ~~~~~~~~~l~~~g~l~~~~~--~~~~l~~~~~A~~~~~~~~~~gKvvl~~  333 (333)
T 1v3u_A          285 EKALRDLMKWVLEGKIQYHEH--VTKGFENMPAAFIEMLNGANLGKAVVTA  333 (333)
T ss_dssp             HHHHHHHHHHHHTTSSCCCEE--EEECGGGHHHHHHHHHTTCCSBEEEEEC
T ss_pred             HHHHHHHHHHHHCCCccCccc--cccCHHHHHHHHHHHHcCCCCceEEEeC
Confidence            235678999999998877643  45799999999999988764 7998864

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=100.00  E-value=6.9e-47  Score=374.50  Aligned_cols=303  Identities=19%  Similarity=0.220  Sum_probs=255.0

Q ss_pred             eeeeccCCCc--eEEEEeec--CCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCCC
Q 018529           13 AAVAWEAGKP--LIIQDVEV--APPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEV   88 (354)
Q Consensus        13 a~~~~~~~~~--l~~~~~~~--p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~   88 (354)
                      .+.+..+|.+  +++.+.+.  |+|++|||+|||.++|||++|++++.|..+   .|.++|||++|+|+++|+++++|++
T Consensus       212 ~l~~~~~G~~~~L~~~~~~~p~~~~~~~eVlV~V~a~gin~~D~~~~~G~~~---~~~~lG~E~aG~V~~vG~~V~~~~v  288 (795)
T 3slk_A          212 RLEATRPGSLDGLALVDEPTATAPLGDGEVRIAMRAAGVNFRDALIALGMYP---GVASLGSEGAGVVVETGPGVTGLAP  288 (795)
T ss_dssp             CEEESSTTSSTTEEECCCHHHHSCCCSSEEEEEEEEEEECHHHHHHTTTCCS---SCCCSCCCEEEEEEEECSSCCSSCT
T ss_pred             EEecCCCCCccceEEEeCCccCCCCCCCEEEEEEEEEccCHHHHHHHcCCCC---CCccccceeEEEEEEeCCCCCcCCC
Confidence            3445555554  88887774  568999999999999999999999888553   3567999999999999999999999


Q ss_pred             CCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhcCCC
Q 018529           89 GDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPE  168 (354)
Q Consensus        89 Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~~~~  168 (354)
                      ||||++.                        ..|+|+||+.++++.++++|+++++++||+++++++|||+++.+.++++
T Consensus       289 GDrV~~~------------------------~~G~~ae~~~v~~~~~~~iP~~ls~~~AA~l~~~~~Ta~~al~~~a~l~  344 (795)
T 3slk_A          289 GDRVMGM------------------------IPKAFGPLAVADHRMVTRIPAGWSFARAASVPIVFLTAYYALVDLAGLR  344 (795)
T ss_dssp             TCEEEEC------------------------CSSCSSSEEEEETTSEEECCTTCCHHHHHHHHHHHHHHHCCCCCCTCCC
T ss_pred             CCEEEEE------------------------ecCCCcCEEEeehHHEEECCCCCCHHHHHhhhHHHHHHHHHHHHHhCCC
Confidence            9999865                        3489999999999999999999999999999999999999988899999


Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC-CccEEEEc
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVEC  246 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~~dvv~d~  246 (354)
                      +|++|||+|+ |++|++++|+|+.+|+ +|+++++++ +.++++ +|+++++++.+.+  +.+.+++.+++ |+|+|||+
T Consensus       345 ~G~~VLI~gaaGgvG~~aiqlAk~~Ga-~V~~t~~~~-k~~~l~-lga~~v~~~~~~~--~~~~i~~~t~g~GvDvVld~  419 (795)
T 3slk_A          345 PGESLLVHSAAGGVGMAAIQLARHLGA-EVYATASED-KWQAVE-LSREHLASSRTCD--FEQQFLGATGGRGVDVVLNS  419 (795)
T ss_dssp             TTCCEEEESTTBHHHHHHHHHHHHTTC-CEEEECCGG-GGGGSC-SCGGGEECSSSST--HHHHHHHHSCSSCCSEEEEC
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHcCC-EEEEEeChH-Hhhhhh-cChhheeecCChh--HHHHHHHHcCCCCeEEEEEC
Confidence            9999999996 9999999999999999 899987665 666666 9999999988776  99999999998 99999999


Q ss_pred             ccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhhccccEEEEEeccCCC---CCCCHHHHHHHHHccCCCCCCc
Q 018529          247 TGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYK---PRTDLPSVVDMYMNKQLELEKF  323 (354)
Q Consensus       247 ~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~  323 (354)
                      +|+ +.++.++++++++ |+++.+|.........+  ....+++++.++.+....   ..+.++++++++.+|++++  .
T Consensus       420 ~gg-~~~~~~l~~l~~~-Gr~v~iG~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~l~~~g~l~p--~  493 (795)
T 3slk_A          420 LAG-EFADASLRMLPRG-GRFLELGKTDVRDPVEV--ADAHPGVSYQAFDTVEAGPQRIGEMLHELVELFEGRVLEP--L  493 (795)
T ss_dssp             CCT-TTTHHHHTSCTTC-EEEEECCSTTCCCHHHH--HHHSSSEEEEECCGGGGHHHHHHHHHHHHHHHHHTTSCCC--C
T ss_pred             CCc-HHHHHHHHHhcCC-CEEEEeccccccCcccc--cccCCCCEEEEeeccccCHHHHHHHHHHHHHHHHcCCcCC--C
Confidence            998 7889999999997 99999997643222111  112367777766542111   1245788999999997765  4


Q ss_pred             eeeeeccccHHHHHHHHhcCCc-eeEEEecC
Q 018529          324 ITHRIPFSEINKAFEYMVKGEG-LRCIISME  353 (354)
Q Consensus       324 v~~~~~l~~~~~a~~~~~~~~~-~k~vi~~~  353 (354)
                      ++++|+++++++||+.+.+++. +|+||+++
T Consensus       494 ~~~~~~l~~~~eA~~~l~~g~~~GKvVl~~~  524 (795)
T 3slk_A          494 PVTAWDVRQAPEALRHLSQARHVGKLVLTMP  524 (795)
T ss_dssp             CEEEEEGGGHHHHHHHHHHTCCCBEEEEECC
T ss_pred             cceeEcHHHHHHHHHHHhcCCccceEEEecC
Confidence            7899999999999999988876 69999875

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=100.00  E-value=4.8e-45  Score=331.41  Aligned_cols=313  Identities=18%  Similarity=0.188  Sum_probs=249.5

Q ss_pred             chhcceeeecc-----CCC-ceEEE--EeecCC-CCCCeEEEEEeeeecCccchhhhccCCCC----CCCCcccccceeE
Q 018529            8 ILTCKAAVAWE-----AGK-PLIIQ--DVEVAP-PQAMEVRIKIKYTSLCRTDLYFWESKGQT----PLFPRIFGHEAAG   74 (354)
Q Consensus         8 ~~~~~a~~~~~-----~~~-~l~~~--~~~~p~-~~~~evlV~v~~~~i~~~D~~~~~~~~~~----~~~p~~~G~e~~G   74 (354)
                      |+|||++++..     ++. .++++  +++.|. |++|||||||.++|+|+.|. ...|....    ..+|+++|||++|
T Consensus         2 ~~~mka~~m~a~~~~~p~~~~l~~~~~~~~~P~~~~~~eVlVkv~a~g~~~~~~-~~~g~~~~~~~~~~~p~v~G~e~~G   80 (345)
T 2j3h_A            2 TATNKQVILKDYVSGFPTESDFDFTTTTVELRVPEGTNSVLVKNLYLSCDPYMR-IRMGKPDPSTAALAQAYTPGQPIQG   80 (345)
T ss_dssp             EEEEEEEEECSCBSSSCCGGGEEEEEEEEECCSCSSSSCEEEEECEEECCTTHH-HHHBC---------CCCCTTSBCEE
T ss_pred             CccceEEEEecCCCCCCCccceeEEEeecCCCCCCCCCEEEEEEEEecCCHHHH-hhcccCCCCccccCCCcCCCCeeec
Confidence            34566666554     443 38888  888887 89999999999999888774 34453322    2468999999999


Q ss_pred             EEEE--eCCCCCCCCCCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccc--eEECCC---CCCccch
Q 018529           75 VVES--VGEGVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGC--VAKINP---LAPLDKV  147 (354)
Q Consensus        75 ~V~~--vG~~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~--~~~~P~---~~~~~~a  147 (354)
                      ++++  +|+++++|++||||++.                          |+|+||+.++++.  ++++|+   .++++ +
T Consensus        81 ~~~~GvV~~~v~~~~vGdrV~~~--------------------------g~~aey~~v~~~~~~~~~ip~~~~~~~~~-a  133 (345)
T 2j3h_A           81 YGVSRIIESGHPDYKKGDLLWGI--------------------------VAWEEYSVITPMTHAHFKIQHTDVPLSYY-T  133 (345)
T ss_dssp             EEEEEEEEECSTTCCTTCEEEEE--------------------------EESBSEEEECCCTTTCEEECCCSSCTTGG-G
T ss_pred             ceEEEEEecCCCCCCCCCEEEee--------------------------cCceeEEEecccccceeecCCCCCCHHHH-H
Confidence            9999  99999999999999854                          7899999999876  999996   35555 6


Q ss_pred             hhcccchhhhhhhhhhhcCCCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH-hcCCceEEcCCCCC
Q 018529          148 CILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTDFVNTSEHD  225 (354)
Q Consensus       148 a~l~~~~~~a~~~l~~~~~~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~-~lg~~~v~~~~~~~  225 (354)
                      |+++++++|||+++.+.+++++|++|||+|+ |++|++++|+|+..|+ +|+++++++++.++++ ++|++.++++.+.+
T Consensus       134 a~l~~~~~ta~~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~-~V~~~~~~~~~~~~~~~~~g~~~~~d~~~~~  212 (345)
T 2j3h_A          134 GLLGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMGC-YVVGSAGSKEKVDLLKTKFGFDDAFNYKEES  212 (345)
T ss_dssp             TTTSHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTSCCSEEEETTSCS
T ss_pred             HhccccHHHHHHHHHHHhCCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCceEEecCCHH
Confidence            7888899999999878899999999999997 9999999999999999 8999999999999998 79999999887531


Q ss_pred             hhHHHHHHHHcCCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCC----ceeecchh-hhccccEEEEEeccCC
Q 018529          226 RPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD----AVFMTKPI-NVLNERTLKGTFFGNY  300 (354)
Q Consensus       226 ~~~~~~i~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~----~~~~~~~~-~~~~~~~i~g~~~~~~  300 (354)
                       ++.+.+++.+++++|++||++|+ ..++.++++++++ |+++.+|.....    ....+... .+.+++++.|++...+
T Consensus       213 -~~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~  289 (345)
T 2j3h_A          213 -DLTAALKRCFPNGIDIYFENVGG-KMLDAVLVNMNMH-GRIAVCGMISQYNLENQEGVHNLSNIIYKRNRIQGFVVSDF  289 (345)
T ss_dssp             -CSHHHHHHHCTTCEEEEEESSCH-HHHHHHHTTEEEE-EEEEECCCGGGTTCSSCCCBSCTTHHHHHTCEEEECCGGGG
T ss_pred             -HHHHHHHHHhCCCCcEEEECCCH-HHHHHHHHHHhcC-CEEEEEccccccccCCccccccHHHHhhhceeeceeeehhh
Confidence             26677777775689999999998 7899999999997 999999875421    01122222 2348899998765432


Q ss_pred             CC--CCCHHHHHHHHHccCCCCCCceeeeeccccHHHHHHHHhcCCc-eeEEEecCC
Q 018529          301 KP--RTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISMED  354 (354)
Q Consensus       301 ~~--~~~~~~~~~~~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~~~d  354 (354)
                      ..  .+.++++++++.+|++++  .+.++|+|+++++||+.+.+++. +|+||.+++
T Consensus       290 ~~~~~~~~~~~~~l~~~g~i~~--~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~~  344 (345)
T 2j3h_A          290 YDKYSKFLEFVLPHIREGKITY--VEDVADGLEKAPEALVGLFHGKNVGKQVVVVAR  344 (345)
T ss_dssp             GGGHHHHHHHHHHHHHTTSSCC--CEEEEESGGGSHHHHHHHHTTCCSSEEEEESSC
T ss_pred             hhhHHHHHHHHHHHHHCCCCcC--cccccCCHHHHHHHHHHHHcCCCceEEEEEeCC
Confidence            11  123788999999997764  46678999999999999988775 699998753

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=100.00  E-value=2.9e-35  Score=319.23  Aligned_cols=291  Identities=16%  Similarity=0.203  Sum_probs=236.4

Q ss_pred             eEEEEeecCC-CC--CCeEEEEEeeeecCccchhhhccCCCCC-------CCCcccccceeEEEEEeCCCCCCCCCCCEE
Q 018529           23 LIIQDVEVAP-PQ--AMEVRIKIKYTSLCRTDLYFWESKGQTP-------LFPRIFGHEAAGVVESVGEGVSDLEVGDHV   92 (354)
Q Consensus        23 l~~~~~~~p~-~~--~~evlV~v~~~~i~~~D~~~~~~~~~~~-------~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V   92 (354)
                      +.+.+.+... +.  ++||+|+|.++|+|+.|+.+..|..+..       ..|.++|+|++|+|          .+||+|
T Consensus      1544 l~~~~~~~~~~~~l~~~eVlVkV~aaglN~~Dv~~~~G~~~~~~~p~~~~~~~~~lG~E~aG~V----------~vGdrV 1613 (2512)
T 2vz8_A         1544 IRWVCSPLHYALPASCQDRLCSVYYTSLNFRDVMLATGKLSPDSIPGKWLTRDCMLGMEFSGRD----------ASGRRV 1613 (2512)
T ss_dssp             EEEEECTTTTCCCHHHHTTEEEEEEEECCHHHHHHHHTSSCGGGCCSCCSCSSSCCCCEEEEEE----------TTSCCE
T ss_pred             eEEEecCcccccCCCCCceEEEEEecccCHHHHHHHhCCCccccccccccccCCceEEEEEEEE----------ccCCEE
Confidence            5666555433 22  7899999999999999999988865421       23578999999987          379999


Q ss_pred             EecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhcCCCCCCe
Q 018529           93 LPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSS  172 (354)
Q Consensus        93 ~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~  172 (354)
                      ++..                       ..|+|+||+++|++.++++|+++++++||+++++++|||+++.+.+++++|++
T Consensus      1614 ~g~~-----------------------~~G~~Aeyv~vp~~~v~~iPd~ls~~eAA~lp~~~~TA~~al~~~a~l~~Ge~ 1670 (2512)
T 2vz8_A         1614 MGMV-----------------------PAEGLATSVLLLQHATWEVPSTWTLEEAASVPIVYTTAYYSLVVRGRMQPGES 1670 (2512)
T ss_dssp             EEEC-----------------------SSCCSBSEEECCGGGEEECCTTSCHHHHTTSHHHHHHHHHHHTTTTCCCTTCE
T ss_pred             EEee-----------------------cCCceeeEEEcccceEEEeCCCCCHHHHHHhHHHHHHHHHHHHHHhcCCCCCE
Confidence            8761                       34899999999999999999999999999999999999999888899999999


Q ss_pred             EEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCceEEcCCCCChhHHHHHHHHcCC-CccEEEEc
Q 018529          173 VAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVEC  246 (354)
Q Consensus       173 vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~~~~~-~~dvv~d~  246 (354)
                      |||+|+ |++|++++|+|+.+|+ +|+++++++++.+++++    +|+++++++.+.+  +.+.+++.+++ |+|+|||+
T Consensus      1671 VLI~gaaGgVG~aAiqlAk~~Ga-~Viat~~s~~k~~~l~~~~~~lga~~v~~~~~~~--~~~~i~~~t~g~GvDvVld~ 1747 (2512)
T 2vz8_A         1671 VLIHSGSGGVGQAAIAIALSRGC-RVFTTVGSAEKRAYLQARFPQLDETCFANSRDTS--FEQHVLRHTAGKGVDLVLNS 1747 (2512)
T ss_dssp             EEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCTTCCSTTEEESSSSH--HHHHHHHTTTSCCEEEEEEC
T ss_pred             EEEEeCChHHHHHHHHHHHHcCC-EEEEEeCChhhhHHHHhhcCCCCceEEecCCCHH--HHHHHHHhcCCCCceEEEEC
Confidence            999986 9999999999999999 89999999999999986    7889999887654  88899999888 99999999


Q ss_pred             ccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhhccccEEEEEeccCCCC--CCCHHHHHHHHH----ccCCCC
Q 018529          247 TGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKP--RTDLPSVVDMYM----NKQLEL  320 (354)
Q Consensus       247 ~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~--~~~~~~~~~~~~----~~~~~~  320 (354)
                      +++ +.+..++++++++ |+++.+|..............+.+++++.+++......  .+.++++++++.    +++  +
T Consensus      1748 ~g~-~~l~~~l~~L~~~-Gr~V~iG~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~l~~l~~~~~~g~--l 1823 (2512)
T 2vz8_A         1748 LAE-EKLQASVRCLAQH-GRFLEIGKFDLSNNHALGMAVFLKNVTFHGILLDSLFEEGGATWQEVSELLKAGIQEGV--V 1823 (2512)
T ss_dssp             CCH-HHHHHHHTTEEEE-EEEEECCCHHHHTTCEEEGGGGGGCCEEEECCGGGTTSSCCHHHHHHHHHHHHHHTTTC--S
T ss_pred             CCc-hHHHHHHHhcCCC-cEEEEeecccccccCcccccccccCCcEEEeeHHHHhhhCHHHHHHHHHHHHHHHHcCC--c
Confidence            975 8899999999997 99999985421111112223355899999977643221  234666666654    443  4


Q ss_pred             CCceeeeeccccHHHHHHHHhcCCc-eeEEEecC
Q 018529          321 EKFITHRIPFSEINKAFEYMVKGEG-LRCIISME  353 (354)
Q Consensus       321 ~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~~~  353 (354)
                      .+.++++||++++++||+.+.+++. +|+||+++
T Consensus      1824 ~p~i~~~f~l~ei~eA~~~l~~g~~~GKvVi~~~ 1857 (2512)
T 2vz8_A         1824 QPLKCTVFPRTKVEAAFRYMAQGKHIGKVVIQVR 1857 (2512)
T ss_dssp             CCCCEEEEESSTHHHHHHHHHTTCCSSEEEEECS
T ss_pred             CCCcceEecHHHHHHHHHhhhccCccceEEEECC
Confidence            4567899999999999999998875 69999875

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=99.90  E-value=8.9e-24  Score=176.13  Aligned_cols=184  Identities=20%  Similarity=0.232  Sum_probs=138.3

Q ss_pred             cceEECCCCCCccchhhcccchhhhhhhhhhhcCCCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH
Q 018529          133 GCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK  211 (354)
Q Consensus       133 ~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~  211 (354)
                      +.++++|+++++++||++++++.|||+++.+.+++++|++|||+|+ |++|.+++|+++..|+ +|+++++++++.+.++
T Consensus         2 ~~~~~~P~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~-~V~~~~~~~~~~~~~~   80 (198)
T 1pqw_A            2 DLVVPIPDTLADNEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGA-RIYTTAGSDAKREMLS   80 (198)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHH
T ss_pred             CceeECCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCCCCEEEEeeCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Confidence            4688999999999999999999999999877889999999999995 9999999999999999 8999999999999999


Q ss_pred             hcCCceEEcCCCCChhHHHHHHHHcCC-CccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhhcccc
Q 018529          212 KFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNER  290 (354)
Q Consensus       212 ~lg~~~v~~~~~~~~~~~~~i~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~  290 (354)
                      ++|++.++++.+.+  +.+.+.+.+.+ ++|++||++|. ..++.++++++++ |+++.+|.........+....+.+++
T Consensus        81 ~~g~~~~~d~~~~~--~~~~~~~~~~~~~~D~vi~~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~  156 (198)
T 1pqw_A           81 RLGVEYVGDSRSVD--FADEILELTDGYGVDVVLNSLAG-EAIQRGVQILAPG-GRFIELGKKDVYADASLGLAALAKSA  156 (198)
T ss_dssp             TTCCSEEEETTCST--HHHHHHHHTTTCCEEEEEECCCT-HHHHHHHHTEEEE-EEEEECSCGGGTTTCEEEGGGGTTTC
T ss_pred             HcCCCEEeeCCcHH--HHHHHHHHhCCCCCeEEEECCch-HHHHHHHHHhccC-CEEEEEcCCCCcCcCcCChhHhcCCc
Confidence            99998888877654  77778777765 89999999986 7889999999997 99999987542111112222244788


Q ss_pred             EEEEEec------cCCCCCCCHHHHHHHHHccCCCCC
Q 018529          291 TLKGTFF------GNYKPRTDLPSVVDMYMNKQLELE  321 (354)
Q Consensus       291 ~i~g~~~------~~~~~~~~~~~~~~~~~~~~~~~~  321 (354)
                      ++.++..      ......+.++++++++.+|++++.
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~  193 (198)
T 1pqw_A          157 SFSVVDLDLNLKLQPARYRQLLQHILQHVADGKLEVL  193 (198)
T ss_dssp             EEEECCHHHHHHHCHHHHHHHHHHHHHHHHTTSSCCC
T ss_pred             EEEEEehHHhhccCHHHHHHHHHHHHHHHHcCCccCC
Confidence            8876533      111112467889999999988765

>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}

Probab=99.20  E-value=2.8e-11  Score=103.72  Aligned_cols=168  Identities=11%  Similarity=0.030  Sum_probs=105.9

Q ss_pred             CCCCCEEEecc-------cCCCCCCcccccCCC-CCCcccccccccceeeEEeeccceEECCCCCCccchh-----hccc
Q 018529           86 LEVGDHVLPVF-------TGECGDCRHCRFSIN-GEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVC-----ILSC  152 (354)
Q Consensus        86 ~~~Gd~V~~~~-------~~~~~~c~~c~~~~~-~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa-----~l~~  152 (354)
                      +++||+|++.+       ...|+.|.+|+.+.. .+...+ ...|+..+      ..+++.|+...+.+.+     .+..
T Consensus         4 ~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~G~~~~~~~~g-~~~G~~~~------~~~~~~p~~~~~~~~~~~~~~~~~~   76 (248)
T 2yvl_A            4 FKEGEYVLIRFGEKKFLRKLLPKQSLSVKKSVLKFDEVIG-KPEGVKIN------GFEVYRPTLEEIILLGFERKTQIIY   76 (248)
T ss_dssp             CCTTCEEEEEETTEEEEEECCTTCEEEETTEEEEGGGTTT-CCTTEEET------TEEEECCCHHHHHHHTSCCSSCCCC
T ss_pred             CCCCCEEEEEeCCeEEEEEEcCCCEEecCCceEEHHHhcC-CCCCCEEE------EEEEeCCCHHHHHHhcCcCCCCccc
Confidence            89999999998       778888888875542 221111 11132222      3334444322222111     1111


Q ss_pred             chhhhhhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhc----CC-ceEEcCCCCChh
Q 018529          153 GVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF----GV-TDFVNTSEHDRP  227 (354)
Q Consensus       153 ~~~~a~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~l----g~-~~v~~~~~~~~~  227 (354)
                      +...+ . +.....++++++||.+|+| .|..+..+++. +. +|++++.+++..+.+++.    +. ..+-.... +  
T Consensus        77 ~~~~~-~-~~~~~~~~~~~~vldiG~G-~G~~~~~l~~~-~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~-d--  148 (248)
T 2yvl_A           77 PKDSF-Y-IALKLNLNKEKRVLEFGTG-SGALLAVLSEV-AG-EVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNV-D--  148 (248)
T ss_dssp             HHHHH-H-HHHHTTCCTTCEEEEECCT-TSHHHHHHHHH-SS-EEEEECSCHHHHHHHHHHHHHTTCCTTEEEECS-C--
T ss_pred             chhHH-H-HHHhcCCCCCCEEEEeCCC-ccHHHHHHHHh-CC-EEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEc-C--
Confidence            22222 2 3466788999999999998 69999999998 66 999999999998887653    43 22211111 1  


Q ss_pred             HHHHHHHH-cCCCccEEEEcccCh-HhHHHHHHHhhCCCceEEEEcC
Q 018529          228 IQEVIAEM-TNGGVDRSVECTGNI-DNMISAFECVHDGWGVAVLVGV  272 (354)
Q Consensus       228 ~~~~i~~~-~~~~~dvv~d~~g~~-~~~~~~~~~l~~~~g~~v~~g~  272 (354)
                      +.+   .. ..+++|+|+...+.+ ..++.+.+.|+++ |++++...
T Consensus       149 ~~~---~~~~~~~~D~v~~~~~~~~~~l~~~~~~L~~g-G~l~~~~~  191 (248)
T 2yvl_A          149 FKD---AEVPEGIFHAAFVDVREPWHYLEKVHKSLMEG-APVGFLLP  191 (248)
T ss_dssp             TTT---SCCCTTCBSEEEECSSCGGGGHHHHHHHBCTT-CEEEEEES
T ss_pred             hhh---cccCCCcccEEEECCcCHHHHHHHHHHHcCCC-CEEEEEeC
Confidence            111   01 123799999988776 7899999999997 99887754

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=99.12  E-value=1e-12  Score=120.75  Aligned_cols=182  Identities=17%  Similarity=0.166  Sum_probs=130.6

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccc
Q 018529           67 IFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDK  146 (354)
Q Consensus        67 ~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~  146 (354)
                      ..|++.++.|..+|++++++.+|+.++.-+...              ........|++++|+..+...++.+|+.++.+.
T Consensus        76 ~~g~~a~~~i~~v~~Glds~~vGe~~Il~qvk~--------------~~~~~~~~G~~~~~~~~~~~~a~~~~k~v~~~~  141 (404)
T 1gpj_A           76 KRGSEAVRHLFRVASGLESMMVGEQEILRQVKK--------------AYDRAARLGTLDEALKIVFRRAINLGKRAREET  141 (404)
T ss_dssp             EEHHHHHHHHHHHHTTTTSSSTTCHHHHHHHHH--------------HHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHS
T ss_pred             ecCchHhhhheeeccCCCCCcCCcchhHHHHHH--------------HHHHHHHcCCchHHHHHHHHHHhhhhccCcchh
Confidence            468999999999999999999999874211000              000012347789999888889999999888777


Q ss_pred             hhhcccchhhhhhhhhhhc---CCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhH-HHHHhcCCceEEcCC
Q 018529          147 VCILSCGVSTGLGATLNVA---KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRF-EEAKKFGVTDFVNTS  222 (354)
Q Consensus       147 aa~l~~~~~~a~~~l~~~~---~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~-~~~~~lg~~~v~~~~  222 (354)
                      ++. ..++.++|.++....   .-.+|++|+|+|+|.+|.++++.++..|+.+|++++++.++. ++++++|++ ++++.
T Consensus       142 ~~~-~~~~s~a~~av~~a~~~~~~l~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g~~-~~~~~  219 (404)
T 1gpj_A          142 RIS-EGAVSIGSAAVELAERELGSLHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGE-AVRFD  219 (404)
T ss_dssp             STT-CSCCSHHHHHHHHHHHHHSCCTTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCE-ECCGG
T ss_pred             hhc-CCCccHHHHHHHHHHHHhccccCCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCc-eecHH
Confidence            665 447778887753222   125899999999999999999999999988899999999886 677889975 33322


Q ss_pred             CCChhHHHHHHHHcCCCccEEEEcccChHhHH--HHHHH--h--hCCCceEEEEcCCC
Q 018529          223 EHDRPIQEVIAEMTNGGVDRSVECTGNIDNMI--SAFEC--V--HDGWGVAVLVGVPS  274 (354)
Q Consensus       223 ~~~~~~~~~i~~~~~~~~dvv~d~~g~~~~~~--~~~~~--l--~~~~g~~v~~g~~~  274 (354)
                          ++.+.+     .++|+|++++|.+..+.  ..+..  +  +++ +..++++...
T Consensus       220 ----~l~~~l-----~~aDvVi~at~~~~~~~~~~~l~~~~lk~r~~-~~~v~vdia~  267 (404)
T 1gpj_A          220 ----ELVDHL-----ARSDVVVSATAAPHPVIHVDDVREALRKRDRR-SPILIIDIAN  267 (404)
T ss_dssp             ----GHHHHH-----HTCSEEEECCSSSSCCBCHHHHHHHHHHCSSC-CCEEEEECCS
T ss_pred             ----hHHHHh-----cCCCEEEEccCCCCceecHHHHHHHHHhccCC-CCEEEEEccC
Confidence                243333     25899999998754432  44554  4  455 6777777654

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=98.71  E-value=2e-08  Score=91.47  Aligned_cols=145  Identities=17%  Similarity=0.188  Sum_probs=95.8

Q ss_pred             CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceE-EcCCCC-------------Ch----hHHH
Q 018529          169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEH-------------DR----PIQE  230 (354)
Q Consensus       169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v-~~~~~~-------------~~----~~~~  230 (354)
                      ++++|+|+|+|.+|++++++|+.+|+ +|+++++++++.+.++++|++.+ ++..+.             ++    ...+
T Consensus       171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga-~V~~~d~~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~~  249 (384)
T 1l7d_A          171 PPARVLVFGVGVAGLQAIATAKRLGA-VVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAE  249 (384)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHH
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEeecccccccccccccchhhcCHHHHhhhHH
Confidence            68999999999999999999999999 79999999999999988998654 222110             00    0122


Q ss_pred             HHHHHcCCCccEEEEcc---cCh--Hh-HHHHHHHhhCCCceEEEEcCCCCCc-eeecchhh-hccccEEEEEeccCCCC
Q 018529          231 VIAEMTNGGVDRSVECT---GNI--DN-MISAFECVHDGWGVAVLVGVPSKDA-VFMTKPIN-VLNERTLKGTFFGNYKP  302 (354)
Q Consensus       231 ~i~~~~~~~~dvv~d~~---g~~--~~-~~~~~~~l~~~~g~~v~~g~~~~~~-~~~~~~~~-~~~~~~i~g~~~~~~~~  302 (354)
                      .+.+... ++|+|++++   |.+  .. .+..++.++++ +.++.++...++. ........ ..+++++.+....   .
T Consensus       250 ~l~~~~~-~aDvVi~~~~~pg~~~~~li~~~~l~~mk~g-~vivdva~~~gg~~~~~~~~~~~~~~~v~i~g~~~~---p  324 (384)
T 1l7d_A          250 AVLKELV-KTDIAITTALIPGKPAPVLITEEMVTKMKPG-SVIIDLAVEAGGNCPLSEPGKIVVKHGVKIVGHTNV---P  324 (384)
T ss_dssp             HHHHHHT-TCSEEEECCCCTTSCCCCCSCHHHHTTSCTT-CEEEETTGGGTCSSTTCCTTCEEEETTEEEECCSSG---G
T ss_pred             HHHHHhC-CCCEEEECCccCCCCCCeeeCHHHHhcCCCC-CEEEEEecCCCCCeecccCCcEEEECCEEEEEeCCC---c
Confidence            2444433 699999999   532  23 36788999997 9999998543221 11111111 2377888775421   1


Q ss_pred             CCCHHHHHHHHHccCCC
Q 018529          303 RTDLPSVVDMYMNKQLE  319 (354)
Q Consensus       303 ~~~~~~~~~~~~~~~~~  319 (354)
                      ......+.+++.++.+.
T Consensus       325 ~~~~~~a~~l~~~~~~~  341 (384)
T 1l7d_A          325 SRVAADASPLFAKNLLN  341 (384)
T ss_dssp             GGGHHHHHHHHHHHHHH
T ss_pred             chhHHHHHHHHHHhHHH
Confidence            12356688888777544

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=98.69  E-value=3.4e-08  Score=89.23  Aligned_cols=96  Identities=23%  Similarity=0.203  Sum_probs=75.4

Q ss_pred             CCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCce--EEcCCCCChhHHHHHHHHcCCCccEEEEcc
Q 018529          170 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD--FVNTSEHDRPIQEVIAEMTNGGVDRSVECT  247 (354)
Q Consensus       170 ~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~--v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~  247 (354)
                      +++|+|+|+|++|.+++++++.+|+ +|+++++++++.+.+++++...  +++...  .++.+.++     ++|+||+|+
T Consensus       167 ~~~VlViGaGgvG~~aa~~a~~~Ga-~V~v~dr~~~r~~~~~~~~~~~~~~~~~~~--~~~~~~~~-----~~DvVI~~~  238 (361)
T 1pjc_A          167 PGKVVILGGGVVGTEAAKMAVGLGA-QVQIFDINVERLSYLETLFGSRVELLYSNS--AEIETAVA-----EADLLIGAV  238 (361)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGSEEEECCH--HHHHHHHH-----TCSEEEECC
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHhhCceeEeeeCCH--HHHHHHHc-----CCCEEEECC
Confidence            4899999999999999999999999 9999999999999998876543  333221  12333332     589999999


Q ss_pred             cChHh------HHHHHHHhhCCCceEEEEcCCC
Q 018529          248 GNIDN------MISAFECVHDGWGVAVLVGVPS  274 (354)
Q Consensus       248 g~~~~------~~~~~~~l~~~~g~~v~~g~~~  274 (354)
                      +.+..      .+..++.++++ |+++.++...
T Consensus       239 ~~~~~~~~~li~~~~~~~~~~g-~~ivdv~~~~  270 (361)
T 1pjc_A          239 LVPGRRAPILVPASLVEQMRTG-SVIVDVAVDQ  270 (361)
T ss_dssp             CCTTSSCCCCBCHHHHTTSCTT-CEEEETTCTT
T ss_pred             CcCCCCCCeecCHHHHhhCCCC-CEEEEEecCC
Confidence            87542      56778899997 9999998754

>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*

Probab=98.54  E-value=3.1e-07  Score=85.49  Aligned_cols=107  Identities=23%  Similarity=0.270  Sum_probs=84.4

Q ss_pred             chhhhhhhhhhhc-CCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHH
Q 018529          153 GVSTGLGATLNVA-KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEV  231 (354)
Q Consensus       153 ~~~~a~~~l~~~~-~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~  231 (354)
                      ...++|+++.+.. ...+|++|+|+|.|.+|..+++.++.+|+ +|+++++++++.+.++++|++ +++       +.+.
T Consensus       256 ~~~s~~~g~~r~~~~~l~GktV~IiG~G~IG~~~A~~lka~Ga-~Viv~d~~~~~~~~A~~~Ga~-~~~-------l~e~  326 (494)
T 3ce6_A          256 TRHSLIDGINRGTDALIGGKKVLICGYGDVGKGCAEAMKGQGA-RVSVTEIDPINALQAMMEGFD-VVT-------VEEA  326 (494)
T ss_dssp             HHHHHHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCE-ECC-------HHHH
T ss_pred             hhhhhhHHHHhccCCCCCcCEEEEEccCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCE-Eec-------HHHH
Confidence            3345566642222 27899999999999999999999999999 999999999999999999985 221       3222


Q ss_pred             HHHHcCCCccEEEEcccChHhHH-HHHHHhhCCCceEEEEcCCC
Q 018529          232 IAEMTNGGVDRSVECTGNIDNMI-SAFECVHDGWGVAVLVGVPS  274 (354)
Q Consensus       232 i~~~~~~~~dvv~d~~g~~~~~~-~~~~~l~~~~g~~v~~g~~~  274 (354)
                      +     .++|+|++++|....+. ..++.++++ ++++.+|...
T Consensus       327 l-----~~aDvVi~atgt~~~i~~~~l~~mk~g-gilvnvG~~~  364 (494)
T 3ce6_A          327 I-----GDADIVVTATGNKDIIMLEHIKAMKDH-AILGNIGHFD  364 (494)
T ss_dssp             G-----GGCSEEEECSSSSCSBCHHHHHHSCTT-CEEEECSSSG
T ss_pred             H-----hCCCEEEECCCCHHHHHHHHHHhcCCC-cEEEEeCCCC
Confidence            2     25899999999877665 788999997 9999998754

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=98.54  E-value=2.8e-07  Score=83.62  Aligned_cols=98  Identities=18%  Similarity=0.174  Sum_probs=75.9

Q ss_pred             CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh-cCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcc
Q 018529          169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  247 (354)
Q Consensus       169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~-lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~  247 (354)
                      ++++|+|+|+|.+|..+++.++.+|+ +|+++++++++.+.+++ +|.....+.... .++.+.++     ++|+|++|+
T Consensus       167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga-~V~~~d~~~~~l~~~~~~~g~~~~~~~~~~-~~l~~~l~-----~aDvVi~~~  239 (377)
T 2vhw_A          167 EPADVVVIGAGTAGYNAARIANGMGA-TVTVLDINIDKLRQLDAEFCGRIHTRYSSA-YELEGAVK-----RADLVIGAV  239 (377)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTTTSSEEEECCH-HHHHHHHH-----HCSEEEECC
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHhcCCeeEeccCCH-HHHHHHHc-----CCCEEEECC
Confidence            58999999999999999999999999 99999999999988877 777533322221 12333332     489999999


Q ss_pred             cChHh------HHHHHHHhhCCCceEEEEcCCC
Q 018529          248 GNIDN------MISAFECVHDGWGVAVLVGVPS  274 (354)
Q Consensus       248 g~~~~------~~~~~~~l~~~~g~~v~~g~~~  274 (354)
                      +.+..      .+..++.++++ +.++.++...
T Consensus       240 ~~p~~~t~~li~~~~l~~mk~g-~~iV~va~~~  271 (377)
T 2vhw_A          240 LVPGAKAPKLVSNSLVAHMKPG-AVLVDIAIDQ  271 (377)
T ss_dssp             CCTTSCCCCCBCHHHHTTSCTT-CEEEEGGGGT
T ss_pred             CcCCCCCcceecHHHHhcCCCC-cEEEEEecCC
Confidence            86543      57788999997 9999998543

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=98.53  E-value=3.9e-07  Score=83.19  Aligned_cols=124  Identities=20%  Similarity=0.163  Sum_probs=84.3

Q ss_pred             CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEE-cCCC-----------CChhH----HHHH
Q 018529          169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFV-NTSE-----------HDRPI----QEVI  232 (354)
Q Consensus       169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~-~~~~-----------~~~~~----~~~i  232 (354)
                      ++++|+|+|+|.+|+.++++|+.+|+ +|++++++.++.+.++++|+..+. +..+           .+.++    .+.+
T Consensus       171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga-~V~v~D~~~~~~~~~~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l  249 (401)
T 1x13_A          171 PPAKVMVIGAGVAGLAAIGAANSLGA-IVRAFDTRPEVKEQVQSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMELF  249 (401)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCGGGHHHHHHTTCEECCC--------CCHHHHHHSHHHHHHHHHHH
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHcCCEEEEecccccccccccchhhccHHHHHHHHHHH
Confidence            58899999999999999999999999 899999999999999999986432 1110           00111    1123


Q ss_pred             HHHcCCCccEEEEcccCh-----Hh-HHHHHHHhhCCCceEEEEcCCCCCceeecc--hh--hhccccEEEEEe
Q 018529          233 AEMTNGGVDRSVECTGNI-----DN-MISAFECVHDGWGVAVLVGVPSKDAVFMTK--PI--NVLNERTLKGTF  296 (354)
Q Consensus       233 ~~~~~~~~dvv~d~~g~~-----~~-~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~--~~--~~~~~~~i~g~~  296 (354)
                      .+... ++|+|+++++.+     .+ .+..++.|+++ +.++.++...++ ..+..  ..  ...+++++.|..
T Consensus       250 ~e~~~-~aDvVI~~~~~pg~~ap~li~~~~l~~mk~g-~vIVdva~~~Gg-~v~~~~~~~p~~~~~gv~i~g~~  320 (401)
T 1x13_A          250 AAQAK-EVDIIVTTALIPGKPAPKLITREMVDSMKAG-SVIVDLAAQNGG-NCEYTVPGEIFTTENGVKVIGYT  320 (401)
T ss_dssp             HHHHH-HCSEEEECCCCTTSCCCCCBCHHHHHTSCTT-CEEEETTGGGTC-SBTTCCTTSEEECTTSCEEECCS
T ss_pred             HHHhC-CCCEEEECCccCCCCCCeeeCHHHHhcCCCC-cEEEEEcCCCCC-CcCcccCCCceEEECCEEEEeeC
Confidence            33322 589999995332     22 36788999997 999999864322 12221  11  234788888754

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.45  E-value=7.5e-07  Score=80.65  Aligned_cols=98  Identities=24%  Similarity=0.245  Sum_probs=72.0

Q ss_pred             CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh-cCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcc
Q 018529          169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  247 (354)
Q Consensus       169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~-lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~  247 (354)
                      ++++|+|+|+|.+|..+++.++.+|+ +|+++++++++.+.+++ +|.....+..+. .++.+.++     ++|+|++++
T Consensus       165 ~~~~V~ViGaG~iG~~~a~~l~~~Ga-~V~~~d~~~~~~~~~~~~~g~~~~~~~~~~-~~l~~~~~-----~~DvVi~~~  237 (369)
T 2eez_A          165 APASVVILGGGTVGTNAAKIALGMGA-QVTILDVNHKRLQYLDDVFGGRVITLTATE-ANIKKSVQ-----HADLLIGAV  237 (369)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTTTSEEEEECCH-HHHHHHHH-----HCSEEEECC
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHhcCceEEEecCCH-HHHHHHHh-----CCCEEEECC
Confidence            46899999999999999999999999 99999999999888766 777533332221 12333332     489999999


Q ss_pred             cChH------hHHHHHHHhhCCCceEEEEcCCC
Q 018529          248 GNID------NMISAFECVHDGWGVAVLVGVPS  274 (354)
Q Consensus       248 g~~~------~~~~~~~~l~~~~g~~v~~g~~~  274 (354)
                      +.+.      ..+..++.++++ |+++.++...
T Consensus       238 g~~~~~~~~li~~~~l~~mk~g-g~iV~v~~~~  269 (369)
T 2eez_A          238 LVPGAKAPKLVTRDMLSLMKEG-AVIVDVAVDQ  269 (369)
T ss_dssp             C-------CCSCHHHHTTSCTT-CEEEECC---
T ss_pred             CCCccccchhHHHHHHHhhcCC-CEEEEEecCC
Confidence            8753      156788899997 9999998754

>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13

Probab=98.35  E-value=1.2e-06  Score=76.19  Aligned_cols=186  Identities=18%  Similarity=0.126  Sum_probs=105.1

Q ss_pred             eCCCCCCCCCCCEEEecccCCCCCCcccccCCC-----CCCcccccccccceeeEEeecc--ceEECCCCCCccchhhcc
Q 018529           79 VGEGVSDLEVGDHVLPVFTGECGDCRHCRFSIN-----GEPVNHFLGTSTFSEYTVVHSG--CVAKINPLAPLDKVCILS  151 (354)
Q Consensus        79 vG~~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~-----~~~~~~~~~~g~~a~~~~v~~~--~~~~~P~~~~~~~aa~l~  151 (354)
                      +|+....++.||+|+..-...+..+-.++.+..     +...........|.+.+.++..  ....-|+...+.++..-.
T Consensus        13 ~~~~~~~~~~gd~v~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~g~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~   92 (277)
T 1o54_A           13 VGKVADTLKPGDRVLLSFEDESEFLVDLEKDKKLHTHLGIIDLNEVFEKGPGEIIRTSAGKKGYILIPSLIDEIMNMKRR   92 (277)
T ss_dssp             CCCGGGCCCTTCEEEEEETTSCEEEEECCTTCEEEETTEEEEHHHHTTSCTTCEEECTTCCEEEEECCCHHHHHHTCCC-
T ss_pred             cccccCCCCCCCEEEEEECCCcEEEEEEcCCCEEecCCceEEHHHhcCCCCCcEEEEcCCcEEEEeCCCHHHHHhhcccc
Confidence            455566799999998874433332222222110     0000001111234444555444  334444432222211100


Q ss_pred             c--chhhhhhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcC-CcEEEEEcCChhhHHHHHh----cCC-ceEEcCCC
Q 018529          152 C--GVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKK----FGV-TDFVNTSE  223 (354)
Q Consensus       152 ~--~~~~a~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g-~~~vi~v~~~~~~~~~~~~----lg~-~~v~~~~~  223 (354)
                      .  .+......+.....++++++||-+|+|. |..++.+++..+ ..+|++++.+++..+.+++    .+. +.+-. ..
T Consensus        93 ~~~~~~~~~~~i~~~~~~~~~~~VLDiG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~-~~  170 (277)
T 1o54_A           93 TQIVYPKDSSFIAMMLDVKEGDRIIDTGVGS-GAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTI-KV  170 (277)
T ss_dssp             CCCCCHHHHHHHHHHTTCCTTCEEEEECCTT-SHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEE-EC
T ss_pred             CCccCHHHHHHHHHHhCCCCCCEEEEECCcC-CHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEE-EE
Confidence            0  0011112234567889999999999987 888999999864 3399999999998888765    354 22211 11


Q ss_pred             CChhHHHHHHHHcCCCccEEEEcccCh-HhHHHHHHHhhCCCceEEEEcC
Q 018529          224 HDRPIQEVIAEMTNGGVDRSVECTGNI-DNMISAFECVHDGWGVAVLVGV  272 (354)
Q Consensus       224 ~~~~~~~~i~~~~~~~~dvv~d~~g~~-~~~~~~~~~l~~~~g~~v~~g~  272 (354)
                      .+  +.+.   +..+.+|+|+...+.+ ..+..+.+.|+++ |++++...
T Consensus       171 ~d--~~~~---~~~~~~D~V~~~~~~~~~~l~~~~~~L~pg-G~l~~~~~  214 (277)
T 1o54_A          171 RD--ISEG---FDEKDVDALFLDVPDPWNYIDKCWEALKGG-GRFATVCP  214 (277)
T ss_dssp             CC--GGGC---CSCCSEEEEEECCSCGGGTHHHHHHHEEEE-EEEEEEES
T ss_pred             CC--HHHc---ccCCccCEEEECCcCHHHHHHHHHHHcCCC-CEEEEEeC
Confidence            11  2111   2224799999877665 6788999999997 99887753

>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*

Probab=98.30  E-value=1.6e-06  Score=75.04  Aligned_cols=101  Identities=15%  Similarity=0.100  Sum_probs=75.8

Q ss_pred             hhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhc----CCceEEcCCCCChhHHHHHHHHcCC
Q 018529          163 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF----GVTDFVNTSEHDRPIQEVIAEMTNG  238 (354)
Q Consensus       163 ~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~l----g~~~v~~~~~~~~~~~~~i~~~~~~  238 (354)
                      ..++++++++||.+|+|+.++.++.+|+..|+ +|++++.+++..+.+++.    |.+.+- +...+  ..    ++..+
T Consensus       116 ~la~l~~g~rVLDIGcG~G~~ta~~lA~~~ga-~V~gIDis~~~l~~Ar~~~~~~gl~~v~-~v~gD--a~----~l~d~  187 (298)
T 3fpf_A          116 ALGRFRRGERAVFIGGGPLPLTGILLSHVYGM-RVNVVEIEPDIAELSRKVIEGLGVDGVN-VITGD--ET----VIDGL  187 (298)
T ss_dssp             HHTTCCTTCEEEEECCCSSCHHHHHHHHTTCC-EEEEEESSHHHHHHHHHHHHHHTCCSEE-EEESC--GG----GGGGC
T ss_pred             HHcCCCCcCEEEEECCCccHHHHHHHHHccCC-EEEEEECCHHHHHHHHHHHHhcCCCCeE-EEECc--hh----hCCCC
Confidence            35789999999999999888888888988898 999999999998888763    543332 11122  11    12235


Q ss_pred             CccEEEEcccCh---HhHHHHHHHhhCCCceEEEEcC
Q 018529          239 GVDRSVECTGNI---DNMISAFECVHDGWGVAVLVGV  272 (354)
Q Consensus       239 ~~dvv~d~~g~~---~~~~~~~~~l~~~~g~~v~~g~  272 (354)
                      .||+|+.....+   ..++.+.+.|+++ |++++...
T Consensus       188 ~FDvV~~~a~~~d~~~~l~el~r~LkPG-G~Lvv~~~  223 (298)
T 3fpf_A          188 EFDVLMVAALAEPKRRVFRNIHRYVDTE-TRIIYRTY  223 (298)
T ss_dssp             CCSEEEECTTCSCHHHHHHHHHHHCCTT-CEEEEEEC
T ss_pred             CcCEEEECCCccCHHHHHHHHHHHcCCC-cEEEEEcC
Confidence            899999765543   5788999999997 99987764

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=98.21  E-value=5e-06  Score=65.38  Aligned_cols=93  Identities=17%  Similarity=0.197  Sum_probs=66.0

Q ss_pred             cCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH-hcCCceEEcCCCCChhHHHHHHHHcCCCccEE
Q 018529          165 AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRS  243 (354)
Q Consensus       165 ~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~-~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv  243 (354)
                      ....++++|+|+|+|.+|...++.++..|. .|+++++++++.+.++ +.|...+ .....+   .+.+.+..-.++|+|
T Consensus        14 ~~~~~~~~v~IiG~G~iG~~la~~L~~~g~-~V~vid~~~~~~~~~~~~~g~~~~-~~d~~~---~~~l~~~~~~~ad~V   88 (155)
T 2g1u_A           14 SKKQKSKYIVIFGCGRLGSLIANLASSSGH-SVVVVDKNEYAFHRLNSEFSGFTV-VGDAAE---FETLKECGMEKADMV   88 (155)
T ss_dssp             ---CCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCGGGGGGSCTTCCSEEE-ESCTTS---HHHHHTTTGGGCSEE
T ss_pred             hcccCCCcEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHhcCCCcEE-EecCCC---HHHHHHcCcccCCEE
Confidence            345678999999999999999999999998 8999999999988877 6776533 222222   123333211369999


Q ss_pred             EEcccChHhHHHHHHHhhC
Q 018529          244 VECTGNIDNMISAFECVHD  262 (354)
Q Consensus       244 ~d~~g~~~~~~~~~~~l~~  262 (354)
                      |.+++.+.....+...++.
T Consensus        89 i~~~~~~~~~~~~~~~~~~  107 (155)
T 2g1u_A           89 FAFTNDDSTNFFISMNARY  107 (155)
T ss_dssp             EECSSCHHHHHHHHHHHHH
T ss_pred             EEEeCCcHHHHHHHHHHHH
Confidence            9999986665555555554

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=98.19  E-value=1.4e-05  Score=59.27  Aligned_cols=94  Identities=17%  Similarity=0.170  Sum_probs=64.2

Q ss_pred             CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEccc
Q 018529          169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  248 (354)
Q Consensus       169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g  248 (354)
                      .+.+|+|+|+|.+|...++.+...|...|+++++++++.+.+...+...+. .+-.+  . +.+.+.. .++|+||++++
T Consensus         4 ~~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~-~d~~~--~-~~~~~~~-~~~d~vi~~~~   78 (118)
T 3ic5_A            4 MRWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDLAALAVLNRMGVATKQ-VDAKD--E-AGLAKAL-GGFDAVISAAP   78 (118)
T ss_dssp             TCEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHTTTCEEEE-CCTTC--H-HHHHHHT-TTCSEEEECSC
T ss_pred             CcCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhCCCcEEE-ecCCC--H-HHHHHHH-cCCCEEEECCC
Confidence            356899999999999999999999933899999999999888877765432 22222  1 2333333 26999999998


Q ss_pred             ChHhHHHHHHHhhCCCceEE
Q 018529          249 NIDNMISAFECVHDGWGVAV  268 (354)
Q Consensus       249 ~~~~~~~~~~~l~~~~g~~v  268 (354)
                      ..........+...+ ..++
T Consensus        79 ~~~~~~~~~~~~~~g-~~~~   97 (118)
T 3ic5_A           79 FFLTPIIAKAAKAAG-AHYF   97 (118)
T ss_dssp             GGGHHHHHHHHHHTT-CEEE
T ss_pred             chhhHHHHHHHHHhC-CCEE
Confidence            644444444445553 4443

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=98.18  E-value=2e-06  Score=76.99  Aligned_cols=104  Identities=19%  Similarity=0.195  Sum_probs=75.8

Q ss_pred             CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcC------CCCC----h----hHHHHHHH
Q 018529          169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT------SEHD----R----PIQEVIAE  234 (354)
Q Consensus       169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~------~~~~----~----~~~~~i~~  234 (354)
                      ++.+|+|+|+|.+|..++++|+.+|+ +|++.+++.++.+.++++|++.+...      ....    +    .-.+.+.+
T Consensus       183 ~~~kV~ViG~G~iG~~aa~~a~~lGa-~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~e  261 (381)
T 3p2y_A          183 KPASALVLGVGVAGLQALATAKRLGA-KTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALED  261 (381)
T ss_dssp             CCCEEEEESCSHHHHHHHHHHHHHTC-EEEEECSSGGGHHHHHHTTCEECCCC-------------CHHHHHHHHHHHHH
T ss_pred             CCCEEEEECchHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHHhhhHHHHHH
Confidence            67899999999999999999999999 89999999999999999998643110      0000    0    01122333


Q ss_pred             HcCCCccEEEEcccChH------hHHHHHHHhhCCCceEEEEcCCCC
Q 018529          235 MTNGGVDRSVECTGNID------NMISAFECVHDGWGVAVLVGVPSK  275 (354)
Q Consensus       235 ~~~~~~dvv~d~~g~~~------~~~~~~~~l~~~~g~~v~~g~~~~  275 (354)
                      .. ..+|+||.++..+.      ..+..++.++++ +.++.++...+
T Consensus       262 ~l-~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpG-sVIVDvA~d~G  306 (381)
T 3p2y_A          262 AI-TKFDIVITTALVPGRPAPRLVTAAAATGMQPG-SVVVDLAGETG  306 (381)
T ss_dssp             HH-TTCSEEEECCCCTTSCCCCCBCHHHHHTSCTT-CEEEETTGGGT
T ss_pred             HH-hcCCEEEECCCCCCcccceeecHHHHhcCCCC-cEEEEEeCCCC
Confidence            32 36899999864321      347889999997 99998886553

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=98.16  E-value=6.8e-06  Score=74.24  Aligned_cols=103  Identities=19%  Similarity=0.218  Sum_probs=74.6

Q ss_pred             CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcC-------------CCC-ChhH----HH
Q 018529          169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT-------------SEH-DRPI----QE  230 (354)
Q Consensus       169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~-------------~~~-~~~~----~~  230 (354)
                      ++.+|+|+|+|.+|+.++++|+.+|+ +|++.+++.++++.++++|.+.+...             ... ..++    .+
T Consensus       189 ~~~kV~ViG~G~iG~~aa~~a~~lGa-~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~  267 (405)
T 4dio_A          189 PAAKIFVMGAGVAGLQAIATARRLGA-VVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQAA  267 (405)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHHHHH
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhhhHh
Confidence            67899999999999999999999999 89999999999999999998532210             000 0001    11


Q ss_pred             HHHHHcCCCccEEEEcccChH------hHHHHHHHhhCCCceEEEEcCCC
Q 018529          231 VIAEMTNGGVDRSVECTGNID------NMISAFECVHDGWGVAVLVGVPS  274 (354)
Q Consensus       231 ~i~~~~~~~~dvv~d~~g~~~------~~~~~~~~l~~~~g~~v~~g~~~  274 (354)
                      .+.+.. .++|+||.++..+.      ..+..++.++++ +.++.++...
T Consensus       268 ~l~e~l-~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~G-sVIVDvA~d~  315 (405)
T 4dio_A          268 LVAEHI-AKQDIVITTALIPGRPAPRLVTREMLDSMKPG-SVVVDLAVER  315 (405)
T ss_dssp             HHHHHH-HTCSEEEECCCCSSSCCCCCBCHHHHTTSCTT-CEEEETTGGG
T ss_pred             HHHHHh-cCCCEEEECCcCCCCCCCEEecHHHHhcCCCC-CEEEEEeCCC
Confidence            233322 26899999964321      356889999997 9999887543

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=98.11  E-value=1.5e-06  Score=67.54  Aligned_cols=107  Identities=16%  Similarity=0.206  Sum_probs=73.1

Q ss_pred             chhhhhhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHH-HHhcCCceEEcCCCCChhHHHH
Q 018529          153 GVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEE-AKKFGVTDFVNTSEHDRPIQEV  231 (354)
Q Consensus       153 ~~~~a~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~-~~~lg~~~v~~~~~~~~~~~~~  231 (354)
                      +++.+++++ +......+++|+|+|+|.+|...++.++..|. .|++.++++++.+. +++++... ....+    +.+.
T Consensus         5 ~~sv~~~a~-~~~~~~~~~~v~iiG~G~iG~~~a~~l~~~g~-~v~v~~r~~~~~~~~a~~~~~~~-~~~~~----~~~~   77 (144)
T 3oj0_A            5 KVSIPSIVY-DIVRKNGGNKILLVGNGMLASEIAPYFSYPQY-KVTVAGRNIDHVRAFAEKYEYEY-VLIND----IDSL   77 (144)
T ss_dssp             CCSHHHHHH-HHHHHHCCCEEEEECCSHHHHHHGGGCCTTTC-EEEEEESCHHHHHHHHHHHTCEE-EECSC----HHHH
T ss_pred             cccHHHHHH-HHHHhccCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCHHHHHHHHHHhCCce-EeecC----HHHH
Confidence            345566664 33333458999999999999999999888998 59999999988764 56678542 22322    4333


Q ss_pred             HHHHcCCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCC
Q 018529          232 IAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVP  273 (354)
Q Consensus       232 i~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~  273 (354)
                      +.     ++|+|+++++.+..... ...++++ +.++.++.+
T Consensus        78 ~~-----~~Divi~at~~~~~~~~-~~~l~~g-~~vid~~~p  112 (144)
T 3oj0_A           78 IK-----NNDVIITATSSKTPIVE-ERSLMPG-KLFIDLGNP  112 (144)
T ss_dssp             HH-----TCSEEEECSCCSSCSBC-GGGCCTT-CEEEECCSS
T ss_pred             hc-----CCCEEEEeCCCCCcEee-HHHcCCC-CEEEEccCC
Confidence            32     48999999987532222 2556675 777777654

>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33

Probab=98.10  E-value=4.4e-06  Score=72.09  Aligned_cols=94  Identities=18%  Similarity=0.175  Sum_probs=69.8

Q ss_pred             CCCCeEEEEcCChhHHHHHHHHHHc-CCcEEEEEcCChhhHHHHHhcCCce-EEcCCCCChhHHHHHHHHcCCCccEEEE
Q 018529          168 ERGSSVAVFGLGAVGLAAAEGARIA-GASRIIGVDRSSKRFEEAKKFGVTD-FVNTSEHDRPIQEVIAEMTNGGVDRSVE  245 (354)
Q Consensus       168 ~~~~~vlI~G~g~~G~~a~~~a~~~-g~~~vi~v~~~~~~~~~~~~lg~~~-v~~~~~~~~~~~~~i~~~~~~~~dvv~d  245 (354)
                      .++.+||.+|+|. |..+..+++.. |. .|++++.+++..+.+++.+... ++..+..+  +     .+..+.+|+|+.
T Consensus        84 ~~~~~vLdiG~G~-G~~~~~l~~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~--~-----~~~~~~fD~v~~  154 (269)
T 1p91_A           84 DKATAVLDIGCGE-GYYTHAFADALPEI-TTFGLDVSKVAIKAAAKRYPQVTFCVASSHR--L-----PFSDTSMDAIIR  154 (269)
T ss_dssp             TTCCEEEEETCTT-STTHHHHHHTCTTS-EEEEEESCHHHHHHHHHHCTTSEEEECCTTS--C-----SBCTTCEEEEEE
T ss_pred             CCCCEEEEECCCC-CHHHHHHHHhCCCC-eEEEEeCCHHHHHHHHHhCCCcEEEEcchhh--C-----CCCCCceeEEEE
Confidence            6789999999988 99999999987 56 9999999999999998765432 22221111  1     012247999996


Q ss_pred             cccChHhHHHHHHHhhCCCceEEEEcC
Q 018529          246 CTGNIDNMISAFECVHDGWGVAVLVGV  272 (354)
Q Consensus       246 ~~g~~~~~~~~~~~l~~~~g~~v~~g~  272 (354)
                      . ..+..+..+.+.|+++ |++++...
T Consensus       155 ~-~~~~~l~~~~~~L~pg-G~l~~~~~  179 (269)
T 1p91_A          155 I-YAPCKAEELARVVKPG-GWVITATP  179 (269)
T ss_dssp             E-SCCCCHHHHHHHEEEE-EEEEEEEE
T ss_pred             e-CChhhHHHHHHhcCCC-cEEEEEEc
Confidence            4 4457899999999997 99887753

>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*

Probab=98.04  E-value=2.3e-05  Score=71.01  Aligned_cols=103  Identities=21%  Similarity=0.257  Sum_probs=78.6

Q ss_pred             hhhhhhhhc-CCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHH
Q 018529          157 GLGATLNVA-KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEM  235 (354)
Q Consensus       157 a~~~l~~~~-~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~  235 (354)
                      .+.++.+.. ..-.|++|+|+|.|.+|...++.++.+|+ +|+++++++.+...+...|... .     +  +.+.+   
T Consensus       206 ~~~gi~rat~~~L~GktV~ViG~G~IGk~vA~~Lra~Ga-~Viv~D~dp~ra~~A~~~G~~v-~-----~--Leeal---  273 (435)
T 3gvp_A          206 ILDGLKRTTDMMFGGKQVVVCGYGEVGKGCCAALKAMGS-IVYVTEIDPICALQACMDGFRL-V-----K--LNEVI---  273 (435)
T ss_dssp             HHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEE-C-----C--HHHHT---
T ss_pred             HHHHHHHhhCceecCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEEeCChhhhHHHHHcCCEe-c-----c--HHHHH---
Confidence            344444433 34689999999999999999999999999 8999999988777777777532 1     1  33322   


Q ss_pred             cCCCccEEEEcccChHhHH-HHHHHhhCCCceEEEEcCCC
Q 018529          236 TNGGVDRSVECTGNIDNMI-SAFECVHDGWGVAVLVGVPS  274 (354)
Q Consensus       236 ~~~~~dvv~d~~g~~~~~~-~~~~~l~~~~g~~v~~g~~~  274 (354)
                        ...|+|+.|.|....+. ..++.++++ +.++.+|...
T Consensus       274 --~~ADIVi~atgt~~lI~~e~l~~MK~g-ailINvgrg~  310 (435)
T 3gvp_A          274 --RQVDIVITCTGNKNVVTREHLDRMKNS-CIVCNMGHSN  310 (435)
T ss_dssp             --TTCSEEEECSSCSCSBCHHHHHHSCTT-EEEEECSSTT
T ss_pred             --hcCCEEEECCCCcccCCHHHHHhcCCC-cEEEEecCCC
Confidence              25899999988766665 889999997 9999888764

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.94  E-value=0.0001  Score=59.52  Aligned_cols=89  Identities=16%  Similarity=0.262  Sum_probs=64.6

Q ss_pred             CCCeEEEEcCChhHHHHHHHHHHc-CCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHH-cCCCccEEEEc
Q 018529          169 RGSSVAVFGLGAVGLAAAEGARIA-GASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEM-TNGGVDRSVEC  246 (354)
Q Consensus       169 ~~~~vlI~G~g~~G~~a~~~a~~~-g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~-~~~~~dvv~d~  246 (354)
                      .+++|+|+|+|.+|...++.++.. |. .|+++++++++.+.+++.|...+.. +..+.   +.+.+. .-.++|+|+.+
T Consensus        38 ~~~~v~IiG~G~~G~~~a~~L~~~~g~-~V~vid~~~~~~~~~~~~g~~~~~g-d~~~~---~~l~~~~~~~~ad~vi~~  112 (183)
T 3c85_A           38 GHAQVLILGMGRIGTGAYDELRARYGK-ISLGIEIREEAAQQHRSEGRNVISG-DATDP---DFWERILDTGHVKLVLLA  112 (183)
T ss_dssp             TTCSEEEECCSHHHHHHHHHHHHHHCS-CEEEEESCHHHHHHHHHTTCCEEEC-CTTCH---HHHHTBCSCCCCCEEEEC
T ss_pred             CCCcEEEECCCHHHHHHHHHHHhccCC-eEEEEECCHHHHHHHHHCCCCEEEc-CCCCH---HHHHhccCCCCCCEEEEe
Confidence            367899999999999999999998 98 8999999999999998888764432 22221   234444 22379999999


Q ss_pred             ccChHhHHHHHHHhhC
Q 018529          247 TGNIDNMISAFECVHD  262 (354)
Q Consensus       247 ~g~~~~~~~~~~~l~~  262 (354)
                      ++.......+...++.
T Consensus       113 ~~~~~~~~~~~~~~~~  128 (183)
T 3c85_A          113 MPHHQGNQTALEQLQR  128 (183)
T ss_dssp             CSSHHHHHHHHHHHHH
T ss_pred             CCChHHHHHHHHHHHH
Confidence            9886544444444443

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=97.91  E-value=4.1e-05  Score=66.87  Aligned_cols=95  Identities=19%  Similarity=0.258  Sum_probs=72.7

Q ss_pred             CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcc
Q 018529          168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  247 (354)
Q Consensus       168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~  247 (354)
                      -+|++|+|+|+|.+|...++.++.+|+ +|++.+++.++.+.++++|+.. ++..    ++.+.+     ...|+|+.++
T Consensus       153 l~g~~v~IiG~G~iG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~-~~~~----~l~~~l-----~~aDvVi~~~  221 (293)
T 3d4o_A          153 IHGANVAVLGLGRVGMSVARKFAALGA-KVKVGARESDLLARIAEMGMEP-FHIS----KAAQEL-----RDVDVCINTI  221 (293)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTSEE-EEGG----GHHHHT-----TTCSEEEECC
T ss_pred             CCCCEEEEEeeCHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHCCCee-cChh----hHHHHh-----cCCCEEEECC
Confidence            468999999999999999999999999 9999999998887777888753 2211    132222     2589999999


Q ss_pred             cChHhHHHHHHHhhCCCceEEEEcCCC
Q 018529          248 GNIDNMISAFECVHDGWGVAVLVGVPS  274 (354)
Q Consensus       248 g~~~~~~~~~~~l~~~~g~~v~~g~~~  274 (354)
                      +..-.-+..++.++++ +.++.++...
T Consensus       222 p~~~i~~~~l~~mk~~-~~lin~ar~~  247 (293)
T 3d4o_A          222 PALVVTANVLAEMPSH-TFVIDLASKP  247 (293)
T ss_dssp             SSCCBCHHHHHHSCTT-CEEEECSSTT
T ss_pred             ChHHhCHHHHHhcCCC-CEEEEecCCC
Confidence            7633334677888997 8998888644

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.89  E-value=0.00018  Score=55.24  Aligned_cols=95  Identities=13%  Similarity=0.100  Sum_probs=66.8

Q ss_pred             CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEccc
Q 018529          169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  248 (354)
Q Consensus       169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g  248 (354)
                      -.++|+|.|+|.+|...++.++..|. .|+++++++++.+.+++.|...+. .+..+.   +.+++..-..+|+++.+++
T Consensus         6 ~~~~viIiG~G~~G~~la~~L~~~g~-~v~vid~~~~~~~~~~~~g~~~i~-gd~~~~---~~l~~a~i~~ad~vi~~~~   80 (140)
T 3fwz_A            6 ICNHALLVGYGRVGSLLGEKLLASDI-PLVVIETSRTRVDELRERGVRAVL-GNAANE---EIMQLAHLECAKWLILTIP   80 (140)
T ss_dssp             CCSCEEEECCSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHTTCEEEE-SCTTSH---HHHHHTTGGGCSEEEECCS
T ss_pred             CCCCEEEECcCHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHcCCCEEE-CCCCCH---HHHHhcCcccCCEEEEECC
Confidence            35789999999999999999999999 999999999999999988886443 222222   2333332237899999998


Q ss_pred             ChHhHH---HHHHHhhCCCceEEE
Q 018529          249 NIDNMI---SAFECVHDGWGVAVL  269 (354)
Q Consensus       249 ~~~~~~---~~~~~l~~~~g~~v~  269 (354)
                      ....-.   ...+.+.+. .+++.
T Consensus        81 ~~~~n~~~~~~a~~~~~~-~~iia  103 (140)
T 3fwz_A           81 NGYEAGEIVASARAKNPD-IEIIA  103 (140)
T ss_dssp             CHHHHHHHHHHHHHHCSS-SEEEE
T ss_pred             ChHHHHHHHHHHHHHCCC-CeEEE
Confidence            754222   233444454 45443

>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13

Probab=97.89  E-value=1.8e-05  Score=70.72  Aligned_cols=104  Identities=18%  Similarity=0.214  Sum_probs=68.9

Q ss_pred             hhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCC-cEEEEEcCChhhHHHHHhc----C-----------Cce--EEcCCC
Q 018529          162 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKKF----G-----------VTD--FVNTSE  223 (354)
Q Consensus       162 ~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~-~~vi~v~~~~~~~~~~~~l----g-----------~~~--v~~~~~  223 (354)
                      .....++++++||-+|+|. |..++.+++..|. .+|++++.+++..+.+++.    |           ...  ++..+-
T Consensus        98 l~~l~~~~g~~VLDiG~G~-G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~  176 (336)
T 2b25_A           98 LSMMDINPGDTVLEAGSGS-GGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDI  176 (336)
T ss_dssp             HHHHTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCT
T ss_pred             HHhcCCCCCCEEEEeCCCc-CHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECCh
Confidence            4456789999999999987 8888889998764 4999999999888877652    1           111  221111


Q ss_pred             CChhHHHHHHHHcCCCccEEEEcccCh-HhHHHHHHHhhCCCceEEEEcC
Q 018529          224 HDRPIQEVIAEMTNGGVDRSVECTGNI-DNMISAFECVHDGWGVAVLVGV  272 (354)
Q Consensus       224 ~~~~~~~~i~~~~~~~~dvv~d~~g~~-~~~~~~~~~l~~~~g~~v~~g~  272 (354)
                      .+  .   ...+..+.+|+|+.....+ ..+..+.+.|+++ |++++...
T Consensus       177 ~~--~---~~~~~~~~fD~V~~~~~~~~~~l~~~~~~Lkpg-G~lv~~~~  220 (336)
T 2b25_A          177 SG--A---TEDIKSLTFDAVALDMLNPHVTLPVFYPHLKHG-GVCAVYVV  220 (336)
T ss_dssp             TC--C---C-------EEEEEECSSSTTTTHHHHGGGEEEE-EEEEEEES
T ss_pred             HH--c---ccccCCCCeeEEEECCCCHHHHHHHHHHhcCCC-cEEEEEeC
Confidence            11  1   1112223699998765543 4588899999997 99987653

>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13

Probab=97.82  E-value=0.00012  Score=63.28  Aligned_cols=105  Identities=21%  Similarity=0.272  Sum_probs=73.4

Q ss_pred             hhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcC-CcEEEEEcCChhhHHHHHhc-----C--CceEEcCCCCChhHHHHH
Q 018529          161 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKKF-----G--VTDFVNTSEHDRPIQEVI  232 (354)
Q Consensus       161 l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g-~~~vi~v~~~~~~~~~~~~l-----g--~~~v~~~~~~~~~~~~~i  232 (354)
                      +.....++++++||-+|+| .|..+..+++..+ ..+|++++.+++..+.+++.     |  .+.+-.. ..+  +.+. 
T Consensus        91 i~~~~~~~~~~~vLdiG~G-~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~-~~d--~~~~-  165 (280)
T 1i9g_A           91 IVHEGDIFPGARVLEAGAG-SGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLV-VSD--LADS-  165 (280)
T ss_dssp             HHHHTTCCTTCEEEEECCT-TSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEE-CSC--GGGC-
T ss_pred             HHHHcCCCCCCEEEEEccc-ccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEE-ECc--hHhc-
Confidence            3456678999999999998 6888999998764 23999999999988877653     4  2222111 111  1110 


Q ss_pred             HHHcCCCccEEEEcccCh-HhHHHHHHHhhCCCceEEEEcC
Q 018529          233 AEMTNGGVDRSVECTGNI-DNMISAFECVHDGWGVAVLVGV  272 (354)
Q Consensus       233 ~~~~~~~~dvv~d~~g~~-~~~~~~~~~l~~~~g~~v~~g~  272 (354)
                       .+..+.+|+|+.....+ ..+..+.+.|+++ |++++...
T Consensus       166 -~~~~~~~D~v~~~~~~~~~~l~~~~~~L~pg-G~l~~~~~  204 (280)
T 1i9g_A          166 -ELPDGSVDRAVLDMLAPWEVLDAVSRLLVAG-GVLMVYVA  204 (280)
T ss_dssp             -CCCTTCEEEEEEESSCGGGGHHHHHHHEEEE-EEEEEEES
T ss_pred             -CCCCCceeEEEECCcCHHHHHHHHHHhCCCC-CEEEEEeC
Confidence             01123799999776655 6788999999997 99887653

>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}

Probab=97.80  E-value=8.3e-05  Score=67.50  Aligned_cols=94  Identities=24%  Similarity=0.233  Sum_probs=74.0

Q ss_pred             CCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEE
Q 018529          166 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVE  245 (354)
Q Consensus       166 ~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d  245 (354)
                      ..-.|++|+|+|.|.+|...++.++.+|+ +|+++++++.+...+...|... .+       +.+.++     ..|+|+.
T Consensus       243 ~~L~GKTVgVIG~G~IGr~vA~~lrafGa-~Viv~d~dp~~a~~A~~~G~~v-v~-------LeElL~-----~ADIVv~  308 (464)
T 3n58_A          243 VMMAGKVAVVCGYGDVGKGSAQSLAGAGA-RVKVTEVDPICALQAAMDGFEV-VT-------LDDAAS-----TADIVVT  308 (464)
T ss_dssp             CCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHTTCEE-CC-------HHHHGG-----GCSEEEE
T ss_pred             CcccCCEEEEECcCHHHHHHHHHHHHCCC-EEEEEeCCcchhhHHHhcCcee-cc-------HHHHHh-----hCCEEEE
Confidence            35689999999999999999999999999 9999998887766666667642 11       333322     4799999


Q ss_pred             cccChHhH-HHHHHHhhCCCceEEEEcCCC
Q 018529          246 CTGNIDNM-ISAFECVHDGWGVAVLVGVPS  274 (354)
Q Consensus       246 ~~g~~~~~-~~~~~~l~~~~g~~v~~g~~~  274 (354)
                      ++|....+ ...+..|+++ +.++.+|...
T Consensus       309 atgt~~lI~~e~l~~MK~G-AILINvGRgd  337 (464)
T 3n58_A          309 TTGNKDVITIDHMRKMKDM-CIVGNIGHFD  337 (464)
T ss_dssp             CCSSSSSBCHHHHHHSCTT-EEEEECSSST
T ss_pred             CCCCccccCHHHHhcCCCC-eEEEEcCCCC
Confidence            99875554 5888999997 9998888754

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=97.77  E-value=5.7e-05  Score=69.66  Aligned_cols=91  Identities=23%  Similarity=0.292  Sum_probs=71.9

Q ss_pred             CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcc
Q 018529          168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  247 (354)
Q Consensus       168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~  247 (354)
                      -.|++++|+|+|.+|.+.++.++..|+ +|+++++++++.+.+...|++ +.+..+           . ...+|+++++.
T Consensus       263 L~GKtVvVtGaGgIG~aiA~~Laa~GA-~Viv~D~~~~~a~~Aa~~g~d-v~~lee-----------~-~~~aDvVi~at  328 (488)
T 3ond_A          263 IAGKVAVVAGYGDVGKGCAAALKQAGA-RVIVTEIDPICALQATMEGLQ-VLTLED-----------V-VSEADIFVTTT  328 (488)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCE-ECCGGG-----------T-TTTCSEEEECS
T ss_pred             ccCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHhCCc-cCCHHH-----------H-HHhcCEEEeCC
Confidence            478999999999999999999999999 999999999888877777763 221111           1 12589999999


Q ss_pred             cChHhHH-HHHHHhhCCCceEEEEcCC
Q 018529          248 GNIDNMI-SAFECVHDGWGVAVLVGVP  273 (354)
Q Consensus       248 g~~~~~~-~~~~~l~~~~g~~v~~g~~  273 (354)
                      |....+. ..++.++++ +.++..|..
T Consensus       329 G~~~vl~~e~l~~mk~g-aiVvNaG~~  354 (488)
T 3ond_A          329 GNKDIIMLDHMKKMKNN-AIVCNIGHF  354 (488)
T ss_dssp             SCSCSBCHHHHTTSCTT-EEEEESSST
T ss_pred             CChhhhhHHHHHhcCCC-eEEEEcCCC
Confidence            9766654 478889997 888888865

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=97.77  E-value=0.00029  Score=54.07  Aligned_cols=77  Identities=18%  Similarity=0.285  Sum_probs=58.6

Q ss_pred             CCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcccC
Q 018529          170 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN  249 (354)
Q Consensus       170 ~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~  249 (354)
                      ..+++|+|+|.+|...++.+...|. .|+++++++++.+.+++.|...+. .+..+.   +.+++..-.++|+|+.+++.
T Consensus         6 ~~~v~I~G~G~iG~~la~~L~~~g~-~V~~id~~~~~~~~~~~~~~~~~~-gd~~~~---~~l~~~~~~~~d~vi~~~~~   80 (141)
T 3llv_A            6 RYEYIVIGSEAAGVGLVRELTAAGK-KVLAVDKSKEKIELLEDEGFDAVI-ADPTDE---SFYRSLDLEGVSAVLITGSD   80 (141)
T ss_dssp             CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHTTCEEEE-CCTTCH---HHHHHSCCTTCSEEEECCSC
T ss_pred             CCEEEEECCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHCCCcEEE-CCCCCH---HHHHhCCcccCCEEEEecCC
Confidence            4689999999999999999999999 899999999999998888865333 322222   23444432379999999997


Q ss_pred             hH
Q 018529          250 ID  251 (354)
Q Consensus       250 ~~  251 (354)
                      .+
T Consensus        81 ~~   82 (141)
T 3llv_A           81 DE   82 (141)
T ss_dssp             HH
T ss_pred             HH
Confidence            43

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=97.77  E-value=7.1e-05  Score=65.61  Aligned_cols=96  Identities=20%  Similarity=0.256  Sum_probs=72.6

Q ss_pred             CCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEc
Q 018529          167 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  246 (354)
Q Consensus       167 ~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~  246 (354)
                      --++.+|+|+|+|.+|..+++.++.+|+ +|++.+++.++.+.+.++|.. ++...    ++.+    +. ...|+|+.+
T Consensus       154 ~l~g~~v~IiG~G~iG~~~a~~l~~~G~-~V~~~d~~~~~~~~~~~~g~~-~~~~~----~l~~----~l-~~aDvVi~~  222 (300)
T 2rir_A          154 TIHGSQVAVLGLGRTGMTIARTFAALGA-NVKVGARSSAHLARITEMGLV-PFHTD----ELKE----HV-KDIDICINT  222 (300)
T ss_dssp             CSTTSEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCE-EEEGG----GHHH----HS-TTCSEEEEC
T ss_pred             CCCCCEEEEEcccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCCe-EEchh----hHHH----Hh-hCCCEEEEC
Confidence            3468999999999999999999999999 999999999888777777764 32221    1322    22 258999999


Q ss_pred             ccChHhHHHHHHHhhCCCceEEEEcCCC
Q 018529          247 TGNIDNMISAFECVHDGWGVAVLVGVPS  274 (354)
Q Consensus       247 ~g~~~~~~~~~~~l~~~~g~~v~~g~~~  274 (354)
                      ++..-.-+..++.++++ +.++.++...
T Consensus       223 ~p~~~i~~~~~~~mk~g-~~lin~a~g~  249 (300)
T 2rir_A          223 IPSMILNQTVLSSMTPK-TLILDLASRP  249 (300)
T ss_dssp             CSSCCBCHHHHTTSCTT-CEEEECSSTT
T ss_pred             CChhhhCHHHHHhCCCC-CEEEEEeCCC
Confidence            98633334567788886 8898888654

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=97.73  E-value=9.6e-05  Score=62.24  Aligned_cols=104  Identities=14%  Similarity=0.127  Sum_probs=68.0

Q ss_pred             CCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCc-eEEcCCCCChhHHHHHHHHcCCCccEEE
Q 018529          167 PERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT-DFVNTSEHDRPIQEVIAEMTNGGVDRSV  244 (354)
Q Consensus       167 ~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~-~v~~~~~~~~~~~~~i~~~~~~~~dvv~  244 (354)
                      +-.|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+....-.+. ...|..+. +++.+.++++  ++.|+++
T Consensus         8 lf~GK~alVTGas~GIG~aia~~la~~Ga-~Vv~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~--g~iDiLV   83 (242)
T 4b79_A            8 IYAGQQVLVTGGSSGIGAAIAMQFAELGA-EVVALGLDADGVHAPRHPRIRREELDITDS-QRLQRLFEAL--PRLDVLV   83 (242)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTTSTTSCCCTTEEEEECCTTCH-HHHHHHHHHC--SCCSEEE
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHhhhhcCCeEEEEecCCCH-HHHHHHHHhc--CCCCEEE
Confidence            347999999987 9999999999999999 999999988776543221111 11233322 2243344433  5799999


Q ss_pred             EcccCh-----------------------HhHHHHHHHhhCCCceEEEEcCCC
Q 018529          245 ECTGNI-----------------------DNMISAFECVHDGWGVAVLVGVPS  274 (354)
Q Consensus       245 d~~g~~-----------------------~~~~~~~~~l~~~~g~~v~~g~~~  274 (354)
                      +++|..                       -..+.+...|+..+|++|.++...
T Consensus        84 NNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~  136 (242)
T 4b79_A           84 NNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASMY  136 (242)
T ss_dssp             ECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCGG
T ss_pred             ECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeecc
Confidence            998842                       122334455554349999998653

>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}

Probab=97.63  E-value=0.00017  Score=59.28  Aligned_cols=102  Identities=21%  Similarity=0.254  Sum_probs=71.2

Q ss_pred             hhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCc-eEEcCCCCChhHHHHHHHHc
Q 018529          162 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT-DFVNTSEHDRPIQEVIAEMT  236 (354)
Q Consensus       162 ~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~-~v~~~~~~~~~~~~~i~~~~  236 (354)
                      .....++++++||-+|+|. |..++.+|+. +. +|++++.+++..+.+++    +|.. .+-....+   +.+.+..  
T Consensus        48 l~~l~~~~~~~vLDlGcG~-G~~~~~la~~-~~-~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d---~~~~~~~--  119 (204)
T 3njr_A           48 LAALAPRRGELLWDIGGGS-GSVSVEWCLA-GG-RAITIEPRADRIENIQKNIDTYGLSPRMRAVQGT---APAALAD--  119 (204)
T ss_dssp             HHHHCCCTTCEEEEETCTT-CHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESC---TTGGGTT--
T ss_pred             HHhcCCCCCCEEEEecCCC-CHHHHHHHHc-CC-EEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCc---hhhhccc--
Confidence            4556788999999999986 8888999988 76 99999999998887754    4554 22111111   1111111  


Q ss_pred             CCCccEEEEcccC-hHhHHHHHHHhhCCCceEEEEcC
Q 018529          237 NGGVDRSVECTGN-IDNMISAFECVHDGWGVAVLVGV  272 (354)
Q Consensus       237 ~~~~dvv~d~~g~-~~~~~~~~~~l~~~~g~~v~~g~  272 (354)
                      .+.+|+|+...+. ...++.+.+.|+++ |++++...
T Consensus       120 ~~~~D~v~~~~~~~~~~l~~~~~~Lkpg-G~lv~~~~  155 (204)
T 3njr_A          120 LPLPEAVFIGGGGSQALYDRLWEWLAPG-TRIVANAV  155 (204)
T ss_dssp             SCCCSEEEECSCCCHHHHHHHHHHSCTT-CEEEEEEC
T ss_pred             CCCCCEEEECCcccHHHHHHHHHhcCCC-cEEEEEec
Confidence            1369999976543 23788999999997 99887654

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=97.63  E-value=0.00075  Score=57.08  Aligned_cols=77  Identities=17%  Similarity=0.147  Sum_probs=53.2

Q ss_pred             CeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceE-E--cCCCCChhHHHHHHHHcC--CCccEEE
Q 018529          171 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-V--NTSEHDRPIQEVIAEMTN--GGVDRSV  244 (354)
Q Consensus       171 ~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v-~--~~~~~~~~~~~~i~~~~~--~~~dvv~  244 (354)
                      ++|||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+.+.+.... +  |..+. .++.+.+.+...  |+.|+++
T Consensus         3 K~vlVTGas~GIG~aia~~la~~Ga-~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~v~~~v~~~~~~~g~iDiLV   80 (247)
T 3ged_A            3 RGVIVTGGGHGIGKQICLDFLEAGD-KVCFIDIDEKRSADFAKERPNLFYFHGDVADP-LTLKKFVEYAMEKLQRIDVLV   80 (247)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHTTCTTEEEEECCTTSH-HHHHHHHHHHHHHHSCCCEEE
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcCCEEEEEecCCCH-HHHHHHHHHHHHHcCCCCEEE
Confidence            68999987 9999999999999999 99999999988877665544322 2  22222 122222222221  4799999


Q ss_pred             EcccC
Q 018529          245 ECTGN  249 (354)
Q Consensus       245 d~~g~  249 (354)
                      +++|.
T Consensus        81 NNAG~   85 (247)
T 3ged_A           81 NNACR   85 (247)
T ss_dssp             ECCCC
T ss_pred             ECCCC
Confidence            98874

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=97.58  E-value=0.0002  Score=54.94  Aligned_cols=77  Identities=14%  Similarity=0.274  Sum_probs=55.3

Q ss_pred             CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEccc
Q 018529          169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  248 (354)
Q Consensus       169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g  248 (354)
                      ++++|+|+|+|.+|...++.+...|. .|+++++++++.+.+++.+... +..+..+   .+.+.+..-+++|+|+.+++
T Consensus         5 ~~~~v~I~G~G~iG~~~a~~l~~~g~-~v~~~d~~~~~~~~~~~~~~~~-~~~d~~~---~~~l~~~~~~~~d~vi~~~~   79 (144)
T 2hmt_A            5 KNKQFAVIGLGRFGGSIVKELHRMGH-EVLAVDINEEKVNAYASYATHA-VIANATE---ENELLSLGIRNFEYVIVAIG   79 (144)
T ss_dssp             -CCSEEEECCSHHHHHHHHHHHHTTC-CCEEEESCHHHHHTTTTTCSEE-EECCTTC---HHHHHTTTGGGCSEEEECCC
T ss_pred             cCCcEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhCCEE-EEeCCCC---HHHHHhcCCCCCCEEEECCC
Confidence            35689999999999999999999998 7889999988887777666543 3222222   12343331236999999998


Q ss_pred             Ch
Q 018529          249 NI  250 (354)
Q Consensus       249 ~~  250 (354)
                      .+
T Consensus        80 ~~   81 (144)
T 2hmt_A           80 AN   81 (144)
T ss_dssp             SC
T ss_pred             Cc
Confidence            74

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=97.54  E-value=0.00038  Score=59.83  Aligned_cols=104  Identities=20%  Similarity=0.264  Sum_probs=70.0

Q ss_pred             CCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-HhcCCceE---EcCCCCC--hhHHHHHHHHcCCCc
Q 018529          168 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTDF---VNTSEHD--RPIQEVIAEMTNGGV  240 (354)
Q Consensus       168 ~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~~lg~~~v---~~~~~~~--~~~~~~i~~~~~~~~  240 (354)
                      -+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+ +++|....   .|..+.+  +.+.+.+.+.. |+.
T Consensus        27 L~gKvalVTGas~GIG~aiA~~la~~Ga-~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~-G~i  104 (273)
T 4fgs_A           27 LNAKIAVITGATSGIGLAAAKRFVAEGA-RVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEA-GRI  104 (273)
T ss_dssp             TTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHH-SCE
T ss_pred             hCCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHc-CCC
Confidence            36889999987 9999999999999999 999999999887754 55665432   2332221  11222222222 479


Q ss_pred             cEEEEcccCh-------------------------HhHHHHHHHhhCCCceEEEEcCCC
Q 018529          241 DRSVECTGNI-------------------------DNMISAFECVHDGWGVAVLVGVPS  274 (354)
Q Consensus       241 dvv~d~~g~~-------------------------~~~~~~~~~l~~~~g~~v~~g~~~  274 (354)
                      |++++++|..                         ...+.++..|+.+ |+++.++...
T Consensus       105 DiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~-G~IInisS~~  162 (273)
T 4fgs_A          105 DVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARG-SSVVLTGSTA  162 (273)
T ss_dssp             EEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEE-EEEEEECCGG
T ss_pred             CEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhC-CeEEEEeehh
Confidence            9999998852                         1233344556775 8999887643

>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0

Probab=97.53  E-value=0.00024  Score=58.25  Aligned_cols=102  Identities=16%  Similarity=0.170  Sum_probs=72.3

Q ss_pred             hhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCceE--EcCCCCChhHHHHHHHH
Q 018529          162 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDF--VNTSEHDRPIQEVIAEM  235 (354)
Q Consensus       162 ~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~~v--~~~~~~~~~~~~~i~~~  235 (354)
                      .....++++++||-+|+|. |..++.+++.....+|++++.+++..+.+++    .|.+.+  +..+-.+     .+.. 
T Consensus        33 l~~l~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~-----~~~~-  105 (204)
T 3e05_A           33 LSKLRLQDDLVMWDIGAGS-ASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPE-----GLDD-  105 (204)
T ss_dssp             HHHTTCCTTCEEEEETCTT-CHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTT-----TCTT-
T ss_pred             HHHcCCCCCCEEEEECCCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhh-----hhhc-
Confidence            4566789999999999985 8889999998644499999999998888765    344322  2211111     1111 


Q ss_pred             cCCCccEEEEccc---ChHhHHHHHHHhhCCCceEEEEcC
Q 018529          236 TNGGVDRSVECTG---NIDNMISAFECVHDGWGVAVLVGV  272 (354)
Q Consensus       236 ~~~~~dvv~d~~g---~~~~~~~~~~~l~~~~g~~v~~g~  272 (354)
                       .+.+|+|+....   ....++.+.+.|+++ |++++...
T Consensus       106 -~~~~D~i~~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~  143 (204)
T 3e05_A          106 -LPDPDRVFIGGSGGMLEEIIDAVDRRLKSE-GVIVLNAV  143 (204)
T ss_dssp             -SCCCSEEEESCCTTCHHHHHHHHHHHCCTT-CEEEEEEC
T ss_pred             -CCCCCEEEECCCCcCHHHHHHHHHHhcCCC-eEEEEEec
Confidence             136999998754   235788899999997 99988654

>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}

Probab=97.52  E-value=0.00032  Score=55.95  Aligned_cols=104  Identities=18%  Similarity=0.182  Sum_probs=72.8

Q ss_pred             hhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCc-eEEcCCCCChhHHHHHHHHc
Q 018529          162 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT-DFVNTSEHDRPIQEVIAEMT  236 (354)
Q Consensus       162 ~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~-~v~~~~~~~~~~~~~i~~~~  236 (354)
                      .....++++++||-+|+|. |..+..+++..+..+|++++.+++..+.+++    .|.. .++...+..    +.+... 
T Consensus        18 ~~~~~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~----~~~~~~-   91 (178)
T 3hm2_A           18 ISALAPKPHETLWDIGGGS-GSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRIAVQQGAP----RAFDDV-   91 (178)
T ss_dssp             HHHHCCCTTEEEEEESTTT-THHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSEEEECCTT----GGGGGC-
T ss_pred             HHHhcccCCCeEEEeCCCC-CHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCEEEecchH----hhhhcc-
Confidence            4455788999999999986 8999999998754499999999988888764    4554 332222211    111111 


Q ss_pred             CCCccEEEEcccC--hHhHHHHHHHhhCCCceEEEEcC
Q 018529          237 NGGVDRSVECTGN--IDNMISAFECVHDGWGVAVLVGV  272 (354)
Q Consensus       237 ~~~~dvv~d~~g~--~~~~~~~~~~l~~~~g~~v~~g~  272 (354)
                      .+.+|+|+.....  ...++.+.+.|+++ |++++...
T Consensus        92 ~~~~D~i~~~~~~~~~~~l~~~~~~L~~g-G~l~~~~~  128 (178)
T 3hm2_A           92 PDNPDVIFIGGGLTAPGVFAAAWKRLPVG-GRLVANAV  128 (178)
T ss_dssp             CSCCSEEEECC-TTCTTHHHHHHHTCCTT-CEEEEEEC
T ss_pred             CCCCCEEEECCcccHHHHHHHHHHhcCCC-CEEEEEee
Confidence            1479999976543  34789999999997 99887654

>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}

Probab=97.51  E-value=0.00056  Score=55.52  Aligned_cols=101  Identities=18%  Similarity=0.138  Sum_probs=66.5

Q ss_pred             cCCCCCCeEEEEcCChhHHHHHHHHHHcCC---------cEEEEEcCChhhHHHHHhcCCceEE-cCCCCChhHHHHHHH
Q 018529          165 AKPERGSSVAVFGLGAVGLAAAEGARIAGA---------SRIIGVDRSSKRFEEAKKFGVTDFV-NTSEHDRPIQEVIAE  234 (354)
Q Consensus       165 ~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~---------~~vi~v~~~~~~~~~~~~lg~~~v~-~~~~~~~~~~~~i~~  234 (354)
                      ..++++++||.+|+|+ |..+..+++..|.         .+|++++.++.+.     +.....+ ..+-.+....+.+.+
T Consensus        18 ~~~~~~~~vLDlGcG~-G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~~-----~~~~~~~~~~d~~~~~~~~~~~~   91 (196)
T 2nyu_A           18 QILRPGLRVLDCGAAP-GAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFP-----LEGATFLCPADVTDPRTSQRILE   91 (196)
T ss_dssp             CCCCTTCEEEEETCCS-CHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCCC-----CTTCEEECSCCTTSHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCC-CHHHHHHHHHhccccccccCCCceEEEEechhccc-----CCCCeEEEeccCCCHHHHHHHHH
Confidence            3468899999999988 9999999999873         4899999987431     1111223 221112223344444


Q ss_pred             HcCC-CccEEEE-----cccCh------------HhHHHHHHHhhCCCceEEEEcC
Q 018529          235 MTNG-GVDRSVE-----CTGNI------------DNMISAFECVHDGWGVAVLVGV  272 (354)
Q Consensus       235 ~~~~-~~dvv~d-----~~g~~------------~~~~~~~~~l~~~~g~~v~~g~  272 (354)
                      ..++ .||+|+.     +++..            ..+..+.+.|+++ |++++...
T Consensus        92 ~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lv~~~~  146 (196)
T 2nyu_A           92 VLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPG-GTFLCKTW  146 (196)
T ss_dssp             HSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEEEC
T ss_pred             hcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCC-CEEEEEec
Confidence            4444 8999995     33321            4577788999997 99887643

>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}

Probab=97.44  E-value=0.00045  Score=58.78  Aligned_cols=105  Identities=14%  Similarity=0.068  Sum_probs=74.5

Q ss_pred             hhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcC-CcEEEEEcCChhhHHHHHhc-----CCceEEcCCCCChhHHHHHHH
Q 018529          161 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKKF-----GVTDFVNTSEHDRPIQEVIAE  234 (354)
Q Consensus       161 l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g-~~~vi~v~~~~~~~~~~~~l-----g~~~v~~~~~~~~~~~~~i~~  234 (354)
                      +.....++++++||-+|+|. |..+..+++..+ ..+|++++.+++..+.+++.     |.+.+-.. ..+  +.+.  .
T Consensus        88 ~~~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~-~~d--~~~~--~  161 (258)
T 2pwy_A           88 MVTLLDLAPGMRVLEAGTGS-GGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFH-LGK--LEEA--E  161 (258)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEE-ESC--GGGC--C
T ss_pred             HHHHcCCCCCCEEEEECCCc-CHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEE-ECc--hhhc--C
Confidence            34566789999999999985 889999999864 23999999999988887663     53332111 111  1110  0


Q ss_pred             HcCCCccEEEEcccCh-HhHHHHHHHhhCCCceEEEEcC
Q 018529          235 MTNGGVDRSVECTGNI-DNMISAFECVHDGWGVAVLVGV  272 (354)
Q Consensus       235 ~~~~~~dvv~d~~g~~-~~~~~~~~~l~~~~g~~v~~g~  272 (354)
                      +..+.+|+|+...+.+ ..+..+.+.|+++ |+++++..
T Consensus       162 ~~~~~~D~v~~~~~~~~~~l~~~~~~L~~g-G~l~~~~~  199 (258)
T 2pwy_A          162 LEEAAYDGVALDLMEPWKVLEKAALALKPD-RFLVAYLP  199 (258)
T ss_dssp             CCTTCEEEEEEESSCGGGGHHHHHHHEEEE-EEEEEEES
T ss_pred             CCCCCcCEEEECCcCHHHHHHHHHHhCCCC-CEEEEEeC
Confidence            1224799999876655 6789999999997 99887753

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=97.43  E-value=0.00097  Score=55.93  Aligned_cols=97  Identities=20%  Similarity=0.214  Sum_probs=66.0

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCC-ceEE-cCCCCChhHHHHHHHHcCCCccEEEE
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV-TDFV-NTSEHDRPIQEVIAEMTNGGVDRSVE  245 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~-~~v~-~~~~~~~~~~~~i~~~~~~~~dvv~d  245 (354)
                      .+.+|||+|+ |.+|...+..+...|. +|+++++++++.+.+.+.++ ..+. |..       +.+.+.. +++|+||+
T Consensus        20 ~~~~ilVtGatG~iG~~l~~~L~~~G~-~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~-------~~~~~~~-~~~D~vi~   90 (236)
T 3e8x_A           20 QGMRVLVVGANGKVARYLLSELKNKGH-EPVAMVRNEEQGPELRERGASDIVVANLE-------EDFSHAF-ASIDAVVF   90 (236)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHTTCSEEEECCTT-------SCCGGGG-TTCSEEEE
T ss_pred             CCCeEEEECCCChHHHHHHHHHHhCCC-eEEEEECChHHHHHHHhCCCceEEEcccH-------HHHHHHH-cCCCEEEE
Confidence            4679999998 9999999999999998 99999999999888777676 4332 222       1222222 36999999


Q ss_pred             cccChH-------------hHHHHHHHhhC-CCceEEEEcCCC
Q 018529          246 CTGNID-------------NMISAFECVHD-GWGVAVLVGVPS  274 (354)
Q Consensus       246 ~~g~~~-------------~~~~~~~~l~~-~~g~~v~~g~~~  274 (354)
                      ++|...             ....+++.+.. +.+++++++...
T Consensus        91 ~ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~  133 (236)
T 3e8x_A           91 AAGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVG  133 (236)
T ss_dssp             CCCCCTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTT
T ss_pred             CCCCCCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCC
Confidence            988521             11223333322 227899988754

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=97.42  E-value=0.0013  Score=55.34  Aligned_cols=78  Identities=18%  Similarity=0.278  Sum_probs=51.5

Q ss_pred             CCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh-cCCce-E--EcCCCCChhHHHHHHHHc--CCCccE
Q 018529          170 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTD-F--VNTSEHDRPIQEVIAEMT--NGGVDR  242 (354)
Q Consensus       170 ~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~-lg~~~-v--~~~~~~~~~~~~~i~~~~--~~~~dv  242 (354)
                      ++++||+|+ |++|.+.+..+...|+ +|+.+++++++.+.+.+ ++... .  .|..+. .++.+.+++..  .+++|+
T Consensus         3 ~k~vlVTGas~GIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~-~~v~~~~~~~~~~~g~id~   80 (235)
T 3l6e_A            3 LGHIIVTGAGSGLGRALTIGLVERGH-QVSMMGRRYQRLQQQELLLGNAVIGIVADLAHH-EDVDVAFAAAVEWGGLPEL   80 (235)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGEEEEECCTTSH-HHHHHHHHHHHHHHCSCSE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhcCCceEEECCCCCH-HHHHHHHHHHHHhcCCCcE
Confidence            578999987 9999999888888999 89999999887765533 33221 1  222222 12222222221  137999


Q ss_pred             EEEcccC
Q 018529          243 SVECTGN  249 (354)
Q Consensus       243 v~d~~g~  249 (354)
                      +++++|.
T Consensus        81 lvnnAg~   87 (235)
T 3l6e_A           81 VLHCAGT   87 (235)
T ss_dssp             EEEECCC
T ss_pred             EEECCCC
Confidence            9999874

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=97.41  E-value=0.001  Score=56.67  Aligned_cols=103  Identities=15%  Similarity=0.086  Sum_probs=65.1

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH---HhcCCce-E--EcCCCCChhHHHHHHHHcC--CC
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA---KKFGVTD-F--VNTSEHDRPIQEVIAEMTN--GG  239 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~---~~lg~~~-v--~~~~~~~~~~~~~i~~~~~--~~  239 (354)
                      +|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+   .+.+... .  .|..+.+ ++.+.+.+...  |+
T Consensus         6 ~gKvalVTGas~GIG~aia~~la~~Ga-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~-~v~~~v~~~~~~~G~   83 (258)
T 4gkb_A            6 QDKVVIVTGGASGIGGAISMRLAEERA-IPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDA-QCRDAVAQTIATFGR   83 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHH-HHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHH-HHHHHHHHHHHHhCC
Confidence            5789999987 9999998888888999 888888887665544   3334322 2  2333321 22222222211  47


Q ss_pred             ccEEEEcccCh------------------------HhHHHHHHHhhCCCceEEEEcCC
Q 018529          240 VDRSVECTGNI------------------------DNMISAFECVHDGWGVAVLVGVP  273 (354)
Q Consensus       240 ~dvv~d~~g~~------------------------~~~~~~~~~l~~~~g~~v~~g~~  273 (354)
                      .|++++++|..                        ...+.++..|+..+|++|.++..
T Consensus        84 iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~  141 (258)
T 4gkb_A           84 LDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISSK  141 (258)
T ss_dssp             CCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCT
T ss_pred             CCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeeh
Confidence            99999998852                        12333445554434999999864

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=97.41  E-value=0.0012  Score=56.43  Aligned_cols=79  Identities=16%  Similarity=0.296  Sum_probs=50.3

Q ss_pred             CCCeEEEEcC-Ch--hHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCC--ceE--EcCCCCChhHHHHHHHHcC
Q 018529          169 RGSSVAVFGL-GA--VGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGV--TDF--VNTSEHDRPIQEVIAEMTN  237 (354)
Q Consensus       169 ~~~~vlI~G~-g~--~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~--~~v--~~~~~~~~~~~~~i~~~~~  237 (354)
                      .++++||+|+ |.  +|...++.+...|+ +|+.++++++..+.+++    ++.  ..+  .|..+. .++.+.+++...
T Consensus         6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~v~~~~~~~~~   83 (266)
T 3oig_A            6 EGRNIVVMGVANKRSIAWGIARSLHEAGA-RLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTND-AEIETCFASIKE   83 (266)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSS-HHHHHHHHHHHH
T ss_pred             CCCEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCH-HHHHHHHHHHHH
Confidence            4789999986 65  99998888888899 88888888765554433    332  122  233332 223333333221


Q ss_pred             --CCccEEEEcccC
Q 018529          238 --GGVDRSVECTGN  249 (354)
Q Consensus       238 --~~~dvv~d~~g~  249 (354)
                        +++|++++++|.
T Consensus        84 ~~g~id~li~~Ag~   97 (266)
T 3oig_A           84 QVGVIHGIAHCIAF   97 (266)
T ss_dssp             HHSCCCEEEECCCC
T ss_pred             HhCCeeEEEEcccc
Confidence              368999998874

>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*

Probab=97.40  E-value=0.00051  Score=60.57  Aligned_cols=103  Identities=16%  Similarity=0.187  Sum_probs=72.4

Q ss_pred             hhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhc----CCceEEcCCCCChhHHHHHHHHc
Q 018529          161 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF----GVTDFVNTSEHDRPIQEVIAEMT  236 (354)
Q Consensus       161 l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~l----g~~~v~~~~~~~~~~~~~i~~~~  236 (354)
                      +.+...++++++||-+|+|. |..+..+++..|. +|++++.+++..+.+++.    |...-+.....+  +    .++ 
T Consensus        82 ~~~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d--~----~~~-  152 (318)
T 2fk8_A           82 NLDKLDLKPGMTLLDIGCGW-GTTMRRAVERFDV-NVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQG--W----EDF-  152 (318)
T ss_dssp             HHTTSCCCTTCEEEEESCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESC--G----GGC-
T ss_pred             HHHhcCCCCcCEEEEEcccc-hHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEECC--h----HHC-
Confidence            45566788999999999986 8888899988888 999999999988887653    432111111111  1    112 


Q ss_pred             CCCccEEEEc-----ccC---hHhHHHHHHHhhCCCceEEEEcCC
Q 018529          237 NGGVDRSVEC-----TGN---IDNMISAFECVHDGWGVAVLVGVP  273 (354)
Q Consensus       237 ~~~~dvv~d~-----~g~---~~~~~~~~~~l~~~~g~~v~~g~~  273 (354)
                      .+.+|+|+..     .+.   ...+..+.+.|+++ |++++....
T Consensus       153 ~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~~  196 (318)
T 2fk8_A          153 AEPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPAD-GRMTVQSSV  196 (318)
T ss_dssp             CCCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTT-CEEEEEEEE
T ss_pred             CCCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCC-cEEEEEEec
Confidence            2579999976     321   35678888999997 998876543

>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*

Probab=97.38  E-value=0.00015  Score=61.02  Aligned_cols=101  Identities=21%  Similarity=0.199  Sum_probs=71.6

Q ss_pred             hhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCceEEcCCCCChhHHHHHHHHcC
Q 018529          162 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTN  237 (354)
Q Consensus       162 ~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~~~~  237 (354)
                      .+...++++++||.+|+| .|..+..+++..+. +|++++.+++..+.+++    .|...+. ....+  +.   ..+..
T Consensus        84 ~~~l~~~~~~~vLdiG~G-~G~~~~~la~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~v~-~~~~d--~~---~~~~~  155 (235)
T 1jg1_A           84 LEIANLKPGMNILEVGTG-SGWNAALISEIVKT-DVYTIERIPELVEFAKRNLERAGVKNVH-VILGD--GS---KGFPP  155 (235)
T ss_dssp             HHHHTCCTTCCEEEECCT-TSHHHHHHHHHHCS-CEEEEESCHHHHHHHHHHHHHTTCCSEE-EEESC--GG---GCCGG
T ss_pred             HHhcCCCCCCEEEEEeCC-cCHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHHHHHcCCCCcE-EEECC--cc---cCCCC
Confidence            455578899999999998 69999999998874 99999999988877765    4543321 11111  10   11112


Q ss_pred             C-CccEEEEcccChHhHHHHHHHhhCCCceEEEEc
Q 018529          238 G-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVG  271 (354)
Q Consensus       238 ~-~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g  271 (354)
                      + ++|+|+....-......+.+.|+++ |++++.-
T Consensus       156 ~~~fD~Ii~~~~~~~~~~~~~~~L~pg-G~lvi~~  189 (235)
T 1jg1_A          156 KAPYDVIIVTAGAPKIPEPLIEQLKIG-GKLIIPV  189 (235)
T ss_dssp             GCCEEEEEECSBBSSCCHHHHHTEEEE-EEEEEEE
T ss_pred             CCCccEEEECCcHHHHHHHHHHhcCCC-cEEEEEE
Confidence            3 5999998776555667889999997 8877653

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=97.37  E-value=0.003  Score=53.59  Aligned_cols=105  Identities=24%  Similarity=0.247  Sum_probs=67.6

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH----HhcCCceEEcCCC-CC-hhHHHHHHHHcC--CC
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTDFVNTSE-HD-RPIQEVIAEMTN--GG  239 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~----~~lg~~~v~~~~~-~~-~~~~~~i~~~~~--~~  239 (354)
                      +|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+    ++.|.......-+ .+ .++.+.+++...  |+
T Consensus         8 ~gKvalVTGas~GIG~aia~~la~~Ga-~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~   86 (255)
T 4g81_D            8 TGKTALVTGSARGLGFAYAEGLAAAGA-RVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGIH   86 (255)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCCC
Confidence            5789999987 9999999999999999 999999998776543    3445543322111 11 223333333322  37


Q ss_pred             ccEEEEcccCh-------------------------HhHHHHHHHh--hCCCceEEEEcCCC
Q 018529          240 VDRSVECTGNI-------------------------DNMISAFECV--HDGWGVAVLVGVPS  274 (354)
Q Consensus       240 ~dvv~d~~g~~-------------------------~~~~~~~~~l--~~~~g~~v~~g~~~  274 (354)
                      .|++++++|..                         ...+.++..|  +..+|+++.++...
T Consensus        87 iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~  148 (255)
T 4g81_D           87 VDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLT  148 (255)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGG
T ss_pred             CcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehh
Confidence            99999998852                         1233445545  22348999998654

>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*

Probab=97.35  E-value=0.00058  Score=58.05  Aligned_cols=103  Identities=20%  Similarity=0.194  Sum_probs=74.0

Q ss_pred             hhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcC-CcEEEEEcCChhhHHHHHhc----CCce-EEcCCCCChhHHHHHHH
Q 018529          161 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKKF----GVTD-FVNTSEHDRPIQEVIAE  234 (354)
Q Consensus       161 l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g-~~~vi~v~~~~~~~~~~~~l----g~~~-v~~~~~~~~~~~~~i~~  234 (354)
                      +.....++++++||-+|+|. |..+..+++..+ ..+|++++.+++..+.+++.    |... +- ....+  +.+   .
T Consensus        85 i~~~~~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~-~~~~d--~~~---~  157 (255)
T 3mb5_A           85 IVAYAGISPGDFIVEAGVGS-GALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVT-IKLKD--IYE---G  157 (255)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEE-EECSC--GGG---C
T ss_pred             HHHhhCCCCCCEEEEecCCc-hHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceE-EEECc--hhh---c
Confidence            34567889999999999986 888999999853 33999999999988887653    5432 21 11111  211   1


Q ss_pred             HcCCCccEEEEcccCh-HhHHHHHHHhhCCCceEEEEc
Q 018529          235 MTNGGVDRSVECTGNI-DNMISAFECVHDGWGVAVLVG  271 (354)
Q Consensus       235 ~~~~~~dvv~d~~g~~-~~~~~~~~~l~~~~g~~v~~g  271 (354)
                      +..+.+|+|+...+.+ ..++.+.+.|+++ |+++++.
T Consensus       158 ~~~~~~D~v~~~~~~~~~~l~~~~~~L~~g-G~l~~~~  194 (255)
T 3mb5_A          158 IEEENVDHVILDLPQPERVVEHAAKALKPG-GFFVAYT  194 (255)
T ss_dssp             CCCCSEEEEEECSSCGGGGHHHHHHHEEEE-EEEEEEE
T ss_pred             cCCCCcCEEEECCCCHHHHHHHHHHHcCCC-CEEEEEE
Confidence            2223799999877664 4789999999997 9998774

>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*

Probab=97.35  E-value=0.00031  Score=63.82  Aligned_cols=92  Identities=24%  Similarity=0.280  Sum_probs=71.7

Q ss_pred             CCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEc
Q 018529          167 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  246 (354)
Q Consensus       167 ~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~  246 (354)
                      .-.|.+|+|+|.|.+|...++.++.+|+ +|+++++++.+...+...|...+      +  +.+.++     ..|+|+.+
T Consensus       208 ~L~GktVgIiG~G~IG~~vA~~Lka~Ga-~Viv~D~~p~~a~~A~~~G~~~~------s--L~eal~-----~ADVVilt  273 (436)
T 3h9u_A          208 MIAGKTACVCGYGDVGKGCAAALRGFGA-RVVVTEVDPINALQAAMEGYQVL------L--VEDVVE-----EAHIFVTT  273 (436)
T ss_dssp             CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEEC------C--HHHHTT-----TCSEEEEC
T ss_pred             cccCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEECCChhhhHHHHHhCCeec------C--HHHHHh-----hCCEEEEC
Confidence            3478999999999999999999999999 89999999888777777776421      1  333332     48999998


Q ss_pred             ccChHhHH-HHHHHhhCCCceEEEEcCC
Q 018529          247 TGNIDNMI-SAFECVHDGWGVAVLVGVP  273 (354)
Q Consensus       247 ~g~~~~~~-~~~~~l~~~~g~~v~~g~~  273 (354)
                      .+....+. ..++.|+++ ..++.++..
T Consensus       274 ~gt~~iI~~e~l~~MK~g-AIVINvgRg  300 (436)
T 3h9u_A          274 TGNDDIITSEHFPRMRDD-AIVCNIGHF  300 (436)
T ss_dssp             SSCSCSBCTTTGGGCCTT-EEEEECSSS
T ss_pred             CCCcCccCHHHHhhcCCC-cEEEEeCCC
Confidence            87655544 677888997 888888754

>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}

Probab=97.34  E-value=0.00027  Score=59.61  Aligned_cols=103  Identities=14%  Similarity=0.098  Sum_probs=70.6

Q ss_pred             cCCCCCCeEEEEcCChhHHHHHHHHHHcC-CcEEEEEcCChhhHHHHHh----cCCceEEcCCCCChhHHHHHHHHc---
Q 018529          165 AKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMT---  236 (354)
Q Consensus       165 ~~~~~~~~vlI~G~g~~G~~a~~~a~~~g-~~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~~~---  236 (354)
                      ....++++||-+|+| .|..+..+++..+ ..+|++++.+++..+.+++    .|...-+.....+  ..+.+..+.   
T Consensus        56 ~~~~~~~~VLdiG~G-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d--~~~~~~~~~~~~  132 (239)
T 2hnk_A           56 TKISGAKRIIEIGTF-TGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGS--ALETLQVLIDSK  132 (239)
T ss_dssp             HHHHTCSEEEEECCT-TCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESC--HHHHHHHHHHCS
T ss_pred             HHhhCcCEEEEEeCC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECC--HHHHHHHHHhhc
Confidence            345678899999998 5899999999874 2399999999998887765    3543211111222  333333331   


Q ss_pred             -----------C-CCccEEEEcccCh---HhHHHHHHHhhCCCceEEEEc
Q 018529          237 -----------N-GGVDRSVECTGNI---DNMISAFECVHDGWGVAVLVG  271 (354)
Q Consensus       237 -----------~-~~~dvv~d~~g~~---~~~~~~~~~l~~~~g~~v~~g  271 (354)
                                 . +.||+|+......   ..++.+.+.|+++ |++++..
T Consensus       133 ~~~~~~~~f~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pg-G~lv~~~  181 (239)
T 2hnk_A          133 SAPSWASDFAFGPSSIDLFFLDADKENYPNYYPLILKLLKPG-GLLIADN  181 (239)
T ss_dssp             SCCGGGTTTCCSTTCEEEEEECSCGGGHHHHHHHHHHHEEEE-EEEEEEC
T ss_pred             ccccccccccCCCCCcCEEEEeCCHHHHHHHHHHHHHHcCCC-eEEEEEc
Confidence                       1 5799999876543   4668888999997 9988653

>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}

Probab=97.33  E-value=0.00016  Score=60.70  Aligned_cols=103  Identities=18%  Similarity=0.185  Sum_probs=69.9

Q ss_pred             cCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCc-eEEcCCCCChhHHHHHHHHc-CC
Q 018529          165 AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT-DFVNTSEHDRPIQEVIAEMT-NG  238 (354)
Q Consensus       165 ~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~-~v~~~~~~~~~~~~~i~~~~-~~  238 (354)
                      ....++++||-+|+| .|..+..+++..+..+|++++.+++..+.+++    .|.. .+-.. ..+  +.+.+.... .+
T Consensus        50 ~~~~~~~~vLdiG~G-~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~-~~d--~~~~~~~~~~~~  125 (233)
T 2gpy_A           50 LKMAAPARILEIGTA-IGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELL-FGD--ALQLGEKLELYP  125 (233)
T ss_dssp             HHHHCCSEEEEECCT-TSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEE-CSC--GGGSHHHHTTSC
T ss_pred             HhccCCCEEEEecCC-CcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEE-ECC--HHHHHHhcccCC
Confidence            345678899999998 68889999998743399999999998887765    3542 12111 111  222222222 34


Q ss_pred             CccEEEEcccC---hHhHHHHHHHhhCCCceEEEEcC
Q 018529          239 GVDRSVECTGN---IDNMISAFECVHDGWGVAVLVGV  272 (354)
Q Consensus       239 ~~dvv~d~~g~---~~~~~~~~~~l~~~~g~~v~~g~  272 (354)
                      .||+|+.....   ...++.+.+.|+++ |++++...
T Consensus       126 ~fD~I~~~~~~~~~~~~l~~~~~~L~pg-G~lv~~~~  161 (233)
T 2gpy_A          126 LFDVLFIDAAKGQYRRFFDMYSPMVRPG-GLILSDNV  161 (233)
T ss_dssp             CEEEEEEEGGGSCHHHHHHHHGGGEEEE-EEEEEETT
T ss_pred             CccEEEECCCHHHHHHHHHHHHHHcCCC-eEEEEEcC
Confidence            79999876553   35678888899997 99887643

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=97.32  E-value=0.0025  Score=52.76  Aligned_cols=92  Identities=21%  Similarity=0.226  Sum_probs=63.7

Q ss_pred             eEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceE-EcCCCCChhHHHHHHHHcCCCccEEEEcccC
Q 018529          172 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHDRPIQEVIAEMTNGGVDRSVECTGN  249 (354)
Q Consensus       172 ~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v-~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~  249 (354)
                      +|||+|+ |.+|...+..+...|. +|+++++++++.+.+...++..+ .|..+.+  .    ..+  +++|+||+++|.
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~D~~d~~--~----~~~--~~~d~vi~~ag~   72 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGH-EVLAVVRDPQKAADRLGATVATLVKEPLVLT--E----ADL--DSVDAVVDALSV   72 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHTCTTSEEEECCGGGCC--H----HHH--TTCSEEEECCCC
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCC-EEEEEEecccccccccCCCceEEeccccccc--H----hhc--ccCCEEEECCcc
Confidence            5899998 9999999999998998 99999999988776655455433 2333332  2    222  368999999976


Q ss_pred             h----------HhHHHHHHHhhCCCceEEEEcC
Q 018529          250 I----------DNMISAFECVHDGWGVAVLVGV  272 (354)
Q Consensus       250 ~----------~~~~~~~~~l~~~~g~~v~~g~  272 (354)
                      .          .....+++.+...++++++++.
T Consensus        73 ~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS  105 (224)
T 3h2s_A           73 PWGSGRGYLHLDFATHLVSLLRNSDTLAVFILG  105 (224)
T ss_dssp             CTTSSCTHHHHHHHHHHHHTCTTCCCEEEEECC
T ss_pred             CCCcchhhHHHHHHHHHHHHHHHcCCcEEEEec
Confidence            2          2334455555543378888864

>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}

Probab=97.31  E-value=0.0015  Score=54.31  Aligned_cols=103  Identities=15%  Similarity=0.117  Sum_probs=70.4

Q ss_pred             hhcCCCCCCeEEEEcCChhHHHHHHHHHHc--CCcEEEEEcCChhhHHHHHh----cCCc--eEEcCCCCChhHHHHHHH
Q 018529          163 NVAKPERGSSVAVFGLGAVGLAAAEGARIA--GASRIIGVDRSSKRFEEAKK----FGVT--DFVNTSEHDRPIQEVIAE  234 (354)
Q Consensus       163 ~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~--g~~~vi~v~~~~~~~~~~~~----lg~~--~v~~~~~~~~~~~~~i~~  234 (354)
                      ...+.+++.+||=+|+|. |..++.+|+.+  +. +|++++.+++..+.+++    .|..  .+- ....+  ..+.+..
T Consensus        50 ~~~~~~~~~~vLdiG~G~-G~~~~~la~~~~~~~-~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~-~~~gd--a~~~l~~  124 (221)
T 3dr5_A           50 ATTNGNGSTGAIAITPAA-GLVGLYILNGLADNT-TLTCIDPESEHQRQAKALFREAGYSPSRVR-FLLSR--PLDVMSR  124 (221)
T ss_dssp             HHSCCTTCCEEEEESTTH-HHHHHHHHHHSCTTS-EEEEECSCHHHHHHHHHHHHHTTCCGGGEE-EECSC--HHHHGGG
T ss_pred             HhhCCCCCCCEEEEcCCc-hHHHHHHHHhCCCCC-EEEEEECCHHHHHHHHHHHHHcCCCcCcEE-EEEcC--HHHHHHH
Confidence            344555667999889874 88999999987  45 99999999998877754    4543  232 22222  4444444


Q ss_pred             HcCCCccEEEEcccC---hHhHHHHHHHhhCCCceEEEEc
Q 018529          235 MTNGGVDRSVECTGN---IDNMISAFECVHDGWGVAVLVG  271 (354)
Q Consensus       235 ~~~~~~dvv~d~~g~---~~~~~~~~~~l~~~~g~~v~~g  271 (354)
                      +..+.||+||.....   ...++.+.+.|+++ |.+++-.
T Consensus       125 ~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpG-G~lv~dn  163 (221)
T 3dr5_A          125 LANDSYQLVFGQVSPMDLKALVDAAWPLLRRG-GALVLAD  163 (221)
T ss_dssp             SCTTCEEEEEECCCTTTHHHHHHHHHHHEEEE-EEEEETT
T ss_pred             hcCCCcCeEEEcCcHHHHHHHHHHHHHHcCCC-cEEEEeC
Confidence            334589999865432   24678889999997 8887643

>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}

Probab=97.29  E-value=0.00024  Score=58.71  Aligned_cols=104  Identities=19%  Similarity=0.211  Sum_probs=71.9

Q ss_pred             hhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCC-cEEEEEcCChhhHHHHHh----cCCceEEcCCCCChhHHHHHHHHc
Q 018529          162 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMT  236 (354)
Q Consensus       162 ~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~-~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~~~  236 (354)
                      .+...++++++||.+|+| .|..+..+++..|. .+|++++.+++..+.+++    .|...+. ....+  ..+.+.  .
T Consensus        70 ~~~~~~~~~~~vLdiG~G-~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~-~~~~d--~~~~~~--~  143 (215)
T 2yxe_A           70 CELLDLKPGMKVLEIGTG-CGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVI-VIVGD--GTLGYE--P  143 (215)
T ss_dssp             HHHTTCCTTCEEEEECCT-TSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEE-EEESC--GGGCCG--G
T ss_pred             HHhhCCCCCCEEEEECCC-ccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeE-EEECC--cccCCC--C
Confidence            455678899999999998 49999999998862 299999999988887765    3433221 11111  111010  1


Q ss_pred             CCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcC
Q 018529          237 NGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGV  272 (354)
Q Consensus       237 ~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~  272 (354)
                      .+.+|+|+...+-....+.+.+.|+++ |++++.-.
T Consensus       144 ~~~fD~v~~~~~~~~~~~~~~~~L~pg-G~lv~~~~  178 (215)
T 2yxe_A          144 LAPYDRIYTTAAGPKIPEPLIRQLKDG-GKLLMPVG  178 (215)
T ss_dssp             GCCEEEEEESSBBSSCCHHHHHTEEEE-EEEEEEES
T ss_pred             CCCeeEEEECCchHHHHHHHHHHcCCC-cEEEEEEC
Confidence            247999998876555667889999997 98876643

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=97.28  E-value=0.0052  Score=51.88  Aligned_cols=81  Identities=14%  Similarity=0.136  Sum_probs=54.2

Q ss_pred             CCCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH-hcCCceE-EcCCCCCh-hHHHHHHHHcCCCcc
Q 018529          166 KPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTDF-VNTSEHDR-PIQEVIAEMTNGGVD  241 (354)
Q Consensus       166 ~~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~-~lg~~~v-~~~~~~~~-~~~~~i~~~~~~~~d  241 (354)
                      ...+++++||+|+ |++|...+..+...|+ +|+++++++++.+.+. ++..... +..+-.+. .+.+.+++.  +++|
T Consensus        10 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~--~~id   86 (249)
T 3f9i_A           10 IDLTGKTSLITGASSGIGSAIARLLHKLGS-KVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISKT--SNLD   86 (249)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHTC--SCCS
T ss_pred             ccCCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHhc--CCCC
Confidence            3467889999987 9999999888888999 8999999988877654 3433222 22222221 222223322  4799


Q ss_pred             EEEEcccC
Q 018529          242 RSVECTGN  249 (354)
Q Consensus       242 vv~d~~g~  249 (354)
                      ++++++|.
T Consensus        87 ~li~~Ag~   94 (249)
T 3f9i_A           87 ILVCNAGI   94 (249)
T ss_dssp             EEEECCC-
T ss_pred             EEEECCCC
Confidence            99999884

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=97.28  E-value=0.00099  Score=56.74  Aligned_cols=79  Identities=18%  Similarity=0.281  Sum_probs=53.1

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH-hcCCce-EE--cCCCCC--hhHHHHHHHHcCCCcc
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTD-FV--NTSEHD--RPIQEVIAEMTNGGVD  241 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~-~lg~~~-v~--~~~~~~--~~~~~~i~~~~~~~~d  241 (354)
                      .|+++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+. +++... .+  |..+.+  ..+.+.+.+.. +++|
T Consensus         7 ~gk~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~id   84 (255)
T 4eso_A            7 QGKKAIVIGGTHGMGLATVRRLVEGGA-EVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTL-GAID   84 (255)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHH-SSEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHh-CCCC
Confidence            5789999987 9999999998888999 8999999988876553 344332 22  222211  11222222222 4799


Q ss_pred             EEEEcccC
Q 018529          242 RSVECTGN  249 (354)
Q Consensus       242 vv~d~~g~  249 (354)
                      ++++++|.
T Consensus        85 ~lv~nAg~   92 (255)
T 4eso_A           85 LLHINAGV   92 (255)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999874

>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*

Probab=97.28  E-value=0.0011  Score=57.93  Aligned_cols=103  Identities=17%  Similarity=0.200  Sum_probs=73.6

Q ss_pred             hhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCc-eEEcCCCCChhHHHHHHHH
Q 018529          161 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT-DFVNTSEHDRPIQEVIAEM  235 (354)
Q Consensus       161 l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~-~v~~~~~~~~~~~~~i~~~  235 (354)
                      +.....++++++||-+|+|. |..+..+++..|. +|++++.+++..+.+++    .|.. .+- ....+  +    .++
T Consensus        64 ~~~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~-~~~~d--~----~~~  134 (302)
T 3hem_A           64 ALDKLNLEPGMTLLDIGCGW-GSTMRHAVAEYDV-NVIGLTLSENQYAHDKAMFDEVDSPRRKE-VRIQG--W----EEF  134 (302)
T ss_dssp             HHHTTCCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEECCHHHHHHHHHHHHHSCCSSCEE-EEECC--G----GGC
T ss_pred             HHHHcCCCCcCEEEEeeccC-cHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHhcCCCCceE-EEECC--H----HHc
Confidence            45667889999999999985 8889999999887 99999999998887765    3432 221 11111  1    112


Q ss_pred             cCCCccEEEEccc-----C----------hHhHHHHHHHhhCCCceEEEEcCCC
Q 018529          236 TNGGVDRSVECTG-----N----------IDNMISAFECVHDGWGVAVLVGVPS  274 (354)
Q Consensus       236 ~~~~~dvv~d~~g-----~----------~~~~~~~~~~l~~~~g~~v~~g~~~  274 (354)
                       .+.+|+|+....     .          ...+..+.+.|+++ |++++.....
T Consensus       135 -~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~i~~~~~  186 (302)
T 3hem_A          135 -DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDD-GRMLLHTITI  186 (302)
T ss_dssp             -CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTT-CEEEEEEEEC
T ss_pred             -CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCC-cEEEEEEEec
Confidence             458999987422     1          25678888999997 9998776543

>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}

Probab=97.27  E-value=0.00014  Score=59.64  Aligned_cols=133  Identities=17%  Similarity=0.222  Sum_probs=79.0

Q ss_pred             cceeeEE-eeccceEECCCCCCccchhhcccchhhhhhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEc
Q 018529          123 TFSEYTV-VHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVD  201 (354)
Q Consensus       123 ~~a~~~~-v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~  201 (354)
                      .|.+|.. .+....+.+++.+++.....-.   ........ ...++++++||-+|+|. |..+..+++. +..+|++++
T Consensus        17 ~w~~~~~~~~~~~~~~~~~~~~f~~~~~~~---~~~~~~~l-~~~~~~~~~vLDiG~G~-G~~~~~l~~~-~~~~v~~vD   90 (205)
T 3grz_A           17 EWEDYQPVFKDQEIIRLDPGLAFGTGNHQT---TQLAMLGI-ERAMVKPLTVADVGTGS-GILAIAAHKL-GAKSVLATD   90 (205)
T ss_dssp             TTCCCCCSSTTCEEEEESCC-----CCHHH---HHHHHHHH-HHHCSSCCEEEEETCTT-SHHHHHHHHT-TCSEEEEEE
T ss_pred             cccccccCCCCceeEEecCCcccCCCCCcc---HHHHHHHH-HHhccCCCEEEEECCCC-CHHHHHHHHC-CCCEEEEEE
Confidence            6777777 6777888888887665542211   11111111 11257889999999976 7777777764 555999999


Q ss_pred             CChhhHHHHHh----cCCce--EEcCCCCChhHHHHHHHHcCCCccEEEEcccCh---HhHHHHHHHhhCCCceEEEEc
Q 018529          202 RSSKRFEEAKK----FGVTD--FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI---DNMISAFECVHDGWGVAVLVG  271 (354)
Q Consensus       202 ~~~~~~~~~~~----lg~~~--v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~~---~~~~~~~~~l~~~~g~~v~~g  271 (354)
                      .+++..+.+++    .+...  ++..+-.         +...+.+|+|+......   ..++.+.+.|+++ |++++..
T Consensus        91 ~s~~~~~~a~~~~~~~~~~~v~~~~~d~~---------~~~~~~fD~i~~~~~~~~~~~~l~~~~~~L~~g-G~l~~~~  159 (205)
T 3grz_A           91 ISDESMTAAEENAALNGIYDIALQKTSLL---------ADVDGKFDLIVANILAEILLDLIPQLDSHLNED-GQVIFSG  159 (205)
T ss_dssp             SCHHHHHHHHHHHHHTTCCCCEEEESSTT---------TTCCSCEEEEEEESCHHHHHHHGGGSGGGEEEE-EEEEEEE
T ss_pred             CCHHHHHHHHHHHHHcCCCceEEEecccc---------ccCCCCceEEEECCcHHHHHHHHHHHHHhcCCC-CEEEEEe
Confidence            99988887765    34332  2221111         11234799998754332   2345556678887 9888754

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=97.25  E-value=0.0035  Score=51.67  Aligned_cols=92  Identities=12%  Similarity=0.227  Sum_probs=63.3

Q ss_pred             eEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceE-EcCCCCChhHHHHHHHHcCCCccEEEEcccC
Q 018529          172 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHDRPIQEVIAEMTNGGVDRSVECTGN  249 (354)
Q Consensus       172 ~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v-~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~  249 (354)
                      +|||+|+ |.+|...++.+...|. +|+++++++++.+.+. -++..+ .|..+.+  .    +.+  +++|+||+++|.
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~-~~~~~~~~D~~d~~--~----~~~--~~~d~vi~~ag~   71 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGH-EVTAIVRNAGKITQTH-KDINILQKDIFDLT--L----SDL--SDQNVVVDAYGI   71 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCSHHHHHHC-SSSEEEECCGGGCC--H----HHH--TTCSEEEECCCS
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCC-EEEEEEcCchhhhhcc-CCCeEEeccccChh--h----hhh--cCCCEEEECCcC
Confidence            5899997 9999999999999998 9999999988877654 344322 2333322  2    222  368999999986


Q ss_pred             h--------HhHHHHHHHhhCC-CceEEEEcCC
Q 018529          250 I--------DNMISAFECVHDG-WGVAVLVGVP  273 (354)
Q Consensus       250 ~--------~~~~~~~~~l~~~-~g~~v~~g~~  273 (354)
                      .        .....+++.+... .+++++++..
T Consensus        72 ~~~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~  104 (221)
T 3ew7_A           72 SPDEAEKHVTSLDHLISVLNGTVSPRLLVVGGA  104 (221)
T ss_dssp             STTTTTSHHHHHHHHHHHHCSCCSSEEEEECCC
T ss_pred             CccccchHHHHHHHHHHHHHhcCCceEEEEecc
Confidence            3        2334556665553 2688888754

>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}

Probab=97.25  E-value=0.00046  Score=56.77  Aligned_cols=101  Identities=16%  Similarity=0.146  Sum_probs=70.0

Q ss_pred             hhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCceEEcCCCCChhHHHHHHHHcC
Q 018529          162 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTN  237 (354)
Q Consensus       162 ~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~~~~  237 (354)
                      .+...++++++||-+|+| .|..+..+++. +. +|++++.+++..+.+++    .|...+-... .+  ..+...  ..
T Consensus        70 ~~~l~~~~~~~vLdiG~G-~G~~~~~la~~-~~-~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~-~d--~~~~~~--~~  141 (210)
T 3lbf_A           70 TELLELTPQSRVLEIGTG-SGYQTAILAHL-VQ-HVCSVERIKGLQWQARRRLKNLDLHNVSTRH-GD--GWQGWQ--AR  141 (210)
T ss_dssp             HHHTTCCTTCEEEEECCT-TSHHHHHHHHH-SS-EEEEEESCHHHHHHHHHHHHHTTCCSEEEEE-SC--GGGCCG--GG
T ss_pred             HHhcCCCCCCEEEEEcCC-CCHHHHHHHHh-CC-EEEEEecCHHHHHHHHHHHHHcCCCceEEEE-CC--cccCCc--cC
Confidence            456678999999999998 48888888888 65 99999999998887765    3543221111 11  111011  12


Q ss_pred             CCccEEEEcccChHhHHHHHHHhhCCCceEEEEc
Q 018529          238 GGVDRSVECTGNIDNMISAFECVHDGWGVAVLVG  271 (354)
Q Consensus       238 ~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g  271 (354)
                      +.||+|+....-......+.+.|+++ |++++.-
T Consensus       142 ~~~D~i~~~~~~~~~~~~~~~~L~pg-G~lv~~~  174 (210)
T 3lbf_A          142 APFDAIIVTAAPPEIPTALMTQLDEG-GILVLPV  174 (210)
T ss_dssp             CCEEEEEESSBCSSCCTHHHHTEEEE-EEEEEEE
T ss_pred             CCccEEEEccchhhhhHHHHHhcccC-cEEEEEE
Confidence            47999998766555566788999997 9877653

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=97.24  E-value=0.0045  Score=46.90  Aligned_cols=77  Identities=18%  Similarity=0.256  Sum_probs=53.7

Q ss_pred             CCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh-cCCceEEcCCCCChhHHHHHHHHcCCCccEEEEccc
Q 018529          170 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  248 (354)
Q Consensus       170 ~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~-lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g  248 (354)
                      +.+|+|+|+|.+|...++.+...|. .|+++++++++.+.+++ ++...+. .+..+  . +.+.+..-.++|+|+.+++
T Consensus         4 ~m~i~IiG~G~iG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~~~~~~~~~-~d~~~--~-~~l~~~~~~~~d~vi~~~~   78 (140)
T 1lss_A            4 GMYIIIAGIGRVGYTLAKSLSEKGH-DIVLIDIDKDICKKASAEIDALVIN-GDCTK--I-KTLEDAGIEDADMYIAVTG   78 (140)
T ss_dssp             -CEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCSSEEEE-SCTTS--H-HHHHHTTTTTCSEEEECCS
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHhcCcEEEE-cCCCC--H-HHHHHcCcccCCEEEEeeC
Confidence            3579999999999999998888898 89999999988877654 5654332 22222  1 2233322237999999998


Q ss_pred             ChH
Q 018529          249 NID  251 (354)
Q Consensus       249 ~~~  251 (354)
                      ...
T Consensus        79 ~~~   81 (140)
T 1lss_A           79 KEE   81 (140)
T ss_dssp             CHH
T ss_pred             Cch
Confidence            753

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=97.23  E-value=0.0028  Score=54.57  Aligned_cols=79  Identities=25%  Similarity=0.380  Sum_probs=51.3

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH----HhcCC-ce--EE--cCCCCChhHHHHHHHHc--
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGV-TD--FV--NTSEHDRPIQEVIAEMT--  236 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~----~~lg~-~~--v~--~~~~~~~~~~~~i~~~~--  236 (354)
                      .++++||+|+ |.+|...++.+...|+ +|++++++.++.+.+    ++.+. ..  ++  |..+. .++.+.++++.  
T Consensus        31 ~~k~vlVTGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~  108 (279)
T 1xg5_A           31 RDRLALVTGASGGIGAAVARALVQQGL-KVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNE-EDILSMFSAIRSQ  108 (279)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCH-HHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCH-HHHHHHHHHHHHh
Confidence            4678999987 9999999998888999 899999988766543    22332 11  22  22221 12322232221  


Q ss_pred             CCCccEEEEcccC
Q 018529          237 NGGVDRSVECTGN  249 (354)
Q Consensus       237 ~~~~dvv~d~~g~  249 (354)
                      .+++|++|+++|.
T Consensus       109 ~g~iD~vi~~Ag~  121 (279)
T 1xg5_A          109 HSGVDICINNAGL  121 (279)
T ss_dssp             HCCCSEEEECCCC
T ss_pred             CCCCCEEEECCCC
Confidence            1379999999873

>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}

Probab=97.23  E-value=0.0028  Score=52.92  Aligned_cols=101  Identities=18%  Similarity=0.226  Sum_probs=69.3

Q ss_pred             hhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCc-EEEEEcCChhhHHHHHhc----C-CceEEcCCCCChhHHHHHHHHc
Q 018529          163 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGAS-RIIGVDRSSKRFEEAKKF----G-VTDFVNTSEHDRPIQEVIAEMT  236 (354)
Q Consensus       163 ~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~-~vi~v~~~~~~~~~~~~l----g-~~~v~~~~~~~~~~~~~i~~~~  236 (354)
                      +...++||++||=+|+|+ |..+..+|+..|.+ +|++++.+++..+.+++.    + ...+.. +..+  . +... ..
T Consensus        71 ~~l~ikpG~~VldlG~G~-G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~-d~~~--p-~~~~-~~  144 (233)
T 4df3_A           71 IELPVKEGDRILYLGIAS-GTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILG-DARF--P-EKYR-HL  144 (233)
T ss_dssp             SCCCCCTTCEEEEETCTT-SHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEES-CTTC--G-GGGT-TT
T ss_pred             hhcCCCCCCEEEEecCcC-CHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEE-eccC--c-cccc-cc
Confidence            456799999999999975 88899999988753 999999999988877553    2 222222 1111  0 0010 11


Q ss_pred             CCCccEEEEcccChH----hHHHHHHHhhCCCceEEEE
Q 018529          237 NGGVDRSVECTGNID----NMISAFECVHDGWGVAVLV  270 (354)
Q Consensus       237 ~~~~dvv~d~~g~~~----~~~~~~~~l~~~~g~~v~~  270 (354)
                      .+.+|+||.....++    .+..+.+.|+++ |++++.
T Consensus       145 ~~~vDvVf~d~~~~~~~~~~l~~~~r~LKpG-G~lvI~  181 (233)
T 4df3_A          145 VEGVDGLYADVAQPEQAAIVVRNARFFLRDG-GYMLMA  181 (233)
T ss_dssp             CCCEEEEEECCCCTTHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             cceEEEEEEeccCChhHHHHHHHHHHhccCC-CEEEEE
Confidence            236899987665543    566778899997 998765

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=97.23  E-value=0.0019  Score=54.91  Aligned_cols=80  Identities=21%  Similarity=0.215  Sum_probs=52.0

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-HhcCCce-EEcCCCCC-hhHHHHHHHHc--CCCccE
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTD-FVNTSEHD-RPIQEVIAEMT--NGGVDR  242 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~~lg~~~-v~~~~~~~-~~~~~~i~~~~--~~~~dv  242 (354)
                      .++++||+|+ |.+|...+..+...|+ +|+++++++++.+.+ ++++... .+..+-.+ .++.+.+++..  .+++|+
T Consensus         5 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   83 (253)
T 1hxh_A            5 QGKVALVTGGASGVGLEVVKLLLGEGA-KVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNV   83 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4678999987 9999999988888899 899999998776654 3444332 22111122 12222222221  136899


Q ss_pred             EEEcccC
Q 018529          243 SVECTGN  249 (354)
Q Consensus       243 v~d~~g~  249 (354)
                      +++++|.
T Consensus        84 lv~~Ag~   90 (253)
T 1hxh_A           84 LVNNAGI   90 (253)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999874

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=97.21  E-value=0.0028  Score=55.40  Aligned_cols=80  Identities=25%  Similarity=0.277  Sum_probs=53.2

Q ss_pred             CCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH----hcCCce-E--EcCCCCChhHHHHHHHHcC--
Q 018529          168 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD-F--VNTSEHDRPIQEVIAEMTN--  237 (354)
Q Consensus       168 ~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~----~lg~~~-v--~~~~~~~~~~~~~i~~~~~--  237 (354)
                      -.++++||+|+ |++|...+..+...|+ +|+++++++++.+.+.    +.+... .  .|..+. ..+.+.+++...  
T Consensus        29 l~gk~vlVTGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~-~~v~~~~~~~~~~~  106 (301)
T 3tjr_A           29 FDGRAAVVTGGASGIGLATATEFARRGA-RLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHL-DEMVRLADEAFRLL  106 (301)
T ss_dssp             STTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCH-HHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCH-HHHHHHHHHHHHhC
Confidence            36789999987 9999999998889999 8999999988766542    234332 2  233222 122222322211  


Q ss_pred             CCccEEEEcccC
Q 018529          238 GGVDRSVECTGN  249 (354)
Q Consensus       238 ~~~dvv~d~~g~  249 (354)
                      +++|++++++|.
T Consensus       107 g~id~lvnnAg~  118 (301)
T 3tjr_A          107 GGVDVVFSNAGI  118 (301)
T ss_dssp             SSCSEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence            379999999884

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=97.20  E-value=0.0026  Score=54.94  Aligned_cols=102  Identities=24%  Similarity=0.282  Sum_probs=62.7

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhh-HH----HHHhcCCce-EE--cCCCCChhHHHHHHHHcC--
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR-FE----EAKKFGVTD-FV--NTSEHDRPIQEVIAEMTN--  237 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~-~~----~~~~lg~~~-v~--~~~~~~~~~~~~i~~~~~--  237 (354)
                      .++++||+|+ |++|.+.++.+...|+ +|++++++.++ .+    .+++.|... .+  |..+. .++.+.+.+...  
T Consensus        28 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~  105 (283)
T 1g0o_A           28 EGKVALVTGAGRGIGREMAMELGRRGC-KVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVV-EDIVRMFEEAVKIF  105 (283)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCH-HHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCH-HHHHHHHHHHHHHc
Confidence            4688999987 9999999998888999 88888877643 22    234445432 22  22221 122222222211  


Q ss_pred             CCccEEEEcccCh----------H---------------hHHHHHHHhhCCCceEEEEcCC
Q 018529          238 GGVDRSVECTGNI----------D---------------NMISAFECVHDGWGVAVLVGVP  273 (354)
Q Consensus       238 ~~~dvv~d~~g~~----------~---------------~~~~~~~~l~~~~g~~v~~g~~  273 (354)
                      +++|++++++|..          +               ..+.+...+... |++++++..
T Consensus       106 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-g~iv~isS~  165 (283)
T 1g0o_A          106 GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIG-GRLILMGSI  165 (283)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTT-CEEEEECCG
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcC-CeEEEEech
Confidence            4799999998742          1               123344455555 899999864

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=97.18  E-value=0.002  Score=56.75  Aligned_cols=79  Identities=18%  Similarity=0.168  Sum_probs=52.4

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCC--c-eEE--cCCCCChhHHHHHHHHc--
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGV--T-DFV--NTSEHDRPIQEVIAEMT--  236 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~--~-~v~--~~~~~~~~~~~~i~~~~--  236 (354)
                      .++++||+|+ |++|...+..+...|+ +|++++++.++.+.+.+    .+.  . .++  |..+. ..+.+.+.+..  
T Consensus         7 ~~k~vlVTGas~gIG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~   84 (319)
T 3ioy_A            7 AGRTAFVTGGANGVGIGLVRQLLNQGC-KVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASR-EGFKMAADEVEAR   84 (319)
T ss_dssp             TTCEEEEETTTSTHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCH-HHHHHHHHHHHHH
T ss_pred             CCCEEEEcCCchHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCH-HHHHHHHHHHHHh
Confidence            4789999987 9999999888888999 89999999887665432    232  1 122  33322 12333333221  


Q ss_pred             CCCccEEEEcccC
Q 018529          237 NGGVDRSVECTGN  249 (354)
Q Consensus       237 ~~~~dvv~d~~g~  249 (354)
                      .+++|++++++|.
T Consensus        85 ~g~id~lv~nAg~   97 (319)
T 3ioy_A           85 FGPVSILCNNAGV   97 (319)
T ss_dssp             TCCEEEEEECCCC
T ss_pred             CCCCCEEEECCCc
Confidence            2479999999883

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=97.18  E-value=0.0033  Score=53.93  Aligned_cols=79  Identities=19%  Similarity=0.247  Sum_probs=51.9

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH----hcCCc-eE--EcCCCCChhHHHHHHHHcC--C
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVT-DF--VNTSEHDRPIQEVIAEMTN--G  238 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~----~lg~~-~v--~~~~~~~~~~~~~i~~~~~--~  238 (354)
                      .++++||+|+ |++|.+.+..+...|+ +|+++++++++.+.+.    +.+.. ..  .|..+. ..+.+.+.+...  +
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~-~~v~~~~~~~~~~~g  104 (270)
T 3ftp_A           27 DKQVAIVTGASRGIGRAIALELARRGA-MVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDA-TAVDALVESTLKEFG  104 (270)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCH-HHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCH-HHHHHHHHHHHHHcC
Confidence            5688999987 9999999988888999 8999999987765442    23432 22  233332 122222222211  3


Q ss_pred             CccEEEEcccC
Q 018529          239 GVDRSVECTGN  249 (354)
Q Consensus       239 ~~dvv~d~~g~  249 (354)
                      ++|++++++|.
T Consensus       105 ~iD~lvnnAg~  115 (270)
T 3ftp_A          105 ALNVLVNNAGI  115 (270)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999873

>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*

Probab=97.17  E-value=0.0021  Score=54.70  Aligned_cols=102  Identities=16%  Similarity=0.099  Sum_probs=72.1

Q ss_pred             hhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCc----eEEcCCCCChhHHHHHHHHc
Q 018529          161 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT----DFVNTSEHDRPIQEVIAEMT  236 (354)
Q Consensus       161 l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~----~v~~~~~~~~~~~~~i~~~~  236 (354)
                      +.....++++.+||-+|+| .|..+..+++..+. +|++++.+++..+.+++....    .++..+-.+  +     .+.
T Consensus        47 ~~~~~~~~~~~~vLdiG~G-~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~--~-----~~~  117 (266)
T 3ujc_A           47 ILSDIELNENSKVLDIGSG-LGGGCMYINEKYGA-HTHGIDICSNIVNMANERVSGNNKIIFEANDILT--K-----EFP  117 (266)
T ss_dssp             HTTTCCCCTTCEEEEETCT-TSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTT--C-----CCC
T ss_pred             HHHhcCCCCCCEEEEECCC-CCHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhhcCCCeEEEECcccc--C-----CCC
Confidence            3456678899999999998 68888899998787 999999999999998875432    122111111  0     112


Q ss_pred             CCCccEEEEcccC--------hHhHHHHHHHhhCCCceEEEEcC
Q 018529          237 NGGVDRSVECTGN--------IDNMISAFECVHDGWGVAVLVGV  272 (354)
Q Consensus       237 ~~~~dvv~d~~g~--------~~~~~~~~~~l~~~~g~~v~~g~  272 (354)
                      .+.+|+|+....-        ...+..+.+.|+++ |++++...
T Consensus       118 ~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pg-G~l~~~~~  160 (266)
T 3ujc_A          118 ENNFDLIYSRDAILALSLENKNKLFQKCYKWLKPT-GTLLITDY  160 (266)
T ss_dssp             TTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             CCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCC-CEEEEEEe
Confidence            2479999975321        23577888899997 99887754

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=97.17  E-value=0.0031  Score=53.64  Aligned_cols=79  Identities=13%  Similarity=0.233  Sum_probs=51.7

Q ss_pred             CCCeEEEEcC-C--hhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH----hcCCc--eE--EcCCCCC--hhHHHHHHHH
Q 018529          169 RGSSVAVFGL-G--AVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVT--DF--VNTSEHD--RPIQEVIAEM  235 (354)
Q Consensus       169 ~~~~vlI~G~-g--~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~----~lg~~--~v--~~~~~~~--~~~~~~i~~~  235 (354)
                      +|+++||+|+ |  ++|.+.++.+...|+ +|+.+++++++.+.+.    +++..  ..  .|..+.+  ..+.+.+.+.
T Consensus         5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga-~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (256)
T 4fs3_A            5 ENKTYVIMGIANKRSIAFGVAKVLDQLGA-KLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKD   83 (256)
T ss_dssp             TTCEEEEECCCSTTCHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            5789999996 5  799999888889999 8999999987765543    34432  22  2333321  1122222222


Q ss_pred             cCCCccEEEEcccC
Q 018529          236 TNGGVDRSVECTGN  249 (354)
Q Consensus       236 ~~~~~dvv~d~~g~  249 (354)
                      . |++|++++++|.
T Consensus        84 ~-G~iD~lvnnAg~   96 (256)
T 4fs3_A           84 V-GNIDGVYHSIAF   96 (256)
T ss_dssp             H-CCCSEEEECCCC
T ss_pred             h-CCCCEEEecccc
Confidence            2 479999998873

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=97.16  E-value=0.0038  Score=53.41  Aligned_cols=80  Identities=23%  Similarity=0.308  Sum_probs=53.4

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-HhcCCceE-EcCCCCC-hhHHHHHHHHcC--CCccE
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTDF-VNTSEHD-RPIQEVIAEMTN--GGVDR  242 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~~lg~~~v-~~~~~~~-~~~~~~i~~~~~--~~~dv  242 (354)
                      .++++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+ ++++.... +..+-.+ .++.+.+.+...  +++|+
T Consensus        26 ~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  104 (266)
T 3grp_A           26 TGRKALVTGATGGIGEAIARCFHAQGA-IVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREMEGIDI  104 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTSCCE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHHcCCCCE
Confidence            5789999987 9999999999889999 899999988876654 44565332 2121122 122222222211  37999


Q ss_pred             EEEcccC
Q 018529          243 SVECTGN  249 (354)
Q Consensus       243 v~d~~g~  249 (354)
                      +++++|.
T Consensus       105 lvnnAg~  111 (266)
T 3grp_A          105 LVNNAGI  111 (266)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999885

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=97.16  E-value=0.0036  Score=53.26  Aligned_cols=79  Identities=27%  Similarity=0.323  Sum_probs=53.1

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-HhcCCce-EE--cCCCCChhHHHHHHHHc--CCCcc
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTD-FV--NTSEHDRPIQEVIAEMT--NGGVD  241 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~~lg~~~-v~--~~~~~~~~~~~~i~~~~--~~~~d  241 (354)
                      .++++||+|+ |++|...++.+...|+ +|++++++.++.+.+ ++++... .+  |..+. .++.+.+.+..  .+++|
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~-~~v~~~~~~~~~~~g~id   84 (259)
T 4e6p_A            7 EGKSALITGSARGIGRAFAEAYVREGA-TVAIADIDIERARQAAAEIGPAAYAVQMDVTRQ-DSIDAAIAATVEHAGGLD   84 (259)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTCH-HHHHHHHHHHHHHSSSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCH-HHHHHHHHHHHHHcCCCC
Confidence            4789999987 9999999888888999 899999988876654 4454432 22  33222 12222232221  23799


Q ss_pred             EEEEcccC
Q 018529          242 RSVECTGN  249 (354)
Q Consensus       242 vv~d~~g~  249 (354)
                      ++++++|.
T Consensus        85 ~lv~~Ag~   92 (259)
T 4e6p_A           85 ILVNNAAL   92 (259)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCc
Confidence            99999884

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=97.15  E-value=0.0048  Score=53.65  Aligned_cols=104  Identities=19%  Similarity=0.214  Sum_probs=64.8

Q ss_pred             CCCCeEEEEcC-Ch--hHHHHHHHHHHcCCcEEEEEcCChhhHHHHH----hcCCceEE--cCCCCChhHHHHHHHHc--
Q 018529          168 ERGSSVAVFGL-GA--VGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTDFV--NTSEHDRPIQEVIAEMT--  236 (354)
Q Consensus       168 ~~~~~vlI~G~-g~--~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~----~lg~~~v~--~~~~~~~~~~~~i~~~~--  236 (354)
                      -.++++||+|+ |.  +|.+.++.+...|+ +|++++++++..+.++    +.+....+  |..+. ..+.+.+++..  
T Consensus        29 l~gk~~lVTGasg~~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~-~~v~~~~~~~~~~  106 (293)
T 3grk_A           29 LQGKRGLILGVANNRSIAWGIAKAAREAGA-ELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADA-ASIDAVFETLEKK  106 (293)
T ss_dssp             TTTCEEEEECCCSSSSHHHHHHHHHHHTTC-EEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCH-HHHHHHHHHHHHH
T ss_pred             CCCCEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCH-HHHHHHHHHHHHh
Confidence            45789999986 66  99999888888999 8988988865444433    23432333  33222 12222222221  


Q ss_pred             CCCccEEEEcccChH-----------------------------hHHHHHHHhhCCCceEEEEcCCC
Q 018529          237 NGGVDRSVECTGNID-----------------------------NMISAFECVHDGWGVAVLVGVPS  274 (354)
Q Consensus       237 ~~~~dvv~d~~g~~~-----------------------------~~~~~~~~l~~~~g~~v~~g~~~  274 (354)
                      .+++|++++++|...                             ..+.+...+... |+++.++...
T Consensus       107 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-g~Iv~isS~~  172 (293)
T 3grk_A          107 WGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADG-GSILTLTYYG  172 (293)
T ss_dssp             TSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTC-EEEEEEECGG
T ss_pred             cCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCC-CEEEEEeehh
Confidence            147999999987421                             223344455665 9999988643

>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}

Probab=97.15  E-value=0.00047  Score=58.51  Aligned_cols=102  Identities=12%  Similarity=0.106  Sum_probs=70.4

Q ss_pred             CCCCCCeEEEEcCChhHHHHHHHHHHcC-CcEEEEEcCChhhHHHHHh----cCCc-eEEcCCCCChhHHHHHHHHcCC-
Q 018529          166 KPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKK----FGVT-DFVNTSEHDRPIQEVIAEMTNG-  238 (354)
Q Consensus       166 ~~~~~~~vlI~G~g~~G~~a~~~a~~~g-~~~vi~v~~~~~~~~~~~~----lg~~-~v~~~~~~~~~~~~~i~~~~~~-  238 (354)
                      .+.++.+||-+|+|. |..++.+|+.++ ..+|++++.+++..+.+++    .|.. .+- ....+  ..+.+..+... 
T Consensus        60 ~~~~~~~VLdiG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~-~~~~d--~~~~l~~~~~~~  135 (248)
T 3tfw_A           60 RLTQAKRILEIGTLG-GYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVT-LREGP--ALQSLESLGECP  135 (248)
T ss_dssp             HHHTCSEEEEECCTT-SHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEE-EEESC--HHHHHHTCCSCC
T ss_pred             hhcCCCEEEEecCCc-hHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEE-EEEcC--HHHHHHhcCCCC
Confidence            456789999999875 888889999874 3499999999998887765    3543 221 11222  44445544333 


Q ss_pred             CccEEEEcccC---hHhHHHHHHHhhCCCceEEEEcC
Q 018529          239 GVDRSVECTGN---IDNMISAFECVHDGWGVAVLVGV  272 (354)
Q Consensus       239 ~~dvv~d~~g~---~~~~~~~~~~l~~~~g~~v~~g~  272 (354)
                      .||+||-....   +..++.+.+.|+++ |.+++-..
T Consensus       136 ~fD~V~~d~~~~~~~~~l~~~~~~LkpG-G~lv~~~~  171 (248)
T 3tfw_A          136 AFDLIFIDADKPNNPHYLRWALRYSRPG-TLIIGDNV  171 (248)
T ss_dssp             CCSEEEECSCGGGHHHHHHHHHHTCCTT-CEEEEECC
T ss_pred             CeEEEEECCchHHHHHHHHHHHHhcCCC-eEEEEeCC
Confidence            79999843322   35688889999997 98877544

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=97.14  E-value=0.0035  Score=54.02  Aligned_cols=79  Identities=24%  Similarity=0.355  Sum_probs=52.8

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-HhcCCc-eEE--cCCCCC--hhHHHHHHHHcCCCcc
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVT-DFV--NTSEHD--RPIQEVIAEMTNGGVD  241 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~~lg~~-~v~--~~~~~~--~~~~~~i~~~~~~~~d  241 (354)
                      .++++||+|+ |++|.+.+..+...|+ +|+++++++++.+.+ ++++.. ..+  |..+.+  ..+.+.+.+.. +++|
T Consensus        28 ~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~iD  105 (277)
T 3gvc_A           28 AGKVAIVTGAGAGIGLAVARRLADEGC-HVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAF-GGVD  105 (277)
T ss_dssp             TTCEEEETTTTSTHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHH-SSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHHc-CCCC
Confidence            4788999987 9999998888888899 899999998876654 445542 222  333221  11222222222 3799


Q ss_pred             EEEEcccC
Q 018529          242 RSVECTGN  249 (354)
Q Consensus       242 vv~d~~g~  249 (354)
                      ++++++|.
T Consensus       106 ~lvnnAg~  113 (277)
T 3gvc_A          106 KLVANAGV  113 (277)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999884

>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*

Probab=97.14  E-value=0.0015  Score=56.46  Aligned_cols=101  Identities=16%  Similarity=0.146  Sum_probs=70.5

Q ss_pred             hhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhc----CCc-eEEcCCCCChhHHHHHHHH
Q 018529          161 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF----GVT-DFVNTSEHDRPIQEVIAEM  235 (354)
Q Consensus       161 l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~l----g~~-~v~~~~~~~~~~~~~i~~~  235 (354)
                      +.+...++++.+||-+|+|. |..+..+++..|. +|++++.+++..+.+++.    |.. .+- ....+  +    .++
T Consensus        56 ~~~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~gvd~s~~~~~~a~~~~~~~~~~~~~~-~~~~d--~----~~~  126 (287)
T 1kpg_A           56 ALGKLGLQPGMTLLDVGCGW-GATMMRAVEKYDV-NVVGLTLSKNQANHVQQLVANSENLRSKR-VLLAG--W----EQF  126 (287)
T ss_dssp             HHTTTTCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTCCCCSCEE-EEESC--G----GGC
T ss_pred             HHHHcCCCCcCEEEEECCcc-cHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCCCCeE-EEECC--h----hhC
Confidence            34566788999999999976 8888899988898 999999999988877653    321 111 11111  1    112


Q ss_pred             cCCCccEEEEc-----cc---ChHhHHHHHHHhhCCCceEEEEcC
Q 018529          236 TNGGVDRSVEC-----TG---NIDNMISAFECVHDGWGVAVLVGV  272 (354)
Q Consensus       236 ~~~~~dvv~d~-----~g---~~~~~~~~~~~l~~~~g~~v~~g~  272 (354)
                      . +.+|+|+..     .+   ....+..+.+.|+++ |++++...
T Consensus       127 ~-~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~  169 (287)
T 1kpg_A          127 D-EPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPAD-GVMLLHTI  169 (287)
T ss_dssp             C-CCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTT-CEEEEEEE
T ss_pred             C-CCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCC-CEEEEEEe
Confidence            2 579999865     22   135678889999997 99887643

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=97.14  E-value=0.0041  Score=51.93  Aligned_cols=79  Identities=19%  Similarity=0.208  Sum_probs=51.1

Q ss_pred             CCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH-hcCCceEEcCCCCC-hhHHHHHHHHcC--CCccEEE
Q 018529          170 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTDFVNTSEHD-RPIQEVIAEMTN--GGVDRSV  244 (354)
Q Consensus       170 ~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~-~lg~~~v~~~~~~~-~~~~~~i~~~~~--~~~dvv~  244 (354)
                      ++++||+|+ |.+|...+..+...|+ +|+++++++++.+.+. +++....+..+-.+ .++.+.+.+...  +++|+++
T Consensus         5 ~k~vlVtGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li   83 (234)
T 2ehd_A            5 KGAVLITGASRGIGEATARLLHAKGY-RVGLMARDEKRLQALAAELEGALPLPGDVREEGDWARAVAAMEEAFGELSALV   83 (234)
T ss_dssp             CCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhhceEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            568999987 9999999998888999 8999999887766543 34322222222222 123222322211  3799999


Q ss_pred             EcccC
Q 018529          245 ECTGN  249 (354)
Q Consensus       245 d~~g~  249 (354)
                      +++|.
T Consensus        84 ~~Ag~   88 (234)
T 2ehd_A           84 NNAGV   88 (234)
T ss_dssp             ECCCC
T ss_pred             ECCCc
Confidence            99873

>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}

Probab=97.13  E-value=0.0016  Score=54.25  Aligned_cols=102  Identities=15%  Similarity=0.085  Sum_probs=69.7

Q ss_pred             CCCCCCeEEEEcCChhHHHHHHHHHHcC-----CcEEEEEcCChhhHHHHHhc----C-----CceE-EcCCCCChhHHH
Q 018529          166 KPERGSSVAVFGLGAVGLAAAEGARIAG-----ASRIIGVDRSSKRFEEAKKF----G-----VTDF-VNTSEHDRPIQE  230 (354)
Q Consensus       166 ~~~~~~~vlI~G~g~~G~~a~~~a~~~g-----~~~vi~v~~~~~~~~~~~~l----g-----~~~v-~~~~~~~~~~~~  230 (354)
                      .++++++||-+|+|. |..+..+++..+     ..+|++++.+++..+.+++.    +     ...+ +...+....+.+
T Consensus        77 ~~~~~~~VLdiG~G~-G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~  155 (227)
T 2pbf_A           77 VLKPGSRAIDVGSGS-GYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEE  155 (227)
T ss_dssp             TSCTTCEEEEESCTT-SHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHH
T ss_pred             hCCCCCEEEEECCCC-CHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccc
Confidence            578999999999986 888999999876     12999999999888877652    3     2222 111111111111


Q ss_pred             HHHHHcCCCccEEEEcccChHhHHHHHHHhhCCCceEEEEc
Q 018529          231 VIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVG  271 (354)
Q Consensus       231 ~i~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g  271 (354)
                      ...  ..+.||+|+........++.+.+.|+++ |++++.-
T Consensus       156 ~~~--~~~~fD~I~~~~~~~~~~~~~~~~Lkpg-G~lv~~~  193 (227)
T 2pbf_A          156 EKK--ELGLFDAIHVGASASELPEILVDLLAEN-GKLIIPI  193 (227)
T ss_dssp             HHH--HHCCEEEEEECSBBSSCCHHHHHHEEEE-EEEEEEE
T ss_pred             cCc--cCCCcCEEEECCchHHHHHHHHHhcCCC-cEEEEEE
Confidence            001  1247999998877667788999999997 9887664

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=97.13  E-value=0.0033  Score=53.11  Aligned_cols=80  Identities=25%  Similarity=0.287  Sum_probs=50.9

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-HhcC---CceEEcCCCCC-hhHHHHHHHHcC--CCc
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFG---VTDFVNTSEHD-RPIQEVIAEMTN--GGV  240 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~~lg---~~~v~~~~~~~-~~~~~~i~~~~~--~~~  240 (354)
                      +++++||+|+ |.+|...+..+...|+ +|+++++++++.+.+ +++.   .-..+..+-.+ ..+.+.+.+...  +++
T Consensus         5 ~~k~vlVtGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   83 (251)
T 1zk4_A            5 DGKVAIITGGTLGIGLAIATKFVEEGA-KVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPV   83 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            4678999987 9999999998888999 899999988766544 3332   11222222122 123222322211  369


Q ss_pred             cEEEEcccC
Q 018529          241 DRSVECTGN  249 (354)
Q Consensus       241 dvv~d~~g~  249 (354)
                      |++|+++|.
T Consensus        84 d~li~~Ag~   92 (251)
T 1zk4_A           84 STLVNNAGI   92 (251)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999873

>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1

Probab=97.13  E-value=0.00078  Score=56.20  Aligned_cols=103  Identities=15%  Similarity=0.137  Sum_probs=70.3

Q ss_pred             cCCCCCCeEEEEcCChhHHHHHHHHHHcC-CcEEEEEcCChhhHHHHHh----cCCc-eEEcCCCCChhHHHHHHHHcC-
Q 018529          165 AKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKK----FGVT-DFVNTSEHDRPIQEVIAEMTN-  237 (354)
Q Consensus       165 ~~~~~~~~vlI~G~g~~G~~a~~~a~~~g-~~~vi~v~~~~~~~~~~~~----lg~~-~v~~~~~~~~~~~~~i~~~~~-  237 (354)
                      ....++++||-+|+| .|..++.+++.++ ..+|++++.+++..+.+++    .|.. .+- ....+  ..+.+..+.. 
T Consensus        65 ~~~~~~~~vLdiG~G-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~-~~~~d--~~~~~~~~~~~  140 (229)
T 2avd_A           65 ARLIQAKKALDLGTF-TGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKID-LRLKP--ALETLDELLAA  140 (229)
T ss_dssp             HHHTTCCEEEEECCT-TSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEE-EEESC--HHHHHHHHHHT
T ss_pred             HHhcCCCEEEEEcCC-ccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEE-EEEcC--HHHHHHHHHhc
Confidence            345678899999998 6889999999764 3399999999998887765    3442 221 11122  4444444321 


Q ss_pred             ---CCccEEEEcccC---hHhHHHHHHHhhCCCceEEEEcC
Q 018529          238 ---GGVDRSVECTGN---IDNMISAFECVHDGWGVAVLVGV  272 (354)
Q Consensus       238 ---~~~dvv~d~~g~---~~~~~~~~~~l~~~~g~~v~~g~  272 (354)
                         +.+|+|+.....   ...++.+.+.|+++ |.+++...
T Consensus       141 ~~~~~~D~v~~d~~~~~~~~~l~~~~~~L~pg-G~lv~~~~  180 (229)
T 2avd_A          141 GEAGTFDVAVVDADKENCSAYYERCLQLLRPG-GILAVLRV  180 (229)
T ss_dssp             TCTTCEEEEEECSCSTTHHHHHHHHHHHEEEE-EEEEEECC
T ss_pred             CCCCCccEEEECCCHHHHHHHHHHHHHHcCCC-eEEEEECC
Confidence               479999865433   25688899999997 99887643

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=97.11  E-value=0.0034  Score=53.08  Aligned_cols=79  Identities=29%  Similarity=0.420  Sum_probs=52.7

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh-cCCc-e--EEcCCCCChhHHHHHHHHcC--CCcc
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVT-D--FVNTSEHDRPIQEVIAEMTN--GGVD  241 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~-lg~~-~--v~~~~~~~~~~~~~i~~~~~--~~~d  241 (354)
                      .++++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+.+ ++.. .  ..|..+.+ ++.+.+++...  +++|
T Consensus         8 ~gk~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~-~v~~~~~~~~~~~g~iD   85 (248)
T 3op4_A            8 EGKVALVTGASRGIGKAIAELLAERGA-KVIGTATSESGAQAISDYLGDNGKGMALNVTNPE-SIEAVLKAITDEFGGVD   85 (248)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHH-HHHHHHHHHHHHHCCCS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcccceEEEEeCCCHH-HHHHHHHHHHHHcCCCC
Confidence            5788999987 9999999998889999 89999999887665533 3322 1  22333321 22222322211  4799


Q ss_pred             EEEEcccC
Q 018529          242 RSVECTGN  249 (354)
Q Consensus       242 vv~d~~g~  249 (354)
                      ++++++|.
T Consensus        86 ~lv~nAg~   93 (248)
T 3op4_A           86 ILVNNAGI   93 (248)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999884

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.11  E-value=0.0026  Score=55.44  Aligned_cols=79  Identities=30%  Similarity=0.393  Sum_probs=51.1

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH----hcCC---c-eEE--cCCCCChhHHHHHHHHc-
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGV---T-DFV--NTSEHDRPIQEVIAEMT-  236 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~----~lg~---~-~v~--~~~~~~~~~~~~i~~~~-  236 (354)
                      .++++||+|+ |++|.+.+..+...|+ +|+++++++++.+.+.    +.+.   . ..+  |..+. .++.+.+.+.. 
T Consensus        25 ~~k~vlVTGas~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~-~~v~~~~~~~~~  102 (297)
T 1xhl_A           25 SGKSVIITGSSNGIGRSAAVIFAKEGA-QVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEA-SGQDDIINTTLA  102 (297)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSH-HHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCH-HHHHHHHHHHHH
Confidence            4688999987 9999999988888999 8999999987765432    2232   2 122  33222 12222222221 


Q ss_pred             -CCCccEEEEcccC
Q 018529          237 -NGGVDRSVECTGN  249 (354)
Q Consensus       237 -~~~~dvv~d~~g~  249 (354)
                       .+++|++++++|.
T Consensus       103 ~~g~iD~lvnnAG~  116 (297)
T 1xhl_A          103 KFGKIDILVNNAGA  116 (297)
T ss_dssp             HHSCCCEEEECCCC
T ss_pred             hcCCCCEEEECCCc
Confidence             1479999999873

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=97.11  E-value=0.0025  Score=52.80  Aligned_cols=99  Identities=10%  Similarity=0.071  Sum_probs=62.1

Q ss_pred             CeEEEEcC-ChhHHHHHHHHH-HcCCcEEEEEcCChh-hHHHHHhcCCc-eEEcCCCCChhHHHHHHHHcCCCccEEEEc
Q 018529          171 SSVAVFGL-GAVGLAAAEGAR-IAGASRIIGVDRSSK-RFEEAKKFGVT-DFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  246 (354)
Q Consensus       171 ~~vlI~G~-g~~G~~a~~~a~-~~g~~~vi~v~~~~~-~~~~~~~lg~~-~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~  246 (354)
                      ++|||+|+ |.+|...++.+. ..|+ +|++++++++ +.+.+.+.+.. .++..+-.+.   +.+.+... ++|+||++
T Consensus         6 k~vlVtGasg~iG~~~~~~l~~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~---~~~~~~~~-~~d~vv~~   80 (221)
T 3r6d_A            6 XYITILGAAGQIAQXLTATLLTYTDM-HITLYGRQLKTRIPPEIIDHERVTVIEGSFQNP---GXLEQAVT-NAEVVFVG   80 (221)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHHCCC-EEEEEESSHHHHSCHHHHTSTTEEEEECCTTCH---HHHHHHHT-TCSEEEES
T ss_pred             EEEEEEeCCcHHHHHHHHHHHhcCCc-eEEEEecCccccchhhccCCCceEEEECCCCCH---HHHHHHHc-CCCEEEEc
Confidence            46999997 999999888887 8999 8999999988 66555322221 2222222221   23333332 68999999


Q ss_pred             ccChHh-HHHHHHHhhCC-CceEEEEcCCC
Q 018529          247 TGNIDN-MISAFECVHDG-WGVAVLVGVPS  274 (354)
Q Consensus       247 ~g~~~~-~~~~~~~l~~~-~g~~v~~g~~~  274 (354)
                      +|.... ...+++.+... .+++++++...
T Consensus        81 ag~~n~~~~~~~~~~~~~~~~~iv~iSs~~  110 (221)
T 3r6d_A           81 AMESGSDMASIVKALSRXNIRRVIGVSMAG  110 (221)
T ss_dssp             CCCCHHHHHHHHHHHHHTTCCEEEEEEETT
T ss_pred             CCCCChhHHHHHHHHHhcCCCeEEEEeece
Confidence            986211 34445545432 26888887643

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=97.11  E-value=0.005  Score=53.03  Aligned_cols=79  Identities=24%  Similarity=0.289  Sum_probs=53.0

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-HhcCCceE---EcCCCCChhHHHHHHHHcC--CCcc
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTDF---VNTSEHDRPIQEVIAEMTN--GGVD  241 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~~lg~~~v---~~~~~~~~~~~~~i~~~~~--~~~d  241 (354)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+ ++++....   .|..+. .++.+.+.+...  +++|
T Consensus        26 ~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~-~~v~~~~~~~~~~~g~iD  103 (277)
T 4dqx_A           26 NQRVCIVTGGGSGIGRATAELFAKNGA-YVVVADVNEDAAVRVANEIGSKAFGVRVDVSSA-KDAESMVEKTTAKWGRVD  103 (277)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHCTTEEEEECCTTCH-HHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceEEEEecCCCH-HHHHHHHHHHHHHcCCCC
Confidence            4789999987 9999999988889999 899999998876654 34554322   222222 122222222211  3799


Q ss_pred             EEEEcccC
Q 018529          242 RSVECTGN  249 (354)
Q Consensus       242 vv~d~~g~  249 (354)
                      ++++++|.
T Consensus       104 ~lv~nAg~  111 (277)
T 4dqx_A          104 VLVNNAGF  111 (277)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCc
Confidence            99999884

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=97.10  E-value=0.0051  Score=52.60  Aligned_cols=79  Identities=22%  Similarity=0.329  Sum_probs=52.2

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH----hcCCceE---EcCCCCChhHHHHHHHHc--CC
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTDF---VNTSEHDRPIQEVIAEMT--NG  238 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~----~lg~~~v---~~~~~~~~~~~~~i~~~~--~~  238 (354)
                      .++++||+|+ |++|.+.+..+...|+ +|+++++++++.+.+.    +.+....   .|..+. .++.+.+++..  .+
T Consensus         3 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~-~~v~~~~~~~~~~~g   80 (264)
T 3tfo_A            3 MDKVILITGASGGIGEGIARELGVAGA-KILLGARRQARIEAIATEIRDAGGTALAQVLDVTDR-HSVAAFAQAAVDTWG   80 (264)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCH-HHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCH-HHHHHHHHHHHHHcC
Confidence            4678999987 9999999988888999 8999999988766542    2344322   233322 12222222221  14


Q ss_pred             CccEEEEcccC
Q 018529          239 GVDRSVECTGN  249 (354)
Q Consensus       239 ~~dvv~d~~g~  249 (354)
                      ++|++++++|.
T Consensus        81 ~iD~lVnnAG~   91 (264)
T 3tfo_A           81 RIDVLVNNAGV   91 (264)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999874

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=97.09  E-value=0.0051  Score=51.66  Aligned_cols=77  Identities=21%  Similarity=0.256  Sum_probs=51.9

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH-hcCCceEEcCCCCChhHHHHHHHHcC--CCccEEE
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTDFVNTSEHDRPIQEVIAEMTN--GGVDRSV  244 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~-~lg~~~v~~~~~~~~~~~~~i~~~~~--~~~dvv~  244 (354)
                      +++++||+|+ |.+|...++.+...|+ +|+++++++++.+.+. ++....++..+-.+.+   .++++..  +++|++|
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~---~~~~~~~~~~~id~vi   81 (244)
T 3d3w_A            6 AGRRVLVTGAGKGIGRGTVQALHATGA-RVVAVSRTQADLDSLVRECPGIEPVCVDLGDWE---ATERALGSVGPVDLLV   81 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCTTCHH---HHHHHHTTCCCCCEEE
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCCCEEEEeCCCHH---HHHHHHHHcCCCCEEE
Confidence            4789999987 9999999999989999 8999999987766543 3322233322222211   2222222  3689999


Q ss_pred             EcccC
Q 018529          245 ECTGN  249 (354)
Q Consensus       245 d~~g~  249 (354)
                      +++|.
T Consensus        82 ~~Ag~   86 (244)
T 3d3w_A           82 NNAAV   86 (244)
T ss_dssp             ECCCC
T ss_pred             ECCcc
Confidence            99874

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=97.08  E-value=0.0047  Score=53.61  Aligned_cols=79  Identities=20%  Similarity=0.277  Sum_probs=49.8

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhh-HHH----HHhcCCceE-E--cCCCCChhHHHHHHHHcC--
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR-FEE----AKKFGVTDF-V--NTSEHDRPIQEVIAEMTN--  237 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~-~~~----~~~lg~~~v-~--~~~~~~~~~~~~i~~~~~--  237 (354)
                      .|+++||+|+ |++|.+.++.+...|+ +|++++++.++ .+.    +++.|.... +  |..+. .++.+.+.+...  
T Consensus        46 ~gk~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~-~~v~~~~~~~~~~~  123 (291)
T 3ijr_A           46 KGKNVLITGGDSGIGRAVSIAFAKEGA-NIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDE-QHCKDIVQETVRQL  123 (291)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSH-HHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCH-HHHHHHHHHHHHHc
Confidence            5789999987 9999999998888999 88888877653 222    233454322 2  22221 122222222211  


Q ss_pred             CCccEEEEcccC
Q 018529          238 GGVDRSVECTGN  249 (354)
Q Consensus       238 ~~~dvv~d~~g~  249 (354)
                      +++|++++++|.
T Consensus       124 g~iD~lvnnAg~  135 (291)
T 3ijr_A          124 GSLNILVNNVAQ  135 (291)
T ss_dssp             SSCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            379999998763

>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*

Probab=97.08  E-value=0.0023  Score=56.87  Aligned_cols=48  Identities=40%  Similarity=0.459  Sum_probs=41.9

Q ss_pred             CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCc
Q 018529          168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT  216 (354)
Q Consensus       168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~  216 (354)
                      -+|++|.|.|.|.+|..+++.++.+|+ +|++.+.+.++.++.+++|+.
T Consensus       173 L~GktV~I~G~GnVG~~~A~~l~~~Ga-kVvvsD~~~~~~~~a~~~ga~  220 (355)
T 1c1d_A          173 LDGLTVLVQGLGAVGGSLASLAAEAGA-QLLVADTDTERVAHAVALGHT  220 (355)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCE
T ss_pred             CCCCEEEEECcCHHHHHHHHHHHHCCC-EEEEEeCCccHHHHHHhcCCE
Confidence            578999999999999999999999999 888998888776677777764

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=97.08  E-value=0.0055  Score=52.58  Aligned_cols=80  Identities=16%  Similarity=0.263  Sum_probs=50.9

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-HhcCC---ceEEcCCCCC-hhHHHHHHHHc--CCCc
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGV---TDFVNTSEHD-RPIQEVIAEMT--NGGV  240 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~~lg~---~~v~~~~~~~-~~~~~~i~~~~--~~~~  240 (354)
                      .++++||+|+ |.+|...++.+...|+ +|++++++.++.+.+ ++++.   ..++..+-.+ ..+.+.+.+..  .+++
T Consensus        15 ~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   93 (278)
T 2bgk_A           15 QDKVAIITGGAGGIGETTAKLFVRYGA-KVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKL   93 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            4678999987 9999999988888999 899998887765443 33432   1222222122 12222232221  1379


Q ss_pred             cEEEEcccC
Q 018529          241 DRSVECTGN  249 (354)
Q Consensus       241 dvv~d~~g~  249 (354)
                      |++|+++|.
T Consensus        94 d~li~~Ag~  102 (278)
T 2bgk_A           94 DIMFGNVGV  102 (278)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCcc
Confidence            999998873

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=97.08  E-value=0.0025  Score=53.80  Aligned_cols=79  Identities=23%  Similarity=0.346  Sum_probs=52.9

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-HhcCCceE-EcCCCCChhHHHHHHHHcC--CCccEE
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTDF-VNTSEHDRPIQEVIAEMTN--GGVDRS  243 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~~lg~~~v-~~~~~~~~~~~~~i~~~~~--~~~dvv  243 (354)
                      .++++||+|+ |++|...++.+...|+ +|+++++++++.+.+ +++|+..+ .|..+. .++.+.+.+...  +++|++
T Consensus         4 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~g~id~l   81 (245)
T 1uls_A            4 KDKAVLITGAAHGIGRATLELFAKEGA-RLVACDIEEGPLREAAEAVGAHPVVMDVADP-ASVERGFAEALAHLGRLDGV   81 (245)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTTCEEEECCTTCH-HHHHHHHHHHHHHHSSCCEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCEEEEecCCCH-HHHHHHHHHHHHHcCCCCEE
Confidence            4678999987 9999999998888999 899999998876654 44564322 233322 122222222211  369999


Q ss_pred             EEcccC
Q 018529          244 VECTGN  249 (354)
Q Consensus       244 ~d~~g~  249 (354)
                      ++++|.
T Consensus        82 vn~Ag~   87 (245)
T 1uls_A           82 VHYAGI   87 (245)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999883

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=97.08  E-value=0.005  Score=52.51  Aligned_cols=79  Identities=23%  Similarity=0.328  Sum_probs=51.6

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH----hcCCce-EE--cCCCCChhHHHHHHHHcC--C
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD-FV--NTSEHDRPIQEVIAEMTN--G  238 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~----~lg~~~-v~--~~~~~~~~~~~~i~~~~~--~  238 (354)
                      .++++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+.    +.|... .+  |..+. .++.+.+.+...  +
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~g   83 (262)
T 1zem_A            6 NGKVCLVTGAGGNIGLATALRLAEEGT-AIALLDMNREALEKAEASVREKGVEARSYVCDVTSE-EAVIGTVDSVVRDFG   83 (262)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCH-HHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCH-HHHHHHHHHHHHHhC
Confidence            4688999987 9999999999999999 8999999887765432    234322 22  33222 122222222211  4


Q ss_pred             CccEEEEcccC
Q 018529          239 GVDRSVECTGN  249 (354)
Q Consensus       239 ~~dvv~d~~g~  249 (354)
                      ++|++++++|.
T Consensus        84 ~id~lv~nAg~   94 (262)
T 1zem_A           84 KIDFLFNNAGY   94 (262)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999874

>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}

Probab=97.07  E-value=0.0039  Score=55.51  Aligned_cols=135  Identities=15%  Similarity=0.177  Sum_probs=81.2

Q ss_pred             CeEEEEcCChhHHHHHHHHH-Hc-CCcEEEEEcCChhhHHH-HHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcc
Q 018529          171 SSVAVFGLGAVGLAAAEGAR-IA-GASRIIGVDRSSKRFEE-AKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  247 (354)
Q Consensus       171 ~~vlI~G~g~~G~~a~~~a~-~~-g~~~vi~v~~~~~~~~~-~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~  247 (354)
                      -+|.|+|+|.+|...++.++ .. +.+.+.+.++++++.+. ++++|+..++.  +    +.+.+.   ...+|+|+.|+
T Consensus         9 ~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~~~g~~~~~~--~----~~~~l~---~~~~D~V~i~t   79 (346)
T 3cea_A            9 LRAAIIGLGRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNELGVETTYT--N----YKDMID---TENIDAIFIVA   79 (346)
T ss_dssp             EEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHHTTCCSEEES--C----HHHHHT---TSCCSEEEECS
T ss_pred             ceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHhCCCcccC--C----HHHHhc---CCCCCEEEEeC
Confidence            47899999999998888776 43 66334566888887754 56678754432  1    333221   12799999999


Q ss_pred             cChHhHHHHHHHhhCCCceEEEEcCCCCCceeecc--hhhhc--c-ccEEEEEeccCCCCCCCHHHHHHHHHccCCC
Q 018529          248 GNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTK--PINVL--N-ERTLKGTFFGNYKPRTDLPSVVDMYMNKQLE  319 (354)
Q Consensus       248 g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~--~~~~~--~-~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~  319 (354)
                      +.....+.+..++..  |+-+++..+.. ......  .....  + ++.+.-.+  ..+....+..+.+++.+|.+.
T Consensus        80 p~~~h~~~~~~al~~--G~~v~~eKp~~-~~~~~~~~l~~~a~~~~~~~~~~~~--~~r~~p~~~~~~~~i~~g~iG  151 (346)
T 3cea_A           80 PTPFHPEMTIYAMNA--GLNVFCEKPLG-LDFNEVDEMAKVIKSHPNQIFQSGF--MRRYDDSYRYAKKIVDNGDIG  151 (346)
T ss_dssp             CGGGHHHHHHHHHHT--TCEEEECSCCC-SCHHHHHHHHHHHHTCTTSCEECCC--GGGTCHHHHHHHHHHHTTTTC
T ss_pred             ChHhHHHHHHHHHHC--CCEEEEcCCCC-CCHHHHHHHHHHHHhCCCCeEEEec--ccccCHHHHHHHHHHHcCCCC
Confidence            987788888888887  56566654321 111100  11111  3 44443222  122223478888888888653

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=97.07  E-value=0.0035  Score=53.89  Aligned_cols=80  Identities=20%  Similarity=0.236  Sum_probs=52.1

Q ss_pred             CCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-HhcCCc-eEE--cCCCCChhHHHHHHHHcC--CCc
Q 018529          168 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVT-DFV--NTSEHDRPIQEVIAEMTN--GGV  240 (354)
Q Consensus       168 ~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~~lg~~-~v~--~~~~~~~~~~~~i~~~~~--~~~  240 (354)
                      ..++++||+|+ |++|.+.+..+...|+ +|+.+++++++.+.+ ++++.. ..+  |..+. .++.+.+++...  +++
T Consensus        26 ~~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~-~~v~~~~~~~~~~~g~i  103 (272)
T 4dyv_A           26 TGKKIAIVTGAGSGVGRAVAVALAGAGY-GVALAGRRLDALQETAAEIGDDALCVPTDVTDP-DSVRALFTATVEKFGRV  103 (272)
T ss_dssp             --CCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTSCCEEEECCTTSH-HHHHHHHHHHHHHHSCC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCCeEEEEecCCCH-HHHHHHHHHHHHHcCCC
Confidence            35788999987 9999999888888999 899999998876654 445432 222  33222 122222222211  479


Q ss_pred             cEEEEcccC
Q 018529          241 DRSVECTGN  249 (354)
Q Consensus       241 dvv~d~~g~  249 (354)
                      |++++++|.
T Consensus       104 D~lVnnAg~  112 (272)
T 4dyv_A          104 DVLFNNAGT  112 (272)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999874

>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*

Probab=97.07  E-value=0.00069  Score=54.46  Aligned_cols=101  Identities=12%  Similarity=0.140  Sum_probs=67.3

Q ss_pred             hcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCceEEcCCCCChhHHHHHHHHcCCC
Q 018529          164 VAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTNGG  239 (354)
Q Consensus       164 ~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~~~~~~  239 (354)
                      ...++++++||=+|+|. |..+..+++. +. +|++++.+++..+.+++    .|.+.+-.... +  . +.+....++.
T Consensus        17 ~~~~~~~~~vLDiGcG~-G~~~~~la~~-~~-~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~-~--~-~~l~~~~~~~   89 (185)
T 3mti_A           17 AEVLDDESIVVDATMGN-GNDTAFLAGL-SK-KVYAFDVQEQALGKTSQRLSDLGIENTELILD-G--H-ENLDHYVREP   89 (185)
T ss_dssp             HTTCCTTCEEEESCCTT-SHHHHHHHTT-SS-EEEEEESCHHHHHHHHHHHHHHTCCCEEEEES-C--G-GGGGGTCCSC
T ss_pred             HHhCCCCCEEEEEcCCC-CHHHHHHHHh-CC-EEEEEECCHHHHHHHHHHHHHcCCCcEEEEeC-c--H-HHHHhhccCC
Confidence            45678999999999875 8888888887 66 99999999988887754    34432211111 1  1 1122233347


Q ss_pred             ccEEEEcccC-----------h----HhHHHHHHHhhCCCceEEEEcC
Q 018529          240 VDRSVECTGN-----------I----DNMISAFECVHDGWGVAVLVGV  272 (354)
Q Consensus       240 ~dvv~d~~g~-----------~----~~~~~~~~~l~~~~g~~v~~g~  272 (354)
                      ||+|+...+.           +    ..+..+.+.|+++ |++++...
T Consensus        90 fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~i~~~  136 (185)
T 3mti_A           90 IRAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVG-GRLAIMIY  136 (185)
T ss_dssp             EEEEEEEEC-----------CHHHHHHHHHHHHHHEEEE-EEEEEEEC
T ss_pred             cCEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCC-cEEEEEEe
Confidence            9999765321           1    3457788899997 99887654

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=97.07  E-value=0.004  Score=56.85  Aligned_cols=96  Identities=13%  Similarity=0.218  Sum_probs=68.4

Q ss_pred             CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEccc
Q 018529          169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  248 (354)
Q Consensus       169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g  248 (354)
                      .+.+|+|.|.|.+|...++.++..|. .|++++.++++.+.+++.|...++ -+..+.   +.+++..-..+|+|+-+++
T Consensus         3 ~~~~viIiG~Gr~G~~va~~L~~~g~-~vvvId~d~~~v~~~~~~g~~vi~-GDat~~---~~L~~agi~~A~~viv~~~   77 (413)
T 3l9w_A            3 HGMRVIIAGFGRFGQITGRLLLSSGV-KMVVLDHDPDHIETLRKFGMKVFY-GDATRM---DLLESAGAAKAEVLINAID   77 (413)
T ss_dssp             -CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEECCHHHHHHHHHTTCCCEE-SCTTCH---HHHHHTTTTTCSEEEECCS
T ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHhCCCeEEE-cCCCCH---HHHHhcCCCccCEEEECCC
Confidence            45679999999999999999999998 999999999999999999986443 233322   2344443337999999998


Q ss_pred             ChHhHH---HHHHHhhCCCceEEEE
Q 018529          249 NIDNMI---SAFECVHDGWGVAVLV  270 (354)
Q Consensus       249 ~~~~~~---~~~~~l~~~~g~~v~~  270 (354)
                      ....-.   ...+.+.+. .+++.-
T Consensus        78 ~~~~n~~i~~~ar~~~p~-~~Iiar  101 (413)
T 3l9w_A           78 DPQTNLQLTEMVKEHFPH-LQIIAR  101 (413)
T ss_dssp             SHHHHHHHHHHHHHHCTT-CEEEEE
T ss_pred             ChHHHHHHHHHHHHhCCC-CeEEEE
Confidence            754332   233344454 455443

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=97.06  E-value=0.0026  Score=54.24  Aligned_cols=79  Identities=27%  Similarity=0.382  Sum_probs=51.7

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH-hc-----CCc-eEE--cCCCCChhHHHHHHHHcCC
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KF-----GVT-DFV--NTSEHDRPIQEVIAEMTNG  238 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~-~l-----g~~-~v~--~~~~~~~~~~~~i~~~~~~  238 (354)
                      .++++||+|+ |++|...+..+...|+ +|+++++++++.+.+. ++     +.. ..+  |..+. ..+.+.+.+....
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~v~~~~~~~~~~   83 (260)
T 2z1n_A            6 QGKLAVVTAGSSGLGFASALELARNGA-RLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREP-GDIDRLFEKARDL   83 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCH-HHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCH-HHHHHHHHHHHHh
Confidence            4678999987 9999999988888999 8999999887665432 22     311 222  33221 2233333333322


Q ss_pred             -CccEEEEcccC
Q 018529          239 -GVDRSVECTGN  249 (354)
Q Consensus       239 -~~dvv~d~~g~  249 (354)
                       ++|++++++|.
T Consensus        84 ~gid~lv~~Ag~   95 (260)
T 2z1n_A           84 GGADILVYSTGG   95 (260)
T ss_dssp             TCCSEEEECCCC
T ss_pred             cCCCEEEECCCC
Confidence             49999999873

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=97.06  E-value=0.0048  Score=53.70  Aligned_cols=81  Identities=16%  Similarity=0.213  Sum_probs=51.9

Q ss_pred             CCCCeEEEEcC-C--hhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH----hcCCceEEcCCCCC-hhHHHHHHHHcC--
Q 018529          168 ERGSSVAVFGL-G--AVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTDFVNTSEHD-RPIQEVIAEMTN--  237 (354)
Q Consensus       168 ~~~~~vlI~G~-g--~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~----~lg~~~v~~~~~~~-~~~~~~i~~~~~--  237 (354)
                      -.++++||+|+ |  ++|...++.+...|+ +|++++++++..+.++    +.+....+..+=.+ .++.+.+++...  
T Consensus        28 l~~k~vlVTGasg~~GIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  106 (296)
T 3k31_A           28 MEGKKGVIIGVANDKSLAWGIAKAVCAQGA-EVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEEW  106 (296)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEEeCCCCCCHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            35789999987 5  999998888888899 8999988876554443    33433333222222 122222222211  


Q ss_pred             CCccEEEEcccC
Q 018529          238 GGVDRSVECTGN  249 (354)
Q Consensus       238 ~~~dvv~d~~g~  249 (354)
                      +++|++++++|.
T Consensus       107 g~iD~lVnnAG~  118 (296)
T 3k31_A          107 GSLDFVVHAVAF  118 (296)
T ss_dssp             SCCSEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence            479999999874

>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}

Probab=97.05  E-value=0.0015  Score=53.01  Aligned_cols=103  Identities=20%  Similarity=0.234  Sum_probs=69.5

Q ss_pred             hcCCCCCCeEEEEcCChhHHHHHHHHHHcC-CcEEEEEcCChhhHHHHHh----cCC-ceEEcCCCCChhHHHHHHHHcC
Q 018529          164 VAKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKK----FGV-TDFVNTSEHDRPIQEVIAEMTN  237 (354)
Q Consensus       164 ~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g-~~~vi~v~~~~~~~~~~~~----lg~-~~v~~~~~~~~~~~~~i~~~~~  237 (354)
                      ...++++++||-+|+|. |..+..+++..+ ..+|++++.+++..+.+++    .|. ..+-.. ..+  +. .+.....
T Consensus        17 ~~~~~~~~~vLDlGcG~-G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~-~~d--~~-~~~~~~~   91 (197)
T 3eey_A           17 KMFVKEGDTVVDATCGN-GNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLI-KDG--HQ-NMDKYID   91 (197)
T ss_dssp             HHHCCTTCEEEESCCTT-SHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEE-CSC--GG-GGGGTCC
T ss_pred             HhcCCCCCEEEEcCCCC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEE-ECC--HH-HHhhhcc
Confidence            34678899999999876 888888999864 2399999999988887755    343 222111 111  11 1111223


Q ss_pred             CCccEEEEcccC---------------hHhHHHHHHHhhCCCceEEEEcC
Q 018529          238 GGVDRSVECTGN---------------IDNMISAFECVHDGWGVAVLVGV  272 (354)
Q Consensus       238 ~~~dvv~d~~g~---------------~~~~~~~~~~l~~~~g~~v~~g~  272 (354)
                      +.+|+|+...+-               ...+..+.+.|+++ |++++...
T Consensus        92 ~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~g-G~l~~~~~  140 (197)
T 3eey_A           92 CPVKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTG-GIITVVIY  140 (197)
T ss_dssp             SCEEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEE-EEEEEEEC
T ss_pred             CCceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCC-CEEEEEEc
Confidence            479999865432               25788899999997 99887753

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=97.03  E-value=0.0065  Score=51.70  Aligned_cols=79  Identities=22%  Similarity=0.334  Sum_probs=50.5

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhh-HHHH-Hhc----CCce-EE--cCCCCChhHHHHHHHHcC-
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR-FEEA-KKF----GVTD-FV--NTSEHDRPIQEVIAEMTN-  237 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~-~~~~-~~l----g~~~-v~--~~~~~~~~~~~~i~~~~~-  237 (354)
                      +++++||+|+ |++|...++.+...|+ +|+++++++++ .+.+ +++    +... .+  |..+. ..+.+.+.+... 
T Consensus         3 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~v~~~~~~~~~~   80 (260)
T 1x1t_A            3 KGKVAVVTGSTSGIGLGIATALAAQGA-DIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKG-EAVRGLVDNAVRQ   80 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSH-HHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcCC-EEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCH-HHHHHHHHHHHHh
Confidence            4678999987 9999999998888999 89999888776 4433 222    4332 22  22221 122222322211 


Q ss_pred             -CCccEEEEcccC
Q 018529          238 -GGVDRSVECTGN  249 (354)
Q Consensus       238 -~~~dvv~d~~g~  249 (354)
                       +++|++++++|.
T Consensus        81 ~g~iD~lv~~Ag~   93 (260)
T 1x1t_A           81 MGRIDILVNNAGI   93 (260)
T ss_dssp             HSCCSEEEECCCC
T ss_pred             cCCCCEEEECCCC
Confidence             479999999873

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=97.03  E-value=0.0052  Score=52.50  Aligned_cols=79  Identities=20%  Similarity=0.296  Sum_probs=50.8

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-Hhc-----CCc-eEE--cCCCCChhHHHHHHHHc--
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKF-----GVT-DFV--NTSEHDRPIQEVIAEMT--  236 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~~l-----g~~-~v~--~~~~~~~~~~~~i~~~~--  236 (354)
                      .++++||+|+ |.+|...++.+...|+ +|++++++.++.+.+ +++     +.. ..+  |..+. .++.+.+++..  
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~-~~v~~~~~~~~~~   83 (267)
T 2gdz_A            6 NGKVALVTGAAQGIGRAFAEALLLKGA-KVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQ-QQLRDTFRKVVDH   83 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSH-HHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCH-HHHHHHHHHHHHH
Confidence            4678999987 9999999998888999 899999988765433 222     111 122  32221 12333232221  


Q ss_pred             CCCccEEEEcccC
Q 018529          237 NGGVDRSVECTGN  249 (354)
Q Consensus       237 ~~~~dvv~d~~g~  249 (354)
                      .+++|++++++|.
T Consensus        84 ~g~id~lv~~Ag~   96 (267)
T 2gdz_A           84 FGRLDILVNNAGV   96 (267)
T ss_dssp             HSCCCEEEECCCC
T ss_pred             cCCCCEEEECCCC
Confidence            1368999999884

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=97.03  E-value=0.0081  Score=51.51  Aligned_cols=103  Identities=24%  Similarity=0.351  Sum_probs=62.3

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEc-CChhhHHHH----HhcCCceE-EcCCCCC-hhHHHHHHHHcC--C
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVD-RSSKRFEEA----KKFGVTDF-VNTSEHD-RPIQEVIAEMTN--G  238 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~-~~~~~~~~~----~~lg~~~v-~~~~~~~-~~~~~~i~~~~~--~  238 (354)
                      .++++||+|+ |++|.+.++.+...|+ +|+.++ ++.++.+.+    ++.|.... +..+-.+ .++.+.+++...  +
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  108 (271)
T 3v2g_A           30 AGKTAFVTGGSRGIGAAIAKRLALEGA-AVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALG  108 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            5789999987 9999999988888999 777764 444444332    33454322 2222222 122222332211  3


Q ss_pred             CccEEEEcccCh-------------------------HhHHHHHHHhhCCCceEEEEcCC
Q 018529          239 GVDRSVECTGNI-------------------------DNMISAFECVHDGWGVAVLVGVP  273 (354)
Q Consensus       239 ~~dvv~d~~g~~-------------------------~~~~~~~~~l~~~~g~~v~~g~~  273 (354)
                      ++|++++++|..                         ...+.+...++.. |+++.++..
T Consensus       109 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~-g~iv~isS~  167 (271)
T 3v2g_A          109 GLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDG-GRIITIGSN  167 (271)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTT-CEEEEECCG
T ss_pred             CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcC-CEEEEEeCh
Confidence            799999998741                         1233344556666 999998763

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=97.03  E-value=0.013  Score=48.84  Aligned_cols=76  Identities=13%  Similarity=0.264  Sum_probs=49.7

Q ss_pred             CeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh-cCCc-eE--EcCCCCChhHHHHHHHHcCCCccEEEE
Q 018529          171 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVT-DF--VNTSEHDRPIQEVIAEMTNGGVDRSVE  245 (354)
Q Consensus       171 ~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~-lg~~-~v--~~~~~~~~~~~~~i~~~~~~~~dvv~d  245 (354)
                      +++||+|+ |++|.+.+..+...|+ +|+.+++++++.+.+.+ ++.. ..  .|..+. ..+.+.+.+. ...+|++++
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~-~~v~~~~~~~-~~~~d~lv~   78 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGK-ATYLTGRSESKLSTVTNCLSNNVGYRARDLASH-QEVEQLFEQL-DSIPSTVVH   78 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHTCSSCCCEEECCTTCH-HHHHHHHHSC-SSCCSEEEE
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhccCeEeecCCCH-HHHHHHHHHH-hhcCCEEEE
Confidence            36899987 9999999998889999 79999999988776543 4332 12  222221 1222223332 234599999


Q ss_pred             cccC
Q 018529          246 CTGN  249 (354)
Q Consensus       246 ~~g~  249 (354)
                      ++|.
T Consensus        79 ~Ag~   82 (230)
T 3guy_A           79 SAGS   82 (230)
T ss_dssp             CCCC
T ss_pred             eCCc
Confidence            9873

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=97.02  E-value=0.0013  Score=56.13  Aligned_cols=79  Identities=19%  Similarity=0.207  Sum_probs=51.9

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhh-HHHHHhcCCceE-EcCCCCChhHHHHHHHHc--CCCccEE
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR-FEEAKKFGVTDF-VNTSEHDRPIQEVIAEMT--NGGVDRS  243 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~-~~~~~~lg~~~v-~~~~~~~~~~~~~i~~~~--~~~~dvv  243 (354)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++ .+.+++.++..+ .|..+. .++.+.+.+..  .+++|++
T Consensus        26 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~~~g~iD~l  103 (260)
T 3gem_A           26 SSAPILITGASQRVGLHCALRLLEHGH-RVIISYRTEHASVTELRQAGAVALYGDFSCE-TGIMAFIDLLKTQTSSLRAV  103 (260)
T ss_dssp             -CCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESSCCHHHHHHHHHTCEEEECCTTSH-HHHHHHHHHHHHHCSCCSEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHhcCCeEEECCCCCH-HHHHHHHHHHHHhcCCCCEE
Confidence            4678999987 9999999988888899 78888888765 344555665332 233322 22322233221  2479999


Q ss_pred             EEcccC
Q 018529          244 VECTGN  249 (354)
Q Consensus       244 ~d~~g~  249 (354)
                      ++++|.
T Consensus       104 v~nAg~  109 (260)
T 3gem_A          104 VHNASE  109 (260)
T ss_dssp             EECCCC
T ss_pred             EECCCc
Confidence            999884

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=97.02  E-value=0.0074  Score=51.32  Aligned_cols=41  Identities=22%  Similarity=0.241  Sum_probs=35.0

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA  210 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~  210 (354)
                      .++++||+|+ |.+|...+..+...|+ +|+++++++++.+.+
T Consensus         6 ~~k~vlITGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~   47 (264)
T 2pd6_A            6 RSALALVTGAGSGIGRAVSVRLAGEGA-TVAACDLDRAAAQET   47 (264)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHH
Confidence            4678999987 9999999988888999 899999988776654

>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1

Probab=97.00  E-value=0.00068  Score=59.78  Aligned_cols=104  Identities=21%  Similarity=0.226  Sum_probs=71.3

Q ss_pred             hhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCC-cEEEEEcCChhhHHHHHh----cCCceEEcCCCCChhHHHHHHHH
Q 018529          161 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEM  235 (354)
Q Consensus       161 l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~-~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~~  235 (354)
                      +.....++++++||-+|+|. |..+..+++..+. .+|++++.+++..+.+++    .|...+- ....+  ..+...  
T Consensus        67 l~~~l~~~~~~~VLDiGcG~-G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~-~~~~d--~~~~~~--  140 (317)
T 1dl5_A           67 FMEWVGLDKGMRVLEIGGGT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVI-FVCGD--GYYGVP--  140 (317)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEE-EEESC--GGGCCG--
T ss_pred             HHHhcCCCCcCEEEEecCCc-hHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeE-EEECC--hhhccc--
Confidence            34566789999999999986 8888888887652 379999999998887765    3543321 11111  111011  


Q ss_pred             cCCCccEEEEcccChHhHHHHHHHhhCCCceEEEEc
Q 018529          236 TNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVG  271 (354)
Q Consensus       236 ~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g  271 (354)
                      ..+.+|+|+....-......+.+.|+++ |++++.-
T Consensus       141 ~~~~fD~Iv~~~~~~~~~~~~~~~Lkpg-G~lvi~~  175 (317)
T 1dl5_A          141 EFSPYDVIFVTVGVDEVPETWFTQLKEG-GRVIVPI  175 (317)
T ss_dssp             GGCCEEEEEECSBBSCCCHHHHHHEEEE-EEEEEEB
T ss_pred             cCCCeEEEEEcCCHHHHHHHHHHhcCCC-cEEEEEE
Confidence            1247999998765544557888999997 9988764

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=97.00  E-value=0.0037  Score=53.15  Aligned_cols=79  Identities=27%  Similarity=0.249  Sum_probs=52.1

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCC-hhHHHHHHHHc--CCCccEEE
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHD-RPIQEVIAEMT--NGGVDRSV  244 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~-~~~~~~i~~~~--~~~~dvv~  244 (354)
                      .++++||+|+ |.+|...++.+...|+ +|+++++++++.+..++++. ..+..+-.+ .++.+.+++..  .+++|+++
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv   82 (256)
T 2d1y_A            5 AGKGVLVTGGARGIGRAIAQAFAREGA-LVALCDLRPEGKEVAEAIGG-AFFQVDLEDERERVRFVEEAAYALGRVDVLV   82 (256)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTTHHHHHHHHTC-EEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHhhC-CEEEeeCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            4688999987 9999999998888999 89999888877444455542 333222222 12323233221  14799999


Q ss_pred             EcccC
Q 018529          245 ECTGN  249 (354)
Q Consensus       245 d~~g~  249 (354)
                      +++|.
T Consensus        83 ~~Ag~   87 (256)
T 2d1y_A           83 NNAAI   87 (256)
T ss_dssp             ECCCC
T ss_pred             ECCCC
Confidence            99874

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=97.00  E-value=0.0053  Score=52.51  Aligned_cols=79  Identities=27%  Similarity=0.411  Sum_probs=52.9

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh-----cCCce---EEcCCCCC--hhHHHHHHHHcC
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-----FGVTD---FVNTSEHD--RPIQEVIAEMTN  237 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~-----lg~~~---v~~~~~~~--~~~~~~i~~~~~  237 (354)
                      .++++||+|+ |++|.+.++.+...|+ +|+.++++.++.+.+.+     .+...   ..|..+.+  +.+.+.+.+.. 
T Consensus        19 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-   96 (266)
T 4egf_A           19 DGKRALITGATKGIGADIARAFAAAGA-RLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAF-   96 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc-
Confidence            4688999987 9999999998889999 89999999877654322     34322   12444333  12233333322 


Q ss_pred             CCccEEEEcccC
Q 018529          238 GGVDRSVECTGN  249 (354)
Q Consensus       238 ~~~dvv~d~~g~  249 (354)
                      +++|++++++|.
T Consensus        97 g~id~lv~nAg~  108 (266)
T 4egf_A           97 GGLDVLVNNAGI  108 (266)
T ss_dssp             TSCSEEEEECCC
T ss_pred             CCCCEEEECCCc
Confidence            379999998874

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=97.00  E-value=0.005  Score=52.98  Aligned_cols=78  Identities=27%  Similarity=0.196  Sum_probs=52.9

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH----HhcCCce-E--EcCCCCC--hhHHHHHHHHcCC
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-F--VNTSEHD--RPIQEVIAEMTNG  238 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~----~~lg~~~-v--~~~~~~~--~~~~~~i~~~~~~  238 (354)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+    ++.+... .  .|..+.+  ..+.+.+.+.  +
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~--g  108 (275)
T 4imr_A           32 RGRTALVTGSSRGIGAAIAEGLAGAGA-HVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAI--A  108 (275)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHH--S
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHh--C
Confidence            5788999987 9999999998888999 899998887665443    2234322 1  2333332  2233344444  5


Q ss_pred             CccEEEEcccC
Q 018529          239 GVDRSVECTGN  249 (354)
Q Consensus       239 ~~dvv~d~~g~  249 (354)
                      ++|++++++|.
T Consensus       109 ~iD~lvnnAg~  119 (275)
T 4imr_A          109 PVDILVINASA  119 (275)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999884

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=97.00  E-value=0.0043  Score=52.44  Aligned_cols=79  Identities=24%  Similarity=0.310  Sum_probs=53.6

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-HhcCCceEE---cCCCCC--hhHHHHHHHHcCCCcc
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTDFV---NTSEHD--RPIQEVIAEMTNGGVD  241 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~~lg~~~v~---~~~~~~--~~~~~~i~~~~~~~~d  241 (354)
                      .++++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+ ++++.....   |..+.+  +.+.+.+.+.. +++|
T Consensus         5 ~gk~vlVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~id   82 (247)
T 3rwb_A            5 AGKTALVTGAAQGIGKAIAARLAADGA-TVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALT-GGID   82 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHH-SCCS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHC-CCCC
Confidence            5789999987 9999999999999999 899999998876654 445543322   222211  11222232222 3799


Q ss_pred             EEEEcccC
Q 018529          242 RSVECTGN  249 (354)
Q Consensus       242 vv~d~~g~  249 (354)
                      ++++++|.
T Consensus        83 ~lv~nAg~   90 (247)
T 3rwb_A           83 ILVNNASI   90 (247)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999884

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=96.99  E-value=0.005  Score=53.14  Aligned_cols=79  Identities=18%  Similarity=0.204  Sum_probs=50.6

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh-c---CC-c-eEE--cCCCCC--hhHHHHHHHHcC
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-F---GV-T-DFV--NTSEHD--RPIQEVIAEMTN  237 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~-l---g~-~-~v~--~~~~~~--~~~~~~i~~~~~  237 (354)
                      .|+++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.+ +   +. . ..+  |..+.+  +.+.+.+.+.. 
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-  109 (281)
T 4dry_A           32 EGRIALVTGGGTGVGRGIAQALSAEGY-SVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEF-  109 (281)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHc-
Confidence            5789999987 9999999988888999 89999999887655432 2   21 1 222  333321  11222332222 


Q ss_pred             CCccEEEEcccC
Q 018529          238 GGVDRSVECTGN  249 (354)
Q Consensus       238 ~~~dvv~d~~g~  249 (354)
                      +++|++++++|.
T Consensus       110 g~iD~lvnnAG~  121 (281)
T 4dry_A          110 ARLDLLVNNAGS  121 (281)
T ss_dssp             SCCSEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999874

>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*

Probab=96.99  E-value=0.00094  Score=56.16  Aligned_cols=98  Identities=15%  Similarity=0.169  Sum_probs=67.9

Q ss_pred             CCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcC----CceEEcCCCCChhHHHHHHHHcCCCccE
Q 018529          167 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG----VTDFVNTSEHDRPIQEVIAEMTNGGVDR  242 (354)
Q Consensus       167 ~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg----~~~v~~~~~~~~~~~~~i~~~~~~~~dv  242 (354)
                      ..+|.+||-+|+| .|..+..+++..+. +|++++.+++-.+.+++..    ....+.  ..+  +.+....+..+.||.
T Consensus        58 ~~~G~rVLdiG~G-~G~~~~~~~~~~~~-~v~~id~~~~~~~~a~~~~~~~~~~~~~~--~~~--a~~~~~~~~~~~FD~  131 (236)
T 3orh_A           58 SSKGGRVLEVGFG-MAIAASKVQEAPID-EHWIIECNDGVFQRLRDWAPRQTHKVIPL--KGL--WEDVAPTLPDGHFDG  131 (236)
T ss_dssp             TTTCEEEEEECCT-TSHHHHHHTTSCEE-EEEEEECCHHHHHHHHHHGGGCSSEEEEE--ESC--HHHHGGGSCTTCEEE
T ss_pred             ccCCCeEEEECCC-ccHHHHHHHHhCCc-EEEEEeCCHHHHHHHHHHHhhCCCceEEE--eeh--HHhhcccccccCCce
Confidence            4789999999998 48888888887665 8999999999988887642    221121  111  444444444457998


Q ss_pred             E-EEcccC----------hHhHHHHHHHhhCCCceEEEEc
Q 018529          243 S-VECTGN----------IDNMISAFECVHDGWGVAVLVG  271 (354)
Q Consensus       243 v-~d~~g~----------~~~~~~~~~~l~~~~g~~v~~g  271 (354)
                      | +|+...          ...++.+.+.|+|+ |+++++.
T Consensus       132 i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPG-G~l~f~~  170 (236)
T 3orh_A          132 ILYDTYPLSEETWHTHQFNFIKNHAFRLLKPG-GVLTYCN  170 (236)
T ss_dssp             EEECCCCCBGGGTTTHHHHHHHHTHHHHEEEE-EEEEECC
T ss_pred             EEEeeeecccchhhhcchhhhhhhhhheeCCC-CEEEEEe
Confidence            8 454432          13567788999997 9998874

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=96.99  E-value=0.0033  Score=53.62  Aligned_cols=79  Identities=19%  Similarity=0.206  Sum_probs=52.0

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH-hcC--CceE-EcCCCCChhHHHHHHHHc--CCCcc
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFG--VTDF-VNTSEHDRPIQEVIAEMT--NGGVD  241 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~-~lg--~~~v-~~~~~~~~~~~~~i~~~~--~~~~d  241 (354)
                      .++++||+|+ |.+|...+..+...|+ +|+++++++++.+.+. ++.  +..+ .|..+. ..+.+.+.+..  .+++|
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~-~~v~~~~~~~~~~~g~iD   88 (263)
T 3ak4_A           11 SGRKAIVTGGSKGIGAAIARALDKAGA-TVAIADLDVMAAQAVVAGLENGGFAVEVDVTKR-ASVDAAMQKAIDALGGFD   88 (263)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTCTTCCEEEECCTTCH-HHHHHHHHHHHHHHTCCC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCH-HHHHHHHHHHHHHcCCCC
Confidence            4789999987 9999999998888999 8999999987766543 332  2211 233221 12222222221  13799


Q ss_pred             EEEEcccC
Q 018529          242 RSVECTGN  249 (354)
Q Consensus       242 vv~d~~g~  249 (354)
                      ++++++|.
T Consensus        89 ~lv~~Ag~   96 (263)
T 3ak4_A           89 LLCANAGV   96 (263)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCc
Confidence            99999873

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=96.99  E-value=0.0035  Score=54.05  Aligned_cols=79  Identities=25%  Similarity=0.368  Sum_probs=52.3

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-HhcCCc-eEE--cCCCCChhHHHHHHHHc--CCCcc
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVT-DFV--NTSEHDRPIQEVIAEMT--NGGVD  241 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~~lg~~-~v~--~~~~~~~~~~~~i~~~~--~~~~d  241 (354)
                      .++++||+|+ |.+|...++.+...|+ +|++++++.++.+.+ .+++.. ..+  |..+. ..+.+.+.+..  .+++|
T Consensus         4 ~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~~~~~~~~~~~~~g~id   81 (281)
T 3m1a_A            4 SAKVWLVTGASSGFGRAIAEAAVAAGD-TVIGTARRTEALDDLVAAYPDRAEAISLDVTDG-ERIDVVAADVLARYGRVD   81 (281)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHCTTTEEEEECCTTCH-HHHHHHHHHHHHHHSCCS
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCCceEEEeeCCCH-HHHHHHHHHHHHhCCCCC
Confidence            4678999987 9999999998889999 899999988876654 334432 222  22221 12222222221  13799


Q ss_pred             EEEEcccC
Q 018529          242 RSVECTGN  249 (354)
Q Consensus       242 vv~d~~g~  249 (354)
                      ++++++|.
T Consensus        82 ~lv~~Ag~   89 (281)
T 3m1a_A           82 VLVNNAGR   89 (281)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCc
Confidence            99999884

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=96.99  E-value=0.0062  Score=51.66  Aligned_cols=80  Identities=28%  Similarity=0.345  Sum_probs=49.3

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhh--HHHHHhcCCceE-EcCCCCC-hhHHHHHHHHcC--CCcc
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR--FEEAKKFGVTDF-VNTSEHD-RPIQEVIAEMTN--GGVD  241 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~--~~~~~~lg~~~v-~~~~~~~-~~~~~~i~~~~~--~~~d  241 (354)
                      .++++||+|+ |.+|...+..+...|+ +|++++++++.  .+.+++.+.... +..+-.+ .++.+.+.+...  +++|
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   81 (255)
T 2q2v_A            3 KGKTALVTGSTSGIGLGIAQVLARAGA-NIVLNGFGDPAPALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFGGVD   81 (255)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEECSSCCHHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHSSCS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            4678999987 9999999998888999 88888887651  222333354322 2111112 122222322211  3799


Q ss_pred             EEEEcccC
Q 018529          242 RSVECTGN  249 (354)
Q Consensus       242 vv~d~~g~  249 (354)
                      ++++++|.
T Consensus        82 ~lv~~Ag~   89 (255)
T 2q2v_A           82 ILVNNAGI   89 (255)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999873

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=96.98  E-value=0.0059  Score=51.96  Aligned_cols=79  Identities=29%  Similarity=0.311  Sum_probs=50.3

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEE-cCChhhHHHH----HhcCCceE-E--cCCCCChhHHHHHHHHc--C
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGV-DRSSKRFEEA----KKFGVTDF-V--NTSEHDRPIQEVIAEMT--N  237 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v-~~~~~~~~~~----~~lg~~~v-~--~~~~~~~~~~~~i~~~~--~  237 (354)
                      +++++||+|+ |++|.+.++.+...|+ +|+.+ .+++++.+.+    ++.+.... +  |..+. .++.+.+++..  .
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~-~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~~~   80 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGY-NIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQP-AKIKEMFQQIDETF   80 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCH-HHHHHHHHHHHHHH
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCH-HHHHHHHHHHHHHc
Confidence            5788999987 9999999999889999 66665 7887765543    23344322 2  22221 12222222221  1


Q ss_pred             CCccEEEEcccC
Q 018529          238 GGVDRSVECTGN  249 (354)
Q Consensus       238 ~~~dvv~d~~g~  249 (354)
                      +++|++++++|.
T Consensus        81 g~id~lv~nAg~   92 (258)
T 3oid_A           81 GRLDVFVNNAAS   92 (258)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            378999999873

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=96.98  E-value=0.0032  Score=53.35  Aligned_cols=81  Identities=16%  Similarity=0.191  Sum_probs=52.4

Q ss_pred             CCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh-c----C--Cce-EEcCCCCCh-hHHHHHHHHc-
Q 018529          168 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-F----G--VTD-FVNTSEHDR-PIQEVIAEMT-  236 (354)
Q Consensus       168 ~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~-l----g--~~~-v~~~~~~~~-~~~~~i~~~~-  236 (354)
                      -.++++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+.+ +    +  ... ..|....+. ++.+.+.+.. 
T Consensus        10 l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (252)
T 3f1l_A           10 LNDRIILVTGASDGIGREAAMTYARYGA-TVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAV   88 (252)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHH
Confidence            45789999987 9999999888888999 89999999887655422 1    2  211 223311221 2222222221 


Q ss_pred             -CCCccEEEEcccC
Q 018529          237 -NGGVDRSVECTGN  249 (354)
Q Consensus       237 -~~~~dvv~d~~g~  249 (354)
                       .+++|++++++|.
T Consensus        89 ~~g~id~lv~nAg~  102 (252)
T 3f1l_A           89 NYPRLDGVLHNAGL  102 (252)
T ss_dssp             HCSCCSEEEECCCC
T ss_pred             hCCCCCEEEECCcc
Confidence             2479999999874

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=96.98  E-value=0.0031  Score=53.47  Aligned_cols=79  Identities=18%  Similarity=0.281  Sum_probs=51.9

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----c--C-C-ceEE--cCCCCChhHHHHHHHHcC
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----F--G-V-TDFV--NTSEHDRPIQEVIAEMTN  237 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----l--g-~-~~v~--~~~~~~~~~~~~i~~~~~  237 (354)
                      .++++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+.+    .  + . ...+  |..+. .++.+.+.+...
T Consensus         6 ~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~   83 (250)
T 3nyw_A            6 QKGLAIITGASQGIGAVIAAGLATDGY-RVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDC-TKADTEIKDIHQ   83 (250)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHHTC-EEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCH-HHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCH-HHHHHHHHHHHH
Confidence            4678999987 9999998888888899 89999999887665432    1  2 1 1222  33322 122222222211


Q ss_pred             --CCccEEEEcccC
Q 018529          238 --GGVDRSVECTGN  249 (354)
Q Consensus       238 --~~~dvv~d~~g~  249 (354)
                        +++|++++++|.
T Consensus        84 ~~g~iD~lvnnAg~   97 (250)
T 3nyw_A           84 KYGAVDILVNAAAM   97 (250)
T ss_dssp             HHCCEEEEEECCCC
T ss_pred             hcCCCCEEEECCCc
Confidence              479999999885

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=96.97  E-value=0.0037  Score=53.96  Aligned_cols=75  Identities=25%  Similarity=0.283  Sum_probs=52.3

Q ss_pred             CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-HhcCC----ceEEcCCCCChhHHHHHHHHcCCCccE
Q 018529          168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGV----TDFVNTSEHDRPIQEVIAEMTNGGVDR  242 (354)
Q Consensus       168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~~lg~----~~v~~~~~~~~~~~~~i~~~~~~~~dv  242 (354)
                      -.+++++|+|+|++|.+++..+...|+++|++++|+.++.+.+ ++++.    ..+......+  +.+.+.     .+|+
T Consensus       125 l~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~--l~~~l~-----~~Di  197 (283)
T 3jyo_A          125 AKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARG--IEDVIA-----AADG  197 (283)
T ss_dssp             CCCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTT--HHHHHH-----HSSE
T ss_pred             cCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHH--HHHHHh-----cCCE
Confidence            4678999999999999999999899997899999999887654 33321    1121111111  444333     3799


Q ss_pred             EEEcccC
Q 018529          243 SVECTGN  249 (354)
Q Consensus       243 v~d~~g~  249 (354)
                      |+++++.
T Consensus       198 VInaTp~  204 (283)
T 3jyo_A          198 VVNATPM  204 (283)
T ss_dssp             EEECSST
T ss_pred             EEECCCC
Confidence            9999864

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=96.97  E-value=0.0042  Score=52.67  Aligned_cols=78  Identities=17%  Similarity=0.255  Sum_probs=53.2

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH----HhcCCceE---EcCCCCC--hhHHHHHHHHcCC
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTDF---VNTSEHD--RPIQEVIAEMTNG  238 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~----~~lg~~~v---~~~~~~~--~~~~~~i~~~~~~  238 (354)
                      +|+++||+|+ +++|.+.++.....|+ +|+.+++++++.+.+    ++.|....   .|..+.+  +.+.+++.+.. |
T Consensus         6 ~gKvalVTGas~GIG~aiA~~la~~Ga-~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~-G   83 (254)
T 4fn4_A            6 KNKVVIVTGAGSGIGRAIAKKFALNDS-IVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETY-S   83 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH-S
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc-C
Confidence            4789999987 9999998888888999 899999999876644    34565432   2333221  12222222222 4


Q ss_pred             CccEEEEccc
Q 018529          239 GVDRSVECTG  248 (354)
Q Consensus       239 ~~dvv~d~~g  248 (354)
                      +.|++++++|
T Consensus        84 ~iDiLVNNAG   93 (254)
T 4fn4_A           84 RIDVLCNNAG   93 (254)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCc
Confidence            7999999987

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=96.96  E-value=0.0042  Score=52.69  Aligned_cols=76  Identities=22%  Similarity=0.106  Sum_probs=50.3

Q ss_pred             CeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH---hcCCceEEcCCCCC-hhHHHHHHHHcCCCccEEEE
Q 018529          171 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK---KFGVTDFVNTSEHD-RPIQEVIAEMTNGGVDRSVE  245 (354)
Q Consensus       171 ~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~---~lg~~~v~~~~~~~-~~~~~~i~~~~~~~~dvv~d  245 (354)
                      +++||+|+ |++|...++.+...|+ +|+++++++++.+.+.   +.|...... +..+ ..+.+.+.+.. +++|++++
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~-d~~~v~~~~~~~~~~~-g~iD~lv~   78 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGH-TVACHDESFKQKDELEAFAETYPQLKPM-SEQEPAELIEAVTSAY-GQVDVLVS   78 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTC-EEEECCGGGGSHHHHHHHHHHCTTSEEC-CCCSHHHHHHHHHHHH-SCCCEEEE
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCcEEEE-CHHHHHHHHHHHHHHh-CCCCEEEE
Confidence            46899987 9999999999888999 8999988887665543   234432222 2222 22333333322 47999999


Q ss_pred             cccC
Q 018529          246 CTGN  249 (354)
Q Consensus       246 ~~g~  249 (354)
                      ++|.
T Consensus        79 nAg~   82 (254)
T 1zmt_A           79 NDIF   82 (254)
T ss_dssp             ECCC
T ss_pred             CCCc
Confidence            9874

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=96.96  E-value=0.006  Score=51.75  Aligned_cols=78  Identities=19%  Similarity=0.184  Sum_probs=50.6

Q ss_pred             CCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH----hcCCce-EE--cCCCCChhHHHHHHHHc--CCC
Q 018529          170 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD-FV--NTSEHDRPIQEVIAEMT--NGG  239 (354)
Q Consensus       170 ~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~----~lg~~~-v~--~~~~~~~~~~~~i~~~~--~~~  239 (354)
                      ++++||+|+ |++|...+..+...|+ +|+++++++++.+.+.    +.+... .+  |..+. .++.+.+++..  .++
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~v~~~~~~~~~~~g~   79 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGF-AVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDR-DQVFAAVEQARKTLGG   79 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSH-HHHHHHHHHHHHHTTC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCH-HHHHHHHHHHHHHhCC
Confidence            468999987 9999999998888999 8999999887655432    234322 22  33222 12222232221  247


Q ss_pred             ccEEEEcccC
Q 018529          240 VDRSVECTGN  249 (354)
Q Consensus       240 ~dvv~d~~g~  249 (354)
                      +|++++++|.
T Consensus        80 id~lv~nAg~   89 (256)
T 1geg_A           80 FDVIVNNAGV   89 (256)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999873

>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}

Probab=96.96  E-value=0.0049  Score=53.90  Aligned_cols=90  Identities=16%  Similarity=0.230  Sum_probs=67.7

Q ss_pred             CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcc
Q 018529          168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  247 (354)
Q Consensus       168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~  247 (354)
                      -.|.+|.|+|.|.+|...++.++.+|. +|++.+++.++ +.+.++|+..+      +  +.+.++     ..|+|+.++
T Consensus       140 l~g~~vgIiG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~-~~~~~~g~~~~------~--l~ell~-----~aDvV~l~~  204 (307)
T 1wwk_A          140 LEGKTIGIIGFGRIGYQVAKIANALGM-NILLYDPYPNE-ERAKEVNGKFV------D--LETLLK-----ESDVVTIHV  204 (307)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCH-HHHHHTTCEEC------C--HHHHHH-----HCSEEEECC
T ss_pred             cCCceEEEEccCHHHHHHHHHHHHCCC-EEEEECCCCCh-hhHhhcCcccc------C--HHHHHh-----hCCEEEEec
Confidence            357899999999999999999999999 99999998877 56677887421      1  434333     279999988


Q ss_pred             cChH----hH-HHHHHHhhCCCceEEEEcCC
Q 018529          248 GNID----NM-ISAFECVHDGWGVAVLVGVP  273 (354)
Q Consensus       248 g~~~----~~-~~~~~~l~~~~g~~v~~g~~  273 (354)
                      +..+    .+ ...+..++++ +.++.++..
T Consensus       205 p~~~~t~~li~~~~l~~mk~g-a~lin~arg  234 (307)
T 1wwk_A          205 PLVESTYHLINEERLKLMKKT-AILINTSRG  234 (307)
T ss_dssp             CCSTTTTTCBCHHHHHHSCTT-CEEEECSCG
T ss_pred             CCChHHhhhcCHHHHhcCCCC-eEEEECCCC
Confidence            7422    22 4567889997 888888763

>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}

Probab=96.96  E-value=0.0011  Score=55.68  Aligned_cols=103  Identities=18%  Similarity=0.151  Sum_probs=69.8

Q ss_pred             CCCCCCeEEEEcCChhHHHHHHHHHHcC-CcEEEEEcCChhhHHHHHh----cCCceEEcCCCCChhHHHHHHHHcC---
Q 018529          166 KPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTN---  237 (354)
Q Consensus       166 ~~~~~~~vlI~G~g~~G~~a~~~a~~~g-~~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~~~~---  237 (354)
                      ...++++||-+|+| .|..++.+++.++ ..+|++++.+++..+.+++    .|...-+.....+  ..+.+..+..   
T Consensus        69 ~~~~~~~vLdiG~G-~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d--~~~~l~~l~~~~~  145 (232)
T 3cbg_A           69 SLTGAKQVLEIGVF-RGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGP--ALATLEQLTQGKP  145 (232)
T ss_dssp             HHHTCCEEEEECCT-TSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESC--HHHHHHHHHTSSS
T ss_pred             HhcCCCEEEEecCC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcC--HHHHHHHHHhcCC
Confidence            34567899999998 7899999999874 2399999999998887765    3543211111222  4444544432   


Q ss_pred             -CCccEEEEcccC---hHhHHHHHHHhhCCCceEEEEcC
Q 018529          238 -GGVDRSVECTGN---IDNMISAFECVHDGWGVAVLVGV  272 (354)
Q Consensus       238 -~~~dvv~d~~g~---~~~~~~~~~~l~~~~g~~v~~g~  272 (354)
                       +.||+||.....   ...++.+.+.|+++ |.+++-..
T Consensus       146 ~~~fD~V~~d~~~~~~~~~l~~~~~~Lkpg-G~lv~~~~  183 (232)
T 3cbg_A          146 LPEFDLIFIDADKRNYPRYYEIGLNLLRRG-GLMVIDNV  183 (232)
T ss_dssp             CCCEEEEEECSCGGGHHHHHHHHHHTEEEE-EEEEEECT
T ss_pred             CCCcCEEEECCCHHHHHHHHHHHHHHcCCC-eEEEEeCC
Confidence             479999854332   34688889999997 98887543

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=96.95  E-value=0.0013  Score=56.42  Aligned_cols=79  Identities=18%  Similarity=0.207  Sum_probs=51.1

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCce-EEcCCCCChhHHHHHHHHcC--CCccEEE
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD-FVNTSEHDRPIQEVIAEMTN--GGVDRSV  244 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~-v~~~~~~~~~~~~~i~~~~~--~~~dvv~  244 (354)
                      .++++||+|+ |++|...+..+...|+ +|++++++.++.+.+....... ..|..+. .++.+.+.+...  +++|+++
T Consensus        15 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~Dv~d~-~~v~~~~~~~~~~~g~iD~lv   92 (266)
T 3p19_A           15 MKKLVVITGASSGIGEAIARRFSEEGH-PLLLLARRVERLKALNLPNTLCAQVDVTDK-YTFDTAITRAEKIYGPADAIV   92 (266)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTC-CEEEEESCHHHHHTTCCTTEEEEECCTTCH-HHHHHHHHHHHHHHCSEEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHhhcCCceEEEecCCCH-HHHHHHHHHHHHHCCCCCEEE
Confidence            4688999987 9999999998888999 8999989887765443222211 1233222 122222322211  4799999


Q ss_pred             EcccC
Q 018529          245 ECTGN  249 (354)
Q Consensus       245 d~~g~  249 (354)
                      +++|.
T Consensus        93 nnAg~   97 (266)
T 3p19_A           93 NNAGM   97 (266)
T ss_dssp             ECCCC
T ss_pred             ECCCc
Confidence            99884

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=96.95  E-value=0.0032  Score=52.85  Aligned_cols=75  Identities=19%  Similarity=0.266  Sum_probs=50.8

Q ss_pred             CCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceE-EcCCCCChhHHHHHHHHcC--CCccEEEE
Q 018529          170 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHDRPIQEVIAEMTN--GGVDRSVE  245 (354)
Q Consensus       170 ~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v-~~~~~~~~~~~~~i~~~~~--~~~dvv~d  245 (354)
                      ++++||+|+ |.+|.+.++.+...|+ +|+++++++++  ..++++...+ .|..+.  ++.+.+.+...  +++|++++
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~-~V~~~~r~~~~--~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~g~id~lv~   76 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGY-RVAIASRNPEE--AAQSLGAVPLPTDLEKD--DPKGLVKRALEALGGLHVLVH   76 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHH--HHHHHTCEEEECCTTTS--CHHHHHHHHHHHHTSCCEEEE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHH--HHHhhCcEEEecCCchH--HHHHHHHHHHHHcCCCCEEEE
Confidence            568999987 9999999998888999 89999888776  3344554322 344432  23333332211  47999999


Q ss_pred             cccC
Q 018529          246 CTGN  249 (354)
Q Consensus       246 ~~g~  249 (354)
                      ++|.
T Consensus        77 ~Ag~   80 (239)
T 2ekp_A           77 AAAV   80 (239)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            9874

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=96.95  E-value=0.0087  Score=50.66  Aligned_cols=81  Identities=16%  Similarity=0.242  Sum_probs=49.8

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCCh--hhHHHHHhc--CCc-eE--EcCCCCChhHHHHHHHHcC--C
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS--KRFEEAKKF--GVT-DF--VNTSEHDRPIQEVIAEMTN--G  238 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~--~~~~~~~~l--g~~-~v--~~~~~~~~~~~~~i~~~~~--~  238 (354)
                      .++++||+|+ |++|...++.+...|+++|+++++++  +..+.+.+.  +.. ..  .|..+...++.+.+++...  +
T Consensus         4 ~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   83 (254)
T 1sby_A            4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLK   83 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHhcC
Confidence            4678999987 99999999988889985488887775  333434333  222 12  2333320223333332211  3


Q ss_pred             CccEEEEcccC
Q 018529          239 GVDRSVECTGN  249 (354)
Q Consensus       239 ~~dvv~d~~g~  249 (354)
                      ++|++++++|.
T Consensus        84 ~id~lv~~Ag~   94 (254)
T 1sby_A           84 TVDILINGAGI   94 (254)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCcc
Confidence            79999999874

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=96.95  E-value=0.003  Score=54.82  Aligned_cols=78  Identities=18%  Similarity=0.233  Sum_probs=53.8

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH-hcCCce-EEcCCCCC-hhHHHHHHHHcCCCccEEE
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTD-FVNTSEHD-RPIQEVIAEMTNGGVDRSV  244 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~-~lg~~~-v~~~~~~~-~~~~~~i~~~~~~~~dvv~  244 (354)
                      +|+++||+|+ |++|.+.+..+...|+ +|+++++++++.+.+. +++... .+..+-.+ ..+.+.+++.  +++|+++
T Consensus        15 ~gk~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~--~~iD~lv   91 (291)
T 3rd5_A           15 AQRTVVITGANSGLGAVTARELARRGA-TVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGV--SGADVLI   91 (291)
T ss_dssp             TTCEEEEECCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTC--CCEEEEE
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhc--CCCCEEE
Confidence            5789999987 9999999998888999 8999999998877654 344322 22222122 2233333333  4799999


Q ss_pred             EcccC
Q 018529          245 ECTGN  249 (354)
Q Consensus       245 d~~g~  249 (354)
                      +++|.
T Consensus        92 ~nAg~   96 (291)
T 3rd5_A           92 NNAGI   96 (291)
T ss_dssp             ECCCC
T ss_pred             ECCcC
Confidence            99884

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=96.94  E-value=0.0065  Score=52.04  Aligned_cols=104  Identities=22%  Similarity=0.288  Sum_probs=63.7

Q ss_pred             CCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcC-ChhhHHH----HHhcCCceE-E--cCCCCChhHHHHHHHHcC-
Q 018529          168 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR-SSKRFEE----AKKFGVTDF-V--NTSEHDRPIQEVIAEMTN-  237 (354)
Q Consensus       168 ~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~-~~~~~~~----~~~lg~~~v-~--~~~~~~~~~~~~i~~~~~-  237 (354)
                      -.++++||+|+ |++|.+.++.+...|+ +|+++++ +.++.+.    +++.|.... +  |..+. .++.+.+++... 
T Consensus        16 l~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~~   93 (270)
T 3is3_A           16 LDGKVALVTGSGRGIGAAVAVHLGRLGA-KVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQV-PEIVKLFDQAVAH   93 (270)
T ss_dssp             CTTCEEEESCTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSH-HHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCH-HHHHHHHHHHHHH
Confidence            35789999987 9999999998889999 7777544 4444333    233454322 2  22221 123222332211 


Q ss_pred             -CCccEEEEcccCh-------------------------HhHHHHHHHhhCCCceEEEEcCCC
Q 018529          238 -GGVDRSVECTGNI-------------------------DNMISAFECVHDGWGVAVLVGVPS  274 (354)
Q Consensus       238 -~~~dvv~d~~g~~-------------------------~~~~~~~~~l~~~~g~~v~~g~~~  274 (354)
                       +++|++++++|..                         ...+.++..+..+ |++++++...
T Consensus        94 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-g~iv~isS~~  155 (270)
T 3is3_A           94 FGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEG-GRIVLTSSNT  155 (270)
T ss_dssp             HSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTT-CEEEEECCTT
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcC-CeEEEEeCch
Confidence             3799999998741                         1233455566676 9999998754

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=96.94  E-value=0.0031  Score=54.31  Aligned_cols=79  Identities=22%  Similarity=0.312  Sum_probs=51.9

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH----hcCCc-eEE--cCCCCChhHHHHHHHHcC--C
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVT-DFV--NTSEHDRPIQEVIAEMTN--G  238 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~----~lg~~-~v~--~~~~~~~~~~~~i~~~~~--~  238 (354)
                      .++++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+.    +.+.. ..+  |..+. .++.+.+++...  +
T Consensus        31 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~-~~v~~~~~~~~~~~g  108 (276)
T 3r1i_A           31 SGKRALITGASTGIGKKVALAYAEAGA-QVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQP-DQVRGMLDQMTGELG  108 (276)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCH-HHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCH-HHHHHHHHHHHHHcC
Confidence            4689999987 9999999888888999 8999999887765442    23432 222  33222 122222322211  3


Q ss_pred             CccEEEEcccC
Q 018529          239 GVDRSVECTGN  249 (354)
Q Consensus       239 ~~dvv~d~~g~  249 (354)
                      ++|++++++|.
T Consensus       109 ~iD~lvnnAg~  119 (276)
T 3r1i_A          109 GIDIAVCNAGI  119 (276)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999874

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=96.94  E-value=0.005  Score=52.18  Aligned_cols=78  Identities=15%  Similarity=0.202  Sum_probs=53.2

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH----hcCCce-EE--cCCCCC--hhHHHHHHHHcCC
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD-FV--NTSEHD--RPIQEVIAEMTNG  238 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~----~lg~~~-v~--~~~~~~--~~~~~~i~~~~~~  238 (354)
                      .++++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+.    +.|... .+  |..+.+  ..+.+.+.+.  +
T Consensus         6 ~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~--g   82 (252)
T 3h7a_A            6 RNATVAVIGAGDYIGAEIAKKFAAEGF-TVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAH--A   82 (252)
T ss_dssp             CSCEEEEECCSSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH--S
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhh--C
Confidence            4688999987 9999999998888999 8999999887765442    234422 22  332221  1233334333  5


Q ss_pred             CccEEEEcccC
Q 018529          239 GVDRSVECTGN  249 (354)
Q Consensus       239 ~~dvv~d~~g~  249 (354)
                      ++|++++++|.
T Consensus        83 ~id~lv~nAg~   93 (252)
T 3h7a_A           83 PLEVTIFNVGA   93 (252)
T ss_dssp             CEEEEEECCCC
T ss_pred             CceEEEECCCc
Confidence            79999999884

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=96.93  E-value=0.0034  Score=53.70  Aligned_cols=79  Identities=20%  Similarity=0.238  Sum_probs=50.0

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHH-cCCcEEEEEcCChhhHHHH----HhcCCc-eEE--cCCCCChhHHHHHHHHcC--
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARI-AGASRIIGVDRSSKRFEEA----KKFGVT-DFV--NTSEHDRPIQEVIAEMTN--  237 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~-~g~~~vi~v~~~~~~~~~~----~~lg~~-~v~--~~~~~~~~~~~~i~~~~~--  237 (354)
                      +++++||+|+ |.+|...+..+.. .|+ +|++++++.++.+.+    ++.+.. .++  |..+. ..+.+.+.++..  
T Consensus         3 ~~k~vlITGasggIG~~~a~~L~~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~   80 (276)
T 1wma_A            3 GIHVALVTGGNKGIGLAIVRDLCRLFSG-DVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDL-QSIRALRDFLRKEY   80 (276)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSS-EEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCH-HHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHhcCC-eEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCH-HHHHHHHHHHHHhc
Confidence            4678999987 9999998887777 899 899998987765433    222432 222  32221 123222322211  


Q ss_pred             CCccEEEEcccC
Q 018529          238 GGVDRSVECTGN  249 (354)
Q Consensus       238 ~~~dvv~d~~g~  249 (354)
                      +++|++|+++|.
T Consensus        81 g~id~li~~Ag~   92 (276)
T 1wma_A           81 GGLDVLVNNAGI   92 (276)
T ss_dssp             SSEEEEEECCCC
T ss_pred             CCCCEEEECCcc
Confidence            379999999874

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=96.93  E-value=0.0056  Score=51.61  Aligned_cols=79  Identities=23%  Similarity=0.333  Sum_probs=50.3

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcC-ChhhHHHH----HhcCCce-EE--cCCCCChhHHHHHHHHcC--
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR-SSKRFEEA----KKFGVTD-FV--NTSEHDRPIQEVIAEMTN--  237 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~-~~~~~~~~----~~lg~~~-v~--~~~~~~~~~~~~i~~~~~--  237 (354)
                      .++++||+|+ |++|...++.+...|+ +|+++++ ++++.+.+    ++.+... .+  |..+. .++.+.+++...  
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~   80 (246)
T 2uvd_A            3 KGKVALVTGASRGIGRAIAIDLAKQGA-NVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANA-EDVTNMVKQTVDVF   80 (246)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCH-HHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCH-HHHHHHHHHHHHHc
Confidence            4678999987 9999999998888999 8888877 76665433    2234332 22  33222 122232322211  


Q ss_pred             CCccEEEEcccC
Q 018529          238 GGVDRSVECTGN  249 (354)
Q Consensus       238 ~~~dvv~d~~g~  249 (354)
                      +++|++++++|.
T Consensus        81 g~id~lv~nAg~   92 (246)
T 2uvd_A           81 GQVDILVNNAGV   92 (246)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999874

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.93  E-value=0.0034  Score=54.01  Aligned_cols=79  Identities=22%  Similarity=0.322  Sum_probs=50.4

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH-hc---C---Cc-eEE--cCCCCChhHHHHHHHHcC
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KF---G---VT-DFV--NTSEHDRPIQEVIAEMTN  237 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~-~l---g---~~-~v~--~~~~~~~~~~~~i~~~~~  237 (354)
                      .++++||+|+ |++|...+..+...|+ +|+++++++++.+.+. ++   .   .. ..+  |..+. .++.+.+++...
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~   82 (278)
T 1spx_A            5 AEKVAIITGSSNGIGRATAVLFAREGA-KVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTD-AGQDEILSTTLG   82 (278)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSH-HHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCH-HHHHHHHHHHHH
Confidence            4678999987 9999999988888999 8999999987765442 22   2   11 122  33221 122222222211


Q ss_pred             --CCccEEEEcccC
Q 018529          238 --GGVDRSVECTGN  249 (354)
Q Consensus       238 --~~~dvv~d~~g~  249 (354)
                        +++|++++++|.
T Consensus        83 ~~g~id~lv~~Ag~   96 (278)
T 1spx_A           83 KFGKLDILVNNAGA   96 (278)
T ss_dssp             HHSCCCEEEECCC-
T ss_pred             HcCCCCEEEECCCC
Confidence              479999999874

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=96.93  E-value=0.0084  Score=51.74  Aligned_cols=79  Identities=28%  Similarity=0.326  Sum_probs=50.0

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCC------------hhhHHHH----HhcCCceE---EcCCCCChhH
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRS------------SKRFEEA----KKFGVTDF---VNTSEHDRPI  228 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~------------~~~~~~~----~~lg~~~v---~~~~~~~~~~  228 (354)
                      .++++||+|+ |++|...+..+...|+ +|+.++++            .++.+.+    ++.+....   .|..+. .++
T Consensus         9 ~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~v   86 (287)
T 3pxx_A            9 QDKVVLVTGGARGQGRSHAVKLAEEGA-DIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDR-AAV   86 (287)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCH-HHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCH-HHH
Confidence            5789999987 9999999998889999 88888876            4443332    33444322   233222 122


Q ss_pred             HHHHHHHcC--CCccEEEEcccC
Q 018529          229 QEVIAEMTN--GGVDRSVECTGN  249 (354)
Q Consensus       229 ~~~i~~~~~--~~~dvv~d~~g~  249 (354)
                      .+.+++...  +++|++++++|.
T Consensus        87 ~~~~~~~~~~~g~id~lv~nAg~  109 (287)
T 3pxx_A           87 SRELANAVAEFGKLDVVVANAGI  109 (287)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCC
T ss_pred             HHHHHHHHHHcCCCCEEEECCCc
Confidence            222222211  379999999874

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=96.91  E-value=0.011  Score=50.73  Aligned_cols=79  Identities=20%  Similarity=0.273  Sum_probs=50.0

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCC------------hhhHHHH----HhcCCceE-E--cCCCCChhH
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRS------------SKRFEEA----KKFGVTDF-V--NTSEHDRPI  228 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~------------~~~~~~~----~~lg~~~v-~--~~~~~~~~~  228 (354)
                      .++++||+|+ |++|.+.+..+...|+ +|++++++            .++.+.+    ++.+.... +  |..+. .++
T Consensus        12 ~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~v   89 (278)
T 3sx2_A           12 TGKVAFITGAARGQGRAHAVRLAADGA-DIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDR-ESL   89 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCH-HHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCH-HHH
Confidence            5789999987 9999999988888999 89888876            4443332    33444322 2  22221 122


Q ss_pred             HHHHHHHcC--CCccEEEEcccC
Q 018529          229 QEVIAEMTN--GGVDRSVECTGN  249 (354)
Q Consensus       229 ~~~i~~~~~--~~~dvv~d~~g~  249 (354)
                      .+.+.+...  +++|++++++|.
T Consensus        90 ~~~~~~~~~~~g~id~lv~nAg~  112 (278)
T 3sx2_A           90 SAALQAGLDELGRLDIVVANAGI  112 (278)
T ss_dssp             HHHHHHHHHHHCCCCEEEECCCC
T ss_pred             HHHHHHHHHHcCCCCEEEECCCC
Confidence            222322211  479999999884

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=96.91  E-value=0.0043  Score=52.34  Aligned_cols=79  Identities=18%  Similarity=0.208  Sum_probs=51.9

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcc
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  247 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~  247 (354)
                      .++++||+|+ |.+|...++.+...|+ +|+++++++++.+.+.++.-...+..+-.+.+..+.+.+.. +++|++++++
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-~~id~lv~~A   82 (246)
T 2ag5_A            5 DGKVIILTAAAQGIGQAAALAFAREGA-KVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEV-ERLDVLFNVA   82 (246)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHC-SCCSEEEECC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHhccCceEEEeeCCCHHHHHHHHHHh-CCCCEEEECC
Confidence            4678999987 9999999998888999 89999998877655444321122222222222222332222 4799999998


Q ss_pred             cC
Q 018529          248 GN  249 (354)
Q Consensus       248 g~  249 (354)
                      |.
T Consensus        83 g~   84 (246)
T 2ag5_A           83 GF   84 (246)
T ss_dssp             CC
T ss_pred             cc
Confidence            74

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=96.89  E-value=0.01  Score=49.81  Aligned_cols=75  Identities=21%  Similarity=0.321  Sum_probs=51.1

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh-c-CCceEEcCCCCChhHHHHHHHHcC--CCccEE
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-F-GVTDFVNTSEHDRPIQEVIAEMTN--GGVDRS  243 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~-l-g~~~v~~~~~~~~~~~~~i~~~~~--~~~dvv  243 (354)
                      ++.++||+|+ |.+|...++.+...|+ +|+++++++++.+.+.+ + +. .++..+-.+.   +.++++..  +++|++
T Consensus         6 ~~~~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~-~~~~~D~~~~---~~~~~~~~~~~~id~v   80 (244)
T 1cyd_A            6 SGLRALVTGAGKGIGRDTVKALHASGA-KVVAVTRTNSDLVSLAKECPGI-EPVCVDLGDW---DATEKALGGIGPVDLL   80 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTC-EEEECCTTCH---HHHHHHHTTCCCCSEE
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCC-CcEEecCCCH---HHHHHHHHHcCCCCEE
Confidence            4678999987 9999999999888999 89999998877665433 3 33 2332222221   12222222  368999


Q ss_pred             EEccc
Q 018529          244 VECTG  248 (354)
Q Consensus       244 ~d~~g  248 (354)
                      ++++|
T Consensus        81 i~~Ag   85 (244)
T 1cyd_A           81 VNNAA   85 (244)
T ss_dssp             EECCC
T ss_pred             EECCc
Confidence            99988

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=96.89  E-value=0.011  Score=51.41  Aligned_cols=79  Identities=19%  Similarity=0.175  Sum_probs=49.3

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCCh--hhHHH----HHhcCCceEEcCCC-CC-hhH---HHHHHHHc
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS--KRFEE----AKKFGVTDFVNTSE-HD-RPI---QEVIAEMT  236 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~--~~~~~----~~~lg~~~v~~~~~-~~-~~~---~~~i~~~~  236 (354)
                      .++++||+|+ |++|.+.+..+...|+ +|+.++++.  ++.+.    +++.|....+..-+ .+ ..+   .+.+.+..
T Consensus        48 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  126 (294)
T 3r3s_A           48 KDRKALVTGGDSGIGRAAAIAYAREGA-DVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREAL  126 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            5789999987 9999999998889999 888887762  23322    23445433322212 12 112   22222222


Q ss_pred             CCCccEEEEcccC
Q 018529          237 NGGVDRSVECTGN  249 (354)
Q Consensus       237 ~~~~dvv~d~~g~  249 (354)
                       +++|++++++|.
T Consensus       127 -g~iD~lv~nAg~  138 (294)
T 3r3s_A          127 -GGLDILALVAGK  138 (294)
T ss_dssp             -TCCCEEEECCCC
T ss_pred             -CCCCEEEECCCC
Confidence             479999999874

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=96.88  E-value=0.014  Score=49.75  Aligned_cols=79  Identities=20%  Similarity=0.151  Sum_probs=50.8

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-H---hc--CCce-EEcCCCCChhHHHHHHHHcCCCc
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-K---KF--GVTD-FVNTSEHDRPIQEVIAEMTNGGV  240 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~---~l--g~~~-v~~~~~~~~~~~~~i~~~~~~~~  240 (354)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+ +   +.  +... .+..+-.+.+..+.+.+. -+++
T Consensus         9 ~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~-~g~i   86 (267)
T 3t4x_A            9 KGKTALVTGSTAGIGKAIATSLVAEGA-NVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEK-YPKV   86 (267)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHH-CCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHh-cCCC
Confidence            4688999987 9999999988888999 899999988765543 2   22  2211 121222222222233222 1479


Q ss_pred             cEEEEcccC
Q 018529          241 DRSVECTGN  249 (354)
Q Consensus       241 dvv~d~~g~  249 (354)
                      |++++++|.
T Consensus        87 d~lv~nAg~   95 (267)
T 3t4x_A           87 DILINNLGI   95 (267)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999884

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=96.87  E-value=0.006  Score=52.23  Aligned_cols=103  Identities=21%  Similarity=0.256  Sum_probs=61.4

Q ss_pred             CCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEE-cCChhhHHHH----HhcCCceE-E--cCCCCC--hhHHHHHHHHc
Q 018529          168 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGV-DRSSKRFEEA----KKFGVTDF-V--NTSEHD--RPIQEVIAEMT  236 (354)
Q Consensus       168 ~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v-~~~~~~~~~~----~~lg~~~v-~--~~~~~~--~~~~~~i~~~~  236 (354)
                      ..++++||+|+ |++|.+.++.+...|+ +|+.+ .+++++.+.+    ++.+.... +  |..+.+  +.+.+.+.+..
T Consensus        25 ~~~k~~lVTGas~GIG~aia~~la~~G~-~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  103 (267)
T 3u5t_A           25 ETNKVAIVTGASRGIGAAIAARLASDGF-TVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAF  103 (267)
T ss_dssp             --CCEEEEESCSSHHHHHHHHHHHHHTC-EEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            35789999987 9999998888888899 66665 5555554433    33444322 2  332221  11222222222


Q ss_pred             CCCccEEEEcccCh-------------------------HhHHHHHHHhhCCCceEEEEcCC
Q 018529          237 NGGVDRSVECTGNI-------------------------DNMISAFECVHDGWGVAVLVGVP  273 (354)
Q Consensus       237 ~~~~dvv~d~~g~~-------------------------~~~~~~~~~l~~~~g~~v~~g~~  273 (354)
                       +++|++++++|..                         ...+.+...+... |+++.++..
T Consensus       104 -g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-g~iv~isS~  163 (267)
T 3u5t_A          104 -GGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVG-GRIINMSTS  163 (267)
T ss_dssp             -SCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEECCT
T ss_pred             -CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-CeEEEEeCh
Confidence             3799999998742                         1223344455665 899998754

>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*

Probab=96.87  E-value=0.0041  Score=51.12  Aligned_cols=99  Identities=18%  Similarity=0.166  Sum_probs=69.1

Q ss_pred             cCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEE
Q 018529          165 AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSV  244 (354)
Q Consensus       165 ~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~  244 (354)
                      ..++++.+||-+|+|. |..+..+++. |. +|++++.+++..+.+++.+...+-.... +  +.+ +  ...+.+|+|+
T Consensus        42 ~~~~~~~~vLdiG~G~-G~~~~~l~~~-~~-~v~~~D~s~~~~~~a~~~~~~~~~~~~~-d--~~~-~--~~~~~~D~v~  112 (218)
T 3ou2_A           42 RAGNIRGDVLELASGT-GYWTRHLSGL-AD-RVTALDGSAEMIAEAGRHGLDNVEFRQQ-D--LFD-W--TPDRQWDAVF  112 (218)
T ss_dssp             TTTTSCSEEEEESCTT-SHHHHHHHHH-SS-EEEEEESCHHHHHHHGGGCCTTEEEEEC-C--TTS-C--CCSSCEEEEE
T ss_pred             hcCCCCCeEEEECCCC-CHHHHHHHhc-CC-eEEEEeCCHHHHHHHHhcCCCCeEEEec-c--ccc-C--CCCCceeEEE
Confidence            4478888999999875 7777788877 77 9999999999999998866433211111 1  111 1  2234899999


Q ss_pred             EcccC--------hHhHHHHHHHhhCCCceEEEEcCC
Q 018529          245 ECTGN--------IDNMISAFECVHDGWGVAVLVGVP  273 (354)
Q Consensus       245 d~~g~--------~~~~~~~~~~l~~~~g~~v~~g~~  273 (354)
                      ....-        ...+..+.+.|+++ |++++....
T Consensus       113 ~~~~l~~~~~~~~~~~l~~~~~~L~pg-G~l~~~~~~  148 (218)
T 3ou2_A          113 FAHWLAHVPDDRFEAFWESVRSAVAPG-GVVEFVDVT  148 (218)
T ss_dssp             EESCGGGSCHHHHHHHHHHHHHHEEEE-EEEEEEEEC
T ss_pred             EechhhcCCHHHHHHHHHHHHHHcCCC-eEEEEEeCC
Confidence            75321        35678888999997 998877543

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=96.87  E-value=0.0077  Score=50.95  Aligned_cols=96  Identities=21%  Similarity=0.259  Sum_probs=61.9

Q ss_pred             CCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcC--CCccEEEEc
Q 018529          170 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTN--GGVDRSVEC  246 (354)
Q Consensus       170 ~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~--~~~dvv~d~  246 (354)
                      ++++||+|+ |++|...+..+...|+ +|+++++++++.+.     ....++..+. .++.+.+++...  +++|+++++
T Consensus        22 ~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~-----~~~~~d~~d~-~~v~~~~~~~~~~~g~iD~li~~   94 (251)
T 3orf_A           22 SKNILVLGGSGALGAEVVKFFKSKSW-NTISIDFRENPNAD-----HSFTIKDSGE-EEIKSVIEKINSKSIKVDTFVCA   94 (251)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCTTSS-----EEEECSCSSH-HHHHHHHHHHHTTTCCEEEEEEC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCcccccc-----cceEEEeCCH-HHHHHHHHHHHHHcCCCCEEEEC
Confidence            678999987 9999999998889999 89999888765321     1112222221 223334444332  379999999


Q ss_pred             ccCh--------------------------HhHHHHHHHhhCCCceEEEEcCC
Q 018529          247 TGNI--------------------------DNMISAFECVHDGWGVAVLVGVP  273 (354)
Q Consensus       247 ~g~~--------------------------~~~~~~~~~l~~~~g~~v~~g~~  273 (354)
                      +|..                          ...+.+...+..+ |++++++..
T Consensus        95 Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-g~iv~isS~  146 (251)
T 3orf_A           95 AGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQG-GLFVLTGAS  146 (251)
T ss_dssp             CCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEECCG
T ss_pred             CccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccC-CEEEEEech
Confidence            8831                          0123344455565 899998764

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=96.86  E-value=0.0026  Score=54.09  Aligned_cols=79  Identities=24%  Similarity=0.341  Sum_probs=52.4

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCce-EE--cCCCCChhHHHHHHHHcC--C
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD-FV--NTSEHDRPIQEVIAEMTN--G  238 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~~-v~--~~~~~~~~~~~~i~~~~~--~  238 (354)
                      +++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.+    .+... .+  |..+. .++.+.+++...  +
T Consensus         5 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~~~g   82 (257)
T 3imf_A            5 KEKVVIITGGSSGMGKGMATRFAKEGA-RVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNT-DDIQKMIEQIDEKFG   82 (257)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCH-HHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCH-HHHHHHHHHHHHHcC
Confidence            4688999987 9999999998889999 89999999887665532    23322 22  33222 122222222211  4


Q ss_pred             CccEEEEcccC
Q 018529          239 GVDRSVECTGN  249 (354)
Q Consensus       239 ~~dvv~d~~g~  249 (354)
                      ++|++++++|.
T Consensus        83 ~id~lv~nAg~   93 (257)
T 3imf_A           83 RIDILINNAAG   93 (257)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999883

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=96.85  E-value=0.01  Score=51.15  Aligned_cols=80  Identities=23%  Similarity=0.327  Sum_probs=50.8

Q ss_pred             CCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcC-------------ChhhHHHH----HhcCCceE---EcCCCCCh
Q 018529          168 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR-------------SSKRFEEA----KKFGVTDF---VNTSEHDR  226 (354)
Q Consensus       168 ~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~-------------~~~~~~~~----~~lg~~~v---~~~~~~~~  226 (354)
                      -.++++||+|+ |++|.+.++.+...|+ +|+++++             ++++.+.+    ++.|....   .|..+. .
T Consensus        13 l~gk~~lVTGas~gIG~a~a~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~   90 (280)
T 3pgx_A           13 LQGRVAFITGAARGQGRSHAVRLAAEGA-DIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDD-A   90 (280)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCH-H
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCH-H
Confidence            46789999987 9999999998889999 8888877             45554433    33444322   233322 1


Q ss_pred             hHHHHHHHHc--CCCccEEEEcccC
Q 018529          227 PIQEVIAEMT--NGGVDRSVECTGN  249 (354)
Q Consensus       227 ~~~~~i~~~~--~~~~dvv~d~~g~  249 (354)
                      ++.+.+++..  .+++|++++++|.
T Consensus        91 ~v~~~~~~~~~~~g~id~lvnnAg~  115 (280)
T 3pgx_A           91 ALRELVADGMEQFGRLDVVVANAGV  115 (280)
T ss_dssp             HHHHHHHHHHHHHCCCCEEEECCCC
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCC
Confidence            2222222221  1479999999884

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=96.85  E-value=0.0038  Score=52.99  Aligned_cols=79  Identities=27%  Similarity=0.344  Sum_probs=52.7

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-HhcCCce-EE--cCCCCChhHHHHHHHHcC--CCcc
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTD-FV--NTSEHDRPIQEVIAEMTN--GGVD  241 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~~lg~~~-v~--~~~~~~~~~~~~i~~~~~--~~~d  241 (354)
                      .++++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+ ++++... .+  |..+. .++.+.+++...  +++|
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~g~iD   81 (254)
T 1hdc_A            4 SGKTVIITGGARGLGAEAARQAVAAGA-RVVLADVLDEEGAATARELGDAARYQHLDVTIE-EDWQRVVAYAREEFGSVD   81 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTGGGEEEEECCTTCH-HHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEecCCCH-HHHHHHHHHHHHHcCCCC
Confidence            4678999987 9999999999888999 899999998776654 4454322 22  33221 123333332211  3799


Q ss_pred             EEEEcccC
Q 018529          242 RSVECTGN  249 (354)
Q Consensus       242 vv~d~~g~  249 (354)
                      ++++++|.
T Consensus        82 ~lv~nAg~   89 (254)
T 1hdc_A           82 GLVNNAGI   89 (254)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999874

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=96.85  E-value=0.0057  Score=51.75  Aligned_cols=89  Identities=21%  Similarity=0.274  Sum_probs=56.3

Q ss_pred             CCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCCh-------------------hhHHHH----HhcCCc-eEEcCC-CC
Q 018529          170 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS-------------------KRFEEA----KKFGVT-DFVNTS-EH  224 (354)
Q Consensus       170 ~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~-------------------~~~~~~----~~lg~~-~v~~~~-~~  224 (354)
                      +.+|+|+|+|++|..+++.+...|.++++.++.+.                   .|.+.+    +++... .+..+. ..
T Consensus        31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~~  110 (249)
T 1jw9_B           31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNALL  110 (249)
T ss_dssp             HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSCC
T ss_pred             CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEeccC
Confidence            46899999999999999999999988999999886                   555443    333322 221111 11


Q ss_pred             ChhHHHHHHHHcCCCccEEEEcccChHhHHHHHHHhhC
Q 018529          225 DRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHD  262 (354)
Q Consensus       225 ~~~~~~~i~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~  262 (354)
                      +.   +.+.++. .++|+|+++++..+....+.+....
T Consensus       111 ~~---~~~~~~~-~~~DvVi~~~d~~~~~~~l~~~~~~  144 (249)
T 1jw9_B          111 DD---AELAALI-AEHDLVLDCTDNVAVRNQLNAGCFA  144 (249)
T ss_dssp             CH---HHHHHHH-HTSSEEEECCSSHHHHHHHHHHHHH
T ss_pred             CH---hHHHHHH-hCCCEEEEeCCCHHHHHHHHHHHHH
Confidence            11   1222221 2589999999886544444443333

>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*

Probab=96.84  E-value=0.0035  Score=53.25  Aligned_cols=95  Identities=24%  Similarity=0.310  Sum_probs=66.1

Q ss_pred             CCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCceEEcCCCCChhHHHHHHHHcCCCccE
Q 018529          167 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTNGGVDR  242 (354)
Q Consensus       167 ~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~~~~~~~dv  242 (354)
                      ++++++||-+|+|. |.+++.+++ .|. +|++++.++...+.+++    .+..  +.....+  +.+.   +..+.+|+
T Consensus       118 ~~~~~~VLDiGcG~-G~l~~~la~-~g~-~v~gvDi~~~~v~~a~~n~~~~~~~--v~~~~~d--~~~~---~~~~~fD~  187 (254)
T 2nxc_A          118 LRPGDKVLDLGTGS-GVLAIAAEK-LGG-KALGVDIDPMVLPQAEANAKRNGVR--PRFLEGS--LEAA---LPFGPFDL  187 (254)
T ss_dssp             CCTTCEEEEETCTT-SHHHHHHHH-TTC-EEEEEESCGGGHHHHHHHHHHTTCC--CEEEESC--HHHH---GGGCCEEE
T ss_pred             cCCCCEEEEecCCC-cHHHHHHHH-hCC-eEEEEECCHHHHHHHHHHHHHcCCc--EEEEECC--hhhc---CcCCCCCE
Confidence            67899999999976 777777776 577 99999999998887765    3443  1111222  3332   22347999


Q ss_pred             EEEccc---ChHhHHHHHHHhhCCCceEEEEcC
Q 018529          243 SVECTG---NIDNMISAFECVHDGWGVAVLVGV  272 (354)
Q Consensus       243 v~d~~g---~~~~~~~~~~~l~~~~g~~v~~g~  272 (354)
                      |+....   -...+..+.+.|+++ |++++.+.
T Consensus       188 Vv~n~~~~~~~~~l~~~~~~Lkpg-G~lils~~  219 (254)
T 2nxc_A          188 LVANLYAELHAALAPRYREALVPG-GRALLTGI  219 (254)
T ss_dssp             EEEECCHHHHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             EEECCcHHHHHHHHHHHHHHcCCC-CEEEEEee
Confidence            996542   124677788899997 99988654

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=96.84  E-value=0.009  Score=51.22  Aligned_cols=80  Identities=21%  Similarity=0.322  Sum_probs=52.7

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH----HhcCCce-EE--cCCCCC--hhHHHHHHHHcCC
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-FV--NTSEHD--RPIQEVIAEMTNG  238 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~----~~lg~~~-v~--~~~~~~--~~~~~~i~~~~~~  238 (354)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+    ++.+... .+  |..+.+  ..+.+.+.+...+
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   98 (273)
T 1ae1_A           20 KGTTALVTGGSKGIGYAIVEELAGLGA-RVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDG   98 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTS
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            4688999987 9999999999888999 899999998776543    2234332 22  332221  1122333333325


Q ss_pred             CccEEEEcccC
Q 018529          239 GVDRSVECTGN  249 (354)
Q Consensus       239 ~~dvv~d~~g~  249 (354)
                      ++|++++++|.
T Consensus        99 ~id~lv~nAg~  109 (273)
T 1ae1_A           99 KLNILVNNAGV  109 (273)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCcEEEECCCC
Confidence            79999999874

>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*

Probab=96.84  E-value=0.005  Score=52.07  Aligned_cols=102  Identities=19%  Similarity=0.202  Sum_probs=68.4

Q ss_pred             CCCCCCeEEEEcCChhHHHHHHHHHHc--CCcEEEEEcCChhhHHHHHh----cCCceEEcCCCCChhHHHHHHHHc---
Q 018529          166 KPERGSSVAVFGLGAVGLAAAEGARIA--GASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMT---  236 (354)
Q Consensus       166 ~~~~~~~vlI~G~g~~G~~a~~~a~~~--g~~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~~~---  236 (354)
                      ...++++||-+|+| .|..++.+|+.+  +. +|++++.+++..+.+++    .|...-+.....+  ..+.+..+.   
T Consensus        76 ~~~~~~~VLeiG~G-~G~~~~~la~~~~~~~-~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gd--a~~~l~~l~~~~  151 (247)
T 1sui_A           76 KLINAKNTMEIGVY-TGYSLLATALAIPEDG-KILAMDINKENYELGLPVIKKAGVDHKIDFREGP--ALPVLDEMIKDE  151 (247)
T ss_dssp             HHTTCCEEEEECCG-GGHHHHHHHHHSCTTC-EEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESC--HHHHHHHHHHSG
T ss_pred             HhhCcCEEEEeCCC-cCHHHHHHHHhCCCCC-EEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECC--HHHHHHHHHhcc
Confidence            34567899999987 488888999987  45 99999999998887765    4542111111222  334444332   


Q ss_pred             --CCCccEEEEcccC---hHhHHHHHHHhhCCCceEEEEcC
Q 018529          237 --NGGVDRSVECTGN---IDNMISAFECVHDGWGVAVLVGV  272 (354)
Q Consensus       237 --~~~~dvv~d~~g~---~~~~~~~~~~l~~~~g~~v~~g~  272 (354)
                        .+.||+||-....   ...++.+.+.|+++ |.+++-..
T Consensus       152 ~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpG-G~lv~d~~  191 (247)
T 1sui_A          152 KNHGSYDFIFVDADKDNYLNYHKRLIDLVKVG-GVIGYDNT  191 (247)
T ss_dssp             GGTTCBSEEEECSCSTTHHHHHHHHHHHBCTT-CCEEEECT
T ss_pred             CCCCCEEEEEEcCchHHHHHHHHHHHHhCCCC-eEEEEecC
Confidence              3579999854332   35678899999997 99876543

>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*

Probab=96.83  E-value=0.0037  Score=58.00  Aligned_cols=93  Identities=20%  Similarity=0.190  Sum_probs=70.9

Q ss_pred             CCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEc
Q 018529          167 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  246 (354)
Q Consensus       167 ~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~  246 (354)
                      .-.|.+|.|+|.|.+|..+++.++.+|+ +|++++++..+...+...|... .     +  +.+.+     ...|+|+.+
T Consensus       274 ~L~GktVgIIG~G~IG~~vA~~l~~~G~-~V~v~d~~~~~~~~a~~~G~~~-~-----~--l~ell-----~~aDiVi~~  339 (494)
T 3d64_A          274 MIAGKIAVVAGYGDVGKGCAQSLRGLGA-TVWVTEIDPICALQAAMEGYRV-V-----T--MEYAA-----DKADIFVTA  339 (494)
T ss_dssp             CCTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSCHHHHHHHHTTTCEE-C-----C--HHHHT-----TTCSEEEEC
T ss_pred             ccCCCEEEEEccCHHHHHHHHHHHHCCC-EEEEEeCChHhHHHHHHcCCEe-C-----C--HHHHH-----hcCCEEEEC
Confidence            3578999999999999999999999999 9999999988754455566532 1     1  33322     248999999


Q ss_pred             ccChHhH-HHHHHHhhCCCceEEEEcCCC
Q 018529          247 TGNIDNM-ISAFECVHDGWGVAVLVGVPS  274 (354)
Q Consensus       247 ~g~~~~~-~~~~~~l~~~~g~~v~~g~~~  274 (354)
                      ++....+ ...++.|+++ ..++.++...
T Consensus       340 ~~t~~lI~~~~l~~MK~g-AilINvgrg~  367 (494)
T 3d64_A          340 TGNYHVINHDHMKAMRHN-AIVCNIGHFD  367 (494)
T ss_dssp             SSSSCSBCHHHHHHCCTT-EEEEECSSSS
T ss_pred             CCcccccCHHHHhhCCCC-cEEEEcCCCc
Confidence            8765544 4677889997 8888888754

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=96.83  E-value=0.0056  Score=52.21  Aligned_cols=79  Identities=13%  Similarity=0.199  Sum_probs=48.1

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhh---HHHH----HhcCCceE-E--cCCCCChhHHHHHHHHcC
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR---FEEA----KKFGVTDF-V--NTSEHDRPIQEVIAEMTN  237 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~---~~~~----~~lg~~~v-~--~~~~~~~~~~~~i~~~~~  237 (354)
                      .++++||+|+ +++|.+.+..+...|+ +|+.++++.+.   .+.+    ++.|.... +  |..+. ..+.+.+.+...
T Consensus        10 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~-~~v~~~~~~~~~   87 (262)
T 3ksu_A           10 KNKVIVIAGGIKNLGALTAKTFALESV-NLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNE-EEVAKLFDFAEK   87 (262)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHTTSSC-EEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSH-HHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCH-HHHHHHHHHHHH
Confidence            5789999987 9999999888888999 88887665433   2222    22344322 2  23222 122222222211


Q ss_pred             --CCccEEEEcccC
Q 018529          238 --GGVDRSVECTGN  249 (354)
Q Consensus       238 --~~~dvv~d~~g~  249 (354)
                        +++|++++++|.
T Consensus        88 ~~g~iD~lvnnAg~  101 (262)
T 3ksu_A           88 EFGKVDIAINTVGK  101 (262)
T ss_dssp             HHCSEEEEEECCCC
T ss_pred             HcCCCCEEEECCCC
Confidence              479999999883

>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13

Probab=96.83  E-value=0.0031  Score=54.26  Aligned_cols=102  Identities=13%  Similarity=0.140  Sum_probs=69.7

Q ss_pred             hhhcCCCCCCeEEEEcCChhHHHHHHHHHHc--CCcEEEEEcCChhhHHHHHhc-----CCceEEcCCCCChhHHHHHHH
Q 018529          162 LNVAKPERGSSVAVFGLGAVGLAAAEGARIA--GASRIIGVDRSSKRFEEAKKF-----GVTDFVNTSEHDRPIQEVIAE  234 (354)
Q Consensus       162 ~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~--g~~~vi~v~~~~~~~~~~~~l-----g~~~v~~~~~~~~~~~~~i~~  234 (354)
                      .....++++++||-+|+| .|..+..+++..  +. +|++++.+++..+.+++.     |.+.+-.... +  +.+   .
T Consensus       103 ~~~~~~~~~~~VLD~G~G-~G~~~~~la~~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~-d--~~~---~  174 (275)
T 1yb2_A          103 IMRCGLRPGMDILEVGVG-SGNMSSYILYALNGKG-TLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRS-D--IAD---F  174 (275)
T ss_dssp             ---CCCCTTCEEEEECCT-TSHHHHHHHHHHTTSS-EEEEECSCHHHHHHHHHHHHTTSCCTTEEEECS-C--TTT---C
T ss_pred             HHHcCCCCcCEEEEecCC-CCHHHHHHHHHcCCCC-EEEEEECCHHHHHHHHHHHHhcCCCCcEEEEEC-c--hhc---c
Confidence            455678999999999987 478888888874  44 999999999988877652     5433211111 1  111   1


Q ss_pred             HcCCCccEEEEcccCh-HhHHHHHHHhhCCCceEEEEcC
Q 018529          235 MTNGGVDRSVECTGNI-DNMISAFECVHDGWGVAVLVGV  272 (354)
Q Consensus       235 ~~~~~~dvv~d~~g~~-~~~~~~~~~l~~~~g~~v~~g~  272 (354)
                      +..+.+|+|+.....+ ..++.+.+.|+++ |++++...
T Consensus       175 ~~~~~fD~Vi~~~~~~~~~l~~~~~~Lkpg-G~l~i~~~  212 (275)
T 1yb2_A          175 ISDQMYDAVIADIPDPWNHVQKIASMMKPG-SVATFYLP  212 (275)
T ss_dssp             CCSCCEEEEEECCSCGGGSHHHHHHTEEEE-EEEEEEES
T ss_pred             CcCCCccEEEEcCcCHHHHHHHHHHHcCCC-CEEEEEeC
Confidence            1223799999766544 5788999999997 99887753

>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*

Probab=96.82  E-value=0.0024  Score=51.27  Aligned_cols=101  Identities=18%  Similarity=0.289  Sum_probs=69.2

Q ss_pred             hhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCC-ceEEcCCCCChhHHHHHHHHc
Q 018529          162 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGV-TDFVNTSEHDRPIQEVIAEMT  236 (354)
Q Consensus       162 ~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~-~~v~~~~~~~~~~~~~i~~~~  236 (354)
                      .....+.++++||-+|+|. |..+..+++.. . +|++++.+++..+.+++    .+. ..+. ....+  +.+.+... 
T Consensus        26 ~~~~~~~~~~~vldiG~G~-G~~~~~l~~~~-~-~v~~~D~~~~~~~~a~~~~~~~~~~~~~~-~~~~d--~~~~~~~~-   98 (192)
T 1l3i_A           26 MCLAEPGKNDVAVDVGCGT-GGVTLELAGRV-R-RVYAIDRNPEAISTTEMNLQRHGLGDNVT-LMEGD--APEALCKI-   98 (192)
T ss_dssp             HHHHCCCTTCEEEEESCTT-SHHHHHHHTTS-S-EEEEEESCHHHHHHHHHHHHHTTCCTTEE-EEESC--HHHHHTTS-
T ss_pred             HHhcCCCCCCEEEEECCCC-CHHHHHHHHhc-C-EEEEEECCHHHHHHHHHHHHHcCCCcceE-EEecC--HHHhcccC-
Confidence            4455788999999999976 88888888776 4 99999999988887765    344 2221 11112  33322211 


Q ss_pred             CCCccEEEEcccC---hHhHHHHHHHhhCCCceEEEEc
Q 018529          237 NGGVDRSVECTGN---IDNMISAFECVHDGWGVAVLVG  271 (354)
Q Consensus       237 ~~~~dvv~d~~g~---~~~~~~~~~~l~~~~g~~v~~g  271 (354)
                       +.+|+|+.....   ...+..+.+.|+++ |++++..
T Consensus        99 -~~~D~v~~~~~~~~~~~~l~~~~~~l~~g-G~l~~~~  134 (192)
T 1l3i_A           99 -PDIDIAVVGGSGGELQEILRIIKDKLKPG-GRIIVTA  134 (192)
T ss_dssp             -CCEEEEEESCCTTCHHHHHHHHHHTEEEE-EEEEEEE
T ss_pred             -CCCCEEEECCchHHHHHHHHHHHHhcCCC-cEEEEEe
Confidence             379999976431   35677888889997 9888764

>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1

Probab=96.82  E-value=0.0045  Score=54.22  Aligned_cols=91  Identities=15%  Similarity=0.066  Sum_probs=61.6

Q ss_pred             CeEEEEcCChhHHHHHHHHHH--cCCcEEEEEcCChhh--HHHHHhcCCceEEcCCCCChhHHHHHHHHcCC-CccEEEE
Q 018529          171 SSVAVFGLGAVGLAAAEGARI--AGASRIIGVDRSSKR--FEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVE  245 (354)
Q Consensus       171 ~~vlI~G~g~~G~~a~~~a~~--~g~~~vi~v~~~~~~--~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~~dvv~d  245 (354)
                      -+|.|+|+|.+|...+..+..  -+.+.+.++++++++  .++++++|.....    .   ..+.+.+.+.+ ++|+||+
T Consensus         5 irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d~~~~~~~~~~a~~~g~~~~~----~---~~e~ll~~~~~~~iDvV~~   77 (312)
T 1nvm_B            5 LKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTY----A---GVEGLIKLPEFADIDFVFD   77 (312)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEES----S---HHHHHHHSGGGGGEEEEEE
T ss_pred             CEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEeCChhhhHHHHHHHcCCCccc----C---CHHHHHhccCCCCCcEEEE
Confidence            478999999999988887743  456455566777665  5677788874211    1   22333332223 6999999


Q ss_pred             cccChHhHHHHHHHhhC--CCceEEE
Q 018529          246 CTGNIDNMISAFECVHD--GWGVAVL  269 (354)
Q Consensus       246 ~~g~~~~~~~~~~~l~~--~~g~~v~  269 (354)
                      +++.....+.+..++..  + ..++.
T Consensus        78 atp~~~h~~~a~~al~a~~G-k~Vi~  102 (312)
T 1nvm_B           78 ATSASAHVQNEALLRQAKPG-IRLID  102 (312)
T ss_dssp             CSCHHHHHHHHHHHHHHCTT-CEEEE
T ss_pred             CCChHHHHHHHHHHHHhCCC-CEEEE
Confidence            99976777788888876  5 55544

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=96.82  E-value=0.0056  Score=52.04  Aligned_cols=79  Identities=23%  Similarity=0.315  Sum_probs=53.1

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH-hcCCce-EE--cCCCCChhHHHHHHHHcC--CCcc
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTD-FV--NTSEHDRPIQEVIAEMTN--GGVD  241 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~-~lg~~~-v~--~~~~~~~~~~~~i~~~~~--~~~d  241 (354)
                      .++++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+. +++... .+  |..+. .++.+.+++...  +++|
T Consensus         8 ~~k~vlITGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~g~id   85 (261)
T 3n74_A            8 EGKVALITGAGSGFGEGMAKRFAKGGA-KVVIVDRDKAGAERVAGEIGDAALAVAADISKE-ADVDAAVEAALSKFGKVD   85 (261)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTSH-HHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCceEEEEecCCCH-HHHHHHHHHHHHhcCCCC
Confidence            4688999987 9999999988888999 8999999998877653 455432 22  22221 122222322211  3799


Q ss_pred             EEEEcccC
Q 018529          242 RSVECTGN  249 (354)
Q Consensus       242 vv~d~~g~  249 (354)
                      ++++++|.
T Consensus        86 ~li~~Ag~   93 (261)
T 3n74_A           86 ILVNNAGI   93 (261)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCcc
Confidence            99999873

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=96.81  E-value=0.0071  Score=49.11  Aligned_cols=97  Identities=19%  Similarity=0.214  Sum_probs=59.7

Q ss_pred             CeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcccC
Q 018529          171 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN  249 (354)
Q Consensus       171 ~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~  249 (354)
                      .+|||+|+ |.+|...++.+...|. +|+++++++++.+.+...++. ++..+-.+  . +.+.+... ++|+||+++|.
T Consensus         4 ~~ilVtGatG~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~-~~~~D~~~--~-~~~~~~~~-~~d~vi~~a~~   77 (206)
T 1hdo_A            4 KKIAIFGATGQTGLTTLAQAVQAGY-EVTVLVRDSSRLPSEGPRPAH-VVVGDVLQ--A-ADVDKTVA-GQDAVIVLLGT   77 (206)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCGGGSCSSSCCCSE-EEESCTTS--H-HHHHHHHT-TCSEEEECCCC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEEeChhhcccccCCceE-EEEecCCC--H-HHHHHHHc-CCCEEEECccC
Confidence            68999998 9999999999988898 899999988765322112232 22222222  1 23333332 58999999885


Q ss_pred             hH----------hHHHHHHHhhC-CCceEEEEcCC
Q 018529          250 ID----------NMISAFECVHD-GWGVAVLVGVP  273 (354)
Q Consensus       250 ~~----------~~~~~~~~l~~-~~g~~v~~g~~  273 (354)
                      ..          ....+++.+.. +.+++++++..
T Consensus        78 ~~~~~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~  112 (206)
T 1hdo_A           78 RNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSA  112 (206)
T ss_dssp             TTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCG
T ss_pred             CCCCCccchHHHHHHHHHHHHHHhCCCeEEEEeee
Confidence            32          13333443332 22688888754

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=96.80  E-value=0.0057  Score=52.18  Aligned_cols=65  Identities=17%  Similarity=0.230  Sum_probs=51.4

Q ss_pred             CCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcccC
Q 018529          170 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN  249 (354)
Q Consensus       170 ~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~  249 (354)
                      +.+++|+|+|++|.+++..+...|. +|+++.|+.+|.+.+.++++. +..+.+    +         ..+|+|++|++.
T Consensus       118 ~k~vlvlGaGGaaraia~~L~~~G~-~v~V~nRt~~ka~~la~~~~~-~~~~~~----l---------~~~DiVInaTp~  182 (269)
T 3phh_A          118 YQNALILGAGGSAKALACELKKQGL-QVSVLNRSSRGLDFFQRLGCD-CFMEPP----K---------SAFDLIINATSA  182 (269)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCTTHHHHHHHTCE-EESSCC----S---------SCCSEEEECCTT
T ss_pred             CCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCe-EecHHH----h---------ccCCEEEEcccC
Confidence            8899999999999999999999995 999999999887765577753 333322    1         158999999864

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=96.80  E-value=0.0022  Score=55.86  Aligned_cols=73  Identities=15%  Similarity=0.104  Sum_probs=53.2

Q ss_pred             CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHH-HHHhcCCc--eEEcCCCCChhHHHHHHHHcCCCccEEEE
Q 018529          169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFE-EAKKFGVT--DFVNTSEHDRPIQEVIAEMTNGGVDRSVE  245 (354)
Q Consensus       169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~-~~~~lg~~--~v~~~~~~~~~~~~~i~~~~~~~~dvv~d  245 (354)
                      ++.+++|+|+|++|.+++..+...|+.+|++++++.++.+ ++++++..  .+++       + +.+.+.. +.+|+|++
T Consensus       140 ~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~~~~~-------~-~~~~~~~-~~aDivIn  210 (297)
T 2egg_A          140 DGKRILVIGAGGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRSAYFS-------L-AEAETRL-AEYDIIIN  210 (297)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSCCEEC-------H-HHHHHTG-GGCSEEEE
T ss_pred             CCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccCceee-------H-HHHHhhh-ccCCEEEE
Confidence            5789999999999999999999999878999999988865 44556542  2221       2 1232221 25899999


Q ss_pred             cccCh
Q 018529          246 CTGNI  250 (354)
Q Consensus       246 ~~g~~  250 (354)
                      +++..
T Consensus       211 ~t~~~  215 (297)
T 2egg_A          211 TTSVG  215 (297)
T ss_dssp             CSCTT
T ss_pred             CCCCC
Confidence            99863

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=96.80  E-value=0.0064  Score=51.40  Aligned_cols=79  Identities=22%  Similarity=0.225  Sum_probs=51.7

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCCh-hhHH-HHHhcCCce-EE--cCCCCChhHHHHHHHHc--CCCc
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS-KRFE-EAKKFGVTD-FV--NTSEHDRPIQEVIAEMT--NGGV  240 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~-~~~~-~~~~lg~~~-v~--~~~~~~~~~~~~i~~~~--~~~~  240 (354)
                      .++++||+|+ |++|...+..+...|+ +|+++++++ ++.+ .+++.+... .+  |..+. .++.+.+++..  .+++
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~~~g~i   83 (249)
T 2ew8_A            6 KDKLAVITGGANGIGRAIAERFAVEGA-DIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQP-GDVEAFGKQVISTFGRC   83 (249)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCH-HHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCchhHHHHHHHhcCCcEEEEEeecCCH-HHHHHHHHHHHHHcCCC
Confidence            4678999987 9999999998888999 898888887 5544 345555432 22  33221 12222222221  1479


Q ss_pred             cEEEEcccC
Q 018529          241 DRSVECTGN  249 (354)
Q Consensus       241 dvv~d~~g~  249 (354)
                      |++++++|.
T Consensus        84 d~lv~nAg~   92 (249)
T 2ew8_A           84 DILVNNAGI   92 (249)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999874

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=96.80  E-value=0.0048  Score=52.77  Aligned_cols=79  Identities=23%  Similarity=0.258  Sum_probs=51.4

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH-hc-----CCce-EE--cCCCCChhHHHHHHHHc--
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KF-----GVTD-FV--NTSEHDRPIQEVIAEMT--  236 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~-~l-----g~~~-v~--~~~~~~~~~~~~i~~~~--  236 (354)
                      .++++||+|+ |++|...++.+...|+ +|+++++++++.+.+. ++     +... .+  |..+. .++.+.+++..  
T Consensus        12 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~v~~~~~~~~~~   89 (267)
T 1iy8_A           12 TDRVVLITGGGSGLGRATAVRLAAEGA-KLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDE-AQVEAYVTATTER   89 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSH-HHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCH-HHHHHHHHHHHHH
Confidence            4688999987 9999999888888899 8999999887765432 22     4322 22  33222 12322332221  


Q ss_pred             CCCccEEEEcccC
Q 018529          237 NGGVDRSVECTGN  249 (354)
Q Consensus       237 ~~~~dvv~d~~g~  249 (354)
                      .+++|++++++|.
T Consensus        90 ~g~id~lv~nAg~  102 (267)
T 1iy8_A           90 FGRIDGFFNNAGI  102 (267)
T ss_dssp             HSCCSEEEECCCC
T ss_pred             cCCCCEEEECCCc
Confidence            1479999999873

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=96.79  E-value=0.0044  Score=53.13  Aligned_cols=80  Identities=19%  Similarity=0.264  Sum_probs=52.2

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH-hcCCceEEcCCCCC-hhHHHHHHHHc--CCCccEE
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTDFVNTSEHD-RPIQEVIAEMT--NGGVDRS  243 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~-~lg~~~v~~~~~~~-~~~~~~i~~~~--~~~~dvv  243 (354)
                      .++++||+|+ |++|...++.+...|+ +|+++++++++.+.+. ++.....+..+-.+ .++.+.+++..  .+++|++
T Consensus         8 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l   86 (270)
T 1yde_A            8 AGKVVVVTGGGRGIGAGIVRAFVNSGA-RVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCV   86 (270)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCeEEEcCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            4788999987 9999999999889999 8999999988766543 33322222222122 12222222221  1479999


Q ss_pred             EEcccC
Q 018529          244 VECTGN  249 (354)
Q Consensus       244 ~d~~g~  249 (354)
                      ++++|.
T Consensus        87 v~nAg~   92 (270)
T 1yde_A           87 VNNAGH   92 (270)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999874

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=96.79  E-value=0.013  Score=51.19  Aligned_cols=75  Identities=23%  Similarity=0.275  Sum_probs=54.4

Q ss_pred             CeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcccCh
Q 018529          171 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI  250 (354)
Q Consensus       171 ~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~~  250 (354)
                      .+|.|+|+|.+|...+..+...|. .|++.++++++.+.+.+.|.........+   .   +     ...|+||.++..+
T Consensus         8 ~~I~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~~~~~~e---~---~-----~~aDvvi~~vp~~   75 (303)
T 3g0o_A            8 FHVGIVGLGSMGMGAARSCLRAGL-STWGADLNPQACANLLAEGACGAAASARE---F---A-----GVVDALVILVVNA   75 (303)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCSEEESSSTT---T---T-----TTCSEEEECCSSH
T ss_pred             CeEEEECCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHcCCccccCCHHH---H---H-----hcCCEEEEECCCH
Confidence            479999999999998888888898 89999999999999888887541211111   1   0     1468888887765


Q ss_pred             HhHHHHH
Q 018529          251 DNMISAF  257 (354)
Q Consensus       251 ~~~~~~~  257 (354)
                      ...+..+
T Consensus        76 ~~~~~v~   82 (303)
T 3g0o_A           76 AQVRQVL   82 (303)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            4444443

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=96.79  E-value=0.0077  Score=51.40  Aligned_cols=74  Identities=19%  Similarity=0.252  Sum_probs=47.7

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceE-EcCCCCChhHHHHHHHHcC--CCccEEE
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHDRPIQEVIAEMTN--GGVDRSV  244 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v-~~~~~~~~~~~~~i~~~~~--~~~dvv~  244 (354)
                      .++++||+|+ |++|...+..+...|+ +|+++++++++     .-.+..+ .|..+. ..+.+.+.+...  +++|+++
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~-----~~~~~~~~~Dl~~~-~~v~~~~~~~~~~~g~iD~lv   79 (264)
T 2dtx_A            7 RDKVVIVTGASMGIGRAIAERFVDEGS-KVIDLSIHDPG-----EAKYDHIECDVTNP-DQVKASIDHIFKEYGSISVLV   79 (264)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESSCCC-----SCSSEEEECCTTCH-HHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEecCccc-----CCceEEEEecCCCH-HHHHHHHHHHHHHcCCCCEEE
Confidence            3678999987 9999999999888999 89888887665     1112111 233322 122222322211  3699999


Q ss_pred             EcccC
Q 018529          245 ECTGN  249 (354)
Q Consensus       245 d~~g~  249 (354)
                      +++|.
T Consensus        80 ~~Ag~   84 (264)
T 2dtx_A           80 NNAGI   84 (264)
T ss_dssp             ECCCC
T ss_pred             ECCCC
Confidence            99873

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=96.78  E-value=0.0051  Score=52.34  Aligned_cols=80  Identities=19%  Similarity=0.275  Sum_probs=52.0

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-H---hcCCce-EE--cCCCCC--hhHHHHHHHHcCC
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-K---KFGVTD-FV--NTSEHD--RPIQEVIAEMTNG  238 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~---~lg~~~-v~--~~~~~~--~~~~~~i~~~~~~  238 (354)
                      .++++||+|+ |.+|...++.+...|+ +|+++++++++.+.+ +   +.+... .+  |..+.+  ..+.+.+.+...+
T Consensus         8 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   86 (260)
T 2ae2_A            8 EGCTALVTGGSRGIGYGIVEELASLGA-SVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHG   86 (260)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTT
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4788999987 9999999988888999 899999988775543 2   234322 12  332211  1122223333325


Q ss_pred             CccEEEEcccC
Q 018529          239 GVDRSVECTGN  249 (354)
Q Consensus       239 ~~dvv~d~~g~  249 (354)
                      ++|++++++|.
T Consensus        87 ~id~lv~~Ag~   97 (260)
T 2ae2_A           87 KLNILVNNAGI   97 (260)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999873

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=96.78  E-value=0.0029  Score=52.99  Aligned_cols=98  Identities=9%  Similarity=0.042  Sum_probs=61.9

Q ss_pred             CeEEEEcC-ChhHHHHHHHHHHcC-CcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEccc
Q 018529          171 SSVAVFGL-GAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  248 (354)
Q Consensus       171 ~~vlI~G~-g~~G~~a~~~a~~~g-~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g  248 (354)
                      .+|||+|+ |.+|...++.+...| + +|+++++++++.+.+...++. ++..+-.+.   +.+.+... ++|+||.++|
T Consensus        24 k~vlVtGatG~iG~~l~~~L~~~G~~-~V~~~~R~~~~~~~~~~~~~~-~~~~Dl~d~---~~~~~~~~-~~D~vv~~a~   97 (236)
T 3qvo_A           24 KNVLILGAGGQIARHVINQLADKQTI-KQTLFARQPAKIHKPYPTNSQ-IIMGDVLNH---AALKQAMQ-GQDIVYANLT   97 (236)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCTTE-EEEEEESSGGGSCSSCCTTEE-EEECCTTCH---HHHHHHHT-TCSEEEEECC
T ss_pred             cEEEEEeCCcHHHHHHHHHHHhCCCc-eEEEEEcChhhhcccccCCcE-EEEecCCCH---HHHHHHhc-CCCEEEEcCC
Confidence            57999997 999999999998899 6 899999988765433222332 222211221   22333322 5899999988


Q ss_pred             ChHh---HHHHHHHhhCC-CceEEEEcCCC
Q 018529          249 NIDN---MISAFECVHDG-WGVAVLVGVPS  274 (354)
Q Consensus       249 ~~~~---~~~~~~~l~~~-~g~~v~~g~~~  274 (354)
                      ....   .+.+++.+... .+++|+++...
T Consensus        98 ~~~~~~~~~~~~~~~~~~~~~~iV~iSS~~  127 (236)
T 3qvo_A           98 GEDLDIQANSVIAAMKACDVKRLIFVLSLG  127 (236)
T ss_dssp             STTHHHHHHHHHHHHHHTTCCEEEEECCCC
T ss_pred             CCchhHHHHHHHHHHHHcCCCEEEEEecce
Confidence            6432   33445544432 26899888643

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=96.77  E-value=0.01  Score=51.86  Aligned_cols=76  Identities=20%  Similarity=0.257  Sum_probs=51.3

Q ss_pred             CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCC---hhhHHHH-Hh----cCCc-eEEcCCCCChhHHHHHHHHcCC
Q 018529          168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS---SKRFEEA-KK----FGVT-DFVNTSEHDRPIQEVIAEMTNG  238 (354)
Q Consensus       168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~---~~~~~~~-~~----lg~~-~v~~~~~~~~~~~~~i~~~~~~  238 (354)
                      -.++++||+|+|++|.+++..+...|+++|+++.|+   .++.+.+ ++    ++.. .++.+.+. .++.+.+.     
T Consensus       152 l~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~-~~l~~~l~-----  225 (315)
T 3tnl_A          152 IIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDH-EQLRKEIA-----  225 (315)
T ss_dssp             CTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCH-HHHHHHHH-----
T ss_pred             ccCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchH-HHHHhhhc-----
Confidence            368899999999999999999999999889999998   6665543 22    2332 23443321 11222221     


Q ss_pred             CccEEEEcccC
Q 018529          239 GVDRSVECTGN  249 (354)
Q Consensus       239 ~~dvv~d~~g~  249 (354)
                      .+|+|++|++.
T Consensus       226 ~aDiIINaTp~  236 (315)
T 3tnl_A          226 ESVIFTNATGV  236 (315)
T ss_dssp             TCSEEEECSST
T ss_pred             CCCEEEECccC
Confidence            48999999864

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=96.77  E-value=0.0089  Score=49.91  Aligned_cols=77  Identities=26%  Similarity=0.293  Sum_probs=50.8

Q ss_pred             CCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH-----hcCCceE-E--cCCCCChhHHHH---HHHHcC
Q 018529          170 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-----KFGVTDF-V--NTSEHDRPIQEV---IAEMTN  237 (354)
Q Consensus       170 ~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~-----~lg~~~v-~--~~~~~~~~~~~~---i~~~~~  237 (354)
                      ++++||+|+ |++|...++.+...|+ +|+.++++.++.+.+.     +.+.... +  |..+. .++.+.   +.+.. 
T Consensus         2 ~k~vlITGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~v~~~~~~~~~~~-   78 (235)
T 3l77_A            2 MKVAVITGASRGIGEAIARALARDGY-ALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKA-ESVEEFSKKVLERF-   78 (235)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCH-HHHHHHCC-HHHHH-
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCH-HHHHHHHHHHHHhc-
Confidence            578999987 9999999999999999 8999999988765442     2344322 2  22221 112221   22221 


Q ss_pred             CCccEEEEcccC
Q 018529          238 GGVDRSVECTGN  249 (354)
Q Consensus       238 ~~~dvv~d~~g~  249 (354)
                      +++|++++++|.
T Consensus        79 g~id~li~~Ag~   90 (235)
T 3l77_A           79 GDVDVVVANAGL   90 (235)
T ss_dssp             SSCSEEEECCCC
T ss_pred             CCCCEEEECCcc
Confidence            379999999874

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=96.77  E-value=0.0025  Score=53.74  Aligned_cols=74  Identities=12%  Similarity=0.184  Sum_probs=46.3

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHH-----HHHHcC--CCc
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEV-----IAEMTN--GGV  240 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~-----i~~~~~--~~~  240 (354)
                      .++++||+|+ |++|...++.+.. |. .|+++++++++.+.+.+......+..+     +.+.     +.+...  +++
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~-g~-~v~~~~r~~~~~~~~~~~~~~~~~~~D-----~~~~~~~~~~~~~~~~~~~i   76 (245)
T 3e9n_A            4 KKKIAVVTGATGGMGIEIVKDLSR-DH-IVYALGRNPEHLAALAEIEGVEPIESD-----IVKEVLEEGGVDKLKNLDHV   76 (245)
T ss_dssp             --CEEEEESTTSHHHHHHHHHHTT-TS-EEEEEESCHHHHHHHHTSTTEEEEECC-----HHHHHHTSSSCGGGTTCSCC
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHhC-CC-eEEEEeCCHHHHHHHHhhcCCcceecc-----cchHHHHHHHHHHHHhcCCC
Confidence            3678999987 9999987776655 87 899999999888877664322222211     2111     111111  379


Q ss_pred             cEEEEcccC
Q 018529          241 DRSVECTGN  249 (354)
Q Consensus       241 dvv~d~~g~  249 (354)
                      |++++++|.
T Consensus        77 d~lv~~Ag~   85 (245)
T 3e9n_A           77 DTLVHAAAV   85 (245)
T ss_dssp             SEEEECC--
T ss_pred             CEEEECCCc
Confidence            999999875

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=96.76  E-value=0.0051  Score=51.94  Aligned_cols=79  Identities=19%  Similarity=0.336  Sum_probs=51.6

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH----hcCCce-EE--cCCCCChhHHHHHHHHcC--C
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD-FV--NTSEHDRPIQEVIAEMTN--G  238 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~----~lg~~~-v~--~~~~~~~~~~~~i~~~~~--~  238 (354)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.    +.|... .+  |..+. ..+.+.+.+...  +
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~-~~~~~~~~~~~~~~g   83 (247)
T 2jah_A            6 QGKVALITGASSGIGEATARALAAEGA-AVAIAARRVEKLRALGDELTAAGAKVHVLELDVADR-QGVDAAVASTVEALG   83 (247)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCH-HHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCH-HHHHHHHHHHHHHcC
Confidence            4678999987 9999999988888999 8999999887765432    234322 22  33222 122222222211  4


Q ss_pred             CccEEEEcccC
Q 018529          239 GVDRSVECTGN  249 (354)
Q Consensus       239 ~~dvv~d~~g~  249 (354)
                      ++|++++++|.
T Consensus        84 ~id~lv~nAg~   94 (247)
T 2jah_A           84 GLDILVNNAGI   94 (247)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999998873

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=96.76  E-value=0.0052  Score=52.48  Aligned_cols=79  Identities=25%  Similarity=0.363  Sum_probs=52.2

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-HhcCCc-eEE--cCCCCChhHHHHHHHHc--CCCcc
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVT-DFV--NTSEHDRPIQEVIAEMT--NGGVD  241 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~~lg~~-~v~--~~~~~~~~~~~~i~~~~--~~~~d  241 (354)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+ ++++.. ..+  |..+. .++.+.+++..  .+++|
T Consensus         5 ~~k~vlITGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~-~~v~~~~~~~~~~~g~iD   82 (263)
T 2a4k_A            5 SGKTILVTGAASGIGRAALDLFAREGA-SLVAVDREERLLAEAVAALEAEAIAVVADVSDP-KAVEAVFAEALEEFGRLH   82 (263)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTCCSSEEEEECCTTSH-HHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCH-HHHHHHHHHHHHHcCCCc
Confidence            4678999987 9999999998888999 899999998876654 344422 122  33222 12222222221  14689


Q ss_pred             EEEEcccC
Q 018529          242 RSVECTGN  249 (354)
Q Consensus       242 vv~d~~g~  249 (354)
                      ++++++|.
T Consensus        83 ~lvnnAg~   90 (263)
T 2a4k_A           83 GVAHFAGV   90 (263)
T ss_dssp             EEEEGGGG
T ss_pred             EEEECCCC
Confidence            99999874

>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}

Probab=96.76  E-value=0.0087  Score=52.46  Aligned_cols=90  Identities=18%  Similarity=0.254  Sum_probs=67.3

Q ss_pred             CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcc
Q 018529          168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  247 (354)
Q Consensus       168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~  247 (354)
                      -.|.+|.|+|.|.+|...++.++.+|. +|++.+++.++. .+.++|+..    .  +  +.+.+++     .|+|+.++
T Consensus       140 l~g~~vgIIG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~~-~~~~~g~~~----~--~--l~ell~~-----aDvVvl~~  204 (313)
T 2ekl_A          140 LAGKTIGIVGFGRIGTKVGIIANAMGM-KVLAYDILDIRE-KAEKINAKA----V--S--LEELLKN-----SDVISLHV  204 (313)
T ss_dssp             CTTCEEEEESCSHHHHHHHHHHHHTTC-EEEEECSSCCHH-HHHHTTCEE----C--C--HHHHHHH-----CSEEEECC
T ss_pred             CCCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEECCCcchh-HHHhcCcee----c--C--HHHHHhh-----CCEEEEec
Confidence            467899999999999999999999999 999999888765 466778642    1  1  4443332     79999998


Q ss_pred             cChH----hH-HHHHHHhhCCCceEEEEcCC
Q 018529          248 GNID----NM-ISAFECVHDGWGVAVLVGVP  273 (354)
Q Consensus       248 g~~~----~~-~~~~~~l~~~~g~~v~~g~~  273 (354)
                      +...    .+ ...+..++++ +.++.++..
T Consensus       205 P~~~~t~~li~~~~l~~mk~g-a~lIn~arg  234 (313)
T 2ekl_A          205 TVSKDAKPIIDYPQFELMKDN-VIIVNTSRA  234 (313)
T ss_dssp             CCCTTSCCSBCHHHHHHSCTT-EEEEESSCG
T ss_pred             cCChHHHHhhCHHHHhcCCCC-CEEEECCCC
Confidence            7432    22 4667889996 888877653

>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}

Probab=96.75  E-value=0.024  Score=46.86  Aligned_cols=114  Identities=17%  Similarity=0.066  Sum_probs=66.1

Q ss_pred             CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChh-hH-HHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEc
Q 018529          169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK-RF-EEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  246 (354)
Q Consensus       169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~-~~-~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~  246 (354)
                      .|.+|||+|+|.+|...+..+...|+ .|++++.+.. .. +++.+.++. .+ ......+      .+  .++|+||-+
T Consensus        30 ~gk~VLVVGgG~va~~ka~~Ll~~GA-~VtVvap~~~~~l~~l~~~~~i~-~i-~~~~~~~------dL--~~adLVIaA   98 (223)
T 3dfz_A           30 KGRSVLVVGGGTIATRRIKGFLQEGA-AITVVAPTVSAEINEWEAKGQLR-VK-RKKVGEE------DL--LNVFFIVVA   98 (223)
T ss_dssp             TTCCEEEECCSHHHHHHHHHHGGGCC-CEEEECSSCCHHHHHHHHTTSCE-EE-CSCCCGG------GS--SSCSEEEEC
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEECCCCCHHHHHHHHcCCcE-EE-ECCCCHh------Hh--CCCCEEEEC
Confidence            47899999999999999999999999 7888865432 23 333333332 22 2222111      01  269999999


Q ss_pred             ccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhhc-cccEEEEEe
Q 018529          247 TGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTF  296 (354)
Q Consensus       247 ~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g~~  296 (354)
                      ++.+ ..+..+...+.. |..|.....+....+.++.. +. ..+++.-+.
T Consensus        99 T~d~-~~N~~I~~~ak~-gi~VNvvD~p~~~~f~~Pai-v~rg~l~iaIST  146 (223)
T 3dfz_A           99 TNDQ-AVNKFVKQHIKN-DQLVNMASSFSDGNIQIPAQ-FSRGRLSLAIST  146 (223)
T ss_dssp             CCCT-HHHHHHHHHSCT-TCEEEC-----CCSEECCEE-EEETTEEEEEEC
T ss_pred             CCCH-HHHHHHHHHHhC-CCEEEEeCCcccCeEEEeeE-EEeCCEEEEEEC
Confidence            9985 445444444556 88887766543334333332 22 455554443

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=96.75  E-value=0.0052  Score=52.48  Aligned_cols=80  Identities=20%  Similarity=0.291  Sum_probs=52.9

Q ss_pred             CCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH----hcCCce-EE--cCCCCChhHHHHHHHHc--C
Q 018529          168 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD-FV--NTSEHDRPIQEVIAEMT--N  237 (354)
Q Consensus       168 ~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~----~lg~~~-v~--~~~~~~~~~~~~i~~~~--~  237 (354)
                      -.++++||+|+ |++|.+.+..+...|+ +|+.+++++++.+.+.    +.+... .+  |..+. .++.+.+.+..  .
T Consensus         9 l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~~~   86 (264)
T 3ucx_A            9 LTDKVVVISGVGPALGTTLARRCAEQGA-DLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDD-AQVAHLVDETMKAY   86 (264)
T ss_dssp             TTTCEEEEESCCTTHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCH-HHHHHHHHHHHHHT
T ss_pred             cCCcEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCH-HHHHHHHHHHHHHc
Confidence            46789999987 9999999888888999 8999999987765542    234332 22  33322 12222222221  1


Q ss_pred             CCccEEEEcccC
Q 018529          238 GGVDRSVECTGN  249 (354)
Q Consensus       238 ~~~dvv~d~~g~  249 (354)
                      +++|++++++|.
T Consensus        87 g~id~lv~nAg~   98 (264)
T 3ucx_A           87 GRVDVVINNAFR   98 (264)
T ss_dssp             SCCSEEEECCCS
T ss_pred             CCCcEEEECCCC
Confidence            479999999864

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=96.75  E-value=0.0069  Score=51.61  Aligned_cols=79  Identities=32%  Similarity=0.480  Sum_probs=51.5

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH-hc----CCce-EE--cCCCCChhHHHHHHHHcC--
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KF----GVTD-FV--NTSEHDRPIQEVIAEMTN--  237 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~-~l----g~~~-v~--~~~~~~~~~~~~i~~~~~--  237 (354)
                      +++++||+|+ |++|...++.+...|+ +|+++++++++.+.+. ++    +... .+  |..+. .++.+.+++...  
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~   83 (263)
T 3ai3_A            6 SGKVAVITGSSSGIGLAIAEGFAKEGA-HIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATP-EGVDAVVESVRSSF   83 (263)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSH-HHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCH-HHHHHHHHHHHHHc
Confidence            4678999987 9999999998888999 8999999887765432 22    4322 22  33221 122222222211  


Q ss_pred             CCccEEEEcccC
Q 018529          238 GGVDRSVECTGN  249 (354)
Q Consensus       238 ~~~dvv~d~~g~  249 (354)
                      +++|++++++|.
T Consensus        84 g~id~lv~~Ag~   95 (263)
T 3ai3_A           84 GGADILVNNAGT   95 (263)
T ss_dssp             SSCSEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            379999999874

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=96.75  E-value=0.0054  Score=51.68  Aligned_cols=81  Identities=21%  Similarity=0.285  Sum_probs=52.6

Q ss_pred             CCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH----hcCC--ceEE--cCCCCCh-hHHHHHHHHc-
Q 018529          168 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGV--TDFV--NTSEHDR-PIQEVIAEMT-  236 (354)
Q Consensus       168 ~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~----~lg~--~~v~--~~~~~~~-~~~~~i~~~~-  236 (354)
                      -+++++||+|+ |++|...+..+...|+ +|+.+++++++.+.+.    +.+.  ..++  +.+..+. ++.+.+++.. 
T Consensus        12 l~~k~vlITGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~   90 (247)
T 3i1j_A           12 LKGRVILVTGAARGIGAAAARAYAAHGA-SVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEH   90 (247)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHH
Confidence            35789999987 9999999988888999 8999999988766543    2332  1222  2222221 2222222221 


Q ss_pred             -CCCccEEEEcccC
Q 018529          237 -NGGVDRSVECTGN  249 (354)
Q Consensus       237 -~~~~dvv~d~~g~  249 (354)
                       .+++|++++++|.
T Consensus        91 ~~g~id~lv~nAg~  104 (247)
T 3i1j_A           91 EFGRLDGLLHNASI  104 (247)
T ss_dssp             HHSCCSEEEECCCC
T ss_pred             hCCCCCEEEECCcc
Confidence             1379999999874

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=96.74  E-value=0.0052  Score=52.73  Aligned_cols=80  Identities=19%  Similarity=0.182  Sum_probs=51.9

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH----HhcCCce-EEcCCCCC-hhHHHHHHHHc--CCC
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-FVNTSEHD-RPIQEVIAEMT--NGG  239 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~----~~lg~~~-v~~~~~~~-~~~~~~i~~~~--~~~  239 (354)
                      .++++||+|+ |.+|...+..+...|+ +|+++++++++.+.+    ++.+... .+..+-.+ ..+.+.+.+..  .++
T Consensus        30 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~  108 (272)
T 1yb1_A           30 TGEIVLITGAGHGIGRLTAYEFAKLKS-KLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGD  108 (272)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHCCC
Confidence            4688999987 9999999998888999 899999988766543    2234322 22222122 12333333221  247


Q ss_pred             ccEEEEcccC
Q 018529          240 VDRSVECTGN  249 (354)
Q Consensus       240 ~dvv~d~~g~  249 (354)
                      +|++++++|.
T Consensus       109 iD~li~~Ag~  118 (272)
T 1yb1_A          109 VSILVNNAGV  118 (272)
T ss_dssp             CSEEEECCCC
T ss_pred             CcEEEECCCc
Confidence            9999999874

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=96.74  E-value=0.0071  Score=51.75  Aligned_cols=80  Identities=25%  Similarity=0.404  Sum_probs=52.1

Q ss_pred             CCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-H----hcCCce-EE--cCCCCChhHHHHHHHHc--
Q 018529          168 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-K----KFGVTD-FV--NTSEHDRPIQEVIAEMT--  236 (354)
Q Consensus       168 ~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~----~lg~~~-v~--~~~~~~~~~~~~i~~~~--  236 (354)
                      -.++++||+|+ |++|...++.+...|+ +|+++++++++.+.+ +    +.+... .+  |..+. .++.+.+.+..  
T Consensus        19 l~~k~~lVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~   96 (267)
T 1vl8_A           19 LRGRVALVTGGSRGLGFGIAQGLAEAGC-SVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNY-EEVKKLLEAVKEK   96 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCH-HHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCH-HHHHHHHHHHHHH
Confidence            35688999987 9999999998888999 899999988765543 2    225432 22  33221 12222222221  


Q ss_pred             CCCccEEEEcccC
Q 018529          237 NGGVDRSVECTGN  249 (354)
Q Consensus       237 ~~~~dvv~d~~g~  249 (354)
                      .+++|++++++|.
T Consensus        97 ~g~iD~lvnnAg~  109 (267)
T 1vl8_A           97 FGKLDTVVNAAGI  109 (267)
T ss_dssp             HSCCCEEEECCCC
T ss_pred             cCCCCEEEECCCc
Confidence            1479999999874

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=96.74  E-value=0.024  Score=43.77  Aligned_cols=78  Identities=9%  Similarity=0.112  Sum_probs=53.1

Q ss_pred             CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCC-hhhHHHHHh---cCCceEEcCCCCChhHHHHHHHHcCCCccEEE
Q 018529          169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS-SKRFEEAKK---FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSV  244 (354)
Q Consensus       169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~-~~~~~~~~~---lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~  244 (354)
                      ..++++|.|+|.+|...++.+...|. .|++++++ +++.+.+.+   .|.. ++..+..+   .+.+++..-.++|+|+
T Consensus         2 ~~~~vlI~G~G~vG~~la~~L~~~g~-~V~vid~~~~~~~~~~~~~~~~~~~-~i~gd~~~---~~~l~~a~i~~ad~vi   76 (153)
T 1id1_A            2 RKDHFIVCGHSILAINTILQLNQRGQ-NVTVISNLPEDDIKQLEQRLGDNAD-VIPGDSND---SSVLKKAGIDRCRAIL   76 (153)
T ss_dssp             CCSCEEEECCSHHHHHHHHHHHHTTC-CEEEEECCCHHHHHHHHHHHCTTCE-EEESCTTS---HHHHHHHTTTTCSEEE
T ss_pred             CCCcEEEECCCHHHHHHHHHHHHCCC-CEEEEECCChHHHHHHHHhhcCCCe-EEEcCCCC---HHHHHHcChhhCCEEE
Confidence            35689999999999999999999998 89999887 465554432   3543 33222222   2234444224799999


Q ss_pred             EcccChH
Q 018529          245 ECTGNID  251 (354)
Q Consensus       245 d~~g~~~  251 (354)
                      -+++..+
T Consensus        77 ~~~~~d~   83 (153)
T 1id1_A           77 ALSDNDA   83 (153)
T ss_dssp             ECSSCHH
T ss_pred             EecCChH
Confidence            9998743

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=96.73  E-value=0.0037  Score=53.80  Aligned_cols=79  Identities=20%  Similarity=0.294  Sum_probs=50.9

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-Hhc---CCceEE--cCCCCChhHHHHHHHHc--CCC
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKF---GVTDFV--NTSEHDRPIQEVIAEMT--NGG  239 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~~l---g~~~v~--~~~~~~~~~~~~i~~~~--~~~  239 (354)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+ +++   +....+  |..+. .++.+.+++..  .++
T Consensus        28 ~~k~vlVTGas~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~-~~v~~~~~~~~~~~g~  105 (276)
T 2b4q_A           28 AGRIALVTGGSRGIGQMIAQGLLEAGA-RVFICARDAEACADTATRLSAYGDCQAIPADLSSE-AGARRLAQALGELSAR  105 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSH-HHHHHHHHHHHHHCSC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCH-HHHHHHHHHHHHhcCC
Confidence            4678999987 9999999998888999 899999988776543 222   311111  22221 12222222221  247


Q ss_pred             ccEEEEcccC
Q 018529          240 VDRSVECTGN  249 (354)
Q Consensus       240 ~dvv~d~~g~  249 (354)
                      +|++++++|.
T Consensus       106 iD~lvnnAg~  115 (276)
T 2b4q_A          106 LDILVNNAGT  115 (276)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999873

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=96.73  E-value=0.0043  Score=53.54  Aligned_cols=79  Identities=22%  Similarity=0.409  Sum_probs=51.8

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH----HhcCC---ce-E--EcCCCCChhHHHHHHHHcC
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGV---TD-F--VNTSEHDRPIQEVIAEMTN  237 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~----~~lg~---~~-v--~~~~~~~~~~~~~i~~~~~  237 (354)
                      .++++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+    ++.+.   .. .  .|..+. .++.+.+++...
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~   87 (281)
T 3svt_A           10 QDRTYLVTGGGSGIGKGVAAGLVAAGA-SVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNE-DETARAVDAVTA   87 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSH-HHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCH-HHHHHHHHHHHH
Confidence            4789999987 9999999988888999 899999998775543    33343   11 1  122222 122222322211


Q ss_pred             --CCccEEEEcccC
Q 018529          238 --GGVDRSVECTGN  249 (354)
Q Consensus       238 --~~~dvv~d~~g~  249 (354)
                        +++|++++++|.
T Consensus        88 ~~g~id~lv~nAg~  101 (281)
T 3svt_A           88 WHGRLHGVVHCAGG  101 (281)
T ss_dssp             HHSCCCEEEECCCC
T ss_pred             HcCCCCEEEECCCc
Confidence              479999999885

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=96.73  E-value=0.0053  Score=52.63  Aligned_cols=79  Identities=19%  Similarity=0.289  Sum_probs=52.7

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-HhcCCce-E--EcCCCCChhHHHHHHHHcC--CCcc
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTD-F--VNTSEHDRPIQEVIAEMTN--GGVD  241 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~~lg~~~-v--~~~~~~~~~~~~~i~~~~~--~~~d  241 (354)
                      .++++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+ ++++... .  .|..+. .++.+.+++...  +++|
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~~~g~id   87 (271)
T 3tzq_B           10 ENKVAIITGACGGIGLETSRVLARAGA-RVVLADLPETDLAGAAASVGRGAVHHVVDLTNE-VSVRALIDFTIDTFGRLD   87 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECTTSCHHHHHHHHCTTCEEEECCTTCH-HHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCH-HHHHHHHHHHHHHcCCCC
Confidence            4789999987 9999999998889999 899999988776654 4455432 2  233322 122222222211  3799


Q ss_pred             EEEEcccC
Q 018529          242 RSVECTGN  249 (354)
Q Consensus       242 vv~d~~g~  249 (354)
                      ++++++|.
T Consensus        88 ~lv~nAg~   95 (271)
T 3tzq_B           88 IVDNNAAH   95 (271)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999874

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=96.73  E-value=0.01  Score=50.07  Aligned_cols=74  Identities=22%  Similarity=0.241  Sum_probs=50.9

Q ss_pred             CCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEE-cCCCCChhHHHHHHHHcCCCccEEE
Q 018529          167 PERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFV-NTSEHDRPIQEVIAEMTNGGVDRSV  244 (354)
Q Consensus       167 ~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~-~~~~~~~~~~~~i~~~~~~~~dvv~  244 (354)
                      .-+++++||+|+ |++|...++.+...|+ +|++++++++.   +++++....+ |.   ..++.+.+.+..  ++|+++
T Consensus        16 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~---~~~~~~~~~~~D~---~~~~~~~~~~~~--~iD~lv   86 (249)
T 1o5i_A           16 GIRDKGVLVLAASRGIGRAVADVLSQEGA-EVTICARNEEL---LKRSGHRYVVCDL---RKDLDLLFEKVK--EVDILV   86 (249)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHH---HHHTCSEEEECCT---TTCHHHHHHHSC--CCSEEE
T ss_pred             ccCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHH---HHhhCCeEEEeeH---HHHHHHHHHHhc--CCCEEE
Confidence            346789999987 9999999988888999 89999888744   3344532222 22   112444444432  699999


Q ss_pred             EcccC
Q 018529          245 ECTGN  249 (354)
Q Consensus       245 d~~g~  249 (354)
                      +++|.
T Consensus        87 ~~Ag~   91 (249)
T 1o5i_A           87 LNAGG   91 (249)
T ss_dssp             ECCCC
T ss_pred             ECCCC
Confidence            99873

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=96.73  E-value=0.0053  Score=53.03  Aligned_cols=79  Identities=18%  Similarity=0.270  Sum_probs=52.1

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCce-EE--cCCCCChhHHHHHHHHc--CC
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD-FV--NTSEHDRPIQEVIAEMT--NG  238 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~~-v~--~~~~~~~~~~~~i~~~~--~~  238 (354)
                      +++++||+|+ |++|.+.++.+...|+ +|+.++++.++.+.+.+    .+... .+  |..+. .++.+.+.+..  .+
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~-~~v~~~~~~~~~~~g  104 (283)
T 3v8b_A           27 PSPVALITGAGSGIGRATALALAADGV-TVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDE-LQMRNAVRDLVLKFG  104 (283)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCH-HHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCH-HHHHHHHHHHHHHhC
Confidence            5788999987 9999999988888999 89999999887665432    23322 22  22222 12222232221  14


Q ss_pred             CccEEEEcccC
Q 018529          239 GVDRSVECTGN  249 (354)
Q Consensus       239 ~~dvv~d~~g~  249 (354)
                      ++|++++++|.
T Consensus       105 ~iD~lVnnAg~  115 (283)
T 3v8b_A          105 HLDIVVANAGI  115 (283)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999884

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=96.73  E-value=0.01  Score=51.24  Aligned_cols=79  Identities=24%  Similarity=0.305  Sum_probs=50.7

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH----HhcCCce-EE--cCCCCChhHHHHHHHHc--CC
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-FV--NTSEHDRPIQEVIAEMT--NG  238 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~----~~lg~~~-v~--~~~~~~~~~~~~i~~~~--~~  238 (354)
                      .++++||+|+ |.+|...+..+...|+ +|+++++++++.+.+    ++.+... .+  |..+. ..+.+.+.+..  .+
T Consensus        43 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~-~~v~~~~~~~~~~~~  120 (285)
T 2c07_A           43 ENKVALVTGAGRGIGREIAKMLAKSVS-HVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKK-EEISEVINKILTEHK  120 (285)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSS-EEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCH-HHHHHHHHHHHHHCS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCH-HHHHHHHHHHHHhcC
Confidence            3678999987 9999999888888898 888888887765543    2234432 22  22221 22333333221  24


Q ss_pred             CccEEEEcccC
Q 018529          239 GVDRSVECTGN  249 (354)
Q Consensus       239 ~~dvv~d~~g~  249 (354)
                      ++|++|+++|.
T Consensus       121 ~id~li~~Ag~  131 (285)
T 2c07_A          121 NVDILVNNAGI  131 (285)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999874

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=96.72  E-value=0.016  Score=50.16  Aligned_cols=87  Identities=21%  Similarity=0.235  Sum_probs=61.3

Q ss_pred             CeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcccCh
Q 018529          171 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI  250 (354)
Q Consensus       171 ~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~~  250 (354)
                      .+|.|+|+|.+|...+..+...|. .|++.++++++.+.+.+.|...   ..+    ..+.+..     .|+||.|+..+
T Consensus         2 ~~i~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~---~~~----~~~~~~~-----aDvvi~~vp~~   68 (287)
T 3pef_A            2 QKFGFIGLGIMGSAMAKNLVKAGC-SVTIWNRSPEKAEELAALGAER---AAT----PCEVVES-----CPVTFAMLADP   68 (287)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSGGGGHHHHHTTCEE---CSS----HHHHHHH-----CSEEEECCSSH
T ss_pred             CEEEEEeecHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCee---cCC----HHHHHhc-----CCEEEEEcCCH
Confidence            478999999999998888888898 8999999999998888777532   111    3333332     68888888865


Q ss_pred             HhHHHHH-------HHhhCCCceEEEEc
Q 018529          251 DNMISAF-------ECVHDGWGVAVLVG  271 (354)
Q Consensus       251 ~~~~~~~-------~~l~~~~g~~v~~g  271 (354)
                      ...+..+       ..++++ ..++..+
T Consensus        69 ~~~~~v~~~~~~l~~~l~~~-~~vi~~s   95 (287)
T 3pef_A           69 AAAEEVCFGKHGVLEGIGEG-RGYVDMS   95 (287)
T ss_dssp             HHHHHHHHSTTCHHHHCCTT-CEEEECS
T ss_pred             HHHHHHHcCcchHhhcCCCC-CEEEeCC
Confidence            4444444       445554 5555554

>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3

Probab=96.72  E-value=0.0054  Score=56.67  Aligned_cols=93  Identities=24%  Similarity=0.313  Sum_probs=70.9

Q ss_pred             CCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEc
Q 018529          167 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  246 (354)
Q Consensus       167 ~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~  246 (354)
                      .-.|.+|.|+|.|.+|..+++.++.+|+ +|++++++..+...+...|+. +.     +  +.+.+     ...|+|+.+
T Consensus       254 ~l~GktVgIIG~G~IG~~vA~~l~~~G~-~Viv~d~~~~~~~~a~~~g~~-~~-----~--l~ell-----~~aDiVi~~  319 (479)
T 1v8b_A          254 LISGKIVVICGYGDVGKGCASSMKGLGA-RVYITEIDPICAIQAVMEGFN-VV-----T--LDEIV-----DKGDFFITC  319 (479)
T ss_dssp             CCTTSEEEEECCSHHHHHHHHHHHHHTC-EEEEECSCHHHHHHHHTTTCE-EC-----C--HHHHT-----TTCSEEEEC
T ss_pred             ccCCCEEEEEeeCHHHHHHHHHHHhCcC-EEEEEeCChhhHHHHHHcCCE-ec-----C--HHHHH-----hcCCEEEEC
Confidence            4578999999999999999999999999 999999998876555566763 21     1  33322     248999999


Q ss_pred             ccChHhH-HHHHHHhhCCCceEEEEcCCC
Q 018529          247 TGNIDNM-ISAFECVHDGWGVAVLVGVPS  274 (354)
Q Consensus       247 ~g~~~~~-~~~~~~l~~~~g~~v~~g~~~  274 (354)
                      ++....+ ...++.|+++ ..++.++...
T Consensus       320 ~~t~~lI~~~~l~~MK~g-ailiNvgrg~  347 (479)
T 1v8b_A          320 TGNVDVIKLEHLLKMKNN-AVVGNIGHFD  347 (479)
T ss_dssp             CSSSSSBCHHHHTTCCTT-CEEEECSSTT
T ss_pred             CChhhhcCHHHHhhcCCC-cEEEEeCCCC
Confidence            8765544 3677788997 8898888754

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=96.72  E-value=0.0055  Score=52.19  Aligned_cols=79  Identities=15%  Similarity=0.220  Sum_probs=51.7

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-HhcCCc-eEE--cCCCCChhHHHHHHHHcC--CCcc
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVT-DFV--NTSEHDRPIQEVIAEMTN--GGVD  241 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~~lg~~-~v~--~~~~~~~~~~~~i~~~~~--~~~d  241 (354)
                      .++++||+|+ |++|...++.+...|+ +|+++++++++.+.+ +++... ..+  |..+. ..+.+.+++...  +++|
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~-~~v~~~~~~~~~~~g~iD   83 (260)
T 1nff_A            6 TGKVALVSGGARGMGASHVRAMVAEGA-KVVFGDILDEEGKAMAAELADAARYVHLDVTQP-AQWKAAVDTAVTAFGGLH   83 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTGGGEEEEECCTTCH-HHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhcCceEEEecCCCH-HHHHHHHHHHHHHcCCCC
Confidence            4688999987 9999999988888999 899999988776654 333321 122  33222 122233332211  3799


Q ss_pred             EEEEcccC
Q 018529          242 RSVECTGN  249 (354)
Q Consensus       242 vv~d~~g~  249 (354)
                      ++++++|.
T Consensus        84 ~lv~~Ag~   91 (260)
T 1nff_A           84 VLVNNAGI   91 (260)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999873

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=96.72  E-value=0.0054  Score=51.69  Aligned_cols=79  Identities=25%  Similarity=0.314  Sum_probs=52.3

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH----hcCCce-EE--cCCCCChhHHHHHHHHc--CC
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD-FV--NTSEHDRPIQEVIAEMT--NG  238 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~----~lg~~~-v~--~~~~~~~~~~~~i~~~~--~~  238 (354)
                      .++++||+|+ |++|...++.+...|+ +|+.+++++++.+.+.    +.+... .+  |..+. .++.+.+++..  .+
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~   81 (247)
T 3lyl_A            4 NEKVALVTGASRGIGFEVAHALASKGA-TVVGTATSQASAEKFENSMKEKGFKARGLVLNISDI-ESIQNFFAEIKAENL   81 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCH-HHHHHHHHHHHHTTC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCH-HHHHHHHHHHHHHcC
Confidence            4678999987 9999998888888899 8999999987765542    334432 22  22221 22333333322  23


Q ss_pred             CccEEEEcccC
Q 018529          239 GVDRSVECTGN  249 (354)
Q Consensus       239 ~~dvv~d~~g~  249 (354)
                      ++|++++++|.
T Consensus        82 ~id~li~~Ag~   92 (247)
T 3lyl_A           82 AIDILVNNAGI   92 (247)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999874

>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A

Probab=96.72  E-value=0.012  Score=49.09  Aligned_cols=103  Identities=18%  Similarity=0.209  Sum_probs=68.6

Q ss_pred             hhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCC--ceEEc-CCCCChhHHHHHHHHcCCC
Q 018529          163 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV--TDFVN-TSEHDRPIQEVIAEMTNGG  239 (354)
Q Consensus       163 ~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~--~~v~~-~~~~~~~~~~~i~~~~~~~  239 (354)
                      ....++++++||-+|+|. |..+..+++..|..+|++++.+++..+.+++.-.  ..+.. ..+... ... .... .+.
T Consensus        68 ~~~~~~~~~~VLDlGcG~-G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~-~~~-~~~~-~~~  143 (230)
T 1fbn_A           68 KVMPIKRDSKILYLGASA-GTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANK-PQE-YANI-VEK  143 (230)
T ss_dssp             CCCCCCTTCEEEEESCCS-SHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTC-GGG-GTTT-SCC
T ss_pred             cccCCCCCCEEEEEcccC-CHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCC-ccc-cccc-Ccc
Confidence            445678899999999986 8889999998874499999999988877755311  12211 111110 000 0011 147


Q ss_pred             ccEEEEcccCh----HhHHHHHHHhhCCCceEEEE
Q 018529          240 VDRSVECTGNI----DNMISAFECVHDGWGVAVLV  270 (354)
Q Consensus       240 ~dvv~d~~g~~----~~~~~~~~~l~~~~g~~v~~  270 (354)
                      +|+|+.....+    ..+..+.+.|+++ |++++.
T Consensus       144 ~D~v~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~i~  177 (230)
T 1fbn_A          144 VDVIYEDVAQPNQAEILIKNAKWFLKKG-GYGMIA  177 (230)
T ss_dssp             EEEEEECCCSTTHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             EEEEEEecCChhHHHHHHHHHHHhCCCC-cEEEEE
Confidence            99999765553    3478888899997 998875

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=96.72  E-value=0.022  Score=48.88  Aligned_cols=79  Identities=24%  Similarity=0.286  Sum_probs=49.6

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcC-------------ChhhHHHH----HhcCCceE-E--cCCCCChh
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR-------------SSKRFEEA----KKFGVTDF-V--NTSEHDRP  227 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~-------------~~~~~~~~----~~lg~~~v-~--~~~~~~~~  227 (354)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++             +.++.+.+    ++.+.... +  |..+. ..
T Consensus        10 ~~k~~lVTGas~GIG~a~a~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~   87 (277)
T 3tsc_A           10 EGRVAFITGAARGQGRAHAVRMAAEGA-DIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDF-DR   87 (277)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCH-HH
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCH-HH
Confidence            5789999987 9999999998889999 8888877             44444332    23343322 2  22221 12


Q ss_pred             HHHHHHHHcC--CCccEEEEcccC
Q 018529          228 IQEVIAEMTN--GGVDRSVECTGN  249 (354)
Q Consensus       228 ~~~~i~~~~~--~~~dvv~d~~g~  249 (354)
                      +.+.+++...  +++|++++++|.
T Consensus        88 v~~~~~~~~~~~g~id~lvnnAg~  111 (277)
T 3tsc_A           88 LRKVVDDGVAALGRLDIIVANAGV  111 (277)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCC
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCC
Confidence            2222322211  479999999874

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=96.71  E-value=0.0035  Score=53.45  Aligned_cols=80  Identities=21%  Similarity=0.250  Sum_probs=52.7

Q ss_pred             CCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH----hcCCce-EE--cCCCCChhHHHHHHHHc--C
Q 018529          168 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD-FV--NTSEHDRPIQEVIAEMT--N  237 (354)
Q Consensus       168 ~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~----~lg~~~-v~--~~~~~~~~~~~~i~~~~--~  237 (354)
                      -+++++||+|+ |++|...+..+...|+ +|++++++.++.+.+.    +.+... ++  |..+. ..+.+.+.+..  .
T Consensus        27 l~~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~v~~~~~~~~~~~  104 (262)
T 3rkr_A           27 LSGQVAVVTGASRGIGAAIARKLGSLGA-RVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHS-DAIAAFATGVLAAH  104 (262)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCH-HHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCH-HHHHHHHHHHHHhc
Confidence            35789999987 9999999888888899 8999999988765542    234332 22  22221 12222222221  1


Q ss_pred             CCccEEEEcccC
Q 018529          238 GGVDRSVECTGN  249 (354)
Q Consensus       238 ~~~dvv~d~~g~  249 (354)
                      +.+|++++++|.
T Consensus       105 g~id~lv~~Ag~  116 (262)
T 3rkr_A          105 GRCDVLVNNAGV  116 (262)
T ss_dssp             SCCSEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence            379999999885

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=96.71  E-value=0.0043  Score=52.92  Aligned_cols=79  Identities=24%  Similarity=0.315  Sum_probs=51.6

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH----HhcCC-c-eEE--cCCCCChhHHHHHHHHcC--
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGV-T-DFV--NTSEHDRPIQEVIAEMTN--  237 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~----~~lg~-~-~v~--~~~~~~~~~~~~i~~~~~--  237 (354)
                      .++++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+    ++.+. . ..+  |..+. .++.+.+.+...  
T Consensus         9 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~~~   86 (262)
T 3pk0_A            9 QGRSVVVTGGTKGIGRGIATVFARAGA-NVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDR-AQCDALAGRAVEEF   86 (262)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSH-HHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCH-HHHHHHHHHHHHHh
Confidence            4788999987 9999999998889999 899999998876543    23332 1 222  22221 122222222211  


Q ss_pred             CCccEEEEcccC
Q 018529          238 GGVDRSVECTGN  249 (354)
Q Consensus       238 ~~~dvv~d~~g~  249 (354)
                      +++|++++++|.
T Consensus        87 g~id~lvnnAg~   98 (262)
T 3pk0_A           87 GGIDVVCANAGV   98 (262)
T ss_dssp             SCCSEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            379999999883

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.71  E-value=0.0034  Score=54.15  Aligned_cols=79  Identities=25%  Similarity=0.339  Sum_probs=51.0

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH-h---cCC---c-eEE--cCCCCChhHHHHHHHHcC
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-K---FGV---T-DFV--NTSEHDRPIQEVIAEMTN  237 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~-~---lg~---~-~v~--~~~~~~~~~~~~i~~~~~  237 (354)
                      .++++||+|+ |++|...++.+...|+ +|+++++++++.+.+. +   .+.   . ..+  |..+. ..+.+.+++...
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~   82 (280)
T 1xkq_A            5 SNKTVIITGSSNGIGRTTAILFAQEGA-NVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTE-DGQDQIINSTLK   82 (280)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSH-HHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCH-HHHHHHHHHHHH
Confidence            4678999987 9999999988888999 8999999987765432 2   232   2 122  33222 122222222211


Q ss_pred             --CCccEEEEcccC
Q 018529          238 --GGVDRSVECTGN  249 (354)
Q Consensus       238 --~~~dvv~d~~g~  249 (354)
                        +++|++++++|.
T Consensus        83 ~~g~iD~lv~nAg~   96 (280)
T 1xkq_A           83 QFGKIDVLVNNAGA   96 (280)
T ss_dssp             HHSCCCEEEECCCC
T ss_pred             hcCCCCEEEECCCC
Confidence              379999999873

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=96.71  E-value=0.006  Score=52.61  Aligned_cols=79  Identities=22%  Similarity=0.300  Sum_probs=53.1

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH-hcCCceE-E--cCCCCC--hhHHHHHHHHcCCCcc
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTDF-V--NTSEHD--RPIQEVIAEMTNGGVD  241 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~-~lg~~~v-~--~~~~~~--~~~~~~i~~~~~~~~d  241 (354)
                      .++++||+|+ |++|.+.+..+...|+ +|+++++++++.+.+. +++.... +  |..+.+  ..+.+.+.+.. +++|
T Consensus         4 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~iD   81 (281)
T 3zv4_A            4 TGEVALITGGASGLGRALVDRFVAEGA-RVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAF-GKID   81 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhc-CCCC
Confidence            4688999987 9999999998889999 8999999988876654 3443322 2  222211  11222232222 4799


Q ss_pred             EEEEcccC
Q 018529          242 RSVECTGN  249 (354)
Q Consensus       242 vv~d~~g~  249 (354)
                      ++++++|.
T Consensus        82 ~lvnnAg~   89 (281)
T 3zv4_A           82 TLIPNAGI   89 (281)
T ss_dssp             EEECCCCC
T ss_pred             EEEECCCc
Confidence            99999874

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=96.69  E-value=0.0087  Score=50.89  Aligned_cols=79  Identities=18%  Similarity=0.310  Sum_probs=48.9

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEE-cCChhhHHHH----HhcCCce-EE--cCCCCChhHHHHHHHHcC--
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGV-DRSSKRFEEA----KKFGVTD-FV--NTSEHDRPIQEVIAEMTN--  237 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v-~~~~~~~~~~----~~lg~~~-v~--~~~~~~~~~~~~i~~~~~--  237 (354)
                      .++++||+|+ |++|.+.++.+...|+ +|+.+ .+++++.+.+    ++.+... .+  |..+. .++.+.+++...  
T Consensus         7 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~~~   84 (259)
T 3edm_A            7 TNRTIVVAGAGRDIGRACAIRFAQEGA-NVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNA-AEVEAAISAAADKF   84 (259)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCH-HHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCH-HHHHHHHHHHHHHh
Confidence            4789999987 9999999988888899 77776 5565544432    3345432 22  32222 122222222211  


Q ss_pred             CCccEEEEcccC
Q 018529          238 GGVDRSVECTGN  249 (354)
Q Consensus       238 ~~~dvv~d~~g~  249 (354)
                      +++|++++++|.
T Consensus        85 g~id~lv~nAg~   96 (259)
T 3edm_A           85 GEIHGLVHVAGG   96 (259)
T ss_dssp             CSEEEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence            479999998874

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=96.69  E-value=0.0065  Score=52.44  Aligned_cols=97  Identities=13%  Similarity=0.086  Sum_probs=62.4

Q ss_pred             eEEEEcC-ChhHHHHHHHHHHc-CCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcccC
Q 018529          172 SVAVFGL-GAVGLAAAEGARIA-GASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN  249 (354)
Q Consensus       172 ~vlI~G~-g~~G~~a~~~a~~~-g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~  249 (354)
                      +|||+|+ |.+|...++.+... |. +|++++++.++...+...++..+. .+-.+  . +.+.+... ++|+||.+++.
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~-~V~~~~R~~~~~~~~~~~~v~~~~-~D~~d--~-~~l~~~~~-~~d~vi~~a~~   75 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHID-HFHIGVRNVEKVPDDWRGKVSVRQ-LDYFN--Q-ESMVEAFK-GMDTVVFIPSI   75 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCT-TEEEEESSGGGSCGGGBTTBEEEE-CCTTC--H-HHHHHHTT-TCSEEEECCCC
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCC-cEEEEECCHHHHHHhhhCCCEEEE-cCCCC--H-HHHHHHHh-CCCEEEEeCCC
Confidence            5899997 99999988887777 77 888888988876555445554332 22122  1 23444433 69999999875


Q ss_pred             h-------HhHHHHHHHhhCC-CceEEEEcCCC
Q 018529          250 I-------DNMISAFECVHDG-WGVAVLVGVPS  274 (354)
Q Consensus       250 ~-------~~~~~~~~~l~~~-~g~~v~~g~~~  274 (354)
                      .       .....+++.+... .+++++++...
T Consensus        76 ~~~~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~  108 (289)
T 3e48_A           76 IHPSFKRIPEVENLVYAAKQSGVAHIIFIGYYA  108 (289)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHTTCCEEEEEEESC
T ss_pred             CccchhhHHHHHHHHHHHHHcCCCEEEEEcccC
Confidence            2       2233445544443 25788887654

>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*

Probab=96.69  E-value=0.0024  Score=52.90  Aligned_cols=102  Identities=16%  Similarity=0.099  Sum_probs=67.9

Q ss_pred             CCCCCCeEEEEcCChhHHHHHHHHHHc--CCcEEEEEcCChhhHHHHHh----cCCceEEcCCCCChhHHHHHHHHc---
Q 018529          166 KPERGSSVAVFGLGAVGLAAAEGARIA--GASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMT---  236 (354)
Q Consensus       166 ~~~~~~~vlI~G~g~~G~~a~~~a~~~--g~~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~~~---  236 (354)
                      ...++.+||-+|+| .|..++.+|+.+  +. +|++++.+++..+.+++    .|...-+.....+  ..+.+..+.   
T Consensus        55 ~~~~~~~vLdiG~G-~G~~~~~la~~~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d--~~~~~~~~~~~~  130 (223)
T 3duw_A           55 QIQGARNILEIGTL-GGYSTIWLARGLSSGG-RVVTLEASEKHADIARSNIERANLNDRVEVRTGL--ALDSLQQIENEK  130 (223)
T ss_dssp             HHHTCSEEEEECCT-TSHHHHHHHTTCCSSC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESC--HHHHHHHHHHTT
T ss_pred             HhhCCCEEEEecCC-ccHHHHHHHHhCCCCC-EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcC--HHHHHHHHHhcC
Confidence            44678899999987 488888999887  45 99999999988877654    4543211111222  333333332   


Q ss_pred             CCCccEEEEcccC---hHhHHHHHHHhhCCCceEEEEcC
Q 018529          237 NGGVDRSVECTGN---IDNMISAFECVHDGWGVAVLVGV  272 (354)
Q Consensus       237 ~~~~dvv~d~~g~---~~~~~~~~~~l~~~~g~~v~~g~  272 (354)
                      .+.||+||-....   ...++.+.+.|+++ |.+++-..
T Consensus       131 ~~~fD~v~~d~~~~~~~~~l~~~~~~L~pg-G~lv~~~~  168 (223)
T 3duw_A          131 YEPFDFIFIDADKQNNPAYFEWALKLSRPG-TVIIGDNV  168 (223)
T ss_dssp             CCCCSEEEECSCGGGHHHHHHHHHHTCCTT-CEEEEESC
T ss_pred             CCCcCEEEEcCCcHHHHHHHHHHHHhcCCC-cEEEEeCC
Confidence            1469999854422   35678889999997 98776543

>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6

Probab=96.68  E-value=0.015  Score=50.56  Aligned_cols=87  Identities=18%  Similarity=0.246  Sum_probs=61.8

Q ss_pred             eEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcccChH
Q 018529          172 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNID  251 (354)
Q Consensus       172 ~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~~~  251 (354)
                      +|.|+|+|.+|...+..+...|. .|++.++++++.+.+++.|...   ..+    ..+.+.     .+|+||.+++.+.
T Consensus         7 ~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~---~~~----~~~~~~-----~~D~vi~~v~~~~   73 (299)
T 1vpd_A            7 KVGFIGLGIMGKPMSKNLLKAGY-SLVVSDRNPEAIADVIAAGAET---AST----AKAIAE-----QCDVIITMLPNSP   73 (299)
T ss_dssp             EEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEE---CSS----HHHHHH-----HCSEEEECCSSHH
T ss_pred             eEEEECchHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHCCCee---cCC----HHHHHh-----CCCEEEEECCCHH
Confidence            68999999999998888888898 8999999999988887777531   111    333332     3799999998655


Q ss_pred             hHHHHH-------HHhhCCCceEEEEcC
Q 018529          252 NMISAF-------ECVHDGWGVAVLVGV  272 (354)
Q Consensus       252 ~~~~~~-------~~l~~~~g~~v~~g~  272 (354)
                      .++..+       ..++++ ..++.++.
T Consensus        74 ~~~~~~~~~~~l~~~l~~~-~~vv~~s~  100 (299)
T 1vpd_A           74 HVKEVALGENGIIEGAKPG-TVLIDMSS  100 (299)
T ss_dssp             HHHHHHHSTTCHHHHCCTT-CEEEECSC
T ss_pred             HHHHHHhCcchHhhcCCCC-CEEEECCC
Confidence            555444       445664 56665543

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=96.68  E-value=0.0046  Score=52.56  Aligned_cols=79  Identities=20%  Similarity=0.236  Sum_probs=51.7

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH----hcCCce-EE--cCCCCC--hhHHHHHHHHcCC
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD-FV--NTSEHD--RPIQEVIAEMTNG  238 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~----~lg~~~-v~--~~~~~~--~~~~~~i~~~~~~  238 (354)
                      .++++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+.    +.+... .+  |..+.+  +.+.+.+.+.. +
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g   88 (256)
T 3gaf_A           11 NDAVAIVTGAAAGIGRAIAGTFAKAGA-SVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQF-G   88 (256)
T ss_dssp             TTCEEEECSCSSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc-C
Confidence            5788999987 9999998888888899 8999999887765442    334432 22  222211  11222222222 3


Q ss_pred             CccEEEEcccC
Q 018529          239 GVDRSVECTGN  249 (354)
Q Consensus       239 ~~dvv~d~~g~  249 (354)
                      ++|++++++|.
T Consensus        89 ~id~lv~nAg~   99 (256)
T 3gaf_A           89 KITVLVNNAGG   99 (256)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999874

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=96.68  E-value=0.0051  Score=52.37  Aligned_cols=79  Identities=29%  Similarity=0.396  Sum_probs=51.9

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-HhcCCce-EE--cCCCCChhHHHHHHHHc--CCCcc
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTD-FV--NTSEHDRPIQEVIAEMT--NGGVD  241 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~~lg~~~-v~--~~~~~~~~~~~~i~~~~--~~~~d  241 (354)
                      .++++||+|+ |.+|...++.+...|+ +|++++++.++.+.+ ++++... ++  |..+. ..+.+.+.+..  .+++|
T Consensus        11 ~~k~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~-~~v~~~~~~~~~~~g~id   88 (265)
T 2o23_A           11 KGLVAVITGGASGLGLATAERLVGQGA-SAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSE-KDVQTALALAKGKFGRVD   88 (265)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECTTSSHHHHHHHHCTTEEEEECCTTCH-HHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCH-HHHHHHHHHHHHHCCCCC
Confidence            4688999987 9999999999888999 898898887765543 4455432 22  22221 12333232221  13799


Q ss_pred             EEEEcccC
Q 018529          242 RSVECTGN  249 (354)
Q Consensus       242 vv~d~~g~  249 (354)
                      ++|+++|.
T Consensus        89 ~li~~Ag~   96 (265)
T 2o23_A           89 VAVNCAGI   96 (265)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCcc
Confidence            99999873

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=96.68  E-value=0.0075  Score=51.82  Aligned_cols=78  Identities=32%  Similarity=0.431  Sum_probs=49.4

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH----HhcCCce-EE--cCCCCChhHHHHHHHHcC--C
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-FV--NTSEHDRPIQEVIAEMTN--G  238 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~----~~lg~~~-v~--~~~~~~~~~~~~i~~~~~--~  238 (354)
                      .++++||+|+ |.+|...+..+...|+ +|++++++.++.+.+    ++.+... .+  |..+. ..+.+.+.+...  +
T Consensus        33 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~g  110 (279)
T 3ctm_A           33 KGKVASVTGSSGGIGWAVAEAYAQAGA-DVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDP-KSVEETISQQEKDFG  110 (279)
T ss_dssp             TTCEEEETTTTSSHHHHHHHHHHHHTC-EEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCH-HHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCH-HHHHHHHHHHHHHhC
Confidence            4678999987 9999998888888899 888888877654433    2234322 22  22221 123333332211  3


Q ss_pred             CccEEEEccc
Q 018529          239 GVDRSVECTG  248 (354)
Q Consensus       239 ~~dvv~d~~g  248 (354)
                      .+|++|+++|
T Consensus       111 ~id~li~~Ag  120 (279)
T 3ctm_A          111 TIDVFVANAG  120 (279)
T ss_dssp             CCSEEEECGG
T ss_pred             CCCEEEECCc
Confidence            6999999887

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=96.66  E-value=0.0048  Score=52.41  Aligned_cols=79  Identities=23%  Similarity=0.373  Sum_probs=46.8

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-HhcCCc-eEE--cCCCCChhHHHHHHHHcC--CCcc
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVT-DFV--NTSEHDRPIQEVIAEMTN--GGVD  241 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~~lg~~-~v~--~~~~~~~~~~~~i~~~~~--~~~d  241 (354)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+ ++++.. ..+  |..+. .++.+.+++...  +++|
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~~~g~id   83 (257)
T 3tpc_A            6 KSRVFIVTGASSGLGAAVTRMLAQEGA-TVLGLDLKPPAGEEPAAELGAAVRFRNADVTNE-ADATAALAFAKQEFGHVH   83 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESSCC------------CEEEECCTTCH-HHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCCceEEEEccCCCH-HHHHHHHHHHHHHcCCCC
Confidence            4788999987 9999999998888999 899998888765543 344432 122  22221 122222322211  3799


Q ss_pred             EEEEcccC
Q 018529          242 RSVECTGN  249 (354)
Q Consensus       242 vv~d~~g~  249 (354)
                      ++++++|.
T Consensus        84 ~lv~nAg~   91 (257)
T 3tpc_A           84 GLVNCAGT   91 (257)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999874

>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*

Probab=96.66  E-value=0.004  Score=53.81  Aligned_cols=95  Identities=19%  Similarity=0.194  Sum_probs=65.0

Q ss_pred             CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhc-----C---------CceEEcCCCCChhHHHHHH
Q 018529          168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF-----G---------VTDFVNTSEHDRPIQEVIA  233 (354)
Q Consensus       168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~l-----g---------~~~v~~~~~~~~~~~~~i~  233 (354)
                      .++.+||++|+|. |..+..+++. +..+|++++.+++..+.+++.     +         ..++- ....+  ..+.+.
T Consensus        74 ~~~~~VLdiG~G~-G~~~~~l~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~-~~~~D--~~~~l~  148 (281)
T 1mjf_A           74 PKPKRVLVIGGGD-GGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAK-LTIGD--GFEFIK  148 (281)
T ss_dssp             SCCCEEEEEECTT-SHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEE-EEESC--HHHHHH
T ss_pred             CCCCeEEEEcCCc-CHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEE-EEECc--hHHHhc
Confidence            4568999999864 6777778877 766999999999998888763     2         11111 11112  444444


Q ss_pred             HHcCCCccEEEEccc----------ChHhHHHHHHHhhCCCceEEEE
Q 018529          234 EMTNGGVDRSVECTG----------NIDNMISAFECVHDGWGVAVLV  270 (354)
Q Consensus       234 ~~~~~~~dvv~d~~g----------~~~~~~~~~~~l~~~~g~~v~~  270 (354)
                      .  .+.+|+|+....          ..+.++.+.+.|+++ |.++..
T Consensus       149 ~--~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pg-G~lv~~  192 (281)
T 1mjf_A          149 N--NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNP-GIYVTQ  192 (281)
T ss_dssp             H--CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEE-EEEEEE
T ss_pred             c--cCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCC-cEEEEE
Confidence            4  458999985332          245688999999997 998875

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=96.66  E-value=0.0058  Score=52.68  Aligned_cols=80  Identities=21%  Similarity=0.335  Sum_probs=51.0

Q ss_pred             CCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH----HhcCCceE---EcCCCCChhHHHHHHHHcC--
Q 018529          168 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTDF---VNTSEHDRPIQEVIAEMTN--  237 (354)
Q Consensus       168 ~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~----~~lg~~~v---~~~~~~~~~~~~~i~~~~~--  237 (354)
                      ..++++||+|+ |++|.+.+..+...|+ +|+++++++++.+.+    ++.+....   .|..+. .++.+.+.+...  
T Consensus        22 ~~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~-~~v~~~~~~~~~~~   99 (279)
T 3sju_A           22 SRPQTAFVTGVSSGIGLAVARTLAARGI-AVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTST-DEVHAAVAAAVERF   99 (279)
T ss_dssp             ---CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCH-HHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCH-HHHHHHHHHHHHHc
Confidence            35789999987 9999998888888899 899999998876543    23344322   233222 122222222211  


Q ss_pred             CCccEEEEcccC
Q 018529          238 GGVDRSVECTGN  249 (354)
Q Consensus       238 ~~~dvv~d~~g~  249 (354)
                      +++|++++++|.
T Consensus       100 g~id~lv~nAg~  111 (279)
T 3sju_A          100 GPIGILVNSAGR  111 (279)
T ss_dssp             CSCCEEEECCCC
T ss_pred             CCCcEEEECCCC
Confidence            479999999874

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=96.65  E-value=0.0084  Score=51.48  Aligned_cols=78  Identities=27%  Similarity=0.313  Sum_probs=50.5

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh---cCCce-EE--cCCCCC--hhHHHHHHHHcCCC
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK---FGVTD-FV--NTSEHD--RPIQEVIAEMTNGG  239 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~---lg~~~-v~--~~~~~~--~~~~~~i~~~~~~~  239 (354)
                      .++++||+|+ |++|.+.++.+...|+ +|++++++++..+.+++   .+... .+  |..+.+  ..+.+.+.+.  ++
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~--g~  106 (273)
T 3uf0_A           30 AGRTAVVTGAGSGIGRAIAHGYARAGA-HVLAWGRTDGVKEVADEIADGGGSAEAVVADLADLEGAANVAEELAAT--RR  106 (273)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTHHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHH--SC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhc--CC
Confidence            4789999987 9999999988888999 88888877655554443   34322 22  222211  1122222222  47


Q ss_pred             ccEEEEcccC
Q 018529          240 VDRSVECTGN  249 (354)
Q Consensus       240 ~dvv~d~~g~  249 (354)
                      +|++++++|.
T Consensus       107 iD~lv~nAg~  116 (273)
T 3uf0_A          107 VDVLVNNAGI  116 (273)
T ss_dssp             CCEEEECCCC
T ss_pred             CcEEEECCCC
Confidence            9999999874

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=96.65  E-value=0.0095  Score=50.34  Aligned_cols=79  Identities=25%  Similarity=0.288  Sum_probs=52.2

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCce-EE--cCCCCC--hhHHHHHHHHcCC
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD-FV--NTSEHD--RPIQEVIAEMTNG  238 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~~-v~--~~~~~~--~~~~~~i~~~~~~  238 (354)
                      .++++||+|+ |++|...++.+...|+ +|+++++++++.+.+.+    .+... .+  |..+.+  +.+.+.+.+.. +
T Consensus         8 ~~k~vlITGas~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g   85 (253)
T 3qiv_A            8 ENKVGIVTGSGGGIGQAYAEALAREGA-AVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEF-G   85 (253)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH-S
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc-C
Confidence            4789999987 9999999998889999 89999999887665432    24322 22  222211  11222222222 3


Q ss_pred             CccEEEEcccC
Q 018529          239 GVDRSVECTGN  249 (354)
Q Consensus       239 ~~dvv~d~~g~  249 (354)
                      ++|++++++|.
T Consensus        86 ~id~li~~Ag~   96 (253)
T 3qiv_A           86 GIDYLVNNAAI   96 (253)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCc
Confidence            79999999875

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=96.65  E-value=0.0067  Score=51.45  Aligned_cols=78  Identities=27%  Similarity=0.351  Sum_probs=50.8

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH----HhcCCce-EE--cCCCCChhHHHHHHHHc--CC
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-FV--NTSEHDRPIQEVIAEMT--NG  238 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~----~~lg~~~-v~--~~~~~~~~~~~~i~~~~--~~  238 (354)
                      .++++||+|+ |.+|...+..+...|+ +|+++++++++.+.+    ++.+... .+  |..+. .++.+.+++..  .+
T Consensus        12 ~~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~   89 (260)
T 3awd_A           12 DNRVAIVTGGAQNIGLACVTALAEAGA-RVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNT-ESVQNAVRSVHEQEG   89 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCH-HHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCH-HHHHHHHHHHHHHcC
Confidence            4688999987 9999999998888999 899999988765433    2234322 22  22221 12333333221  13


Q ss_pred             CccEEEEccc
Q 018529          239 GVDRSVECTG  248 (354)
Q Consensus       239 ~~dvv~d~~g  248 (354)
                      ++|++++++|
T Consensus        90 ~id~vi~~Ag   99 (260)
T 3awd_A           90 RVDILVACAG   99 (260)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999987

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=96.64  E-value=0.0074  Score=52.03  Aligned_cols=80  Identities=21%  Similarity=0.300  Sum_probs=51.7

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh-c---CCceEEcCCC-CCh-hHHHHHHHHcC--CC
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-F---GVTDFVNTSE-HDR-PIQEVIAEMTN--GG  239 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~-l---g~~~v~~~~~-~~~-~~~~~i~~~~~--~~  239 (354)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.+ +   +....+..-+ .+. .+.+.+.+...  ++
T Consensus         7 ~gk~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   85 (280)
T 3tox_A            7 EGKIAIVTGASSGIGRAAALLFAREGA-KVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFGG   85 (280)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            4788999987 9999999988888999 89999999887665432 2   3322221111 121 12222222211  37


Q ss_pred             ccEEEEcccC
Q 018529          240 VDRSVECTGN  249 (354)
Q Consensus       240 ~dvv~d~~g~  249 (354)
                      +|++++++|.
T Consensus        86 iD~lvnnAg~   95 (280)
T 3tox_A           86 LDTAFNNAGA   95 (280)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999883

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=96.64  E-value=0.013  Score=52.59  Aligned_cols=92  Identities=17%  Similarity=0.171  Sum_probs=64.0

Q ss_pred             eEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcccChH
Q 018529          172 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNID  251 (354)
Q Consensus       172 ~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~~~  251 (354)
                      +|+|+|+|.+|...++.+.. .. .|.+.+++.++.+.+++......+|..+    . +.+.++.. ++|+|+++++...
T Consensus        18 kilvlGaG~vG~~~~~~L~~-~~-~v~~~~~~~~~~~~~~~~~~~~~~d~~d----~-~~l~~~~~-~~DvVi~~~p~~~   89 (365)
T 3abi_A           18 KVLILGAGNIGRAIAWDLKD-EF-DVYIGDVNNENLEKVKEFATPLKVDASN----F-DKLVEVMK-EFELVIGALPGFL   89 (365)
T ss_dssp             EEEEECCSHHHHHHHHHHTT-TS-EEEEEESCHHHHHHHTTTSEEEECCTTC----H-HHHHHHHT-TCSEEEECCCGGG
T ss_pred             EEEEECCCHHHHHHHHHHhc-CC-CeEEEEcCHHHHHHHhccCCcEEEecCC----H-HHHHHHHh-CCCEEEEecCCcc
Confidence            69999999999988877654 34 7888889999998887654333333332    1 23333332 5899999998755


Q ss_pred             hHHHHHHHhhCCCceEEEEcC
Q 018529          252 NMISAFECVHDGWGVAVLVGV  272 (354)
Q Consensus       252 ~~~~~~~~l~~~~g~~v~~g~  272 (354)
                      ....+-.|+..+ -.++.+..
T Consensus        90 ~~~v~~~~~~~g-~~yvD~s~  109 (365)
T 3abi_A           90 GFKSIKAAIKSK-VDMVDVSF  109 (365)
T ss_dssp             HHHHHHHHHHHT-CEEEECCC
T ss_pred             cchHHHHHHhcC-cceEeeec
Confidence            566667778775 66776553

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=96.63  E-value=0.0063  Score=52.86  Aligned_cols=79  Identities=22%  Similarity=0.244  Sum_probs=51.2

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-Hh---cCCce--EE--cCCCCChhHHHHHHHHc--C
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KK---FGVTD--FV--NTSEHDRPIQEVIAEMT--N  237 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~~---lg~~~--v~--~~~~~~~~~~~~i~~~~--~  237 (354)
                      .++++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+ ++   .+...  .+  |..+. .++.+.+.+..  .
T Consensus        40 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~-~~v~~~~~~~~~~~  117 (293)
T 3rih_A           40 SARSVLVTGGTKGIGRGIATVFARAGA-NVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDP-GSCADAARTVVDAF  117 (293)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCH-HHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCH-HHHHHHHHHHHHHc
Confidence            5788999987 9999999998889999 899999988775543 22   33112  22  33222 12222222221  1


Q ss_pred             CCccEEEEcccC
Q 018529          238 GGVDRSVECTGN  249 (354)
Q Consensus       238 ~~~dvv~d~~g~  249 (354)
                      +++|++++++|.
T Consensus       118 g~iD~lvnnAg~  129 (293)
T 3rih_A          118 GALDVVCANAGI  129 (293)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999874

>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7

Probab=96.63  E-value=0.0027  Score=52.84  Aligned_cols=98  Identities=16%  Similarity=0.183  Sum_probs=67.9

Q ss_pred             CCCCCCeEEEEcCChhHHHHHHHHHHcCC------cEEEEEcCChhhHHHHHhc----C-----CceEEcCCCCChhHHH
Q 018529          166 KPERGSSVAVFGLGAVGLAAAEGARIAGA------SRIIGVDRSSKRFEEAKKF----G-----VTDFVNTSEHDRPIQE  230 (354)
Q Consensus       166 ~~~~~~~vlI~G~g~~G~~a~~~a~~~g~------~~vi~v~~~~~~~~~~~~l----g-----~~~v~~~~~~~~~~~~  230 (354)
                      .++++++||-+|+|. |..+..+++..+.      .+|++++.+++..+.+++.    +     ...+... ..+  ..+
T Consensus        81 ~~~~~~~VLdiG~G~-G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~-~~d--~~~  156 (227)
T 1r18_A           81 HLKPGARILDVGSGS-GYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIV-EGD--GRK  156 (227)
T ss_dssp             TCCTTCEEEEESCTT-SHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEE-ESC--GGG
T ss_pred             hCCCCCEEEEECCCc-cHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEE-ECC--ccc
Confidence            578999999999986 8888889887762      3899999999888777542    2     1111111 111  111


Q ss_pred             HHHHHcC-CCccEEEEcccChHhHHHHHHHhhCCCceEEEEc
Q 018529          231 VIAEMTN-GGVDRSVECTGNIDNMISAFECVHDGWGVAVLVG  271 (354)
Q Consensus       231 ~i~~~~~-~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g  271 (354)
                         .+.. +.||+|+.........+.+.+.|+++ |++++.-
T Consensus       157 ---~~~~~~~fD~I~~~~~~~~~~~~~~~~Lkpg-G~lvi~~  194 (227)
T 1r18_A          157 ---GYPPNAPYNAIHVGAAAPDTPTELINQLASG-GRLIVPV  194 (227)
T ss_dssp             ---CCGGGCSEEEEEECSCBSSCCHHHHHTEEEE-EEEEEEE
T ss_pred             ---CCCcCCCccEEEECCchHHHHHHHHHHhcCC-CEEEEEE
Confidence               1112 47999998876656778899999997 9877653

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=96.63  E-value=0.0073  Score=51.95  Aligned_cols=79  Identities=22%  Similarity=0.297  Sum_probs=51.6

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH----HhcCCce-EE--cCCCCChhHHHHHHHHc--CC
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-FV--NTSEHDRPIQEVIAEMT--NG  238 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~----~~lg~~~-v~--~~~~~~~~~~~~i~~~~--~~  238 (354)
                      .++++||+|+ |++|...+..+...|+ +|+++++++++.+.+    ++.+... .+  |..+. .++.+.+.+..  -+
T Consensus        21 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~~~g   98 (277)
T 2rhc_B           21 DSEVALVTGATSGIGLEIARRLGKEGL-RVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSV-PEIEALVAAVVERYG   98 (277)
T ss_dssp             TSCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCH-HHHHHHHHHHHHHTC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCH-HHHHHHHHHHHHHhC
Confidence            4688999987 9999999998888999 899999988765543    2234332 22  32221 12222222221  24


Q ss_pred             CccEEEEcccC
Q 018529          239 GVDRSVECTGN  249 (354)
Q Consensus       239 ~~dvv~d~~g~  249 (354)
                      ++|++++++|.
T Consensus        99 ~iD~lv~~Ag~  109 (277)
T 2rhc_B           99 PVDVLVNNAGR  109 (277)
T ss_dssp             SCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999873

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=96.62  E-value=0.013  Score=49.08  Aligned_cols=78  Identities=19%  Similarity=0.207  Sum_probs=49.0

Q ss_pred             CCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEE-cCChhhHHHH----HhcCCce-E-E--cCCCCChhHHHHHHHHc--C
Q 018529          170 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGV-DRSSKRFEEA----KKFGVTD-F-V--NTSEHDRPIQEVIAEMT--N  237 (354)
Q Consensus       170 ~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v-~~~~~~~~~~----~~lg~~~-v-~--~~~~~~~~~~~~i~~~~--~  237 (354)
                      ++++||+|+ |.+|...++.+...|+ +|+++ ++++++.+.+    ++.+... . +  |..+. ..+.+.+.+..  -
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~   78 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGF-ALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEA-EAATALVHQAAEVL   78 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTC-EEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSH-HHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCH-HHHHHHHHHHHHhc
Confidence            357899987 9999999988888999 78877 7887765543    2234322 2 2  32221 12222222221  1


Q ss_pred             CCccEEEEcccC
Q 018529          238 GGVDRSVECTGN  249 (354)
Q Consensus       238 ~~~dvv~d~~g~  249 (354)
                      +++|++|+++|.
T Consensus        79 ~~~d~li~~Ag~   90 (245)
T 2ph3_A           79 GGLDTLVNNAGI   90 (245)
T ss_dssp             TCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999873

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=96.62  E-value=0.0032  Score=53.04  Aligned_cols=75  Identities=23%  Similarity=0.284  Sum_probs=52.6

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCCh--hhHHHHHhcCCceE---EcCCCCChhHHHHHHHHc-CCCcc
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS--KRFEEAKKFGVTDF---VNTSEHDRPIQEVIAEMT-NGGVD  241 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~--~~~~~~~~lg~~~v---~~~~~~~~~~~~~i~~~~-~~~~d  241 (354)
                      .|+++||+|+ +++|.+.++.+-..|+ +|+.+++++  +..+.+++.|....   .|..+..     .+++.. .+++|
T Consensus         8 ~GKvalVTGas~GIG~aiA~~la~~Ga-~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d~~-----~v~~~~~~g~iD   81 (247)
T 4hp8_A            8 EGRKALVTGANTGLGQAIAVGLAAAGA-EVVCAARRAPDETLDIIAKDGGNASALLIDFADPL-----AAKDSFTDAGFD   81 (247)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCCHHHHHHHHHTTCCEEEEECCTTSTT-----TTTTSSTTTCCC
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHcCC-EEEEEeCCcHHHHHHHHHHhCCcEEEEEccCCCHH-----HHHHHHHhCCCC
Confidence            4788999987 9999999999999999 888888874  44556667776432   2333322     122222 24899


Q ss_pred             EEEEcccC
Q 018529          242 RSVECTGN  249 (354)
Q Consensus       242 vv~d~~g~  249 (354)
                      +.++++|.
T Consensus        82 iLVNNAGi   89 (247)
T 4hp8_A           82 ILVNNAGI   89 (247)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999885

>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A

Probab=96.62  E-value=0.0084  Score=53.07  Aligned_cols=99  Identities=20%  Similarity=0.164  Sum_probs=67.0

Q ss_pred             CCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhc------CC--ceEEcCCCCChhHHHHHHHHcCC
Q 018529          167 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF------GV--TDFVNTSEHDRPIQEVIAEMTNG  238 (354)
Q Consensus       167 ~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~l------g~--~~v~~~~~~~~~~~~~i~~~~~~  238 (354)
                      ..++.+||++|+|. |..+..+++..+..+|++++.+++..+.+++.      |.  .++- ....+  ..+.+.....+
T Consensus       118 ~~~~~~VLdIG~G~-G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~-~~~~D--~~~~l~~~~~~  193 (334)
T 1xj5_A          118 IPNPKKVLVIGGGD-GGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVN-LVIGD--GVAFLKNAAEG  193 (334)
T ss_dssp             SSCCCEEEEETCSS-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEE-EEESC--HHHHHHTSCTT
T ss_pred             CCCCCEEEEECCCc-cHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEE-EEECC--HHHHHHhccCC
Confidence            45678999999864 67777888876545999999999988888763      11  1121 11122  44444443334


Q ss_pred             CccEEEEccc----------ChHhHHHHHHHhhCCCceEEEE
Q 018529          239 GVDRSVECTG----------NIDNMISAFECVHDGWGVAVLV  270 (354)
Q Consensus       239 ~~dvv~d~~g----------~~~~~~~~~~~l~~~~g~~v~~  270 (354)
                      .||+|+....          ....++.+.+.|+++ |.+++.
T Consensus       194 ~fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~Lkpg-G~lv~~  234 (334)
T 1xj5_A          194 SYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPG-GVVCTQ  234 (334)
T ss_dssp             CEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEE-EEEEEE
T ss_pred             CccEEEECCCCccCcchhhhHHHHHHHHHHhcCCC-cEEEEe
Confidence            7999985322          246788999999997 998876

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=96.62  E-value=0.0071  Score=51.63  Aligned_cols=79  Identities=23%  Similarity=0.215  Sum_probs=51.7

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh-----cCCc--eE--EcCCCCC--hhHHHHHHHHc
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-----FGVT--DF--VNTSEHD--RPIQEVIAEMT  236 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~-----lg~~--~v--~~~~~~~--~~~~~~i~~~~  236 (354)
                      .++++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+.+     .+..  ..  .|..+.+  ..+.+.+.+..
T Consensus         7 ~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   85 (265)
T 3lf2_A            7 SEAVAVVTGGSSGIGLATVELLLEAGA-AVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTL   85 (265)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            4788999987 9999999988888999 89999999877654422     3322  12  2332221  11222222222


Q ss_pred             CCCccEEEEcccC
Q 018529          237 NGGVDRSVECTGN  249 (354)
Q Consensus       237 ~~~~dvv~d~~g~  249 (354)
                       +++|++++++|.
T Consensus        86 -g~id~lvnnAg~   97 (265)
T 3lf2_A           86 -GCASILVNNAGQ   97 (265)
T ss_dssp             -CSCSEEEECCCC
T ss_pred             -CCCCEEEECCCC
Confidence             479999999884

>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}

Probab=96.61  E-value=0.0032  Score=56.51  Aligned_cols=134  Identities=18%  Similarity=0.160  Sum_probs=83.3

Q ss_pred             CeEEEEcCChhHHHHHHHHHHc-CCcEEE-EEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEccc
Q 018529          171 SSVAVFGLGAVGLAAAEGARIA-GASRII-GVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  248 (354)
Q Consensus       171 ~~vlI~G~g~~G~~a~~~a~~~-g~~~vi-~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g  248 (354)
                      -+|.|+|+|.+|...+..++.. +. .++ +.++++++.+.++++|+..   +.+    +.+.+.+   ..+|+|+.|++
T Consensus         6 ~~vgiiG~G~~g~~~~~~l~~~~~~-~l~av~d~~~~~~~~a~~~g~~~---~~~----~~~ll~~---~~~D~V~i~tp   74 (359)
T 3e18_A            6 YQLVIVGYGGMGSYHVTLASAADNL-EVHGVFDILAEKREAAAQKGLKI---YES----YEAVLAD---EKVDAVLIATP   74 (359)
T ss_dssp             EEEEEECCSHHHHHHHHHHHTSTTE-EEEEEECSSHHHHHHHHTTTCCB---CSC----HHHHHHC---TTCCEEEECSC
T ss_pred             CcEEEECcCHHHHHHHHHHHhCCCc-EEEEEEcCCHHHHHHHHhcCCce---eCC----HHHHhcC---CCCCEEEEcCC
Confidence            3688999999999888777766 56 555 4578888888888788631   222    4443332   36999999999


Q ss_pred             ChHhHHHHHHHhhCCCceEEEEcCCCCCceeecc-hhhhc--cccEEEEEeccCCCCCCCHHHHHHHHHccCCC
Q 018529          249 NIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTK-PINVL--NERTLKGTFFGNYKPRTDLPSVVDMYMNKQLE  319 (354)
Q Consensus       249 ~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~-~~~~~--~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~  319 (354)
                      .....+.+..++..  |+-|++..+.....-... .....  +++.+.-.+  +.+....++.+.+++.+|.+.
T Consensus        75 ~~~h~~~~~~al~a--GkhVl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~--~~r~~p~~~~~k~~i~~g~iG  144 (359)
T 3e18_A           75 NDSHKELAISALEA--GKHVVCEKPVTMTSEDLLAIMDVAKRVNKHFMVHQ--NRRWDEDFLIIKEMFEQKTIG  144 (359)
T ss_dssp             GGGHHHHHHHHHHT--TCEEEEESSCCSSHHHHHHHHHHHHHHTCCEEEEC--GGGGCHHHHHHHHHHHHTTTS
T ss_pred             cHHHHHHHHHHHHC--CCCEEeeCCCcCCHHHHHHHHHHHHHhCCeEEEEe--eeccCHHHHHHHHHHHcCCCC
Confidence            87788888888887  566777654311110100 11111  233332222  122224577888888888653

>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}

Probab=96.60  E-value=0.0053  Score=51.52  Aligned_cols=103  Identities=17%  Similarity=0.162  Sum_probs=68.2

Q ss_pred             CCCCCCeEEEEcCChhHHHHHHHHHHcC-CcEEEEEcCChhhHHHHHh----cCCceEEcCCCCChhHHHHHHHHc----
Q 018529          166 KPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMT----  236 (354)
Q Consensus       166 ~~~~~~~vlI~G~g~~G~~a~~~a~~~g-~~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~~~----  236 (354)
                      ...++++||-+|+| .|..++.+|+.+. ..+|++++.+++..+.+++    .|...-+.....+  ..+.+..+.    
T Consensus        67 ~~~~~~~VLeiG~G-~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd--a~~~l~~l~~~~~  143 (237)
T 3c3y_A           67 KLVNAKKTIEVGVF-TGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESD--AMLALDNLLQGQE  143 (237)
T ss_dssp             HHTTCCEEEEECCT-TSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESC--HHHHHHHHHHSTT
T ss_pred             HhhCCCEEEEeCCC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcC--HHHHHHHHHhccC
Confidence            34567899999987 4788888998863 2399999999998887754    4553211111222  444444432    


Q ss_pred             -CCCccEEEEcccC---hHhHHHHHHHhhCCCceEEEEcC
Q 018529          237 -NGGVDRSVECTGN---IDNMISAFECVHDGWGVAVLVGV  272 (354)
Q Consensus       237 -~~~~dvv~d~~g~---~~~~~~~~~~l~~~~g~~v~~g~  272 (354)
                       .+.||+||-....   ...++.+.+.|+++ |.++.-..
T Consensus       144 ~~~~fD~I~~d~~~~~~~~~l~~~~~~L~pG-G~lv~d~~  182 (237)
T 3c3y_A          144 SEGSYDFGFVDADKPNYIKYHERLMKLVKVG-GIVAYDNT  182 (237)
T ss_dssp             CTTCEEEEEECSCGGGHHHHHHHHHHHEEEE-EEEEEECT
T ss_pred             CCCCcCEEEECCchHHHHHHHHHHHHhcCCC-eEEEEecC
Confidence             3479999854432   35678889999997 98876543

>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7

Probab=96.60  E-value=0.0048  Score=51.38  Aligned_cols=101  Identities=20%  Similarity=0.234  Sum_probs=69.8

Q ss_pred             hhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCC---c-eEEcCCCCChhHHHHHHHHc
Q 018529          161 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV---T-DFVNTSEHDRPIQEVIAEMT  236 (354)
Q Consensus       161 l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~---~-~v~~~~~~~~~~~~~i~~~~  236 (354)
                      +.....++++++||-+|+|. |..+..+++.. . +|++++.+++..+.+++...   . .++.. +    +.+.+.  .
T Consensus        62 ~~~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~-~-~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~-d----~~~~~~--~  131 (231)
T 1vbf_A           62 MLDELDLHKGQKVLEIGTGI-GYYTALIAEIV-D-KVVSVEINEKMYNYASKLLSYYNNIKLILG-D----GTLGYE--E  131 (231)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHS-S-EEEEEESCHHHHHHHHHHHTTCSSEEEEES-C----GGGCCG--G
T ss_pred             HHHhcCCCCCCEEEEEcCCC-CHHHHHHHHHc-C-EEEEEeCCHHHHHHHHHHHhhcCCeEEEEC-C----cccccc--c
Confidence            34556788999999999986 88888888874 4 99999999999888876321   1 12211 1    111010  1


Q ss_pred             CCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcC
Q 018529          237 NGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGV  272 (354)
Q Consensus       237 ~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~  272 (354)
                      .+.+|+|+....-......+.+.|+++ |++++.-.
T Consensus       132 ~~~fD~v~~~~~~~~~~~~~~~~L~pg-G~l~~~~~  166 (231)
T 1vbf_A          132 EKPYDRVVVWATAPTLLCKPYEQLKEG-GIMILPIG  166 (231)
T ss_dssp             GCCEEEEEESSBBSSCCHHHHHTEEEE-EEEEEEEC
T ss_pred             CCCccEEEECCcHHHHHHHHHHHcCCC-cEEEEEEc
Confidence            247999998765545567888999997 99887644

>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0

Probab=96.60  E-value=0.003  Score=52.44  Aligned_cols=103  Identities=17%  Similarity=0.137  Sum_probs=68.6

Q ss_pred             CCCCCCeEEEEcCChhHHHHHHHHHHcC-CcEEEEEcCChhhHHHHHh----cCCceEEcCCCCChhHHHHHHHHcC---
Q 018529          166 KPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTN---  237 (354)
Q Consensus       166 ~~~~~~~vlI~G~g~~G~~a~~~a~~~g-~~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~~~~---  237 (354)
                      ...++.+||-+|+|. |..++.+++.++ ..+|++++.+++..+.+++    .|...-+.....+  ..+.+.....   
T Consensus        61 ~~~~~~~vLdiG~G~-G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d--~~~~~~~~~~~~~  137 (225)
T 3tr6_A           61 KLMQAKKVIDIGTFT-GYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSP--AKDTLAELIHAGQ  137 (225)
T ss_dssp             HHHTCSEEEEECCTT-SHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESC--HHHHHHHHHTTTC
T ss_pred             HhhCCCEEEEeCCcc-hHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCC--HHHHHHHhhhccC
Confidence            445778999999875 888889998864 3499999999988877755    3543211111222  4344444332   


Q ss_pred             -CCccEEEEcccC---hHhHHHHHHHhhCCCceEEEEcC
Q 018529          238 -GGVDRSVECTGN---IDNMISAFECVHDGWGVAVLVGV  272 (354)
Q Consensus       238 -~~~dvv~d~~g~---~~~~~~~~~~l~~~~g~~v~~g~  272 (354)
                       +.||+||.....   ...++.+.+.|+++ |.+++-..
T Consensus       138 ~~~fD~v~~~~~~~~~~~~l~~~~~~L~pg-G~lv~~~~  175 (225)
T 3tr6_A          138 AWQYDLIYIDADKANTDLYYEESLKLLREG-GLIAVDNV  175 (225)
T ss_dssp             TTCEEEEEECSCGGGHHHHHHHHHHHEEEE-EEEEEECS
T ss_pred             CCCccEEEECCCHHHHHHHHHHHHHhcCCC-cEEEEeCC
Confidence             479999854332   34578888999997 99886543

>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*

Probab=96.59  E-value=0.0047  Score=51.25  Aligned_cols=100  Identities=16%  Similarity=0.139  Sum_probs=68.4

Q ss_pred             CCCCCCeEEEEcCChhHHHHHHHHHHcCCc-EEEEEcCChhhHHHHHh----cC-----CceEEcCCCCChhHHHHHHHH
Q 018529          166 KPERGSSVAVFGLGAVGLAAAEGARIAGAS-RIIGVDRSSKRFEEAKK----FG-----VTDFVNTSEHDRPIQEVIAEM  235 (354)
Q Consensus       166 ~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~-~vi~v~~~~~~~~~~~~----lg-----~~~v~~~~~~~~~~~~~i~~~  235 (354)
                      .++++++||-+|+|. |..+..+++..|.. +|++++.+++..+.+++    .|     ...+-.. ..+  ..+..  .
T Consensus        74 ~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~-~~d--~~~~~--~  147 (226)
T 1i1n_A           74 QLHEGAKALDVGSGS-GILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLV-VGD--GRMGY--A  147 (226)
T ss_dssp             TSCTTCEEEEETCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEE-ESC--GGGCC--G
T ss_pred             hCCCCCEEEEEcCCc-CHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEE-ECC--cccCc--c
Confidence            378999999999985 88888999887632 99999999988887754    22     1121111 111  11000  1


Q ss_pred             cCCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcC
Q 018529          236 TNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGV  272 (354)
Q Consensus       236 ~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~  272 (354)
                      ..+.||+|+........+..+.+.|+++ |++++.-.
T Consensus       148 ~~~~fD~i~~~~~~~~~~~~~~~~Lkpg-G~lv~~~~  183 (226)
T 1i1n_A          148 EEAPYDAIHVGAAAPVVPQALIDQLKPG-GRLILPVG  183 (226)
T ss_dssp             GGCCEEEEEECSBBSSCCHHHHHTEEEE-EEEEEEES
T ss_pred             cCCCcCEEEECCchHHHHHHHHHhcCCC-cEEEEEEe
Confidence            1237999998776656778999999997 99877543

>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*

Probab=96.59  E-value=0.012  Score=51.41  Aligned_cols=101  Identities=17%  Similarity=0.150  Sum_probs=70.0

Q ss_pred             hhhcC-CCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCc---eEEcCCCCChhHHHHHH
Q 018529          162 LNVAK-PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT---DFVNTSEHDRPIQEVIA  233 (354)
Q Consensus       162 ~~~~~-~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~---~v~~~~~~~~~~~~~i~  233 (354)
                      .+... ++++++||-+|+|. |..+..+++..|. +|++++.+++..+.+++    .|..   .++..+-.+  +     
T Consensus       109 ~~~l~~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~--~-----  179 (312)
T 3vc1_A          109 MDHLGQAGPDDTLVDAGCGR-GGSMVMAHRRFGS-RVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLD--T-----  179 (312)
T ss_dssp             HTTSCCCCTTCEEEEESCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTS--C-----
T ss_pred             HHHhccCCCCCEEEEecCCC-CHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhc--C-----
Confidence            34444 78999999999975 8888888888787 99999999998887765    3432   122111111  0     


Q ss_pred             HHcCCCccEEEEc-----ccChHhHHHHHHHhhCCCceEEEEcC
Q 018529          234 EMTNGGVDRSVEC-----TGNIDNMISAFECVHDGWGVAVLVGV  272 (354)
Q Consensus       234 ~~~~~~~dvv~d~-----~g~~~~~~~~~~~l~~~~g~~v~~g~  272 (354)
                      .+..+.||+|+..     .+....+..+.+.|+++ |++++...
T Consensus       180 ~~~~~~fD~V~~~~~l~~~~~~~~l~~~~~~Lkpg-G~l~~~~~  222 (312)
T 3vc1_A          180 PFDKGAVTASWNNESTMYVDLHDLFSEHSRFLKVG-GRYVTITG  222 (312)
T ss_dssp             CCCTTCEEEEEEESCGGGSCHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             CCCCCCEeEEEECCchhhCCHHHHHHHHHHHcCCC-cEEEEEEc
Confidence            0122479999863     22346788999999997 99987753

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=96.59  E-value=0.021  Score=47.95  Aligned_cols=79  Identities=20%  Similarity=0.270  Sum_probs=47.7

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEE-cCChhhHHHH----HhcCCce-EE--cCCCCChhHHHHHHHHc--C
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGV-DRSSKRFEEA----KKFGVTD-FV--NTSEHDRPIQEVIAEMT--N  237 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v-~~~~~~~~~~----~~lg~~~-v~--~~~~~~~~~~~~i~~~~--~  237 (354)
                      +++++||+|+ |.+|...++.+...|+ +|+++ .+++++.+.+    ++.+... .+  |..+. ..+.+.+++..  .
T Consensus         4 ~~~~vlItGasggiG~~~a~~l~~~G~-~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~   81 (247)
T 2hq1_A            4 KGKTAIVTGSSRGLGKAIAWKLGNMGA-NIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNP-EDVENMVKTAMDAF   81 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSH-HHHHHHHHHHHHHH
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCH-HHHHHHHHHHHHhc
Confidence            4678999987 9999999998888999 78887 5665554332    3334332 22  22221 12222232221  1


Q ss_pred             CCccEEEEcccC
Q 018529          238 GGVDRSVECTGN  249 (354)
Q Consensus       238 ~~~dvv~d~~g~  249 (354)
                      +++|++|+++|.
T Consensus        82 ~~~d~vi~~Ag~   93 (247)
T 2hq1_A           82 GRIDILVNNAGI   93 (247)
T ss_dssp             SCCCEEEECC--
T ss_pred             CCCCEEEECCCC
Confidence            379999999874

>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}

Probab=96.59  E-value=0.012  Score=49.32  Aligned_cols=95  Identities=15%  Similarity=0.122  Sum_probs=66.3

Q ss_pred             CCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEE
Q 018529          166 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVE  245 (354)
Q Consensus       166 ~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d  245 (354)
                      .++++.+||=+|+|. |..+..+++. |. +|++++.+++..+.+++. . .++   ..+  ..+.+..+..+.||+|+.
T Consensus        38 ~~~~~~~vLDiGcG~-G~~~~~l~~~-~~-~v~gvD~s~~~~~~a~~~-~-~~~---~~d--~~~~~~~~~~~~fD~i~~  107 (240)
T 3dli_A           38 YFKGCRRVLDIGCGR-GEFLELCKEE-GI-ESIGVDINEDMIKFCEGK-F-NVV---KSD--AIEYLKSLPDKYLDGVMI  107 (240)
T ss_dssp             GTTTCSCEEEETCTT-THHHHHHHHH-TC-CEEEECSCHHHHHHHHTT-S-EEE---CSC--HHHHHHTSCTTCBSEEEE
T ss_pred             hhcCCCeEEEEeCCC-CHHHHHHHhC-CC-cEEEEECCHHHHHHHHhh-c-cee---ecc--HHHHhhhcCCCCeeEEEE
Confidence            467889999999864 5566666665 77 899999999999998876 2 222   122  333333444458999987


Q ss_pred             cc-----cC---hHhHHHHHHHhhCCCceEEEEc
Q 018529          246 CT-----GN---IDNMISAFECVHDGWGVAVLVG  271 (354)
Q Consensus       246 ~~-----g~---~~~~~~~~~~l~~~~g~~v~~g  271 (354)
                      ..     +.   ...+..+.+.|+++ |++++..
T Consensus       108 ~~~l~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~  140 (240)
T 3dli_A          108 SHFVEHLDPERLFELLSLCYSKMKYS-SYIVIES  140 (240)
T ss_dssp             ESCGGGSCGGGHHHHHHHHHHHBCTT-CCEEEEE
T ss_pred             CCchhhCCcHHHHHHHHHHHHHcCCC-cEEEEEe
Confidence            32     21   35678889999997 9987654

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=96.59  E-value=0.009  Score=49.23  Aligned_cols=96  Identities=15%  Similarity=0.174  Sum_probs=61.0

Q ss_pred             eEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcccCh
Q 018529          172 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI  250 (354)
Q Consensus       172 ~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~~  250 (354)
                      +|||+|+ |.+|...++.+...|. +|+++++++++.+.+  .++ .++..+-.+  ..+.+.+... ++|+||.++|..
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~--~~~-~~~~~D~~d--~~~~~~~~~~-~~d~vi~~ag~~   74 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDY-QIYAGARKVEQVPQY--NNV-KAVHFDVDW--TPEEMAKQLH-GMDAIINVSGSG   74 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSC-EEEEEESSGGGSCCC--TTE-EEEECCTTS--CHHHHHTTTT-TCSEEEECCCCT
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCccchhhc--CCc-eEEEecccC--CHHHHHHHHc-CCCEEEECCcCC
Confidence            5899997 9999999999998998 999999988765432  122 222221111  1234554433 699999999853


Q ss_pred             H---------hHHHHHHHhhCC-CceEEEEcCCC
Q 018529          251 D---------NMISAFECVHDG-WGVAVLVGVPS  274 (354)
Q Consensus       251 ~---------~~~~~~~~l~~~-~g~~v~~g~~~  274 (354)
                      .         ....+++.+... .+++++++...
T Consensus        75 ~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~  108 (219)
T 3dqp_A           75 GKSLLKVDLYGAVKLMQAAEKAEVKRFILLSTIF  108 (219)
T ss_dssp             TSSCCCCCCHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred             CCCcEeEeHHHHHHHHHHHHHhCCCEEEEECccc
Confidence            2         123344444332 25899888754

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=96.58  E-value=0.0036  Score=53.41  Aligned_cols=80  Identities=14%  Similarity=0.235  Sum_probs=51.2

Q ss_pred             CCCCeEEEEcC-ChhHHHHHHHHHHcC---CcEEEEEcCChhhHHHHHhc---CCc-eE--EcCCCCChhHHHH---HHH
Q 018529          168 ERGSSVAVFGL-GAVGLAAAEGARIAG---ASRIIGVDRSSKRFEEAKKF---GVT-DF--VNTSEHDRPIQEV---IAE  234 (354)
Q Consensus       168 ~~~~~vlI~G~-g~~G~~a~~~a~~~g---~~~vi~v~~~~~~~~~~~~l---g~~-~v--~~~~~~~~~~~~~---i~~  234 (354)
                      .++.++||+|+ |.+|...++.+...|   + +|++++++.++.+.++++   +.. .+  .|..+.+ .+.+.   +.+
T Consensus        19 ~~~k~vlITGasggIG~~la~~L~~~G~~~~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~-~v~~~~~~~~~   96 (267)
T 1sny_A           19 SHMNSILITGCNRGLGLGLVKALLNLPQPPQ-HLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFD-AYDKLVADIEG   96 (267)
T ss_dssp             -CCSEEEESCCSSHHHHHHHHHHHTSSSCCS-EEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGG-GHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHhcCCCCc-EEEEEecChhhhHHHHHhhccCCceEEEEecCCChH-HHHHHHHHHHH
Confidence            45678999987 999999998888888   7 899998887655444332   322 22  2333322 23333   333


Q ss_pred             HcCC-CccEEEEcccC
Q 018529          235 MTNG-GVDRSVECTGN  249 (354)
Q Consensus       235 ~~~~-~~dvv~d~~g~  249 (354)
                      ..+. ++|++|+++|.
T Consensus        97 ~~g~~~id~li~~Ag~  112 (267)
T 1sny_A           97 VTKDQGLNVLFNNAGI  112 (267)
T ss_dssp             HHGGGCCSEEEECCCC
T ss_pred             hcCCCCccEEEECCCc
Confidence            2222 59999999873

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=96.58  E-value=0.006  Score=51.90  Aligned_cols=79  Identities=19%  Similarity=0.244  Sum_probs=51.1

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH----HhcCCce-EE--cCCCCChhHHHHHHHHc--CC
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-FV--NTSEHDRPIQEVIAEMT--NG  238 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~----~~lg~~~-v~--~~~~~~~~~~~~i~~~~--~~  238 (354)
                      .++++||+|+ |.+|...+..+...|+ +|+++++++++.+.+    ++.+... .+  |..+. .++.+.+.+..  .+
T Consensus        13 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~g   90 (260)
T 2zat_A           13 ENKVALVTASTDGIGLAIARRLAQDGA-HVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKA-EDRERLVAMAVNLHG   90 (260)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCH-HHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCH-HHHHHHHHHHHHHcC
Confidence            4788999987 9999999998888999 899999988765433    2234322 12  22221 12222222221  14


Q ss_pred             CccEEEEcccC
Q 018529          239 GVDRSVECTGN  249 (354)
Q Consensus       239 ~~dvv~d~~g~  249 (354)
                      ++|++++++|.
T Consensus        91 ~iD~lv~~Ag~  101 (260)
T 2zat_A           91 GVDILVSNAAV  101 (260)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999873

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=96.58  E-value=0.0066  Score=51.73  Aligned_cols=80  Identities=21%  Similarity=0.188  Sum_probs=51.5

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH----HhcCCce-EEcCCCCC-hhHH---HHHHHHcCC
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-FVNTSEHD-RPIQ---EVIAEMTNG  238 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~----~~lg~~~-v~~~~~~~-~~~~---~~i~~~~~~  238 (354)
                      .++++||+|+ |.+|...+..+...|+ +|+++++++++.+.+    ++.+... .+..+-.+ ..+.   +.+.+...+
T Consensus        13 ~~k~vlITGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   91 (266)
T 1xq1_A           13 KAKTVLVTGGTKGIGHAIVEEFAGFGA-VIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGG   91 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            4678999987 9999999998888999 899999988765543    2234322 22222122 1122   222222225


Q ss_pred             CccEEEEcccC
Q 018529          239 GVDRSVECTGN  249 (354)
Q Consensus       239 ~~dvv~d~~g~  249 (354)
                      ++|++|+++|.
T Consensus        92 ~id~li~~Ag~  102 (266)
T 1xq1_A           92 KLDILINNLGA  102 (266)
T ss_dssp             CCSEEEEECCC
T ss_pred             CCcEEEECCCC
Confidence            79999999874

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=96.57  E-value=0.0095  Score=51.03  Aligned_cols=70  Identities=17%  Similarity=0.166  Sum_probs=51.4

Q ss_pred             CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-HhcCC--ceEEcCCCCChhHHHHHHHHcCCCccEEEE
Q 018529          169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGV--TDFVNTSEHDRPIQEVIAEMTNGGVDRSVE  245 (354)
Q Consensus       169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~~lg~--~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d  245 (354)
                      .+++++|+|+|++|.+++..+...|+.+|+++.|+.++.+.+ ++++.  ..++.+.+    +       ....+|+|++
T Consensus       119 ~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~----l-------~~~~~DivIn  187 (272)
T 3pwz_A          119 RNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRISRYEA----L-------EGQSFDIVVN  187 (272)
T ss_dssp             TTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEEECSGG----G-------TTCCCSEEEE
T ss_pred             cCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeEeeHHH----h-------cccCCCEEEE
Confidence            578999999999999999988899977899999999886654 44553  12232211    1       1136899999


Q ss_pred             cccC
Q 018529          246 CTGN  249 (354)
Q Consensus       246 ~~g~  249 (354)
                      +++.
T Consensus       188 aTp~  191 (272)
T 3pwz_A          188 ATSA  191 (272)
T ss_dssp             CSSG
T ss_pred             CCCC
Confidence            9865

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=96.57  E-value=0.018  Score=51.19  Aligned_cols=78  Identities=19%  Similarity=0.205  Sum_probs=51.8

Q ss_pred             CCCCeEEEEcC-ChhHHHHHHHHHHc-CCcEEEEEcCChhhHHHHHh-cCCc--eEEcCCCCChhHHHHHHHHcCCCccE
Q 018529          168 ERGSSVAVFGL-GAVGLAAAEGARIA-GASRIIGVDRSSKRFEEAKK-FGVT--DFVNTSEHDRPIQEVIAEMTNGGVDR  242 (354)
Q Consensus       168 ~~~~~vlI~G~-g~~G~~a~~~a~~~-g~~~vi~v~~~~~~~~~~~~-lg~~--~v~~~~~~~~~~~~~i~~~~~~~~dv  242 (354)
                      -.+.+|||+|+ |.+|...++.+... |..+|+++++++++.+.+.+ +...  ..+..+-.+   .+.+.+... ++|+
T Consensus        19 ~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d---~~~l~~~~~-~~D~   94 (344)
T 2gn4_A           19 LDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRD---LERLNYALE-GVDI   94 (344)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTC---HHHHHHHTT-TCSE
T ss_pred             hCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCC---HHHHHHHHh-cCCE
Confidence            34689999987 99999988888887 86689999999887665533 3211  122111112   123444433 6999


Q ss_pred             EEEcccC
Q 018529          243 SVECTGN  249 (354)
Q Consensus       243 v~d~~g~  249 (354)
                      ||.+++.
T Consensus        95 Vih~Aa~  101 (344)
T 2gn4_A           95 CIHAAAL  101 (344)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999874

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.57  E-value=0.0041  Score=52.32  Aligned_cols=79  Identities=18%  Similarity=0.280  Sum_probs=52.5

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcC--CcEEEEEcCChhhHHHHHhc-CCc-eEE--cCCCCChhHHH---HHHHHcCC
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAG--ASRIIGVDRSSKRFEEAKKF-GVT-DFV--NTSEHDRPIQE---VIAEMTNG  238 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g--~~~vi~v~~~~~~~~~~~~l-g~~-~v~--~~~~~~~~~~~---~i~~~~~~  238 (354)
                      ++.++||+|+ |.+|...++.+...|  + +|++++++.++.+.++++ +.. ..+  |..+. ..+.+   .+.+..+.
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~g~~~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~g~   79 (250)
T 1yo6_A            2 SPGSVVVTGANRGIGLGLVQQLVKDKNIR-HIIATARDVEKATELKSIKDSRVHVLPLTVTCD-KSLDTFVSKVGEIVGS   79 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTCTTCC-EEEEEESSGGGCHHHHTCCCTTEEEEECCTTCH-HHHHHHHHHHHHHHGG
T ss_pred             CCCEEEEecCCchHHHHHHHHHHhcCCCc-EEEEEecCHHHHHHHHhccCCceEEEEeecCCH-HHHHHHHHHHHHhcCC
Confidence            3578999987 999999999888889  7 899999998887777665 222 122  22221 12222   22222221


Q ss_pred             -CccEEEEcccC
Q 018529          239 -GVDRSVECTGN  249 (354)
Q Consensus       239 -~~dvv~d~~g~  249 (354)
                       ++|++|+++|.
T Consensus        80 ~~id~li~~Ag~   91 (250)
T 1yo6_A           80 DGLSLLINNAGV   91 (250)
T ss_dssp             GCCCEEEECCCC
T ss_pred             CCCcEEEECCcc
Confidence             69999998874

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=96.57  E-value=0.0078  Score=50.60  Aligned_cols=79  Identities=28%  Similarity=0.348  Sum_probs=51.6

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh-----cCCce-EE--cCCCCChhHHHHHHHHc--C
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-----FGVTD-FV--NTSEHDRPIQEVIAEMT--N  237 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~-----lg~~~-v~--~~~~~~~~~~~~i~~~~--~  237 (354)
                      +++++||+|+ |.+|...++.+...|+ +|+++++++++.+.+.+     .+... .+  |..+. ..+.+.+++..  .
T Consensus         6 ~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~   83 (248)
T 2pnf_A            6 QGKVSLVTGSTRGIGRAIAEKLASAGS-TVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSE-ESINKAFEEIYNLV   83 (248)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCH-HHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCH-HHHHHHHHHHHHhc
Confidence            4678999987 9999999998888999 89999998877654422     34322 22  22221 12333333221  2


Q ss_pred             CCccEEEEcccC
Q 018529          238 GGVDRSVECTGN  249 (354)
Q Consensus       238 ~~~dvv~d~~g~  249 (354)
                      +++|++|+++|.
T Consensus        84 ~~~d~vi~~Ag~   95 (248)
T 2pnf_A           84 DGIDILVNNAGI   95 (248)
T ss_dssp             SCCSEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999873

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=96.56  E-value=0.012  Score=49.34  Aligned_cols=78  Identities=24%  Similarity=0.324  Sum_probs=48.8

Q ss_pred             CCeEEEEcC-ChhHHHHHHHHHHcCCcEEEE-EcCChhhHHHH----HhcCCce-EE--cCCCCChhHHHHHHHHc--CC
Q 018529          170 GSSVAVFGL-GAVGLAAAEGARIAGASRIIG-VDRSSKRFEEA----KKFGVTD-FV--NTSEHDRPIQEVIAEMT--NG  238 (354)
Q Consensus       170 ~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~-v~~~~~~~~~~----~~lg~~~-v~--~~~~~~~~~~~~i~~~~--~~  238 (354)
                      |+++||+|+ |.+|...++.+...|+ +|++ ..+++++.+.+    ++.+... .+  |..+. .++.+.+.+..  .+
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~g   78 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGC-KVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKE-ADVEAMMKTAIDAWG   78 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSH-HHHHHHHHHHHHHSS
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCH-HHHHHHHHHHHHHcC
Confidence            467899987 9999999999989999 7777 57887665543    2234322 12  22221 12333333221  23


Q ss_pred             CccEEEEcccC
Q 018529          239 GVDRSVECTGN  249 (354)
Q Consensus       239 ~~dvv~d~~g~  249 (354)
                      ++|++|+++|.
T Consensus        79 ~id~li~~Ag~   89 (244)
T 1edo_A           79 TIDVVVNNAGI   89 (244)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999873

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=96.56  E-value=0.017  Score=50.54  Aligned_cols=75  Identities=19%  Similarity=0.232  Sum_probs=55.7

Q ss_pred             CCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcccC
Q 018529          170 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN  249 (354)
Q Consensus       170 ~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~  249 (354)
                      -.+|.|+|+|.+|...++.+...|. .|++.++++++.+.+.+.|+..   ..+    ..+.++.     .|+||.+++.
T Consensus        21 m~~I~iIG~G~mG~~~A~~l~~~G~-~V~~~dr~~~~~~~l~~~g~~~---~~~----~~~~~~~-----aDvvi~~vp~   87 (310)
T 3doj_A           21 MMEVGFLGLGIMGKAMSMNLLKNGF-KVTVWNRTLSKCDELVEHGASV---CES----PAEVIKK-----CKYTIAMLSD   87 (310)
T ss_dssp             SCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSGGGGHHHHHTTCEE---CSS----HHHHHHH-----CSEEEECCSS
T ss_pred             CCEEEEECccHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHCCCeE---cCC----HHHHHHh-----CCEEEEEcCC
Confidence            3579999999999998888888898 9999999999999888887632   111    3333332     6888888877


Q ss_pred             hHhHHHHH
Q 018529          250 IDNMISAF  257 (354)
Q Consensus       250 ~~~~~~~~  257 (354)
                      +...+..+
T Consensus        88 ~~~~~~v~   95 (310)
T 3doj_A           88 PCAALSVV   95 (310)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            55555444

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=96.56  E-value=0.011  Score=48.81  Aligned_cols=97  Identities=15%  Similarity=0.231  Sum_probs=60.6

Q ss_pred             CeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcccC
Q 018529          171 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN  249 (354)
Q Consensus       171 ~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~  249 (354)
                      .+|||+|+ |.+|...++.+...|. +|+++++++++.+.+. -++ .++..+-.+  . +.+.+... ++|+||.++|.
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~-~~~-~~~~~Dl~d--~-~~~~~~~~-~~d~vi~~a~~   77 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGF-EVTAVVRHPEKIKIEN-EHL-KVKKADVSS--L-DEVCEVCK-GADAVISAFNP   77 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTC-EEEEECSCGGGCCCCC-TTE-EEECCCTTC--H-HHHHHHHT-TCSEEEECCCC
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCC-EEEEEEcCcccchhcc-Cce-EEEEecCCC--H-HHHHHHhc-CCCEEEEeCcC
Confidence            57999997 9999999999999998 9999999887653221 121 222222122  1 23333333 58999999876


Q ss_pred             h-----------HhHHHHHHHhhCC-CceEEEEcCCC
Q 018529          250 I-----------DNMISAFECVHDG-WGVAVLVGVPS  274 (354)
Q Consensus       250 ~-----------~~~~~~~~~l~~~-~g~~v~~g~~~  274 (354)
                      .           .....+++.+... .+++++++...
T Consensus        78 ~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~  114 (227)
T 3dhn_A           78 GWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAG  114 (227)
T ss_dssp             ------CCSHHHHHHHHHHHHHHHTTCSEEEEECCST
T ss_pred             CCCChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCChh
Confidence            3           1233344444443 14899888643

>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21

Probab=96.56  E-value=0.0038  Score=52.85  Aligned_cols=100  Identities=22%  Similarity=0.266  Sum_probs=69.1

Q ss_pred             hhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCc-e--EEcCCCCChhHHHHHH
Q 018529          161 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT-D--FVNTSEHDRPIQEVIA  233 (354)
Q Consensus       161 l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~-~--v~~~~~~~~~~~~~i~  233 (354)
                      +.....++++.+||-+|+|. |..+..+++..|. +|++++.+++..+.+++    .|.. .  ++..+-.+  +     
T Consensus        28 l~~~~~~~~~~~VLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~--~-----   98 (256)
T 1nkv_A           28 LGRVLRMKPGTRILDLGSGS-GEMLCTWARDHGI-TGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAG--Y-----   98 (256)
T ss_dssp             HHHHTCCCTTCEEEEETCTT-CHHHHHHHHHTCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTT--C-----
T ss_pred             HHHhcCCCCCCEEEEECCCC-CHHHHHHHHhcCC-eEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHh--C-----
Confidence            34556789999999999976 8888899998888 99999999988777754    3432 1  12111111  1     


Q ss_pred             HHcCCCccEEEEcc------cChHhHHHHHHHhhCCCceEEEEc
Q 018529          234 EMTNGGVDRSVECT------GNIDNMISAFECVHDGWGVAVLVG  271 (354)
Q Consensus       234 ~~~~~~~dvv~d~~------g~~~~~~~~~~~l~~~~g~~v~~g  271 (354)
                       ...+.||+|+...      .....+..+.+.|+++ |++++..
T Consensus        99 -~~~~~fD~V~~~~~~~~~~~~~~~l~~~~r~Lkpg-G~l~~~~  140 (256)
T 1nkv_A           99 -VANEKCDVAACVGATWIAGGFAGAEELLAQSLKPG-GIMLIGE  140 (256)
T ss_dssp             -CCSSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEE-EEEEEEE
T ss_pred             -CcCCCCCEEEECCChHhcCCHHHHHHHHHHHcCCC-eEEEEec
Confidence             0124799998621      2235678888899997 9988754

>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A

Probab=96.54  E-value=0.0069  Score=53.89  Aligned_cols=92  Identities=17%  Similarity=0.142  Sum_probs=69.1

Q ss_pred             CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcc
Q 018529          168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  247 (354)
Q Consensus       168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~  247 (354)
                      -.|.+|.|+|.|.+|...++.++.+|. +|++.+++..+.+.++++|+..+   .  +  +.+.++     ..|+|+.++
T Consensus       162 l~gktvGIIG~G~IG~~vA~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~---~--~--l~ell~-----~aDvV~l~~  228 (351)
T 3jtm_A          162 LEGKTIGTVGAGRIGKLLLQRLKPFGC-NLLYHDRLQMAPELEKETGAKFV---E--D--LNEMLP-----KCDVIVINM  228 (351)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHGGGCC-EEEEECSSCCCHHHHHHHCCEEC---S--C--HHHHGG-----GCSEEEECS
T ss_pred             ccCCEEeEEEeCHHHHHHHHHHHHCCC-EEEEeCCCccCHHHHHhCCCeEc---C--C--HHHHHh-----cCCEEEECC
Confidence            358899999999999999999999999 89999988777777777886432   1  1  333332     379999987


Q ss_pred             cCh-H---h-HHHHHHHhhCCCceEEEEcCC
Q 018529          248 GNI-D---N-MISAFECVHDGWGVAVLVGVP  273 (354)
Q Consensus       248 g~~-~---~-~~~~~~~l~~~~g~~v~~g~~  273 (354)
                      +.. +   . -...++.|+++ ..++.++..
T Consensus       229 Plt~~t~~li~~~~l~~mk~g-ailIN~aRG  258 (351)
T 3jtm_A          229 PLTEKTRGMFNKELIGKLKKG-VLIVNNARG  258 (351)
T ss_dssp             CCCTTTTTCBSHHHHHHSCTT-EEEEECSCG
T ss_pred             CCCHHHHHhhcHHHHhcCCCC-CEEEECcCc
Confidence            632 1   2 25677889997 888888754

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=96.54  E-value=0.021  Score=50.23  Aligned_cols=89  Identities=17%  Similarity=0.203  Sum_probs=61.9

Q ss_pred             CCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcccC
Q 018529          170 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN  249 (354)
Q Consensus       170 ~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~  249 (354)
                      ..+|.|+|+|.+|...++.+...|. .|++.++++++.+.+.+.|+...   .+    ..+.+     ...|+||.+++.
T Consensus        31 ~~~I~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~l~~~g~~~~---~~----~~e~~-----~~aDvVi~~vp~   97 (320)
T 4dll_A           31 ARKITFLGTGSMGLPMARRLCEAGY-ALQVWNRTPARAASLAALGATIH---EQ----ARAAA-----RDADIVVSMLEN   97 (320)
T ss_dssp             CSEEEEECCTTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTTTCEEE---SS----HHHHH-----TTCSEEEECCSS
T ss_pred             CCEEEEECccHHHHHHHHHHHhCCC-eEEEEcCCHHHHHHHHHCCCEee---CC----HHHHH-----hcCCEEEEECCC
Confidence            3589999999999998888888898 89999999999998887775321   11    32222     146888888876


Q ss_pred             hHhHHHHH------HHhhCCCceEEEEcC
Q 018529          250 IDNMISAF------ECVHDGWGVAVLVGV  272 (354)
Q Consensus       250 ~~~~~~~~------~~l~~~~g~~v~~g~  272 (354)
                      +...+..+      ..+.++ ..++.++.
T Consensus        98 ~~~~~~v~~~~~~~~~l~~~-~~vi~~st  125 (320)
T 4dll_A           98 GAVVQDVLFAQGVAAAMKPG-SLFLDMAS  125 (320)
T ss_dssp             HHHHHHHHTTTCHHHHCCTT-CEEEECSC
T ss_pred             HHHHHHHHcchhHHhhCCCC-CEEEecCC
Confidence            54444443      245554 55555544

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=96.53  E-value=0.0074  Score=52.61  Aligned_cols=80  Identities=18%  Similarity=0.250  Sum_probs=51.7

Q ss_pred             CCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH----HhcCCce--E--EcCCCC-C--hhHHHHHHHH
Q 018529          168 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD--F--VNTSEH-D--RPIQEVIAEM  235 (354)
Q Consensus       168 ~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~----~~lg~~~--v--~~~~~~-~--~~~~~~i~~~  235 (354)
                      ..++++||+|+ |++|...+..+...|+ +|++++++.++.+.+    ++.+...  .  .|..+. +  ..+.+.+.+.
T Consensus        10 ~~~k~vlITGas~GIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~   88 (311)
T 3o26_A           10 TKRRCAVVTGGNKGIGFEICKQLSSNGI-MVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTH   88 (311)
T ss_dssp             --CCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             CCCcEEEEecCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHh
Confidence            35788999987 9999998888888999 899999998775443    2223211  2  233333 1  1222333332


Q ss_pred             cCCCccEEEEcccC
Q 018529          236 TNGGVDRSVECTGN  249 (354)
Q Consensus       236 ~~~~~dvv~d~~g~  249 (354)
                      . +++|++|+++|.
T Consensus        89 ~-g~iD~lv~nAg~  101 (311)
T 3o26_A           89 F-GKLDILVNNAGV  101 (311)
T ss_dssp             H-SSCCEEEECCCC
T ss_pred             C-CCCCEEEECCcc
Confidence            2 379999999985

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=96.53  E-value=0.0099  Score=51.33  Aligned_cols=36  Identities=31%  Similarity=0.445  Sum_probs=32.1

Q ss_pred             CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCCh
Q 018529          169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  204 (354)
Q Consensus       169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~  204 (354)
                      ...+|+|+|+|++|..+++.+-..|..++..+|.+.
T Consensus        35 ~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~   70 (292)
T 3h8v_A           35 RTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDK   70 (292)
T ss_dssp             GGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred             hCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence            346899999999999999999999999999998765

>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}

Probab=96.53  E-value=0.0085  Score=49.78  Aligned_cols=99  Identities=16%  Similarity=0.239  Sum_probs=66.6

Q ss_pred             hcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCc-eEEcCCCCChhHHHHHHHHcCC
Q 018529          164 VAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT-DFVNTSEHDRPIQEVIAEMTNG  238 (354)
Q Consensus       164 ~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~-~v~~~~~~~~~~~~~i~~~~~~  238 (354)
                      ...++++++||=+|+|..|..++.+++..+. +|++++.+++..+.+++    .+.. .++..+-..      +..+..+
T Consensus        50 ~~~~~~~~~vLDlG~G~~G~~~~~la~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~------~~~~~~~  122 (230)
T 3evz_A           50 KTFLRGGEVALEIGTGHTAMMALMAEKFFNC-KVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGI------IKGVVEG  122 (230)
T ss_dssp             HTTCCSSCEEEEECCTTTCHHHHHHHHHHCC-EEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCS------STTTCCS
T ss_pred             HhhcCCCCEEEEcCCCHHHHHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchh------hhhcccC
Confidence            3446789999999999678888888887766 99999999998887754    3431 222222100      1112224


Q ss_pred             CccEEEEcccC-------------------------hHhHHHHHHHhhCCCceEEEE
Q 018529          239 GVDRSVECTGN-------------------------IDNMISAFECVHDGWGVAVLV  270 (354)
Q Consensus       239 ~~dvv~d~~g~-------------------------~~~~~~~~~~l~~~~g~~v~~  270 (354)
                      .+|+|+....-                         ...++.+.+.|+++ |+++++
T Consensus       123 ~fD~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~  178 (230)
T 3evz_A          123 TFDVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPG-GKVALY  178 (230)
T ss_dssp             CEEEEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEE-EEEEEE
T ss_pred             ceeEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCC-eEEEEE
Confidence            79999954210                         34677777889997 888775

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=96.52  E-value=0.022  Score=49.75  Aligned_cols=76  Identities=20%  Similarity=0.274  Sum_probs=50.2

Q ss_pred             CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCC---hhhHHHH-Hhc----CCc-eEEcCCCCChhHHHHHHHHcCC
Q 018529          168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS---SKRFEEA-KKF----GVT-DFVNTSEHDRPIQEVIAEMTNG  238 (354)
Q Consensus       168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~---~~~~~~~-~~l----g~~-~v~~~~~~~~~~~~~i~~~~~~  238 (354)
                      -.++++||+|+|++|.+++..+...|+++|+++.|+   .++.+.+ +++    +.. .++...+.+ .+.+.+.     
T Consensus       146 l~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~-~~~~~l~-----  219 (312)
T 3t4e_A          146 MRGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQH-AFTEALA-----  219 (312)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHH-HHHHHHH-----
T ss_pred             cCCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhh-hhHhhcc-----
Confidence            357899999999999999999999999889999999   5555433 222    322 223332210 0122222     


Q ss_pred             CccEEEEcccC
Q 018529          239 GVDRSVECTGN  249 (354)
Q Consensus       239 ~~dvv~d~~g~  249 (354)
                      .+|+||+|++.
T Consensus       220 ~~DiIINaTp~  230 (312)
T 3t4e_A          220 SADILTNGTKV  230 (312)
T ss_dssp             HCSEEEECSST
T ss_pred             CceEEEECCcC
Confidence            37999999865

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=96.52  E-value=0.0068  Score=52.02  Aligned_cols=72  Identities=18%  Similarity=0.200  Sum_probs=51.3

Q ss_pred             CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHH-HHhcCCc-eEEcCCCCChhHHHHHHHHcCCCccEEEEc
Q 018529          169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEE-AKKFGVT-DFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  246 (354)
Q Consensus       169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~-~~~lg~~-~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~  246 (354)
                      ++.+++|+|+|++|.++++.+...|. +|++++++.++.+. +++++.. .+ +..+    + +.+.+   +++|+++++
T Consensus       118 ~~k~vlViGaGg~g~a~a~~L~~~G~-~V~v~~R~~~~~~~la~~~~~~~~~-~~~~----~-~~~~~---~~~DivVn~  187 (271)
T 1nyt_A          118 PGLRILLIGAGGASRGVLLPLLSLDC-AVTITNRTVSRAEELAKLFAHTGSI-QALS----M-DELEG---HEFDLIINA  187 (271)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHHTGGGSSE-EECC----S-GGGTT---CCCSEEEEC
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHhhccCCe-eEec----H-HHhcc---CCCCEEEEC
Confidence            57899999999999999999999997 99999999888654 4555431 11 1111    1 01111   469999999


Q ss_pred             ccCh
Q 018529          247 TGNI  250 (354)
Q Consensus       247 ~g~~  250 (354)
                      +|..
T Consensus       188 t~~~  191 (271)
T 1nyt_A          188 TSSG  191 (271)
T ss_dssp             CSCG
T ss_pred             CCCC
Confidence            9874

>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*

Probab=96.52  E-value=0.0055  Score=52.27  Aligned_cols=97  Identities=21%  Similarity=0.248  Sum_probs=64.7

Q ss_pred             CCCCCeEEEEcCChhHHHHHHHHHHc---CCcEEEEEcCChhhHHHHHh----cCCceEEcCCCCChhHHHHHHHHcCCC
Q 018529          167 PERGSSVAVFGLGAVGLAAAEGARIA---GASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTNGG  239 (354)
Q Consensus       167 ~~~~~~vlI~G~g~~G~~a~~~a~~~---g~~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~~~~~~  239 (354)
                      +++|.+||=+|||. |..+..+++..   |+ +|++++.+++-.+.+++    .+...-+.+...+      +.++..+.
T Consensus        68 ~~~~~~vLDlGcGt-G~~~~~la~~~~~~~~-~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D------~~~~~~~~  139 (261)
T 4gek_A           68 VQPGTQVYDLGCSL-GAATLSVRRNIHHDNC-KIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGD------IRDIAIEN  139 (261)
T ss_dssp             CCTTCEEEEETCTT-THHHHHHHHTCCSSSC-EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESC------TTTCCCCS
T ss_pred             CCCCCEEEEEeCCC-CHHHHHHHHhcCCCCC-EEEEEECCHHHHHHHHHHHHhhccCceEEEeecc------cccccccc
Confidence            78999999999974 77888888865   55 89999999988877754    3432111111111      11122246


Q ss_pred             ccEEEEcccC--------hHhHHHHHHHhhCCCceEEEEcC
Q 018529          240 VDRSVECTGN--------IDNMISAFECVHDGWGVAVLVGV  272 (354)
Q Consensus       240 ~dvv~d~~g~--------~~~~~~~~~~l~~~~g~~v~~g~  272 (354)
                      +|+|+....-        ...+..+.+.|+|+ |++++...
T Consensus       140 ~d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpG-G~lii~e~  179 (261)
T 4gek_A          140 ASMVVLNFTLQFLEPSERQALLDKIYQGLNPG-GALVLSEK  179 (261)
T ss_dssp             EEEEEEESCGGGSCHHHHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             cccceeeeeeeecCchhHhHHHHHHHHHcCCC-cEEEEEec
Confidence            8888764321        13578899999997 99987643

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=96.52  E-value=0.013  Score=50.34  Aligned_cols=79  Identities=20%  Similarity=0.281  Sum_probs=50.1

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCC------------hhhHH----HHHhcCCceE-E--cCCCCC--h
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRS------------SKRFE----EAKKFGVTDF-V--NTSEHD--R  226 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~------------~~~~~----~~~~lg~~~v-~--~~~~~~--~  226 (354)
                      .++++||+|+ |++|.+.++.+...|+ +|+.++++            .++.+    .+++.+.... +  |..+.+  +
T Consensus         9 ~~k~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~   87 (281)
T 3s55_A            9 EGKTALITGGARGMGRSHAVALAEAGA-DIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALE   87 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHH
Confidence            5789999987 9999999999999999 89998886            33332    2334454322 2  332221  1


Q ss_pred             hHHHHHHHHcCCCccEEEEcccC
Q 018529          227 PIQEVIAEMTNGGVDRSVECTGN  249 (354)
Q Consensus       227 ~~~~~i~~~~~~~~dvv~d~~g~  249 (354)
                      .+.+.+.+.. +++|++++++|.
T Consensus        88 ~~~~~~~~~~-g~id~lv~nAg~  109 (281)
T 3s55_A           88 SFVAEAEDTL-GGIDIAITNAGI  109 (281)
T ss_dssp             HHHHHHHHHH-TCCCEEEECCCC
T ss_pred             HHHHHHHHhc-CCCCEEEECCCC
Confidence            1222232222 379999999884

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=96.52  E-value=0.0055  Score=52.98  Aligned_cols=79  Identities=20%  Similarity=0.324  Sum_probs=50.4

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH----hcCCce--EEcCCCCCh-hHHHHHHHHc--CC
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD--FVNTSEHDR-PIQEVIAEMT--NG  238 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~----~lg~~~--v~~~~~~~~-~~~~~i~~~~--~~  238 (354)
                      ++.++||+|+ |++|...++.+...|+ +|+++++++++.+.+.    +.+...  ++..+-.+. .+.+.+.+..  .+
T Consensus        27 ~~k~vlITGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g  105 (286)
T 1xu9_A           27 QGKKVIVTGASKGIGREMAYHLAKMGA-HVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMG  105 (286)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            3678999987 9999999998888999 8999999988766542    234322  222221221 2222222221  13


Q ss_pred             CccEEEEc-cc
Q 018529          239 GVDRSVEC-TG  248 (354)
Q Consensus       239 ~~dvv~d~-~g  248 (354)
                      ++|+++++ .|
T Consensus       106 ~iD~li~naag  116 (286)
T 1xu9_A          106 GLDMLILNHIT  116 (286)
T ss_dssp             SCSEEEECCCC
T ss_pred             CCCEEEECCcc
Confidence            79999998 44

>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5

Probab=96.51  E-value=0.013  Score=50.16  Aligned_cols=70  Identities=21%  Similarity=0.281  Sum_probs=51.6

Q ss_pred             CCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHH-HHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEE
Q 018529          166 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFE-EAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSV  244 (354)
Q Consensus       166 ~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~-~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~  244 (354)
                      +...+.+++|+|+|++|.+++..+...|+.+|+++.|+.+|.+ ++++++.+ ...  +    .    .   ...+|+|+
T Consensus       115 ~~~~~~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~~~~-~~~--~----~----~---~~~~DivI  180 (271)
T 1npy_A          115 HLNKNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYA-YIN--S----L----E---NQQADILV  180 (271)
T ss_dssp             TCCTTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCE-EES--C----C----T---TCCCSEEE
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCc-cch--h----h----h---cccCCEEE
Confidence            3446789999999999999999999999878999999988755 45556652 110  1    0    0   02589999


Q ss_pred             EcccC
Q 018529          245 ECTGN  249 (354)
Q Consensus       245 d~~g~  249 (354)
                      ++++.
T Consensus       181 naTp~  185 (271)
T 1npy_A          181 NVTSI  185 (271)
T ss_dssp             ECSST
T ss_pred             ECCCC
Confidence            99875

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=96.51  E-value=0.0084  Score=53.41  Aligned_cols=79  Identities=24%  Similarity=0.365  Sum_probs=51.6

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhh-----------HHHHHhcCCceE---EcCCCCChhHHHHHH
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR-----------FEEAKKFGVTDF---VNTSEHDRPIQEVIA  233 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~-----------~~~~~~lg~~~v---~~~~~~~~~~~~~i~  233 (354)
                      .|+++||+|+ +++|.+.+..+...|+ +|+.+++++++           .+.+++.|....   .|..+.+ .+.+.+.
T Consensus        44 ~gk~vlVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~-~v~~~~~  121 (346)
T 3kvo_A           44 AGCTVFITGASRGIGKAIALKAAKDGA-NIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQ-QISAAVE  121 (346)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHH-HHHHHHH
T ss_pred             CCCEEEEeCCChHHHHHHHHHHHHCCC-EEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHH-HHHHHHH
Confidence            5789999987 9999999888888899 88888887763           233344554322   2333321 2222222


Q ss_pred             HHcC--CCccEEEEcccC
Q 018529          234 EMTN--GGVDRSVECTGN  249 (354)
Q Consensus       234 ~~~~--~~~dvv~d~~g~  249 (354)
                      +...  +++|++++++|.
T Consensus       122 ~~~~~~g~iDilVnnAG~  139 (346)
T 3kvo_A          122 KAIKKFGGIDILVNNASA  139 (346)
T ss_dssp             HHHHHHSCCCEEEECCCC
T ss_pred             HHHHHcCCCCEEEECCCC
Confidence            2211  379999999884

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=96.51  E-value=0.0077  Score=50.88  Aligned_cols=77  Identities=21%  Similarity=0.312  Sum_probs=50.7

Q ss_pred             eEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-HhcCCc-eEEcCCCCC-hhHHHHHHHHcC--CCccEEEE
Q 018529          172 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVT-DFVNTSEHD-RPIQEVIAEMTN--GGVDRSVE  245 (354)
Q Consensus       172 ~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~~lg~~-~v~~~~~~~-~~~~~~i~~~~~--~~~dvv~d  245 (354)
                      ++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+ ++++.. ..+..+-.+ .++.+.+.+...  +++|++++
T Consensus         2 ~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvn   80 (248)
T 3asu_A            2 IVLVTGATAGFGECITRRFIQQGH-KVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVN   80 (248)
T ss_dssp             EEEETTTTSTTHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEEEE
T ss_pred             EEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEE
Confidence            6888987 9999999988888999 899999998876654 334432 222222222 223333443332  37999999


Q ss_pred             cccC
Q 018529          246 CTGN  249 (354)
Q Consensus       246 ~~g~  249 (354)
                      ++|.
T Consensus        81 nAg~   84 (248)
T 3asu_A           81 NAGL   84 (248)
T ss_dssp             CCCC
T ss_pred             CCCc
Confidence            9873

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=96.51  E-value=0.021  Score=47.98  Aligned_cols=79  Identities=24%  Similarity=0.299  Sum_probs=48.4

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcC-ChhhHHHH----HhcCCceE-E--cCCCCChhHHHHHHHHcC--
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR-SSKRFEEA----KKFGVTDF-V--NTSEHDRPIQEVIAEMTN--  237 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~-~~~~~~~~----~~lg~~~v-~--~~~~~~~~~~~~i~~~~~--  237 (354)
                      .++++||+|+ |++|.+.+..+...|+ +|+.+++ ++++.+.+    ++.+.... +  |..+. .++.+.+++...  
T Consensus         3 ~~k~~lVTGas~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~-~~v~~~~~~~~~~~   80 (246)
T 3osu_A            3 MTKSALVTGASRGIGRSIALQLAEEGY-NVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADA-DEVKAMIKEVVSQF   80 (246)
T ss_dssp             CSCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCH-HHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCH-HHHHHHHHHHHHHc
Confidence            3678999987 9999999998889999 7776655 54544432    33454322 2  22221 122222222211  


Q ss_pred             CCccEEEEcccC
Q 018529          238 GGVDRSVECTGN  249 (354)
Q Consensus       238 ~~~dvv~d~~g~  249 (354)
                      +++|++++++|.
T Consensus        81 g~id~lv~nAg~   92 (246)
T 3osu_A           81 GSLDVLVNNAGI   92 (246)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            379999999874

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=96.51  E-value=0.0098  Score=50.98  Aligned_cols=80  Identities=28%  Similarity=0.326  Sum_probs=52.3

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH----HhcCCceEEcCCC-CC-hhHHHHHHHHc--CCC
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTDFVNTSE-HD-RPIQEVIAEMT--NGG  239 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~----~~lg~~~v~~~~~-~~-~~~~~~i~~~~--~~~  239 (354)
                      .|+++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+    ++.|....+..-+ .+ .++.+.+++..  .++
T Consensus        25 ~gk~~lVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  103 (271)
T 4ibo_A           25 GGRTALVTGSSRGLGRAMAEGLAVAGA-RILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQGID  103 (271)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHCCC
Confidence            4788999987 9999999998889999 899999988776543    2335433221111 12 12222222221  237


Q ss_pred             ccEEEEcccC
Q 018529          240 VDRSVECTGN  249 (354)
Q Consensus       240 ~dvv~d~~g~  249 (354)
                      +|++++++|.
T Consensus       104 iD~lv~nAg~  113 (271)
T 4ibo_A          104 VDILVNNAGI  113 (271)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999884

>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}

Probab=96.50  E-value=0.01  Score=52.49  Aligned_cols=90  Identities=22%  Similarity=0.274  Sum_probs=67.2

Q ss_pred             CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcc
Q 018529          168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  247 (354)
Q Consensus       168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~  247 (354)
                      -.|.+|.|+|.|.+|...++.++.+|. +|++.+++.++ +.+.++|+..    .  +  +.+.++     ..|+|+.++
T Consensus       163 l~g~tvgIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~~~-~~~~~~g~~~----~--~--l~ell~-----~aDvV~l~~  227 (335)
T 2g76_A          163 LNGKTLGILGLGRIGREVATRMQSFGM-KTIGYDPIISP-EVSASFGVQQ----L--P--LEEIWP-----LCDFITVHT  227 (335)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSSCH-HHHHHTTCEE----C--C--HHHHGG-----GCSEEEECC
T ss_pred             CCcCEEEEEeECHHHHHHHHHHHHCCC-EEEEECCCcch-hhhhhcCcee----C--C--HHHHHh-----cCCEEEEec
Confidence            457899999999999999999999999 89999987766 4566788742    1  1  333222     479999988


Q ss_pred             cChH----hH-HHHHHHhhCCCceEEEEcCC
Q 018529          248 GNID----NM-ISAFECVHDGWGVAVLVGVP  273 (354)
Q Consensus       248 g~~~----~~-~~~~~~l~~~~g~~v~~g~~  273 (354)
                      +..+    .+ ...++.++++ +.++.++..
T Consensus       228 P~t~~t~~li~~~~l~~mk~g-ailIN~arg  257 (335)
T 2g76_A          228 PLLPSTTGLLNDNTFAQCKKG-VRVVNCARG  257 (335)
T ss_dssp             CCCTTTTTSBCHHHHTTSCTT-EEEEECSCT
T ss_pred             CCCHHHHHhhCHHHHhhCCCC-cEEEECCCc
Confidence            7532    22 4577889997 888888764

>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*

Probab=96.49  E-value=0.018  Score=51.41  Aligned_cols=95  Identities=17%  Similarity=0.150  Sum_probs=66.2

Q ss_pred             CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCC----hhh---------HHHHHhcCCceEEcCCCCChhHHHHHHH
Q 018529          168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS----SKR---------FEEAKKFGVTDFVNTSEHDRPIQEVIAE  234 (354)
Q Consensus       168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~----~~~---------~~~~~~lg~~~v~~~~~~~~~~~~~i~~  234 (354)
                      -++.+|+|+|+|.+|..+++++..+|+++|+.++++    .+|         .+++++.+..    ...  .++.+.++ 
T Consensus       190 l~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~~~----~~~--~~L~eav~-  262 (388)
T 1vl6_A          190 IEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKGILNENDPETCLNEYHLEIARITNPE----RLS--GDLETALE-  262 (388)
T ss_dssp             TTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCTT----CCC--SCHHHHHT-
T ss_pred             CCCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCcccCCCcccccCHHHHHHHHhhhcc----Cch--hhHHHHHc-
Confidence            366799999999999999999999999899999998    544         4455553321    111  22555553 


Q ss_pred             HcCCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCC
Q 018529          235 MTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS  274 (354)
Q Consensus       235 ~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~  274 (354)
                          ++|++|-+++..-.-+..++.|+++ ..++-++.+.
T Consensus       263 ----~ADVlIG~Sap~l~t~emVk~Ma~~-pIIfalSNPt  297 (388)
T 1vl6_A          263 ----GADFFIGVSRGNILKPEWIKKMSRK-PVIFALANPV  297 (388)
T ss_dssp             ----TCSEEEECSCSSCSCHHHHTTSCSS-CEEEECCSSS
T ss_pred             ----cCCEEEEeCCCCccCHHHHHhcCCC-CEEEEcCCCC
Confidence                3799999887433455777788875 6665555543

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=96.49  E-value=0.04  Score=48.82  Aligned_cols=75  Identities=20%  Similarity=0.266  Sum_probs=48.8

Q ss_pred             CCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCCh----hhHHHHHhc------CCceEEcCCCCChhHHHHHHHHcCC
Q 018529          170 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS----KRFEEAKKF------GVTDFVNTSEHDRPIQEVIAEMTNG  238 (354)
Q Consensus       170 ~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~----~~~~~~~~l------g~~~v~~~~~~~~~~~~~i~~~~~~  238 (354)
                      +.+|||+|+ |.+|...+..+...|. .|++++++.    +..+.++.+      .--.++..+-.+   .+.+.++.. 
T Consensus        25 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d---~~~~~~~~~-   99 (351)
T 3ruf_A           25 PKTWLITGVAGFIGSNLLEKLLKLNQ-VVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRD---LTTCEQVMK-   99 (351)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTC---HHHHHHHTT-
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCC---HHHHHHHhc-
Confidence            578999997 9999999999999998 899988854    333333332      211222222222   123444433 


Q ss_pred             CccEEEEcccC
Q 018529          239 GVDRSVECTGN  249 (354)
Q Consensus       239 ~~dvv~d~~g~  249 (354)
                      ++|+||.+++.
T Consensus       100 ~~d~Vih~A~~  110 (351)
T 3ruf_A          100 GVDHVLHQAAL  110 (351)
T ss_dssp             TCSEEEECCCC
T ss_pred             CCCEEEECCcc
Confidence            69999999874

>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*

Probab=96.48  E-value=0.02  Score=50.71  Aligned_cols=89  Identities=18%  Similarity=0.272  Sum_probs=65.7

Q ss_pred             CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcc
Q 018529          168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  247 (354)
Q Consensus       168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~  247 (354)
                      -.+.+|.|+|.|.+|...++.++..|. +|++.+++.++ +.+.++|+..    .  +  +.+.+++     .|+|+.++
T Consensus       148 l~g~~vgIIG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~-~~~~~~g~~~----~--~--l~~~l~~-----aDvVil~v  212 (334)
T 2dbq_A          148 VYGKTIGIIGLGRIGQAIAKRAKGFNM-RILYYSRTRKE-EVERELNAEF----K--P--LEDLLRE-----SDFVVLAV  212 (334)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCH-HHHHHHCCEE----C--C--HHHHHHH-----CSEEEECC
T ss_pred             CCCCEEEEEccCHHHHHHHHHHHhCCC-EEEEECCCcch-hhHhhcCccc----C--C--HHHHHhh-----CCEEEECC
Confidence            357799999999999999999999999 89999998877 6666677531    1  1  4443433     69999998


Q ss_pred             cChH----hH-HHHHHHhhCCCceEEEEcC
Q 018529          248 GNID----NM-ISAFECVHDGWGVAVLVGV  272 (354)
Q Consensus       248 g~~~----~~-~~~~~~l~~~~g~~v~~g~  272 (354)
                      +...    .+ ...+..++++ ..++.++.
T Consensus       213 p~~~~t~~~i~~~~~~~mk~~-ailIn~sr  241 (334)
T 2dbq_A          213 PLTRETYHLINEERLKLMKKT-AILINIAR  241 (334)
T ss_dssp             CCCTTTTTCBCHHHHHHSCTT-CEEEECSC
T ss_pred             CCChHHHHhhCHHHHhcCCCC-cEEEECCC
Confidence            7543    22 3567788886 77777664

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=96.48  E-value=0.014  Score=50.69  Aligned_cols=80  Identities=19%  Similarity=0.259  Sum_probs=50.3

Q ss_pred             CCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCC------------hhhHHH----HHhcCCceE---EcCCCCChh
Q 018529          168 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRS------------SKRFEE----AKKFGVTDF---VNTSEHDRP  227 (354)
Q Consensus       168 ~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~------------~~~~~~----~~~lg~~~v---~~~~~~~~~  227 (354)
                      -.++++||+|+ +++|.+.++.+...|+ +|++++++            .++.+.    +++.|....   .|..+. .+
T Consensus        26 l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~  103 (299)
T 3t7c_A           26 VEGKVAFITGAARGQGRSHAITLAREGA-DIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDF-DA  103 (299)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCH-HH
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCH-HH
Confidence            35789999987 9999999988889999 88888776            443332    234454322   233222 12


Q ss_pred             HHHHHHHHcC--CCccEEEEcccC
Q 018529          228 IQEVIAEMTN--GGVDRSVECTGN  249 (354)
Q Consensus       228 ~~~~i~~~~~--~~~dvv~d~~g~  249 (354)
                      +.+.+++...  +++|++++++|.
T Consensus       104 v~~~~~~~~~~~g~iD~lv~nAg~  127 (299)
T 3t7c_A          104 MQAAVDDGVTQLGRLDIVLANAAL  127 (299)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCC
T ss_pred             HHHHHHHHHHHhCCCCEEEECCCC
Confidence            2222322211  479999998873

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=96.48  E-value=0.009  Score=50.44  Aligned_cols=79  Identities=24%  Similarity=0.393  Sum_probs=51.9

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-HhcCCce--EE--cCCCCChhHHHHHHHHc-CCCcc
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTD--FV--NTSEHDRPIQEVIAEMT-NGGVD  241 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~~lg~~~--v~--~~~~~~~~~~~~i~~~~-~~~~d  241 (354)
                      .++++||+|+ |.+|...+..+...|+ +|+++++++++.+.+ ++++...  .+  |..+. ..+.+.+++.. .+++|
T Consensus        10 ~~k~vlITGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~id   87 (254)
T 2wsb_A           10 DGACAAVTGAGSGIGLEICRAFAASGA-RLILIDREAAALDRAAQELGAAVAARIVADVTDA-EAMTAAAAEAEAVAPVS   87 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGEEEEEECCTTCH-HHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcccceeEEEEecCCH-HHHHHHHHHHHhhCCCc
Confidence            4678999987 9999999998888999 899999998776544 3344322  22  33221 12222222211 14799


Q ss_pred             EEEEcccC
Q 018529          242 RSVECTGN  249 (354)
Q Consensus       242 vv~d~~g~  249 (354)
                      ++++++|.
T Consensus        88 ~li~~Ag~   95 (254)
T 2wsb_A           88 ILVNSAGI   95 (254)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCcc
Confidence            99999874

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=96.48  E-value=0.011  Score=50.88  Aligned_cols=77  Identities=21%  Similarity=0.308  Sum_probs=51.7

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-HhcCCce-EEcCCCCC-hhHHHHHHHHcC-CCccEE
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTD-FVNTSEHD-RPIQEVIAEMTN-GGVDRS  243 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~~lg~~~-v~~~~~~~-~~~~~~i~~~~~-~~~dvv  243 (354)
                      .++++||+|+ |++|.+.++.+...|+ +|++++++.++.+.+ ++++... .+..+-.+ ..+.+.+++... ++.|++
T Consensus        29 ~~k~vlVTGas~GIG~aia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~id~l  107 (281)
T 3ppi_A           29 EGASAIVSGGAGGLGEATVRRLHADGL-GVVIADLAAEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAANQLGRLRYA  107 (281)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHTTSSEEEEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCeE
Confidence            4688999987 9999999888888999 899999998877655 4455432 22222122 223333444421 278999


Q ss_pred             EEc
Q 018529          244 VEC  246 (354)
Q Consensus       244 ~d~  246 (354)
                      +.+
T Consensus       108 v~~  110 (281)
T 3ppi_A          108 VVA  110 (281)
T ss_dssp             EEC
T ss_pred             EEc
Confidence            988

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=96.47  E-value=0.024  Score=51.65  Aligned_cols=95  Identities=16%  Similarity=0.171  Sum_probs=61.5

Q ss_pred             CeEEEEcCChhHHHHHHHHHHcCC--cEEEEEcCChhhHHHHH-hcC------CceE-EcCCCCChhHHHHHHHHcCCCc
Q 018529          171 SSVAVFGLGAVGLAAAEGARIAGA--SRIIGVDRSSKRFEEAK-KFG------VTDF-VNTSEHDRPIQEVIAEMTNGGV  240 (354)
Q Consensus       171 ~~vlI~G~g~~G~~a~~~a~~~g~--~~vi~v~~~~~~~~~~~-~lg------~~~v-~~~~~~~~~~~~~i~~~~~~~~  240 (354)
                      .+|+|+|+|.+|...++.+...|.  ..|++++++.++.+.+. +++      +..+ ++..+ ..++.+.+++.   ++
T Consensus         2 ~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d-~~~l~~~l~~~---~~   77 (405)
T 4ina_A            2 AKVLQIGAGGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADS-IEELVALINEV---KP   77 (405)
T ss_dssp             CEEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTC-HHHHHHHHHHH---CC
T ss_pred             CEEEEECCCHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCC-HHHHHHHHHhh---CC
Confidence            378999999999999988887773  38888999998876543 332      2211 22222 12233333332   58


Q ss_pred             cEEEEcccChHhHHHHHHHhhCCCceEEEE
Q 018529          241 DRSVECTGNIDNMISAFECVHDGWGVAVLV  270 (354)
Q Consensus       241 dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~  270 (354)
                      |+|++++|.......+..++..+ -.++.+
T Consensus        78 DvVin~ag~~~~~~v~~a~l~~g-~~vvD~  106 (405)
T 4ina_A           78 QIVLNIALPYQDLTIMEACLRTG-VPYLDT  106 (405)
T ss_dssp             SEEEECSCGGGHHHHHHHHHHHT-CCEEES
T ss_pred             CEEEECCCcccChHHHHHHHHhC-CCEEEe
Confidence            99999998655555666677774 555544

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=96.47  E-value=0.0037  Score=51.90  Aligned_cols=64  Identities=14%  Similarity=0.258  Sum_probs=45.2

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcc
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  247 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~  247 (354)
                      .++++||+|+ |++|.+.++.+...|+ +|++++++.+             .|..+. +.+.+.++++  +++|++++++
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~-------------~D~~~~-~~v~~~~~~~--g~id~lv~nA   67 (223)
T 3uce_A            5 DKTVYVVLGGTSGIGAELAKQLESEHT-IVHVASRQTG-------------LDISDE-KSVYHYFETI--GAFDHLIVTA   67 (223)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHCSTTE-EEEEESGGGT-------------CCTTCH-HHHHHHHHHH--CSEEEEEECC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEecCCcc-------------cCCCCH-HHHHHHHHHh--CCCCEEEECC
Confidence            4678999987 9999998888888898 8999877654             223222 1233334444  5789999988


Q ss_pred             cC
Q 018529          248 GN  249 (354)
Q Consensus       248 g~  249 (354)
                      |.
T Consensus        68 g~   69 (223)
T 3uce_A           68 GS   69 (223)
T ss_dssp             CC
T ss_pred             CC
Confidence            74

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=96.47  E-value=0.017  Score=53.52  Aligned_cols=93  Identities=13%  Similarity=0.123  Sum_probs=58.3

Q ss_pred             CCCeEEEEcCChhHHHHHHHHHHc-CCcEEEEEcCChhhHHHHHh-cCCceE-EcCCCCChhHHHHHHHHcCCCccEEEE
Q 018529          169 RGSSVAVFGLGAVGLAAAEGARIA-GASRIIGVDRSSKRFEEAKK-FGVTDF-VNTSEHDRPIQEVIAEMTNGGVDRSVE  245 (354)
Q Consensus       169 ~~~~vlI~G~g~~G~~a~~~a~~~-g~~~vi~v~~~~~~~~~~~~-lg~~~v-~~~~~~~~~~~~~i~~~~~~~~dvv~d  245 (354)
                      ++.+|+|+|+|.+|...+..+... |. +|++++++.++.+.+.+ .+...+ ++..+. .++.+.+.     ++|+|++
T Consensus        22 ~~k~VlIiGAGgiG~aia~~L~~~~g~-~V~v~~R~~~ka~~la~~~~~~~~~~D~~d~-~~l~~~l~-----~~DvVIn   94 (467)
T 2axq_A           22 MGKNVLLLGSGFVAQPVIDTLAANDDI-NVTVACRTLANAQALAKPSGSKAISLDVTDD-SALDKVLA-----DNDVVIS   94 (467)
T ss_dssp             -CEEEEEECCSTTHHHHHHHHHTSTTE-EEEEEESSHHHHHHHHGGGTCEEEECCTTCH-HHHHHHHH-----TSSEEEE
T ss_pred             CCCEEEEECChHHHHHHHHHHHhCCCC-eEEEEECCHHHHHHHHHhcCCcEEEEecCCH-HHHHHHHc-----CCCEEEE
Confidence            356899999999999988888877 56 89999999888766543 344321 222221 12222221     5899999


Q ss_pred             cccChHhHHHHHHHhhCCCceEEE
Q 018529          246 CTGNIDNMISAFECVHDGWGVAVL  269 (354)
Q Consensus       246 ~~g~~~~~~~~~~~l~~~~g~~v~  269 (354)
                      +++..........++..+ ..++.
T Consensus        95 ~tp~~~~~~v~~a~l~~g-~~vvd  117 (467)
T 2axq_A           95 LIPYTFHPNVVKSAIRTK-TDVVT  117 (467)
T ss_dssp             CSCGGGHHHHHHHHHHHT-CEEEE
T ss_pred             CCchhhhHHHHHHHHhcC-CEEEE
Confidence            998643333344566664 44443

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=96.45  E-value=0.0067  Score=51.27  Aligned_cols=80  Identities=18%  Similarity=0.213  Sum_probs=50.9

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH----HhcCCce-EEcCCCCC-hhHHHHHHHHc--CCC
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-FVNTSEHD-RPIQEVIAEMT--NGG  239 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~----~~lg~~~-v~~~~~~~-~~~~~~i~~~~--~~~  239 (354)
                      .+.++||+|+ |.+|...+..+...|+ +|+++++++++.+.+    ++.+... .+..+-.+ ..+.+.+.+..  .++
T Consensus        10 ~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   88 (255)
T 1fmc_A           10 DGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGK   88 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence            4678999987 9999999998888899 899999988765533    2234322 22221122 12222222211  137


Q ss_pred             ccEEEEcccC
Q 018529          240 VDRSVECTGN  249 (354)
Q Consensus       240 ~dvv~d~~g~  249 (354)
                      +|++|+++|.
T Consensus        89 ~d~vi~~Ag~   98 (255)
T 1fmc_A           89 VDILVNNAGG   98 (255)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999874

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=96.45  E-value=0.0094  Score=51.51  Aligned_cols=79  Identities=24%  Similarity=0.347  Sum_probs=50.7

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhh-----------HHHHHhcCCceE-E--cCCCCC--hhHHHH
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR-----------FEEAKKFGVTDF-V--NTSEHD--RPIQEV  231 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~-----------~~~~~~lg~~~v-~--~~~~~~--~~~~~~  231 (354)
                      .++++||+|+ |++|.+.++.+...|+ +|+.+++++++           .+.+++.+.... +  |..+.+  +.+.+.
T Consensus         8 ~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   86 (285)
T 3sc4_A            8 RGKTMFISGGSRGIGLAIAKRVAADGA-NVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVAK   86 (285)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHTTTC-EEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH
Confidence            4689999987 9999998888888899 89999888752           222344454322 2  333221  112222


Q ss_pred             HHHHcCCCccEEEEcccC
Q 018529          232 IAEMTNGGVDRSVECTGN  249 (354)
Q Consensus       232 i~~~~~~~~dvv~d~~g~  249 (354)
                      +.+.. +++|++++++|.
T Consensus        87 ~~~~~-g~id~lvnnAg~  103 (285)
T 3sc4_A           87 TVEQF-GGIDICVNNASA  103 (285)
T ss_dssp             HHHHH-SCCSEEEECCCC
T ss_pred             HHHHc-CCCCEEEECCCC
Confidence            32222 379999999884

>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17

Probab=96.44  E-value=0.016  Score=50.81  Aligned_cols=98  Identities=14%  Similarity=0.112  Sum_probs=65.0

Q ss_pred             CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcC------C--ceEEcCCCCChhHHHHHHHHcCCC
Q 018529          168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG------V--TDFVNTSEHDRPIQEVIAEMTNGG  239 (354)
Q Consensus       168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg------~--~~v~~~~~~~~~~~~~i~~~~~~~  239 (354)
                      .++.+||++|+|. |..+..+++..+..+|++++.+++-.+.+++.-      .  .++- ....+  ..+.+.. ..+.
T Consensus       107 ~~~~~VLdIG~G~-G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~-~~~~D--~~~~l~~-~~~~  181 (314)
T 2b2c_A          107 PDPKRVLIIGGGD-GGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLD-LFCGD--GFEFLKN-HKNE  181 (314)
T ss_dssp             SSCCEEEEESCTT-SHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEE-EECSC--HHHHHHH-CTTC
T ss_pred             CCCCEEEEEcCCc-CHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEE-EEECh--HHHHHHh-cCCC
Confidence            3568999999864 677778887765459999999999988887631      1  1121 11122  4444443 3348


Q ss_pred             ccEEEEcccC----------hHhHHHHHHHhhCCCceEEEEc
Q 018529          240 VDRSVECTGN----------IDNMISAFECVHDGWGVAVLVG  271 (354)
Q Consensus       240 ~dvv~d~~g~----------~~~~~~~~~~l~~~~g~~v~~g  271 (354)
                      ||+|+.....          .+.++.+.+.|+++ |.+++-.
T Consensus       182 fD~Ii~d~~~~~~~~~~l~t~~~l~~~~~~Lkpg-G~lv~~~  222 (314)
T 2b2c_A          182 FDVIITDSSDPVGPAESLFGQSYYELLRDALKED-GILSSQG  222 (314)
T ss_dssp             EEEEEECCC-------------HHHHHHHHEEEE-EEEEEEC
T ss_pred             ceEEEEcCCCCCCcchhhhHHHHHHHHHhhcCCC-eEEEEEC
Confidence            9999854311          36788899999997 9988764

>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*

Probab=96.44  E-value=0.015  Score=45.76  Aligned_cols=100  Identities=18%  Similarity=0.137  Sum_probs=63.9

Q ss_pred             CCCCCCeEEEEcCChhHHHHHHHHHHcCC-cEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHH-HcCCCccEE
Q 018529          166 KPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAE-MTNGGVDRS  243 (354)
Q Consensus       166 ~~~~~~~vlI~G~g~~G~~a~~~a~~~g~-~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~-~~~~~~dvv  243 (354)
                      .++++++||-+|+|. |..+..+++..|. .++++++.++ ..+.    ..-.++..+-.+....+.+.. +..+.+|+|
T Consensus        19 ~~~~~~~vLd~G~G~-G~~~~~l~~~~~~~~~v~~~D~~~-~~~~----~~~~~~~~d~~~~~~~~~~~~~~~~~~~D~i   92 (180)
T 1ej0_A           19 LFKPGMTVVDLGAAP-GGWSQYVVTQIGGKGRIIACDLLP-MDPI----VGVDFLQGDFRDELVMKALLERVGDSKVQVV   92 (180)
T ss_dssp             CCCTTCEEEEESCTT-CHHHHHHHHHHCTTCEEEEEESSC-CCCC----TTEEEEESCTTSHHHHHHHHHHHTTCCEEEE
T ss_pred             CCCCCCeEEEeCCCC-CHHHHHHHHHhCCCCeEEEEECcc-cccc----CcEEEEEcccccchhhhhhhccCCCCceeEE
Confidence            378899999999987 8888888888642 3999999887 3221    211222222222122223333 333489999


Q ss_pred             EEc-----ccC------------hHhHHHHHHHhhCCCceEEEEcC
Q 018529          244 VEC-----TGN------------IDNMISAFECVHDGWGVAVLVGV  272 (354)
Q Consensus       244 ~d~-----~g~------------~~~~~~~~~~l~~~~g~~v~~g~  272 (354)
                      +..     .+.            ...+..+.+.|+++ |.+++...
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~g-G~l~~~~~  137 (180)
T 1ej0_A           93 MSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPG-GSFVVKVF  137 (180)
T ss_dssp             EECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             EECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCC-cEEEEEEe
Confidence            973     333            25678888999997 99887543

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=96.44  E-value=0.0057  Score=51.51  Aligned_cols=76  Identities=12%  Similarity=0.016  Sum_probs=50.6

Q ss_pred             CCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEE-c--CChhhHHHH-Hhc-CCceEEcCCCCChhHHHHHHHHcCCCccEE
Q 018529          170 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGV-D--RSSKRFEEA-KKF-GVTDFVNTSEHDRPIQEVIAEMTNGGVDRS  243 (354)
Q Consensus       170 ~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v-~--~~~~~~~~~-~~l-g~~~v~~~~~~~~~~~~~i~~~~~~~~dvv  243 (354)
                      ++++||+|+ |++|.+.++.+...|+ +|+++ +  +++++.+.+ +++ +. .+.+..+- ..+.+.+.+.. +++|++
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~~~~r~~~~~~~~~~~~~~~-~~~~~~~v-~~~~~~~~~~~-g~iD~l   76 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGY-TVVCHDASFADAAERQRFESENPGT-IALAEQKP-ERLVDATLQHG-EAIDTI   76 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTC-EEEECCGGGGSHHHHHHHHHHSTTE-EECCCCCG-GGHHHHHGGGS-SCEEEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCcCCHHHHHHHHHHhCCC-cccCHHHH-HHHHHHHHHHc-CCCCEE
Confidence            467899987 9999999998888999 89998 6  888776654 334 33 23322221 23444443322 379999


Q ss_pred             EEcccC
Q 018529          244 VECTGN  249 (354)
Q Consensus       244 ~d~~g~  249 (354)
                      ++++|.
T Consensus        77 v~~Ag~   82 (244)
T 1zmo_A           77 VSNDYI   82 (244)
T ss_dssp             EECCCC
T ss_pred             EECCCc
Confidence            999873

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=96.43  E-value=0.011  Score=51.55  Aligned_cols=78  Identities=17%  Similarity=0.221  Sum_probs=50.4

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH-h--------cCCce-EE--cCCCCChhHHHHHHHH
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-K--------FGVTD-FV--NTSEHDRPIQEVIAEM  235 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~-~--------lg~~~-v~--~~~~~~~~~~~~i~~~  235 (354)
                      .++++||+|+ |.+|...+..+...|+ +|++++++.++.+.+. +        .+... .+  |..+. ..+.+.+.+.
T Consensus        17 ~~k~vlVTGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~-~~v~~~~~~~   94 (303)
T 1yxm_A           17 QGQVAIVTGGATGIGKAIVKELLELGS-NVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNE-EEVNNLVKST   94 (303)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCH-HHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCH-HHHHHHHHHH
Confidence            4689999987 9999999988888999 8999999887665432 1        13221 22  22221 1222223222


Q ss_pred             c--CCCccEEEEccc
Q 018529          236 T--NGGVDRSVECTG  248 (354)
Q Consensus       236 ~--~~~~dvv~d~~g  248 (354)
                      .  .+++|++|+++|
T Consensus        95 ~~~~g~id~li~~Ag  109 (303)
T 1yxm_A           95 LDTFGKINFLVNNGG  109 (303)
T ss_dssp             HHHHSCCCEEEECCC
T ss_pred             HHHcCCCCEEEECCC
Confidence            1  136999999988

>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A

Probab=96.42  E-value=0.0058  Score=54.77  Aligned_cols=93  Identities=16%  Similarity=0.169  Sum_probs=68.2

Q ss_pred             CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcc
Q 018529          168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  247 (354)
Q Consensus       168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~  247 (354)
                      -.|.+|.|+|.|.+|...++.++.+|.++|++.+++.++.+.+.++|+..+   .  +  +.+.++     ..|+|+.++
T Consensus       162 l~g~tvgIIG~G~IG~~vA~~l~~~G~~~V~~~d~~~~~~~~~~~~g~~~~---~--~--l~ell~-----~aDvV~l~~  229 (364)
T 2j6i_A          162 IEGKTIATIGAGRIGYRVLERLVPFNPKELLYYDYQALPKDAEEKVGARRV---E--N--IEELVA-----QADIVTVNA  229 (364)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHGGGCCSEEEEECSSCCCHHHHHHTTEEEC---S--S--HHHHHH-----TCSEEEECC
T ss_pred             CCCCEEEEECcCHHHHHHHHHHHhCCCcEEEEECCCccchhHHHhcCcEec---C--C--HHHHHh-----cCCEEEECC
Confidence            368899999999999999999999999339999988877777777885421   1  1  433332     379999988


Q ss_pred             cCh----HhH-HHHHHHhhCCCceEEEEcCC
Q 018529          248 GNI----DNM-ISAFECVHDGWGVAVLVGVP  273 (354)
Q Consensus       248 g~~----~~~-~~~~~~l~~~~g~~v~~g~~  273 (354)
                      +..    ..+ +..+..|+++ +.++.++..
T Consensus       230 P~t~~t~~li~~~~l~~mk~g-a~lIn~arG  259 (364)
T 2j6i_A          230 PLHAGTKGLINKELLSKFKKG-AWLVNTARG  259 (364)
T ss_dssp             CCSTTTTTCBCHHHHTTSCTT-EEEEECSCG
T ss_pred             CCChHHHHHhCHHHHhhCCCC-CEEEECCCC
Confidence            753    122 3566788886 888887753

>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*

Probab=96.42  E-value=0.036  Score=50.11  Aligned_cols=111  Identities=13%  Similarity=0.135  Sum_probs=70.9

Q ss_pred             hhhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh-----------cCC--ceEE--cC
Q 018529          157 GLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-----------FGV--TDFV--NT  221 (354)
Q Consensus       157 a~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~-----------lg~--~~v~--~~  221 (354)
                      .+..++....++++++||=+|+|. |.+++++|+..|..+|++++.+++..+.+++           +|.  ..+-  ..
T Consensus       161 ~i~~il~~l~l~~gd~VLDLGCGt-G~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~G  239 (438)
T 3uwp_A          161 LVAQMIDEIKMTDDDLFVDLGSGV-GQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERG  239 (438)
T ss_dssp             HHHHHHHHHCCCTTCEEEEESCTT-SHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEEC
T ss_pred             HHHHHHHhcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEEC
Confidence            344456778899999999999874 8888899988898679999999865554432           343  2332  11


Q ss_pred             CCCChhHHHHHHHHcCCCccEEEEccc--C---hHhHHHHHHHhhCCCceEEEEcCCC
Q 018529          222 SEHDRPIQEVIAEMTNGGVDRSVECTG--N---IDNMISAFECVHDGWGVAVLVGVPS  274 (354)
Q Consensus       222 ~~~~~~~~~~i~~~~~~~~dvv~d~~g--~---~~~~~~~~~~l~~~~g~~v~~g~~~  274 (354)
                      +-.+..+.+.   +  ..+|+||...-  .   ...+...++.|+++ |+++......
T Consensus       240 D~~~lp~~d~---~--~~aDVVf~Nn~~F~pdl~~aL~Ei~RvLKPG-GrIVssE~f~  291 (438)
T 3uwp_A          240 DFLSEEWRER---I--ANTSVIFVNNFAFGPEVDHQLKERFANMKEG-GRIVSSKPFA  291 (438)
T ss_dssp             CTTSHHHHHH---H--HTCSEEEECCTTCCHHHHHHHHHHHTTSCTT-CEEEESSCSS
T ss_pred             cccCCccccc---c--CCccEEEEcccccCchHHHHHHHHHHcCCCC-cEEEEeeccc
Confidence            1112112111   1  14899985211  1   13455677889997 9999876543

>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}

Probab=96.42  E-value=0.012  Score=52.41  Aligned_cols=89  Identities=17%  Similarity=0.201  Sum_probs=65.2

Q ss_pred             CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEccc
Q 018529          169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  248 (354)
Q Consensus       169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g  248 (354)
                      .|.+|.|+|.|.+|...++.++.+|. +|++.+++. +.+.+.+.|+..+   .  +  +.+.+++     .|+|+.+++
T Consensus       159 ~g~tvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~-~~~~~~~~g~~~~---~--~--l~ell~~-----aDiV~l~~P  224 (352)
T 3gg9_A          159 KGQTLGIFGYGKIGQLVAGYGRAFGM-NVLVWGREN-SKERARADGFAVA---E--S--KDALFEQ-----SDVLSVHLR  224 (352)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSHH-HHHHHHHTTCEEC---S--S--HHHHHHH-----CSEEEECCC
T ss_pred             CCCEEEEEeECHHHHHHHHHHHhCCC-EEEEECCCC-CHHHHHhcCceEe---C--C--HHHHHhh-----CCEEEEecc
Confidence            57899999999999999999999999 999998875 4455666776421   1  1  4444433     699998876


Q ss_pred             ChH----h-HHHHHHHhhCCCceEEEEcC
Q 018529          249 NID----N-MISAFECVHDGWGVAVLVGV  272 (354)
Q Consensus       249 ~~~----~-~~~~~~~l~~~~g~~v~~g~  272 (354)
                      ..+    . -...++.|+++ ..++.++.
T Consensus       225 lt~~t~~li~~~~l~~mk~g-ailIN~aR  252 (352)
T 3gg9_A          225 LNDETRSIITVADLTRMKPT-ALFVNTSR  252 (352)
T ss_dssp             CSTTTTTCBCHHHHTTSCTT-CEEEECSC
T ss_pred             CcHHHHHhhCHHHHhhCCCC-cEEEECCC
Confidence            322    1 23567788886 88888874

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=96.42  E-value=0.01  Score=51.08  Aligned_cols=79  Identities=19%  Similarity=0.240  Sum_probs=51.7

Q ss_pred             CCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-Hh----cCCce-EE--cCCCCChhHHHHHHHHcC-
Q 018529          168 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KK----FGVTD-FV--NTSEHDRPIQEVIAEMTN-  237 (354)
Q Consensus       168 ~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~~----lg~~~-v~--~~~~~~~~~~~~i~~~~~-  237 (354)
                      -.++++||+|+ |++|.+.++.+...|+ +|+.++++.++.+.+ ++    .+... .+  |..+. .++.+.+++... 
T Consensus        25 l~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~~  102 (277)
T 4fc7_A           25 LRDKVAFITGGGSGIGFRIAEIFMRHGC-HTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAP-PAVMAAVDQALKE  102 (277)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCH-HHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCH-HHHHHHHHHHHHH
Confidence            35789999987 9999999998888999 899999988765433 22    24332 22  33322 122222222211 


Q ss_pred             -CCccEEEEccc
Q 018529          238 -GGVDRSVECTG  248 (354)
Q Consensus       238 -~~~dvv~d~~g  248 (354)
                       +++|++++++|
T Consensus       103 ~g~id~lv~nAg  114 (277)
T 4fc7_A          103 FGRIDILINCAA  114 (277)
T ss_dssp             HSCCCEEEECCC
T ss_pred             cCCCCEEEECCc
Confidence             47999999988

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=96.42  E-value=0.0074  Score=51.00  Aligned_cols=75  Identities=21%  Similarity=0.347  Sum_probs=49.1

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceE-EcCCCCChhHHHHHHHHc--CCCccEEE
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHDRPIQEVIAEMT--NGGVDRSV  244 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v-~~~~~~~~~~~~~i~~~~--~~~~dvv~  244 (354)
                      .++++||+|+ |++|...+..+...|+ +|++++++++.    ++.++..+ .|..+. .++.+.+++..  .+++|+++
T Consensus         6 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~----~~~~~~~~~~D~~d~-~~~~~~~~~~~~~~g~id~lv   79 (250)
T 2fwm_X            6 SGKNVWVTGAGKGIGYATALAFVEAGA-KVTGFDQAFTQ----EQYPFATEVMDVADA-AQVAQVCQRLLAETERLDALV   79 (250)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCCCS----SCCSSEEEECCTTCH-HHHHHHHHHHHHHCSCCCEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCchhh----hcCCceEEEcCCCCH-HHHHHHHHHHHHHcCCCCEEE
Confidence            4678999987 9999999999889999 89988887653    23343221 233222 12333333221  24799999


Q ss_pred             EcccC
Q 018529          245 ECTGN  249 (354)
Q Consensus       245 d~~g~  249 (354)
                      +++|.
T Consensus        80 ~~Ag~   84 (250)
T 2fwm_X           80 NAAGI   84 (250)
T ss_dssp             ECCCC
T ss_pred             ECCCc
Confidence            99874

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=96.42  E-value=0.007  Score=51.95  Aligned_cols=78  Identities=14%  Similarity=0.207  Sum_probs=50.7

Q ss_pred             CeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH-hcCC---ceEEcCCCCC-hhHHHHHHHHcC--CCccE
Q 018529          171 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGV---TDFVNTSEHD-RPIQEVIAEMTN--GGVDR  242 (354)
Q Consensus       171 ~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~-~lg~---~~v~~~~~~~-~~~~~~i~~~~~--~~~dv  242 (354)
                      +++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+. ++..   ...+..+-.+ ..+.+.+.+...  +++|+
T Consensus        22 k~vlVTGas~gIG~aia~~La~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  100 (272)
T 2nwq_A           22 STLFITGATSGFGEACARRFAEAGW-SLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFATLRG  100 (272)
T ss_dssp             CEEEESSTTTSSHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGGSSCCE
T ss_pred             cEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            68999987 9999999998888999 8999999988766543 2321   1222222122 223333333322  36899


Q ss_pred             EEEcccC
Q 018529          243 SVECTGN  249 (354)
Q Consensus       243 v~d~~g~  249 (354)
                      +++++|.
T Consensus       101 lvnnAG~  107 (272)
T 2nwq_A          101 LINNAGL  107 (272)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999874

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=96.41  E-value=0.0088  Score=50.37  Aligned_cols=78  Identities=24%  Similarity=0.299  Sum_probs=50.1

Q ss_pred             CCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH-hc----CCc-eEE--cCCCCChhHHHHHHHHcC--C
Q 018529          170 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KF----GVT-DFV--NTSEHDRPIQEVIAEMTN--G  238 (354)
Q Consensus       170 ~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~-~l----g~~-~v~--~~~~~~~~~~~~i~~~~~--~  238 (354)
                      ++++||+|+ |.+|...+..+...|+ +|+++++++++.+.+. ++    +.. ..+  |..+. ..+.+.+++...  +
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~   79 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGD-RVAALDLSAETLEETARTHWHAYADKVLRVRADVADE-GDVNAAIAATMEQFG   79 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCH-HHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCH-HHHHHHHHHHHHHhC
Confidence            568999987 9999999988888998 8999999887765442 22    322 122  22221 122222322211  3


Q ss_pred             CccEEEEcccC
Q 018529          239 GVDRSVECTGN  249 (354)
Q Consensus       239 ~~dvv~d~~g~  249 (354)
                      ++|++++++|.
T Consensus        80 ~id~li~~Ag~   90 (250)
T 2cfc_A           80 AIDVLVNNAGI   90 (250)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999998873

>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}

Probab=96.41  E-value=0.025  Score=50.36  Aligned_cols=133  Identities=12%  Similarity=0.101  Sum_probs=81.6

Q ss_pred             eEEEEcCChhHHH-HHHHHHHc-CCcEEE-EEcCChhhHH-HHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcc
Q 018529          172 SVAVFGLGAVGLA-AAEGARIA-GASRII-GVDRSSKRFE-EAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  247 (354)
Q Consensus       172 ~vlI~G~g~~G~~-a~~~a~~~-g~~~vi-~v~~~~~~~~-~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~  247 (354)
                      ++.|+|+|.+|.. .+...+.. ++ .++ +.++++++.+ +++++|+..++..      +.+.+.+   ..+|+|+.|+
T Consensus        25 rigiIG~G~ig~~~~~~~~~~~~~~-~lvav~d~~~~~a~~~a~~~g~~~~y~d------~~ell~~---~~iDaV~I~t   94 (350)
T 4had_A           25 RFGIISTAKIGRDNVVPAIQDAENC-VVTAIASRDLTRAREMADRFSVPHAFGS------YEEMLAS---DVIDAVYIPL   94 (350)
T ss_dssp             EEEEESCCHHHHHTHHHHHHHCSSE-EEEEEECSSHHHHHHHHHHHTCSEEESS------HHHHHHC---SSCSEEEECS
T ss_pred             EEEEEcChHHHHHHHHHHHHhCCCe-EEEEEECCCHHHHHHHHHHcCCCeeeCC------HHHHhcC---CCCCEEEEeC
Confidence            6889999999975 35555544 66 555 4567777654 5677898766432      4443332   3799999999


Q ss_pred             cChHhHHHHHHHhhCCCceEEEEcCCCCCceeecch-hhhc--cccEEEEEeccCCCCCCCHHHHHHHHHccCC
Q 018529          248 GNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP-INVL--NERTLKGTFFGNYKPRTDLPSVVDMYMNKQL  318 (354)
Q Consensus       248 g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~-~~~~--~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~  318 (354)
                      +.....+.+..+|..  |+=|++.-+.....-.... ....  +++.+.-.+  ..+....++++-+++.+|.+
T Consensus        95 P~~~H~~~~~~al~a--GkhVl~EKPla~~~~ea~~l~~~a~~~~~~l~v~~--~~R~~p~~~~~k~~i~~G~i  164 (350)
T 4had_A           95 PTSQHIEWSIKAADA--GKHVVCEKPLALKAGDIDAVIAARDRNKVVVTEAY--MITYSPVWQKVRSLIDEGAI  164 (350)
T ss_dssp             CGGGHHHHHHHHHHT--TCEEEECSCCCSSGGGGHHHHHHHHHHTCCEEECC--GGGGSHHHHHHHHHHHTTTT
T ss_pred             CCchhHHHHHHHHhc--CCEEEEeCCcccchhhHHHHHHHHHHcCCceeEee--eeecCHHHHHhhHhhhcCCC
Confidence            987888899999987  6778887654211111110 1111  233332222  12223457788888888865

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=96.40  E-value=0.014  Score=50.68  Aligned_cols=78  Identities=13%  Similarity=0.202  Sum_probs=51.1

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH-hc----CCce-EE--cCCCCChhHHHHHHHHc--C
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KF----GVTD-FV--NTSEHDRPIQEVIAEMT--N  237 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~-~l----g~~~-v~--~~~~~~~~~~~~i~~~~--~  237 (354)
                      .+.++||+|+ |.+|...+..+...|+ +|++++++.++.+.+. ++    +... .+  |..+. ..+.+.+.+..  .
T Consensus        25 ~~k~vlITGasggiG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~  102 (302)
T 1w6u_A           25 QGKVAFITGGGTGLGKGMTTLLSSLGA-QCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDP-DMVQNTVSELIKVA  102 (302)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCH-HHHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCH-HHHHHHHHHHHHHc
Confidence            4678999987 9999999998888999 8999999887765432 22    4322 22  22221 12333332221  2


Q ss_pred             CCccEEEEccc
Q 018529          238 GGVDRSVECTG  248 (354)
Q Consensus       238 ~~~dvv~d~~g  248 (354)
                      +.+|++++++|
T Consensus       103 g~id~li~~Ag  113 (302)
T 1w6u_A          103 GHPNIVINNAA  113 (302)
T ss_dssp             CSCSEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            47899999987

>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B

Probab=96.39  E-value=0.017  Score=51.49  Aligned_cols=92  Identities=20%  Similarity=0.242  Sum_probs=66.4

Q ss_pred             CCCCeEEEEcCChhHHHHHHHHH-HcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEc
Q 018529          168 ERGSSVAVFGLGAVGLAAAEGAR-IAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  246 (354)
Q Consensus       168 ~~~~~vlI~G~g~~G~~a~~~a~-~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~  246 (354)
                      -.|.+|.|+|.|.+|...++.++ .+|. +|++.+++.++.+.+.++|+..+   .  +  +.+.+++     .|+|+.+
T Consensus       161 l~g~~vgIIG~G~IG~~vA~~l~~~~G~-~V~~~d~~~~~~~~~~~~g~~~~---~--~--l~ell~~-----aDvVil~  227 (348)
T 2w2k_A          161 PRGHVLGAVGLGAIQKEIARKAVHGLGM-KLVYYDVAPADAETEKALGAERV---D--S--LEELARR-----SDCVSVS  227 (348)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHHHTTCC-EEEEECSSCCCHHHHHHHTCEEC---S--S--HHHHHHH-----CSEEEEC
T ss_pred             CCCCEEEEEEECHHHHHHHHHHHHhcCC-EEEEECCCCcchhhHhhcCcEEe---C--C--HHHHhcc-----CCEEEEe
Confidence            45789999999999999999999 9999 89999998877776666776421   1  1  4333333     7999998


Q ss_pred             ccChH----hH-HHHHHHhhCCCceEEEEcCC
Q 018529          247 TGNID----NM-ISAFECVHDGWGVAVLVGVP  273 (354)
Q Consensus       247 ~g~~~----~~-~~~~~~l~~~~g~~v~~g~~  273 (354)
                      +....    .+ ...+..++++ ..++.++..
T Consensus       228 vp~~~~t~~li~~~~l~~mk~g-ailin~srg  258 (348)
T 2w2k_A          228 VPYMKLTHHLIDEAFFAAMKPG-SRIVNTARG  258 (348)
T ss_dssp             CCCSGGGTTCBCHHHHHHSCTT-EEEEECSCG
T ss_pred             CCCChHHHHHhhHHHHhcCCCC-CEEEECCCC
Confidence            86532    22 3566778886 777666543

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=96.39  E-value=0.006  Score=51.63  Aligned_cols=79  Identities=25%  Similarity=0.403  Sum_probs=50.0

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCC-hhhHHHH----HhcCCce-EE--cCCCCChhHHHHHHHHcC--
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRS-SKRFEEA----KKFGVTD-FV--NTSEHDRPIQEVIAEMTN--  237 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~-~~~~~~~----~~lg~~~-v~--~~~~~~~~~~~~i~~~~~--  237 (354)
                      .++++||+|+ |.+|...+..+...|+ +|++++++ .++.+.+    ++.+... .+  |..+. ..+.+.+++...  
T Consensus         6 ~~k~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~   83 (258)
T 3afn_B            6 KGKRVLITGSSQGIGLATARLFARAGA-KVGLHGRKAPANIDETIASMRADGGDAAFFAADLATS-EACQQLVDEFVAKF   83 (258)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSH-HHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCH-HHHHHHHHHHHHHc
Confidence            4678999987 9999999988888999 88888887 6555433    2234321 22  22221 123233332211  


Q ss_pred             CCccEEEEcccC
Q 018529          238 GGVDRSVECTGN  249 (354)
Q Consensus       238 ~~~dvv~d~~g~  249 (354)
                      +++|++|+++|.
T Consensus        84 g~id~vi~~Ag~   95 (258)
T 3afn_B           84 GGIDVLINNAGG   95 (258)
T ss_dssp             SSCSEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            379999999874

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=96.38  E-value=0.019  Score=48.69  Aligned_cols=78  Identities=19%  Similarity=0.231  Sum_probs=51.3

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH-h---cCCce-EE--cCCCCChhHHHHHHHH---cC
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-K---FGVTD-FV--NTSEHDRPIQEVIAEM---TN  237 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~-~---lg~~~-v~--~~~~~~~~~~~~i~~~---~~  237 (354)
                      .++++||+|+ |++|...++.+...|+ +|+++++++++.+.+. +   .+... .+  |..+. .++.+.+.+.   ..
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~~~~   81 (260)
T 2qq5_A            4 NGQVCVVTGASRGIGRGIALQLCKAGA-TVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQE-SEVRSLFEQVDREQQ   81 (260)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSH-HHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCH-HHHHHHHHHHHHhcC
Confidence            4678999987 9999999998888999 8999999887765432 2   24322 22  22221 2233333332   13


Q ss_pred             CCccEEEEccc
Q 018529          238 GGVDRSVECTG  248 (354)
Q Consensus       238 ~~~dvv~d~~g  248 (354)
                      +++|++++++|
T Consensus        82 g~id~lvnnAg   92 (260)
T 2qq5_A           82 GRLDVLVNNAY   92 (260)
T ss_dssp             TCCCEEEECCC
T ss_pred             CCceEEEECCc
Confidence            57999999984

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=96.38  E-value=0.0084  Score=51.34  Aligned_cols=80  Identities=18%  Similarity=0.260  Sum_probs=50.0

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcC-ChhhHHHH----HhcCCce-EEcCCCCC-hhHHHHHHHHc--CC
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR-SSKRFEEA----KKFGVTD-FVNTSEHD-RPIQEVIAEMT--NG  238 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~-~~~~~~~~----~~lg~~~-v~~~~~~~-~~~~~~i~~~~--~~  238 (354)
                      .++++||+|+ |++|...++.+...|+ +|+++++ +++..+.+    ++.+... ++..+-.+ .++.+.+++..  .+
T Consensus        28 ~~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g  106 (271)
T 4iin_A           28 TGKNVLITGASKGIGAEIAKTLASMGL-KVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQSDG  106 (271)
T ss_dssp             SCCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            5789999987 9999998888888999 8888887 44443332    3345432 22222222 12223333221  13


Q ss_pred             CccEEEEcccC
Q 018529          239 GVDRSVECTGN  249 (354)
Q Consensus       239 ~~dvv~d~~g~  249 (354)
                      ++|++++++|.
T Consensus       107 ~id~li~nAg~  117 (271)
T 4iin_A          107 GLSYLVNNAGV  117 (271)
T ss_dssp             SCCEEEECCCC
T ss_pred             CCCEEEECCCc
Confidence            79999999884

>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*

Probab=96.37  E-value=0.0095  Score=50.40  Aligned_cols=100  Identities=16%  Similarity=0.106  Sum_probs=65.2

Q ss_pred             CCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCceEEcCCCCChhHHHHHHH-HcCCCcc
Q 018529          167 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAE-MTNGGVD  241 (354)
Q Consensus       167 ~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~-~~~~~~d  241 (354)
                      ..++.+||=+|+|. |..++.+|+.....+|++++.+++..+++++    +|...+... ..+  +.+.... ...+.||
T Consensus        78 ~~~~~~vLDiG~G~-G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~-~~d--~~~~~~~~~~~~~fD  153 (249)
T 3g89_A           78 WQGPLRVLDLGTGA-GFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGARAL-WGR--AEVLAREAGHREAYA  153 (249)
T ss_dssp             CCSSCEEEEETCTT-TTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEE-ECC--HHHHTTSTTTTTCEE
T ss_pred             cCCCCEEEEEcCCC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEE-ECc--HHHhhcccccCCCce
Confidence            46788999898863 6667777877644499999999999888754    565432211 222  2221110 1124799


Q ss_pred             EEEEcc-cC-hHhHHHHHHHhhCCCceEEEEc
Q 018529          242 RSVECT-GN-IDNMISAFECVHDGWGVAVLVG  271 (354)
Q Consensus       242 vv~d~~-g~-~~~~~~~~~~l~~~~g~~v~~g  271 (354)
                      +|+... .. ...++.+.+.|+++ |+++++-
T Consensus       154 ~I~s~a~~~~~~ll~~~~~~Lkpg-G~l~~~~  184 (249)
T 3g89_A          154 RAVARAVAPLCVLSELLLPFLEVG-GAAVAMK  184 (249)
T ss_dssp             EEEEESSCCHHHHHHHHGGGEEEE-EEEEEEE
T ss_pred             EEEECCcCCHHHHHHHHHHHcCCC-eEEEEEe
Confidence            998643 22 35667788899997 9988764

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=96.37  E-value=0.0081  Score=53.69  Aligned_cols=48  Identities=25%  Similarity=0.338  Sum_probs=41.2

Q ss_pred             CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHH-HHHhcCCc
Q 018529          168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFE-EAKKFGVT  216 (354)
Q Consensus       168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~-~~~~lg~~  216 (354)
                      -+|++|+|.|.|.+|..+++.+...|+ +|++.+++.++.+ +++++|+.
T Consensus       171 L~GktV~V~G~G~VG~~~A~~L~~~Ga-kVvv~D~~~~~l~~~a~~~ga~  219 (364)
T 1leh_A          171 LEGLAVSVQGLGNVAKALCKKLNTEGA-KLVVTDVNKAAVSAAVAEEGAD  219 (364)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCCE
T ss_pred             CCcCEEEEECchHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHcCCE
Confidence            578999999999999999999999999 8889999988876 45556753

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=96.37  E-value=0.0068  Score=52.20  Aligned_cols=96  Identities=18%  Similarity=0.182  Sum_probs=60.5

Q ss_pred             eEEEEcC-ChhHHHHHHHHHHc--CCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEccc
Q 018529          172 SVAVFGL-GAVGLAAAEGARIA--GASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  248 (354)
Q Consensus       172 ~vlI~G~-g~~G~~a~~~a~~~--g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g  248 (354)
                      +|||+|+ |.+|...++.+...  |. +|++++++.++.+.+...++..+. .+-.+   .+.+.+... ++|+||.+++
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~~g~-~V~~~~r~~~~~~~l~~~~~~~~~-~D~~d---~~~l~~~~~-~~d~vi~~a~   75 (287)
T 2jl1_A            2 SIAVTGATGQLGGLVIQHLLKKVPAS-QIIAIVRNVEKASTLADQGVEVRH-GDYNQ---PESLQKAFA-GVSKLLFISG   75 (287)
T ss_dssp             CEEETTTTSHHHHHHHHHHTTTSCGG-GEEEEESCTTTTHHHHHTTCEEEE-CCTTC---HHHHHHHTT-TCSEEEECCC
T ss_pred             eEEEEcCCchHHHHHHHHHHHhCCCC-eEEEEEcCHHHHhHHhhcCCeEEE-eccCC---HHHHHHHHh-cCCEEEEcCC
Confidence            6899997 99999988888877  87 888888888776655555554332 21112   123444433 5899999987


Q ss_pred             Ch-------HhHHHHHHHhhCC-CceEEEEcCC
Q 018529          249 NI-------DNMISAFECVHDG-WGVAVLVGVP  273 (354)
Q Consensus       249 ~~-------~~~~~~~~~l~~~-~g~~v~~g~~  273 (354)
                      ..       .....+++.+... .+++++++..
T Consensus        76 ~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~  108 (287)
T 2jl1_A           76 PHYDNTLLIVQHANVVKAARDAGVKHIAYTGYA  108 (287)
T ss_dssp             CCSCHHHHHHHHHHHHHHHHHTTCSEEEEEEET
T ss_pred             CCcCchHHHHHHHHHHHHHHHcCCCEEEEECCC
Confidence            41       1223344444332 2488888764

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=96.36  E-value=0.013  Score=50.47  Aligned_cols=69  Identities=12%  Similarity=0.165  Sum_probs=50.6

Q ss_pred             CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-HhcCC---ceEEcCCCCChhHHHHHHHHcCCCccEEE
Q 018529          169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGV---TDFVNTSEHDRPIQEVIAEMTNGGVDRSV  244 (354)
Q Consensus       169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~~lg~---~~v~~~~~~~~~~~~~i~~~~~~~~dvv~  244 (354)
                      .+.+++|+|+|++|.+.+..+...|+.+|+++.|+.++.+.+ ++++.   ..+....+           +. ..+|+|+
T Consensus       125 ~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~~-----------l~-~~aDiII  192 (281)
T 3o8q_A          125 KGATILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQAFEQ-----------LK-QSYDVII  192 (281)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGG-----------CC-SCEEEEE
T ss_pred             cCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeEeeHHH-----------hc-CCCCEEE
Confidence            678999999999999999888889977899999998886554 44442   12332211           11 3689999


Q ss_pred             EcccC
Q 018529          245 ECTGN  249 (354)
Q Consensus       245 d~~g~  249 (354)
                      ++++.
T Consensus       193 naTp~  197 (281)
T 3o8q_A          193 NSTSA  197 (281)
T ss_dssp             ECSCC
T ss_pred             EcCcC
Confidence            99875

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=96.36  E-value=0.012  Score=50.49  Aligned_cols=80  Identities=15%  Similarity=0.099  Sum_probs=50.6

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcC-ChhhHHHHH-hc----CCce-E--EcCCCCC---hhHHHHHHHH
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR-SSKRFEEAK-KF----GVTD-F--VNTSEHD---RPIQEVIAEM  235 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~-~~~~~~~~~-~l----g~~~-v--~~~~~~~---~~~~~~i~~~  235 (354)
                      .++++||+|+ |++|...+..+...|+ +|+++++ ++++.+.+. ++    +... .  .|..+..   ..+.+.+.+.
T Consensus        10 ~~k~~lVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   88 (276)
T 1mxh_A           10 ECPAAVITGGARRIGHSIAVRLHQQGF-RVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCS   88 (276)
T ss_dssp             -CCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHHH
Confidence            4678999987 9999999988888999 8999988 777655432 22    4322 2  2333320   1222222222


Q ss_pred             c--CCCccEEEEcccC
Q 018529          236 T--NGGVDRSVECTGN  249 (354)
Q Consensus       236 ~--~~~~dvv~d~~g~  249 (354)
                      .  .+++|++++++|.
T Consensus        89 ~~~~g~id~lv~nAg~  104 (276)
T 1mxh_A           89 FRAFGRCDVLVNNASA  104 (276)
T ss_dssp             HHHHSCCCEEEECCCC
T ss_pred             HHhcCCCCEEEECCCC
Confidence            1  1379999999873

>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*

Probab=96.35  E-value=0.015  Score=50.69  Aligned_cols=101  Identities=15%  Similarity=0.070  Sum_probs=66.5

Q ss_pred             CCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcC--------CceEEcCCCCChhHHHHHHHHcCC
Q 018529          167 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG--------VTDFVNTSEHDRPIQEVIAEMTNG  238 (354)
Q Consensus       167 ~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg--------~~~v~~~~~~~~~~~~~i~~~~~~  238 (354)
                      ..++.+||++|+|. |..+..+++..+..+|++++.+++-.+.+++.-        ..++-.. ..+  ..+.+.....+
T Consensus        93 ~~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~-~~D--~~~~~~~~~~~  168 (304)
T 3bwc_A           93 HPKPERVLIIGGGD-GGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVR-VGD--GLAFVRQTPDN  168 (304)
T ss_dssp             SSSCCEEEEEECTT-SHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEE-ESC--HHHHHHSSCTT
T ss_pred             CCCCCeEEEEcCCC-CHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEE-ECc--HHHHHHhccCC
Confidence            35678999999864 667777777655559999999998888877632        1111111 112  44434332334


Q ss_pred             CccEEEEcccC----------hHhHHHHHHHhhCCCceEEEEcC
Q 018529          239 GVDRSVECTGN----------IDNMISAFECVHDGWGVAVLVGV  272 (354)
Q Consensus       239 ~~dvv~d~~g~----------~~~~~~~~~~l~~~~g~~v~~g~  272 (354)
                      .||+|+.....          .+.++.+.+.|+++ |.+++...
T Consensus       169 ~fDvIi~d~~~~~~~~~~l~~~~~l~~~~~~Lkpg-G~lv~~~~  211 (304)
T 3bwc_A          169 TYDVVIIDTTDPAGPASKLFGEAFYKDVLRILKPD-GICCNQGE  211 (304)
T ss_dssp             CEEEEEEECC---------CCHHHHHHHHHHEEEE-EEEEEEEC
T ss_pred             ceeEEEECCCCccccchhhhHHHHHHHHHHhcCCC-cEEEEecC
Confidence            89999853311          36688899999997 99887643

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=96.35  E-value=0.03  Score=46.12  Aligned_cols=75  Identities=15%  Similarity=0.120  Sum_probs=55.2

Q ss_pred             eEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH-hcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcccCh
Q 018529          172 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI  250 (354)
Q Consensus       172 ~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~-~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~~  250 (354)
                      +|+|+|+|.+|...++.+...|. .|+++++++++.+.+. ++|... +..+..+   .+.+++..-..+|+|+-+++..
T Consensus         2 ~iiIiG~G~~G~~la~~L~~~g~-~v~vid~~~~~~~~l~~~~~~~~-i~gd~~~---~~~l~~a~i~~ad~vi~~~~~d   76 (218)
T 3l4b_C            2 KVIIIGGETTAYYLARSMLSRKY-GVVIINKDRELCEEFAKKLKATI-IHGDGSH---KEILRDAEVSKNDVVVILTPRD   76 (218)
T ss_dssp             CEEEECCHHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHHSSSEE-EESCTTS---HHHHHHHTCCTTCEEEECCSCH
T ss_pred             EEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHcCCeE-EEcCCCC---HHHHHhcCcccCCEEEEecCCc
Confidence            58899999999999999999998 8999999999988764 466643 3333332   2234444334799999999885


Q ss_pred             H
Q 018529          251 D  251 (354)
Q Consensus       251 ~  251 (354)
                      .
T Consensus        77 ~   77 (218)
T 3l4b_C           77 E   77 (218)
T ss_dssp             H
T ss_pred             H
Confidence            3

>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A

Probab=96.35  E-value=0.015  Score=51.34  Aligned_cols=90  Identities=22%  Similarity=0.209  Sum_probs=65.0

Q ss_pred             CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEccc
Q 018529          169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  248 (354)
Q Consensus       169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g  248 (354)
                      .|.+|.|+|.|.+|...++.++..|. +|++.+++.++.+.+.++|....      +  +.+.+++     .|+|+.+++
T Consensus       154 ~g~~vgIIG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~~~g~~~~------~--l~e~l~~-----aDvVi~~vp  219 (330)
T 2gcg_A          154 TQSTVGIIGLGRIGQAIARRLKPFGV-QRFLYTGRQPRPEEAAEFQAEFV------S--TPELAAQ-----SDFIVVACS  219 (330)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHGGGTC-CEEEEESSSCCHHHHHTTTCEEC------C--HHHHHHH-----CSEEEECCC
T ss_pred             CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCcchhHHHhcCceeC------C--HHHHHhh-----CCEEEEeCC
Confidence            47799999999999999999999999 89999988776666666765321      1  4333332     799999986


Q ss_pred             ChH----hH-HHHHHHhhCCCceEEEEcCC
Q 018529          249 NID----NM-ISAFECVHDGWGVAVLVGVP  273 (354)
Q Consensus       249 ~~~----~~-~~~~~~l~~~~g~~v~~g~~  273 (354)
                      ...    .+ ...++.++++ ..++.++..
T Consensus       220 ~~~~t~~~i~~~~~~~mk~g-ailIn~srg  248 (330)
T 2gcg_A          220 LTPATEGLCNKDFFQKMKET-AVFINISRG  248 (330)
T ss_dssp             CCTTTTTCBSHHHHHHSCTT-CEEEECSCG
T ss_pred             CChHHHHhhCHHHHhcCCCC-cEEEECCCC
Confidence            532    22 3566778886 777666543

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=96.35  E-value=0.011  Score=50.10  Aligned_cols=78  Identities=23%  Similarity=0.262  Sum_probs=49.2

Q ss_pred             CCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhh--HHHH-Hh---cCCce-EE--cCCCCChhHHHHHHHHc--C
Q 018529          170 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR--FEEA-KK---FGVTD-FV--NTSEHDRPIQEVIAEMT--N  237 (354)
Q Consensus       170 ~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~--~~~~-~~---lg~~~-v~--~~~~~~~~~~~~i~~~~--~  237 (354)
                      ++++||+|+ |++|...++.+...|+ +|+++++++++  .+.+ ++   .+... .+  |..+. .++.+.+.+..  .
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~~~   79 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGF-DIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDK-ANFDSAIDEAAEKL   79 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTC-EEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCH-HHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCH-HHHHHHHHHHHHHh
Confidence            578999987 9999998888888899 89999888776  3332 22   24322 22  33222 12222222221  1


Q ss_pred             CCccEEEEcccC
Q 018529          238 GGVDRSVECTGN  249 (354)
Q Consensus       238 ~~~dvv~d~~g~  249 (354)
                      +++|++++++|.
T Consensus        80 g~iD~lv~nAg~   91 (258)
T 3a28_C           80 GGFDVLVNNAGI   91 (258)
T ss_dssp             TCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999874

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=96.35  E-value=0.013  Score=50.24  Aligned_cols=79  Identities=22%  Similarity=0.330  Sum_probs=49.9

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhh-------H----HHHHhcCCceE---EcCCCCChhHHHHHH
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR-------F----EEAKKFGVTDF---VNTSEHDRPIQEVIA  233 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~-------~----~~~~~lg~~~v---~~~~~~~~~~~~~i~  233 (354)
                      .++++||+|+ |++|.+.++.+...|+ +|+.++++.++       .    +.+++.+....   .|..+. .++.+.++
T Consensus         5 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~v~~~~~   82 (274)
T 3e03_A            5 SGKTLFITGASRGIGLAIALRAARDGA-NVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREE-DQVRAAVA   82 (274)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCH-HHHHHHHH
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCH-HHHHHHHH
Confidence            4789999987 9999999888888999 89999887653       1    12233344322   233222 12222222


Q ss_pred             HHcC--CCccEEEEcccC
Q 018529          234 EMTN--GGVDRSVECTGN  249 (354)
Q Consensus       234 ~~~~--~~~dvv~d~~g~  249 (354)
                      +...  +++|++++++|.
T Consensus        83 ~~~~~~g~iD~lvnnAG~  100 (274)
T 3e03_A           83 ATVDTFGGIDILVNNASA  100 (274)
T ss_dssp             HHHHHHSCCCEEEECCCC
T ss_pred             HHHHHcCCCCEEEECCCc
Confidence            2211  479999999884

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=96.34  E-value=0.022  Score=49.07  Aligned_cols=79  Identities=22%  Similarity=0.264  Sum_probs=49.4

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcC-ChhhHHHH----Hhc-CCceE-E--cCCCCChhHHHHHHHHc--
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR-SSKRFEEA----KKF-GVTDF-V--NTSEHDRPIQEVIAEMT--  236 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~-~~~~~~~~----~~l-g~~~v-~--~~~~~~~~~~~~i~~~~--  236 (354)
                      .++++||+|+ |++|...+..+...|+ +|+.+++ +.++.+.+    ++. +.... +  |..+. .++.+.+++..  
T Consensus        24 ~~k~~lVTGas~GIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~-~~v~~~~~~~~~~  101 (281)
T 3v2h_A           24 MTKTAVITGSTSGIGLAIARTLAKAGA-NIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKP-SEIADMMAMVADR  101 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCH-HHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCH-HHHHHHHHHHHHH
Confidence            4688999987 9999999998889999 8888888 55544433    222 32222 2  22221 12222232221  


Q ss_pred             CCCccEEEEcccC
Q 018529          237 NGGVDRSVECTGN  249 (354)
Q Consensus       237 ~~~~dvv~d~~g~  249 (354)
                      .+++|++++++|.
T Consensus       102 ~g~iD~lv~nAg~  114 (281)
T 3v2h_A          102 FGGADILVNNAGV  114 (281)
T ss_dssp             TSSCSEEEECCCC
T ss_pred             CCCCCEEEECCCC
Confidence            1479999999884

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=96.33  E-value=0.0084  Score=50.58  Aligned_cols=75  Identities=24%  Similarity=0.279  Sum_probs=48.8

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHc--CCCccEEEE
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMT--NGGVDRSVE  245 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~--~~~~dvv~d  245 (354)
                      .++++||+|+ |++|...++.+...|+ +|+++++++++.+.+.  +  ...|..+.+ .+.+.+++..  .+++|++++
T Consensus        14 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~--~--~~~D~~~~~-~~~~~~~~~~~~~g~id~lv~   87 (247)
T 1uzm_A           14 VSRSVLVTGGNRGIGLAIAQRLAADGH-KVAVTHRGSGAPKGLF--G--VEVDVTDSD-AVDRAFTAVEEHQGPVEVLVS   87 (247)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSSCCCTTSE--E--EECCTTCHH-HHHHHHHHHHHHHSSCSEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHHHHHhc--C--eeccCCCHH-HHHHHHHHHHHHcCCCCEEEE
Confidence            4678999987 9999999998888999 8999888776543221  1  223333321 2222222221  146899999


Q ss_pred             cccC
Q 018529          246 CTGN  249 (354)
Q Consensus       246 ~~g~  249 (354)
                      ++|.
T Consensus        88 ~Ag~   91 (247)
T 1uzm_A           88 NAGL   91 (247)
T ss_dssp             ECSC
T ss_pred             CCCC
Confidence            9874

>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}

Probab=96.33  E-value=0.021  Score=50.39  Aligned_cols=134  Identities=14%  Similarity=0.153  Sum_probs=75.6

Q ss_pred             eEEEEcCChhHHHH-HHHHHHcCCcEEEEEcCChhhHHH-HHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcccC
Q 018529          172 SVAVFGLGAVGLAA-AEGARIAGASRIIGVDRSSKRFEE-AKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN  249 (354)
Q Consensus       172 ~vlI~G~g~~G~~a-~~~a~~~g~~~vi~v~~~~~~~~~-~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~  249 (354)
                      +|.|+|+|.+|... +..++..+.+.+.+.++++++.+. .+++|...++  .+    +.+.+.   ...+|+|+.+++.
T Consensus         2 ~vgiiG~G~~g~~~~~~~l~~~~~~~vav~d~~~~~~~~~~~~~g~~~~~--~~----~~~~l~---~~~~D~V~i~tp~   72 (332)
T 2glx_A            2 RWGLIGASTIAREWVIGAIRATGGEVVSMMSTSAERGAAYATENGIGKSV--TS----VEELVG---DPDVDAVYVSTTN   72 (332)
T ss_dssp             EEEEESCCHHHHHTHHHHHHHTTCEEEEEECSCHHHHHHHHHHTTCSCCB--SC----HHHHHT---CTTCCEEEECSCG
T ss_pred             eEEEEcccHHHHHhhhHHhhcCCCeEEEEECCCHHHHHHHHHHcCCCccc--CC----HHHHhc---CCCCCEEEEeCCh
Confidence            58899999999875 543333677334466788877654 5567764221  11    333222   1269999999988


Q ss_pred             hHhHHHHHHHhhCCCceEEEEcCCCCCceeec-chhhhc--cccEEEEEeccCCCCCCCHHHHHHHHHccCC
Q 018529          250 IDNMISAFECVHDGWGVAVLVGVPSKDAVFMT-KPINVL--NERTLKGTFFGNYKPRTDLPSVVDMYMNKQL  318 (354)
Q Consensus       250 ~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~-~~~~~~--~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~  318 (354)
                      ....+.+..++..  |+-+++..+........ ......  +++.+.-.+  ..+....++.+.+++.+|.+
T Consensus        73 ~~h~~~~~~al~~--Gk~v~~ekP~~~~~~~~~~l~~~a~~~g~~~~~~~--~~r~~p~~~~~~~~i~~g~i  140 (332)
T 2glx_A           73 ELHREQTLAAIRA--GKHVLCEKPLAMTLEDAREMVVAAREAGVVLGTNH--HLRNAAAHRAMRDAIAEGRI  140 (332)
T ss_dssp             GGHHHHHHHHHHT--TCEEEECSSSCSSHHHHHHHHHHHHHHTCCEEECC--CGGGSHHHHHHHHHHHTTTT
T ss_pred             hHhHHHHHHHHHC--CCeEEEeCCCcCCHHHHHHHHHHHHHcCCEEEEee--hhhcCHHHHHHHHHHHcCCC
Confidence            7777888888877  56566654321110000 011111  233332211  12222347778888888865

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=96.33  E-value=0.02  Score=49.36  Aligned_cols=34  Identities=32%  Similarity=0.315  Sum_probs=30.0

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCC
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRS  203 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~  203 (354)
                      .++++||+|+ +++|.+.++.+...|+ +|++++++
T Consensus        10 ~~k~~lVTGas~gIG~aia~~la~~G~-~V~~~~~~   44 (286)
T 3uve_A           10 EGKVAFVTGAARGQGRSHAVRLAQEGA-DIIAVDIC   44 (286)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEecc
Confidence            5789999987 9999999988889999 88888776

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=96.32  E-value=0.016  Score=49.86  Aligned_cols=80  Identities=15%  Similarity=0.189  Sum_probs=50.4

Q ss_pred             CCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcC-ChhhHHHH----HhcCCceE---EcCCCCC--hhHHHHHHHHc
Q 018529          168 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR-SSKRFEEA----KKFGVTDF---VNTSEHD--RPIQEVIAEMT  236 (354)
Q Consensus       168 ~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~-~~~~~~~~----~~lg~~~v---~~~~~~~--~~~~~~i~~~~  236 (354)
                      ..++++||+|+ |++|.+.++.+...|+ +|+++++ ++++.+.+    ++.|....   .|..+.+  +.+.+.+.+..
T Consensus        27 ~~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  105 (280)
T 4da9_A           27 KARPVAIVTGGRRGIGLGIARALAASGF-DIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEF  105 (280)
T ss_dssp             CCCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHH
T ss_pred             cCCCEEEEecCCCHHHHHHHHHHHHCCC-eEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            45789999987 9999999998889999 8888874 66554432    33444322   2333322  12223333322


Q ss_pred             CCCccEEEEcccC
Q 018529          237 NGGVDRSVECTGN  249 (354)
Q Consensus       237 ~~~~dvv~d~~g~  249 (354)
                       +++|++++++|.
T Consensus       106 -g~iD~lvnnAg~  117 (280)
T 4da9_A          106 -GRIDCLVNNAGI  117 (280)
T ss_dssp             -SCCCEEEEECC-
T ss_pred             -CCCCEEEECCCc
Confidence             379999999875

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=96.32  E-value=0.008  Score=51.01  Aligned_cols=79  Identities=18%  Similarity=0.239  Sum_probs=49.8

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcC-ChhhHHHH----HhcCCce-EE--cCCCCChhHHHHHHHHcC--
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR-SSKRFEEA----KKFGVTD-FV--NTSEHDRPIQEVIAEMTN--  237 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~-~~~~~~~~----~~lg~~~-v~--~~~~~~~~~~~~i~~~~~--  237 (354)
                      .++++||+|+ |.+|...+..+...|+ +|+++++ ++++.+.+    ++.+... ++  |..+. .++.+.+++...  
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~   83 (261)
T 1gee_A            6 EGKVVVITGSSTGLGKSMAIRFATEKA-KVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVE-SDVINLVQSAIKEF   83 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSH-HHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCH-HHHHHHHHHHHHHc
Confidence            4678999987 9999999888888899 8888888 76655433    2234322 22  22221 122222332211  


Q ss_pred             CCccEEEEcccC
Q 018529          238 GGVDRSVECTGN  249 (354)
Q Consensus       238 ~~~dvv~d~~g~  249 (354)
                      +++|++|+++|.
T Consensus        84 g~id~li~~Ag~   95 (261)
T 1gee_A           84 GKLDVMINNAGL   95 (261)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            369999999873

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=96.31  E-value=0.0098  Score=50.71  Aligned_cols=79  Identities=24%  Similarity=0.437  Sum_probs=50.9

Q ss_pred             CCCeEEEEcC-C-hhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH----hcCCc--eEE--cCCCCChhHHHHHHHHc--
Q 018529          169 RGSSVAVFGL-G-AVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVT--DFV--NTSEHDRPIQEVIAEMT--  236 (354)
Q Consensus       169 ~~~~vlI~G~-g-~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~----~lg~~--~v~--~~~~~~~~~~~~i~~~~--  236 (354)
                      .++++||+|+ | ++|...+..+...|+ +|+.++++.++.+.+.    +.+..  ..+  |..+. ..+.+.+++..  
T Consensus        21 ~~k~vlITGasg~GIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~   98 (266)
T 3o38_A           21 KGKVVLVTAAAGTGIGSTTARRALLEGA-DVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTST-EAVDALITQTVEK   98 (266)
T ss_dssp             TTCEEEESSCSSSSHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCH-HHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCH-HHHHHHHHHHHHH
Confidence            5789999987 6 799998888888899 8999999987765432    22321  222  22221 12222222221  


Q ss_pred             CCCccEEEEcccC
Q 018529          237 NGGVDRSVECTGN  249 (354)
Q Consensus       237 ~~~~dvv~d~~g~  249 (354)
                      .+++|++++++|.
T Consensus        99 ~g~id~li~~Ag~  111 (266)
T 3o38_A           99 AGRLDVLVNNAGL  111 (266)
T ss_dssp             HSCCCEEEECCCC
T ss_pred             hCCCcEEEECCCc
Confidence            1379999999884

>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17

Probab=96.31  E-value=0.0092  Score=51.31  Aligned_cols=97  Identities=20%  Similarity=0.130  Sum_probs=65.7

Q ss_pred             CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhc------CC--ceEEcCCCCChhHHHHHHHHcCCCc
Q 018529          169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF------GV--TDFVNTSEHDRPIQEVIAEMTNGGV  240 (354)
Q Consensus       169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~l------g~--~~v~~~~~~~~~~~~~i~~~~~~~~  240 (354)
                      .+.+||++|+|. |..+..+++..+..+|++++.+++-.+.+++.      +.  .++-.... +  ..+.+.. ..+.+
T Consensus        75 ~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~-D--~~~~l~~-~~~~f  149 (275)
T 1iy9_A           75 NPEHVLVVGGGD-GGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVD-D--GFMHIAK-SENQY  149 (275)
T ss_dssp             SCCEEEEESCTT-CHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEES-C--SHHHHHT-CCSCE
T ss_pred             CCCEEEEECCch-HHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEEC-c--HHHHHhh-CCCCe
Confidence            568999999864 66777788776766999999999988888762      11  12211111 1  2233433 23479


Q ss_pred             cEEEEcccC----------hHhHHHHHHHhhCCCceEEEEc
Q 018529          241 DRSVECTGN----------IDNMISAFECVHDGWGVAVLVG  271 (354)
Q Consensus       241 dvv~d~~g~----------~~~~~~~~~~l~~~~g~~v~~g  271 (354)
                      |+|+.-...          .+.++.+.+.|+++ |.++...
T Consensus       150 D~Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~pg-G~lv~~~  189 (275)
T 1iy9_A          150 DVIMVDSTEPVGPAVNLFTKGFYAGIAKALKED-GIFVAQT  189 (275)
T ss_dssp             EEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEE-EEEEEEC
T ss_pred             eEEEECCCCCCCcchhhhHHHHHHHHHHhcCCC-cEEEEEc
Confidence            999864322          36889999999997 9988764

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=96.30  E-value=0.014  Score=51.48  Aligned_cols=72  Identities=22%  Similarity=0.285  Sum_probs=46.9

Q ss_pred             eEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcccC
Q 018529          172 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN  249 (354)
Q Consensus       172 ~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~  249 (354)
                      +|||+|+ |.+|...+..+...|. +|++++++.++.+.+...++..+ ..+-.+   .+.+.+... ++|+||.+++.
T Consensus        15 ~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~~~~~~~~-~~Dl~d---~~~~~~~~~-~~d~vih~a~~   87 (342)
T 2x4g_A           15 KYAVLGATGLLGHHAARAIRAAGH-DLVLIHRPSSQIQRLAYLEPECR-VAEMLD---HAGLERALR-GLDGVIFSAGY   87 (342)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTC-EEEEEECTTSCGGGGGGGCCEEE-ECCTTC---HHHHHHHTT-TCSEEEEC---
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCC-EEEEEecChHhhhhhccCCeEEE-EecCCC---HHHHHHHHc-CCCEEEECCcc
Confidence            7999997 9999999998888898 89999888766544433344332 221112   123444433 59999999874

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=96.29  E-value=0.027  Score=49.39  Aligned_cols=91  Identities=15%  Similarity=0.140  Sum_probs=61.9

Q ss_pred             CeEEEEcCChhHHHHHHHHHHcCCc-EEEEEcCChhhHHHHHhcCCc-eEEcCCCCChhHHHHHHHHcCCCccEEEEccc
Q 018529          171 SSVAVFGLGAVGLAAAEGARIAGAS-RIIGVDRSSKRFEEAKKFGVT-DFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  248 (354)
Q Consensus       171 ~~vlI~G~g~~G~~a~~~a~~~g~~-~vi~v~~~~~~~~~~~~lg~~-~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g  248 (354)
                      .+|.|+|+|.+|...++.++..|.. .|++.++++++.+.++++|.. .......   ++  .+     ...|+||.|+.
T Consensus        34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~~~~~---~~--~~-----~~aDvVilavp  103 (314)
T 3ggo_A           34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIA---KV--ED-----FSPDFVMLSSP  103 (314)
T ss_dssp             SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCTT---GG--GG-----GCCSEEEECSC
T ss_pred             CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcchhcCCHH---HH--hh-----ccCCEEEEeCC
Confidence            5799999999999999888888864 799999999999999988863 2221111   00  01     25899999987


Q ss_pred             ChH---hHHHHHHHhhCCCceEEEEcC
Q 018529          249 NID---NMISAFECVHDGWGVAVLVGV  272 (354)
Q Consensus       249 ~~~---~~~~~~~~l~~~~g~~v~~g~  272 (354)
                      ...   .+..+...++++ ..++.++.
T Consensus       104 ~~~~~~vl~~l~~~l~~~-~iv~d~~S  129 (314)
T 3ggo_A          104 VRTFREIAKKLSYILSED-ATVTDQGS  129 (314)
T ss_dssp             GGGHHHHHHHHHHHSCTT-CEEEECCS
T ss_pred             HHHHHHHHHHHhhccCCC-cEEEECCC
Confidence            633   233344455564 55555543

>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A

Probab=96.29  E-value=0.0093  Score=53.82  Aligned_cols=91  Identities=13%  Similarity=0.050  Sum_probs=66.7

Q ss_pred             CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEccc
Q 018529          169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  248 (354)
Q Consensus       169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g  248 (354)
                      .|.+|.|+|.|.||...++.++.+|. +|++.+++.++.+..+++|+..+   .  +  +.+.++     ..|+|+.++.
T Consensus       190 ~gktvGIIGlG~IG~~vA~~l~a~G~-~V~~~d~~~~~~~~~~~~G~~~~---~--~--l~ell~-----~aDvV~l~~P  256 (393)
T 2nac_A          190 EAMHVGTVAAGRIGLAVLRRLAPFDV-HLHYTDRHRLPESVEKELNLTWH---A--T--REDMYP-----VCDVVTLNCP  256 (393)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHGGGTC-EEEEECSSCCCHHHHHHHTCEEC---S--S--HHHHGG-----GCSEEEECSC
T ss_pred             CCCEEEEEeECHHHHHHHHHHHhCCC-EEEEEcCCccchhhHhhcCceec---C--C--HHHHHh-----cCCEEEEecC
Confidence            57899999999999999999999999 89999988776677777786421   1  1  333222     3799999876


Q ss_pred             Ch----HhH-HHHHHHhhCCCceEEEEcCC
Q 018529          249 NI----DNM-ISAFECVHDGWGVAVLVGVP  273 (354)
Q Consensus       249 ~~----~~~-~~~~~~l~~~~g~~v~~g~~  273 (354)
                      ..    ..+ ...+..|+++ ..++.++..
T Consensus       257 lt~~t~~li~~~~l~~mk~g-ailIN~aRG  285 (393)
T 2nac_A          257 LHPETEHMINDETLKLFKRG-AYIVNTARG  285 (393)
T ss_dssp             CCTTTTTCBSHHHHTTSCTT-EEEEECSCG
T ss_pred             CchHHHHHhhHHHHhhCCCC-CEEEECCCc
Confidence            32    223 4566788886 778777653

>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*

Probab=96.28  E-value=0.032  Score=49.80  Aligned_cols=134  Identities=13%  Similarity=0.117  Sum_probs=81.4

Q ss_pred             CeEEEEcCChhHHHHHHHHHHc--CCcEEEEEcCChhhHHH-HHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcc
Q 018529          171 SSVAVFGLGAVGLAAAEGARIA--GASRIIGVDRSSKRFEE-AKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  247 (354)
Q Consensus       171 ~~vlI~G~g~~G~~a~~~a~~~--g~~~vi~v~~~~~~~~~-~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~  247 (354)
                      -+|.|+|+|.+|...+..++..  +.+.+.+.++++++.+. ++++|+ .++  .+    +.+.+.+   ..+|+|+.|+
T Consensus        14 ~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~~~~~~~-~~~--~~----~~~ll~~---~~~D~V~i~t   83 (354)
T 3q2i_A           14 IRFALVGCGRIANNHFGALEKHADRAELIDVCDIDPAALKAAVERTGA-RGH--AS----LTDMLAQ---TDADIVILTT   83 (354)
T ss_dssp             EEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHHCC-EEE--SC----HHHHHHH---CCCSEEEECS
T ss_pred             ceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcCCHHHHHHHHHHcCC-cee--CC----HHHHhcC---CCCCEEEECC
Confidence            4789999999998877777766  66334466788887654 466786 332  22    4444433   3689999999


Q ss_pred             cChHhHHHHHHHhhCCCceEEEEcCCCCCceeec-chhhhc--cccEE-EEEeccCCCCCCCHHHHHHHHHccCCC
Q 018529          248 GNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMT-KPINVL--NERTL-KGTFFGNYKPRTDLPSVVDMYMNKQLE  319 (354)
Q Consensus       248 g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~-~~~~~~--~~~~i-~g~~~~~~~~~~~~~~~~~~~~~~~~~  319 (354)
                      ......+.+..++..  |+-+++..+.....-.. ......  +++.+ .++.   .+....++.+.+++.+|.+.
T Consensus        84 p~~~h~~~~~~al~~--gk~v~~EKP~a~~~~~~~~l~~~a~~~g~~~~v~~~---~r~~p~~~~~k~~i~~g~iG  154 (354)
T 3q2i_A           84 PSGLHPTQSIECSEA--GFHVMTEKPMATRWEDGLEMVKAADKAKKHLFVVKQ---NRRNATLQLLKRAMQEKRFG  154 (354)
T ss_dssp             CGGGHHHHHHHHHHT--TCEEEECSSSCSSHHHHHHHHHHHHHHTCCEEECCG---GGGSHHHHHHHHHHHTTTTC
T ss_pred             CcHHHHHHHHHHHHC--CCCEEEeCCCcCCHHHHHHHHHHHHHhCCeEEEEEc---ccCCHHHHHHHHHHhcCCCC
Confidence            987778888888877  56677765431111010 011111  23333 2322   22223577888888888653

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=96.27  E-value=0.0092  Score=51.30  Aligned_cols=96  Identities=13%  Similarity=0.167  Sum_probs=58.8

Q ss_pred             eEEEEcC-ChhHHHHHHHHHHc--CCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEccc
Q 018529          172 SVAVFGL-GAVGLAAAEGARIA--GASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  248 (354)
Q Consensus       172 ~vlI~G~-g~~G~~a~~~a~~~--g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g  248 (354)
                      +|||+|+ |.+|...++.+...  |. +|+++++++++.+.+...++..+. .+-.+  . +.+.+... ++|+||.+++
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~-~D~~d--~-~~~~~~~~-~~d~vi~~a~   74 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPAS-QIVAIVRNPAKAQALAAQGITVRQ-ADYGD--E-AALTSALQ-GVEKLLLISS   74 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGG-GEEEEESCTTTCHHHHHTTCEEEE-CCTTC--H-HHHHHHTT-TCSEEEECC-
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCc-eEEEEEcChHhhhhhhcCCCeEEE-cCCCC--H-HHHHHHHh-CCCEEEEeCC
Confidence            4899997 99999998888877  87 888888887776555555554332 21112  1 23444433 5899999987


Q ss_pred             Ch-----HhHHHHHHHhhCC-CceEEEEcCC
Q 018529          249 NI-----DNMISAFECVHDG-WGVAVLVGVP  273 (354)
Q Consensus       249 ~~-----~~~~~~~~~l~~~-~g~~v~~g~~  273 (354)
                      ..     .....+++.+... .+++++++..
T Consensus        75 ~~~~~~~~~~~~l~~a~~~~~~~~~v~~Ss~  105 (286)
T 2zcu_A           75 SEVGQRAPQHRNVINAAKAAGVKFIAYTSLL  105 (286)
T ss_dssp             -------CHHHHHHHHHHHHTCCEEEEEEET
T ss_pred             CCchHHHHHHHHHHHHHHHcCCCEEEEECCC
Confidence            42     1233444444332 2578888764

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=96.27  E-value=0.037  Score=47.18  Aligned_cols=80  Identities=16%  Similarity=0.173  Sum_probs=48.0

Q ss_pred             CCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEc-CChhhHHHH----HhcCCc-eEE--cCCCCC--hhHHHHHHHHc
Q 018529          168 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVD-RSSKRFEEA----KKFGVT-DFV--NTSEHD--RPIQEVIAEMT  236 (354)
Q Consensus       168 ~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~-~~~~~~~~~----~~lg~~-~v~--~~~~~~--~~~~~~i~~~~  236 (354)
                      ..++++||+|+ |++|...++.+...|+ +|++++ ++.++.+..    ++.+.. ..+  |..+.+  +.+.+.+.+..
T Consensus        23 ~~~k~vlITGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  101 (269)
T 3gk3_A           23 QAKRVAFVTGGMGGLGAAISRRLHDAGM-AVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADF  101 (269)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHTTTC-EEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            35678999987 9999999888888999 787776 554443332    223332 222  332221  11222232222


Q ss_pred             CCCccEEEEcccC
Q 018529          237 NGGVDRSVECTGN  249 (354)
Q Consensus       237 ~~~~dvv~d~~g~  249 (354)
                       +++|++++++|.
T Consensus       102 -g~id~li~nAg~  113 (269)
T 3gk3_A          102 -GKVDVLINNAGI  113 (269)
T ss_dssp             -SCCSEEEECCCC
T ss_pred             -CCCCEEEECCCc
Confidence             379999999874

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=96.27  E-value=0.046  Score=46.87  Aligned_cols=91  Identities=15%  Similarity=0.191  Sum_probs=62.6

Q ss_pred             CeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcccCh
Q 018529          171 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI  250 (354)
Q Consensus       171 ~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~~  250 (354)
                      .+|||+|+|.+|...+..+...|. .|+++++++++.+.+...++..+. .+-.+  +    .   -.++|+||.+++..
T Consensus         6 ~~ilVtGaG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~-~D~~d--~----~---~~~~d~vi~~a~~~   74 (286)
T 3ius_A            6 GTLLSFGHGYTARVLSRALAPQGW-RIIGTSRNPDQMEAIRASGAEPLL-WPGEE--P----S---LDGVTHLLISTAPD   74 (286)
T ss_dssp             CEEEEETCCHHHHHHHHHHGGGTC-EEEEEESCGGGHHHHHHTTEEEEE-SSSSC--C----C---CTTCCEEEECCCCB
T ss_pred             CcEEEECCcHHHHHHHHHHHHCCC-EEEEEEcChhhhhhHhhCCCeEEE-ecccc--c----c---cCCCCEEEECCCcc
Confidence            579999999999999999988898 999999999988887776664432 11111  1    1   24799999998642


Q ss_pred             ----HhHHHHHHHhhC---CCceEEEEcC
Q 018529          251 ----DNMISAFECVHD---GWGVAVLVGV  272 (354)
Q Consensus       251 ----~~~~~~~~~l~~---~~g~~v~~g~  272 (354)
                          ......++.+..   +..++++++.
T Consensus        75 ~~~~~~~~~l~~a~~~~~~~~~~~v~~Ss  103 (286)
T 3ius_A           75 SGGDPVLAALGDQIAARAAQFRWVGYLST  103 (286)
T ss_dssp             TTBCHHHHHHHHHHHHTGGGCSEEEEEEE
T ss_pred             ccccHHHHHHHHHHHhhcCCceEEEEeec
Confidence                223444444432   1257887764

>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41

Probab=96.26  E-value=0.0088  Score=50.77  Aligned_cols=100  Identities=17%  Similarity=0.259  Sum_probs=67.4

Q ss_pred             hhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhc----CCce--EEcCCCCChhHHHHHHH
Q 018529          161 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF----GVTD--FVNTSEHDRPIQEVIAE  234 (354)
Q Consensus       161 l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~l----g~~~--v~~~~~~~~~~~~~i~~  234 (354)
                      +.....++++.+||-+|+| .|..+..+++.. . +|++++.+++..+.+++.    |...  ++..+-.+  +     .
T Consensus        29 l~~~l~~~~~~~vLDiGcG-~G~~~~~l~~~~-~-~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~--l-----~   98 (260)
T 1vl5_A           29 LMQIAALKGNEEVLDVATG-GGHVANAFAPFV-K-KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQ--M-----P   98 (260)
T ss_dssp             HHHHHTCCSCCEEEEETCT-TCHHHHHHGGGS-S-EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-C--C-----C
T ss_pred             HHHHhCCCCCCEEEEEeCC-CCHHHHHHHHhC-C-EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHh--C-----C
Confidence            3445567899999999997 577777777764 4 999999999888877653    3322  12111111  0     0


Q ss_pred             HcCCCccEEEEcccC------hHhHHHHHHHhhCCCceEEEEc
Q 018529          235 MTNGGVDRSVECTGN------IDNMISAFECVHDGWGVAVLVG  271 (354)
Q Consensus       235 ~~~~~~dvv~d~~g~------~~~~~~~~~~l~~~~g~~v~~g  271 (354)
                      +..+.||+|+....-      ...+..+.+.|+++ |++++..
T Consensus        99 ~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~Lkpg-G~l~~~~  140 (260)
T 1vl5_A           99 FTDERFHIVTCRIAAHHFPNPASFVSEAYRVLKKG-GQLLLVD  140 (260)
T ss_dssp             SCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             CCCCCEEEEEEhhhhHhcCCHHHHHHHHHHHcCCC-CEEEEEE
Confidence            122479999976432      35688899999997 9988764

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=96.26  E-value=0.0065  Score=51.98  Aligned_cols=75  Identities=25%  Similarity=0.300  Sum_probs=47.5

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCC--hhHHHHHHHHcCCCccEEEE
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHD--RPIQEVIAEMTNGGVDRSVE  245 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~--~~~~~~i~~~~~~~~dvv~d  245 (354)
                      .++++||+|+ |++|.+.++.+...|+ +|+.++++.++.+....+    ..|..+.+  ..+.+.+.+.. +++|++++
T Consensus        27 ~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~----~~Dv~~~~~~~~~~~~~~~~~-g~iD~lvn  100 (266)
T 3uxy_A           27 EGKVALVTGAAGGIGGAVVTALRAAGA-RVAVADRAVAGIAADLHL----PGDLREAAYADGLPGAVAAGL-GRLDIVVN  100 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEECSSCCTTSCCSEEC----CCCTTSHHHHHHHHHHHHHHH-SCCCEEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHhhhcc----CcCCCCHHHHHHHHHHHHHhc-CCCCEEEE
Confidence            4788999987 9999999988888999 899998876544222111    11222211  11222222222 47999999


Q ss_pred             cccC
Q 018529          246 CTGN  249 (354)
Q Consensus       246 ~~g~  249 (354)
                      ++|.
T Consensus       101 nAg~  104 (266)
T 3uxy_A          101 NAGV  104 (266)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            9884

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=96.26  E-value=0.017  Score=50.78  Aligned_cols=80  Identities=21%  Similarity=0.278  Sum_probs=49.9

Q ss_pred             CCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCC------------hhhHHH----HHhcCCceE-E--cCCCCChh
Q 018529          168 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRS------------SKRFEE----AKKFGVTDF-V--NTSEHDRP  227 (354)
Q Consensus       168 ~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~------------~~~~~~----~~~lg~~~v-~--~~~~~~~~  227 (354)
                      -.++++||+|+ |++|.+.++.+...|+ +|++++++            .++.+.    +++.+.... +  |..+. .+
T Consensus        44 l~gk~~lVTGas~GIG~aia~~la~~G~-~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~-~~  121 (317)
T 3oec_A           44 LQGKVAFITGAARGQGRTHAVRLAQDGA-DIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDL-AS  121 (317)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCH-HH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCC-eEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCH-HH
Confidence            35789999987 9999999998889999 88888765            333332    233454322 2  32221 12


Q ss_pred             HHHHHHHHcC--CCccEEEEcccC
Q 018529          228 IQEVIAEMTN--GGVDRSVECTGN  249 (354)
Q Consensus       228 ~~~~i~~~~~--~~~dvv~d~~g~  249 (354)
                      +.+.+++...  +++|++++++|.
T Consensus       122 v~~~~~~~~~~~g~iD~lVnnAg~  145 (317)
T 3oec_A          122 LQAVVDEALAEFGHIDILVSNVGI  145 (317)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCC
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCC
Confidence            2222322211  479999999884

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=96.26  E-value=0.01  Score=50.29  Aligned_cols=76  Identities=21%  Similarity=0.363  Sum_probs=48.3

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCce-EE--cCCCCC--hhHHHHHHHHcCCCccE
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD-FV--NTSEHD--RPIQEVIAEMTNGGVDR  242 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~-v~--~~~~~~--~~~~~~i~~~~~~~~dv  242 (354)
                      .++++||+|+ |++|.+.++.+...|+ +|++++++.++  ..++++... .+  |..+.+  +.+.+.+.+  .+++|+
T Consensus         8 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~--~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~--~g~id~   82 (257)
T 3tl3_A            8 RDAVAVVTGGASGLGLATTKRLLDAGA-QVVVLDIRGED--VVADLGDRARFAAADVTDEAAVASALDLAET--MGTLRI   82 (257)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHHTC-EEEEEESSCHH--HHHHTCTTEEEEECCTTCHHHHHHHHHHHHH--HSCEEE
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCchHH--HHHhcCCceEEEECCCCCHHHHHHHHHHHHH--hCCCCE
Confidence            4678999987 9999998888888899 88888875443  344455432 22  332221  112233333  247999


Q ss_pred             EEEcccC
Q 018529          243 SVECTGN  249 (354)
Q Consensus       243 v~d~~g~  249 (354)
                      +++++|.
T Consensus        83 lv~nAg~   89 (257)
T 3tl3_A           83 VVNCAGT   89 (257)
T ss_dssp             EEECGGG
T ss_pred             EEECCCC
Confidence            9999883

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=96.25  E-value=0.033  Score=49.13  Aligned_cols=77  Identities=17%  Similarity=0.206  Sum_probs=47.6

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHH----HHHh-cCCc-eEEcCCCCCh-hHHHHHHHHcCCCc
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFE----EAKK-FGVT-DFVNTSEHDR-PIQEVIAEMTNGGV  240 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~----~~~~-lg~~-~v~~~~~~~~-~~~~~i~~~~~~~~  240 (354)
                      .+.+|||+|+ |.+|...++.+...|+ +|++++++.++.+    .+.+ .+.. .++..+-.+. .+.+.++.   +++
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---~~~   79 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGY-DVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDA---HPI   79 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHH---SCC
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCC-cEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhc---cCC
Confidence            4568999987 9999999999998999 8999887654322    2221 1221 2222221221 22222222   379


Q ss_pred             cEEEEcccC
Q 018529          241 DRSVECTGN  249 (354)
Q Consensus       241 dvv~d~~g~  249 (354)
                      |+||++++.
T Consensus        80 d~vih~A~~   88 (341)
T 3enk_A           80 TAAIHFAAL   88 (341)
T ss_dssp             CEEEECCCC
T ss_pred             cEEEECccc
Confidence            999999874

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=96.25  E-value=0.021  Score=49.92  Aligned_cols=74  Identities=15%  Similarity=0.200  Sum_probs=46.2

Q ss_pred             CCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceE-EcCCCCChhHHHHHHHHcCCCccEEE
Q 018529          167 PERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHDRPIQEVIAEMTNGGVDRSV  244 (354)
Q Consensus       167 ~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v-~~~~~~~~~~~~~i~~~~~~~~dvv~  244 (354)
                      -++..+|||+|+ |.+|...++.+...|. .|++++++.++ +.   +++..+ .|..+. ..+.+.++.   +++|+||
T Consensus         9 ~~~~~~vlVTGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~-~~---l~~~~~~~Dl~d~-~~~~~~~~~---~~~d~vi   79 (321)
T 2pk3_A            9 HHGSMRALITGVAGFVGKYLANHLTEQNV-EVFGTSRNNEA-KL---PNVEMISLDIMDS-QRVKKVISD---IKPDYIF   79 (321)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCTTC-CC---TTEEEEECCTTCH-HHHHHHHHH---HCCSEEE
T ss_pred             ccCcceEEEECCCChHHHHHHHHHHHCCC-EEEEEecCCcc-cc---ceeeEEECCCCCH-HHHHHHHHh---cCCCEEE
Confidence            356788999987 9999999998888898 89999887665 21   233222 122211 122222222   2689999


Q ss_pred             EcccC
Q 018529          245 ECTGN  249 (354)
Q Consensus       245 d~~g~  249 (354)
                      .+++.
T Consensus        80 h~A~~   84 (321)
T 2pk3_A           80 HLAAK   84 (321)
T ss_dssp             ECCSC
T ss_pred             EcCcc
Confidence            99874

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=96.24  E-value=0.02  Score=51.91  Aligned_cols=85  Identities=25%  Similarity=0.234  Sum_probs=53.6

Q ss_pred             hcCC-CCCCeEEEEcC-ChhHHHHHHHHHH-cCCcEEEEEcCChhh----------------HHHHHhcCCceE-EcCCC
Q 018529          164 VAKP-ERGSSVAVFGL-GAVGLAAAEGARI-AGASRIIGVDRSSKR----------------FEEAKKFGVTDF-VNTSE  223 (354)
Q Consensus       164 ~~~~-~~~~~vlI~G~-g~~G~~a~~~a~~-~g~~~vi~v~~~~~~----------------~~~~~~lg~~~v-~~~~~  223 (354)
                      ...+ +.++++||+|+ +++|.+.+..+-. .|+ +|++++++.+.                .+.+++.|.... +..+-
T Consensus        54 ~~~~~~~gKvaLVTGASsGIG~AiA~~LA~~~GA-~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dv  132 (422)
T 3s8m_A           54 RGVRNDGPKKVLVIGASSGYGLASRITAAFGFGA-DTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDA  132 (422)
T ss_dssp             TCCCSSSCSEEEEESCSSHHHHHHHHHHHHHHCC-EEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCT
T ss_pred             ccccccCCCEEEEECCChHHHHHHHHHHHHhCCC-EEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecC
Confidence            3445 45778899987 8999987776666 899 88888776432                144556675432 22222


Q ss_pred             CCh----hHHHHHHHHcCCCccEEEEcccC
Q 018529          224 HDR----PIQEVIAEMTNGGVDRSVECTGN  249 (354)
Q Consensus       224 ~~~----~~~~~i~~~~~~~~dvv~d~~g~  249 (354)
                      .+.    .+.+.+.+..+|++|++++++|.
T Consensus       133 td~~~v~~~v~~i~~~~~G~IDiLVNNAG~  162 (422)
T 3s8m_A          133 FSDAARAQVIELIKTEMGGQVDLVVYSLAS  162 (422)
T ss_dssp             TSHHHHHHHHHHHHHHSCSCEEEEEECCCC
T ss_pred             CCHHHHHHHHHHHHHHcCCCCCEEEEcCcc
Confidence            221    23344444443679999998875

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=96.24  E-value=0.011  Score=50.50  Aligned_cols=79  Identities=24%  Similarity=0.235  Sum_probs=49.1

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcC-ChhhHHHH----HhcCCceE-E--cCCCCC--hhHHHHHHHHcC
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR-SSKRFEEA----KKFGVTDF-V--NTSEHD--RPIQEVIAEMTN  237 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~-~~~~~~~~----~~lg~~~v-~--~~~~~~--~~~~~~i~~~~~  237 (354)
                      .++++||+|+ |++|.+.++.+...|+ +|+.+++ ++++.+.+    ++.+.... +  |..+.+  ..+.+.+.+.. 
T Consensus        27 ~~k~vlVTGas~gIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~-  104 (269)
T 4dmm_A           27 TDRIALVTGASRGIGRAIALELAAAGA-KVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERW-  104 (269)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc-
Confidence            5788999987 9999999988888999 7777766 55544433    33444322 2  222221  11222222222 


Q ss_pred             CCccEEEEcccC
Q 018529          238 GGVDRSVECTGN  249 (354)
Q Consensus       238 ~~~dvv~d~~g~  249 (354)
                      +++|++++++|.
T Consensus       105 g~id~lv~nAg~  116 (269)
T 4dmm_A          105 GRLDVLVNNAGI  116 (269)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999874

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=96.24  E-value=0.022  Score=47.74  Aligned_cols=73  Identities=21%  Similarity=0.167  Sum_probs=48.8

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHc--CCcEEEEEcCChhhHHHHHhcCCceE-EcCCCCChhHHHHHHHHcCCCccEEE
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIA--GASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHDRPIQEVIAEMTNGGVDRSV  244 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~--g~~~vi~v~~~~~~~~~~~~lg~~~v-~~~~~~~~~~~~~i~~~~~~~~dvv~  244 (354)
                      .+.+|||+|+ |.+|...++.+...  |. +|+++++++++.+.+ .-++..+ .|..+     .+.+.++.. ++|+||
T Consensus         3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~-~V~~~~r~~~~~~~~-~~~~~~~~~D~~d-----~~~~~~~~~-~~d~vi   74 (253)
T 1xq6_A            3 NLPTVLVTGASGRTGQIVYKKLKEGSDKF-VAKGLVRSAQGKEKI-GGEADVFIGDITD-----ADSINPAFQ-GIDALV   74 (253)
T ss_dssp             SCCEEEEESTTSHHHHHHHHHHHHTTTTC-EEEEEESCHHHHHHT-TCCTTEEECCTTS-----HHHHHHHHT-TCSEEE
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHhcCCCc-EEEEEEcCCCchhhc-CCCeeEEEecCCC-----HHHHHHHHc-CCCEEE
Confidence            4678999987 99999999888888  77 899999988766543 1223222 22222     123333332 589999


Q ss_pred             EcccC
Q 018529          245 ECTGN  249 (354)
Q Consensus       245 d~~g~  249 (354)
                      +++|.
T Consensus        75 ~~a~~   79 (253)
T 1xq6_A           75 ILTSA   79 (253)
T ss_dssp             ECCCC
T ss_pred             Eeccc
Confidence            98873

>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}

Probab=96.23  E-value=0.029  Score=49.06  Aligned_cols=96  Identities=15%  Similarity=0.097  Sum_probs=65.4

Q ss_pred             CeEEEEcCChhHHHHHHHHHHc-CCcEEEEEcCChhhHHHHHhc-CC---ceEEcCCCCChhHHHHHHHHcCCCccEEEE
Q 018529          171 SSVAVFGLGAVGLAAAEGARIA-GASRIIGVDRSSKRFEEAKKF-GV---TDFVNTSEHDRPIQEVIAEMTNGGVDRSVE  245 (354)
Q Consensus       171 ~~vlI~G~g~~G~~a~~~a~~~-g~~~vi~v~~~~~~~~~~~~l-g~---~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d  245 (354)
                      .+||++|+|. |.++..+++.. +. +|++++.+++-.+.+++. +.   .++-.. ..+  ..+.++....+.||+||.
T Consensus        91 ~rVLdIG~G~-G~la~~la~~~p~~-~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~-~~D--a~~~l~~~~~~~fDvIi~  165 (317)
T 3gjy_A           91 LRITHLGGGA-CTMARYFADVYPQS-RNTVVELDAELARLSREWFDIPRAPRVKIR-VDD--ARMVAESFTPASRDVIIR  165 (317)
T ss_dssp             CEEEEESCGG-GHHHHHHHHHSTTC-EEEEEESCHHHHHHHHHHSCCCCTTTEEEE-ESC--HHHHHHTCCTTCEEEEEE
T ss_pred             CEEEEEECCc-CHHHHHHHHHCCCc-EEEEEECCHHHHHHHHHhccccCCCceEEE-ECc--HHHHHhhccCCCCCEEEE
Confidence            3899999864 77788888865 66 899999999999998773 32   111111 112  445555544458999986


Q ss_pred             cc-c---------ChHhHHHHHHHhhCCCceEEEEcC
Q 018529          246 CT-G---------NIDNMISAFECVHDGWGVAVLVGV  272 (354)
Q Consensus       246 ~~-g---------~~~~~~~~~~~l~~~~g~~v~~g~  272 (354)
                      -. .         ..+.++.+.+.|+++ |.++....
T Consensus       166 D~~~~~~~~~~L~t~efl~~~~r~Lkpg-Gvlv~~~~  201 (317)
T 3gjy_A          166 DVFAGAITPQNFTTVEFFEHCHRGLAPG-GLYVANCG  201 (317)
T ss_dssp             CCSTTSCCCGGGSBHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             CCCCccccchhhhHHHHHHHHHHhcCCC-cEEEEEec
Confidence            32 1         135788999999997 98875543

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=96.23  E-value=0.016  Score=51.02  Aligned_cols=81  Identities=26%  Similarity=0.311  Sum_probs=50.2

Q ss_pred             CCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCC----------hhhHHH----HHhcCCceEEcCCC-CC-hhHHH
Q 018529          168 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRS----------SKRFEE----AKKFGVTDFVNTSE-HD-RPIQE  230 (354)
Q Consensus       168 ~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~----------~~~~~~----~~~lg~~~v~~~~~-~~-~~~~~  230 (354)
                      -.++++||+|+ |++|.+.+..+...|+ +|++++++          .++.+.    +++.+....+..-+ .+ .++.+
T Consensus        25 l~gk~vlVTGas~GIG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~  103 (322)
T 3qlj_A           25 VDGRVVIVTGAGGGIGRAHALAFAAEGA-RVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAG  103 (322)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHH
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHH
Confidence            35789999987 9999998888888899 89998876          333332    33345433222212 22 12222


Q ss_pred             HHHHHcC--CCccEEEEcccC
Q 018529          231 VIAEMTN--GGVDRSVECTGN  249 (354)
Q Consensus       231 ~i~~~~~--~~~dvv~d~~g~  249 (354)
                      .+.+...  +++|++++++|.
T Consensus       104 ~~~~~~~~~g~iD~lv~nAg~  124 (322)
T 3qlj_A          104 LIQTAVETFGGLDVLVNNAGI  124 (322)
T ss_dssp             HHHHHHHHHSCCCEEECCCCC
T ss_pred             HHHHHHHHcCCCCEEEECCCC
Confidence            2222211  379999999884

>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1

Probab=96.21  E-value=0.019  Score=50.41  Aligned_cols=91  Identities=12%  Similarity=0.171  Sum_probs=65.7

Q ss_pred             CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcC-ChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEc
Q 018529          168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDR-SSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  246 (354)
Q Consensus       168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~-~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~  246 (354)
                      -.|.+|.|+|.|.+|...++.++.+|. +|++.++ +.++ +.+.++|+..    .+ +  +.+.+.     ..|+|+.+
T Consensus       144 l~g~~vgIIG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~~-~~~~~~g~~~----~~-~--l~ell~-----~aDvVil~  209 (320)
T 1gdh_A          144 LDNKTLGIYGFGSIGQALAKRAQGFDM-DIDYFDTHRASS-SDEASYQATF----HD-S--LDSLLS-----VSQFFSLN  209 (320)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSCCCH-HHHHHHTCEE----CS-S--HHHHHH-----HCSEEEEC
T ss_pred             CCCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCcCh-hhhhhcCcEE----cC-C--HHHHHh-----hCCEEEEe
Confidence            367899999999999999999999998 9999998 7766 3556677642    11 1  434333     27999998


Q ss_pred             ccChH----hH-HHHHHHhhCCCceEEEEcCC
Q 018529          247 TGNID----NM-ISAFECVHDGWGVAVLVGVP  273 (354)
Q Consensus       247 ~g~~~----~~-~~~~~~l~~~~g~~v~~g~~  273 (354)
                      +...+    .+ ...++.++++ ..++.++..
T Consensus       210 ~p~~~~t~~~i~~~~l~~mk~g-ailIn~arg  240 (320)
T 1gdh_A          210 APSTPETRYFFNKATIKSLPQG-AIVVNTARG  240 (320)
T ss_dssp             CCCCTTTTTCBSHHHHTTSCTT-EEEEECSCG
T ss_pred             ccCchHHHhhcCHHHHhhCCCC-cEEEECCCC
Confidence            87422    22 3466788886 888877653

>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*

Probab=96.20  E-value=0.0084  Score=52.93  Aligned_cols=90  Identities=19%  Similarity=0.207  Sum_probs=66.9

Q ss_pred             CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEccc
Q 018529          169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  248 (354)
Q Consensus       169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g  248 (354)
                      .|.+|.|+|.|.+|...++.++.+|. +|++.+++.++.+...++|+..    .  +  +.+.+++     .|+|+.++.
T Consensus       144 ~g~tvGIIG~G~IG~~vA~~l~~~G~-~V~~~d~~~~~~~~~~~~g~~~----~--~--l~ell~~-----aDvV~l~~P  209 (330)
T 4e5n_A          144 DNATVGFLGMGAIGLAMADRLQGWGA-TLQYHEAKALDTQTEQRLGLRQ----V--A--CSELFAS-----SDFILLALP  209 (330)
T ss_dssp             TTCEEEEECCSHHHHHHHHHTTTSCC-EEEEECSSCCCHHHHHHHTEEE----C--C--HHHHHHH-----CSEEEECCC
T ss_pred             CCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEECCCCCcHhHHHhcCcee----C--C--HHHHHhh-----CCEEEEcCC
Confidence            57899999999999999999999999 8999998876666666777532    1  1  4444433     699998876


Q ss_pred             ChH----hH-HHHHHHhhCCCceEEEEcCC
Q 018529          249 NID----NM-ISAFECVHDGWGVAVLVGVP  273 (354)
Q Consensus       249 ~~~----~~-~~~~~~l~~~~g~~v~~g~~  273 (354)
                      ..+    .+ ...++.|+++ ..++.++..
T Consensus       210 ~t~~t~~li~~~~l~~mk~g-ailIN~arg  238 (330)
T 4e5n_A          210 LNADTLHLVNAELLALVRPG-ALLVNPCRG  238 (330)
T ss_dssp             CSTTTTTCBCHHHHTTSCTT-EEEEECSCG
T ss_pred             CCHHHHHHhCHHHHhhCCCC-cEEEECCCC
Confidence            321    22 3677788886 888887754

>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}

Probab=96.20  E-value=0.0062  Score=50.60  Aligned_cols=95  Identities=18%  Similarity=0.090  Sum_probs=67.4

Q ss_pred             CCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCc-eEEcCCCCChhHHHHHHHHc-CCCccEEE
Q 018529          167 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT-DFVNTSEHDRPIQEVIAEMT-NGGVDRSV  244 (354)
Q Consensus       167 ~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~-~v~~~~~~~~~~~~~i~~~~-~~~~dvv~  244 (354)
                      ++++.+||-+|+|. |..+..+++. |. +|++++.+++..+.+++.... .++..+-.+     .+ .+. .+.||+|+
T Consensus        46 ~~~~~~vLDiGcG~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~-----~~-~~~~~~~fD~v~  116 (226)
T 3m33_A           46 LTPQTRVLEAGCGH-GPDAARFGPQ-AA-RWAAYDFSPELLKLARANAPHADVYEWNGKG-----EL-PAGLGAPFGLIV  116 (226)
T ss_dssp             CCTTCEEEEESCTT-SHHHHHHGGG-SS-EEEEEESCHHHHHHHHHHCTTSEEEECCSCS-----SC-CTTCCCCEEEEE
T ss_pred             CCCCCeEEEeCCCC-CHHHHHHHHc-CC-EEEEEECCHHHHHHHHHhCCCceEEEcchhh-----cc-CCcCCCCEEEEE
Confidence            46789999999875 7777777777 77 999999999999988775221 222211101     00 012 34799999


Q ss_pred             EcccChHhHHHHHHHhhCCCceEEEEc
Q 018529          245 ECTGNIDNMISAFECVHDGWGVAVLVG  271 (354)
Q Consensus       245 d~~g~~~~~~~~~~~l~~~~g~~v~~g  271 (354)
                      ........+..+.+.|+++ |+++..+
T Consensus       117 ~~~~~~~~l~~~~~~Lkpg-G~l~~~~  142 (226)
T 3m33_A          117 SRRGPTSVILRLPELAAPD-AHFLYVG  142 (226)
T ss_dssp             EESCCSGGGGGHHHHEEEE-EEEEEEE
T ss_pred             eCCCHHHHHHHHHHHcCCC-cEEEEeC
Confidence            8866667889999999997 9998443

>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}

Probab=96.18  E-value=0.023  Score=49.12  Aligned_cols=73  Identities=19%  Similarity=0.218  Sum_probs=52.9

Q ss_pred             eEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcccChH
Q 018529          172 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNID  251 (354)
Q Consensus       172 ~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~~~  251 (354)
                      +|.|+|.|.+|...++.+...|. .|++.++++++.+.+.+.|+..   ..+    ..+.++.     .|+||.++..+.
T Consensus         3 ~I~iiG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~---~~~----~~~~~~~-----advvi~~v~~~~   69 (287)
T 3pdu_A            3 TYGFLGLGIMGGPMAANLVRAGF-DVTVWNRNPAKCAPLVALGARQ---ASS----PAEVCAA-----CDITIAMLADPA   69 (287)
T ss_dssp             CEEEECCSTTHHHHHHHHHHHTC-CEEEECSSGGGGHHHHHHTCEE---CSC----HHHHHHH-----CSEEEECCSSHH
T ss_pred             eEEEEccCHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCee---cCC----HHHHHHc-----CCEEEEEcCCHH
Confidence            68899999999988888888898 8999999999988888777532   111    3333322     688888887754


Q ss_pred             hHHHHH
Q 018529          252 NMISAF  257 (354)
Q Consensus       252 ~~~~~~  257 (354)
                      .++..+
T Consensus        70 ~~~~v~   75 (287)
T 3pdu_A           70 AAREVC   75 (287)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            444444

>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}

Probab=96.18  E-value=0.032  Score=49.50  Aligned_cols=133  Identities=17%  Similarity=0.213  Sum_probs=79.0

Q ss_pred             eEEEEcCChhHHHHHHHHHHc-CCcEEE-EEcCChhhHHH-HHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEccc
Q 018529          172 SVAVFGLGAVGLAAAEGARIA-GASRII-GVDRSSKRFEE-AKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  248 (354)
Q Consensus       172 ~vlI~G~g~~G~~a~~~a~~~-g~~~vi-~v~~~~~~~~~-~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g  248 (354)
                      +|.|+|+|.+|...+..++.. +. .++ +.++++++.+. ++++|+ .++  .+    +.+.+.   ...+|+|+.|++
T Consensus         6 rvgiiG~G~~g~~~~~~l~~~~~~-~l~av~d~~~~~~~~~a~~~g~-~~~--~~----~~~~l~---~~~~D~V~i~tp   74 (344)
T 3euw_A            6 RIALFGAGRIGHVHAANIAANPDL-ELVVIADPFIEGAQRLAEANGA-EAV--AS----PDEVFA---RDDIDGIVIGSP   74 (344)
T ss_dssp             EEEEECCSHHHHHHHHHHHHCTTE-EEEEEECSSHHHHHHHHHTTTC-EEE--SS----HHHHTT---CSCCCEEEECSC
T ss_pred             EEEEECCcHHHHHHHHHHHhCCCc-EEEEEECCCHHHHHHHHHHcCC-cee--CC----HHHHhc---CCCCCEEEEeCC
Confidence            688999999999877777665 56 555 56778877654 566774 232  11    333221   127999999999


Q ss_pred             ChHhHHHHHHHhhCCCceEEEEcCCCCCceeecc-hhhhc--cccEEEEEeccCCCCCCCHHHHHHHHHccCCC
Q 018529          249 NIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTK-PINVL--NERTLKGTFFGNYKPRTDLPSVVDMYMNKQLE  319 (354)
Q Consensus       249 ~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~-~~~~~--~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~  319 (354)
                      .....+.+..++..  |+-+++..+......... .....  +++.+.-.+  ..+....++.+.+++.+|.+.
T Consensus        75 ~~~h~~~~~~al~~--gk~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~--~~r~~p~~~~~k~~i~~g~iG  144 (344)
T 3euw_A           75 TSTHVDLITRAVER--GIPALCEKPIDLDIEMVRACKEKIGDGASKVMLGF--NRRFDPSFAAINARVANQEIG  144 (344)
T ss_dssp             GGGHHHHHHHHHHT--TCCEEECSCSCSCHHHHHHHHHHHGGGGGGEEECC--GGGGCHHHHHHHHHHHTTTTS
T ss_pred             chhhHHHHHHHHHc--CCcEEEECCCCCCHHHHHHHHHHHHhcCCeEEecc--hhhcCHHHHHHHHHHhcCCCC
Confidence            87788888888877  455667554211110100 11111  233332222  122234577888888888653

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=96.18  E-value=0.017  Score=50.94  Aligned_cols=78  Identities=18%  Similarity=0.279  Sum_probs=48.6

Q ss_pred             CCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCC-----hhhHHHH----HhcCCce-EE--cCCCCChhHHHHHHHHc
Q 018529          170 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRS-----SKRFEEA----KKFGVTD-FV--NTSEHDRPIQEVIAEMT  236 (354)
Q Consensus       170 ~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~-----~~~~~~~----~~lg~~~-v~--~~~~~~~~~~~~i~~~~  236 (354)
                      ++++||+|+ |++|...++.+...|+ +|+++.++     +++.+.+    ++.+... .+  |..+. ..+.+.+++..
T Consensus         5 ~k~vlVTGas~GIG~aia~~L~~~G~-~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~-~~v~~~~~~~~   82 (324)
T 3u9l_A            5 KKIILITGASSGFGRLTAEALAGAGH-RVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQ-VSVDRAIDQII   82 (324)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCH-HHHHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCH-HHHHHHHHHHH
Confidence            578999987 9999999999999999 88876654     3443333    2234322 22  33322 12333333222


Q ss_pred             C--CCccEEEEcccC
Q 018529          237 N--GGVDRSVECTGN  249 (354)
Q Consensus       237 ~--~~~dvv~d~~g~  249 (354)
                      .  +++|++++++|.
T Consensus        83 ~~~g~iD~lVnnAG~   97 (324)
T 3u9l_A           83 GEDGRIDVLIHNAGH   97 (324)
T ss_dssp             HHHSCCSEEEECCCC
T ss_pred             HHcCCCCEEEECCCc
Confidence            1  479999999983

>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A

Probab=96.17  E-value=0.032  Score=47.85  Aligned_cols=103  Identities=17%  Similarity=0.242  Sum_probs=65.7

Q ss_pred             hcCCCCCCeEEEEcCChhHHHHHHHHHHc-CCcEEEEEcCChhhHHHHHh----cCCceEEcCCCCChhHHHHHHHH--c
Q 018529          164 VAKPERGSSVAVFGLGAVGLAAAEGARIA-GASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEM--T  236 (354)
Q Consensus       164 ~~~~~~~~~vlI~G~g~~G~~a~~~a~~~-g~~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~~--~  236 (354)
                      ...+++|++||=+|+|+ |..+++++..+ +..+|++++.++++.+.+++    +|...+..... +  ..+....+  .
T Consensus        78 ~l~~~~g~~VLDlgaG~-G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~-D--~~~~~~~~~~~  153 (274)
T 3ajd_A           78 VLNPREDDFILDMCAAP-GGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIINA-D--MRKYKDYLLKN  153 (274)
T ss_dssp             HHCCCTTCEEEETTCTT-CHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEES-C--HHHHHHHHHHT
T ss_pred             HhCCCCcCEEEEeCCCc-cHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeC-C--hHhcchhhhhc
Confidence            34678899998888764 66667777765 43499999999998887654    46543321111 2  22222111  1


Q ss_pred             CCCccEEEE---cccC---------------------hHhHHHHHHHhhCCCceEEEEc
Q 018529          237 NGGVDRSVE---CTGN---------------------IDNMISAFECVHDGWGVAVLVG  271 (354)
Q Consensus       237 ~~~~dvv~d---~~g~---------------------~~~~~~~~~~l~~~~g~~v~~g  271 (354)
                      .+.||+|+-   |.|.                     ...++.+++.|+++ |++++..
T Consensus       154 ~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lv~st  211 (274)
T 3ajd_A          154 EIFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKD-GELVYST  211 (274)
T ss_dssp             TCCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             cccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCC-CEEEEEE
Confidence            347999974   3321                     35677888899997 9988754

>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*

Probab=96.17  E-value=0.02  Score=49.35  Aligned_cols=100  Identities=14%  Similarity=0.096  Sum_probs=65.8

Q ss_pred             CCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhc-C-------CceEEcCCCCChhHHHHHHHHcCC
Q 018529          167 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF-G-------VTDFVNTSEHDRPIQEVIAEMTNG  238 (354)
Q Consensus       167 ~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~l-g-------~~~v~~~~~~~~~~~~~i~~~~~~  238 (354)
                      ..++++||++|+|. |..+..+++..+..+|++++.+++-.+.+++. .       ..++-. ...+  ..+.+... .+
T Consensus        76 ~~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~-~~~D--~~~~l~~~-~~  150 (283)
T 2i7c_A           76 SKEPKNVLVVGGGD-GGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNV-FIED--ASKFLENV-TN  150 (283)
T ss_dssp             SSSCCEEEEEECTT-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEE-EESC--HHHHHHHC-CS
T ss_pred             CCCCCeEEEEeCCc-CHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEE-EECC--hHHHHHhC-CC
Confidence            34668999998764 66667777766545999999999998888763 2       111111 1112  44444433 34


Q ss_pred             CccEEEEccc----------ChHhHHHHHHHhhCCCceEEEEcC
Q 018529          239 GVDRSVECTG----------NIDNMISAFECVHDGWGVAVLVGV  272 (354)
Q Consensus       239 ~~dvv~d~~g----------~~~~~~~~~~~l~~~~g~~v~~g~  272 (354)
                      .+|+|+.-..          ..+.++.+.+.|+++ |.+++...
T Consensus       151 ~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pg-G~lv~~~~  193 (283)
T 2i7c_A          151 TYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPN-GYCVAQCE  193 (283)
T ss_dssp             CEEEEEEECCCTTTGGGGGSSHHHHHHHHHHEEEE-EEEEEECC
T ss_pred             CceEEEEcCCCCCCcchhhhHHHHHHHHHHhcCCC-cEEEEECC
Confidence            8999985221          136788899999997 99887743

>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}

Probab=96.17  E-value=0.051  Score=48.63  Aligned_cols=93  Identities=15%  Similarity=0.127  Sum_probs=61.8

Q ss_pred             CeEEEEcCChhHHH-HHHHHHHcCCcEEEEEcCChhhHH-HHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEccc
Q 018529          171 SSVAVFGLGAVGLA-AAEGARIAGASRIIGVDRSSKRFE-EAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  248 (354)
Q Consensus       171 ~~vlI~G~g~~G~~-a~~~a~~~g~~~vi~v~~~~~~~~-~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g  248 (354)
                      =+|.|+|+|.++.. .+..++.-+++-+.+.++++++.+ +++++|...++.  +    +.+.+.   ...+|+|+.+++
T Consensus        27 irvgiiG~G~~~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~~~~~~~~--~----~~~ll~---~~~vD~V~I~tp   97 (361)
T 3u3x_A           27 LRFAAVGLNHNHIYGQVNCLLRAGARLAGFHEKDDALAAEFSAVYADARRIA--T----AEEILE---DENIGLIVSAAV   97 (361)
T ss_dssp             CEEEEECCCSTTHHHHHHHHHHTTCEEEEEECSCHHHHHHHHHHSSSCCEES--C----HHHHHT---CTTCCEEEECCC
T ss_pred             cEEEEECcCHHHHHHHHHHhhcCCcEEEEEEcCCHHHHHHHHHHcCCCcccC--C----HHHHhc---CCCCCEEEEeCC
Confidence            47899999877743 344445678844556677777755 456677544332  1    333332   136999999998


Q ss_pred             ChHhHHHHHHHhhCCCceEEEEcCCC
Q 018529          249 NIDNMISAFECVHDGWGVAVLVGVPS  274 (354)
Q Consensus       249 ~~~~~~~~~~~l~~~~g~~v~~g~~~  274 (354)
                      .....+.+..+|..  |+-|++.-+.
T Consensus        98 ~~~H~~~~~~al~a--GkhVl~EKPl  121 (361)
T 3u3x_A           98 SSERAELAIRAMQH--GKDVLVDKPG  121 (361)
T ss_dssp             HHHHHHHHHHHHHT--TCEEEEESCS
T ss_pred             hHHHHHHHHHHHHC--CCeEEEeCCC
Confidence            87788888888887  6777786543

>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*

Probab=96.16  E-value=0.019  Score=50.03  Aligned_cols=99  Identities=14%  Similarity=0.156  Sum_probs=65.0

Q ss_pred             CCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcC--------CceEEcCCCCChhHHHHHHHHcCC
Q 018529          167 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG--------VTDFVNTSEHDRPIQEVIAEMTNG  238 (354)
Q Consensus       167 ~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg--------~~~v~~~~~~~~~~~~~i~~~~~~  238 (354)
                      ..++.+||++|+|. |..+..+++..+..+|++++.+++-.+.+++.-        ..++-.. ..+  ..+.+.. ..+
T Consensus        93 ~~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~-~~D--a~~~l~~-~~~  167 (304)
T 2o07_A           93 HPNPRKVLIIGGGD-GGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLH-VGD--GFEFMKQ-NQD  167 (304)
T ss_dssp             SSSCCEEEEEECTT-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEE-ESC--HHHHHHT-CSS
T ss_pred             CCCCCEEEEECCCc-hHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEE-ECc--HHHHHhh-CCC
Confidence            35668999999864 677778887765459999999999888887631        1111111 112  3333433 234


Q ss_pred             CccEEEE-ccc---------ChHhHHHHHHHhhCCCceEEEEc
Q 018529          239 GVDRSVE-CTG---------NIDNMISAFECVHDGWGVAVLVG  271 (354)
Q Consensus       239 ~~dvv~d-~~g---------~~~~~~~~~~~l~~~~g~~v~~g  271 (354)
                      .||+|+. ...         ..+.++.+.+.|+++ |.+++..
T Consensus       168 ~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~Lkpg-G~lv~~~  209 (304)
T 2o07_A          168 AFDVIITDSSDPMGPAESLFKESYYQLMKTALKED-GVLCCQG  209 (304)
T ss_dssp             CEEEEEEECC-----------CHHHHHHHHHEEEE-EEEEEEE
T ss_pred             CceEEEECCCCCCCcchhhhHHHHHHHHHhccCCC-eEEEEec
Confidence            7999984 322         125688899999997 9988754

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=96.15  E-value=0.0072  Score=51.76  Aligned_cols=78  Identities=19%  Similarity=0.273  Sum_probs=49.3

Q ss_pred             CCCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCce-EEcCCCCChhHHHHHHHHcC--CCcc
Q 018529          166 KPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD-FVNTSEHDRPIQEVIAEMTN--GGVD  241 (354)
Q Consensus       166 ~~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~-v~~~~~~~~~~~~~i~~~~~--~~~d  241 (354)
                      ....++++||+|+ |++|.+.++.+...|+ +|+++++++++..   . .... ..|..+.+ ++.+.+++...  +++|
T Consensus        10 ~~~~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~---~-~~~~~~~Dv~~~~-~v~~~~~~~~~~~g~iD   83 (269)
T 3vtz_A           10 EEFTDKVAIVTGGSSGIGLAVVDALVRYGA-KVVSVSLDEKSDV---N-VSDHFKIDVTNEE-EVKEAVEKTTKKYGRID   83 (269)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCC--CT---T-SSEEEECCTTCHH-HHHHHHHHHHHHHSCCC
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCchhcc---C-ceeEEEecCCCHH-HHHHHHHHHHHHcCCCC
Confidence            3467899999987 9999999988888999 8999988776541   1 1111 12333321 22222222211  4799


Q ss_pred             EEEEcccC
Q 018529          242 RSVECTGN  249 (354)
Q Consensus       242 vv~d~~g~  249 (354)
                      ++++++|.
T Consensus        84 ~lv~nAg~   91 (269)
T 3vtz_A           84 ILVNNAGI   91 (269)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCc
Confidence            99999874

>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}

Probab=96.15  E-value=0.03  Score=49.42  Aligned_cols=132  Identities=18%  Similarity=0.217  Sum_probs=80.3

Q ss_pred             eEEEEcCChhHHHHHHHHHHc-CCcEEE-EEcCChhhHHH-HHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEccc
Q 018529          172 SVAVFGLGAVGLAAAEGARIA-GASRII-GVDRSSKRFEE-AKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  248 (354)
Q Consensus       172 ~vlI~G~g~~G~~a~~~a~~~-g~~~vi-~v~~~~~~~~~-~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g  248 (354)
                      +|.|+|+|.+|...+..++.. +. .++ +.++++++.+. ++++|+.    +.+    +.+.+.+   ..+|+|+.|++
T Consensus         5 ~vgiiG~G~~g~~~~~~l~~~~~~-~l~av~d~~~~~~~~~~~~~~~~----~~~----~~~~l~~---~~~D~V~i~tp   72 (331)
T 4hkt_A            5 RFGLLGAGRIGKVHAKAVSGNADA-RLVAVADAFPAAAEAIAGAYGCE----VRT----IDAIEAA---ADIDAVVICTP   72 (331)
T ss_dssp             EEEEECCSHHHHHHHHHHHHCTTE-EEEEEECSSHHHHHHHHHHTTCE----ECC----HHHHHHC---TTCCEEEECSC
T ss_pred             EEEEECCCHHHHHHHHHHhhCCCc-EEEEEECCCHHHHHHHHHHhCCC----cCC----HHHHhcC---CCCCEEEEeCC
Confidence            688999999999877777665 66 555 56778877654 4567765    222    4443332   36899999999


Q ss_pred             ChHhHHHHHHHhhCCCceEEEEcCCCCCceeecc-hhhhc--cccEEEEEeccCCCCCCCHHHHHHHHHccCCC
Q 018529          249 NIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTK-PINVL--NERTLKGTFFGNYKPRTDLPSVVDMYMNKQLE  319 (354)
Q Consensus       249 ~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~-~~~~~--~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~  319 (354)
                      ...+.+.+..++..  |+-+++..+.....-... .....  +++.+.-.+  ..+....++.+.+++.+|.+.
T Consensus        73 ~~~h~~~~~~al~~--gk~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~--~~r~~p~~~~~~~~i~~g~iG  142 (331)
T 4hkt_A           73 TDTHADLIERFARA--GKAIFCEKPIDLDAERVRACLKVVSDTKAKLMVGF--NRRFDPHFMAVRKAIDDGRIG  142 (331)
T ss_dssp             GGGHHHHHHHHHHT--TCEEEECSCSCSSHHHHHHHHHHHHHTTCCEEECC--GGGGCHHHHHHHHHHHTTTTC
T ss_pred             chhHHHHHHHHHHc--CCcEEEecCCCCCHHHHHHHHHHHHHcCCeEEEcc--cccCCHHHHHHHHHHHcCCCC
Confidence            87788888888877  566777654311111100 11111  333332222  122234577888888888653

>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}

Probab=96.14  E-value=0.049  Score=47.49  Aligned_cols=91  Identities=15%  Similarity=0.104  Sum_probs=64.1

Q ss_pred             CCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcccC
Q 018529          170 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN  249 (354)
Q Consensus       170 ~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~  249 (354)
                      ..+|.|+|.|.+|...++.+...|. .|++.++++++.+.+.+.|...   ..+    ..+.+++     .|+||.+++.
T Consensus         9 ~~~IgiIG~G~mG~~~A~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~---~~~----~~e~~~~-----aDvVi~~vp~   75 (306)
T 3l6d_A            9 EFDVSVIGLGAMGTIMAQVLLKQGK-RVAIWNRSPGKAAALVAAGAHL---CES----VKAALSA-----SPATIFVLLD   75 (306)
T ss_dssp             SCSEEEECCSHHHHHHHHHHHHTTC-CEEEECSSHHHHHHHHHHTCEE---CSS----HHHHHHH-----SSEEEECCSS
T ss_pred             CCeEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCee---cCC----HHHHHhc-----CCEEEEEeCC
Confidence            4579999999999998888888898 8999999999999888777632   111    4343433     6999999987


Q ss_pred             hHhHHHHH-----HHhhCCCceEEEEcCCC
Q 018529          250 IDNMISAF-----ECVHDGWGVAVLVGVPS  274 (354)
Q Consensus       250 ~~~~~~~~-----~~l~~~~g~~v~~g~~~  274 (354)
                      +...+..+     ..+.++ ..++.++...
T Consensus        76 ~~~~~~v~~~~~l~~~~~g-~ivid~st~~  104 (306)
T 3l6d_A           76 NHATHEVLGMPGVARALAH-RTIVDYTTNA  104 (306)
T ss_dssp             HHHHHHHHTSTTHHHHTTT-CEEEECCCCC
T ss_pred             HHHHHHHhcccchhhccCC-CEEEECCCCC
Confidence            65444433     234554 5566555443

>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38

Probab=96.12  E-value=0.025  Score=49.56  Aligned_cols=103  Identities=22%  Similarity=0.315  Sum_probs=66.9

Q ss_pred             hhcCCCCCCeEEEEcCChhHHHHHHHHHHcC-CcEEEEEcCChhhHHHHHh----cCCceEEcCCCCChhHHHHHHHHcC
Q 018529          163 NVAKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTN  237 (354)
Q Consensus       163 ~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g-~~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~~~~  237 (354)
                      ....++++++||=+|+|+ |..+++++..++ ...|++++.++++.+.+++    +|...+.....+-.++.    . ..
T Consensus       112 ~~l~~~~g~~VLDlg~G~-G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~----~-~~  185 (315)
T 1ixk_A          112 VALDPKPGEIVADMAAAP-GGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIG----E-LN  185 (315)
T ss_dssp             HHHCCCTTCEEEECCSSC-SHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGG----G-GC
T ss_pred             HHhCCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhcc----c-cc
Confidence            345678999999888764 666777887763 2399999999998887754    46533221111111111    1 13


Q ss_pred             CCccEEEE---cccC-------------------------hHhHHHHHHHhhCCCceEEEEcC
Q 018529          238 GGVDRSVE---CTGN-------------------------IDNMISAFECVHDGWGVAVLVGV  272 (354)
Q Consensus       238 ~~~dvv~d---~~g~-------------------------~~~~~~~~~~l~~~~g~~v~~g~  272 (354)
                      +.||+|+-   |.|.                         ...+..+.+.|+++ |++++...
T Consensus       186 ~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpG-G~lv~stc  247 (315)
T 1ixk_A          186 VEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPG-GILVYSTC  247 (315)
T ss_dssp             CCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEEES
T ss_pred             ccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCC-CEEEEEeC
Confidence            47999985   3221                         25677889999997 99887543

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=96.12  E-value=0.032  Score=49.92  Aligned_cols=74  Identities=14%  Similarity=0.185  Sum_probs=48.3

Q ss_pred             CCeEEEEcC-ChhHHHHHHHHHHc-CCcEEEEEcCChhhHHHHHh-cCCceEE-cCCCCChhHHHHHHHHcCCCccEEEE
Q 018529          170 GSSVAVFGL-GAVGLAAAEGARIA-GASRIIGVDRSSKRFEEAKK-FGVTDFV-NTSEHDRPIQEVIAEMTNGGVDRSVE  245 (354)
Q Consensus       170 ~~~vlI~G~-g~~G~~a~~~a~~~-g~~~vi~v~~~~~~~~~~~~-lg~~~v~-~~~~~~~~~~~~i~~~~~~~~dvv~d  245 (354)
                      +.+|||+|+ |.+|...+..+... |. .|++++++.++.+.+.+ .++..+. |..++...+.+.++     ++|+||.
T Consensus        24 ~~~vlVtGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~~~-----~~d~Vih   97 (372)
T 3slg_A           24 AKKVLILGVNGFIGHHLSKRILETTDW-EVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEYHVK-----KCDVILP   97 (372)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHHSSC-EEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHHHH-----HCSEEEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCC-EEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHHHhc-----cCCEEEE
Confidence            468999997 99999988888877 88 89999998876554433 2333222 22211111222222     5899999


Q ss_pred             cccC
Q 018529          246 CTGN  249 (354)
Q Consensus       246 ~~g~  249 (354)
                      +++.
T Consensus        98 ~A~~  101 (372)
T 3slg_A           98 LVAI  101 (372)
T ss_dssp             CBCC
T ss_pred             cCcc
Confidence            8773

>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}

Probab=96.11  E-value=0.034  Score=48.70  Aligned_cols=88  Identities=15%  Similarity=0.205  Sum_probs=60.7

Q ss_pred             CeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcccCh
Q 018529          171 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI  250 (354)
Q Consensus       171 ~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~~  250 (354)
                      .+|.|+|+|.+|...+..+...|. .|++.++++++.+.+.+.|...   ..+    ..+.+.     .+|+||.++..+
T Consensus        31 ~~I~iIG~G~mG~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~---~~~----~~~~~~-----~~DvVi~av~~~   97 (316)
T 2uyy_A           31 KKIGFLGLGLMGSGIVSNLLKMGH-TVTVWNRTAEKCDLFIQEGARL---GRT----PAEVVS-----TCDITFACVSDP   97 (316)
T ss_dssp             SCEEEECCSHHHHHHHHHHHHTTC-CEEEECSSGGGGHHHHHTTCEE---CSC----HHHHHH-----HCSEEEECCSSH
T ss_pred             CeEEEEcccHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHcCCEE---cCC----HHHHHh-----cCCEEEEeCCCH
Confidence            579999999999998888888898 7999999999888887777531   111    333332     268999998865


Q ss_pred             HhHHHHHH-------HhhCCCceEEEEcC
Q 018529          251 DNMISAFE-------CVHDGWGVAVLVGV  272 (354)
Q Consensus       251 ~~~~~~~~-------~l~~~~g~~v~~g~  272 (354)
                      ......+.       .+.++ ..++.++.
T Consensus        98 ~~~~~v~~~~~~~~~~l~~~-~~vv~~s~  125 (316)
T 2uyy_A           98 KAAKDLVLGPSGVLQGIRPG-KCYVDMST  125 (316)
T ss_dssp             HHHHHHHHSTTCGGGGCCTT-CEEEECSC
T ss_pred             HHHHHHHcCchhHhhcCCCC-CEEEECCC
Confidence            55555543       24443 45555543

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=96.11  E-value=0.017  Score=51.00  Aligned_cols=41  Identities=22%  Similarity=0.160  Sum_probs=34.4

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEc-CChhhHHHH
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVD-RSSKRFEEA  210 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~-~~~~~~~~~  210 (354)
                      .++++||+|+ |++|.+.++.+...|+ +|++++ +++++.+.+
T Consensus        45 ~~k~~lVTGas~GIG~aia~~La~~G~-~Vv~~~~r~~~~~~~~   87 (328)
T 2qhx_A           45 TVPVALVTGAAKRLGRSIAEGLHAEGY-AVCLHYHRSAAEANAL   87 (328)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHH
Confidence            4678999987 9999999999989999 888888 888766543

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=96.11  E-value=0.018  Score=49.01  Aligned_cols=83  Identities=17%  Similarity=0.204  Sum_probs=52.2

Q ss_pred             CCCCCCeEEEEcC---ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCceEEcCCCCC-hhHHHHHHHHc-
Q 018529          166 KPERGSSVAVFGL---GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHD-RPIQEVIAEMT-  236 (354)
Q Consensus       166 ~~~~~~~vlI~G~---g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~-~~~~~~i~~~~-  236 (354)
                      ...+++++||+|+   |++|...++.+...|+ +|+.++++++..+.+++    .+....+..+-.+ .++.+.+++.. 
T Consensus        10 ~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   88 (271)
T 3ek2_A           10 GFLDGKRILLTGLLSNRSIAYGIAKACKREGA-ELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKT   88 (271)
T ss_dssp             CTTTTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCCCcHHHHHHHHHHHcCC-CEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHH
Confidence            3457889999973   6899998888888899 89989888655444433    3432233222222 12222232221 


Q ss_pred             -CCCccEEEEcccC
Q 018529          237 -NGGVDRSVECTGN  249 (354)
Q Consensus       237 -~~~~dvv~d~~g~  249 (354)
                       .+++|++++++|.
T Consensus        89 ~~g~id~lv~nAg~  102 (271)
T 3ek2_A           89 HWDSLDGLVHSIGF  102 (271)
T ss_dssp             HCSCEEEEEECCCC
T ss_pred             HcCCCCEEEECCcc
Confidence             2479999999873

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=96.11  E-value=0.022  Score=49.18  Aligned_cols=80  Identities=21%  Similarity=0.297  Sum_probs=51.3

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCc--EEEEEcCChhhHHHHHh-c-----CCce-E--EcCCCCChhHHHHHHHHc
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGAS--RIIGVDRSSKRFEEAKK-F-----GVTD-F--VNTSEHDRPIQEVIAEMT  236 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~--~vi~v~~~~~~~~~~~~-l-----g~~~-v--~~~~~~~~~~~~~i~~~~  236 (354)
                      .++++||+|+ |++|.+.+..+...|+.  +|+.++++.++.+.+.+ +     +... .  .|..+. .++.+.+++..
T Consensus        32 ~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~-~~v~~~~~~~~  110 (287)
T 3rku_A           32 AKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQA-EKIKPFIENLP  110 (287)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCG-GGHHHHHHTSC
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCH-HHHHHHHHHHH
Confidence            4689999987 99999877766655542  88888899887665432 2     3322 1  233332 23444444433


Q ss_pred             C--CCccEEEEcccC
Q 018529          237 N--GGVDRSVECTGN  249 (354)
Q Consensus       237 ~--~~~dvv~d~~g~  249 (354)
                      .  +++|++++++|.
T Consensus       111 ~~~g~iD~lVnnAG~  125 (287)
T 3rku_A          111 QEFKDIDILVNNAGK  125 (287)
T ss_dssp             GGGCSCCEEEECCCC
T ss_pred             HhcCCCCEEEECCCc
Confidence            2  379999999873

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=96.09  E-value=0.018  Score=49.80  Aligned_cols=41  Identities=22%  Similarity=0.160  Sum_probs=34.3

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEc-CChhhHHHH
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVD-RSSKRFEEA  210 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~-~~~~~~~~~  210 (354)
                      .++++||+|+ |++|.+.++.+...|+ +|+.++ +++++.+.+
T Consensus         8 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~~r~~~~~~~~   50 (291)
T 1e7w_A            8 TVPVALVTGAAKRLGRSIAEGLHAEGY-AVCLHYHRSAAEANAL   50 (291)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEcCCCHHHHHHH
Confidence            4678999987 9999999998888999 899998 888765543

>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}

Probab=96.08  E-value=0.028  Score=49.92  Aligned_cols=134  Identities=19%  Similarity=0.265  Sum_probs=80.1

Q ss_pred             eEEEEcCChhHHHHHHHHHHc-CCcEEE-EEcCChhhHHH-HHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEccc
Q 018529          172 SVAVFGLGAVGLAAAEGARIA-GASRII-GVDRSSKRFEE-AKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  248 (354)
Q Consensus       172 ~vlI~G~g~~G~~a~~~a~~~-g~~~vi-~v~~~~~~~~~-~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g  248 (354)
                      +|.|+|+|.+|...+..++.. +. .++ +.++++++.+. ++++|...++.  +    +.+.+.+   ..+|+|+.|++
T Consensus         4 rvgiIG~G~~g~~~~~~l~~~~~~-~l~av~d~~~~~~~~~~~~~~~~~~~~--~----~~~ll~~---~~~D~V~i~tp   73 (344)
T 3ezy_A            4 RIGVIGLGRIGTIHAENLKMIDDA-ILYAISDVREDRLREMKEKLGVEKAYK--D----PHELIED---PNVDAVLVCSS   73 (344)
T ss_dssp             EEEEECCSHHHHHHHHHGGGSTTE-EEEEEECSCHHHHHHHHHHHTCSEEES--S----HHHHHHC---TTCCEEEECSC
T ss_pred             EEEEEcCCHHHHHHHHHHHhCCCc-EEEEEECCCHHHHHHHHHHhCCCceeC--C----HHHHhcC---CCCCEEEEcCC
Confidence            688999999998866666554 55 555 56778777554 56678754432  1    4443332   36899999999


Q ss_pred             ChHhHHHHHHHhhCCCceEEEEcCCCCCceeecc-hhhhc--cccEEEEEeccCCCCCCCHHHHHHHHHccCCC
Q 018529          249 NIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTK-PINVL--NERTLKGTFFGNYKPRTDLPSVVDMYMNKQLE  319 (354)
Q Consensus       249 ~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~-~~~~~--~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~  319 (354)
                      .....+.+..++..  |+-+++..+......... .....  +++.+.-.+.  .+....++.+.+++.+|.+.
T Consensus        74 ~~~h~~~~~~al~~--gk~v~~EKP~~~~~~e~~~l~~~a~~~g~~~~v~~~--~R~~p~~~~~k~~i~~G~iG  143 (344)
T 3ezy_A           74 TNTHSELVIACAKA--KKHVFCEKPLSLNLADVDRMIEETKKADVILFTGFN--RRFDRNFKKLKEAVENGTIG  143 (344)
T ss_dssp             GGGHHHHHHHHHHT--TCEEEEESCSCSCHHHHHHHHHHHHHHTCCEEEECG--GGGCHHHHHHHHHHHTTTTS
T ss_pred             CcchHHHHHHHHhc--CCeEEEECCCCCCHHHHHHHHHHHHHhCCcEEEeec--ccCCHHHHHHHHHHHcCCCC
Confidence            87778888888877  555667654311111100 11111  2333322221  22334577888888888653

>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}

Probab=96.07  E-value=0.013  Score=49.89  Aligned_cols=100  Identities=15%  Similarity=0.123  Sum_probs=64.9

Q ss_pred             hhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCce--EEcCCCCChhHHHHHHHHcCCC
Q 018529          162 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD--FVNTSEHDRPIQEVIAEMTNGG  239 (354)
Q Consensus       162 ~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~--v~~~~~~~~~~~~~i~~~~~~~  239 (354)
                      .....++++.+||=+|||. |..+..+++. |. .|++++.+++..+.+++.-...  ..+..+.+..    ......+.
T Consensus        38 l~~l~l~~g~~VLDlGcGt-G~~a~~La~~-g~-~V~gvD~S~~ml~~Ar~~~~~~~v~~~~~~~~~~----~~~~~~~~  110 (261)
T 3iv6_A           38 IFLENIVPGSTVAVIGAST-RFLIEKALER-GA-SVTVFDFSQRMCDDLAEALADRCVTIDLLDITAE----IPKELAGH  110 (261)
T ss_dssp             HHTTTCCTTCEEEEECTTC-HHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHTSSSCCEEEECCTTSC----CCGGGTTC
T ss_pred             HHhcCCCCcCEEEEEeCcc-hHHHHHHHhc-CC-EEEEEECCHHHHHHHHHHHHhccceeeeeecccc----cccccCCC
Confidence            4556788999999999974 8888888875 66 9999999999999887643211  1122221100    00011247


Q ss_pred             ccEEEEcccC--------hHhHHHHHHHhhCCCceEEEE
Q 018529          240 VDRSVECTGN--------IDNMISAFECVHDGWGVAVLV  270 (354)
Q Consensus       240 ~dvv~d~~g~--------~~~~~~~~~~l~~~~g~~v~~  270 (354)
                      ||+|+....-        ...+..+.+.+ ++ |++++.
T Consensus       111 fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PG-G~l~lS  147 (261)
T 3iv6_A          111 FDFVLNDRLINRFTTEEARRACLGMLSLV-GS-GTVRAS  147 (261)
T ss_dssp             CSEEEEESCGGGSCHHHHHHHHHHHHHHH-TT-SEEEEE
T ss_pred             ccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cC-cEEEEE
Confidence            9999875321        12566677788 97 987754

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=96.06  E-value=0.086  Score=50.62  Aligned_cols=79  Identities=20%  Similarity=0.186  Sum_probs=51.2

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCCh---------hhHH----HHHhcCCceEEcCCCCC--hhHHHHH
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS---------KRFE----EAKKFGVTDFVNTSEHD--RPIQEVI  232 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~---------~~~~----~~~~lg~~~v~~~~~~~--~~~~~~i  232 (354)
                      .++++||+|+ +++|.+.+..+...|+ +|++.+++.         ++.+    .+++.|...+.+..+..  +.+.+.+
T Consensus         7 ~gkvalVTGas~GIG~a~A~~la~~Ga-~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~~~d~~d~~~~~~~v~~~   85 (604)
T 2et6_A            7 KDKVVIITGAGGGLGKYYSLEFAKLGA-KVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVAVADYNNVLDGDKIVETA   85 (604)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECC-----------CHHHHHHHHHHHTTCEEEEECCCTTCHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcCC-EEEEEeCCccccccccchHHHHHHHHHHHhcCCeEEEEcCCHHHHHHHHHHH
Confidence            4678899987 8999999998889999 888887654         3332    23334554455555543  2233333


Q ss_pred             HHHcCCCccEEEEcccC
Q 018529          233 AEMTNGGVDRSVECTGN  249 (354)
Q Consensus       233 ~~~~~~~~dvv~d~~g~  249 (354)
                      .+.. |.+|++++++|.
T Consensus        86 ~~~~-G~iDiLVnNAGi  101 (604)
T 2et6_A           86 VKNF-GTVHVIINNAGI  101 (604)
T ss_dssp             HHHH-SCCCEEEECCCC
T ss_pred             HHHc-CCCCEEEECCCC
Confidence            3322 479999999884

>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}

Probab=96.06  E-value=0.02  Score=48.87  Aligned_cols=101  Identities=17%  Similarity=0.262  Sum_probs=68.9

Q ss_pred             hhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhc----CCc---eEEcCCCCChhHHHHHH
Q 018529          161 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF----GVT---DFVNTSEHDRPIQEVIA  233 (354)
Q Consensus       161 l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~l----g~~---~v~~~~~~~~~~~~~i~  233 (354)
                      +.+...++++.+||-+|+|. |..+..+++..+. +|++++.+++..+.+++.    |..   .++..+-.+  +     
T Consensus        53 l~~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~--~-----  123 (273)
T 3bus_A           53 MIALLDVRSGDRVLDVGCGI-GKPAVRLATARDV-RVTGISISRPQVNQANARATAAGLANRVTFSYADAMD--L-----  123 (273)
T ss_dssp             HHHHSCCCTTCEEEEESCTT-SHHHHHHHHHSCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTS--C-----
T ss_pred             HHHhcCCCCCCEEEEeCCCC-CHHHHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECcccc--C-----
Confidence            45667788999999999975 8888888888887 999999999888777542    321   122111111  0     


Q ss_pred             HHcCCCccEEEEccc------ChHhHHHHHHHhhCCCceEEEEc
Q 018529          234 EMTNGGVDRSVECTG------NIDNMISAFECVHDGWGVAVLVG  271 (354)
Q Consensus       234 ~~~~~~~dvv~d~~g------~~~~~~~~~~~l~~~~g~~v~~g  271 (354)
                      .+..+.+|+|+....      ....++.+.+.|+++ |++++..
T Consensus       124 ~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pg-G~l~i~~  166 (273)
T 3bus_A          124 PFEDASFDAVWALESLHHMPDRGRALREMARVLRPG-GTVAIAD  166 (273)
T ss_dssp             CSCTTCEEEEEEESCTTTSSCHHHHHHHHHTTEEEE-EEEEEEE
T ss_pred             CCCCCCccEEEEechhhhCCCHHHHHHHHHHHcCCC-eEEEEEE
Confidence            011237999985321      134677888899997 9988765

>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}

Probab=96.05  E-value=0.026  Score=48.86  Aligned_cols=45  Identities=29%  Similarity=0.343  Sum_probs=37.4

Q ss_pred             CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhc
Q 018529          168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF  213 (354)
Q Consensus       168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~l  213 (354)
                      .++.+||=+|||. |..++.+++..+..+|+++|.+++-.+.+++.
T Consensus        45 ~~~~~VLDiGCG~-G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~   89 (292)
T 3g07_A           45 FRGRDVLDLGCNV-GHLTLSIACKWGPSRMVGLDIDSRLIHSARQN   89 (292)
T ss_dssp             TTTSEEEEESCTT-CHHHHHHHHHTCCSEEEEEESCHHHHHHHHHT
T ss_pred             cCCCcEEEeCCCC-CHHHHHHHHHcCCCEEEEECCCHHHHHHHHHH
Confidence            4678999999874 78888999988655999999999988887663

>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18

Probab=96.05  E-value=0.042  Score=47.50  Aligned_cols=97  Identities=15%  Similarity=0.085  Sum_probs=67.3

Q ss_pred             CCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCc---eEEcCCCCChhHHHHHHHHcCC
Q 018529          166 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT---DFVNTSEHDRPIQEVIAEMTNG  238 (354)
Q Consensus       166 ~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~---~v~~~~~~~~~~~~~i~~~~~~  238 (354)
                      .++++.+||-+|+| .|..+..+++..|. +|++++.+++..+.+++    .|..   .++..+-.+  +     .+..+
T Consensus        79 ~~~~~~~vLDiGcG-~G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~--~-----~~~~~  149 (297)
T 2o57_A           79 VLQRQAKGLDLGAG-YGGAARFLVRKFGV-SIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLE--I-----PCEDN  149 (297)
T ss_dssp             CCCTTCEEEEETCT-TSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTS--C-----SSCTT
T ss_pred             CCCCCCEEEEeCCC-CCHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCccc--C-----CCCCC
Confidence            78899999999997 58888888888888 99999999988777654    2331   122111111  0     01224


Q ss_pred             CccEEEEcccC------hHhHHHHHHHhhCCCceEEEEcC
Q 018529          239 GVDRSVECTGN------IDNMISAFECVHDGWGVAVLVGV  272 (354)
Q Consensus       239 ~~dvv~d~~g~------~~~~~~~~~~l~~~~g~~v~~g~  272 (354)
                      .+|+|+....-      ...+..+.+.|+++ |++++...
T Consensus       150 ~fD~v~~~~~l~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~  188 (297)
T 2o57_A          150 SYDFIWSQDAFLHSPDKLKVFQECARVLKPR-GVMAITDP  188 (297)
T ss_dssp             CEEEEEEESCGGGCSCHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             CEeEEEecchhhhcCCHHHHHHHHHHHcCCC-eEEEEEEe
Confidence            79999865321      35688899999997 99887753

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=96.05  E-value=0.019  Score=48.68  Aligned_cols=79  Identities=13%  Similarity=0.199  Sum_probs=49.9

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHH---cCCcEEEEEcCChhhHHHHH-hc-----CCce-EE--cCCCCChhHHHHHHHH
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARI---AGASRIIGVDRSSKRFEEAK-KF-----GVTD-FV--NTSEHDRPIQEVIAEM  235 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~---~g~~~vi~v~~~~~~~~~~~-~l-----g~~~-v~--~~~~~~~~~~~~i~~~  235 (354)
                      +++++||+|+ |++|...+..+..   .|+ +|+++++++++.+.+. ++     +... .+  |..+. ..+.+.+.+.
T Consensus         5 ~~k~~lVTGas~gIG~~ia~~l~~~~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~   82 (259)
T 1oaa_A            5 GCAVCVLTGASRGFGRALAPQLARLLSPGS-VMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTE-AGVQRLLSAV   82 (259)
T ss_dssp             BSEEEEESSCSSHHHHHHHHHHHTTBCTTC-EEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSH-HHHHHHHHHH
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHhhcCCC-eEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCH-HHHHHHHHHH
Confidence            3578899987 9999998777776   799 8999999987765442 22     3321 22  33221 2233333333


Q ss_pred             c----CCCcc--EEEEcccC
Q 018529          236 T----NGGVD--RSVECTGN  249 (354)
Q Consensus       236 ~----~~~~d--vv~d~~g~  249 (354)
                      .    .+++|  ++++++|.
T Consensus        83 ~~~~~~g~~d~~~lvnnAg~  102 (259)
T 1oaa_A           83 RELPRPEGLQRLLLINNAAT  102 (259)
T ss_dssp             HHSCCCTTCCEEEEEECCCC
T ss_pred             HhccccccCCccEEEECCcc
Confidence            2    23678  99998773

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=96.05  E-value=0.02  Score=49.67  Aligned_cols=92  Identities=15%  Similarity=0.261  Sum_probs=56.9

Q ss_pred             CCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCCh-------hhHHHHH---hcCCceEE-cCCCCChhHHHHHHHHcC
Q 018529          170 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS-------KRFEEAK---KFGVTDFV-NTSEHDRPIQEVIAEMTN  237 (354)
Q Consensus       170 ~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~-------~~~~~~~---~lg~~~v~-~~~~~~~~~~~~i~~~~~  237 (354)
                      +.+|||+|+ |.+|...+..+...|. .|++++++.       ++.+.++   ..++..+. |..+    . +.+.+...
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d----~-~~l~~~~~   75 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGN-PTYALVRKTITAANPETKEELIDNYQSLGVILLEGDIND----H-ETLVKAIK   75 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTC-CEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTC----H-HHHHHHHT
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCC-cEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCC----H-HHHHHHHh
Confidence            457999997 9999999988888898 788888876       5554433   34554332 2222    1 23333332


Q ss_pred             CCccEEEEcccCh--HhHHHHHHHhhCC--CceEE
Q 018529          238 GGVDRSVECTGNI--DNMISAFECVHDG--WGVAV  268 (354)
Q Consensus       238 ~~~dvv~d~~g~~--~~~~~~~~~l~~~--~g~~v  268 (354)
                       ++|+||++++..  .....+++.+...  ..+++
T Consensus        76 -~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v  109 (307)
T 2gas_A           76 -QVDIVICAAGRLLIEDQVKIIKAIKEAGNVKKFF  109 (307)
T ss_dssp             -TCSEEEECSSSSCGGGHHHHHHHHHHHCCCSEEE
T ss_pred             -CCCEEEECCcccccccHHHHHHHHHhcCCceEEe
Confidence             599999998752  2333444444432  14666

>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}

Probab=96.05  E-value=0.016  Score=47.24  Aligned_cols=97  Identities=13%  Similarity=0.086  Sum_probs=65.4

Q ss_pred             CCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCC----ceEEcCCCCChhHHHHHHHHcCCCccE
Q 018529          167 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV----TDFVNTSEHDRPIQEVIAEMTNGGVDR  242 (354)
Q Consensus       167 ~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~----~~v~~~~~~~~~~~~~i~~~~~~~~dv  242 (354)
                      ++++.+||-+|+|. |..+..+++. |..+|++++.+++..+.+++...    -.++..+-.+  +     .+..+.+|+
T Consensus        40 ~~~~~~vLdiGcG~-G~~~~~l~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~~~--~-----~~~~~~fD~  110 (215)
T 2pxx_A           40 LRPEDRILVLGCGN-SALSYELFLG-GFPNVTSVDYSSVVVAAMQACYAHVPQLRWETMDVRK--L-----DFPSASFDV  110 (215)
T ss_dssp             CCTTCCEEEETCTT-CSHHHHHHHT-TCCCEEEEESCHHHHHHHHHHTTTCTTCEEEECCTTS--C-----CSCSSCEEE
T ss_pred             cCCCCeEEEECCCC-cHHHHHHHHc-CCCcEEEEeCCHHHHHHHHHhcccCCCcEEEEcchhc--C-----CCCCCcccE
Confidence            47889999999976 7777777776 44489999999999988876422    1222111111  1     122247999


Q ss_pred             EEEccc---------------------ChHhHHHHHHHhhCCCceEEEEcCC
Q 018529          243 SVECTG---------------------NIDNMISAFECVHDGWGVAVLVGVP  273 (354)
Q Consensus       243 v~d~~g---------------------~~~~~~~~~~~l~~~~g~~v~~g~~  273 (354)
                      |+....                     ....++.+.+.|+++ |++++....
T Consensus       111 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~li~~~~~  161 (215)
T 2pxx_A          111 VLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPG-GRFISMTSA  161 (215)
T ss_dssp             EEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEE-EEEEEEESC
T ss_pred             EEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCC-CEEEEEeCC
Confidence            996321                     135677888899997 999887643

>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}

Probab=96.04  E-value=0.031  Score=50.39  Aligned_cols=136  Identities=15%  Similarity=0.140  Sum_probs=80.5

Q ss_pred             CeEEEEcCChhHHHHHHHHHHc--------CCcEEEEEcCChhhHH-HHHhcCCceEEcCCCCChhHHHHHHHHcCCCcc
Q 018529          171 SSVAVFGLGAVGLAAAEGARIA--------GASRIIGVDRSSKRFE-EAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVD  241 (354)
Q Consensus       171 ~~vlI~G~g~~G~~a~~~a~~~--------g~~~vi~v~~~~~~~~-~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~d  241 (354)
                      =+|.|+|+|.+|...+...+.+        +++-|-++++++++.+ +++++|+..++.  +    +.+.+.+   ..+|
T Consensus        26 irvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y~--d----~~ell~~---~~iD   96 (393)
T 4fb5_A           26 LGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEANAGLAEARAGEFGFEKATA--D----WRALIAD---PEVD   96 (393)
T ss_dssp             CEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--TTHHHHHHHHTCSEEES--C----HHHHHHC---TTCC
T ss_pred             ccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHHHHHHHHHHhCCCeecC--C----HHHHhcC---CCCc
Confidence            3789999999998655443322        4533444566776655 557789876542  2    4444432   3699


Q ss_pred             EEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecc-hhhhc--cccEEEEEeccCCCCCCCHHHHHHHHHccCC
Q 018529          242 RSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTK-PINVL--NERTLKGTFFGNYKPRTDLPSVVDMYMNKQL  318 (354)
Q Consensus       242 vv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~-~~~~~--~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~  318 (354)
                      +|+.|+....+.+.+..+|..  |+=|++.-+.....-... .....  +++.+.-.+  +.+....++++-+++.+|.+
T Consensus        97 aV~IatP~~~H~~~a~~al~a--GkhVl~EKPla~~~~ea~~l~~~a~~~g~~l~vg~--~~R~~p~~~~~k~~i~~G~i  172 (393)
T 4fb5_A           97 VVSVTTPNQFHAEMAIAALEA--GKHVWCEKPMAPAYADAERMLATAERSGKVAALGY--NYIQNPVMRHIRKLVGDGVI  172 (393)
T ss_dssp             EEEECSCGGGHHHHHHHHHHT--TCEEEECSCSCSSHHHHHHHHHHHHHSSSCEEECC--GGGGCHHHHHHHHHHHTTTT
T ss_pred             EEEECCChHHHHHHHHHHHhc--CCeEEEccCCcccHHHHHHhhhhHHhcCCcccccc--ccccChHHHHHHHHHHcCCC
Confidence            999999988888899999987  677888765421111100 01111  333332212  22333457888888988865


Q ss_pred             C
Q 018529          319 E  319 (354)
Q Consensus       319 ~  319 (354)
                      .
T Consensus       173 G  173 (393)
T 4fb5_A          173 G  173 (393)
T ss_dssp             C
T ss_pred             c
Confidence            3

>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*

Probab=96.02  E-value=0.069  Score=44.00  Aligned_cols=98  Identities=14%  Similarity=0.134  Sum_probs=66.0

Q ss_pred             CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCceEEcCCCCChhHHHHHHH-HcCCCccEE
Q 018529          169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAE-MTNGGVDRS  243 (354)
Q Consensus       169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~-~~~~~~dvv  243 (354)
                      +++.||=+|+|. |..++.+|+......|++++.+++..+.+++    .|...+-. ...+  ..+.+.. +..+.+|.|
T Consensus        34 ~~~~vLDiGcG~-G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~-~~~D--a~~~l~~~~~~~~~d~v  109 (218)
T 3dxy_A           34 EAPVTLEIGFGM-GASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLSNLRV-MCHD--AVEVLHKMIPDNSLRMV  109 (218)
T ss_dssp             CCCEEEEESCTT-CHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCSSEEE-ECSC--HHHHHHHHSCTTCEEEE
T ss_pred             CCCeEEEEeeeC-hHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCCcEEE-EECC--HHHHHHHHcCCCChheE
Confidence            567788789874 7788888887643489999999987776643    45543322 2222  4444443 334478988


Q ss_pred             EEcccCh--------------HhHHHHHHHhhCCCceEEEEc
Q 018529          244 VECTGNI--------------DNMISAFECVHDGWGVAVLVG  271 (354)
Q Consensus       244 ~d~~g~~--------------~~~~~~~~~l~~~~g~~v~~g  271 (354)
                      +-....+              ..+..+.+.|+++ |.+++.-
T Consensus       110 ~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpG-G~l~i~t  150 (218)
T 3dxy_A          110 QLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLG-GVFHMAT  150 (218)
T ss_dssp             EEESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             EEeCCCCccchhhhhhhhhhHHHHHHHHHHcCCC-cEEEEEe
Confidence            8653322              4788899999997 9987764

>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36

Probab=96.02  E-value=0.045  Score=44.48  Aligned_cols=96  Identities=11%  Similarity=0.028  Sum_probs=62.2

Q ss_pred             hhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhc-C------------------CceE-EcCC
Q 018529          163 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF-G------------------VTDF-VNTS  222 (354)
Q Consensus       163 ~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~l-g------------------~~~v-~~~~  222 (354)
                      ....+.++.+||.+|||. |..+..+++. |. .|+++|.+++..+.+++. +                  +..+ -+..
T Consensus        16 ~~l~~~~~~~vLD~GCG~-G~~~~~la~~-g~-~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~   92 (203)
T 1pjz_A           16 SSLNVVPGARVLVPLCGK-SQDMSWLSGQ-GY-HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFF   92 (203)
T ss_dssp             HHHCCCTTCEEEETTTCC-SHHHHHHHHH-CC-EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCS
T ss_pred             HhcccCCCCEEEEeCCCC-cHhHHHHHHC-CC-eEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccc
Confidence            344677899999999874 7777778876 88 999999999988888653 1                  1111 1111


Q ss_pred             CCChhHHHHHHHHcCCCccEEEEccc----C----hHhHHHHHHHhhCCCceEEEE
Q 018529          223 EHDRPIQEVIAEMTNGGVDRSVECTG----N----IDNMISAFECVHDGWGVAVLV  270 (354)
Q Consensus       223 ~~~~~~~~~i~~~~~~~~dvv~d~~g----~----~~~~~~~~~~l~~~~g~~v~~  270 (354)
                      +-.  +.+      .+.||+|++...    .    ...+..+.+.|+++ |+++++
T Consensus        93 ~l~--~~~------~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~Lkpg-G~~~l~  139 (203)
T 1pjz_A           93 ALT--ARD------IGHCAAFYDRAAMIALPADMRERYVQHLEALMPQA-CSGLLI  139 (203)
T ss_dssp             SST--HHH------HHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSE-EEEEEE
T ss_pred             cCC--ccc------CCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCC-cEEEEE
Confidence            111  110      026999997321    1    12467788899997 984433

>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6

Probab=96.01  E-value=0.044  Score=46.97  Aligned_cols=84  Identities=21%  Similarity=0.315  Sum_probs=57.9

Q ss_pred             eEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCc-eEEcCCCCChhHHHHHHHHcCCCccEEEEcccCh
Q 018529          172 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT-DFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI  250 (354)
Q Consensus       172 ~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~-~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~~  250 (354)
                      +|.|+|+|.+|...+..+...|. .|+++++++++.+.+.+.|.. .+..  +    .    .+.  ...|+||.++.. 
T Consensus         2 ~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~~~~~--~----~----~~~--~~~D~vi~av~~-   67 (279)
T 2f1k_A            2 KIGVVGLGLIGASLAGDLRRRGH-YLIGVSRQQSTCEKAVERQLVDEAGQ--D----L----SLL--QTAKIIFLCTPI-   67 (279)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTSCSEEES--C----G----GGG--TTCSEEEECSCH-
T ss_pred             EEEEEcCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHhCCCCccccC--C----H----HHh--CCCCEEEEECCH-
Confidence            58899999999998888888898 899999999998888887763 2211  1    1    112  258999999976 


Q ss_pred             HhHHHHHHH----hhCCCceEEEE
Q 018529          251 DNMISAFEC----VHDGWGVAVLV  270 (354)
Q Consensus       251 ~~~~~~~~~----l~~~~g~~v~~  270 (354)
                      ......++.    ++++ ..++.+
T Consensus        68 ~~~~~~~~~l~~~~~~~-~~vv~~   90 (279)
T 2f1k_A           68 QLILPTLEKLIPHLSPT-AIVTDV   90 (279)
T ss_dssp             HHHHHHHHHHGGGSCTT-CEEEEC
T ss_pred             HHHHHHHHHHHhhCCCC-CEEEEC
Confidence            334444333    3443 445544

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=96.01  E-value=0.0099  Score=50.39  Aligned_cols=74  Identities=23%  Similarity=0.261  Sum_probs=47.8

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCce-EEcCCCCChhHHHHHHHHc--CCCccEEE
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD-FVNTSEHDRPIQEVIAEMT--NGGVDRSV  244 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~-v~~~~~~~~~~~~~i~~~~--~~~~dvv~  244 (354)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.     +.. ..|..+. .++.+.+++..  .+++|+++
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~-----~~~~~~Dl~d~-~~v~~~~~~~~~~~g~iD~lv   92 (253)
T 2nm0_A           20 MSRSVLVTGGNRGIGLAIARAFADAGD-KVAITYRSGEPPEG-----FLAVKCDITDT-EQVEQAYKEIEETHGPVEVLI   92 (253)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSSCCCTT-----SEEEECCTTSH-HHHHHHHHHHHHHTCSCSEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHhhcc-----ceEEEecCCCH-HHHHHHHHHHHHHcCCCCEEE
Confidence            3678999987 9999999998888999 88888887655321     111 1233322 12222232221  24789999


Q ss_pred             EcccC
Q 018529          245 ECTGN  249 (354)
Q Consensus       245 d~~g~  249 (354)
                      +++|.
T Consensus        93 ~nAg~   97 (253)
T 2nm0_A           93 ANAGV   97 (253)
T ss_dssp             EECSC
T ss_pred             ECCCC
Confidence            98874

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=96.00  E-value=0.015  Score=50.22  Aligned_cols=80  Identities=18%  Similarity=0.148  Sum_probs=50.1

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCCh-hhHHHH-H----hcCCce-E--EcCCCC---ChhHHHHHHHH
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS-KRFEEA-K----KFGVTD-F--VNTSEH---DRPIQEVIAEM  235 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~-~~~~~~-~----~lg~~~-v--~~~~~~---~~~~~~~i~~~  235 (354)
                      .++++||+|+ |++|.+.++.+...|+ +|++++++. ++.+.+ +    +.+... .  .|..+.   ...+.+.+.+.
T Consensus        22 ~~k~~lVTGas~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~  100 (288)
T 2x9g_A           22 EAPAAVVTGAAKRIGRAIAVKLHQTGY-RVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINSC  100 (288)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHHTC-EEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-eEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHHH
Confidence            4678999987 9999999988888999 888888887 554433 2    234322 1  233331   11122222222


Q ss_pred             c--CCCccEEEEcccC
Q 018529          236 T--NGGVDRSVECTGN  249 (354)
Q Consensus       236 ~--~~~~dvv~d~~g~  249 (354)
                      .  .+++|++|+++|.
T Consensus       101 ~~~~g~iD~lvnnAG~  116 (288)
T 2x9g_A          101 FRAFGRCDVLVNNASA  116 (288)
T ss_dssp             HHHHSCCCEEEECCCC
T ss_pred             HHhcCCCCEEEECCCC
Confidence            1  1479999999873

>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}

Probab=96.00  E-value=0.061  Score=46.60  Aligned_cols=87  Identities=20%  Similarity=0.195  Sum_probs=59.6

Q ss_pred             CeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcccCh
Q 018529          171 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI  250 (354)
Q Consensus       171 ~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~~  250 (354)
                      -+|.|+|+|.+|...+..+...|. .|++.++++++.+.+.+.|.. +  ..+    ..+.+.     .+|+|+.+++.+
T Consensus         5 ~~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~-~--~~~----~~~~~~-----~~D~vi~~vp~~   71 (301)
T 3cky_A            5 IKIGFIGLGAMGKPMAINLLKEGV-TVYAFDLMEANVAAVVAQGAQ-A--CEN----NQKVAA-----ASDIIFTSLPNA   71 (301)
T ss_dssp             CEEEEECCCTTHHHHHHHHHHTTC-EEEEECSSHHHHHHHHTTTCE-E--CSS----HHHHHH-----HCSEEEECCSSH
T ss_pred             CEEEEECccHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHCCCe-e--cCC----HHHHHh-----CCCEEEEECCCH
Confidence            479999999999998888888888 899999999988887766643 1  111    333332     268999998765


Q ss_pred             HhHHHHH-------HHhhCCCceEEEEc
Q 018529          251 DNMISAF-------ECVHDGWGVAVLVG  271 (354)
Q Consensus       251 ~~~~~~~-------~~l~~~~g~~v~~g  271 (354)
                      ...+..+       ..++++ ..++.+.
T Consensus        72 ~~~~~v~~~~~~l~~~l~~~-~~vv~~~   98 (301)
T 3cky_A           72 GIVETVMNGPGGVLSACKAG-TVIVDMS   98 (301)
T ss_dssp             HHHHHHHHSTTCHHHHSCTT-CEEEECC
T ss_pred             HHHHHHHcCcchHhhcCCCC-CEEEECC
Confidence            5454444       345554 5555544

>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}

Probab=96.00  E-value=0.022  Score=52.29  Aligned_cols=104  Identities=16%  Similarity=0.214  Sum_probs=70.4

Q ss_pred             cCCCCCCeEEEEcCChhHHHHHHHHHH-cCC--cEEEEEcCChhhHHHHHhcCCceE-EcCCCCChhHHHHHHHHcCCCc
Q 018529          165 AKPERGSSVAVFGLGAVGLAAAEGARI-AGA--SRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHDRPIQEVIAEMTNGGV  240 (354)
Q Consensus       165 ~~~~~~~~vlI~G~g~~G~~a~~~a~~-~g~--~~vi~v~~~~~~~~~~~~lg~~~v-~~~~~~~~~~~~~i~~~~~~~~  240 (354)
                      ..+....+|||+|+|+||..++.++.. .+.  ..|++++.++++.+..+.+|.... ...+..+  ..+.+..+..++ 
T Consensus         8 ~~~~~~~rVlIIGaGgVG~~va~lla~~~dv~~~~I~vaD~~~~~~~~~~~~g~~~~~~~Vdadn--v~~~l~aLl~~~-   84 (480)
T 2ph5_A            8 KKILFKNRFVILGFGCVGQALMPLIFEKFDIKPSQVTIIAAEGTKVDVAQQYGVSFKLQQITPQN--YLEVIGSTLEEN-   84 (480)
T ss_dssp             TCBCCCSCEEEECCSHHHHHHHHHHHHHBCCCGGGEEEEESSCCSCCHHHHHTCEEEECCCCTTT--HHHHTGGGCCTT-
T ss_pred             ceecCCCCEEEECcCHHHHHHHHHHHhCCCCceeEEEEeccchhhhhHHhhcCCceeEEeccchh--HHHHHHHHhcCC-
Confidence            345566789999999999998877765 444  267888877776666666776432 2222332  555565555554 


Q ss_pred             cEEEEcccChHhHHHHHHHhhCCCceEEEEcC
Q 018529          241 DRSVECTGNIDNMISAFECVHDGWGVAVLVGV  272 (354)
Q Consensus       241 dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~  272 (354)
                      |+|+++.-....+..+-.|+..+ -.++....
T Consensus        85 DvVIN~s~~~~~l~Im~acleaG-v~YlDTa~  115 (480)
T 2ph5_A           85 DFLIDVSIGISSLALIILCNQKG-ALYINAAT  115 (480)
T ss_dssp             CEEEECCSSSCHHHHHHHHHHHT-CEEEESSC
T ss_pred             CEEEECCccccCHHHHHHHHHcC-CCEEECCC
Confidence            99999876556677777888886 66666654

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=96.00  E-value=0.02  Score=49.46  Aligned_cols=75  Identities=20%  Similarity=0.246  Sum_probs=51.2

Q ss_pred             CCCCeEEEEc-CChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-Hhc----CCc-eEEcCCCCChhHHHHHHHHcCCCc
Q 018529          168 ERGSSVAVFG-LGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKF----GVT-DFVNTSEHDRPIQEVIAEMTNGGV  240 (354)
Q Consensus       168 ~~~~~vlI~G-~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~~l----g~~-~v~~~~~~~~~~~~~i~~~~~~~~  240 (354)
                      -+++++||+| +|++|.+.+..+...|+ +|+.++++.++.+.+ +++    ++. ...+..+.     +.+.+... .+
T Consensus       117 l~gk~vlVtGaaGGiG~aia~~L~~~G~-~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~-----~~~~~~~~-~~  189 (287)
T 1lu9_A          117 VKGKKAVVLAGTGPVGMRSAALLAGEGA-EVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADD-----ASRAEAVK-GA  189 (287)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSH-----HHHHHHTT-TC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCH-----HHHHHHHH-hC
Confidence            3678999999 59999999999999999 699999998776544 222    322 22343321     12333322 48


Q ss_pred             cEEEEcccC
Q 018529          241 DRSVECTGN  249 (354)
Q Consensus       241 dvv~d~~g~  249 (354)
                      |++++++|.
T Consensus       190 DvlVn~ag~  198 (287)
T 1lu9_A          190 HFVFTAGAI  198 (287)
T ss_dssp             SEEEECCCT
T ss_pred             CEEEECCCc
Confidence            999999963

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=96.00  E-value=0.02  Score=50.43  Aligned_cols=81  Identities=14%  Similarity=0.126  Sum_probs=47.0

Q ss_pred             hcCCCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhh--HHHHHhc----CCceEEcCCCCC-hhHHHHHHHH
Q 018529          164 VAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR--FEEAKKF----GVTDFVNTSEHD-RPIQEVIAEM  235 (354)
Q Consensus       164 ~~~~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~--~~~~~~l----g~~~v~~~~~~~-~~~~~~i~~~  235 (354)
                      .....++.+|||+|+ |.+|...++.+...|. .|++++++.++  .+.++.+    ++. ++..+-.+ ..+.+.++..
T Consensus         8 ~~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~Dl~d~~~~~~~~~~~   85 (335)
T 1rpn_A            8 HHHGSMTRSALVTGITGQDGAYLAKLLLEKGY-RVHGLVARRSSDTRWRLRELGIEGDIQ-YEDGDMADACSVQRAVIKA   85 (335)
T ss_dssp             -------CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCCSSCCCHHHHHTTCGGGEE-EEECCTTCHHHHHHHHHHH
T ss_pred             ccccccCCeEEEECCCChHHHHHHHHHHHCCC-eEEEEeCCCccccccchhhccccCceE-EEECCCCCHHHHHHHHHHc
Confidence            344578899999987 9999999998888898 89998887653  1223333    221 22221112 1222333222


Q ss_pred             cCCCccEEEEcccC
Q 018529          236 TNGGVDRSVECTGN  249 (354)
Q Consensus       236 ~~~~~dvv~d~~g~  249 (354)
                         ++|+||.+++.
T Consensus        86 ---~~d~Vih~A~~   96 (335)
T 1rpn_A           86 ---QPQEVYNLAAQ   96 (335)
T ss_dssp             ---CCSEEEECCSC
T ss_pred             ---CCCEEEECccc
Confidence               68999999874

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=96.00  E-value=0.038  Score=46.98  Aligned_cols=79  Identities=22%  Similarity=0.296  Sum_probs=49.8

Q ss_pred             CCCeEEEEcC---ChhHHHHHHHHHHcCCcEEEEEcCCh---hhHHHHH-hcCCceEE--cCCCCChhHHHHHHHHcC--
Q 018529          169 RGSSVAVFGL---GAVGLAAAEGARIAGASRIIGVDRSS---KRFEEAK-KFGVTDFV--NTSEHDRPIQEVIAEMTN--  237 (354)
Q Consensus       169 ~~~~vlI~G~---g~~G~~a~~~a~~~g~~~vi~v~~~~---~~~~~~~-~lg~~~v~--~~~~~~~~~~~~i~~~~~--  237 (354)
                      .++++||+|+   |.+|...++.+...|+ +|+.+++++   +..+.+. +.+....+  |..+. .++.+.+++...  
T Consensus         8 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~-~~v~~~~~~~~~~~   85 (265)
T 1qsg_A            8 SGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAED-ASIDTMFAELGKVW   85 (265)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCH-HHHHHHHHHHHTTC
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCH-HHHHHHHHHHHHHc
Confidence            4678999975   6999999988888999 888888876   2333332 23432333  33322 223333443332  


Q ss_pred             CCccEEEEcccC
Q 018529          238 GGVDRSVECTGN  249 (354)
Q Consensus       238 ~~~dvv~d~~g~  249 (354)
                      +++|++++++|.
T Consensus        86 g~iD~lv~~Ag~   97 (265)
T 1qsg_A           86 PKFDGFVHSIGF   97 (265)
T ss_dssp             SSEEEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            379999999874

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=96.00  E-value=0.02  Score=48.63  Aligned_cols=92  Identities=13%  Similarity=0.092  Sum_probs=62.7

Q ss_pred             cccchhhhhhhhhhhcCCCCCCeEEEEcCC-hhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhH
Q 018529          150 LSCGVSTGLGATLNVAKPERGSSVAVFGLG-AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPI  228 (354)
Q Consensus       150 l~~~~~~a~~~l~~~~~~~~~~~vlI~G~g-~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~  228 (354)
                      +||+....+..+ +..+ -.|.+++|+|.| .+|..+++++...|+ .|+.+.+..                   .  ++
T Consensus       132 ~PcTp~gv~~lL-~~~~-l~Gk~vvVvG~s~iVG~plA~lL~~~gA-tVtv~~~~t-------------------~--~L  187 (276)
T 3ngx_A          132 VPATPRAVIDIM-DYYG-YHENTVTIVNRSPVVGRPLSMMLLNRNY-TVSVCHSKT-------------------K--DI  187 (276)
T ss_dssp             CCHHHHHHHHHH-HHHT-CCSCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECTTC-------------------S--CH
T ss_pred             CCCcHHHHHHHH-HHhC-cCCCEEEEEcCChHHHHHHHHHHHHCCC-eEEEEeCCc-------------------c--cH
Confidence            444444444443 3344 789999999985 699999999999999 788875421                   1  15


Q ss_pred             HHHHHHHcCCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCC
Q 018529          229 QEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVP  273 (354)
Q Consensus       229 ~~~i~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~  273 (354)
                      .+.+++     +|+||.++|.+..+..  ..++++ ..++.+|..
T Consensus       188 ~~~~~~-----ADIVI~Avg~p~~I~~--~~vk~G-avVIDvgi~  224 (276)
T 3ngx_A          188 GSMTRS-----SKIVVVAVGRPGFLNR--EMVTPG-SVVIDVGIN  224 (276)
T ss_dssp             HHHHHH-----SSEEEECSSCTTCBCG--GGCCTT-CEEEECCCE
T ss_pred             HHhhcc-----CCEEEECCCCCccccH--hhccCC-cEEEEeccC
Confidence            455544     6999999998655433  346775 777777654

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=95.99  E-value=0.04  Score=48.41  Aligned_cols=79  Identities=23%  Similarity=0.257  Sum_probs=51.0

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcC---------ChhhHHH----HHhcCCceEEcCCCCC--hhHHHHH
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR---------SSKRFEE----AKKFGVTDFVNTSEHD--RPIQEVI  232 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~---------~~~~~~~----~~~lg~~~v~~~~~~~--~~~~~~i  232 (354)
                      .++++||+|+ |++|...++.+...|+ +|+++++         +.++.+.    +++.+...+.+..+.+  ..+.+.+
T Consensus         8 ~gk~~lVTGas~GIG~~~a~~La~~Ga-~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~~~D~~~~~~~~~~~~~~   86 (319)
T 1gz6_A            8 DGRVVLVTGAGGGLGRAYALAFAERGA-LVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTA   86 (319)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeEEEeCCCHHHHHHHHHHH
Confidence            4678999987 9999999998888999 8888643         4444432    2334544455555533  1223333


Q ss_pred             HHHcCCCccEEEEcccC
Q 018529          233 AEMTNGGVDRSVECTGN  249 (354)
Q Consensus       233 ~~~~~~~~dvv~d~~g~  249 (354)
                      .+.. +++|++|+++|.
T Consensus        87 ~~~~-g~iD~lVnnAG~  102 (319)
T 1gz6_A           87 LDTF-GRIDVVVNNAGI  102 (319)
T ss_dssp             HHHT-SCCCEEEECCCC
T ss_pred             HHHc-CCCCEEEECCCC
Confidence            3322 479999999873

>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*

Probab=95.98  E-value=0.021  Score=50.70  Aligned_cols=91  Identities=21%  Similarity=0.268  Sum_probs=63.8

Q ss_pred             CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEccc
Q 018529          169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  248 (354)
Q Consensus       169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g  248 (354)
                      .|.+|.|+|.|.+|...++.++.+|. +|++.+++.++ +..+++|+..+   .  +  +.+.+++     .|+|+.+++
T Consensus       167 ~g~tvGIIG~G~IG~~vA~~l~~~G~-~V~~~d~~~~~-~~~~~~g~~~~---~--~--l~ell~~-----aDvV~l~~P  232 (347)
T 1mx3_A          167 RGETLGIIGLGRVGQAVALRAKAFGF-NVLFYDPYLSD-GVERALGLQRV---S--T--LQDLLFH-----SDCVTLHCG  232 (347)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECTTSCT-THHHHHTCEEC---S--S--HHHHHHH-----CSEEEECCC
T ss_pred             CCCEEEEEeECHHHHHHHHHHHHCCC-EEEEECCCcch-hhHhhcCCeec---C--C--HHHHHhc-----CCEEEEcCC
Confidence            57899999999999999999999999 89999887654 23455676321   1  1  4333332     699998876


Q ss_pred             ChH----hH-HHHHHHhhCCCceEEEEcCCC
Q 018529          249 NID----NM-ISAFECVHDGWGVAVLVGVPS  274 (354)
Q Consensus       249 ~~~----~~-~~~~~~l~~~~g~~v~~g~~~  274 (354)
                      ..+    .+ ...++.++++ ..++.++...
T Consensus       233 ~t~~t~~li~~~~l~~mk~g-ailIN~arg~  262 (347)
T 1mx3_A          233 LNEHNHHLINDFTVKQMRQG-AFLVNTARGG  262 (347)
T ss_dssp             CCTTCTTSBSHHHHTTSCTT-EEEEECSCTT
T ss_pred             CCHHHHHHhHHHHHhcCCCC-CEEEECCCCh
Confidence            421    23 4567778886 7787777543

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=95.97  E-value=0.035  Score=47.66  Aligned_cols=81  Identities=17%  Similarity=0.241  Sum_probs=50.6

Q ss_pred             CCCCeEEEEcC-Ch--hHHHHHHHHHHcCCcEEEEEcCCh--hhHHHHHh-cCCceEEcCCCCC-hhHHHHHHHHc--CC
Q 018529          168 ERGSSVAVFGL-GA--VGLAAAEGARIAGASRIIGVDRSS--KRFEEAKK-FGVTDFVNTSEHD-RPIQEVIAEMT--NG  238 (354)
Q Consensus       168 ~~~~~vlI~G~-g~--~G~~a~~~a~~~g~~~vi~v~~~~--~~~~~~~~-lg~~~v~~~~~~~-~~~~~~i~~~~--~~  238 (354)
                      -.++++||+|+ |.  +|...++.+...|+ +|+.++++.  ++.+.+.+ .+....+..+-.+ .++.+.+++..  .+
T Consensus        24 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  102 (280)
T 3nrc_A           24 LAGKKILITGLLSNKSIAYGIAKAMHREGA-ELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKVWD  102 (280)
T ss_dssp             TTTCEEEECCCCSTTCHHHHHHHHHHHTTC-EEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHHCS
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHcCC-EEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHHcC
Confidence            35789999985 44  99998888888999 899988877  55555433 3432333222222 12222232221  24


Q ss_pred             CccEEEEcccC
Q 018529          239 GVDRSVECTGN  249 (354)
Q Consensus       239 ~~dvv~d~~g~  249 (354)
                      ++|++++++|.
T Consensus       103 ~id~li~nAg~  113 (280)
T 3nrc_A          103 GLDAIVHSIAF  113 (280)
T ss_dssp             SCCEEEECCCC
T ss_pred             CCCEEEECCcc
Confidence            79999999874

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=95.97  E-value=0.029  Score=47.35  Aligned_cols=92  Identities=21%  Similarity=0.274  Sum_probs=56.5

Q ss_pred             CeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHc---CCCccEEEEc
Q 018529          171 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMT---NGGVDRSVEC  246 (354)
Q Consensus       171 ~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~---~~~~dvv~d~  246 (354)
                      +++||+|+ |.+|...++.+...|+ +|+++++++++.+.      .    . ..|-.-.+.++++.   .+++|+++++
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~------~----~-~~Dl~~~~~v~~~~~~~~~~id~lv~~   69 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGH-QIVGIDIRDAEVIA------D----L-STAEGRKQAIADVLAKCSKGMDGLVLC   69 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSSSSEEC------C----T-TSHHHHHHHHHHHHTTCTTCCSEEEEC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCchhhcc------c----c-ccCCCCHHHHHHHHHHhCCCCCEEEEC
Confidence            46899987 9999999998888999 89998887654321      0    0 11100111222222   2478999999


Q ss_pred             ccChH------------------hHHHHHHHhhC-CCceEEEEcCCC
Q 018529          247 TGNID------------------NMISAFECVHD-GWGVAVLVGVPS  274 (354)
Q Consensus       247 ~g~~~------------------~~~~~~~~l~~-~~g~~v~~g~~~  274 (354)
                      +|...                  ..+.+...+.. +.|+++.++...
T Consensus        70 Ag~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~  116 (257)
T 1fjh_A           70 AGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVA  116 (257)
T ss_dssp             CCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGG
T ss_pred             CCCCCCcccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChh
Confidence            87532                  13334444433 227899887643

>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A

Probab=95.97  E-value=0.032  Score=46.14  Aligned_cols=102  Identities=18%  Similarity=0.136  Sum_probs=65.2

Q ss_pred             hhcCCCCCCeEEEEcCChhHHHHHHHHHHcCC-cEEEEEcCChhhHHHHHh----cCCceEEcCCCCChhHHHHHHHHcC
Q 018529          163 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTN  237 (354)
Q Consensus       163 ~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~-~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~~~~  237 (354)
                      ....++++++||-+|+|. |..+..+++..|. .+|++++.+++..+.+++    ..--.++..+-.+  .. .... ..
T Consensus        67 ~~~~~~~~~~vLDlG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~--~~-~~~~-~~  141 (227)
T 1g8a_A           67 KNFPIKPGKSVLYLGIAS-GTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATK--PE-EYRA-LV  141 (227)
T ss_dssp             CCCCCCTTCEEEEETTTS-TTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTC--GG-GGTT-TC
T ss_pred             HhcCCCCCCEEEEEeccC-CHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhccCCCEEEEccCCC--cc-hhhc-cc
Confidence            344578999999999976 8888899988752 399999999976555433    2111122211111  00 0001 12


Q ss_pred             CCccEEEEcccCh----HhHHHHHHHhhCCCceEEEE
Q 018529          238 GGVDRSVECTGNI----DNMISAFECVHDGWGVAVLV  270 (354)
Q Consensus       238 ~~~dvv~d~~g~~----~~~~~~~~~l~~~~g~~v~~  270 (354)
                      +.+|+|+.....+    ..+..+.+.|+++ |++++.
T Consensus       142 ~~~D~v~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~  177 (227)
T 1g8a_A          142 PKVDVIFEDVAQPTQAKILIDNAEVYLKRG-GYGMIA  177 (227)
T ss_dssp             CCEEEEEECCCSTTHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             CCceEEEECCCCHhHHHHHHHHHHHhcCCC-CEEEEE
Confidence            3799999765543    2277888999997 998876

>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*

Probab=95.97  E-value=0.017  Score=48.92  Aligned_cols=96  Identities=16%  Similarity=0.059  Sum_probs=61.9

Q ss_pred             CCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh-cCC--------------------ceEEcCCCC
Q 018529          166 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGV--------------------TDFVNTSEH  224 (354)
Q Consensus       166 ~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~-lg~--------------------~~v~~~~~~  224 (354)
                      ..+++.+||.+|||. |..+..+|+. |. .|++++.+++..+.+++ .+.                    ..+ .+...
T Consensus        65 ~~~~~~~vLD~GCG~-G~~~~~La~~-G~-~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~  140 (252)
T 2gb4_A           65 KGQSGLRVFFPLCGK-AIEMKWFADR-GH-TVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSI-SLYCC  140 (252)
T ss_dssp             TTCCSCEEEETTCTT-CTHHHHHHHT-TC-EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSE-EEEES
T ss_pred             cCCCCCeEEEeCCCC-cHHHHHHHHC-CC-eEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCce-EEEEC
Confidence            346789999999974 7777777765 88 99999999999888854 321                    111 01011


Q ss_pred             ChhHHHHHHHHcC-CCccEEEEccc-----C---hHhHHHHHHHhhCCCceEEEE
Q 018529          225 DRPIQEVIAEMTN-GGVDRSVECTG-----N---IDNMISAFECVHDGWGVAVLV  270 (354)
Q Consensus       225 ~~~~~~~i~~~~~-~~~dvv~d~~g-----~---~~~~~~~~~~l~~~~g~~v~~  270 (354)
                      +  +.+ +. ... +.||+|++...     .   ...+..+.+.|+++ |+++++
T Consensus       141 D--~~~-l~-~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpG-G~l~l~  190 (252)
T 2gb4_A          141 S--IFD-LP-RANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKE-FQYLVA  190 (252)
T ss_dssp             C--TTT-GG-GGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEE-EEEEEE
T ss_pred             c--ccc-CC-cccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCC-eEEEEE
Confidence            1  111 11 111 47999997432     1   13577788899997 998654

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=95.97  E-value=0.023  Score=48.92  Aligned_cols=96  Identities=17%  Similarity=0.195  Sum_probs=62.2

Q ss_pred             cccchhhhhhhhhhhcCCCCCCeEEEEcCC-hhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhH
Q 018529          150 LSCGVSTGLGATLNVAKPERGSSVAVFGLG-AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPI  228 (354)
Q Consensus       150 l~~~~~~a~~~l~~~~~~~~~~~vlI~G~g-~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~  228 (354)
                      ++|+....+..+.+..---.|.+++|+|.| .+|..+++++...|+ .|+++.+.....+                   +
T Consensus       145 ~PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gA-tVtv~~~~T~~l~-------------------l  204 (300)
T 4a26_A          145 TPCTAKGVIVLLKRCGIEMAGKRAVVLGRSNIVGAPVAALLMKENA-TVTIVHSGTSTED-------------------M  204 (300)
T ss_dssp             CCHHHHHHHHHHHHHTCCCTTCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECTTSCHHH-------------------H
T ss_pred             CCCCHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCCCCch-------------------h
Confidence            444444444433332233589999999975 589999999999999 7888865332211                   0


Q ss_pred             HHHHHHHcCCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCC
Q 018529          229 QEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVP  273 (354)
Q Consensus       229 ~~~i~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~  273 (354)
                      .+.++     .+|+||.++|.+..+..  ..++++ ..++.+|..
T Consensus       205 ~~~~~-----~ADIVI~Avg~p~~I~~--~~vk~G-avVIDvgi~  241 (300)
T 4a26_A          205 IDYLR-----TADIVIAAMGQPGYVKG--EWIKEG-AAVVDVGTT  241 (300)
T ss_dssp             HHHHH-----TCSEEEECSCCTTCBCG--GGSCTT-CEEEECCCE
T ss_pred             hhhhc-----cCCEEEECCCCCCCCcH--HhcCCC-cEEEEEecc
Confidence            02222     37999999998655433  346775 777777754

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=95.96  E-value=0.023  Score=48.53  Aligned_cols=93  Identities=18%  Similarity=0.223  Sum_probs=61.4

Q ss_pred             cccchhhhhhhhhhhcC-CCCCCeEEEEcCC-hhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChh
Q 018529          150 LSCGVSTGLGATLNVAK-PERGSSVAVFGLG-AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRP  227 (354)
Q Consensus       150 l~~~~~~a~~~l~~~~~-~~~~~~vlI~G~g-~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~  227 (354)
                      ++|+....+..+ +... --.|.+++|+|.| .+|..+++++...|+ .|+.+.+...                     +
T Consensus       141 ~PcTp~gv~~lL-~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gA-tVtv~hs~t~---------------------~  197 (285)
T 3l07_A          141 ESCTPKGIMTML-REYGIKTEGAYAVVVGASNVVGKPVSQLLLNAKA-TVTTCHRFTT---------------------D  197 (285)
T ss_dssp             CCHHHHHHHHHH-HHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECTTCS---------------------S
T ss_pred             CCCCHHHHHHHH-HHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCC-eEEEEeCCch---------------------h
Confidence            444444444433 3333 3489999999985 589999999999999 7877754311                     1


Q ss_pred             HHHHHHHHcCCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCC
Q 018529          228 IQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVP  273 (354)
Q Consensus       228 ~~~~i~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~  273 (354)
                      +.+.++     .+|+|+.++|.+..+..  +.++++ ..++.+|..
T Consensus       198 L~~~~~-----~ADIVI~Avg~p~~I~~--~~vk~G-avVIDvgi~  235 (285)
T 3l07_A          198 LKSHTT-----KADILIVAVGKPNFITA--DMVKEG-AVVIDVGIN  235 (285)
T ss_dssp             HHHHHT-----TCSEEEECCCCTTCBCG--GGSCTT-CEEEECCCE
T ss_pred             HHHhcc-----cCCEEEECCCCCCCCCH--HHcCCC-cEEEEeccc
Confidence            333332     47999999998655432  446775 777777654

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=95.96  E-value=0.042  Score=47.33  Aligned_cols=41  Identities=27%  Similarity=0.412  Sum_probs=36.5

Q ss_pred             CeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh
Q 018529          171 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK  212 (354)
Q Consensus       171 ~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~  212 (354)
                      .+|.|+|+|.+|...++.+...|. .|++.++++++.+.+++
T Consensus         5 ~kV~VIGaG~mG~~iA~~la~~G~-~V~l~d~~~~~~~~~~~   45 (283)
T 4e12_A            5 TNVTVLGTGVLGSQIAFQTAFHGF-AVTAYDINTDALDAAKK   45 (283)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHH
T ss_pred             CEEEEECCCHHHHHHHHHHHhCCC-eEEEEeCCHHHHHHHHH
Confidence            589999999999999999999999 99999999998877654

>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3

Probab=95.96  E-value=0.058  Score=44.16  Aligned_cols=100  Identities=17%  Similarity=0.089  Sum_probs=62.6

Q ss_pred             cCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHH----HHHhcCCceEEcCCCCChhHHHHHHHHcCCCc
Q 018529          165 AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFE----EAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGV  240 (354)
Q Consensus       165 ~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~----~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~  240 (354)
                      ..+++|++||=+|||. |..+..+++..+..+|++++.+++..+    .+++...-..+. .+.. ... ..... .+.|
T Consensus        53 ~~~~~g~~VLDlGcGt-G~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~~~v~~~~-~d~~-~~~-~~~~~-~~~f  127 (210)
T 1nt2_A           53 LKLRGDERVLYLGAAS-GTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLL-FDAS-KPW-KYSGI-VEKV  127 (210)
T ss_dssp             CCCCSSCEEEEETCTT-SHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEEC-SCTT-CGG-GTTTT-CCCE
T ss_pred             cCCCCCCEEEEECCcC-CHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcCCCeEEEE-cCCC-Cch-hhccc-ccce
Confidence            4678999999999874 777888888775349999999987543    333332111121 1111 010 00011 2479


Q ss_pred             cEEEEcccChH----hHHHHHHHhhCCCceEEEE
Q 018529          241 DRSVECTGNID----NMISAFECVHDGWGVAVLV  270 (354)
Q Consensus       241 dvv~d~~g~~~----~~~~~~~~l~~~~g~~v~~  270 (354)
                      |+|+.....+.    .+..+.+.|+++ |++++.
T Consensus       128 D~V~~~~~~~~~~~~~l~~~~r~Lkpg-G~l~i~  160 (210)
T 1nt2_A          128 DLIYQDIAQKNQIEILKANAEFFLKEK-GEVVIM  160 (210)
T ss_dssp             EEEEECCCSTTHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             eEEEEeccChhHHHHHHHHHHHHhCCC-CEEEEE
Confidence            99997654332    257788899997 998876

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=95.95  E-value=0.11  Score=43.77  Aligned_cols=34  Identities=32%  Similarity=0.407  Sum_probs=30.2

Q ss_pred             CCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCC
Q 018529          170 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS  203 (354)
Q Consensus       170 ~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~  203 (354)
                      +.+|+|+|+|++|..++..+...|.+++..+|.+
T Consensus        28 ~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d   61 (251)
T 1zud_1           28 DSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDD   61 (251)
T ss_dssp             TCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCC
T ss_pred             cCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            4789999999999999999999999889888654

>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}

Probab=95.95  E-value=0.028  Score=50.11  Aligned_cols=134  Identities=16%  Similarity=0.210  Sum_probs=81.1

Q ss_pred             CeEEEEcCChhHHHHHHHHHHc-CCcEEEEEcCChhhHHH-HHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEccc
Q 018529          171 SSVAVFGLGAVGLAAAEGARIA-GASRIIGVDRSSKRFEE-AKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  248 (354)
Q Consensus       171 ~~vlI~G~g~~G~~a~~~a~~~-g~~~vi~v~~~~~~~~~-~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g  248 (354)
                      -+|.|+|+|.+|...+..++.. +.+.+.+.++++++.+. ++++|+..   +.+    +.+.+.   ...+|+|+.|++
T Consensus         6 ~~vgiiG~G~~g~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~g~~~---~~~----~~~~l~---~~~~D~V~i~tp   75 (354)
T 3db2_A            6 VGVAAIGLGRWAYVMADAYTKSEKLKLVTCYSRTEDKREKFGKRYNCAG---DAT----MEALLA---REDVEMVIITVP   75 (354)
T ss_dssp             EEEEEECCSHHHHHHHHHHTTCSSEEEEEEECSSHHHHHHHHHHHTCCC---CSS----HHHHHH---CSSCCEEEECSC
T ss_pred             ceEEEEccCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCCC---cCC----HHHHhc---CCCCCEEEEeCC
Confidence            3689999999998877777666 66334456788877664 45677643   222    444332   236999999999


Q ss_pred             ChHhHHHHHHHhhCCCceEEEEcCCCCCceeecc-hhhhc--cccEE-EEEeccCCCCCCCHHHHHHHHHccCCC
Q 018529          249 NIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTK-PINVL--NERTL-KGTFFGNYKPRTDLPSVVDMYMNKQLE  319 (354)
Q Consensus       249 ~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~-~~~~~--~~~~i-~g~~~~~~~~~~~~~~~~~~~~~~~~~  319 (354)
                      ...+.+.+..++..  |+-|++..+.....-... .....  +++.+ .++.   .+....++.+.+++.+|.+.
T Consensus        76 ~~~h~~~~~~al~~--gk~vl~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~---~R~~p~~~~~k~~i~~g~iG  145 (354)
T 3db2_A           76 NDKHAEVIEQCARS--GKHIYVEKPISVSLDHAQRIDQVIKETGVKFLCGHS---SRRLGALRKMKEMIDTKEIG  145 (354)
T ss_dssp             TTSHHHHHHHHHHT--TCEEEEESSSCSSHHHHHHHHHHHHHHCCCEEEECG---GGGSHHHHHHHHHHHTTTTC
T ss_pred             hHHHHHHHHHHHHc--CCEEEEccCCCCCHHHHHHHHHHHHHcCCeEEEeec---hhcCHHHHHHHHHHhcCCCC
Confidence            87788888888877  566777654311111100 11111  23333 3322   22234577888888888653

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=95.94  E-value=0.036  Score=47.01  Aligned_cols=79  Identities=20%  Similarity=0.342  Sum_probs=48.8

Q ss_pred             CCCeEEEEcC---ChhHHHHHHHHHHcCCcEEEEEcCChh---hHHHHH-hcCCceEE--cCCCCChhHHHHHHHHcC--
Q 018529          169 RGSSVAVFGL---GAVGLAAAEGARIAGASRIIGVDRSSK---RFEEAK-KFGVTDFV--NTSEHDRPIQEVIAEMTN--  237 (354)
Q Consensus       169 ~~~~vlI~G~---g~~G~~a~~~a~~~g~~~vi~v~~~~~---~~~~~~-~lg~~~v~--~~~~~~~~~~~~i~~~~~--  237 (354)
                      .++++||+|+   |.+|...++.+...|+ +|++++++++   ..+.+. +.+....+  |..+. .++.+.+++...  
T Consensus         7 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~-~~v~~~~~~~~~~~   84 (261)
T 2wyu_A            7 SGKKALVMGVTNQRSLGFAIAAKLKEAGA-EVALSYQAERLRPEAEKLAEALGGALLFRADVTQD-EELDALFAGVKEAF   84 (261)
T ss_dssp             TTCEEEEESCCSSSSHHHHHHHHHHHHTC-EEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCH-HHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCH-HHHHHHHHHHHHHc
Confidence            4678999985   6999998888888899 8998888875   223232 23432233  33221 122222222211  


Q ss_pred             CCccEEEEcccC
Q 018529          238 GGVDRSVECTGN  249 (354)
Q Consensus       238 ~~~dvv~d~~g~  249 (354)
                      +++|++++++|.
T Consensus        85 g~iD~lv~~Ag~   96 (261)
T 2wyu_A           85 GGLDYLVHAIAF   96 (261)
T ss_dssp             SSEEEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            379999999874

>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*

Probab=95.93  E-value=0.053  Score=48.25  Aligned_cols=134  Identities=15%  Similarity=0.111  Sum_probs=80.5

Q ss_pred             CeEEEEcCChhHH-HHHHHHHHc-CCcEEE-EEcCChhhHH-HHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEc
Q 018529          171 SSVAVFGLGAVGL-AAAEGARIA-GASRII-GVDRSSKRFE-EAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  246 (354)
Q Consensus       171 ~~vlI~G~g~~G~-~a~~~a~~~-g~~~vi-~v~~~~~~~~-~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~  246 (354)
                      -+|.|+|+|.+|. ..+..++.. +. .++ +.++++++.+ +++++|+...   .+    +.+.+.   ...+|+|+.|
T Consensus        28 ~rigiIG~G~~g~~~~~~~l~~~~~~-~l~av~d~~~~~~~~~a~~~g~~~~---~~----~~~ll~---~~~~D~V~i~   96 (350)
T 3rc1_A           28 IRVGVIGCADIAWRRALPALEAEPLT-EVTAIASRRWDRAKRFTERFGGEPV---EG----YPALLE---RDDVDAVYVP   96 (350)
T ss_dssp             EEEEEESCCHHHHHTHHHHHHHCTTE-EEEEEEESSHHHHHHHHHHHCSEEE---ES----HHHHHT---CTTCSEEEEC
T ss_pred             eEEEEEcCcHHHHHHHHHHHHhCCCe-EEEEEEcCCHHHHHHHHHHcCCCCc---CC----HHHHhc---CCCCCEEEEC
Confidence            3789999999998 556655555 66 554 5577777655 4566787543   11    333332   1369999999


Q ss_pred             ccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecc-hhhhc--cccEEEEEeccCCCCCCCHHHHHHHHHccCCC
Q 018529          247 TGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTK-PINVL--NERTLKGTFFGNYKPRTDLPSVVDMYMNKQLE  319 (354)
Q Consensus       247 ~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~-~~~~~--~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~  319 (354)
                      +......+.+..++..  |+-|++..+.....-... .....  +++.+.-.+.  .+....++.+-+++.+|.+.
T Consensus        97 tp~~~h~~~~~~al~a--Gk~Vl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~~--~R~~p~~~~~k~~i~~G~iG  168 (350)
T 3rc1_A           97 LPAVLHAEWIDRALRA--GKHVLAEKPLTTDRPQAERLFAVARERGLLLMENFM--FLHHPQHRQVADMLDEGVIG  168 (350)
T ss_dssp             CCGGGHHHHHHHHHHT--TCEEEEESSSCSSHHHHHHHHHHHHHTTCCEEEECG--GGGCTHHHHHHHHHHTTTTC
T ss_pred             CCcHHHHHHHHHHHHC--CCcEEEeCCCCCCHHHHHHHHHHHHHhCCEEEEEec--ccCCHHHHHHHHHHhcCCCC
Confidence            9987788888888877  566777654321111110 11111  3343322221  23334578888888888653

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=95.93  E-value=0.033  Score=49.36  Aligned_cols=95  Identities=16%  Similarity=0.125  Sum_probs=58.1

Q ss_pred             CCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCCh----hhHHHHH---hcCCceEE-cCCCCChhHHHHHHHHcCCCc
Q 018529          170 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS----KRFEEAK---KFGVTDFV-NTSEHDRPIQEVIAEMTNGGV  240 (354)
Q Consensus       170 ~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~----~~~~~~~---~lg~~~v~-~~~~~~~~~~~~i~~~~~~~~  240 (354)
                      ..+|||+|+ |.+|...+..+...|. .|+++++++    ++.+.+.   ..++..+. |..+ ...+.+.+++   .++
T Consensus        10 ~~~IlVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d-~~~l~~~~~~---~~~   84 (346)
T 3i6i_A           10 KGRVLIAGATGFIGQFVATASLDAHR-PTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINE-QEAMEKILKE---HEI   84 (346)
T ss_dssp             -CCEEEECTTSHHHHHHHHHHHHTTC-CEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTC-HHHHHHHHHH---TTC
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCCC-CEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCC-HHHHHHHHhh---CCC
Confidence            358999998 9999999999988897 888888876    4554433   34554332 2222 1223333332   279


Q ss_pred             cEEEEcccCh--HhHHHHHHHhhCC--CceEEE
Q 018529          241 DRSVECTGNI--DNMISAFECVHDG--WGVAVL  269 (354)
Q Consensus       241 dvv~d~~g~~--~~~~~~~~~l~~~--~g~~v~  269 (354)
                      |+||.+++..  .....+++.+...  -.+++.
T Consensus        85 d~Vi~~a~~~n~~~~~~l~~aa~~~g~v~~~v~  117 (346)
T 3i6i_A           85 DIVVSTVGGESILDQIALVKAMKAVGTIKRFLP  117 (346)
T ss_dssp             CEEEECCCGGGGGGHHHHHHHHHHHCCCSEEEC
T ss_pred             CEEEECCchhhHHHHHHHHHHHHHcCCceEEee
Confidence            9999998752  2234455554443  135654

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=95.93  E-value=0.061  Score=49.62  Aligned_cols=88  Identities=10%  Similarity=0.038  Sum_probs=54.2

Q ss_pred             CCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh-cCCceEEcCCCCChhHHHHHHHHcCCCccEEEEccc
Q 018529          170 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  248 (354)
Q Consensus       170 ~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~-lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g  248 (354)
                      +.+|+|+|+|.+|...+..+...|. +|++++++.++.+.+.+ ++....+..+-.+  . +.+.++.. ++|+|+++++
T Consensus         3 ~k~VlViGaG~iG~~ia~~L~~~G~-~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d--~-~~l~~~l~-~~DvVIn~a~   77 (450)
T 1ff9_A            3 TKSVLMLGSGFVTRPTLDVLTDSGI-KVTVACRTLESAKKLSAGVQHSTPISLDVND--D-AALDAEVA-KHDLVISLIP   77 (450)
T ss_dssp             CCEEEEECCSTTHHHHHHHHHTTTC-EEEEEESSHHHHHHTTTTCTTEEEEECCTTC--H-HHHHHHHT-TSSEEEECCC
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCcC-EEEEEECCHHHHHHHHHhcCCceEEEeecCC--H-HHHHHHHc-CCcEEEECCc
Confidence            5689999999999998888888898 79889999887665433 4321222122122  1 12322222 6899999998


Q ss_pred             ChHhHHHHHHHhhC
Q 018529          249 NIDNMISAFECVHD  262 (354)
Q Consensus       249 ~~~~~~~~~~~l~~  262 (354)
                      ..........++..
T Consensus        78 ~~~~~~i~~a~l~~   91 (450)
T 1ff9_A           78 YTFHATVIKSAIRQ   91 (450)
T ss_dssp             --CHHHHHHHHHHH
T ss_pred             cccchHHHHHHHhC
Confidence            63232334445555

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=95.92  E-value=0.018  Score=49.03  Aligned_cols=74  Identities=19%  Similarity=0.210  Sum_probs=48.0

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCc--eEEcCCCCC--hhHHHHHHHHcCCCccEE
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT--DFVNTSEHD--RPIQEVIAEMTNGGVDRS  243 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~--~v~~~~~~~--~~~~~~i~~~~~~~~dvv  243 (354)
                      +|+++||+|+ +++|.+.++.+...|+ +|+.+++++++     .+...  ...|..+.+  +.+.+.+.+.. |++|++
T Consensus        10 ~GK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~-----~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-G~iDil   82 (261)
T 4h15_A           10 RGKRALITAGTKGAGAATVSLFLELGA-QVLTTARARPE-----GLPEELFVEADLTTKEGCAIVAEATRQRL-GGVDVI   82 (261)
T ss_dssp             TTCEEEESCCSSHHHHHHHHHHHHTTC-EEEEEESSCCT-----TSCTTTEEECCTTSHHHHHHHHHHHHHHT-SSCSEE
T ss_pred             CCCEEEEeccCcHHHHHHHHHHHHcCC-EEEEEECCchh-----CCCcEEEEEcCCCCHHHHHHHHHHHHHHc-CCCCEE
Confidence            6889999987 9999999999999999 89989886542     11111  122333321  12223333322 479999


Q ss_pred             EEcccC
Q 018529          244 VECTGN  249 (354)
Q Consensus       244 ~d~~g~  249 (354)
                      ++++|.
T Consensus        83 VnnAG~   88 (261)
T 4h15_A           83 VHMLGG   88 (261)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            998773

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=95.92  E-value=0.021  Score=47.85  Aligned_cols=76  Identities=17%  Similarity=0.236  Sum_probs=47.7

Q ss_pred             CCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEE--cCCCCC--hhHHHHHHHHcC-CCcc
Q 018529          168 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFV--NTSEHD--RPIQEVIAEMTN-GGVD  241 (354)
Q Consensus       168 ~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~--~~~~~~--~~~~~~i~~~~~-~~~d  241 (354)
                      ..++++||+|+ |.+|...++.+...|+ +|+++++++++.+     +....+  |..+.+  ..+.+.+.+..+ +++|
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~-----~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~iD   78 (241)
T 1dhr_A            5 GEARRVLVYGGRGALGSRCVQAFRARNW-WVASIDVVENEEA-----SASVIVKMTDSFTEQADQVTAEVGKLLGDQKVD   78 (241)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESSCCTTS-----SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCC-EEEEEeCChhhcc-----CCcEEEEcCCCCHHHHHHHHHHHHHHhCCCCCC
Confidence            45788999987 9999999998888899 8999988876532     111111  111111  112222222222 4799


Q ss_pred             EEEEcccC
Q 018529          242 RSVECTGN  249 (354)
Q Consensus       242 vv~d~~g~  249 (354)
                      ++++++|.
T Consensus        79 ~lv~~Ag~   86 (241)
T 1dhr_A           79 AILCVAGG   86 (241)
T ss_dssp             EEEECCCC
T ss_pred             EEEEcccc
Confidence            99999873

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=95.92  E-value=0.035  Score=51.34  Aligned_cols=80  Identities=26%  Similarity=0.336  Sum_probs=51.7

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhH---HHHHhcCCceE-EcCCCCC--hhHHHHHHHHcCCCcc
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRF---EEAKKFGVTDF-VNTSEHD--RPIQEVIAEMTNGGVD  241 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~---~~~~~lg~~~v-~~~~~~~--~~~~~~i~~~~~~~~d  241 (354)
                      +++++||+|+ |++|...+..+...|+ +|+.+++++...   +..++++...+ .|..+.+  +.+.+.+.+..++.+|
T Consensus       212 ~gk~~LVTGgsgGIG~aiA~~La~~Ga-~Vvl~~r~~~~~~l~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g~~id  290 (454)
T 3u0b_A          212 DGKVAVVTGAARGIGATIAEVFARDGA-TVVAIDVDGAAEDLKRVADKVGGTALTLDVTADDAVDKITAHVTEHHGGKVD  290 (454)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEECGGGHHHHHHHHHHHTCEEEECCTTSTTHHHHHHHHHHHHSTTCCS
T ss_pred             CCCEEEEeCCchHHHHHHHHHHHHCCC-EEEEEeCCccHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHHcCCCce
Confidence            5788999987 9999998888888899 888888764332   23345565432 3443333  1233333333333499


Q ss_pred             EEEEcccC
Q 018529          242 RSVECTGN  249 (354)
Q Consensus       242 vv~d~~g~  249 (354)
                      ++|+++|.
T Consensus       291 ~lV~nAGv  298 (454)
T 3u0b_A          291 ILVNNAGI  298 (454)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCcc
Confidence            99999885

>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*

Probab=95.92  E-value=0.016  Score=50.43  Aligned_cols=98  Identities=13%  Similarity=0.093  Sum_probs=63.7

Q ss_pred             CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcC--------CceEEcCCCCChhHHHHHHHHcCCC
Q 018529          168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG--------VTDFVNTSEHDRPIQEVIAEMTNGG  239 (354)
Q Consensus       168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg--------~~~v~~~~~~~~~~~~~i~~~~~~~  239 (354)
                      .++.+||++|+|. |..+..+++..+..+|++++.+++..+.+++.-        ...+-.. ..+  ..+.+.. ..+.
T Consensus        89 ~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~-~~D--~~~~l~~-~~~~  163 (296)
T 1inl_A           89 PNPKKVLIIGGGD-GGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIV-IAN--GAEYVRK-FKNE  163 (296)
T ss_dssp             SSCCEEEEEECTT-CHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEE-ESC--HHHHGGG-CSSC
T ss_pred             CCCCEEEEEcCCc-CHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEE-ECc--HHHHHhh-CCCC
Confidence            3458999998864 667777787766559999999999888876631        1112111 111  3333322 2347


Q ss_pred             ccEEEEccc-----------ChHhHHHHHHHhhCCCceEEEEc
Q 018529          240 VDRSVECTG-----------NIDNMISAFECVHDGWGVAVLVG  271 (354)
Q Consensus       240 ~dvv~d~~g-----------~~~~~~~~~~~l~~~~g~~v~~g  271 (354)
                      ||+|+.-..           ..+.++.+.+.|+++ |.+++..
T Consensus       164 fD~Ii~d~~~~~~~~~~~l~~~~~l~~~~~~Lkpg-G~lv~~~  205 (296)
T 1inl_A          164 FDVIIIDSTDPTAGQGGHLFTEEFYQACYDALKED-GVFSAET  205 (296)
T ss_dssp             EEEEEEEC----------CCSHHHHHHHHHHEEEE-EEEEEEC
T ss_pred             ceEEEEcCCCcccCchhhhhHHHHHHHHHHhcCCC-cEEEEEc
Confidence            999984221           136778899999997 9988764

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=95.91  E-value=0.018  Score=50.81  Aligned_cols=76  Identities=21%  Similarity=0.308  Sum_probs=48.1

Q ss_pred             CCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhH--HHHHhcCC--c-eEEcCCCCC-hhHHHHHHHHcCCCccE
Q 018529          170 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRF--EEAKKFGV--T-DFVNTSEHD-RPIQEVIAEMTNGGVDR  242 (354)
Q Consensus       170 ~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~--~~~~~lg~--~-~v~~~~~~~-~~~~~~i~~~~~~~~dv  242 (354)
                      +.+|||+|+ |.+|...++.+...|. +|++++++.++.  +.+++++.  . ..+..+-.+ ..+.+.++..   ++|+
T Consensus         3 ~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---~~d~   78 (345)
T 2z1m_A            3 GKRALITGIRGQDGAYLAKLLLEKGY-EVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRTIEKV---QPDE   78 (345)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHHHHHHH---CCSE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEECCCcccccccHhhccccCceeEEECCCCCHHHHHHHHHhc---CCCE
Confidence            578999997 9999999988888898 899998876542  23444421  1 122111112 1222233222   5899


Q ss_pred             EEEcccC
Q 018529          243 SVECTGN  249 (354)
Q Consensus       243 v~d~~g~  249 (354)
                      ||+++|.
T Consensus        79 vih~A~~   85 (345)
T 2z1m_A           79 VYNLAAQ   85 (345)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999874

>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*

Probab=95.91  E-value=0.016  Score=48.90  Aligned_cols=98  Identities=16%  Similarity=0.141  Sum_probs=68.2

Q ss_pred             hcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCc---eEEcCCCCChhHHHHHHHHc
Q 018529          164 VAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT---DFVNTSEHDRPIQEVIAEMT  236 (354)
Q Consensus       164 ~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~---~v~~~~~~~~~~~~~i~~~~  236 (354)
                      ...++++.+||-+|+|. |..+..+++..+. +|++++.+++..+.+++    .|..   .++..+-.+  +.     +.
T Consensus        41 l~~~~~~~~vLDiG~G~-G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~--~~-----~~  111 (257)
T 3f4k_A           41 INELTDDAKIADIGCGT-GGQTLFLADYVKG-QITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDN--LP-----FQ  111 (257)
T ss_dssp             SCCCCTTCEEEEETCTT-SHHHHHHHHHCCS-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTS--CS-----SC
T ss_pred             HhcCCCCCeEEEeCCCC-CHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhh--CC-----CC
Confidence            34678899999999985 8889999999887 99999999988887654    3432   122111111  10     11


Q ss_pred             CCCccEEEEc-----ccChHhHHHHHHHhhCCCceEEEEc
Q 018529          237 NGGVDRSVEC-----TGNIDNMISAFECVHDGWGVAVLVG  271 (354)
Q Consensus       237 ~~~~dvv~d~-----~g~~~~~~~~~~~l~~~~g~~v~~g  271 (354)
                      .+.||+|+..     .+....+..+.+.|+++ |++++..
T Consensus       112 ~~~fD~v~~~~~l~~~~~~~~l~~~~~~L~pg-G~l~~~~  150 (257)
T 3f4k_A          112 NEELDLIWSEGAIYNIGFERGMNEWSKYLKKG-GFIAVSE  150 (257)
T ss_dssp             TTCEEEEEEESCSCCCCHHHHHHHHHTTEEEE-EEEEEEE
T ss_pred             CCCEEEEEecChHhhcCHHHHHHHHHHHcCCC-cEEEEEE
Confidence            2479999753     22335678888899997 9988765

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=95.90  E-value=0.0094  Score=50.75  Aligned_cols=76  Identities=18%  Similarity=0.259  Sum_probs=48.0

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceE-EcCCCCChhHHHHHHHHcC--CCccEEE
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHDRPIQEVIAEMTN--GGVDRSV  244 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v-~~~~~~~~~~~~~i~~~~~--~~~dvv~  244 (354)
                      .++++||+|+ |++|.+.+..+...|+ +|++++++.++.+.   ..+..+ .|..+. .++.+.+++...  +++|+++
T Consensus        27 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~---~~~~~~~~Dv~d~-~~v~~~~~~~~~~~g~iD~lv  101 (260)
T 3un1_A           27 QQKVVVITGASQGIGAGLVRAYRDRNY-RVVATSRSIKPSAD---PDIHTVAGDISKP-ETADRIVREGIERFGRIDSLV  101 (260)
T ss_dssp             TCCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSCCCCSS---TTEEEEESCTTSH-HHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChhhccc---CceEEEEccCCCH-HHHHHHHHHHHHHCCCCCEEE
Confidence            4678999987 9999999988888999 89999887654321   111111 222222 122222222211  3799999


Q ss_pred             EcccC
Q 018529          245 ECTGN  249 (354)
Q Consensus       245 d~~g~  249 (354)
                      +++|.
T Consensus       102 ~nAg~  106 (260)
T 3un1_A          102 NNAGV  106 (260)
T ss_dssp             ECCCC
T ss_pred             ECCCC
Confidence            99874

>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6

Probab=95.90  E-value=0.045  Score=47.00  Aligned_cols=90  Identities=19%  Similarity=0.195  Sum_probs=60.6

Q ss_pred             eEEEEcCChhHHHHHHHHHHcCCc-EEEEEcCChhhHHHHHhcCCce-EEcCCCCChhHHHHHHHHcCC-CccEEEEccc
Q 018529          172 SVAVFGLGAVGLAAAEGARIAGAS-RIIGVDRSSKRFEEAKKFGVTD-FVNTSEHDRPIQEVIAEMTNG-GVDRSVECTG  248 (354)
Q Consensus       172 ~vlI~G~g~~G~~a~~~a~~~g~~-~vi~v~~~~~~~~~~~~lg~~~-v~~~~~~~~~~~~~i~~~~~~-~~dvv~d~~g  248 (354)
                      +|.|+|+|.+|.+.++.+...|.. .|++.++++++.+.++++|... ..  .+    ..+.+     . ..|+|+.|+.
T Consensus         3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~--~~----~~~~~-----~~~aDvVilavp   71 (281)
T 2g5c_A            3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGT--TS----IAKVE-----DFSPDFVMLSSP   71 (281)
T ss_dssp             EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEE--SC----GGGGG-----GTCCSEEEECSC
T ss_pred             EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHCCCccccc--CC----HHHHh-----cCCCCEEEEcCC
Confidence            688999999999998888888752 6899999999999888888642 21  11    11111     2 4899999997


Q ss_pred             ChHhH---HHHHHHhhCCCceEEEEcCC
Q 018529          249 NIDNM---ISAFECVHDGWGVAVLVGVP  273 (354)
Q Consensus       249 ~~~~~---~~~~~~l~~~~g~~v~~g~~  273 (354)
                      .....   ......++++ ..++.++..
T Consensus        72 ~~~~~~v~~~l~~~l~~~-~iv~~~~~~   98 (281)
T 2g5c_A           72 VRTFREIAKKLSYILSED-ATVTDQGSV   98 (281)
T ss_dssp             HHHHHHHHHHHHHHSCTT-CEEEECCSC
T ss_pred             HHHHHHHHHHHHhhCCCC-cEEEECCCC
Confidence            64332   2233345564 555555543

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=95.90  E-value=0.018  Score=48.88  Aligned_cols=79  Identities=23%  Similarity=0.311  Sum_probs=49.0

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHH-HHHh----cCCce-EE--cCCCCChhHHHHHHHHc--C
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFE-EAKK----FGVTD-FV--NTSEHDRPIQEVIAEMT--N  237 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~-~~~~----lg~~~-v~--~~~~~~~~~~~~i~~~~--~  237 (354)
                      .++++||+|+ |.+|...+..+...|+ +|++++++.++.+ .+++    .+... .+  |..+. ..+.+.+++..  .
T Consensus        13 ~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~   90 (265)
T 1h5q_A           13 VNKTIIVTGGNRGIGLAFTRAVAAAGA-NVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNT-DIVTKTIQQIDADL   90 (265)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCH-HHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCH-HHHHHHHHHHHHhc
Confidence            4678999987 9999999988888998 8888888554332 2222    24322 22  32221 22333333321  2


Q ss_pred             CCccEEEEcccC
Q 018529          238 GGVDRSVECTGN  249 (354)
Q Consensus       238 ~~~dvv~d~~g~  249 (354)
                      +.+|++++++|.
T Consensus        91 ~~id~li~~Ag~  102 (265)
T 1h5q_A           91 GPISGLIANAGV  102 (265)
T ss_dssp             CSEEEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence            469999999874

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=95.89  E-value=0.019  Score=49.09  Aligned_cols=80  Identities=18%  Similarity=0.171  Sum_probs=49.8

Q ss_pred             CCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEE-cCChhhHHHH----HhcCCce-EE--cCCCCChhHHHHHHHHcC-
Q 018529          168 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGV-DRSSKRFEEA----KKFGVTD-FV--NTSEHDRPIQEVIAEMTN-  237 (354)
Q Consensus       168 ~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v-~~~~~~~~~~----~~lg~~~-v~--~~~~~~~~~~~~i~~~~~-  237 (354)
                      ..++++||+|+ |++|.+.++.+...|+ +|+.+ .++.++.+.+    ++.+... .+  |..+. .++.+.+++... 
T Consensus        24 ~~~k~vlITGas~gIG~a~a~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~  101 (272)
T 4e3z_A           24 SDTPVVLVTGGSRGIGAAVCRLAARQGW-RVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNA-ADIAAMFSAVDRQ  101 (272)
T ss_dssp             CCSCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCH-HHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCH-HHHHHHHHHHHHh
Confidence            45788999987 9999999999999999 66554 7777665543    2334332 22  22221 122222222211 


Q ss_pred             -CCccEEEEcccC
Q 018529          238 -GGVDRSVECTGN  249 (354)
Q Consensus       238 -~~~dvv~d~~g~  249 (354)
                       +++|++|+++|.
T Consensus       102 ~g~id~li~nAg~  114 (272)
T 4e3z_A          102 FGRLDGLVNNAGI  114 (272)
T ss_dssp             HSCCCEEEECCCC
T ss_pred             CCCCCEEEECCCC
Confidence             379999998873

>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*

Probab=95.89  E-value=0.024  Score=48.78  Aligned_cols=95  Identities=17%  Similarity=0.218  Sum_probs=63.1

Q ss_pred             hcccchhhhhhhhhhhcCC-CCCCeEEEEcCC-hhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCCh
Q 018529          149 ILSCGVSTGLGATLNVAKP-ERGSSVAVFGLG-AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDR  226 (354)
Q Consensus       149 ~l~~~~~~a~~~l~~~~~~-~~~~~vlI~G~g-~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~  226 (354)
                      .+||+....+.. .+..++ -.|.+++|+|.| .+|.-+++++...|+ .|+++.+..                   .  
T Consensus       144 ~~PcTp~gi~~l-l~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gA-tVtv~hs~t-------------------~--  200 (301)
T 1a4i_A          144 FIPCTPKGCLEL-IKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNA-TVTTCHSKT-------------------A--  200 (301)
T ss_dssp             CCCHHHHHHHHH-HHTTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECTTC-------------------S--
T ss_pred             ccCchHHHHHHH-HHHcCCCCCCCEEEEECCCchHHHHHHHHHHhCCC-eEEEEECCc-------------------c--
Confidence            345443333333 233333 478999999997 589999999999999 788775331                   1  


Q ss_pred             hHHHHHHHHcCCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCC
Q 018529          227 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS  274 (354)
Q Consensus       227 ~~~~~i~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~  274 (354)
                      ++.+.++     .+|+||.++|.+.++..  +.++++ ..++.+|...
T Consensus       201 ~L~~~~~-----~ADIVI~Avg~p~~I~~--~~vk~G-avVIDVgi~~  240 (301)
T 1a4i_A          201 HLDEEVN-----KGDILVVATGQPEMVKG--EWIKPG-AIVIDCGINY  240 (301)
T ss_dssp             SHHHHHT-----TCSEEEECCCCTTCBCG--GGSCTT-CEEEECCCBC
T ss_pred             cHHHHhc-----cCCEEEECCCCcccCCH--HHcCCC-cEEEEccCCC
Confidence            1444332     47999999999755332  336776 8888887653

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=95.89  E-value=0.026  Score=47.44  Aligned_cols=70  Identities=27%  Similarity=0.386  Sum_probs=43.9

Q ss_pred             CeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcccC
Q 018529          171 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN  249 (354)
Q Consensus       171 ~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~  249 (354)
                      +++||+|+ |.+|...+..+...|+ +|+++++++++.+.      ....|..+. ..+.+.++++ .+++|+||+++|.
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~------~~~~D~~~~-~~~~~~~~~~-~~~~d~vi~~Ag~   72 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGH-TVIGIDRGQADIEA------DLSTPGGRE-TAVAAVLDRC-GGVLDGLVCCAGV   72 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSSSSEEC------CTTSHHHHH-HHHHHHHHHH-TTCCSEEEECCCC
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEeCChhHccc------cccCCcccH-HHHHHHHHHc-CCCccEEEECCCC
Confidence            36899987 9999999888888898 89999887654211      000000000 1122223322 2479999998874

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=95.89  E-value=0.021  Score=48.72  Aligned_cols=79  Identities=24%  Similarity=0.303  Sum_probs=50.1

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcC-ChhhHHHH----HhcCCce-EE--cCCCCChhHHHHHHHHcC--
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR-SSKRFEEA----KKFGVTD-FV--NTSEHDRPIQEVIAEMTN--  237 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~-~~~~~~~~----~~lg~~~-v~--~~~~~~~~~~~~i~~~~~--  237 (354)
                      ++.++||+|+ |.+|...+..+...|+ +|+++++ ++++.+.+    ++.+... .+  |..+. ..+.+.+++...  
T Consensus        20 ~~k~vlItGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~   97 (274)
T 1ja9_A           20 AGKVALTTGAGRGIGRGIAIELGRRGA-SVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKP-SEVVALFDKAVSHF   97 (274)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSH-HHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCH-HHHHHHHHHHHHHc
Confidence            4678999987 9999999988888999 8888877 66654432    3345432 22  22221 123333332211  


Q ss_pred             CCccEEEEcccC
Q 018529          238 GGVDRSVECTGN  249 (354)
Q Consensus       238 ~~~dvv~d~~g~  249 (354)
                      +++|++++++|.
T Consensus        98 ~~~d~vi~~Ag~  109 (274)
T 1ja9_A           98 GGLDFVMSNSGM  109 (274)
T ss_dssp             SCEEEEECCCCC
T ss_pred             CCCCEEEECCCC
Confidence            379999998873

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=95.88  E-value=0.017  Score=48.21  Aligned_cols=73  Identities=25%  Similarity=0.269  Sum_probs=46.5

Q ss_pred             CCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCC-hh---HHHHHHHHcC-CCccEE
Q 018529          170 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHD-RP---IQEVIAEMTN-GGVDRS  243 (354)
Q Consensus       170 ~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~-~~---~~~~i~~~~~-~~~dvv  243 (354)
                      ++++||+|+ |.+|...++.+...|+ +|+++++++++.+     +....+..+-.+ .+   +.+.+.+..+ +++|++
T Consensus         3 ~k~vlITGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~l   76 (236)
T 1ooe_A            3 SGKVIVYGGKGALGSAILEFFKKNGY-TVLNIDLSANDQA-----DSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGV   76 (236)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCCTTS-----SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEecCccccc-----cccEEEeCCCCCHHHHHHHHHHHHHHhCCCCCCEE
Confidence            568999987 9999999999888998 8999988876532     111111111111 11   2222222222 479999


Q ss_pred             EEccc
Q 018529          244 VECTG  248 (354)
Q Consensus       244 ~d~~g  248 (354)
                      ++++|
T Consensus        77 v~~Ag   81 (236)
T 1ooe_A           77 FCVAG   81 (236)
T ss_dssp             EECCC
T ss_pred             EECCc
Confidence            99988

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=95.88  E-value=0.013  Score=49.67  Aligned_cols=68  Identities=19%  Similarity=0.217  Sum_probs=48.8

Q ss_pred             CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh-cCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcc
Q 018529          169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  247 (354)
Q Consensus       169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~-lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~  247 (354)
                      .+ +++|+|+|++|.+++..+...|+++|++++|+.++.+.+.+ ++.   ....    ++.+.+.     .+|+|++++
T Consensus       108 ~~-~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~~~~~---~~~~----~~~~~~~-----~aDiVInat  174 (253)
T 3u62_A          108 KE-PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTIERAKALDFPVKI---FSLD----QLDEVVK-----KAKSLFNTT  174 (253)
T ss_dssp             CS-SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCSSCEE---EEGG----GHHHHHH-----TCSEEEECS
T ss_pred             CC-eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHccc---CCHH----HHHhhhc-----CCCEEEECC
Confidence            46 99999999999999999999998789999999887665432 331   1111    1322222     489999988


Q ss_pred             cC
Q 018529          248 GN  249 (354)
Q Consensus       248 g~  249 (354)
                      +.
T Consensus       175 p~  176 (253)
T 3u62_A          175 SV  176 (253)
T ss_dssp             ST
T ss_pred             CC
Confidence            53

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=95.87  E-value=0.027  Score=48.10  Aligned_cols=93  Identities=20%  Similarity=0.240  Sum_probs=61.5

Q ss_pred             cccchhhhhhhhhhhcC-CCCCCeEEEEcCC-hhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChh
Q 018529          150 LSCGVSTGLGATLNVAK-PERGSSVAVFGLG-AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRP  227 (354)
Q Consensus       150 l~~~~~~a~~~l~~~~~-~~~~~~vlI~G~g-~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~  227 (354)
                      ++|+....+..+ +... --.|.+++|+|.| .+|..+++++...|+ .|+.+.+..+                     +
T Consensus       140 ~PcTp~gv~~lL-~~~~i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gA-tVtv~h~~t~---------------------~  196 (285)
T 3p2o_A          140 LPCTPLGVMKLL-KAYEIDLEGKDAVIIGASNIVGRPMATMLLNAGA-TVSVCHIKTK---------------------D  196 (285)
T ss_dssp             CCHHHHHHHHHH-HHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECTTCS---------------------C
T ss_pred             CCCCHHHHHHHH-HHhCCCCCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCch---------------------h
Confidence            444433333333 3333 3589999999985 589999999999999 7887754321                     1


Q ss_pred             HHHHHHHHcCCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCC
Q 018529          228 IQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVP  273 (354)
Q Consensus       228 ~~~~i~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~  273 (354)
                      +.+.++     .+|+|+.++|.+..+..  +.++++ ..++.+|..
T Consensus       197 L~~~~~-----~ADIVI~Avg~p~~I~~--~~vk~G-avVIDVgi~  234 (285)
T 3p2o_A          197 LSLYTR-----QADLIIVAAGCVNLLRS--DMVKEG-VIVVDVGIN  234 (285)
T ss_dssp             HHHHHT-----TCSEEEECSSCTTCBCG--GGSCTT-EEEEECCCE
T ss_pred             HHHHhh-----cCCEEEECCCCCCcCCH--HHcCCC-eEEEEeccC
Confidence            333332     47999999998655432  446775 777777754

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=95.87  E-value=0.019  Score=48.62  Aligned_cols=78  Identities=22%  Similarity=0.382  Sum_probs=49.0

Q ss_pred             CCeEEEEcC-ChhHHHHHHHHHHcC--CcEEEEEcCChhhHHHHHh-cCCceE-E--cCCCCChhHHHHHHHHc--CCCc
Q 018529          170 GSSVAVFGL-GAVGLAAAEGARIAG--ASRIIGVDRSSKRFEEAKK-FGVTDF-V--NTSEHDRPIQEVIAEMT--NGGV  240 (354)
Q Consensus       170 ~~~vlI~G~-g~~G~~a~~~a~~~g--~~~vi~v~~~~~~~~~~~~-lg~~~v-~--~~~~~~~~~~~~i~~~~--~~~~  240 (354)
                      ++++||+|+ |++|.+.++.+...|  + +|+.+++++++.+.+.+ ++.... +  |..+. ..+.+.+++..  .+++
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~~~g~i   79 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDT-VVYGVARSEAPLKKLKEKYGDRFFYVVGDITED-SVLKQLVNAAVKGHGKI   79 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSC-EEEEEESCHHHHHHHHHHHGGGEEEEESCTTSH-HHHHHHHHHHHHHHSCC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCe-EEEEecCCHHHHHHHHHHhCCceEEEECCCCCH-HHHHHHHHHHHHhcCCc
Confidence            578999987 999998777666654  5 88889899887766543 443222 2  33222 12222222221  1479


Q ss_pred             cEEEEcccC
Q 018529          241 DRSVECTGN  249 (354)
Q Consensus       241 dvv~d~~g~  249 (354)
                      |++++++|.
T Consensus        80 d~lvnnAg~   88 (254)
T 3kzv_A           80 DSLVANAGV   88 (254)
T ss_dssp             CEEEEECCC
T ss_pred             cEEEECCcc
Confidence            999999874

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=95.86  E-value=0.019  Score=48.03  Aligned_cols=99  Identities=19%  Similarity=0.225  Sum_probs=58.1

Q ss_pred             CCeEEEEcC-ChhHHHHHHHHHHcCCc-EEEEEcCChhhHHHHHhcCCceE-EcCCCCChhHHHHHHHHcCCCccEEEEc
Q 018529          170 GSSVAVFGL-GAVGLAAAEGARIAGAS-RIIGVDRSSKRFEEAKKFGVTDF-VNTSEHDRPIQEVIAEMTNGGVDRSVEC  246 (354)
Q Consensus       170 ~~~vlI~G~-g~~G~~a~~~a~~~g~~-~vi~v~~~~~~~~~~~~lg~~~v-~~~~~~~~~~~~~i~~~~~~~~dvv~d~  246 (354)
                      +.++||+|+ |.+|...++.+...|.. +|+++++++++.+....-++..+ .|..+.     +.+.+... ++|+||++
T Consensus        18 ~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~-----~~~~~~~~-~~d~vi~~   91 (242)
T 2bka_A           18 NKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKL-----DDYASAFQ-GHDVGFCC   91 (242)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGG-----GGGGGGGS-SCSEEEEC
T ss_pred             CCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccccCCceEEecCcCCH-----HHHHHHhc-CCCEEEEC
Confidence            578999987 99999999888888863 67788787654432211122211 122211     12333322 68999999


Q ss_pred             ccChH--------------hHHHHHHHhhC-CCceEEEEcCCC
Q 018529          247 TGNID--------------NMISAFECVHD-GWGVAVLVGVPS  274 (354)
Q Consensus       247 ~g~~~--------------~~~~~~~~l~~-~~g~~v~~g~~~  274 (354)
                      +|...              ....+.+.+.. +.+++++++...
T Consensus        92 ag~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~  134 (242)
T 2bka_A           92 LGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKG  134 (242)
T ss_dssp             CCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred             CCcccccCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccCc
Confidence            98531              11223333333 226899888654

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=95.86  E-value=0.022  Score=47.71  Aligned_cols=79  Identities=16%  Similarity=0.206  Sum_probs=49.7

Q ss_pred             CCeEEEEcC-ChhHHHHHHHHHHcCCc------EEEEEcCChhhHHHHHh----cCCce-EE--cCCCCChhHHHHHHHH
Q 018529          170 GSSVAVFGL-GAVGLAAAEGARIAGAS------RIIGVDRSSKRFEEAKK----FGVTD-FV--NTSEHDRPIQEVIAEM  235 (354)
Q Consensus       170 ~~~vlI~G~-g~~G~~a~~~a~~~g~~------~vi~v~~~~~~~~~~~~----lg~~~-v~--~~~~~~~~~~~~i~~~  235 (354)
                      ++++||+|+ |.+|...+..+...|+.      +|+++++++++.+.+.+    .+... .+  |..+. ..+.+.+++.
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~v~~~~~~~   80 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDM-ADVRRLTTHI   80 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSH-HHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCH-HHHHHHHHHH
Confidence            567999987 99999988888888874      78888888877654432    24321 22  22221 1222222222


Q ss_pred             c--CCCccEEEEcccC
Q 018529          236 T--NGGVDRSVECTGN  249 (354)
Q Consensus       236 ~--~~~~dvv~d~~g~  249 (354)
                      .  .+++|++++++|.
T Consensus        81 ~~~~g~id~li~~Ag~   96 (244)
T 2bd0_A           81 VERYGHIDCLVNNAGV   96 (244)
T ss_dssp             HHHTSCCSEEEECCCC
T ss_pred             HHhCCCCCEEEEcCCc
Confidence            1  2479999999873

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=95.86  E-value=0.052  Score=50.71  Aligned_cols=83  Identities=20%  Similarity=0.270  Sum_probs=53.4

Q ss_pred             CCCC--CeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChh-------hHHHHHhcCCceEE-cCCCCC-hhHHHHHHH
Q 018529          167 PERG--SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSK-------RFEEAKKFGVTDFV-NTSEHD-RPIQEVIAE  234 (354)
Q Consensus       167 ~~~~--~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~-------~~~~~~~lg~~~v~-~~~~~~-~~~~~~i~~  234 (354)
                      ++++  .++||+|+ |++|...++.+...|+.+|+.+.++..       ..+.+++.|....+ ..+-.+ ..+.+.+.+
T Consensus       234 ~~~~~~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~  313 (496)
T 3mje_A          234 KRPPVHGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAE  313 (496)
T ss_dssp             CCCCCCSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHT
T ss_pred             CCCCCCCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHH
Confidence            3455  89999987 999999888888889878888877532       12334556764322 222222 234444444


Q ss_pred             HcCC-CccEEEEcccC
Q 018529          235 MTNG-GVDRSVECTGN  249 (354)
Q Consensus       235 ~~~~-~~dvv~d~~g~  249 (354)
                      .... ++|+||+++|.
T Consensus       314 i~~~g~ld~vVh~AGv  329 (496)
T 3mje_A          314 LPEDAPLTAVFHSAGV  329 (496)
T ss_dssp             CCTTSCEEEEEECCCC
T ss_pred             HHHhCCCeEEEECCcc
Confidence            4333 79999999885

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=95.86  E-value=0.033  Score=53.62  Aligned_cols=79  Identities=23%  Similarity=0.184  Sum_probs=46.0

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcC---------ChhhHHH----HHhcCCceEEcCCCCChhHHHHHHH
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR---------SSKRFEE----AKKFGVTDFVNTSEHDRPIQEVIAE  234 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~---------~~~~~~~----~~~lg~~~v~~~~~~~~~~~~~i~~  234 (354)
                      .|+++||+|+ +++|.+.+..+...|+ +|+++++         +.++.+.    +++.+...+.+..+.. +..+.+++
T Consensus        18 ~gk~~lVTGas~GIG~aiA~~La~~Ga-~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~D~~d~~-~~~~~~~~   95 (613)
T 3oml_A           18 DGRVAVVTGAGAGLGREYALLFAERGA-KVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAVADYNSVI-DGAKVIET   95 (613)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEC--------------CHHHHHHHHHHTTCCEEECCCCGG-GHHHHHC-
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeEEEEeCCHH-HHHHHHHH
Confidence            4788999987 9999998888888899 8888876         4443332    3445655555555432 23333333


Q ss_pred             HcC--CCccEEEEcccC
Q 018529          235 MTN--GGVDRSVECTGN  249 (354)
Q Consensus       235 ~~~--~~~dvv~d~~g~  249 (354)
                      ...  +++|++++++|.
T Consensus        96 ~~~~~g~iDiLVnnAGi  112 (613)
T 3oml_A           96 AIKAFGRVDILVNNAGI  112 (613)
T ss_dssp             ---------CEECCCCC
T ss_pred             HHHHCCCCcEEEECCCC
Confidence            222  378999999884

>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*

Probab=95.85  E-value=0.015  Score=48.65  Aligned_cols=99  Identities=15%  Similarity=0.193  Sum_probs=63.8

Q ss_pred             CCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCC---ceEEcCCCCChhHHHHHHHHcCCCccEE
Q 018529          167 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV---TDFVNTSEHDRPIQEVIAEMTNGGVDRS  243 (354)
Q Consensus       167 ~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~---~~v~~~~~~~~~~~~~i~~~~~~~~dvv  243 (354)
                      .+++.+||=+|+|. |..+..+++... .+|++++.+++..+.+++...   ..+.. ...+  +.+.+..+..+.||+|
T Consensus        58 ~~~~~~vLDiGcGt-G~~~~~l~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~v~~-~~~d--~~~~~~~~~~~~fD~V  132 (236)
T 1zx0_A           58 SSKGGRVLEVGFGM-AIAASKVQEAPI-DEHWIIECNDGVFQRLRDWAPRQTHKVIP-LKGL--WEDVAPTLPDGHFDGI  132 (236)
T ss_dssp             TTTCEEEEEECCTT-SHHHHHHHTSCE-EEEEEEECCHHHHHHHHHHGGGCSSEEEE-EESC--HHHHGGGSCTTCEEEE
T ss_pred             CCCCCeEEEEeccC-CHHHHHHHhcCC-CeEEEEcCCHHHHHHHHHHHHhcCCCeEE-EecC--HHHhhcccCCCceEEE
Confidence            56788999999874 677777755433 489999999998888866321   22211 1122  3332223334579999


Q ss_pred             EE-ccc----Ch------HhHHHHHHHhhCCCceEEEEc
Q 018529          244 VE-CTG----NI------DNMISAFECVHDGWGVAVLVG  271 (354)
Q Consensus       244 ~d-~~g----~~------~~~~~~~~~l~~~~g~~v~~g  271 (354)
                      +. +.+    ..      ..+..+.+.|+++ |+++++.
T Consensus       133 ~~d~~~~~~~~~~~~~~~~~l~~~~r~Lkpg-G~l~~~~  170 (236)
T 1zx0_A          133 LYDTYPLSEETWHTHQFNFIKNHAFRLLKPG-GVLTYCN  170 (236)
T ss_dssp             EECCCCCBGGGTTTHHHHHHHHTHHHHEEEE-EEEEECC
T ss_pred             EECCcccchhhhhhhhHHHHHHHHHHhcCCC-eEEEEEe
Confidence            87 222    11      2367889999997 9988764

>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A

Probab=95.85  E-value=0.022  Score=52.28  Aligned_cols=102  Identities=14%  Similarity=0.232  Sum_probs=67.7

Q ss_pred             hhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCc-eEEcCCCCChhHHHHHHHHcC
Q 018529          163 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT-DFVNTSEHDRPIQEVIAEMTN  237 (354)
Q Consensus       163 ~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~-~v~~~~~~~~~~~~~i~~~~~  237 (354)
                      ....++++++||-+|+|+ |..+.+++...+...|++++.++++.+.+++    +|.. .++..+..+  +.+   .+..
T Consensus       240 ~~l~~~~g~~VLDlgaG~-G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~~~--~~~---~~~~  313 (429)
T 1sqg_A          240 TWLAPQNGEHILDLCAAP-GGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRY--PSQ---WCGE  313 (429)
T ss_dssp             HHHCCCTTCEEEEESCTT-CHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTC--THH---HHTT
T ss_pred             HHcCCCCcCeEEEECCCc-hHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCCCeEEEeCchhh--chh---hccc
Confidence            345678999999999876 7777788887753499999999998887754    4543 222222211  211   1223


Q ss_pred             CCccEEEE---cccC-------------------------hHhHHHHHHHhhCCCceEEEEc
Q 018529          238 GGVDRSVE---CTGN-------------------------IDNMISAFECVHDGWGVAVLVG  271 (354)
Q Consensus       238 ~~~dvv~d---~~g~-------------------------~~~~~~~~~~l~~~~g~~v~~g  271 (354)
                      +.||.|+-   |.|.                         ...+..+++.|+++ |++++..
T Consensus       314 ~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpG-G~lvyst  374 (429)
T 1sqg_A          314 QQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTG-GTLVYAT  374 (429)
T ss_dssp             CCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEE-EEEEEEE
T ss_pred             CCCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEEE
Confidence            47999985   4432                         14567788889997 9988764

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=95.84  E-value=0.061  Score=47.99  Aligned_cols=91  Identities=14%  Similarity=0.175  Sum_probs=61.1

Q ss_pred             CCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcccC
Q 018529          170 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN  249 (354)
Q Consensus       170 ~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~  249 (354)
                      ..+|.|+|.|.+|...+..+...|. .|++.++++++.+.+.+.|+..   ..  +  ..+.+...  ..+|+||.++..
T Consensus        22 ~mkIgiIGlG~mG~~~A~~L~~~G~-~V~v~dr~~~~~~~l~~~g~~~---~~--s--~~e~~~~a--~~~DvVi~~vp~   91 (358)
T 4e21_A           22 SMQIGMIGLGRMGADMVRRLRKGGH-ECVVYDLNVNAVQALEREGIAG---AR--S--IEEFCAKL--VKPRVVWLMVPA   91 (358)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTTTCBC---CS--S--HHHHHHHS--CSSCEEEECSCG
T ss_pred             CCEEEEECchHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHCCCEE---eC--C--HHHHHhcC--CCCCEEEEeCCH
Confidence            3579999999999999888888998 9999999999999888777531   11  1  43444332  235888888876


Q ss_pred             hHhHHHHHHH----hhCCCceEEEEcC
Q 018529          250 IDNMISAFEC----VHDGWGVAVLVGV  272 (354)
Q Consensus       250 ~~~~~~~~~~----l~~~~g~~v~~g~  272 (354)
                      . ..+..++.    ++++ ..++.++.
T Consensus        92 ~-~v~~vl~~l~~~l~~g-~iiId~st  116 (358)
T 4e21_A           92 A-VVDSMLQRMTPLLAAN-DIVIDGGN  116 (358)
T ss_dssp             G-GHHHHHHHHGGGCCTT-CEEEECSS
T ss_pred             H-HHHHHHHHHHhhCCCC-CEEEeCCC
Confidence            4 44433333    3343 44544443

>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31

Probab=95.84  E-value=0.031  Score=51.14  Aligned_cols=107  Identities=13%  Similarity=0.140  Sum_probs=68.6

Q ss_pred             hhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-----------HhcC--CceE--EcCCCCC
Q 018529          161 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-----------KKFG--VTDF--VNTSEHD  225 (354)
Q Consensus       161 l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-----------~~lg--~~~v--~~~~~~~  225 (354)
                      +.....++++++||=+||| .|.+++.+|+..|...|++++.+++..+.+           +.+|  ...+  +......
T Consensus       234 ml~~l~l~~g~~VLDLGCG-sG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~~~  312 (433)
T 1u2z_A          234 VYQQCQLKKGDTFMDLGSG-VGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFV  312 (433)
T ss_dssp             HHHHTTCCTTCEEEEESCT-TSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCST
T ss_pred             HHHhcCCCCCCEEEEeCCC-cCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCccc
Confidence            3456678899999999998 488899999988866899999999865544           3356  3333  2111111


Q ss_pred             hhHHHHHHHHcCCCccEEEEc--ccCh---HhHHHHHHHhhCCCceEEEEcC
Q 018529          226 RPIQEVIAEMTNGGVDRSVEC--TGNI---DNMISAFECVHDGWGVAVLVGV  272 (354)
Q Consensus       226 ~~~~~~i~~~~~~~~dvv~d~--~g~~---~~~~~~~~~l~~~~g~~v~~g~  272 (354)
                      ..+  .+... .+.||+|+-.  ...+   ..+..+.+.|+++ |++++...
T Consensus       313 ~~~--~~~~~-~~~FDvIvvn~~l~~~d~~~~L~el~r~LKpG-G~lVi~d~  360 (433)
T 1u2z_A          313 DNN--RVAEL-IPQCDVILVNNFLFDEDLNKKVEKILQTAKVG-CKIISLKS  360 (433)
T ss_dssp             TCH--HHHHH-GGGCSEEEECCTTCCHHHHHHHHHHHTTCCTT-CEEEESSC
T ss_pred             ccc--ccccc-cCCCCEEEEeCccccccHHHHHHHHHHhCCCC-eEEEEeec
Confidence            101  11111 1369999952  2222   2356778889997 99988743

>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}

Probab=95.83  E-value=0.074  Score=42.51  Aligned_cols=99  Identities=18%  Similarity=0.170  Sum_probs=61.2

Q ss_pred             CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCceEEcCCCCChhHHHHHHHHcCCCccEE
Q 018529          168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRS  243 (354)
Q Consensus       168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv  243 (354)
                      .++++||=+|+|. |..++.++. .+..+|++++.+++..+.+++    .+.+.+-.. ..+  +.+.......+.+|+|
T Consensus        43 ~~~~~vLDlgcG~-G~~~~~~~~-~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~-~~d--~~~~~~~~~~~~fD~i  117 (189)
T 3p9n_A           43 LTGLAVLDLYAGS-GALGLEALS-RGAASVLFVESDQRSAAVIARNIEALGLSGATLR-RGA--VAAVVAAGTTSPVDLV  117 (189)
T ss_dssp             CTTCEEEEETCTT-CHHHHHHHH-TTCSEEEEEECCHHHHHHHHHHHHHHTCSCEEEE-ESC--HHHHHHHCCSSCCSEE
T ss_pred             CCCCEEEEeCCCc-CHHHHHHHH-CCCCeEEEEECCHHHHHHHHHHHHHcCCCceEEE-Ecc--HHHHHhhccCCCccEE
Confidence            5788999888753 455555555 466589999999988887755    344322111 122  4444433334589999


Q ss_pred             EEccc--C-----hHhHHHHHH--HhhCCCceEEEEcC
Q 018529          244 VECTG--N-----IDNMISAFE--CVHDGWGVAVLVGV  272 (354)
Q Consensus       244 ~d~~g--~-----~~~~~~~~~--~l~~~~g~~v~~g~  272 (354)
                      +-...  .     ...+..+.+  .|+++ |.+++.-.
T Consensus       118 ~~~~p~~~~~~~~~~~l~~~~~~~~L~pg-G~l~~~~~  154 (189)
T 3p9n_A          118 LADPPYNVDSADVDAILAALGTNGWTREG-TVAVVERA  154 (189)
T ss_dssp             EECCCTTSCHHHHHHHHHHHHHSSSCCTT-CEEEEEEE
T ss_pred             EECCCCCcchhhHHHHHHHHHhcCccCCC-eEEEEEec
Confidence            87422  1     134556666  78997 98876543

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=95.83  E-value=0.031  Score=48.12  Aligned_cols=79  Identities=20%  Similarity=0.256  Sum_probs=49.0

Q ss_pred             CCCeEEEEcC---ChhHHHHHHHHHHcCCcEEEEEcCChh---hHHHHH-hcCCceEE--cCCCCChhHHHHHHHHc--C
Q 018529          169 RGSSVAVFGL---GAVGLAAAEGARIAGASRIIGVDRSSK---RFEEAK-KFGVTDFV--NTSEHDRPIQEVIAEMT--N  237 (354)
Q Consensus       169 ~~~~vlI~G~---g~~G~~a~~~a~~~g~~~vi~v~~~~~---~~~~~~-~lg~~~v~--~~~~~~~~~~~~i~~~~--~  237 (354)
                      .++++||+|+   |++|...+..+...|+ +|++++++++   ..+.+. +.+....+  |..+. ..+.+.+++..  .
T Consensus        20 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~~   97 (285)
T 2p91_A           20 EGKRALITGVANERSIAYGIAKSFHREGA-QLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLD-EDIKNLKKFLEENW   97 (285)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCH-HHHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCH-HHHHHHHHHHHHHc
Confidence            4788999985   6999999888888899 8988888875   222222 23422222  33322 12222222221  2


Q ss_pred             CCccEEEEcccC
Q 018529          238 GGVDRSVECTGN  249 (354)
Q Consensus       238 ~~~dvv~d~~g~  249 (354)
                      +++|++++++|.
T Consensus        98 g~iD~lv~~Ag~  109 (285)
T 2p91_A           98 GSLDIIVHSIAY  109 (285)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999873

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=95.83  E-value=0.061  Score=50.48  Aligned_cols=80  Identities=18%  Similarity=0.220  Sum_probs=52.3

Q ss_pred             CCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhh-------HHHHHhcCCceE-EcCCCCC-hhHHHHHHHHc
Q 018529          167 PERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR-------FEEAKKFGVTDF-VNTSEHD-RPIQEVIAEMT  236 (354)
Q Consensus       167 ~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~-------~~~~~~lg~~~v-~~~~~~~-~~~~~~i~~~~  236 (354)
                      ++++.++||+|+ |.+|...+..+...|+.+|+.+.++...       .+.+++.|.... +..+-.+ ..+.+.+.+  
T Consensus       256 ~~~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~--  333 (511)
T 2z5l_A          256 WQPSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTA--  333 (511)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHH--
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhc--
Confidence            578899999987 9999998888888898678888787532       223344565322 2122122 123333333  


Q ss_pred             CCCccEEEEcccC
Q 018529          237 NGGVDRSVECTGN  249 (354)
Q Consensus       237 ~~~~dvv~d~~g~  249 (354)
                       +.+|+||+++|.
T Consensus       334 -~~ld~VVh~AGv  345 (511)
T 2z5l_A          334 -YPPNAVFHTAGI  345 (511)
T ss_dssp             -SCCSEEEECCCC
T ss_pred             -CCCcEEEECCcc
Confidence             579999999874

>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*

Probab=95.83  E-value=0.058  Score=44.89  Aligned_cols=102  Identities=16%  Similarity=0.086  Sum_probs=60.5

Q ss_pred             hhcCCCCCCeEEEEcCChhHHHHHHHHHHcC-CcEEEEEcCChhhHHHH----HhcCCceEEcCCCCChhHHHHHHHHcC
Q 018529          163 NVAKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEA----KKFGVTDFVNTSEHDRPIQEVIAEMTN  237 (354)
Q Consensus       163 ~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g-~~~vi~v~~~~~~~~~~----~~lg~~~v~~~~~~~~~~~~~i~~~~~  237 (354)
                      ....+++|++||=+|||+ |..+..+|...| ..+|++++.++...+.+    ++...-..+..+......   .. ...
T Consensus        70 ~~~~l~~g~~VLDlG~Gt-G~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r~nv~~i~~Da~~~~~---~~-~~~  144 (232)
T 3id6_C           70 KTNPIRKGTKVLYLGAAS-GTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRRPNIFPLLADARFPQS---YK-SVV  144 (232)
T ss_dssp             SCCSCCTTCEEEEETCTT-SHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHCTTEEEEECCTTCGGG---TT-TTC
T ss_pred             hhcCCCCCCEEEEEeecC-CHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhcCCeEEEEcccccchh---hh-ccc
Confidence            345689999999999865 667777887765 33999999999875332    222111112111111000   00 112


Q ss_pred             CCccEEEEcccChHh---H-HHHHHHhhCCCceEEEE
Q 018529          238 GGVDRSVECTGNIDN---M-ISAFECVHDGWGVAVLV  270 (354)
Q Consensus       238 ~~~dvv~d~~g~~~~---~-~~~~~~l~~~~g~~v~~  270 (354)
                      +.+|+||.....+..   + ..+.+.|+++ |++++.
T Consensus       145 ~~~D~I~~d~a~~~~~~il~~~~~~~LkpG-G~lvis  180 (232)
T 3id6_C          145 ENVDVLYVDIAQPDQTDIAIYNAKFFLKVN-GDMLLV  180 (232)
T ss_dssp             CCEEEEEECCCCTTHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             cceEEEEecCCChhHHHHHHHHHHHhCCCC-eEEEEE
Confidence            379999866544332   2 2334489997 998876

>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*

Probab=95.82  E-value=0.02  Score=49.44  Aligned_cols=71  Identities=14%  Similarity=0.084  Sum_probs=48.1

Q ss_pred             eEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcccChH
Q 018529          172 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNID  251 (354)
Q Consensus       172 ~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~~~  251 (354)
                      +|.|+|+|.+|...+..+.. |. .|++.++++++.+.+.+.|.... .    ..+.   +     ..+|+||.|+..+.
T Consensus         3 ~i~iiG~G~~G~~~a~~l~~-g~-~V~~~~~~~~~~~~~~~~g~~~~-~----~~~~---~-----~~~D~vi~~v~~~~   67 (289)
T 2cvz_A            3 KVAFIGLGAMGYPMAGHLAR-RF-PTLVWNRTFEKALRHQEEFGSEA-V----PLER---V-----AEARVIFTCLPTTR   67 (289)
T ss_dssp             CEEEECCSTTHHHHHHHHHT-TS-CEEEECSSTHHHHHHHHHHCCEE-C----CGGG---G-----GGCSEEEECCSSHH
T ss_pred             eEEEEcccHHHHHHHHHHhC-CC-eEEEEeCCHHHHHHHHHCCCccc-C----HHHH---H-----hCCCEEEEeCCChH
Confidence            58899999999987777777 98 79999999988887766564321 1    1001   1     13678888777654


Q ss_pred             hHHHHH
Q 018529          252 NMISAF  257 (354)
Q Consensus       252 ~~~~~~  257 (354)
                      .....+
T Consensus        68 ~~~~v~   73 (289)
T 2cvz_A           68 EVYEVA   73 (289)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            344433

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=95.82  E-value=0.024  Score=49.42  Aligned_cols=98  Identities=12%  Similarity=0.171  Sum_probs=61.1

Q ss_pred             CCCCeEEEEcCC-hhHHHHHHHHHHcCCcEEEEEcCChhhH-HHHHhcCCc--eEEcCC-CCChhHHHHHHHHcCCCccE
Q 018529          168 ERGSSVAVFGLG-AVGLAAAEGARIAGASRIIGVDRSSKRF-EEAKKFGVT--DFVNTS-EHDRPIQEVIAEMTNGGVDR  242 (354)
Q Consensus       168 ~~~~~vlI~G~g-~~G~~a~~~a~~~g~~~vi~v~~~~~~~-~~~~~lg~~--~v~~~~-~~~~~~~~~i~~~~~~~~dv  242 (354)
                      -.|.+++|+|+| .+|..+++++...|+ .|++++++..+. ++..+++..  ...... ....++.+.+++     +|+
T Consensus       175 l~gk~vvVIG~G~iVG~~~A~~L~~~gA-tVtv~nR~~~~l~~ra~~la~~~~~~t~~~~t~~~~L~e~l~~-----ADI  248 (320)
T 1edz_A          175 LYGKKCIVINRSEIVGRPLAALLANDGA-TVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSLD-----SDV  248 (320)
T ss_dssp             TTTCEEEEECCCTTTHHHHHHHHHTTSC-EEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHHH-----CSE
T ss_pred             CCCCEEEEECCCcchHHHHHHHHHHCCC-EEEEEeCchHHHHhHHHHHhhhcccccccccccHhHHHHHhcc-----CCE
Confidence            478999999997 569999999999999 888887774332 222233321  000000 000224444444     799


Q ss_pred             EEEcccChHh-HHHHHHHhhCCCceEEEEcCCC
Q 018529          243 SVECTGNIDN-MISAFECVHDGWGVAVLVGVPS  274 (354)
Q Consensus       243 v~d~~g~~~~-~~~~~~~l~~~~g~~v~~g~~~  274 (354)
                      ||.++|.+.. +...|  ++++ ..++.+|...
T Consensus       249 VIsAtg~p~~vI~~e~--vk~G-avVIDVgi~r  278 (320)
T 1edz_A          249 VITGVPSENYKFPTEY--IKEG-AVCINFACTK  278 (320)
T ss_dssp             EEECCCCTTCCBCTTT--SCTT-EEEEECSSSC
T ss_pred             EEECCCCCcceeCHHH--cCCC-eEEEEcCCCc
Confidence            9999998654 33322  5775 6777777653

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=95.82  E-value=0.053  Score=50.64  Aligned_cols=84  Identities=19%  Similarity=0.238  Sum_probs=54.3

Q ss_pred             CCCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhh-------HHHHHhcCCce-EEcCCCCC-hhHHHHHHHH
Q 018529          166 KPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR-------FEEAKKFGVTD-FVNTSEHD-RPIQEVIAEM  235 (354)
Q Consensus       166 ~~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~-------~~~~~~lg~~~-v~~~~~~~-~~~~~~i~~~  235 (354)
                      .++++.++||+|+ |++|...+..+...|+.+|+.+.++...       .+.+++.|... ++..+-.+ ..+.+.+.+.
T Consensus       222 ~~~~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i  301 (486)
T 2fr1_A          222 EWKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGI  301 (486)
T ss_dssp             CCCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTS
T ss_pred             CcCCCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHH
Confidence            3578899999987 9999998888888898668888887642       12344456532 22222122 2234444444


Q ss_pred             cC-CCccEEEEcccC
Q 018529          236 TN-GGVDRSVECTGN  249 (354)
Q Consensus       236 ~~-~~~dvv~d~~g~  249 (354)
                      .. +.+|.||+++|.
T Consensus       302 ~~~g~ld~VIh~AG~  316 (486)
T 2fr1_A          302 GDDVPLSAVFHAAAT  316 (486)
T ss_dssp             CTTSCEEEEEECCCC
T ss_pred             HhcCCCcEEEECCcc
Confidence            22 278999999884

>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}

Probab=95.81  E-value=0.044  Score=49.98  Aligned_cols=133  Identities=15%  Similarity=0.103  Sum_probs=82.4

Q ss_pred             eEEEEcCChhHHHHHHHHHHc---------CCcEEEEEcCChhhHH-HHHhcCCceEEcCCCCChhHHHHHHHHcCCCcc
Q 018529          172 SVAVFGLGAVGLAAAEGARIA---------GASRIIGVDRSSKRFE-EAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVD  241 (354)
Q Consensus       172 ~vlI~G~g~~G~~a~~~a~~~---------g~~~vi~v~~~~~~~~-~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~d  241 (354)
                      +|.|+|+|.+|...+...+..         +++.|-+.++++++.+ +++++|...++.  +    +.+.+.+   ..+|
T Consensus        28 rvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~~~~~a~~~a~~~~~~~~y~--d----~~~ll~~---~~vD   98 (412)
T 4gqa_A           28 NIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQDQAMAERHAAKLGAEKAYG--D----WRELVND---PQVD   98 (412)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECSSHHHHHHHHHHHTCSEEES--S----HHHHHHC---TTCC
T ss_pred             eEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcCCHHHHHHHHHHcCCCeEEC--C----HHHHhcC---CCCC
Confidence            688999999998766666543         3423444567777755 457789876542  2    4444432   3799


Q ss_pred             EEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecc-hhhhc--cccE-EEEEeccCCCCCCCHHHHHHHHHccC
Q 018529          242 RSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTK-PINVL--NERT-LKGTFFGNYKPRTDLPSVVDMYMNKQ  317 (354)
Q Consensus       242 vv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~-~~~~~--~~~~-i~g~~~~~~~~~~~~~~~~~~~~~~~  317 (354)
                      +|+.|+......+.+..+|..  |+=|++.-+.....-... .....  +++. ..++.   .+....++.+-+++.+|.
T Consensus        99 ~V~I~tp~~~H~~~~~~al~a--GkhVl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~~---~R~~p~~~~~k~~i~~G~  173 (412)
T 4gqa_A           99 VVDITSPNHLHYTMAMAAIAA--GKHVYCEKPLAVNEQQAQEMAQAARRAGVKTMVAFN---NIKTPAALLAKQIIARGD  173 (412)
T ss_dssp             EEEECSCGGGHHHHHHHHHHT--TCEEEEESCSCSSHHHHHHHHHHHHHHTCCEEEECG---GGTSHHHHHHHHHHHHTT
T ss_pred             EEEECCCcHHHHHHHHHHHHc--CCCeEeecCCcCCHHHHHHHHHHHHHhCCeeeeccc---eecCHHHHHHHHHHhcCC
Confidence            999999988888899999987  677888765421111110 01111  2333 33332   233345778888888886


Q ss_pred             C
Q 018529          318 L  318 (354)
Q Consensus       318 ~  318 (354)
                      +
T Consensus       174 i  174 (412)
T 4gqa_A          174 I  174 (412)
T ss_dssp             T
T ss_pred             c
Confidence            5

>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}

Probab=95.80  E-value=0.029  Score=46.81  Aligned_cols=103  Identities=17%  Similarity=0.236  Sum_probs=66.7

Q ss_pred             hhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCc-eEEcCCCCChhHHHHHHHHcCCC
Q 018529          161 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT-DFVNTSEHDRPIQEVIAEMTNGG  239 (354)
Q Consensus       161 l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~-~v~~~~~~~~~~~~~i~~~~~~~  239 (354)
                      +.......++.+||-+|+|. |..+..+++. |..+|++++.+++..+.+++.... .+- ....+  +.+ + ....+.
T Consensus        35 l~~~~~~~~~~~vLdiG~G~-G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~~~~d--~~~-~-~~~~~~  107 (243)
T 3bkw_A           35 LRAMLPEVGGLRIVDLGCGF-GWFCRWAHEH-GASYVLGLDLSEKMLARARAAGPDTGIT-YERAD--LDK-L-HLPQDS  107 (243)
T ss_dssp             HHHHSCCCTTCEEEEETCTT-CHHHHHHHHT-TCSEEEEEESCHHHHHHHHHTSCSSSEE-EEECC--GGG-C-CCCTTC
T ss_pred             HHHhccccCCCEEEEEcCcC-CHHHHHHHHC-CCCeEEEEcCCHHHHHHHHHhcccCCce-EEEcC--hhh-c-cCCCCC
Confidence            34455667889999999875 6667777776 555899999999999988775432 111 11111  110 0 012237


Q ss_pred             ccEEEEcccC------hHhHHHHHHHhhCCCceEEEEc
Q 018529          240 VDRSVECTGN------IDNMISAFECVHDGWGVAVLVG  271 (354)
Q Consensus       240 ~dvv~d~~g~------~~~~~~~~~~l~~~~g~~v~~g  271 (354)
                      +|+|+....-      ...++.+.+.|+++ |++++..
T Consensus       108 fD~v~~~~~l~~~~~~~~~l~~~~~~L~pg-G~l~~~~  144 (243)
T 3bkw_A          108 FDLAYSSLALHYVEDVARLFRTVHQALSPG-GHFVFST  144 (243)
T ss_dssp             EEEEEEESCGGGCSCHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             ceEEEEeccccccchHHHHHHHHHHhcCcC-cEEEEEe
Confidence            9999875321      24678888999997 9988653

>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}

Probab=95.79  E-value=0.062  Score=48.63  Aligned_cols=98  Identities=17%  Similarity=0.179  Sum_probs=65.9

Q ss_pred             CCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCc-eEEcCCCCChhHHHHHHHHcCCCcc
Q 018529          167 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT-DFVNTSEHDRPIQEVIAEMTNGGVD  241 (354)
Q Consensus       167 ~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~-~v~~~~~~~~~~~~~i~~~~~~~~d  241 (354)
                      +++|++||=.|||. |..++.+|+. |+ .|++++.+++..+.+++    .|.. .+.   ..+  ..+.+.... +.||
T Consensus       212 ~~~g~~VLDlg~Gt-G~~sl~~a~~-ga-~V~avDis~~al~~a~~n~~~ng~~~~~~---~~D--~~~~l~~~~-~~fD  282 (393)
T 4dmg_A          212 VRPGERVLDVYSYV-GGFALRAARK-GA-YALAVDKDLEALGVLDQAALRLGLRVDIR---HGE--ALPTLRGLE-GPFH  282 (393)
T ss_dssp             CCTTCEEEEESCTT-THHHHHHHHT-TC-EEEEEESCHHHHHHHHHHHHHHTCCCEEE---ESC--HHHHHHTCC-CCEE
T ss_pred             hcCCCeEEEcccch-hHHHHHHHHc-CC-eEEEEECCHHHHHHHHHHHHHhCCCCcEE---Ecc--HHHHHHHhc-CCCC
Confidence            45699999887753 5556666664 88 59999999999888765    3543 233   222  545554443 3599


Q ss_pred             EEEEcccC---------------hHhHHHHHHHhhCCCceEEEEcCCC
Q 018529          242 RSVECTGN---------------IDNMISAFECVHDGWGVAVLVGVPS  274 (354)
Q Consensus       242 vv~d~~g~---------------~~~~~~~~~~l~~~~g~~v~~g~~~  274 (354)
                      +|+--.+.               ...+..+.+.|+++ |.++++....
T Consensus       283 ~Ii~dpP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpG-G~Lv~~s~s~  329 (393)
T 4dmg_A          283 HVLLDPPTLVKRPEELPAMKRHLVDLVREALRLLAEE-GFLWLSSCSY  329 (393)
T ss_dssp             EEEECCCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEE-EEEEEEECCT
T ss_pred             EEEECCCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEEECCC
Confidence            99864332               25677888999997 9998665543

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=95.79  E-value=0.014  Score=49.79  Aligned_cols=71  Identities=20%  Similarity=0.129  Sum_probs=46.4

Q ss_pred             CCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEccc
Q 018529          170 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  248 (354)
Q Consensus       170 ~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g  248 (354)
                      +++|||+|+ |.+|...+..+...|. +|+++++++.+.+   ..++ ..+..+=.+.   +.+.++.. ++|+||+++|
T Consensus         3 ~k~vlVTGasg~IG~~la~~L~~~G~-~V~~~~r~~~~~~---~~~~-~~~~~Dl~d~---~~~~~~~~-~~D~vi~~Ag   73 (267)
T 3rft_A            3 MKRLLVTGAAGQLGRVMRERLAPMAE-ILRLADLSPLDPA---GPNE-ECVQCDLADA---NAVNAMVA-GCDGIVHLGG   73 (267)
T ss_dssp             EEEEEEESTTSHHHHHHHHHTGGGEE-EEEEEESSCCCCC---CTTE-EEEECCTTCH---HHHHHHHT-TCSEEEECCS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcCC-EEEEEecCCcccc---CCCC-EEEEcCCCCH---HHHHHHHc-CCCEEEECCC
Confidence            468999997 9999998888888898 8999988876543   1122 1221111221   23333333 6899999987


Q ss_pred             C
Q 018529          249 N  249 (354)
Q Consensus       249 ~  249 (354)
                      .
T Consensus        74 ~   74 (267)
T 3rft_A           74 I   74 (267)
T ss_dssp             C
T ss_pred             C
Confidence            4

>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2

Probab=95.79  E-value=0.024  Score=48.41  Aligned_cols=93  Identities=15%  Similarity=0.223  Sum_probs=62.3

Q ss_pred             cccchhhhhhhhhhhcC-CCCCCeEEEEcCC-hhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChh
Q 018529          150 LSCGVSTGLGATLNVAK-PERGSSVAVFGLG-AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRP  227 (354)
Q Consensus       150 l~~~~~~a~~~l~~~~~-~~~~~~vlI~G~g-~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~  227 (354)
                      +||+.......+ +... --.|.+++|+|.| .+|.-+++++...|+ .|+.+.+..                   .  +
T Consensus       139 ~PcTp~gi~~ll-~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gA-tVtv~hs~t-------------------~--~  195 (288)
T 1b0a_A          139 RPCTPRGIVTLL-ERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGC-TTTVTHRFT-------------------K--N  195 (288)
T ss_dssp             CCHHHHHHHHHH-HHTTCCCTTCEEEEECCCTTTHHHHHHHHHTTTC-EEEEECSSC-------------------S--C
T ss_pred             CCCcHHHHHHHH-HHcCCCCCCCEEEEECCChHHHHHHHHHHHHCCC-eEEEEeCCc-------------------h--h
Confidence            454443333333 3333 3578999999987 579999999999999 788775332                   1  2


Q ss_pred             HHHHHHHHcCCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCC
Q 018529          228 IQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVP  273 (354)
Q Consensus       228 ~~~~i~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~  273 (354)
                      +.+.+++     +|+||.++|.+.++..  +.++++ ..++.+|..
T Consensus       196 L~~~~~~-----ADIVI~Avg~p~lI~~--~~vk~G-avVIDVgi~  233 (288)
T 1b0a_A          196 LRHHVEN-----ADLLIVAVGKPGFIPG--DWIKEG-AIVIDVGIN  233 (288)
T ss_dssp             HHHHHHH-----CSEEEECSCCTTCBCT--TTSCTT-CEEEECCCE
T ss_pred             HHHHhcc-----CCEEEECCCCcCcCCH--HHcCCC-cEEEEccCC
Confidence            5555544     7999999998755332  236775 777777754

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=95.77  E-value=0.051  Score=47.22  Aligned_cols=94  Identities=14%  Similarity=0.146  Sum_probs=57.4

Q ss_pred             CCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCC-----hhhHHHHHh---cCCceEEcCCCCChhHHHHHHHHcCCCc
Q 018529          170 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRS-----SKRFEEAKK---FGVTDFVNTSEHDRPIQEVIAEMTNGGV  240 (354)
Q Consensus       170 ~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~-----~~~~~~~~~---lg~~~v~~~~~~~~~~~~~i~~~~~~~~  240 (354)
                      ..+|||+|+ |.+|...+..+...|. +|++++++     +++.+.+++   .++. ++..+-.+  . +.+.+... ++
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~d--~-~~l~~~~~-~~   77 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGH-PTYVLFRPEVVSNIDKVQMLLYFKQLGAK-LIEASLDD--H-QRLVDALK-QV   77 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTC-CEEEECCSCCSSCHHHHHHHHHHHTTTCE-EECCCSSC--H-HHHHHHHT-TC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCC-cEEEEECCCcccchhHHHHHHHHHhCCeE-EEeCCCCC--H-HHHHHHHh-CC
Confidence            357999997 9999999999888898 88888887     445444432   3543 22222122  1 23333333 59


Q ss_pred             cEEEEcccCh------HhHHHHHHHhhCC--CceEEE
Q 018529          241 DRSVECTGNI------DNMISAFECVHDG--WGVAVL  269 (354)
Q Consensus       241 dvv~d~~g~~------~~~~~~~~~l~~~--~g~~v~  269 (354)
                      |+||.+++..      .....+++.+...  .++++.
T Consensus        78 d~vi~~a~~~~~~~~~~~~~~l~~aa~~~g~v~~~v~  114 (313)
T 1qyd_A           78 DVVISALAGGVLSHHILEQLKLVEAIKEAGNIKRFLP  114 (313)
T ss_dssp             SEEEECCCCSSSSTTTTTHHHHHHHHHHSCCCSEEEC
T ss_pred             CEEEECCccccchhhHHHHHHHHHHHHhcCCCceEEe
Confidence            9999998742      2334455554443  146763

>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}

Probab=95.77  E-value=0.036  Score=49.08  Aligned_cols=91  Identities=16%  Similarity=0.147  Sum_probs=62.8

Q ss_pred             CeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcccCh
Q 018529          171 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI  250 (354)
Q Consensus       171 ~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~~  250 (354)
                      .+|.|+|.|.+|...+..++..|. .|++.++++++.+.++++|+...   .  +  ..+.+.+.. .+.|+||-++.. 
T Consensus         9 ~kIgIIG~G~mG~slA~~L~~~G~-~V~~~dr~~~~~~~a~~~G~~~~---~--~--~~e~~~~a~-~~aDlVilavP~-   78 (341)
T 3ktd_A            9 RPVCILGLGLIGGSLLRDLHAANH-SVFGYNRSRSGAKSAVDEGFDVS---A--D--LEATLQRAA-AEDALIVLAVPM-   78 (341)
T ss_dssp             SCEEEECCSHHHHHHHHHHHHTTC-CEEEECSCHHHHHHHHHTTCCEE---S--C--HHHHHHHHH-HTTCEEEECSCH-
T ss_pred             CEEEEEeecHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeee---C--C--HHHHHHhcc-cCCCEEEEeCCH-
Confidence            579999999999999999999998 89999999999999999997421   1  1  334443320 147999999985 


Q ss_pred             HhHHHHHHH---hhCCCceEEEEcC
Q 018529          251 DNMISAFEC---VHDGWGVAVLVGV  272 (354)
Q Consensus       251 ~~~~~~~~~---l~~~~g~~v~~g~  272 (354)
                      ..+...++.   ++++ ..++.++.
T Consensus        79 ~~~~~vl~~l~~~~~~-~iv~Dv~S  102 (341)
T 3ktd_A           79 TAIDSLLDAVHTHAPN-NGFTDVVS  102 (341)
T ss_dssp             HHHHHHHHHHHHHCTT-CCEEECCS
T ss_pred             HHHHHHHHHHHccCCC-CEEEEcCC
Confidence            333333332   3443 45555544

>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}

Probab=95.77  E-value=0.021  Score=48.06  Aligned_cols=105  Identities=16%  Similarity=0.202  Sum_probs=67.6

Q ss_pred             hhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCC-ceEEcCCCCChhHHHHHHHHc
Q 018529          158 LGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV-TDFVNTSEHDRPIQEVIAEMT  236 (354)
Q Consensus       158 ~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~-~~v~~~~~~~~~~~~~i~~~~  236 (354)
                      +..+.......++.+||-+|+|. |..+..+++. |..+|++++.+++..+.+++... ..+- +...+  +.+ + .+.
T Consensus        33 ~~~l~~~~~~~~~~~vLD~GcG~-G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~~~~d--~~~-~-~~~  105 (253)
T 3g5l_A           33 WHELKKMLPDFNQKTVLDLGCGF-GWHCIYAAEH-GAKKVLGIDLSERMLTEAKRKTTSPVVC-YEQKA--IED-I-AIE  105 (253)
T ss_dssp             HHHHHTTCCCCTTCEEEEETCTT-CHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHCCCTTEE-EEECC--GGG-C-CCC
T ss_pred             HHHHHHhhhccCCCEEEEECCCC-CHHHHHHHHc-CCCEEEEEECCHHHHHHHHHhhccCCeE-EEEcc--hhh-C-CCC
Confidence            33344455566889999999875 7777777776 44499999999999988877432 1111 11111  100 0 011


Q ss_pred             CCCccEEEEccc------ChHhHHHHHHHhhCCCceEEEE
Q 018529          237 NGGVDRSVECTG------NIDNMISAFECVHDGWGVAVLV  270 (354)
Q Consensus       237 ~~~~dvv~d~~g------~~~~~~~~~~~l~~~~g~~v~~  270 (354)
                      .+.+|+|+....      -...+..+.+.|+++ |++++.
T Consensus       106 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lkpg-G~l~~~  144 (253)
T 3g5l_A          106 PDAYNVVLSSLALHYIASFDDICKKVYINLKSS-GSFIFS  144 (253)
T ss_dssp             TTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             CCCeEEEEEchhhhhhhhHHHHHHHHHHHcCCC-cEEEEE
Confidence            247999987532      124678888999997 998875

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=95.76  E-value=0.073  Score=47.43  Aligned_cols=36  Identities=19%  Similarity=0.236  Sum_probs=30.5

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHH--cCCcEEEEEcCChh
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARI--AGASRIIGVDRSSK  205 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~--~g~~~vi~v~~~~~  205 (354)
                      .+.+|||+|+ |.+|...+..+..  .|. +|++++++..
T Consensus         9 ~~~~vlVTGatG~IG~~l~~~L~~~~~g~-~V~~~~r~~~   47 (362)
T 3sxp_A            9 ENQTILITGGAGFVGSNLAFHFQENHPKA-KVVVLDKFRS   47 (362)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHCTTS-EEEEEECCCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhhCCCC-eEEEEECCCc
Confidence            4679999987 9999998888888  898 8999987654

>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...

Probab=95.76  E-value=0.0091  Score=49.38  Aligned_cols=100  Identities=18%  Similarity=0.192  Sum_probs=62.7

Q ss_pred             CCCCCCeEEEEcCChhHHHHHHHHHHc--CCcEEEEEcCChhhHHHHHh----cCCce-EEcCCCCChhHHHHHHHHcC-
Q 018529          166 KPERGSSVAVFGLGAVGLAAAEGARIA--GASRIIGVDRSSKRFEEAKK----FGVTD-FVNTSEHDRPIQEVIAEMTN-  237 (354)
Q Consensus       166 ~~~~~~~vlI~G~g~~G~~a~~~a~~~--g~~~vi~v~~~~~~~~~~~~----lg~~~-v~~~~~~~~~~~~~i~~~~~-  237 (354)
                      ...++++||=+|+|. |..++.+|+.+  +. +|++++.+++..+.+++    .|... +- ....+  ..+.+..+.. 
T Consensus        55 ~~~~~~~vLdiG~G~-G~~~~~la~~~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~v~-~~~~d--~~~~l~~~~~~  129 (221)
T 3u81_A           55 REYSPSLVLELGAYC-GYSAVRMARLLQPGA-RLLTMEINPDCAAITQQMLNFAGLQDKVT-ILNGA--SQDLIPQLKKK  129 (221)
T ss_dssp             HHHCCSEEEEECCTT-SHHHHHHHTTSCTTC-EEEEEESCHHHHHHHHHHHHHHTCGGGEE-EEESC--HHHHGGGTTTT
T ss_pred             HhcCCCEEEEECCCC-CHHHHHHHHhCCCCC-EEEEEeCChHHHHHHHHHHHHcCCCCceE-EEECC--HHHHHHHHHHh
Confidence            345678999999864 77888888865  45 99999999998887765    45431 21 11222  4343444332 


Q ss_pred             ---CCccEEEEcccChHh------HHHHHHHhhCCCceEEEEcC
Q 018529          238 ---GGVDRSVECTGNIDN------MISAFECVHDGWGVAVLVGV  272 (354)
Q Consensus       238 ---~~~dvv~d~~g~~~~------~~~~~~~l~~~~g~~v~~g~  272 (354)
                         +.||+||-.......      ++.+ +.|+++ |.+++-..
T Consensus       130 ~~~~~fD~V~~d~~~~~~~~~~~~~~~~-~~Lkpg-G~lv~~~~  171 (221)
T 3u81_A          130 YDVDTLDMVFLDHWKDRYLPDTLLLEKC-GLLRKG-TVLLADNV  171 (221)
T ss_dssp             SCCCCCSEEEECSCGGGHHHHHHHHHHT-TCCCTT-CEEEESCC
T ss_pred             cCCCceEEEEEcCCcccchHHHHHHHhc-cccCCC-eEEEEeCC
Confidence               479999864432111      2222 678997 88876543

>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53

Probab=95.75  E-value=0.1  Score=42.66  Aligned_cols=98  Identities=14%  Similarity=0.099  Sum_probs=64.8

Q ss_pred             CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCceEEcCCCCChhHHHHHHH-HcCCCccE
Q 018529          168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAE-MTNGGVDR  242 (354)
Q Consensus       168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~-~~~~~~dv  242 (354)
                      .++..||=+|+|. |..++.+|+......|++++.+++..+.+++    .|...+-.... +  +.+ +.. +..+.+|.
T Consensus        37 ~~~~~vLDiGcG~-G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~-d--~~~-l~~~~~~~~~d~  111 (213)
T 2fca_A           37 NDNPIHIEVGTGK-GQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNI-D--ADT-LTDVFEPGEVKR  111 (213)
T ss_dssp             SCCCEEEEECCTT-SHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECC-C--GGG-HHHHCCTTSCCE
T ss_pred             CCCceEEEEecCC-CHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeC-C--HHH-HHhhcCcCCcCE
Confidence            3567788789874 8888888888643399999999988877654    45433321222 1  111 222 22347898


Q ss_pred             EEEcccC--------------hHhHHHHHHHhhCCCceEEEEc
Q 018529          243 SVECTGN--------------IDNMISAFECVHDGWGVAVLVG  271 (354)
Q Consensus       243 v~d~~g~--------------~~~~~~~~~~l~~~~g~~v~~g  271 (354)
                      |+-....              ...+..+.+.|+++ |.+++..
T Consensus       112 v~~~~~~p~~~~~~~~~rl~~~~~l~~~~~~Lkpg-G~l~~~t  153 (213)
T 2fca_A          112 VYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKG-GSIHFKT  153 (213)
T ss_dssp             EEEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTS-CEEEEEE
T ss_pred             EEEECCCCCcCccccccccCcHHHHHHHHHHcCCC-CEEEEEe
Confidence            8754432              35688899999997 9988763

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=95.75  E-value=0.047  Score=45.48  Aligned_cols=95  Identities=11%  Similarity=0.103  Sum_probs=60.4

Q ss_pred             CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcc
Q 018529          168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  247 (354)
Q Consensus       168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~  247 (354)
                      ....+++|.|+|.+|...++.+...|.  |+++++++++.+.++ .|.. ++..+..+.   +.+++..-.++|.|+-++
T Consensus         7 ~~~~~viI~G~G~~G~~la~~L~~~g~--v~vid~~~~~~~~~~-~~~~-~i~gd~~~~---~~l~~a~i~~ad~vi~~~   79 (234)
T 2aef_A            7 AKSRHVVICGWSESTLECLRELRGSEV--FVLAEDENVRKKVLR-SGAN-FVHGDPTRV---SDLEKANVRGARAVIVDL   79 (234)
T ss_dssp             ---CEEEEESCCHHHHHHHHHSTTSEE--EEEESCGGGHHHHHH-TTCE-EEESCTTCH---HHHHHTTCTTCSEEEECC
T ss_pred             CCCCEEEEECCChHHHHHHHHHHhCCe--EEEEECCHHHHHHHh-cCCe-EEEcCCCCH---HHHHhcCcchhcEEEEcC
Confidence            456789999999999988888877775  889999999888877 6654 333333321   234444223799999999


Q ss_pred             cChHh---HHHHHHHhhCCCceEEEE
Q 018529          248 GNIDN---MISAFECVHDGWGVAVLV  270 (354)
Q Consensus       248 g~~~~---~~~~~~~l~~~~g~~v~~  270 (354)
                      +..+.   .....+.+.+. .+++.-
T Consensus        80 ~~d~~n~~~~~~a~~~~~~-~~iia~  104 (234)
T 2aef_A           80 ESDSETIHCILGIRKIDES-VRIIAE  104 (234)
T ss_dssp             SCHHHHHHHHHHHHHHCSS-SEEEEE
T ss_pred             CCcHHHHHHHHHHHHHCCC-CeEEEE
Confidence            87432   12233445553 455543

>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*

Probab=95.74  E-value=0.069  Score=46.13  Aligned_cols=74  Identities=24%  Similarity=0.245  Sum_probs=53.1

Q ss_pred             eEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcccChH
Q 018529          172 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNID  251 (354)
Q Consensus       172 ~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~~~  251 (354)
                      +|.|+|+|.+|...+..+...|. .|++.++++++.+.+.+.|+..   ..+    ..+.+.     ..|+||.+++.+.
T Consensus         2 ~i~iiG~G~mG~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~---~~~----~~~~~~-----~~Dvvi~~vp~~~   68 (296)
T 2gf2_A            2 PVGFIGLGNMGNPMAKNLMKHGY-PLIIYDVFPDACKEFQDAGEQV---VSS----PADVAE-----KADRIITMLPTSI   68 (296)
T ss_dssp             CEEEECCSTTHHHHHHHHHHTTC-CEEEECSSTHHHHHHHTTTCEE---CSS----HHHHHH-----HCSEEEECCSSHH
T ss_pred             eEEEEeccHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCee---cCC----HHHHHh-----cCCEEEEeCCCHH
Confidence            58899999999998888888888 8999999999988888776531   111    333332     2688888886655


Q ss_pred             hHHHHHH
Q 018529          252 NMISAFE  258 (354)
Q Consensus       252 ~~~~~~~  258 (354)
                      ..+..+.
T Consensus        69 ~~~~v~~   75 (296)
T 2gf2_A           69 NAIEAYS   75 (296)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHh
Confidence            5555554

>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}

Probab=95.73  E-value=0.0093  Score=55.19  Aligned_cols=105  Identities=19%  Similarity=0.245  Sum_probs=67.4

Q ss_pred             hhcCCCCCCeEEEEcCChhHHHHHHHHHHcCC-cEEEEEcCChhhHHHHHh----cCCceEEcCCCCChhHHHHHHHHcC
Q 018529          163 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTN  237 (354)
Q Consensus       163 ~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~-~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~~~~  237 (354)
                      ....+++|++||-+|+|+ |..+.+++..++. ..|++++.++++.+.+++    +|...+.....+-..+.   ..+..
T Consensus       253 ~~l~~~~g~~VLDlgaG~-G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~---~~~~~  328 (450)
T 2yxl_A          253 IVLDPKPGETVVDLAAAP-GGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAP---EIIGE  328 (450)
T ss_dssp             HHHCCCTTCEEEESSCTT-CHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCS---SSSCS
T ss_pred             HhcCCCCcCEEEEeCCCc-cHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcc---hhhcc
Confidence            345688999999888876 7777788887643 499999999999887654    46643321111100010   00111


Q ss_pred             CCccEEEE---cccC-------------------------hHhHHHHHHHhhCCCceEEEEcC
Q 018529          238 GGVDRSVE---CTGN-------------------------IDNMISAFECVHDGWGVAVLVGV  272 (354)
Q Consensus       238 ~~~dvv~d---~~g~-------------------------~~~~~~~~~~l~~~~g~~v~~g~  272 (354)
                      +.||+|+.   |.|.                         ...+..+.+.|+++ |++++...
T Consensus       329 ~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpG-G~lvy~tc  390 (450)
T 2yxl_A          329 EVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPG-GRLLYTTC  390 (450)
T ss_dssp             SCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEE-EEEEEEES
T ss_pred             CCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCC-cEEEEEeC
Confidence            36999985   3332                         24577788889997 99886543

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=95.73  E-value=0.023  Score=50.10  Aligned_cols=76  Identities=20%  Similarity=0.202  Sum_probs=50.5

Q ss_pred             CCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhc-----C--CceE--EcCCCCChhHHHHHHHHc
Q 018529          167 PERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF-----G--VTDF--VNTSEHDRPIQEVIAEMT  236 (354)
Q Consensus       167 ~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~l-----g--~~~v--~~~~~~~~~~~~~i~~~~  236 (354)
                      ..++.+|||+|+ |.+|...+..+...|. +|++++++.++.+.+.+.     +  +..+  .|..+.+     .+.++.
T Consensus         8 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~-----~~~~~~   81 (342)
T 1y1p_A            8 LPEGSLVLVTGANGFVASHVVEQLLEHGY-KVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQG-----AYDEVI   81 (342)
T ss_dssp             SCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTT-----TTTTTT
T ss_pred             CCCCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChH-----HHHHHH
Confidence            345789999997 9999999988888898 899998988776544321     2  2222  1222221     122222


Q ss_pred             CCCccEEEEcccC
Q 018529          237 NGGVDRSVECTGN  249 (354)
Q Consensus       237 ~~~~dvv~d~~g~  249 (354)
                      . ++|+||.+++.
T Consensus        82 ~-~~d~vih~A~~   93 (342)
T 1y1p_A           82 K-GAAGVAHIASV   93 (342)
T ss_dssp             T-TCSEEEECCCC
T ss_pred             c-CCCEEEEeCCC
Confidence            2 68999999874

>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*

Probab=95.73  E-value=0.049  Score=48.09  Aligned_cols=88  Identities=17%  Similarity=0.108  Sum_probs=63.0

Q ss_pred             CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEccc
Q 018529          169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  248 (354)
Q Consensus       169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g  248 (354)
                      .|.+|.|+|.|.+|...++.++.+|. +|++.+++.++.  ++++ +..    .+ +  +.+.+.     ..|+|+.+++
T Consensus       145 ~g~~vgIiG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~~--~~~~-~~~----~~-~--l~ell~-----~aDvV~l~~p  208 (333)
T 1j4a_A          145 RDQVVGVVGTGHIGQVFMQIMEGFGA-KVITYDIFRNPE--LEKK-GYY----VD-S--LDDLYK-----QADVISLHVP  208 (333)
T ss_dssp             GGSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCHH--HHHT-TCB----CS-C--HHHHHH-----HCSEEEECSC
T ss_pred             CCCEEEEEccCHHHHHHHHHHHHCCC-EEEEECCCcchh--HHhh-Cee----cC-C--HHHHHh-----hCCEEEEcCC
Confidence            47899999999999999999999999 899999887665  2332 221    11 1  434333     2799999987


Q ss_pred             ChH----hH-HHHHHHhhCCCceEEEEcCC
Q 018529          249 NID----NM-ISAFECVHDGWGVAVLVGVP  273 (354)
Q Consensus       249 ~~~----~~-~~~~~~l~~~~g~~v~~g~~  273 (354)
                      ..+    .+ ...++.++++ +.++.++..
T Consensus       209 ~~~~t~~li~~~~l~~mk~g-a~lIn~arg  237 (333)
T 1j4a_A          209 DVPANVHMINDESIAKMKQD-VVIVNVSRG  237 (333)
T ss_dssp             CCGGGTTCBSHHHHHHSCTT-EEEEECSCG
T ss_pred             CcHHHHHHHhHHHHhhCCCC-cEEEECCCC
Confidence            432    12 4567889997 888888764

>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*

Probab=95.73  E-value=0.039  Score=48.52  Aligned_cols=98  Identities=14%  Similarity=0.095  Sum_probs=65.0

Q ss_pred             CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCC--------ceEEcCCCCChhHHHHHHHHcCCC
Q 018529          168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV--------TDFVNTSEHDRPIQEVIAEMTNGG  239 (354)
Q Consensus       168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~--------~~v~~~~~~~~~~~~~i~~~~~~~  239 (354)
                      .++.+||++|+|. |..+..+++..+..+|++++.+++..+.+++.-.        .++- ....+  ..+.+.. ..+.
T Consensus       115 ~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~-~~~~D--~~~~l~~-~~~~  189 (321)
T 2pt6_A          115 KEPKNVLVVGGGD-GGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVN-VFIED--ASKFLEN-VTNT  189 (321)
T ss_dssp             SSCCEEEEEECTT-CHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEE-EEESC--HHHHHHH-CCSC
T ss_pred             CCCCEEEEEcCCc-cHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEE-EEEcc--HHHHHhh-cCCC
Confidence            4568999998864 6677777877654599999999999988876311        1111 11112  4443433 2347


Q ss_pred             ccEEEEccc----------ChHhHHHHHHHhhCCCceEEEEc
Q 018529          240 VDRSVECTG----------NIDNMISAFECVHDGWGVAVLVG  271 (354)
Q Consensus       240 ~dvv~d~~g----------~~~~~~~~~~~l~~~~g~~v~~g  271 (354)
                      ||+|+....          ..+.++.+.+.|+++ |.+++..
T Consensus       190 fDvIi~d~~~p~~~~~~l~~~~~l~~~~~~Lkpg-G~lv~~~  230 (321)
T 2pt6_A          190 YDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPN-GYCVAQC  230 (321)
T ss_dssp             EEEEEEECCCSSSGGGGGSSHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             ceEEEECCcCCCCcchhhhHHHHHHHHHHhcCCC-cEEEEEc
Confidence            999984321          146788899999997 9988754

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=95.73  E-value=0.051  Score=46.98  Aligned_cols=74  Identities=24%  Similarity=0.246  Sum_probs=49.3

Q ss_pred             CCeEEEEcC-ChhHHHHHHHHHHcC-CcEEEEEcCChhhH--HHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEE
Q 018529          170 GSSVAVFGL-GAVGLAAAEGARIAG-ASRIIGVDRSSKRF--EEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVE  245 (354)
Q Consensus       170 ~~~vlI~G~-g~~G~~a~~~a~~~g-~~~vi~v~~~~~~~--~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d  245 (354)
                      ..+|||+|+ |.+|...+..+...| . +|+++++++++.  +.+...++..+. .+-.+   .+.+.+... ++|+||.
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~-~V~~~~R~~~~~~~~~l~~~~~~~~~-~D~~d---~~~l~~~~~-~~d~vi~   78 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTF-KVRVVTRNPRKKAAKELRLQGAEVVQ-GDQDD---QVIMELALN-GAYATFI   78 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSS-EEEEEESCTTSHHHHHHHHTTCEEEE-CCTTC---HHHHHHHHT-TCSEEEE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCc-eEEEEEcCCCCHHHHHHHHCCCEEEE-ecCCC---HHHHHHHHh-cCCEEEE
Confidence            468999998 999999988888878 7 899998887654  233445654332 22122   123333332 5899999


Q ss_pred             cccC
Q 018529          246 CTGN  249 (354)
Q Consensus       246 ~~g~  249 (354)
                      +++.
T Consensus        79 ~a~~   82 (299)
T 2wm3_A           79 VTNY   82 (299)
T ss_dssp             CCCH
T ss_pred             eCCC
Confidence            9863

>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}

Probab=95.72  E-value=0.012  Score=46.25  Aligned_cols=97  Identities=12%  Similarity=0.121  Sum_probs=67.0

Q ss_pred             hhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCc-eEEcCCCCChhHHHHHHHHcCCCcc
Q 018529          163 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT-DFVNTSEHDRPIQEVIAEMTNGGVD  241 (354)
Q Consensus       163 ~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~-~v~~~~~~~~~~~~~i~~~~~~~~d  241 (354)
                      +...++++.+||-+|+|. |..+..+++.. . +|++++.+++..+.+++.... .++..+          ..+..+.+|
T Consensus        11 ~~~~~~~~~~vLDiG~G~-G~~~~~l~~~~-~-~v~~vD~s~~~~~~a~~~~~~v~~~~~d----------~~~~~~~~D   77 (170)
T 3i9f_A           11 PNIFEGKKGVIVDYGCGN-GFYCKYLLEFA-T-KLYCIDINVIALKEVKEKFDSVITLSDP----------KEIPDNSVD   77 (170)
T ss_dssp             HHHHSSCCEEEEEETCTT-CTTHHHHHTTE-E-EEEEECSCHHHHHHHHHHCTTSEEESSG----------GGSCTTCEE
T ss_pred             HhcCcCCCCeEEEECCCC-CHHHHHHHhhc-C-eEEEEeCCHHHHHHHHHhCCCcEEEeCC----------CCCCCCceE
Confidence            344578889999999874 77777777766 3 999999999999988775221 222111          112234799


Q ss_pred             EEEEcccC------hHhHHHHHHHhhCCCceEEEEcCC
Q 018529          242 RSVECTGN------IDNMISAFECVHDGWGVAVLVGVP  273 (354)
Q Consensus       242 vv~d~~g~------~~~~~~~~~~l~~~~g~~v~~g~~  273 (354)
                      +|+....-      ...++.+.+.|+++ |++++....
T Consensus        78 ~v~~~~~l~~~~~~~~~l~~~~~~L~pg-G~l~~~~~~  114 (170)
T 3i9f_A           78 FILFANSFHDMDDKQHVISEVKRILKDD-GRVIIIDWR  114 (170)
T ss_dssp             EEEEESCSTTCSCHHHHHHHHHHHEEEE-EEEEEEEEC
T ss_pred             EEEEccchhcccCHHHHHHHHHHhcCCC-CEEEEEEcC
Confidence            99865332      24678899999997 999887543

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=95.72  E-value=0.031  Score=45.22  Aligned_cols=62  Identities=27%  Similarity=0.411  Sum_probs=43.2

Q ss_pred             eEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEccc
Q 018529          172 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  248 (354)
Q Consensus       172 ~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g  248 (354)
                      ++||+|+ |.+|...++.+. .|+ +|++++++++          ....|..+. ..+.+.++++  +++|++++++|
T Consensus         5 ~vlVtGasg~iG~~~~~~l~-~g~-~V~~~~r~~~----------~~~~D~~~~-~~~~~~~~~~--~~~d~vi~~ag   67 (202)
T 3d7l_A            5 KILLIGASGTLGSAVKERLE-KKA-EVITAGRHSG----------DVTVDITNI-DSIKKMYEQV--GKVDAIVSATG   67 (202)
T ss_dssp             EEEEETTTSHHHHHHHHHHT-TTS-EEEEEESSSS----------SEECCTTCH-HHHHHHHHHH--CCEEEEEECCC
T ss_pred             EEEEEcCCcHHHHHHHHHHH-CCC-eEEEEecCcc----------ceeeecCCH-HHHHHHHHHh--CCCCEEEECCC
Confidence            6999987 999999888888 898 8999888764          122333332 1233344444  46899999987

>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*

Probab=95.72  E-value=0.033  Score=51.43  Aligned_cols=101  Identities=19%  Similarity=0.258  Sum_probs=66.5

Q ss_pred             hcCCCCCCeEEEEcCChhHHHHHHHHHHcC-CcEEEEEcCChhhHHHHHh----cCCceEEcCCCCChhHHHHHHHHcCC
Q 018529          164 VAKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTNG  238 (354)
Q Consensus       164 ~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g-~~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~~~~~  238 (354)
                      ...+++|++||=+|||+ |..++++|..++ ...|++++.++++.+.+++    +|.. +.. ...+  ..+ +.....+
T Consensus        96 ~L~~~~g~~VLDlgaGp-G~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~-v~~-~~~D--a~~-l~~~~~~  169 (464)
T 3m6w_A           96 LLDPKPGERVLDLAAAP-GGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAP-LAV-TQAP--PRA-LAEAFGT  169 (464)
T ss_dssp             HHCCCTTCEEEESSCTT-CHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCC-CEE-ECSC--HHH-HHHHHCS
T ss_pred             hcCcCCCCEEEEEcCCc-CHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCe-EEE-EECC--HHH-hhhhccc
Confidence            34678999998888764 666777777664 2389999999999887754    5765 322 2222  322 2222245


Q ss_pred             CccEEEE---cccC-------------------------hHhHHHHHHHhhCCCceEEEEc
Q 018529          239 GVDRSVE---CTGN-------------------------IDNMISAFECVHDGWGVAVLVG  271 (354)
Q Consensus       239 ~~dvv~d---~~g~-------------------------~~~~~~~~~~l~~~~g~~v~~g  271 (354)
                      .||+|+-   |.|.                         ...+..+++.|+++ |++++.-
T Consensus       170 ~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpG-G~LvysT  229 (464)
T 3m6w_A          170 YFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPG-GVLVYST  229 (464)
T ss_dssp             CEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEE-EEEEEEE
T ss_pred             cCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCC-cEEEEEe
Confidence            7999984   3221                         24667788899997 9988643

>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}

Probab=95.72  E-value=0.035  Score=49.54  Aligned_cols=88  Identities=20%  Similarity=0.242  Sum_probs=62.8

Q ss_pred             CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEccc
Q 018529          169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  248 (354)
Q Consensus       169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g  248 (354)
                      .|.+|.|+|.|.+|...++.++.+|. +|++.+++. +.+.+.+.|+..    .  +  +.+.++     ..|+|+.+++
T Consensus       175 ~gktvGIIGlG~IG~~vA~~l~~fG~-~V~~~d~~~-~~~~~~~~g~~~----~--~--l~ell~-----~aDvV~l~~P  239 (365)
T 4hy3_A          175 AGSEIGIVGFGDLGKALRRVLSGFRA-RIRVFDPWL-PRSMLEENGVEP----A--S--LEDVLT-----KSDFIFVVAA  239 (365)
T ss_dssp             SSSEEEEECCSHHHHHHHHHHTTSCC-EEEEECSSS-CHHHHHHTTCEE----C--C--HHHHHH-----SCSEEEECSC
T ss_pred             CCCEEEEecCCcccHHHHHhhhhCCC-EEEEECCCC-CHHHHhhcCeee----C--C--HHHHHh-----cCCEEEEcCc
Confidence            47899999999999999999999999 999998875 445555667642    1  1  433332     3688888765


Q ss_pred             ChH----hH-HHHHHHhhCCCceEEEEcC
Q 018529          249 NID----NM-ISAFECVHDGWGVAVLVGV  272 (354)
Q Consensus       249 ~~~----~~-~~~~~~l~~~~g~~v~~g~  272 (354)
                      ..+    .+ ...+..|+++ +.++.++.
T Consensus       240 lt~~T~~li~~~~l~~mk~g-ailIN~aR  267 (365)
T 4hy3_A          240 VTSENKRFLGAEAFSSMRRG-AAFILLSR  267 (365)
T ss_dssp             SSCC---CCCHHHHHTSCTT-CEEEECSC
T ss_pred             CCHHHHhhcCHHHHhcCCCC-cEEEECcC
Confidence            321    22 4567778886 88887774

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	354
d1d1ta2	176	c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (	7e-50
d1p0fa2	174	c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog	5e-45
d1e3ia2	174	c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (	1e-43
d2jhfa2	176	c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (	1e-41
d2fzwa2	176	c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (	9e-41
d1cdoa1	199	b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase	8e-36
d2fzwa1	197	b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase	1e-35
d1f8fa2	174	c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {	2e-34
d1cdoa2	175	c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Ga	3e-34
d1e3ia1	202	b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase	3e-33
d2jhfa1	198	b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase	2e-32
d1p0fa1	198	b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydro	6e-32
d1uufa1	179	b.35.1.2 (A:3-144,A:313-349) Hypothetical protein	4e-21
d1f8fa1	194	b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydr	6e-21
d1jqba2	174	c.2.1.1 (A:1140-1313) Bacterial secondary alcohol	3e-18
d1llua1	175	b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase	3e-18
d1jvba1	177	b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase	1e-17
d1vj0a1	184	b.35.1.2 (A:2-155,A:338-367) Hypothetical protein	1e-17
d1piwa1	192	b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehy	3e-16
d1e3ja1	178	b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sor	8e-16
d1h2ba1	171	b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenas	2e-15
d1rjwa1	171	b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase	6e-15
d1vj0a2	182	c.2.1.1 (A:156-337) Hypothetical protein TM0436 {T	1e-14
d1h2ba2	172	c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeo	1e-12
d1pl8a1	185	b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sor	2e-12
d1pl8a2	171	c.2.1.1 (A:146-316) Ketose reductase (sorbitol deh	2e-12
d1kola1	201	b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrog	9e-12
d1jqba1	177	b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secon	4e-11
d1uufa2	168	c.2.1.1 (A:145-312) Hypothetical protein YahK {Esc	9e-11
d1kola2	195	c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Ps	4e-10
d1iz0a1	131	b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase	3e-07
d1yb5a1	150	b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductas	3e-06
d1gu7a1	175	b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA redu	7e-06
d1o89a1	146	b.35.1.2 (A:1-115,A:293-323) Hypothetical protein	2e-05
d1qora1	147	b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductas	2e-04
d1tt7a1	162	b.35.1.2 (A:2-127,A:295-330) Hypothetical protein	4e-04

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score =  162 bits (411), Expect = 7e-50
 Identities = 71/175 (40%), Positives = 104/175 (59%)

Query: 142 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVD 201
           AP +KVC++ CG STG GA +   K + GS+  VFGLG VGL+   G + AGASRIIG+D
Sbjct: 2   APPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGID 61

Query: 202 RSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVH 261
            +  +FE+A   G T+ ++  +  +PI EV++EMT   V  + E  G+++ MI A    H
Sbjct: 62  LNKDKFEKAMAVGATECISPKDSTKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCH 121

Query: 262 DGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNK 316
             +G +V+VGVP    +    P+ +   RT KG  FG  K R D+P +V  ++ K
Sbjct: 122 MNYGTSVVVGVPPSAKMLTYDPMLLFTGRTWKGCVFGGLKSRDDVPKLVTEFLAK 176

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

 Score =  150 bits (379), Expect = 5e-45
 Identities = 79/175 (45%), Positives = 113/175 (64%), Gaps = 2/175 (1%)

Query: 142 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVD 201
           APL+  C++ CG +TG GA +N AK   GS+ AVFGLG VG +A  G + AGASRIIGV 
Sbjct: 1   APLES-CLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVG 59

Query: 202 RSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVH 261
               +F +A + G T+ +N  ++D+PI EVI E TNGGVD +VEC G I+ M++A +  +
Sbjct: 60  THKDKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTY 119

Query: 262 DGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNK 316
            G GV V++G+ S +      P+ +L  R+LKG+ FG +K   ++  +VD YM K
Sbjct: 120 CGSGVTVVLGLASPNERLPLDPLLLLTGRSLKGSVFGGFKGE-EVSRLVDDYMKK 173

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

 Score =  147 bits (370), Expect = 1e-43
 Identities = 77/175 (44%), Positives = 112/175 (64%), Gaps = 2/175 (1%)

Query: 142 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVD 201
           A L++VC++ CG S+G GA +N AK   GS+ AVFGLG VGL+A  G +IAGASRII +D
Sbjct: 1   ANLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAID 60

Query: 202 RSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVH 261
            + ++F +AK  G TD +N  E D+P+Q+VI E+T GGVD S++C G    + +A +C  
Sbjct: 61  INGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTV 120

Query: 262 DGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNK 316
            GWG   +VG    +       ++V+  R++ GTFFG +K    +P++V  Y NK
Sbjct: 121 LGWGSCTVVGAKVDEMTIP--TVDVILGRSINGTFFGGWKSVDSVPNLVSDYKNK 173

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

 Score =  141 bits (356), Expect = 1e-41
 Identities = 81/175 (46%), Positives = 117/175 (66%)

Query: 142 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVD 201
           +PL+KVC++ CG STG G+ + VAK  +GS+ AVFGLG VGL+   G + AGA+RIIGVD
Sbjct: 1   SPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVD 60

Query: 202 RSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVH 261
            +  +F +AK+ G T+ VN  ++ +PIQEV+ EM+NGGVD S E  G +D M++A  C  
Sbjct: 61  INKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQ 120

Query: 262 DGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNK 316
           + +GV+V+VGVP         P+ +L+ RT KG  FG +K +  +P +V  +M K
Sbjct: 121 EAYGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAK 175

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score =  139 bits (350), Expect = 9e-41
 Identities = 93/175 (53%), Positives = 119/175 (68%)

Query: 142 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVD 201
           APLDKVC+L CG+STG GA +N AK E GS  AVFGLG VGLA   G ++AGASRIIGVD
Sbjct: 1   APLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVD 60

Query: 202 RSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVH 261
            +  +F  AK+FG T+ +N  +  +PIQEV+ EMT+GGVD S EC GN+  M +A E  H
Sbjct: 61  INKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACH 120

Query: 262 DGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNK 316
            GWGV+V+VGV +      T+P  ++  RT KGT FG +K    +P +V  YM+K
Sbjct: 121 KGWGVSVVVGVAASGEEIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSK 175

>d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 199

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

 Score =  127 bits (319), Expect = 8e-36
 Identities = 78/199 (39%), Positives = 107/199 (53%), Gaps = 25/199 (12%)

Query: 3   STAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTP 62
           +T G ++ CKAAVAWEA KPL+I+++EV  P A E+RIKI  T +C TDLY         
Sbjct: 1   ATVGKVIKCKAAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKD 60

Query: 63  LFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHC---------------- 106
            FP + GHE AG+VESVG GV++ + G+ V+P+F  +CG+CR C                
Sbjct: 61  GFPVVLGHEGAGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANES 120

Query: 107 ---------RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTG 157
                    RF+  G  V  FLGTSTFS+YTVV+   VAKI+P   LD+       + + 
Sbjct: 121 PDVMSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSVKLDEFITHRMPLESV 180

Query: 158 LGATLNVAKPERGSSVAVF 176
             A   +   +   +V   
Sbjct: 181 NDAIDLMKHGKCIRTVLSL 199

>d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 197

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score =  126 bits (317), Expect = 1e-35
 Identities = 79/196 (40%), Positives = 108/196 (55%), Gaps = 25/196 (12%)

Query: 5   AGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLF 64
           A  ++ CKAAVAWEAGKPL I+++EVAPP+A EVRIKI  T++C TD Y          F
Sbjct: 1   ANEVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCF 60

Query: 65  PRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCR----------------- 107
           P I GH  AG+VESVGEGV+ L+ GD V+P++  +CG+C+ C                  
Sbjct: 61  PVILGHLGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG 120

Query: 108 --------FSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLG 159
                   F+  G+ + H++GTSTFSEYTVV    VAKI+PL  +D+    +        
Sbjct: 121 LMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLIKVDEFVTHNLSFDEINK 180

Query: 160 ATLNVAKPERGSSVAV 175
           A   +   +   +V  
Sbjct: 181 AFELMHSGKSIRTVVK 196

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

 Score =  122 bits (307), Expect = 2e-34
 Identities = 56/176 (31%), Positives = 88/176 (50%), Gaps = 4/176 (2%)

Query: 143 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDR 202
           P++ +  L CG+ TG GA +N  K    SS   +G GAVGL+A   A++ GAS II VD 
Sbjct: 2   PIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDI 61

Query: 203 SSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHD 262
              R E AK+ G T  +N+   D      I E+T+GGV+ ++E TG+ + +    +    
Sbjct: 62  VESRLELAKQLGATHVINSKTQD--PVAAIKEITDGGVNFALESTGSPEILKQGVDA-LG 118

Query: 263 GWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTFFGNYKPRTDLPSVVDMYMNKQ 317
             G   +VG P           ++L   +T+ G   G+  P+  +P +V +Y   +
Sbjct: 119 ILGKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVEGSGSPKKFIPELVRLYQQGK 174

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 175

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

 Score =  122 bits (306), Expect = 3e-34
 Identities = 95/175 (54%), Positives = 121/175 (69%), Gaps = 1/175 (0%)

Query: 142 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVD 201
           APLD VC+L CGVSTG GA +N AK E GS+ AVFGLGAVGLAA  G   AGA RII VD
Sbjct: 1   APLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVD 60

Query: 202 RSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVH 261
            +  +FE+AK FG TDFVN ++H  PI +V+++MTNGGVD S+EC GN+  M +A E   
Sbjct: 61  LNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCL 120

Query: 262 DGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNK 316
            GWGV+VLVG      V  T+PI ++  RT KG+ FG +K +  +P +V  Y++K
Sbjct: 121 KGWGVSVLVGWTDLHDVA-TRPIQLIAGRTWKGSMFGGFKGKDGVPKMVKAYLDK 174

>d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Length = 202

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

 Score =  120 bits (301), Expect = 3e-33
 Identities = 68/201 (33%), Positives = 108/201 (53%), Gaps = 33/201 (16%)

Query: 4   TAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL 63
           T G ++ CKAA+AW+ G PL I+++EV+PP+A EVRI++  T +C TD+   + K +  L
Sbjct: 2   TQGKVIKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPK-KKAL 60

Query: 64  FPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHC----------------- 106
           FP + GHE AG+VESVG GV++ + GD V+P F  +C  C+ C                 
Sbjct: 61  FPVVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYP 120

Query: 107 ------------RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGV 154
                       RF+  G  + HF+G S+FS+YTVV    +A+++    LD +   +   
Sbjct: 121 TIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARVDDEFDLDLLVTHALPF 180

Query: 155 STGLGATLNVAKPERGSSVAV 175
            + +   +++ K   G S+  
Sbjct: 181 ES-INDAIDLMKE--GKSIRT 198

>d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 198

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

 Score =  118 bits (295), Expect = 2e-32
 Identities = 83/202 (41%), Positives = 112/202 (55%), Gaps = 33/202 (16%)

Query: 3   STAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTP 62
           STAG ++ CKAAV WE  KP  I++VEVAPP+A EVRIK+  T +CR+D +       TP
Sbjct: 1   STAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTP 60

Query: 63  LFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCR--------------- 107
             P I GHEAAG+VES+GEGV+ +  GD V+P+FT +CG CR C+               
Sbjct: 61  -LPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMP 119

Query: 108 ----------FSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDK--VCILSCGVS 155
                     F+  G+P++HFLGTSTFS+YTVV    VAKI+    LD     +L     
Sbjct: 120 RGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAAFALDPLITHVLPFE-- 177

Query: 156 TGLGATLNVAKPERGSSVAVFG 177
             +    ++ +   G S+    
Sbjct: 178 -KINEGFDLLRS--GESIRTIL 196

>d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 198

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

 Score =  116 bits (292), Expect = 6e-32
 Identities = 70/205 (34%), Positives = 103/205 (50%), Gaps = 36/205 (17%)

Query: 4   TAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL 63
           TAG  +TCKAAVAWE  KPL ++ + VAPP+A EVRIKI  + +C +D    +    +  
Sbjct: 2   TAGKDITCKAAVAWEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIPSKF 61

Query: 64  FPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHC----------------- 106
              +  HEA GVVES+G GV+ ++ GD V+P+F  +CG CR C                 
Sbjct: 62  PVILG-HEAVGVVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKT 120

Query: 107 --------RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGL 158
                   RF+  G+P+ + +GTSTF+EYTVV    VAKI+P   ++ +           
Sbjct: 121 GLMADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKINVNFLVSTKLT----- 175

Query: 159 GATLNVAKPERGSSVAVFGLGAVGL 183
                + +  +   +   G G   +
Sbjct: 176 -----LDQINKAFELLSSGQGVRSI 195

>d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Length = 179

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

 Score = 87.3 bits (215), Expect = 4e-21
 Identities = 40/166 (24%), Positives = 64/166 (38%), Gaps = 14/166 (8%)

Query: 12  KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHE 71
           KA  A+ A +PL   D+    P   +V+I+I Y  +C +DL+   S+    ++P + GHE
Sbjct: 2   KAVGAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVPGHE 61

Query: 72  AAGVVESVGEGVSDLEVGDHVL------------PVFTGECGDCRHCRFSING-EPVNHF 118
             G V +VG+ V     GD V                 G    C H   + N   P    
Sbjct: 62  IVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPG 121

Query: 119 LGTSTFSEYTVVHSGCVAKINP-LAPLDKVCILSCGVSTGLGATLN 163
                +S+  VVH   V +I      + +   ++      L   + 
Sbjct: 122 HTLGGYSQQIVVHERYVLRIRVADIEMIRADQINEAYERMLRGDVK 167

>d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 194

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

 Score = 87.3 bits (215), Expect = 6e-21
 Identities = 48/218 (22%), Positives = 80/218 (36%), Gaps = 54/218 (24%)

Query: 10  TCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFG 69
              AAV    G    +Q +++  PQ  EV +K+  T +C TDL   + K   P  P + G
Sbjct: 3   DIIAAVTPCKGADFELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYPVP-LPAVLG 61

Query: 70  HEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCR---------------------- 107
           HE +G++E++G  V++L+VGDHV+ +  G CG C  C                       
Sbjct: 62  HEGSGIIEAIGPNVTELQVGDHVV-LSYGYCGKCTQCNTGNPAYCSEFFGRNFSGADSEG 120

Query: 108 ---FSINGE--PVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATL 162
                 + +    +HF   S+F+ Y +       K+    P D++               
Sbjct: 121 NHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKDFPFDQLVKFYAF--------- 171

Query: 163 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGV 200
                             +  AA +  +      II +
Sbjct: 172 ----------------DEINQAAIDSRKGITLKPIIKI 193

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

 Score = 79.2 bits (194), Expect = 3e-18
 Identities = 47/166 (28%), Positives = 76/166 (45%), Gaps = 6/166 (3%)

Query: 143 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDR 202
           PL+   +++  ++TG      +A  E GSSV V G+GAVGL    GA++ GA RIIGV  
Sbjct: 2   PLENAVMITDMMTTGFHG-AELADIEMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGS 60

Query: 203 SSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHD 262
                E AK +G TD +N  ++     +V+      GVDR +   G  + +  A + V  
Sbjct: 61  RPICVEAAKFYGATDILNY-KNGHIEDQVMKLTNGKGVDRVIMAGGGSETLSQAVKMVKP 119

Query: 263 GWGVAVLVGVPSKDAVFMTKPIN---VLNERTLKGTFFGNYKPRTD 305
           G G+   +         +   +     +  +T+KG      + R +
Sbjct: 120 G-GIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGLCPGGRLRAE 164

>d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Length = 175

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 79.2 bits (194), Expect = 3e-18
 Identities = 49/174 (28%), Positives = 74/174 (42%), Gaps = 12/174 (6%)

Query: 10  TCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIF 68
           T KAAV    G PL I++V+V  P   +V +KI+ + +C TDL+  E      P  P I 
Sbjct: 5   TMKAAVVHAYGAPLRIEEVKVPLPGPGQVLVKIEASGVCHTDLHAAEGDWPVKPPLPFIP 64

Query: 69  GHEAAGVVESVGEGVSDLEVGDHV-LPVFTGECGDCRHCRFSI----NGEPVNHFLGTST 123
           GHE  G V +VG GV+ ++ GD V +P     CG C HC          +    +     
Sbjct: 65  GHEGVGYVAAVGSGVTRVKEGDRVGIPWLYTACGCCEHCLTGWETLCESQQNTGYSVNGG 124

Query: 124 FSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK--PERGSSVAV 175
           ++EY +     V  +    P +    +  G    +   L+  +     G  V  
Sbjct: 125 YAEYVLADPNYVGIL----PKNVKATIHPGKLDDINQILDQMRAGQIEGRIVLE 174

>d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Length = 177

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

 Score = 77.7 bits (190), Expect = 1e-17
 Identities = 42/177 (23%), Positives = 74/177 (41%), Gaps = 15/177 (8%)

Query: 12  KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWE--------SKGQTPL 63
           +A    E GKPL +Q++ V  P+  +V IK++   +C +D++  +         +     
Sbjct: 2   RAVRLVEIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVK 61

Query: 64  FPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCR-FSINGEPVNHFLGTS 122
            P   GHE AG +E VG+ V     GD V        G+C +CR    +      +LG +
Sbjct: 62  LPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGIN 121

Query: 123 T---FSEYTVV-HSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAV 175
               ++EY +V H   + K+  + P+    +     +  +    N      G  V +
Sbjct: 122 FDGAYAEYVIVPHYKYMYKLRRVKPMITKTMKLEEANEAIDNLENFKA--IGRQVLI 176

>d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Length = 184

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

 Score = 78.0 bits (191), Expect = 1e-17
 Identities = 33/187 (17%), Positives = 64/187 (34%), Gaps = 26/187 (13%)

Query: 9   LTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIF 68
           L   A V  +  +PL+ ++ E++      + ++I    +C +D++ +  +      P I 
Sbjct: 3   LKAHAMVLEKFNQPLVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPRVPLPIIL 62

Query: 69  GHEAAGVVESVGEGVSDLEVGD-----HVLPVFTGECGDCRHCR-------------FSI 110
           GHE AG V  V     DL          ++      CG+C  C+             + I
Sbjct: 63  GHEGAGRVVEVNGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGI 122

Query: 111 NGEPVNHFLGTSTFSEYTVVHSG-CVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPER 169
           N     +      +S + V+     V K++          L           L + +   
Sbjct: 123 NRGCSEYPHLRGCYSSHIVLDPETDVLKVSEKITHRLP--LKEAN-----KALELMESRE 175

Query: 170 GSSVAVF 176
              V ++
Sbjct: 176 ALKVILY 182

>d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 192

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 74.1 bits (181), Expect = 3e-16
 Identities = 29/173 (16%), Positives = 59/173 (34%), Gaps = 14/173 (8%)

Query: 18  EAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVE 77
           E  K       +  P    ++ IKI+   +C +D++           P + GHE  G V 
Sbjct: 16  EDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGNMKMPLVVGHEIVGKVV 75

Query: 78  SVG-EGVSDLEVGDH-VLPVFTGECGDCRHCR-----------FSINGEPVNHFLGTSTF 124
            +G +  S L+VG    +      C +C  C+            + +    + ++    +
Sbjct: 76  KLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGY 135

Query: 125 SEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFG 177
           + Y  VH   V  I     ++ + +   GV       +         ++  + 
Sbjct: 136 ANYVRVHEHFVVPIPENIWVETLPVGEAGVHEAFER-MEKGDVRYRFTLVGYD 187

>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} Length = 178

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

 Score = 72.3 bits (176), Expect = 8e-16
 Identities = 34/173 (19%), Positives = 70/173 (40%), Gaps = 10/173 (5%)

Query: 13  AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWES---KGQTPLFPRIFG 69
           +AV ++    L ++   +  P+  EV +++ Y  +C +D++++E           P + G
Sbjct: 4   SAVLYKQND-LRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIG 62

Query: 70  HEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCR-----FSINGEPVNHFLGTSTF 124
           HEA+G V  VG+ V  L+ GD V       C  C+ C+        +             
Sbjct: 63  HEASGTVVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDDGNL 122

Query: 125 SEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFG 177
           + Y V  +    K+     + ++   S  +   + A    A+ +  +++ V  
Sbjct: 123 ARYYVHAADFCHKLPDNCNVKQLVTHSFKLEQTVDA-FEAARKKADNTIKVMI 174

>d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 171

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

 Score = 71.6 bits (174), Expect = 2e-15
 Identities = 38/172 (22%), Positives = 60/172 (34%), Gaps = 10/172 (5%)

Query: 12  KAAVAWEAGKPLIIQDVEV-APPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGH 70
           KAA   E  KPL I+DV+        +V ++I    +C TDL+  +      L P++   
Sbjct: 1   KAARLHEYNKPLRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYT 60

Query: 71  EAAGVVESV---GEGVSDLEVGDHVLPVFTGECGDCR-HCRFSINGEPVNHFLGTST--- 123
                V  +    EGV  LE GD V+       G C               F G +    
Sbjct: 61  LGHENVGYIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGLNIDGG 120

Query: 124 FSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAV 175
           F+E+       V K+     ++        ++  L           G +V +
Sbjct: 121 FAEFMRTSHRSVIKLPKDVRVEVDIHKLDEINDVLERLEKGEVL--GRAVLI 170

>d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Length = 171

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 70.0 bits (170), Expect = 6e-15
 Identities = 49/174 (28%), Positives = 73/174 (41%), Gaps = 14/174 (8%)

Query: 12  KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWE-SKGQTPLFPRIFGH 70
           KAAV  +  +PL I++VE       EV ++IK   +C TDL+         P  P I GH
Sbjct: 2   KAAVVEQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGH 61

Query: 71  EAAGVVESVGEGVSDLEVGDHV-LPVFTGECGDCRHCRF----SINGEPVNHFLGTSTFS 125
           E  G+VE VG GV+ L+VGD V +P     CG C +C          +    +     ++
Sbjct: 62  EGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVDGGYA 121

Query: 126 EYTVVHSGCVAKINPLAPLDKVCI--LSCGVSTGLGATLNVAKPERGSSVAVFG 177
           EY    +  V KI     ++   +  ++      L   +N      G  V    
Sbjct: 122 EYCRAAADYVVKIPDNTIIEVQPLEKINEVFDRMLKGQIN------GRVVLTLE 169

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Length = 182

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

 Score = 69.6 bits (169), Expect = 1e-14
 Identities = 39/173 (22%), Positives = 66/173 (38%), Gaps = 8/173 (4%)

Query: 144 LDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS 203
           LD + +  C  +T   A     +   G +V + G G +GL     AR  GA  +I +  S
Sbjct: 3   LDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGS 62

Query: 204 SKRFEEAKKFGVTDFVNTSEH--DRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVH 261
             R + A++ G    +N  E   +   + ++      G D  +E TG+   ++   E + 
Sbjct: 63  PNRLKLAEEIGADLTLNRRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLR 122

Query: 262 DGWGVAVLVGVPSKDAVFMTKPIN--VLNERTLKGTFFGNYKPRTDLPSVVDM 312
            G G   + GV         K     VL   T KG +  +    +     V +
Sbjct: 123 RG-GFYSVAGVAVPQDPVPFKVYEWLVLKNATFKGIWVSD---TSHFVKTVSI 171

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 172

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

 Score = 63.4 bits (153), Expect = 1e-12
 Identities = 32/166 (19%), Positives = 73/166 (43%), Gaps = 9/166 (5%)

Query: 150 LSCGVSTGLGATLNVAKPER-GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFE 208
           L+    T   A    A+    G+ VA+ G+G +G  A +  ++   + +I +D   ++ +
Sbjct: 12  LADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLK 71

Query: 209 EAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAV 268
            A++ G    V+      P+++V+      GV+ +++  G+   +      +    G  +
Sbjct: 72  LAERLGADHVVDARRD--PVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLGRM-GRLI 128

Query: 269 LVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYM 314
           +VG   +      + I   +E + +G+  GNY    +L  +V + +
Sbjct: 129 IVGYGGELRFPTIRVI--SSEVSFEGSLVGNYV---ELHELVTLAL 169

>d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Length = 185

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.0 bits (152), Expect = 2e-12
 Identities = 33/177 (18%), Positives = 61/177 (34%), Gaps = 12/177 (6%)

Query: 14  AVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL---FPRIFGH 70
           ++       L +++  +  P   EV +++    +C +D+++WE           P + GH
Sbjct: 10  SLVVHGPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGH 69

Query: 71  EAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCR-FSINGEPVNHFLGTS----TFS 125
           EA+G VE VG  V  L+ GD V         +   C+    N  P   F  T        
Sbjct: 70  EASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGNLC 129

Query: 126 EYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVG 182
            +   ++    K+     +  +      +   L A     K   G  + +       
Sbjct: 130 RFYKHNAAFCYKLPDN--VKPLVTHRFPLEKALEA-FETFKKGLGLKIML-KCDPSD 182

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Length = 171

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.6 bits (151), Expect = 2e-12
 Identities = 39/170 (22%), Positives = 66/170 (38%), Gaps = 12/170 (7%)

Query: 150 LSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEE 209
           LS G+               G  V V G G +G+     A+  GA++++  D S+ R  +
Sbjct: 12  LSVGI-----HACRRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSK 66

Query: 210 AKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAV 268
           AK+ G    +  S+          E   G   + ++ECTG   ++ +       G G  V
Sbjct: 67  AKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSG-GTLV 125

Query: 269 LVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQL 318
           LVG+ S+           + E  +KG F    +     P  + M  +K +
Sbjct: 126 LVGLGSEMTTVPLLHA-AIREVDIKGVF----RYCNTWPVAISMLASKSV 170

>d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 201

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

 Score = 61.4 bits (148), Expect = 9e-12
 Identities = 27/207 (13%), Positives = 59/207 (28%), Gaps = 32/207 (15%)

Query: 12  KAAVAWEAGKPLIIQDVEV-------APPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLF 64
           +  V   +GK + +Q ++               V +K+  T++C +D +    +G+T   
Sbjct: 3   RGVVYLGSGK-VEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMV--RGRTTAQ 59

Query: 65  PRIFGHEAAGVVESVGEGVSDLEVGDHVLPVF----TGECGDCRHCRFSINGEPVNHFLG 120
             +                 +      ++ V      G C  C+     +         G
Sbjct: 60  VGLVLGHEITGEVIEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAG 119

Query: 121 T-----------STFSEYTVVHS--GCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKP 167
                          +EY +V      + K+       +   ++  V   + + L+ A  
Sbjct: 120 GAYGYVDMGDWTGGQAEYVLVPYADFNLLKLPDRDKAMEKINIAEVVGVQVIS-LDDAPR 178

Query: 168 ERGSSVAVFGLGAVGLAAAEGARIAGA 194
             G     F  G       +  +   A
Sbjct: 179 GYG----EFDAGVPKKFVIDPHKTFSA 201

>d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Length = 177

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

 Score = 59.2 bits (142), Expect = 4e-11
 Identities = 35/182 (19%), Positives = 55/182 (30%), Gaps = 17/182 (9%)

Query: 12  KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHE 71
           K        K L   + E     + +  ++    S C +D++             I GHE
Sbjct: 2   KGFAMLGINK-LGWIEKERPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGDRKNMILGHE 60

Query: 72  AAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCR-------FSINGEPVNHFLGTSTF 124
           A G V  VG  V D + GD V+   T         +         +             F
Sbjct: 61  AVGEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNFKDGVF 120

Query: 125 SEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLA 184
            EY  V+   +     LA L K   LS  V+       ++       ++ +       L 
Sbjct: 121 GEYFHVNDADMN----LAILPKDVDLSKLVTHVYHGFDHI-----EEALLLMKDKPKDLI 171

Query: 185 AA 186
            A
Sbjct: 172 KA 173

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Length = 168

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

 Score = 57.7 bits (138), Expect = 9e-11
 Identities = 35/173 (20%), Positives = 53/173 (30%), Gaps = 12/173 (6%)

Query: 140 PLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIG 199
           P   L  V  L C   T     L   +   G  V V G+G +G    + A   GA  +  
Sbjct: 2   PQEQLAAVAPLLCAGITTYSP-LRHWQAGPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAF 60

Query: 200 VDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFEC 259
               +KR E AK  G  + VN                    D  +       N+      
Sbjct: 61  TTSEAKR-EAAKALGADEVVN------SRNADEMAAHLKSFDFILNTVAAPHNLDDFTTL 113

Query: 260 VHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDM 312
           +    G   LVG P+           ++  R + G+  G      +   ++D 
Sbjct: 114 LKRD-GTMTLVGAPATPHKSPEVFNLIMKRRAIAGSMIGG---IPETQEMLDF 162

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 195

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

 Score = 56.4 bits (135), Expect = 4e-10
 Identities = 37/150 (24%), Positives = 56/150 (37%), Gaps = 20/150 (13%)

Query: 144 LDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS 203
           +  +  LS  + TG       A    GS+V V G G VGLAAA  AR+ GA+ +I  D +
Sbjct: 1   IRDLTCLSDILPTGYHG-AVTAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLN 59

Query: 204 SKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTG-------------- 248
             R   AK  G      + +    + E IA +     VD +V+  G              
Sbjct: 60  PARLAHAKAQGFEIADLSLDTP--LHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHE 117

Query: 249 -NIDNMISAFECVHDGWGVAVLVGVPSKDA 277
                + S  +      G   + G+   + 
Sbjct: 118 APATVLNSLMQVTRVA-GKIGIPGLYVTED 146

>d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} Length = 131

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

 Score = 46.7 bits (110), Expect = 3e-07
 Identities = 21/156 (13%), Positives = 35/156 (22%), Gaps = 33/156 (21%)

Query: 12  KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHE 71
           KA V    G PL + D+     +  EV ++++   L   D         T L P      
Sbjct: 2   KAWVLKRLGGPLELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHPP----- 56

Query: 72  AAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVH 131
                                                 + G      +     +E   V 
Sbjct: 57  ----------------------------FIPGMEVVGVVEGRRYAALVPQGGLAERVAVP 88

Query: 132 SGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKP 167
            G +  +    P+               A L+    
Sbjct: 89  KGALLPLPEGRPVVGPVFPFAEAEAAFRALLDRGHT 124

>d1yb5a1 b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} Length = 150

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.3 bits (103), Expect = 3e-06
 Identities = 32/178 (17%), Positives = 52/178 (29%), Gaps = 38/178 (21%)

Query: 12  KAAVAWEAGKPL---IIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIF 68
           +A   +E G P    +  D+ V  P+  +V IK+    +   + Y               
Sbjct: 4   RAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYT 63

Query: 69  -GHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEY 127
            G + AGV+E+VG+  S  + GD V    T   G   +                      
Sbjct: 64  PGSDVAGVIEAVGDNASAFKKGDRVFTSSTISGGYAEYALA------------------- 104

Query: 128 TVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAA 185
                              V  L   +   +G+   + K        + G GA G   
Sbjct: 105 ---------------ADHTVYKLPEKLKPVIGSQYPLEKVAEAHENIIHGSGATGKMI 147

>d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 175

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

 Score = 44.0 bits (102), Expect = 7e-06
 Identities = 19/185 (10%), Positives = 49/185 (26%), Gaps = 20/185 (10%)

Query: 8   ILTCKAAVAWEAGKP-----LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTP 62
           ++T +A +  + G+P         +++       EV +K   + +  +D+          
Sbjct: 1   MITAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQI------- 53

Query: 63  LFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTS 122
                 G   +   ++ G G ++         +F                  +   +   
Sbjct: 54  -----QGVYPSKPAKTTGFGTTEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFG 108

Query: 123 TFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFG--LGA 180
           T+  + + +     K  P     K      G++            +    +   G     
Sbjct: 109 TWRTHALGNDDDFIK-LPNPAQSKANGKPNGLTDAKSIETLYDGTKPLHELYQDGVANSK 167

Query: 181 VGLAA 185
            G   
Sbjct: 168 DGKQL 172

>d1o89a1 b.35.1.2 (A:1-115,A:293-323) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} Length = 146

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

 Score = 41.8 bits (97), Expect = 2e-05
 Identities = 19/167 (11%), Positives = 44/167 (26%), Gaps = 25/167 (14%)

Query: 12  KAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPR-IF 68
           +A +  +        +Q ++ +     +V + + ++SL   D      KG+       I 
Sbjct: 2   QALLLEQQDGKTLASVQTLDESRLPEGDVTVDVHWSSLNYKDALAITGKGKIIRNFPMIP 61

Query: 69  GHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYT 128
           G + AG V             D                  +  G            +E  
Sbjct: 62  GIDFAGTVR---------TSEDPRFHAGQEVLLTGWGVGENHWG----------GLAEQA 102

Query: 129 VVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAV 175
            V    +  +       ++ +            +   + +  + V V
Sbjct: 103 RVKGDWLVAMPQGQAAKEISLSEA---PNFAEAIINNQIQGRTLVKV 146

>d1qora1 b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} Length = 147

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

 Score = 39.2 bits (90), Expect = 2e-04
 Identities = 26/161 (16%), Positives = 46/161 (28%), Gaps = 25/161 (15%)

Query: 18  EAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGV 75
           + G P  L   +   A P   E++++ K   +   D Y        P  P   G EAAG+
Sbjct: 8   KHGGPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPPPSLPSGLGTEAAGI 67

Query: 76  VESVGEGVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCV 135
           V  V                                   V        +S    + +   
Sbjct: 68  VSKV----------------------GSGVKHIKAGDRVVYAQSALGAYSSVHNIIADKA 105

Query: 136 AKINPLAPLDKVCILSCGVSTGLGA-TLNVAKPERGSSVAV 175
           A +     +D        +     A  +  ++  +GSS+ +
Sbjct: 106 AILPAAIKVDVAEQQKYPLKDAQRAHEILESRATQGSSLLI 146

>d1tt7a1 b.35.1.2 (A:2-127,A:295-330) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} Length = 162

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

 Score = 38.3 bits (88), Expect = 4e-04
 Identities = 18/173 (10%), Positives = 39/173 (22%), Gaps = 23/173 (13%)

Query: 12  KAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFG 69
           +A  A +      + ++ +         V IK+ Y+ +   D    ++ G       +  
Sbjct: 5   QALQAEKNADDVSVHVKTISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGNIVREYPLIL 64

Query: 70  HEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTV 129
                               D    V +            I              SEY  
Sbjct: 65  GI------------------DAAGTVVSSNDPRFAEGDEVIATSYELGVSRDGGLSEYAS 106

Query: 130 VHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVG 182
           V    +  +     L +  +        +       +   G+   +      G
Sbjct: 107 VPGDWLVPLPQNLSLKEAMVDQL---LTIVDREVSLEETPGALKDILQNRIQG 156

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	354
d1cdoa1	199	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	100.0
d2fzwa1	197	Alcohol dehydrogenase {Human (Homo sapiens), diffe	100.0
d1e3ja1	178	Ketose reductase (sorbitol dehydrogenase) {Silverl	100.0
d1llua1	175	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	100.0
d1e3ia1	202	Alcohol dehydrogenase {Mouse (Mus musculus), class	100.0
d1vj0a1	184	Hypothetical protein TM0436 {Thermotoga maritima [	100.0
d1f8fa1	194	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	100.0
d1h2ba1	171	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	100.0
d1piwa1	192	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	100.0
d1pl8a1	185	Ketose reductase (sorbitol dehydrogenase) {Human (	100.0
d1jqba1	177	Bacterial secondary alcohol dehydrogenase {Clostri	100.0
d1p0fa1	198	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	100.0
d1kola1	201	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	100.0
d2jhfa1	198	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	100.0
d1jvba1	177	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	99.98
d1rjwa1	171	Alcohol dehydrogenase {Bacillus stearothermophilus	99.98
d1yb5a1	150	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	99.97
d1uufa1	179	Hypothetical protein YahK {Escherichia coli [TaxId	99.97
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	99.97
d1qora1	147	Quinone oxidoreductase {Escherichia coli [TaxId: 5	99.97
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	99.96
d1iz0a1	131	Quinone oxidoreductase {Thermus thermophilus [TaxI	99.96
d1xa0a1	152	B. subtilis YhfP homologue {Bacillus stearothermop	99.96
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	99.96
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.96
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	99.95
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	99.95
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.95
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	99.95
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	99.95
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	99.95
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	99.94
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	99.94
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	99.94
d1o89a1	146	Hypothetical protein YhdH {Escherichia coli [TaxId	99.94
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	99.94
d1tt7a1	162	Hypothetical protein YhfP {Bacillus subtilis [TaxI	99.94
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	99.94
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	99.94
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	99.94
d1gu7a1	175	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	99.94
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	99.93
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	99.93
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	99.93
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	99.93
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	99.92
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	99.91
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	99.91
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	99.9
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	99.89
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	99.86
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	99.84
d1vj1a1	166	Putative zinc-binding alcohol dehydrogenase {Mouse	99.72
d1v3va1	147	Leukotriene b4 12-hydroxydehydrogenase/prostagland	99.71
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	99.56
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	98.23
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	98.05
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	98.02
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	97.97
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	97.95
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	97.85
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.75
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	97.75
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	97.75
d1yb2a1	250	Hypothetical protein Ta0852 {Thermoplasma acidophi	97.72
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	97.7
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	97.56
d1o54a_	266	Hypothetical protein TM0748 {Thermotoga maritima [	97.53
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	97.52
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	97.51
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	97.49
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	97.47
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	97.46
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	97.45
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	97.44
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	97.44
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.43
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	97.43
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	97.43
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	97.42
d1kpia_	291	CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}	97.42
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	97.4
d1nkva_	245	Hypothetical Protein YjhP {Escherichia coli [TaxId	97.4
d1kpga_	285	CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}	97.39
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	97.39
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	97.39
d2fk8a1	280	Methoxy mycolic acid synthase 4, Mma4 {Mycobacteri	97.34
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	97.32
d1r18a_	223	Protein-L-isoaspartyl O-methyltransferase {Fruit f	97.27
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	97.25
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	97.24
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	97.23
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	97.23
d1i9ga_	264	Probable methyltransferase Rv2118c {Mycobacterium	97.22
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	97.22
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	97.21
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	97.2
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	97.19
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	97.17
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	97.14
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	97.14
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	97.14
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	97.14
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	97.14
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	97.13
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	97.13
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	97.1
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	97.1
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	97.09
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	97.07
d1xxla_	234	Hypothetical protein YcgJ {Bacillus subtilis [TaxI	97.07
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	97.07
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	97.05
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	97.04
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	97.01
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	97.0
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	96.99
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	96.96
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	96.95
d2b25a1	324	Hypothetical protein FLJ20628 {Human (Homo sapiens	96.94
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	96.94
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	96.91
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	96.88
d2avna1	246	Hypothetical methyltransferase TM1389 {Thermotoga	96.86
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	96.85
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	96.85
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	96.85
d1zx0a1	229	Guanidinoacetate methyltransferase {Human (Homo sa	96.84
d1g8aa_	227	Fibrillarin homologue {Archaeon Pyrococcus horikos	96.84
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	96.84
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	96.84
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	96.82
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	96.82
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	96.8
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	96.77
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	96.77
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	96.75
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	96.75
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	96.75
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	96.75
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	96.74
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	96.73
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	96.7
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	96.67
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	96.64
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	96.63
d2o57a1	282	Putative sarcosine dimethylglycine methyltransfera	96.62
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	96.55
d1g8sa_	230	Fibrillarin homologue {Archaeon Methanococcus jann	96.5
d1nw3a_	328	Catalytic, N-terminal domain of histone methyltran	96.47
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	96.47
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	96.44
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	96.41
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	96.38
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	96.37
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	96.31
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	96.26
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	96.22
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	96.19
d1u2za_	406	Catalytic, N-terminal domain of histone methyltran	96.16
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	96.14
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	96.14
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	96.13
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	96.1
d1xj5a_	290	Spermidine synthase {Thale cress (Arabidopsis thal	96.08
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	96.02
d1susa1	227	Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicag	95.96
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	95.96
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	95.91
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	95.88
d2frna1	260	Hypothetical protein PH0793 {Pyrococcus horikoshii	95.75
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	95.73
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	95.62
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	95.58
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	95.56
d1im8a_	225	Hypothetical protein HI0319 (YecO) {Haemophilus in	95.54
d2b2ca1	312	Spermidine synthase {Caenorhabditis elegans [TaxId	95.52
d1zh8a1	181	Hypothetical protein TM0312 {Thermotoga maritima [	95.5
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	95.49
d1xvaa_	292	Glycine N-methyltransferase {Rat (Rattus norvegicu	95.49
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	95.43
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	95.42
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	95.4
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	95.38
d1dusa_	194	Hypothetical protein MJ0882 {Archaeon Methanococcu	95.34
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	95.34
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	95.32
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	95.27
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	95.27
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	95.21
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	95.18
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	95.18
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	95.11
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	95.04
d2o07a1	285	Spermidine synthase {Human (Homo sapiens) [TaxId:	95.02
d2fcaa1	204	tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacil	95.01
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	94.94
d1p91a_	268	rRNA methyltransferase RlmA {Escherichia coli [Tax	94.94
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	94.93
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	94.86
d1cf2o1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	94.86
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	94.83
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	94.8
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	94.79
d1xeaa1	167	Putative oxidoreductase VCA1048 {Vibrio cholerae [	94.74
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	94.72
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	94.72
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	94.71
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	94.7
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	94.7
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	94.66
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	94.62
d2avda1	219	COMT domain-containing protein 1, COMTD1 {Human (H	94.62
d1jbqa_	355	Cystathionine beta-synthase {Human (Homo sapiens)	94.6
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	94.6
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	94.58
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	94.56
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	94.54
d1uira_	312	Spermidine synthase {Thermus thermophilus [TaxId:	94.45
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	94.44
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	94.44
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	94.44
d1iy9a_	274	Spermidine synthase {Bacillus subtilis [TaxId: 142	94.4
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	94.34
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	94.34
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	94.3
d1inla_	295	Spermidine synthase {Thermotoga maritima [TaxId: 2	94.29
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	94.27
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	94.24
d1obfo1	173	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	94.21
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	94.17
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	94.16
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	94.13
d1g6q1_	328	Arginine methyltransferase, HMT1 {Baker's yeast (S	94.12
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	94.1
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	94.09
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	94.08
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	94.05
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	94.04
d2g82a1	168	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	94.0
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	93.99
d2bhsa1	292	O-acetylserine sulfhydrylase (Cysteine synthase) {	93.96
d1ri5a_	252	mRNA cap (Guanine N-7) methyltransferase {Fungus (	93.95
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	93.94
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	93.83
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	93.82
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	93.82
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	93.81
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	93.8
d1mjfa_	276	Putative spermidine synthetase PF0127 (SpeE) {Arch	93.72
d1ws6a1	171	Methyltransferase TTHA0928 {Thermus thermophilus [	93.66
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	93.6
d1dssg1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	93.58
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	93.57
d1u8fo1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	93.54
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	93.52
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	93.49
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	93.49
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	93.47
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	93.44
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	93.44
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	93.44
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	93.38
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	93.32
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	93.29
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	93.28
d1xtpa_	254	Hypothetical protein Lmaj004091aaa (LmjF30.0810) {	93.21
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	93.18
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	93.07
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	93.07
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	92.92
d1h6da1	221	Glucose-fructose oxidoreductase, N-terminal domain	92.83
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	92.8
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	92.77
d1hdgo1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	92.75
d2ex4a1	222	Adrenal gland protein AD-003 (C9orf32) {Human (Hom	92.74
d2gh1a1	281	Methyltransferase BC2162 {Bacillus cereus [TaxId:	92.74
d1tlta1	164	Virulence factor MviM {Escherichia coli [TaxId: 56	92.71
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	92.65
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	92.65
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	92.63
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	92.59
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	92.52
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	92.48
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	92.45
d1y7la1	310	O-acetylserine sulfhydrylase (Cysteine synthase) {	92.44
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	92.4
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	92.36
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	92.35
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	92.33
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	92.3
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	92.28
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	92.18
d1gado1	166	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	92.07
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	92.05
d2dula1	375	N(2),N(2)-dimethylguanosine tRNA methyltransferase	92.04
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	91.97
d1wg8a2	182	TM0872, methyltransferase domain {Thermus thermoph	91.89
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	91.84
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	91.77
d3cmco1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	91.59
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	91.57
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	91.56
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	91.53
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	91.5
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	91.47
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	91.46
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	91.39
d1trba1	190	Thioredoxin reductase {Escherichia coli [TaxId: 56	91.39
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	91.32
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	91.29
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	91.26
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	91.26
d1jqea_	280	Histamine methyltransferase {Human (Homo sapiens)	91.25
d1tw3a2	253	Carminomycin 4-O-methyltransferase {Streptomyces p	91.22
d1lqta2	239	Ferredoxin:NADP reductase FprA {Mycobacterium tube	91.21
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	91.11
d1fl2a1	184	Alkyl hydroperoxide reductase subunit F (AhpF), C-	91.05
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	91.0
d1dxla1	221	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	90.97
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	90.96
d2p7ia1	225	Hypothetical protein ECA1738 {Erwinia carotovora [	90.94
d2esra1	152	Putative methyltransferase SPy1538 {Streptococcus	90.83
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	90.77
d1z7wa1	320	O-acetylserine sulfhydrylase (Cysteine synthase) {	90.56
d1sqga2	284	Ribosomal RNA small subunit methyltransferase B, R	90.55
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	90.45
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	90.45
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	90.31
d2b4ro1	166	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	90.27
d1wy7a1	201	Hypothetical protein PH1948 {Archaeon Pyrococcus h	90.21
d1gesa1	217	Glutathione reductase {Escherichia coli [TaxId: 56	90.17
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	90.12
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	90.1
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	90.0
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	89.99
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	89.97
d1fcja_	302	O-acetylserine sulfhydrylase (Cysteine synthase) {	89.88
d2cl5a1	214	Catechol O-methyltransferase, COMT {Rat (Rattus no	89.76
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	89.75
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	89.68
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	89.64
d1ebda1	223	Dihydrolipoamide dehydrogenase {Bacillus stearothe	89.64
d1lvla1	220	Dihydrolipoamide dehydrogenase {Pseudomonas putida	89.62
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	89.35
d1ojta1	229	Dihydrolipoamide dehydrogenase {Neisseria meningit	89.28
d1v59a1	233	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	89.09
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	89.07
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	89.03
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	88.99
d1vdca1	192	Thioredoxin reductase {Mouse-ear cress (Arabidopsi	88.58
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	88.55
d1ixka_	313	Hypothetical methyltransferase PH1374 {Archaeon Py	88.5
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	88.49
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	88.38
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	88.29
d3lada1	229	Dihydrolipoamide dehydrogenase {Azotobacter vinela	88.26
d3grsa1	221	Glutathione reductase {Human (Homo sapiens) [TaxId	88.18
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	88.12
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	88.11
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	88.05
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	87.97
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	87.92
d1yzha1	204	tRNA (guanine-N(7)-)-methyltransferase TrmB {Strep	87.91
d1tdja1	331	Threonine deaminase {Escherichia coli [TaxId: 562]	87.83
d2nvwa1	237	Galactose/lactose metabolism regulatory protein GA	87.81
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	87.8
d1pn0a1	360	Phenol hydroxylase {Soil-living yeast (Trichosporo	87.56
d1wkva1	382	O-acetylserine sulfhydrylase (Cysteine synthase) {	87.48
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	87.38
d1y0pa2	308	Flavocytochrome c3 (respiratory fumarate reductase	87.26
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	87.23
d1vlma_	208	Possible histamine N-methyltransferase TM1293 {The	87.1
d2fhpa1	182	Putative methylase EF2452 {Enterococcus faecalis [	87.04
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	86.93
d1h6va1	235	Mammalian thioredoxin reductase {Rat (Rattus norve	86.89
d1rm4a1	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	86.82
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	86.57
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	86.43
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	86.43
d2igta1	309	Putative methyltransferase Atu0340 {Agrobacterium	86.2
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	86.03
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	85.94
d1omoa_	320	Archaeal alanine dehydrogenase {Archaeon Archaeogl	85.84
d1o58a_	293	O-acetylserine sulfhydrylase (Cysteine synthase) {	85.54
d1cjca2	230	Adrenodoxin reductase of mitochondrial p450 system	85.48
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	85.32
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	85.23
d1qo8a2	317	Flavocytochrome c3 (respiratory fumarate reductase	85.23
d2blna2	203	Polymyxin resistance protein ArnA, N-terminal doma	84.82
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	84.73
d1onfa1	259	Glutathione reductase {Plasmodium falciparum [TaxI	84.48
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	84.33
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	84.13
d1rp0a1	278	Thiazole biosynthetic enzyme Thi4 {Thale cress(Ara	84.03
d1d4ca2	322	Flavocytochrome c3 (respiratory fumarate reductase	83.97
d2bs2a2	336	Fumarate reductase {Wolinella succinogenes [TaxId:	83.96
d2gmha1	380	Electron transfer flavoprotein-ubiquinone oxidored	83.77
d1ve5a1	310	Threonine deaminase {Thermus thermophilus [TaxId:	83.73
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	83.71
d2cula1	230	GidA-related protein TTHA1897 {Thermus thermophilu	83.59
d1qzza2	256	Aclacinomycin-10-hydroxylase RdmB {Streptomyces pu	83.43
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	83.27
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	83.23
d2g72a1	263	Phenylethanolamine N-methyltransferase, PNMTase {H	83.19
d1np3a2	182	Class I ketol-acid reductoisomerase (KARI) {Pseudo	82.75
d2b3ta1	274	N5-glutamine methyltransferase, HemK {Escherichia	82.62
d1ebfa1	168	Homoserine dehydrogenase {Baker's yeast (Saccharom	82.55
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	82.4
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	82.24
d2a14a1	257	Indolethylamine N-methyltransferase, INMT {Human (	82.06
d1xdza_	239	Glucose-inhibited division protein B (GidB) {Bacil	81.74
d1mo9a1	261	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	81.56
d1vl6a1	222	Malate oxidoreductase (malic enzyme) {Thermotoga m	81.41
d1jsxa_	207	Glucose-inhibited division protein B (GidB) {Esche	81.3
d2ifta1	183	Putative methylase HI0767 {Haemophilus influenzae	80.37
d1v71a1	318	Hypothetical protein C320.14 (SPCC320.14, SPCC330.	80.36
d1up7a1	162	6-phospho-beta-glucosidase {Thermotoga maritima [T	80.09
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	80.03

>d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=100.00  E-value=1.7e-37  Score=256.09  Aligned_cols=171  Identities=43%  Similarity=0.722  Sum_probs=154.6

Q ss_pred             ccchhcceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCC
Q 018529            6 GLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSD   85 (354)
Q Consensus         6 ~~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~   85 (354)
                      ..+||+||++++++++|+++++++.|+|++|||||||.++|||++|++.+.+......+|.++|||++|+|+++|+++++
T Consensus         4 ~~~~~~kAav~~~~~~pl~i~ev~~P~p~~~eVlIkv~a~giCgsD~~~~~g~~~~~~~p~i~GhE~~G~v~~vG~~v~~   83 (199)
T d1cdoa1           4 GKVIKCKAAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKDGFPVVLGHEGAGIVESVGPGVTE   83 (199)
T ss_dssp             TSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTTCCTTSCSEECCCCEEEEEEEECTTCCS
T ss_pred             CCceEEEEEEEecCCCCcEEEEEECCCCCCCEEEEEEEEEEEecchhhhhhhcccccccccccccccceEEEEEcCCCce
Confidence            46788999999999999999999999999999999999999999999999987776788999999999999999999999


Q ss_pred             CCCCCEEEecccCCCCCCcccccCCCCCC-------------------------cccccccccceeeEEeeccceEECCC
Q 018529           86 LEVGDHVLPVFTGECGDCRHCRFSINGEP-------------------------VNHFLGTSTFSEYTVVHSGCVAKINP  140 (354)
Q Consensus        86 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~-------------------------~~~~~~~g~~a~~~~v~~~~~~~~P~  140 (354)
                      |++||||++.+..+|++|.+|+.+....+                         .++..+.|+||||++++++.++++|+
T Consensus        84 ~~~GdrV~~~~~~~cg~c~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~Ggfaey~~v~~~~~~~iP~  163 (199)
T d1cdoa1          84 FQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDP  163 (199)
T ss_dssp             CCTTCEEEECSSCCCSSSHHHHCTTCCCCSCSGGGTCTTTTSCSCCCEEETTEEEEEGGGTCCSBSEEEEEGGGEEECCT
T ss_pred             ecCCCEEEEeeeccccccccccCCCcccccccccccccccccCcccceeeccceeecccccCCceEEEEEchHHEEECCC
Confidence            99999999999999999999976543211                         12223459999999999999999999


Q ss_pred             CCCccchhhcccchhhhhhhhhhhcCCCCCCeEEEE
Q 018529          141 LAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVF  176 (354)
Q Consensus       141 ~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vlI~  176 (354)
                      +++++++|++.+++.|+++++......+.|++|||+
T Consensus       164 ~~~~~~aa~l~~~l~t~~~av~~~~~~~~G~tVlv~  199 (199)
T d1cdoa1         164 SVKLDEFITHRMPLESVNDAIDLMKHGKCIRTVLSL  199 (199)
T ss_dssp             TSCCGGGEEEEEEGGGHHHHHHHHHTTCCSEEEEEC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHhCCCCCCCEEEeC
Confidence            999999999999999999998888889999999984

>d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=100.00  E-value=1.1e-36  Score=250.35  Aligned_cols=171  Identities=44%  Similarity=0.717  Sum_probs=152.3

Q ss_pred             ccchhcceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCC
Q 018529            6 GLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSD   85 (354)
Q Consensus         6 ~~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~   85 (354)
                      |..|||||+++++++++|+++++|+|+|+++||||||+++|||++|++++.|......+|+++|||++|+|+++|+++++
T Consensus         2 ~~~~~~kAav~~~~g~~l~i~evp~P~p~~~eVLVkv~a~gic~sD~~~~~G~~~~~~~p~v~GhE~~G~V~~vG~~V~~   81 (197)
T d2fzwa1           2 NEVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHLGAGIVESVGEGVTK   81 (197)
T ss_dssp             CCCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTCCTTCCSSBCCCCEEEEEEEEECTTCCS
T ss_pred             CCceEEEEEEEccCCCCCEEEEEECCCCCCCEEEEEEEEecCCCCcHHHHcCCcccccccccCCcceeeEEEeecCCcee
Confidence            56899999999999999999999999999999999999999999999999998777788999999999999999999999


Q ss_pred             CCCCCEEEecccCCCCCCcccccCCCCCC-------------------------cccccccccceeeEEeeccceEECCC
Q 018529           86 LEVGDHVLPVFTGECGDCRHCRFSINGEP-------------------------VNHFLGTSTFSEYTVVHSGCVAKINP  140 (354)
Q Consensus        86 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~-------------------------~~~~~~~g~~a~~~~v~~~~~~~~P~  140 (354)
                      +++||||++.+...|+.|.+|..+....+                         ..++.+.|+||||+++|+.+++++|+
T Consensus        82 ~~~GdrV~v~~~~~cg~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~g~GgfAey~vvp~~~~~~vp~  161 (197)
T d2fzwa1          82 LKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDP  161 (197)
T ss_dssp             CCTTCEEEECSSCCCSCSHHHHCTTCCCCCTTHHHHHTTCCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEECCT
T ss_pred             cCCCCEEEEccccccccccccccCccccCccccccccccccCCccceeccCCcceecccccccceeEEEechHHEEECCC
Confidence            99999999999999999999965433211                         12334458999999999999999999


Q ss_pred             CCCccchhhcccchhhhhhhhhhhcCCCCCCeEEEE
Q 018529          141 LAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVF  176 (354)
Q Consensus       141 ~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vlI~  176 (354)
                      ++++++|+++.+++.+++.++.....-+.+++|||+
T Consensus       162 ~l~~~~aa~~~~~~~t~~~a~~~~~~g~~~~tvvvi  197 (197)
T d2fzwa1         162 LIKVDEFVTHNLSFDEINKAFELMHSGKSIRTVVKI  197 (197)
T ss_dssp             TSCSGGGEEEEEEGGGHHHHHHHHHHTCCSEEEEEC
T ss_pred             CCCHHHHhhhhhHHHHHHHHHHhccCCCcCCEEEeC
Confidence            999999999999999999986555556788999884

>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=100.00  E-value=5.8e-36  Score=243.05  Aligned_cols=165  Identities=21%  Similarity=0.338  Sum_probs=143.2

Q ss_pred             cceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCC---CCCCCcccccceeEEEEEeCCCCCCCC
Q 018529           11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ---TPLFPRIFGHEAAGVVESVGEGVSDLE   87 (354)
Q Consensus        11 ~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~---~~~~p~~~G~e~~G~V~~vG~~~~~~~   87 (354)
                      |+|+ ++++++ |+++++|+|+|+++|||||++++|||++|++++.+...   ..++|+++|||++|+|+++|+++++|+
T Consensus         3 maAV-l~g~~~-l~~~e~~~P~~~~~evlVkv~a~gic~sD~~~~~~~~~~~~~~~~p~i~GhE~~G~Vv~vG~~v~~~~   80 (178)
T d1e3ja1           3 LSAV-LYKQND-LRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNVKHLK   80 (178)
T ss_dssp             EEEE-EEETTE-EEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSBSSSCBCCSCEECCCEEEEEEEEECTTCCSCC
T ss_pred             eEEE-EEcCCc-EEEEEeECCCCCCCEEEEEEEEEcccCchhhhhccCccccccccCCeeeccccceEEEecCcccCCCC
Confidence            4555 667777 99999999999999999999999999999998876432   245789999999999999999999999


Q ss_pred             CCCEEEecccCCCCCCcccccCCCC-CCccc----ccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhh
Q 018529           88 VGDHVLPVFTGECGDCRHCRFSING-EPVNH----FLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATL  162 (354)
Q Consensus        88 ~Gd~V~~~~~~~~~~c~~c~~~~~~-~~~~~----~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~  162 (354)
                      +||||++.+..+|+.|++|..+... +....    ....|+|+||+.+|+++++++|+++++++|+.+++++.|+|+++ 
T Consensus        81 ~GdrV~~~~~~~~~~c~~c~~g~~~~c~~~~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~a~-  159 (178)
T d1e3ja1          81 KGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDDGNLARYYVHAADFCHKLPDNCNVKQLVTHSFKLEQTVDAF-  159 (178)
T ss_dssp             TTCEEEECCEECCSSSHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTCCCGGGEEEEEEGGGHHHHH-
T ss_pred             CCCEEEECcccccCCccccccCCccccccccceeccccccccceeeeecccceeeCCCCCCHHHHHHHHhHHHHHHHHH-
Confidence            9999999999999999999765432 22222    23348999999999999999999999999999999999999995 


Q ss_pred             hhcCCCCCCeEEEEcC
Q 018529          163 NVAKPERGSSVAVFGL  178 (354)
Q Consensus       163 ~~~~~~~~~~vlI~G~  178 (354)
                      +.+++++|++|+|+|+
T Consensus       160 ~~~~~~~g~~VlVig~  175 (178)
T d1e3ja1         160 EAARKKADNTIKVMIS  175 (178)
T ss_dssp             HHHHHCCTTCSEEEEE
T ss_pred             HHhCCCCCCEEEEEcc
Confidence            7889999999999964

>d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=100.00  E-value=1.9e-35  Score=239.44  Aligned_cols=168  Identities=29%  Similarity=0.372  Sum_probs=146.1

Q ss_pred             cchhcceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCC-CCCCcccccceeEEEEEeCCCCCC
Q 018529            7 LILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSD   85 (354)
Q Consensus         7 ~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~~~~   85 (354)
                      +|.||||+++.+++++++++++|.|.|++|||||||.++|||++|++.+.|..+. ..+|.++|||++|+|+++|+++++
T Consensus         2 ~P~tMkA~v~~~~g~pl~l~evp~P~~~~~evlVkv~a~gic~~D~~~~~G~~~~~~~~P~i~GhE~~G~V~~~G~~v~~   81 (175)
T d1llua1           2 LPQTMKAAVVHAYGAPLRIEEVKVPLPGPGQVLVKIEASGVCHTDLHAAEGDWPVKPPLPFIPGHEGVGYVAAVGSGVTR   81 (175)
T ss_dssp             CCSEEEEEEBCSTTSCCEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHHTCSSSCCCSSBCCCSCEEEEEEEECTTCCS
T ss_pred             cchhcEEEEEEeCCCCCEEEEeECCCCCCCEEEEEEEEecCcccchhhhccCccccccCCcCCCCcceEEEEEeCCCccc
Confidence            7899999999999999999999999999999999999999999999999987653 568999999999999999999999


Q ss_pred             CCCCCEEEecc-cCCCCCCcccccCCCC----CCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhh
Q 018529           86 LEVGDHVLPVF-TGECGDCRHCRFSING----EPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGA  160 (354)
Q Consensus        86 ~~~Gd~V~~~~-~~~~~~c~~c~~~~~~----~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~  160 (354)
                      |++||||...+ ...|+.|.+|..+...    ....++...|+|+||+.+++++++++|++++++.++++.+++.++++.
T Consensus        82 ~~~GdrV~~~~~~~~~g~~~~~~~g~~~~~~~~~~~G~~~~gg~aey~~v~~~~~~~iPd~l~~~~a~~~~~~~~t~~~~  161 (175)
T d1llua1          82 VKEGDRVGIPWLYTACGCCEHCLTGWETLCESQQNTGYSVNGGYAEYVLADPNYVGILPKNVKATIHPGKLDDINQILDQ  161 (175)
T ss_dssp             CCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEECTTTSEECCTTCCCCEEEECGGGHHHHHHH
T ss_pred             cccCCEEEeccccccCCccccccCCcccccccccccccccccccceEEEechHHEEECCCCCChhHHHHHHhHHHHHHHH
Confidence            99999998765 4569999999765432    223445556899999999999999999999999998888899998887


Q ss_pred             hhhhcCCCCCCeEEEE
Q 018529          161 TLNVAKPERGSSVAVF  176 (354)
Q Consensus       161 l~~~~~~~~~~~vlI~  176 (354)
                      + + ++..+|++|||+
T Consensus       162 ~-~-~g~~~G~~VLVl  175 (175)
T d1llua1         162 M-R-AGQIEGRIVLEM  175 (175)
T ss_dssp             H-H-TTCCSSEEEEEC
T ss_pred             H-H-hCCCCCCEEEeC
Confidence            4 4 345579999984

>d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=100.00  E-value=2.3e-35  Score=244.37  Aligned_cols=168  Identities=38%  Similarity=0.704  Sum_probs=146.0

Q ss_pred             ccchhcceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCC
Q 018529            6 GLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSD   85 (354)
Q Consensus         6 ~~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~   85 (354)
                      ..||||||++++++++|++++++|.|+|+++||||||.++|||++|+++++|..+ ..+|.++|||++|+|+++|+++++
T Consensus         4 ~~~~~~KAaV~~~~g~pl~i~evp~P~p~~geVlVkv~a~gic~sD~~~~~G~~~-~~~P~v~GHE~~G~V~~vG~~V~~   82 (202)
T d1e3ia1           4 GKVIKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPKKK-ALFPVVLGHECAGIVESVGPGVTN   82 (202)
T ss_dssp             TSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHTTCTTSC-CCSSBCCCCEEEEEEEEECTTCCS
T ss_pred             CCeEEEEEEEEccCCCCCEEEEEECCCCCCCEEEEEEEEEEEeccccceeeeecc-cccccccccccceEEeeecCCcee
Confidence            4789999999999999999999999999999999999999999999999988654 467999999999999999999999


Q ss_pred             CCCCCEEEecccCCCCCCcccccCCCCCC-c----------------------------ccccccccceeeEEeeccceE
Q 018529           86 LEVGDHVLPVFTGECGDCRHCRFSINGEP-V----------------------------NHFLGTSTFSEYTVVHSGCVA  136 (354)
Q Consensus        86 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~-~----------------------------~~~~~~g~~a~~~~v~~~~~~  136 (354)
                      +++||||++.+...|+.|.+|+.+....+ .                            ++..+.|+|+||+.+++..++
T Consensus        83 ~~~GdrV~~~~~~~c~~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~G~faey~~v~~~~l~  162 (202)
T d1e3ia1          83 FKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLA  162 (202)
T ss_dssp             CCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGEE
T ss_pred             ccCCCEEEEEeeccccccccccCCcccccccccccccCccceecccccccccccCceeeecccccCCceEEEEEehhhEE
Confidence            99999999999999999999975532211 0                            122334899999999999999


Q ss_pred             ECCCCCCccchhhcccchhhhhhhhhhhcCCCCCCeEEEEc
Q 018529          137 KINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFG  177 (354)
Q Consensus       137 ~~P~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vlI~G  177 (354)
                      ++|++++++.++++.+++.+.+.++ +  .+++|++|.|+.
T Consensus       163 ~lP~~~~~~~~~~~~~~~~~~~~a~-~--~~k~G~~V~vi~  200 (202)
T d1e3ia1         163 RVDDEFDLDLLVTHALPFESINDAI-D--LMKEGKSIRTIL  200 (202)
T ss_dssp             ECCTTSCGGGGEEEEEEGGGHHHHH-H--HHHTTCCSEEEE
T ss_pred             ECCCCCCHHHHHHHHHHHHHHHHHH-H--hCCCCCEEEEEE
Confidence            9999999999998988888888775 2  347899998763

>d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=1.9e-35  Score=239.08  Aligned_cols=163  Identities=20%  Similarity=0.291  Sum_probs=140.1

Q ss_pred             cchhcceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCC--
Q 018529            7 LILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVS--   84 (354)
Q Consensus         7 ~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~--   84 (354)
                      |+|+|||+++.++++++++++++.|+|++|||||||.++|||++|+++++|..+...+|+++|||++|+|+++|++++  
T Consensus         1 m~~k~kA~v~~~~~~pl~i~ev~~P~~~~~evlVkv~a~gIC~sD~~~~~G~~~~~~~P~vlGHE~~G~V~~vG~~v~~~   80 (184)
T d1vj0a1           1 MGLKAHAMVLEKFNQPLVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPRVPLPIILGHEGAGRVVEVNGEKRDL   80 (184)
T ss_dssp             CCEEEEEEEBCSTTSCCEEEEEEECCCCTTCEEEEEEEEEECHHHHHHHTTCCTTCCSSBCCCCEEEEEEEEESSCCBCT
T ss_pred             CCceEEEEEEecCCCCcEEEEeeCCCCCCCEEEEEEEEECCCCCchhheeccCCccccccccceeeeeeeeEEecccccc
Confidence            567999999999999999999999999999999999999999999999999877677899999999999999999986  


Q ss_pred             ---CCCCCCEEEecccCCCCCCcccccCCCC--CCc---ccc--------cccccceeeEEee-ccceEECCCCCCccch
Q 018529           85 ---DLEVGDHVLPVFTGECGDCRHCRFSING--EPV---NHF--------LGTSTFSEYTVVH-SGCVAKINPLAPLDKV  147 (354)
Q Consensus        85 ---~~~~Gd~V~~~~~~~~~~c~~c~~~~~~--~~~---~~~--------~~~g~~a~~~~v~-~~~~~~~P~~~~~~~a  147 (354)
                         .+++||+|+..+..+|++|.+|+.+...  +.+   +++        ...|+|+||+.++ +.+++++|+++++++ 
T Consensus        81 ~~~~~~~Gd~V~~~~~~~Cg~C~~C~~g~~~~~c~~~~~~G~~~~~~~~~~~~Gg~ae~~~v~~~~~v~~ip~~l~~~~-  159 (184)
T d1vj0a1          81 NGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPHLRGCYSSHIVLDPETDVLKVSEKITHRL-  159 (184)
T ss_dssp             TSCBCCTTCEEEECSEECCSSSHHHHTSCCGGGCTTCEETTTTCCSSSTTCCCSSSBSEEEECTTCCEEEECTTCCEEE-
T ss_pred             ccccccceeeeEeccccccccChhHhCccccccCCCceeeccCCCCCCCCCcceeCcCcEEechhHcEEECCCCCCHHH-
Confidence               4689999999999999999999765421  222   221        1258999999996 579999999998764 


Q ss_pred             hhcccchhhhhhhhhhhcCCCCCCeEEEE
Q 018529          148 CILSCGVSTGLGATLNVAKPERGSSVAVF  176 (354)
Q Consensus       148 a~l~~~~~~a~~~l~~~~~~~~~~~vlI~  176 (354)
                           ++++|++++ +++++++|++|||+
T Consensus       160 -----pl~~A~~a~-~~~~~~~G~~VlI~  182 (184)
T d1vj0a1         160 -----PLKEANKAL-ELMESREALKVILY  182 (184)
T ss_dssp             -----EGGGHHHHH-HHHHHTSCSCEEEE
T ss_pred             -----HHHHHHHHH-HHhCCCcCCEEEEe
Confidence                 456777774 77899999999997

>d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=100.00  E-value=1.1e-34  Score=237.38  Aligned_cols=165  Identities=29%  Similarity=0.530  Sum_probs=141.0

Q ss_pred             hhcceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCCC
Q 018529            9 LTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEV   88 (354)
Q Consensus         9 ~~~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~   88 (354)
                      ++|+|+++.+.+++|+++++|.|+|++|||||||.++|||++|++++.|..+ .++|+++|||++|+|+++|+++++|++
T Consensus         2 k~~~Aav~~~~g~~l~l~~v~~P~p~~geVlVkv~a~gic~sD~~~~~G~~~-~~~P~i~GHE~~G~V~~vG~~v~~~~v   80 (194)
T d1f8fa1           2 KDIIAAVTPCKGADFELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYP-VPLPAVLGHEGSGIIEAIGPNVTELQV   80 (194)
T ss_dssp             EEEEEEEBCSTTCCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSC-CCSSBCCCCEEEEEEEEECTTCCSCCT
T ss_pred             ceeEEEEEcCCCCCcEEEEeeCCCCCCCEEEEEEEEEEecCchHhhhhhccc-ccCCcccccceEEEeeecCccceeEcc
Confidence            4789999999999999999999999999999999999999999999988655 467999999999999999999999999


Q ss_pred             CCEEEecccCCCCCCcccccCCCC-CC--------------------------cccccccccceeeEEeeccceEECCCC
Q 018529           89 GDHVLPVFTGECGDCRHCRFSING-EP--------------------------VNHFLGTSTFSEYTVVHSGCVAKINPL  141 (354)
Q Consensus        89 Gd~V~~~~~~~~~~c~~c~~~~~~-~~--------------------------~~~~~~~g~~a~~~~v~~~~~~~~P~~  141 (354)
                      ||||+.. ..+|++|.+|+.+... |.                          ..+..+.|+|+||+.+++.+++++|++
T Consensus        81 GDrVv~~-~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~dg~~~~~~~~~~~~~~~~~~~g~fae~~~v~~~~~~~ip~~  159 (194)
T d1f8fa1          81 GDHVVLS-YGYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKD  159 (194)
T ss_dssp             TCEEEEC-CCCCSSSHHHHTTCGGGCTTHHHHSSSSSCSSSCCSBC------CBCCGGGTCCSBSEEEEEGGGEEEECTT
T ss_pred             Cceeeee-cccccCChhhhCCCcccccccccceeccccccceeeeecCCceeeccccccccccceeEEEehHHEEECCCC
Confidence            9999655 5589999999755421 11                          112234489999999999999999999


Q ss_pred             CCccchhhcccchhhhhhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEE
Q 018529          142 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGV  200 (354)
Q Consensus       142 ~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v  200 (354)
                      ++++++                         ++|.|+|++|++++|+|+.+|+++|+++
T Consensus       160 i~~~~~-------------------------~~i~g~g~~g~~aiq~a~~~g~~~iiaV  193 (194)
T d1f8fa1         160 FPFDQL-------------------------VKFYAFDEINQAAIDSRKGITLKPIIKI  193 (194)
T ss_dssp             CCGGGG-------------------------EEEEEGGGHHHHHHHHHHTSCSEEEEEC
T ss_pred             CCcccE-------------------------EEEeCcHHHHHHHHHHHHHcCCCEEEEe
Confidence            876543                         3456789999999999999999788776

>d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=100.00  E-value=1.4e-34  Score=232.70  Aligned_cols=162  Identities=27%  Similarity=0.329  Sum_probs=143.4

Q ss_pred             ceeeeccCCCceEEEEeecCCC-CCCeEEEEEeeeecCccchhhhccCCC---CCCCCcccccceeEEEEEeCCCCCCCC
Q 018529           12 KAAVAWEAGKPLIIQDVEVAPP-QAMEVRIKIKYTSLCRTDLYFWESKGQ---TPLFPRIFGHEAAGVVESVGEGVSDLE   87 (354)
Q Consensus        12 ~a~~~~~~~~~l~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~~~~~---~~~~p~~~G~e~~G~V~~vG~~~~~~~   87 (354)
                      ||+++.++++||++++++.|++ +++||||||.|++||++|++.+.|...   ...+|+++|||++|+|+++|+++++++
T Consensus         1 kA~~~~~~g~pl~i~~v~~P~~~~~~eVlVkv~a~gic~sD~~~~~g~~~~~~~~~~P~v~GhE~~G~V~~vG~~v~~~~   80 (171)
T d1h2ba1           1 KAARLHEYNKPLRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEEVAEGVEGLE   80 (171)
T ss_dssp             CEEEESSTTSCCEEECCCCCCCBTTBCEEEEEEEEECCHHHHHHHHTTTHHHHCCCSSEECCCCEEEEEEEECTTCCSCC
T ss_pred             CEEEEEeCCCCCEEEEeeCCCCCCCCEEEEEEEecccceeeehccCCCcccccCCccccccceeeeeeeecccCCCCcCC
Confidence            7999999999999999999985 689999999999999999999887553   246799999999999999999999999


Q ss_pred             CCCEEEecccCCCCCCcccccCCCC----CCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhh
Q 018529           88 VGDHVLPVFTGECGDCRHCRFSING----EPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLN  163 (354)
Q Consensus        88 ~Gd~V~~~~~~~~~~c~~c~~~~~~----~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~  163 (354)
                      +||||++.+...|++|.+|+.+...    ....++...|+||||+.++++.++++|++++++.++++.+++.|+|+++ +
T Consensus        81 ~GdrV~~~~~~~cg~~~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~e~aa~~~~~~~ta~~al-~  159 (171)
T d1h2ba1          81 KGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGLNIDGGFAEFMRTSHRSVIKLPKDVRVEVDIHKLDEINDVLERL-E  159 (171)
T ss_dssp             TTCEEEECSCBCCSCSHHHHTTCGGGCTTCBCBTTTBCCSSBSEEEECGGGEEECCTTCCCCEEEEEGGGHHHHHHHH-H
T ss_pred             CCCEEEEcCccCCCCcccccccccccccccccceeecccccceeeeehhhcceecCCCCCHHHHHHHHhHHHHHHHHH-H
Confidence            9999999999999999999765422    2234444569999999999999999999999998998989999999996 6


Q ss_pred             hcCCCCCCeEEE
Q 018529          164 VAKPERGSSVAV  175 (354)
Q Consensus       164 ~~~~~~~~~vlI  175 (354)
                      .+.+ .|++|||
T Consensus       160 ~~~~-~G~~VlI  170 (171)
T d1h2ba1         160 KGEV-LGRAVLI  170 (171)
T ss_dssp             TTCC-SSEEEEE
T ss_pred             hcCC-CCCEEEe
Confidence            6777 8999998

>d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.5e-34  Score=235.85  Aligned_cols=169  Identities=17%  Similarity=0.211  Sum_probs=143.4

Q ss_pred             cchhcceeeeccCCCc--eEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCC-
Q 018529            7 LILTCKAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGV-   83 (354)
Q Consensus         7 ~~~~~~a~~~~~~~~~--l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~-   83 (354)
                      +|.||||+.+.+++..  +++.+.+.++++++||||||.|+|||++|++++.|..+...+|+++|||++|+|+++|+++ 
T Consensus         3 ~P~~~ka~~~~~~~~~~~~~~~~~~p~p~~~~eVlVkv~a~giC~sDl~~~~g~~~~~~~P~i~GHE~~G~Vv~vG~~v~   82 (192)
T d1piwa1           3 YPEKFEGIAIQSHEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGNMKMPLVVGHEIVGKVVKLGPKSN   82 (192)
T ss_dssp             TTTCEEEEEECCSSSTTSCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTTTSCCCSSEECCCCEEEEEEEECTTCC
T ss_pred             CCceeEEEEEeCCCcCCcceEeeccCCCCCCCeEEEEEeeeCCCcchHHHHcCCCCCCCCCcCcccccccchhhcccccc
Confidence            7999999999888764  7788888777899999999999999999999999887777889999999999999999998 


Q ss_pred             CCCCCCCEEEeccc-CCCCCCcccccCCCC-CC----------cccccccccceeeEEeeccceEECCCCCCccchhhcc
Q 018529           84 SDLEVGDHVLPVFT-GECGDCRHCRFSING-EP----------VNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILS  151 (354)
Q Consensus        84 ~~~~~Gd~V~~~~~-~~~~~c~~c~~~~~~-~~----------~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~  151 (354)
                      +.+++||||...+. ..|+.|..|+.+... |.          ..+....|+||||+++++++++++|+++++++|+.+.
T Consensus        83 ~~~k~GdrV~~~~~~~~c~~c~~c~~g~~~~C~~~~~~~~~~~~~G~~~~Ggfaey~~v~~~~~~~iP~~l~~e~Aal~~  162 (192)
T d1piwa1          83 SGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPIPENIWVETLPVGE  162 (192)
T ss_dssp             SSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSCBCTTSCBCCCSSBSEEEEEGGGEEECCTTCCEEEEESSH
T ss_pred             cccCCCCeeeEeeeccCCCCchhhhcCCcccccccccccccccccccccccceeeEEEeehHHeEECCCCCCHHHHHHHH
Confidence            56999999976654 479999999755421 11          1234456999999999999999999999998877666


Q ss_pred             cchhhhhhhhhhhcCCCCCCeEEEE
Q 018529          152 CGVSTGLGATLNVAKPERGSSVAVF  176 (354)
Q Consensus       152 ~~~~~a~~~l~~~~~~~~~~~vlI~  176 (354)
                      +.+.+||+++ +.++++++++|||.
T Consensus       163 ~~~~ta~~~l-~~~~vk~g~~Vvv~  186 (192)
T d1piwa1         163 AGVHEAFERM-EKGDVRYRFTLVGY  186 (192)
T ss_dssp             HHHHHHHHHH-HHTCCSSEEEEECC
T ss_pred             HHHHHHHHHH-HHhCCCCCCEEEEE
Confidence            5577999985 67999999999974

>d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.6e-34  Score=232.29  Aligned_cols=166  Identities=20%  Similarity=0.301  Sum_probs=140.9

Q ss_pred             hcceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCC---CCCCCCcccccceeEEEEEeCCCCCCC
Q 018529           10 TCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKG---QTPLFPRIFGHEAAGVVESVGEGVSDL   86 (354)
Q Consensus        10 ~~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~---~~~~~p~~~G~e~~G~V~~vG~~~~~~   86 (354)
                      .+.|++++++++ ++++++++|+|+++||||||.++|||++|++.+.+..   ...++|+++|||++|+|+++|+++++|
T Consensus         7 ~~~a~V~~gp~~-l~l~evp~P~p~~~eVlVkv~a~gic~sD~~~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~   85 (185)
T d1pl8a1           7 NNLSLVVHGPGD-LRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSVKHL   85 (185)
T ss_dssp             CCEEEEEEETTE-EEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSEETTEECSSCEECCCEEEEEEEEECTTCCSC
T ss_pred             CCEEEEEeCCCe-EEEEEeECCCCCCCEEEEEEEEEEeeCchhhhhccccccccCCCCCeeeeeeeeeeEEEeccceeee
Confidence            568999999987 9999999999999999999999999999999987642   224678999999999999999999999


Q ss_pred             CCCCEEEecccCCCCCCcccccCCC-CCCcccc----cccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhh
Q 018529           87 EVGDHVLPVFTGECGDCRHCRFSIN-GEPVNHF----LGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGAT  161 (354)
Q Consensus        87 ~~Gd~V~~~~~~~~~~c~~c~~~~~-~~~~~~~----~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l  161 (354)
                      ++||||++.+...|++|.+|+.+.. .+....+    ...|+|+||+.+++++++++|+++++++|++++  +.+++++ 
T Consensus        86 ~~GdrV~~~~~~~cg~c~~c~~G~~~~c~~~~~~g~~~~~G~~aey~~~~~~~~~~lP~~~~~~~aa~~p--l~~a~~a-  162 (185)
T d1pl8a1          86 KPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGNLCRFYKHNAAFCYKLPDNVKPLVTHRFP--LEKALEA-  162 (185)
T ss_dssp             CTTCEEEECSEECSSCCHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTCGGGEEEEEE--GGGHHHH-
T ss_pred             cccccceecceeccccchhhccchhchhccceeeecccccccceEEEEEchHHEEECCCCCCHHHHHHHH--HHHHHHH-
Confidence            9999999999999999999976643 2222222    234889999999999999999999999987654  4567777 


Q ss_pred             hhhcCCCCCCeEEEEcCCh
Q 018529          162 LNVAKPERGSSVAVFGLGA  180 (354)
Q Consensus       162 ~~~~~~~~~~~vlI~G~g~  180 (354)
                      ++..++++|++||| |+|+
T Consensus       163 ~~~~~~~~G~~VlI-g~GP  180 (185)
T d1pl8a1         163 FETFKKGLGLKIML-KCDP  180 (185)
T ss_dssp             HHHHHTTCCSEEEE-ECCT
T ss_pred             HHHhCCCCCCEEEE-EeCC
Confidence            46778899999998 6654

>d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=100.00  E-value=1.6e-35  Score=238.51  Aligned_cols=164  Identities=20%  Similarity=0.150  Sum_probs=134.7

Q ss_pred             cceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 018529           11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD   90 (354)
Q Consensus        11 ~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd   90 (354)
                      |||+++.++++ ++++++|.|.|+++|||||++++|||++|++.+.+......+|+++|||++|+|+++|+++++|++||
T Consensus         1 MKa~v~~~~~~-l~i~e~p~P~~~~~eVlIkv~a~gic~sD~~~~~~~~~~~~~P~i~GhE~~G~V~~vG~~v~~~~vGd   79 (177)
T d1jqba1           1 MKGFAMLGINK-LGWIEKERPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGDRKNMILGHEAVGEVVEVGSEVKDFKPGD   79 (177)
T ss_dssp             CEEEEEEETTE-EEEEECCCCCCCTTCEEEEEEEECCCHHHHHHHHHCTTCCCSSEECCCCEEEEEEEECTTCCSCCTTC
T ss_pred             CeEEEEEeCCC-eEEEEeeCCCCCCCEEEEEEEEEecCCCcccccccCCCCCCCCccCcceeeEEeeecccccceecCCC
Confidence            89999999998 99999999999999999999999999999988876666567899999999999999999999999999


Q ss_pred             EEEecccCCCCCCcccccCCCCCC-------cccccccccceeeEEeec--cceEECCCCCCccchhhcccchhhhhhhh
Q 018529           91 HVLPVFTGECGDCRHCRFSINGEP-------VNHFLGTSTFSEYTVVHS--GCVAKINPLAPLDKVCILSCGVSTGLGAT  161 (354)
Q Consensus        91 ~V~~~~~~~~~~c~~c~~~~~~~~-------~~~~~~~g~~a~~~~v~~--~~~~~~P~~~~~~~aa~l~~~~~~a~~~l  161 (354)
                      ||++.+..+|++|++|+.+....+       .++....|+|+||+++|.  .+++++|+++++++++...+   +++..+
T Consensus        80 rV~v~~~~~cg~c~~C~~g~~~~c~~~~~~~~~g~~~~G~~aEy~~vp~a~~~l~~iP~~~~~~~~~~~~~---~~~~~~  156 (177)
T d1jqba1          80 RVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNFKDGVFGEYFHVNDADMNLAILPKDVDLSKLVTHVY---HGFDHI  156 (177)
T ss_dssp             EEEECSCCCCSSSHHHHTTCGGGTTSTTTTCCBTTTBCCSSBSSEEESSHHHHCEECCTTSCGGGGEEEEE---ESGGGH
T ss_pred             cEEEeeeeccccccchhhhhhcccccccccccccCCCChhcCeeEEEEhhhCeEEECCCCcchHHHHHHHH---HHHHHh
Confidence            999999999999999976543221       223335599999999986  37999999999887764432   223222


Q ss_pred             hhhcCCCCCCeEEEEcCChhHHHHH
Q 018529          162 LNVAKPERGSSVAVFGLGAVGLAAA  186 (354)
Q Consensus       162 ~~~~~~~~~~~vlI~G~g~~G~~a~  186 (354)
                              ++.++|+|+|++|+.++
T Consensus       157 --------~~~vlv~g~gp~gl~aa  173 (177)
T d1jqba1         157 --------EEALLLMKDKPKDLIKA  173 (177)
T ss_dssp             --------HHHHHHHHHCCTTCSEE
T ss_pred             --------cCceEEECCCHHHhhee
Confidence                    34577778888776543

>d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=100.00  E-value=1e-33  Score=232.69  Aligned_cols=167  Identities=41%  Similarity=0.678  Sum_probs=138.9

Q ss_pred             ccchhcceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCC
Q 018529            6 GLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSD   85 (354)
Q Consensus         6 ~~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~   85 (354)
                      ..+.||||+++++++++++++++|.|+|+++||||||.|+|||++|++++.|..+ ..+|.++|||++|+|+++|+++++
T Consensus         4 ~~~~~~KAav~~~~g~~l~i~ev~~P~p~~~eVlVkv~a~gICgsDlh~~~G~~~-~~~P~i~GHE~~G~Vv~~G~~v~~   82 (198)
T d1p0fa1           4 GKDITCKAAVAWEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIP-SKFPVILGHEAVGVVESIGAGVTC   82 (198)
T ss_dssp             TSCEEEEEEEBSSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSC-CCSSBCCCCCEEEEEEEECTTCCS
T ss_pred             CCceEEEEEEEccCCCCCEEEEEECCCCCCCEEEEEEEEEEEecccceeeeeccc-cccccccceeeeeeeeecCccccc
Confidence            3567999999999999999999999999999999999999999999999988665 467999999999999999999999


Q ss_pred             CCCCCEEEecccCCCCCCcccccCCCCCCc-------------------------ccccccccceeeEEeeccceEECCC
Q 018529           86 LEVGDHVLPVFTGECGDCRHCRFSINGEPV-------------------------NHFLGTSTFSEYTVVHSGCVAKINP  140 (354)
Q Consensus        86 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~-------------------------~~~~~~g~~a~~~~v~~~~~~~~P~  140 (354)
                      +++||||++.+..+|++|.+|+.+....+.                         +.....|+|+||+.+++..++++|+
T Consensus        83 ~~~GdrV~~~~~~~Cg~c~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~faey~~v~~~~~~kip~  162 (198)
T d1p0fa1          83 VKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKIDP  162 (198)
T ss_dssp             CCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCSTTTCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEETTSEEEECT
T ss_pred             CcCCCEEEEEeeccccccccccccccccchhhhccccccccCCCceeEeeCCeeccccCCCccceeeEEecHHHEEECCC
Confidence            999999999999999999999654432110                         1122348999999999999999999


Q ss_pred             CCCccchhhcccchhhhhhhhhhhcCCCCCCeEEEEcCChhHH
Q 018529          141 LAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGL  183 (354)
Q Consensus       141 ~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vlI~G~g~~G~  183 (354)
                      .++...++...+...          .+.+++.|||.|+|++|+
T Consensus       163 ~~~~~~~~~~~~~~~----------~v~~~~~vlv~G~G~iGl  195 (198)
T d1p0fa1         163 KINVNFLVSTKLTLD----------QINKAFELLSSGQGVRSI  195 (198)
T ss_dssp             TSCGGGGEEEEECGG----------GHHHHHHHTTTSSCSEEE
T ss_pred             CCCHHHHHHhhcchh----------hcCCCCEEEEECCCcceE
Confidence            998776655443332          233445688889888875

>d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=100.00  E-value=1e-35  Score=244.61  Aligned_cols=177  Identities=21%  Similarity=0.255  Sum_probs=146.8

Q ss_pred             cceeeeccCCCceEEEEeecCCC-------CCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCC
Q 018529           11 CKAAVAWEAGKPLIIQDVEVAPP-------QAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGV   83 (354)
Q Consensus        11 ~~a~~~~~~~~~l~~~~~~~p~~-------~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~   83 (354)
                      +||++++++++ +++++++.|++       .++||+|||.+++||++|++++.|..+ ..+|+++|||++|+|+++|+++
T Consensus         2 ~kA~v~~~~~~-le~~e~~~P~~~~p~~~p~~~eVlVkv~a~giC~sDl~~~~G~~~-~~~P~v~GHE~~G~Vv~vG~~V   79 (201)
T d1kola1           2 NRGVVYLGSGK-VEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTT-AQVGLVLGHEITGEVIEKGRDV   79 (201)
T ss_dssp             EEEEEEEETTE-EEEEEECCCCSBCTTSCBCSSCEEEEEEEEECCHHHHHHHTTCSC-CCTTCBCCCCEEEEEEEECTTC
T ss_pred             cEEEEEeCCCc-eEEEEecCCcccCCCCCCCCCEEEEEEEEEEEcchhhhhhcCCcc-cccceeccceeeeeeecccccc
Confidence            69999999998 99999999965       469999999999999999999988665 4679999999999999999999


Q ss_pred             CCCCCCCEEEecccCCCCCCcccccCCCC---CC----ccc-------ccccccceeeEEeec--cceEECCCCCCccch
Q 018529           84 SDLEVGDHVLPVFTGECGDCRHCRFSING---EP----VNH-------FLGTSTFSEYTVVHS--GCVAKINPLAPLDKV  147 (354)
Q Consensus        84 ~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~---~~----~~~-------~~~~g~~a~~~~v~~--~~~~~~P~~~~~~~a  147 (354)
                      ++|++||||++.+..+|++|.+|+.+...   ..    ..+       ....|+|+||+++|.  .+++++|++.+..++
T Consensus        80 ~~~~vGdrV~v~~~~~Cg~C~~C~~g~~~~~~~~~~~~~~~~~g~~~~~~~~Gg~aeyv~vp~~~~~l~~iPd~~~~~~~  159 (201)
T d1kola1          80 ENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTGGQAEYVLVPYADFNLLKLPDRDKAMEK  159 (201)
T ss_dssp             CSCCTTCEEECCSEECCSSSHHHHTTCGGGCSSSCSSSSCEEBTCTTSCCBCCCSBSEEEESSHHHHCEECSCHHHHHHT
T ss_pred             ccccccceeEEeeeeeccCChhhhCCCcccccccccccccccccccCCCccccccccEEEeehHHCeEEECCCCCChHHH
Confidence            99999999999999999999999765421   10    000       122489999999985  379999998777777


Q ss_pred             hhcccchhhhhhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCC
Q 018529          148 CILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGA  194 (354)
Q Consensus       148 a~l~~~~~~a~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~  194 (354)
                      +++..++.++++++ .....+.+    ++|+|++|++++|+||.+|+
T Consensus       160 ~~~~~~~~~~~~a~-~~~~~~~g----~~g~G~vG~~~i~~ak~~GA  201 (201)
T d1kola1         160 INIAEVVGVQVISL-DDAPRGYG----EFDAGVPKKFVIDPHKTFSA  201 (201)
T ss_dssp             CCHHHHHTEEEECG-GGHHHHHH----HHHHTCSCEEEECTTCSSCC
T ss_pred             HHHHHHHHHHHHHH-HhCCCCCe----EEeeCHHHHHHHHHHHHcCC
Confidence            87877888888874 44444444    35899999999999999885

>d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=100.00  E-value=8.7e-33  Score=227.82  Aligned_cols=167  Identities=44%  Similarity=0.704  Sum_probs=139.2

Q ss_pred             ccchhcceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCC
Q 018529            6 GLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSD   85 (354)
Q Consensus         6 ~~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~   85 (354)
                      ..+++|||++++++++++++++++.|+|+++||||||.++|||++|++.+.|..+ ..+|.++|||++|+|+++|+++++
T Consensus         4 ~~~~k~KAavl~~~~~~l~i~ev~~P~p~~~eVlVkV~a~giC~sDl~~~~G~~~-~~~P~i~GHE~~G~Vv~vG~~v~~   82 (198)
T d2jhfa1           4 GKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLV-TPLPVIAGHEAAGIVESIGEGVTT   82 (198)
T ss_dssp             TSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTSSC-CCSSBCCCCSEEEEEEEECTTCCS
T ss_pred             CCceEEEEEEEecCCCCCEEEEEECCCCCCCEEEEEEEEEecccccceeecCCcc-cccceecccceeEEEEecCccccC
Confidence            4689999999999999999999999999999999999999999999999998655 467999999999999999999999


Q ss_pred             CCCCCEEEecccCCCCCCcccccCCCCCC-------------------------cccccccccceeeEEeeccceEECCC
Q 018529           86 LEVGDHVLPVFTGECGDCRHCRFSINGEP-------------------------VNHFLGTSTFSEYTVVHSGCVAKINP  140 (354)
Q Consensus        86 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~-------------------------~~~~~~~g~~a~~~~v~~~~~~~~P~  140 (354)
                      +++||||++.+..+|+.|.+|+.+....+                         .+.+.+.|+|+||+++|+.+++++|+
T Consensus        83 ~~vGdrV~v~~~~~c~~c~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~fAEy~~v~~~~~~~~p~  162 (198)
T d2jhfa1          83 VRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDA  162 (198)
T ss_dssp             CCTTCEEEECSSCCCSCSHHHHSTTCCCCTTCSSSSCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEEGGGEEECCT
T ss_pred             cCCCCEEEEeeeecccccccccCCccceeccccccccCccccCccccccccCceeccCCCCCcccCeEEeCHHHeEECCC
Confidence            99999999999999999999965432111                         01122348999999999999999999


Q ss_pred             CCCccchhhcccchhhhhhhhhhhcCCCCCCeEEEE
Q 018529          141 LAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVF  176 (354)
Q Consensus       141 ~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vlI~  176 (354)
                      .++++.++...+++.....+   ...+++|++|+|+
T Consensus       163 ~~~~e~l~~~~~~~~~v~~g---~~~l~~G~~VaVi  195 (198)
T d2jhfa1         163 AFALDPLITHVLPFEKINEG---FDLLRSGESIRTI  195 (198)
T ss_dssp             TSCCGGGEEEEEEGGGHHHH---HHHHHTTCCSEEE
T ss_pred             CCCHHHHHHHHHHHHhhhhC---CceeeCCCEEEEE
Confidence            99887766655554433322   2346889999886

>d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=99.98  E-value=2.3e-32  Score=221.60  Aligned_cols=163  Identities=24%  Similarity=0.333  Sum_probs=134.8

Q ss_pred             cceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCC--------CCCCCcccccceeEEEEEeCCC
Q 018529           11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ--------TPLFPRIFGHEAAGVVESVGEG   82 (354)
Q Consensus        11 ~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~--------~~~~p~~~G~e~~G~V~~vG~~   82 (354)
                      |||++++++|+||++++++.|+|++|||||||.++|||++|+++++|..+        ..++|+++|||++|+|+++|+.
T Consensus         1 MKA~~~~~~G~pl~i~dv~~P~p~~~eVlVkv~a~gic~~D~~~~~G~~~~~~~~~~~~~~~P~v~GhE~~G~V~~~g~~   80 (177)
T d1jvba1           1 MRAVRLVEIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDE   80 (177)
T ss_dssp             CEEEEECSTTSCCEEEECCCCCCCTTCEEEEEEEEEECTHHHHHTTTEETTEETTTTTCCCSCEECCCEEEEEEEEECTT
T ss_pred             CeEEEEEeCCCCCEEEEeeCCCCCCCEEEEEEEEEecccceeeeecCcccccccccccccCCCccccceEEEEEeeeccC
Confidence            89999999999999999999999999999999999999999999987532        3468999999999999999999


Q ss_pred             CCCCCCCCEEEecccCCCCCCcccccCCCC-C---CcccccccccceeeEEeeccc-eEECCCCCCccchhhcccchhhh
Q 018529           83 VSDLEVGDHVLPVFTGECGDCRHCRFSING-E---PVNHFLGTSTFSEYTVVHSGC-VAKINPLAPLDKVCILSCGVSTG  157 (354)
Q Consensus        83 ~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~-~---~~~~~~~~g~~a~~~~v~~~~-~~~~P~~~~~~~aa~l~~~~~~a  157 (354)
                      +++|++||||++.+...|+.|.+|+.+... |   ...+....|+||||+.++... ++++|+..+.+.|+.+..++.++
T Consensus        81 v~~~~~GdrV~~~~~~~c~~c~~~~~g~~~~c~~~~~~g~~~~G~~aey~~vp~~~~~~~~~~~~~~~~a~~~~~~~~~a  160 (177)
T d1jvba1          81 VVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYVIVPHYKYMYKLRRVKPMITKTMKLEEANEA  160 (177)
T ss_dssp             CCSCCTTCEEEECCEECCSSSHHHHTTCGGGCSSCEEBTTTBCCSSBSEEEESCGGGEEECSSSCCCCEEEEEGGGHHHH
T ss_pred             ccccccCceEeeeeccccccccccccccccccCCcceeeeccccccccEEEEEhHHeEEECCCCChHHHHHHHHHHHHHH
Confidence            999999999999999999999999765432 2   223344459999999997654 56666655544444445688899


Q ss_pred             hhhhhhhcCCCCCCeEEE
Q 018529          158 LGATLNVAKPERGSSVAV  175 (354)
Q Consensus       158 ~~~l~~~~~~~~~~~vlI  175 (354)
                      ++++ +..++ .|++|||
T Consensus       161 ~~~~-~~~~~-~G~~VlI  176 (177)
T d1jvba1         161 IDNL-ENFKA-IGRQVLI  176 (177)
T ss_dssp             HHHH-HTTCC-CSEEEEE
T ss_pred             HHHH-Hhhcc-cCCceEC
Confidence            9885 55665 5899987

>d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.98  E-value=3e-32  Score=219.83  Aligned_cols=164  Identities=29%  Similarity=0.395  Sum_probs=134.6

Q ss_pred             cceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCC-CCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 018529           11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKG-QTPLFPRIFGHEAAGVVESVGEGVSDLEVG   89 (354)
Q Consensus        11 ~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~-~~~~~p~~~G~e~~G~V~~vG~~~~~~~~G   89 (354)
                      |||++++++++++++++++.|+|++|||||||+++|||++|++++.+.. ....+|.++|||++|+|+++|++++++++|
T Consensus         1 MkA~v~~~~g~pl~i~~v~~P~~~~~eVlVkv~a~gic~sD~~~~~~~~~~~~~~p~v~GhE~~G~Vv~vG~~v~~~~vG   80 (171)
T d1rjwa1           1 MKAAVVEQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGIVEEVGPGVTHLKVG   80 (171)
T ss_dssp             CEEEEBSSTTSCCEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSCEEEEEEEECTTCCSCCTT
T ss_pred             CeEEEEecCCCCcEEEEeECCCCCCCeEEEEEEEeeccccceeeeecccccccccccccCCEEEEEEEEecccccCceee
Confidence            8999999999999999999999999999999999999999999887653 346789999999999999999999999999


Q ss_pred             CEEEeccc-CCCCCCcccccCCCC----CCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhh
Q 018529           90 DHVLPVFT-GECGDCRHCRFSING----EPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNV  164 (354)
Q Consensus        90 d~V~~~~~-~~~~~c~~c~~~~~~----~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~  164 (354)
                      |||++.+. ..|+.|..|..+...    ....+....|+||||+.+++++++++|++++++.|+ +. .+.++++++. .
T Consensus        81 drV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~e~A~-l~-~~~~~~~~~~-~  157 (171)
T d1rjwa1          81 DRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVDGGYAEYCRAAADYVVKIPDNTIIEVQP-LE-KINEVFDRML-K  157 (171)
T ss_dssp             CEEEECSEEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGCEECCTTCCEEEEE-GG-GHHHHHHHHH-T
T ss_pred             eEEeeccccccccccccccCCCccccccccccceeccCccccceEecHHHEEECCCCCCHHHHH-HH-HHHHHHHHHH-h
Confidence            99986554 457788877644322    223344455999999999999999999999987654 44 4566777643 4


Q ss_pred             cCCCCCCeEEEEcC
Q 018529          165 AKPERGSSVAVFGL  178 (354)
Q Consensus       165 ~~~~~~~~vlI~G~  178 (354)
                      +.+ +|++|||+|-
T Consensus       158 ~~~-~G~tVlViG~  170 (171)
T d1rjwa1         158 GQI-NGRVVLTLED  170 (171)
T ss_dssp             TCC-SSEEEEECCC
T ss_pred             cCC-CCCEEEEeCC
Confidence            555 5999999873

>d1yb5a1 b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=7.8e-32  Score=211.63  Aligned_cols=145  Identities=21%  Similarity=0.313  Sum_probs=131.8

Q ss_pred             hcceeeeccCCCc--eEEE-EeecCCCCCCeEEEEEeeeecCccchhhhccCCCC-CCCCcccccceeEEEEEeCCCCCC
Q 018529           10 TCKAAVAWEAGKP--LIIQ-DVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSD   85 (354)
Q Consensus        10 ~~~a~~~~~~~~~--l~~~-~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~~~~   85 (354)
                      .|||++++++|.+  +++. +++.|+|++|||||||.++++|++|++.+.|..+. ..+|.++|||++|+|+++|+++++
T Consensus         2 ~MkAv~~~~~G~p~~l~~~~~~~~P~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~~~~~p~i~G~e~~G~V~~vG~~v~~   81 (150)
T d1yb5a1           2 LMRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIEAVGDNASA   81 (150)
T ss_dssp             EEEEEEESSCSSGGGEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCSSCCCCSSBCCCSCEEEEEEEECTTCTT
T ss_pred             ceeEEEEEccCCcceEEEEeecCCCCCCCCeEEEEEEEecCcccchhhhcCCcCccccccccCccceeeeeEeecceeec
Confidence            5899999998877  7775 68999999999999999999999999999887654 467899999999999999999999


Q ss_pred             CCCCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhc
Q 018529           86 LEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVA  165 (354)
Q Consensus        86 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~  165 (354)
                      |++||||++.+                      ...|+||||+.++++.++++|+++++++||+++++..|+|+++...+
T Consensus        82 ~~vGdrV~~~~----------------------~~~G~~ae~~~v~~~~~~~iP~~ls~~~Aa~~~~~~~ta~~~~~~~g  139 (150)
T d1yb5a1          82 FKKGDRVFTSS----------------------TISGGYAEYALAADHTVYKLPEKLKPVIGSQYPLEKVAEAHENIIHG  139 (150)
T ss_dssp             CCTTCEEEESC----------------------CSSCSSBSEEEEEGGGEEECCTTCCCCEEEEEEGGGHHHHHHHHHHS
T ss_pred             cccCccccccc----------------------cccccccccccccccccccccCCCCHHHHHHhhhhhhhehhhheEEc
Confidence            99999998763                      23589999999999999999999999999999999999999988888


Q ss_pred             CCCCCCeEEEE
Q 018529          166 KPERGSSVAVF  176 (354)
Q Consensus       166 ~~~~~~~vlI~  176 (354)
                      ..+.|+++||+
T Consensus       140 ~~~~G~~vliL  150 (150)
T d1yb5a1         140 SGATGKMILLL  150 (150)
T ss_dssp             SCCSSEEEEEC
T ss_pred             CcccCCEEEEC
Confidence            99999999984

>d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=99.97  E-value=3e-31  Score=213.90  Aligned_cols=153  Identities=24%  Similarity=0.308  Sum_probs=124.9

Q ss_pred             cceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 018529           11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD   90 (354)
Q Consensus        11 ~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd   90 (354)
                      |||+..+++++||++.+++.|+|++|||||||.++|||++|++.+.|......+|+++|||++|+|+++|++++++++||
T Consensus         1 m~a~~~~~~~~pl~i~ev~~P~pg~geVlVkv~a~gic~sDl~~~~g~~~~~~~P~i~GhE~~G~V~~vG~~V~~~~vGd   80 (179)
T d1uufa1           1 IKAVGAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVPGHEIVGRVVAVGDQVEKYAPGD   80 (179)
T ss_dssp             CEEEEBSSTTSCCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHCTTSCCCSSBCCCCCEEEEEEEECTTCCSCCTTC
T ss_pred             CeEEEEccCCCCCEEEEecCCCCCCCEEEEEEEEECCCCCcceeeeeeeccccccccccccccccchhhccccccCCCCC
Confidence            89999999999999999999999999999999999999999999999877778899999999999999999999999999


Q ss_pred             EEEecc-cCCCCCCcccccCCCC-CCc-----------ccccccccceeeEEeeccceEECCCCCCccchhhcccchhhh
Q 018529           91 HVLPVF-TGECGDCRHCRFSING-EPV-----------NHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTG  157 (354)
Q Consensus        91 ~V~~~~-~~~~~~c~~c~~~~~~-~~~-----------~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a  157 (354)
                      +|.+.+ ...|++|.+|+.+... |..           ......|+|+||+.+|+++++++|+......   +..++.++
T Consensus        81 rV~v~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~GgfaEy~~v~~~~~~~ip~~~~~~~---~a~~l~~a  157 (179)
T d1uufa1          81 LVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRVADIEMI---RADQINEA  157 (179)
T ss_dssp             EEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCSSTTSBCCCSSBSEEEEEGGGCEECCCCCEEEE---CGGGHHHH
T ss_pred             EEEEcccccccCccccccCcccccCCCccccccccCCCCCcccccccceEEEechHHEEECCCCCcChh---HhchhHHH
Confidence            997665 4589999999765421 111           1122348999999999999999996643222   22355677


Q ss_pred             hhhhhhhcCC
Q 018529          158 LGATLNVAKP  167 (354)
Q Consensus       158 ~~~l~~~~~~  167 (354)
                      |+++ .++.+
T Consensus       158 ~~a~-~~a~v  166 (179)
T d1uufa1         158 YERM-LRGDV  166 (179)
T ss_dssp             HHHH-HTTCS
T ss_pred             HHHH-HHhCc
Confidence            7774 33444

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=99.97  E-value=3.5e-30  Score=208.02  Aligned_cols=173  Identities=32%  Similarity=0.515  Sum_probs=154.7

Q ss_pred             CCccchhhcccchhhhhhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcC
Q 018529          142 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT  221 (354)
Q Consensus       142 ~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~  221 (354)
                      +|++.|+.++|++.|||+++++.+++++|++|+|+|+|++|++++|+|+.+|+++|++++++++|+++++++|+++++++
T Consensus         1 vP~e~aapl~ca~~Ta~~a~~~~~~~~~g~~VlI~G~G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~~~Ga~~~i~~   80 (174)
T d1f8fa2           1 VPIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINS   80 (174)
T ss_dssp             SCGGGTGGGGTHHHHHHHHHHTTTCCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEEET
T ss_pred             CCHHHHHHHhhHHHHHHHHHHHhhCCCCCCEEEEeCCCHHHhhhhhcccccccceeeeeccHHHHHHHHHHcCCeEEEeC
Confidence            46788999999999999999899999999999999999999999999999999888899999999999999999999999


Q ss_pred             CCCChhHHHHHHHHcCCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhh-ccccEEEEEeccCC
Q 018529          222 SEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFFGNY  300 (354)
Q Consensus       222 ~~~~~~~~~~i~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~  300 (354)
                      ++.+  +.+++++++++++|+||||+|+++.++.+++.++++ |+++++|.........++...+ .+++++.|++++.+
T Consensus        81 ~~~~--~~~~i~~~t~gg~D~vid~~G~~~~~~~~~~~~~~~-G~i~~~G~~~~~~~~~~~~~~~~~k~~~i~Gs~~g~~  157 (174)
T d1f8fa2          81 KTQD--PVAAIKEITDGGVNFALESTGSPEILKQGVDALGIL-GKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVEGSG  157 (174)
T ss_dssp             TTSC--HHHHHHHHTTSCEEEEEECSCCHHHHHHHHHTEEEE-EEEEECCCCSTTCCCCCCHHHHHHTTCEEEECSGGGS
T ss_pred             CCcC--HHHHHHHHcCCCCcEEEEcCCcHHHHHHHHhcccCc-eEEEEEeecCCCcccccCHHHHHHCCCEEEEEEecCC
Confidence            8766  999999999889999999999989999999999997 9999999765444455555444 49999999988777


Q ss_pred             CCCCCHHHHHHHHHccC
Q 018529          301 KPRTDLPSVVDMYMNKQ  317 (354)
Q Consensus       301 ~~~~~~~~~~~~~~~~~  317 (354)
                      ..+++++++++++++|+
T Consensus       158 ~~~~~~~~~~~l~~~Gk  174 (174)
T d1f8fa2         158 SPKKFIPELVRLYQQGK  174 (174)
T ss_dssp             CHHHHHHHHHHHHHTTS
T ss_pred             ChHHHHHHHHHHHHcCC
Confidence            66678899999999885

>d1qora1 b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=99.97  E-value=7.5e-30  Score=199.86  Aligned_cols=141  Identities=22%  Similarity=0.291  Sum_probs=123.7

Q ss_pred             ceeeeccCCCc--eEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 018529           12 KAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG   89 (354)
Q Consensus        12 ~a~~~~~~~~~--l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~G   89 (354)
                      +.+.+.++|.|  |++++.+.|.|++|||+|||.|+++|++|++++.|..+...+|.++|||++|+|+++|+++++|++|
T Consensus         2 ~~i~~~~~G~pe~l~~~e~~~P~p~~~eVlVkv~a~~in~~D~~~~~G~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~vG   81 (147)
T d1qora1           2 TRIEFHKHGGPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPPPSLPSGLGTEAAGIVSKVGSGVKHIKAG   81 (147)
T ss_dssp             EEEEBSSCCSGGGCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSCCSSSSBCCCSCEEEEEEEECTTCCSCCTT
T ss_pred             eEEEEcccCCCceeEEEEecCCCCCCCEEEEEEEEecccceeeeeecCCCCCCcceeeeccccccceeeeeeeccccccc
Confidence            45778888887  9999999999999999999999999999999999988777889999999999999999999999999


Q ss_pred             CEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhh--cccchhhhhhhhhhhcCC
Q 018529           90 DHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCI--LSCGVSTGLGATLNVAKP  167 (354)
Q Consensus        90 d~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~--l~~~~~~a~~~l~~~~~~  167 (354)
                      |||+..                      ....|+|+||+.++.+.++++|+++++++|++  +++...++++++.+ .++
T Consensus        82 drV~~~----------------------~~~~G~~ae~~~v~~~~~~~~P~~~~~~~a~a~~~~~~~~~~~~~l~~-~~~  138 (147)
T d1qora1          82 DRVVYA----------------------QSALGAYSSVHNIIADKAAILPAAIKVDVAEQQKYPLKDAQRAHEILE-SRA  138 (147)
T ss_dssp             CEEEES----------------------CCSSCCSBSEEEEEGGGEEECCTTSCCCCCGGGEEEGGGHHHHHHHHH-TTC
T ss_pred             ceeeee----------------------ccccccceeEEEEehHHeEEcCcccchHHHHHHHHHHHHHHHHHHHHH-hCC
Confidence            999743                      12458999999999999999999998876554  55666677777654 689


Q ss_pred             CCCCeEEE
Q 018529          168 ERGSSVAV  175 (354)
Q Consensus       168 ~~~~~vlI  175 (354)
                      ++|++|||
T Consensus       139 ~~G~~VLI  146 (147)
T d1qora1         139 TQGSSLLI  146 (147)
T ss_dssp             CCBCCEEE
T ss_pred             CCCCEEEe
Confidence            99999998

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=99.96  E-value=3.7e-29  Score=201.47  Aligned_cols=174  Identities=44%  Similarity=0.772  Sum_probs=151.2

Q ss_pred             CccchhhcccchhhhhhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCC
Q 018529          143 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS  222 (354)
Q Consensus       143 ~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~  222 (354)
                      ++.+||+|.|++.|+|+++.+.+++++|++|+|+|+|++|++++|+|+++|+.+|++++++++|+++++++|+++++|+.
T Consensus         1 ~P~eaa~lgCa~~Ta~~a~~~~a~~~~G~~VlV~GaGgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~lGa~~~i~~~   80 (174)
T d1p0fa2           1 APLESCLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPK   80 (174)
T ss_dssp             CCGGGGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECGG
T ss_pred             CHHHHHhhhhHHHHHHHHHHHhhCCCCCCEEEEECCCchhHHHHHHHHHcCCceeeccCChHHHHHHHHHcCCcEEEcCC
Confidence            35679999999999999988899999999999999999999999999999998999999999999999999999999987


Q ss_pred             CCChhHHHHHHHHcCCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhhccccEEEEEeccCCCC
Q 018529          223 EHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKP  302 (354)
Q Consensus       223 ~~~~~~~~~i~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~  302 (354)
                      +.+....+..+..+++++|++||++|++..++.++..+.+++|+++++|.......+++.+..+.+++++.|++++++. 
T Consensus        81 ~~d~~~~~~~~~~~~~G~d~vid~~g~~~~~~~~~~~~~~~~G~~v~vG~~~~~~~~~~~~~~~~~~~~i~Gs~~G~~~-  159 (174)
T d1p0fa2          81 DYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNERLPLDPLLLLTGRSLKGSVFGGFK-  159 (174)
T ss_dssp             GCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECCCCCTTCCEEECTHHHHTTCEEEECSGGGCC-
T ss_pred             CchhHHHHHHHHhcCCCCcEEEEcCCCchHHHHHHHHHHHhcCceEEEEEecCccccccCHHHHhCCCEEEEEEeCCCC-
Confidence            7664455556666666999999999998899999998866348999999877677777776666788999999887654 


Q ss_pred             CCCHHHHHHHHHccC
Q 018529          303 RTDLPSVVDMYMNKQ  317 (354)
Q Consensus       303 ~~~~~~~~~~~~~~~  317 (354)
                      .+++.++++++.+||
T Consensus       160 ~~d~~~lidl~~~gK  174 (174)
T d1p0fa2         160 GEEVSRLVDDYMKKK  174 (174)
T ss_dssp             GGGHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHHcCC
Confidence            348999999999875

>d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.96  E-value=6.6e-30  Score=194.86  Aligned_cols=130  Identities=22%  Similarity=0.201  Sum_probs=118.4

Q ss_pred             cceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCC-CCCCcccccceeEEEEEeCCCCCCCCCC
Q 018529           11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLEVG   89 (354)
Q Consensus        11 ~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~~~~~~~G   89 (354)
                      |||+++.++|+++++.+++.|+|+++||+||++++|||++|++...|..+. ..+|+++|||++|+|           +|
T Consensus         1 MkA~~~~~~G~~l~~~e~~~p~p~~~eVlVkv~a~gin~~D~~~~~G~~~~~~~~P~v~G~E~~G~V-----------vG   69 (131)
T d1iz0a1           1 MKAWVLKRLGGPLELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFIPGMEVVGVV-----------EG   69 (131)
T ss_dssp             CEEEEECSTTSCEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCCEEEEEE-----------TT
T ss_pred             CcEEEEccCCCCCEEEEccCCCCCCCEEEEEEEEEeccccccccccccccccccceeEeeeeeEEee-----------cc
Confidence            899999999999999999999999999999999999999999999887655 468999999999998           39


Q ss_pred             CEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhcCCCC
Q 018529           90 DHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPER  169 (354)
Q Consensus        90 d~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~  169 (354)
                      |+|++.                       ...|+|+||+.++++.++++|+++|+++||++++++.|||+++.+++  +.
T Consensus        70 d~V~~~-----------------------~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~~~~~~~Ta~~al~~~g--~~  124 (131)
T d1iz0a1          70 RRYAAL-----------------------VPQGGLAERVAVPKGALLPLPEGRPVVGPVFPFAEAEAAFRALLDRG--HT  124 (131)
T ss_dssp             EEEEEE-----------------------CSSCCSBSEEEEEGGGCEECCTTCCCEEEEEEGGGHHHHHHHTTCTT--CC
T ss_pred             ceEEEE-----------------------eccCccceeeeeCHHHeEEccCCCCHHHHHHHHHHHHHHHHHHHhcc--cC
Confidence            999876                       24589999999999999999999999999999999999999987765  55


Q ss_pred             CCeEEEE
Q 018529          170 GSSVAVF  176 (354)
Q Consensus       170 ~~~vlI~  176 (354)
                      |++||++
T Consensus       125 g~tvl~l  131 (131)
T d1iz0a1         125 GKVVVRL  131 (131)
T ss_dssp             BEEEEEC
T ss_pred             CCEEEEC
Confidence            9999873

>d1xa0a1 b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.96  E-value=7.2e-30  Score=201.00  Aligned_cols=147  Identities=17%  Similarity=0.152  Sum_probs=126.2

Q ss_pred             hcceeeeccCCCc--eEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCC-CCCCcccccceeEEEEEeCCCCCCC
Q 018529           10 TCKAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDL   86 (354)
Q Consensus        10 ~~~a~~~~~~~~~--l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~~~~~   86 (354)
                      +|||+++.+++++  ++++++++|+|++|||||||.++|||++|+..+.|.++. ..+|+++|+|++|+|++  +.++.|
T Consensus         3 ~~KA~v~~~~~~~~~~~i~~v~~P~~~~~eVlVkV~a~gin~~D~~~~~g~~~~~~~~p~v~g~e~~G~v~~--~~~~~~   80 (152)
T d1xa0a1           3 AFQAFVVNKTETEFTAGVQTISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGKIVKTYPFVPGIDLAGVVVS--SQHPRF   80 (152)
T ss_dssp             EEEEEEEEEETTEEEEEEEEEEGGGSCSCSEEEEEEEEECCHHHHHHTSGGGSSCCSSSBCCCSEEEEEEEE--CCSSSC
T ss_pred             ceEEEEEEecCCceEEEEEEccCCCCCCCEEEEEEEEeCCChHHHHHHhhcccccccccceeeeeeeeeeec--cCCCcc
Confidence            7999999999886  568899999999999999999999999999988887654 56899999999999998  556789


Q ss_pred             CCCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhcC
Q 018529           87 EVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK  166 (354)
Q Consensus        87 ~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~~  166 (354)
                      ++||+|+.....                 ......|+||||+.+|++.++++|++++ .+||+++++..|+|.++....+
T Consensus        81 ~~g~~v~~~~~~-----------------~~~~~~G~~aEy~~v~~~~~~~iP~~l~-~~aa~l~~a~~ta~~~~~~~~~  142 (152)
T d1xa0a1          81 REGDEVIATGYE-----------------IGVTHFGGYSEYARLHGEWLVPLPKGLE-RIAQEISLAELPQALKRILRGE  142 (152)
T ss_dssp             CTTCEEEEESTT-----------------BTTTBCCSSBSEEEECGGGCEECCTTHH-HHEEEEEGGGHHHHHHHHHHTC
T ss_pred             ccCCEEEEecCc-----------------cccccCCCcceeeeehhhccccCCCCCC-HHHHHHHHHHHHHHHHHHHhcC
Confidence            999999865211                 1122458999999999999999999998 4788899999999988888888


Q ss_pred             CCCCCeEEEEc
Q 018529          167 PERGSSVAVFG  177 (354)
Q Consensus       167 ~~~~~~vlI~G  177 (354)
                      ++ |++|||+|
T Consensus       143 ~~-G~tVL~l~  152 (152)
T d1xa0a1         143 LR-GRTVVRLA  152 (152)
T ss_dssp             CC-SEEEEECC
T ss_pred             CC-CCEEEEcC
Confidence            86 99999975

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=99.96  E-value=9e-29  Score=198.81  Aligned_cols=173  Identities=44%  Similarity=0.841  Sum_probs=148.2

Q ss_pred             CccchhhcccchhhhhhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCC
Q 018529          143 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS  222 (354)
Q Consensus       143 ~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~  222 (354)
                      ++++||.++|++.|+|+++.+.+++++|++|+|+|+|++|++++|+|+.+|+.+|++++.+++|+++++++|+++++++.
T Consensus         2 ~Le~aa~l~Ca~~T~~~a~~~~a~v~~G~~VlV~G~G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~~~Ga~~~i~~~   81 (174)
T d1e3ia2           2 NLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPR   81 (174)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGG
T ss_pred             CHHHHHHhhhHHHHHHHHHHHhhCCCCCCEEEEECCChHHHHHHHHHHHhCCceeeeeccchHHHHHHHHhCCCcccCCc
Confidence            56889999999999999988899999999999999999999999999999998999999999999999999999999876


Q ss_pred             CCChhHHHHHHHHcCCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhhccccEEEEEeccCCCC
Q 018529          223 EHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKP  302 (354)
Q Consensus       223 ~~~~~~~~~i~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~  302 (354)
                      +.+....+..+...++|+|+||||+|++..++.+++++++++|+++++|......  .++...+..++++.|++.+++.+
T Consensus        82 ~~~~~~~~~~~~~~~~G~d~vie~~G~~~~~~~a~~~~~~g~G~~v~vG~~~~~~--~i~~~~~~~~k~i~Gs~~Gs~~~  159 (174)
T d1e3ia2          82 ELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVDEM--TIPTVDVILGRSINGTFFGGWKS  159 (174)
T ss_dssp             GCSSCHHHHHHHHHTSCBSEEEESSCCHHHHHHHHHTBCTTTCEEEECCCSSSEE--EEEHHHHHTTCEEEECSGGGCCH
T ss_pred             cchhhhhhhHhhhhcCCCcEEEEecccchHHHHHHHHhhcCCeEEEecCCCCCcc--ccchHHHhccCEEEEEEeeCCCh
Confidence            6554455555566666999999999999999999999998339999999875433  34444455677899999888777


Q ss_pred             CCCHHHHHHHHHccC
Q 018529          303 RTDLPSVVDMYMNKQ  317 (354)
Q Consensus       303 ~~~~~~~~~~~~~~~  317 (354)
                      ++++.++++++.+||
T Consensus       160 ~~d~p~li~l~~~GK  174 (174)
T d1e3ia2         160 VDSVPNLVSDYKNKK  174 (174)
T ss_dssp             HHHHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHHCcC
Confidence            778888999988874

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.96  E-value=3.2e-28  Score=197.24  Aligned_cols=174  Identities=49%  Similarity=0.824  Sum_probs=148.4

Q ss_pred             CccchhhcccchhhhhhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCC
Q 018529          143 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS  222 (354)
Q Consensus       143 ~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~  222 (354)
                      |+++||.++|++.|+|+++.+.+++++|++|||+|+|++|++++|+|+.+|+.+|++++++++|+++++++|+++++++.
T Consensus         2 P~e~aa~l~ca~~Tay~al~~~~~~~~G~tVlI~GaGGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~ak~lGa~~~i~~~   81 (176)
T d2fzwa2           2 PLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQ   81 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECGG
T ss_pred             CHHHHhHhhcHHHHHHHHHHHhhCCCCCCEEEEecchhHHHHHHHHHHHHhcCceEEEcccHHHHHHHHHhCCcEEEeCC
Confidence            57889999999999999988889999999999999999999999999999988999999999999999999999999997


Q ss_pred             CCChhHHHHHHHHcCCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCC-CceeecchhhhccccEEEEEeccCCC
Q 018529          223 EHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSK-DAVFMTKPINVLNERTLKGTFFGNYK  301 (354)
Q Consensus       223 ~~~~~~~~~i~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~-~~~~~~~~~~~~~~~~i~g~~~~~~~  301 (354)
                      +.++...+.++..+++++|+|||++|++..++.++.+++++ ++++.++.... ..........+.+++++.|+.++++.
T Consensus        82 ~~~~~~~~~~~~~~~~g~D~vid~~G~~~~~~~~~~~~~~g-~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~Gs~~G~~~  160 (176)
T d2fzwa2          82 DFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKG-WGVSVVVGVAASGEEIATRPFQLVTGRTWKGTAFGGWK  160 (176)
T ss_dssp             GCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTT-TCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGGGCC
T ss_pred             chhhHHHHHHHHHcCCCCcEeeecCCCHHHHHHHHHhhcCC-ceeEEEEeeccccccccccHHHHHCCCEEEEEeeeCCc
Confidence            76555777777777779999999999988899999999986 77776654432 33333344445688999999988776


Q ss_pred             CCCCHHHHHHHHHccC
Q 018529          302 PRTDLPSVVDMYMNKQ  317 (354)
Q Consensus       302 ~~~~~~~~~~~~~~~~  317 (354)
                      .++++.++++++++||
T Consensus       161 ~~~d~~~li~l~~~GK  176 (176)
T d2fzwa2         161 SVESVPKLVSEYMSKK  176 (176)
T ss_dssp             HHHHHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHHHcCC
Confidence            6678889999998885

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=99.95  E-value=3.4e-28  Score=195.66  Aligned_cols=170  Identities=30%  Similarity=0.506  Sum_probs=146.3

Q ss_pred             CCccchhhcccchhhhhhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcC
Q 018529          142 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT  221 (354)
Q Consensus       142 ~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~  221 (354)
                      +|+++|+.++++++|+|+++ +.+++++|++|+|+|+|++|++++|+|+.+|+.+|++++++++|+++++++|+++++++
T Consensus         1 ip~e~A~~l~~~~~ta~~a~-~~a~~~~g~~VlI~GaG~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~~lGa~~~i~~   79 (174)
T d1jqba2           1 MPLENAVMITDMMTTGFHGA-ELADIEMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNY   79 (174)
T ss_dssp             SCHHHHHTTTTHHHHHHHHH-HHTTCCTTCCEEEECCSHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHHHHTCSEEECG
T ss_pred             CCHHHHHHhhhHHHHHHHHH-HHhCCCCCCEEEEEcCCcchhhhhhhhhcccccccccccchhhhHHHHHhhCccccccc
Confidence            57899999999999999995 77999999999999999999999999999999889999999999999999999999999


Q ss_pred             CCCChhHHHHHHHHcCC-CccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhh---hccccEEEEEec
Q 018529          222 SEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN---VLNERTLKGTFF  297 (354)
Q Consensus       222 ~~~~~~~~~~i~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~---~~~~~~i~g~~~  297 (354)
                      ++.+  +.+.+++++++ |+|+||||+|++..++.++++++++ |+++.+|.........+....   ..+++++.++..
T Consensus        80 ~~~~--~~~~v~~~t~g~G~D~vid~~g~~~~~~~a~~~~~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~i~g~~~  156 (174)
T d1jqba2          80 KNGH--IEDQVMKLTNGKGVDRVIMAGGGSETLSQAVKMVKPG-GIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGLC  156 (174)
T ss_dssp             GGSC--HHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEE-EEEEECCCCCSSSEEEEETTTTGGGTBCCEEEEBCC
T ss_pred             cchh--HHHHHHHHhhccCcceEEEccCCHHHHHHHHHHHhcC-CEEEEEeecCCCCcCcCcHhHHHHHhCccEEEEecC
Confidence            8766  88999999988 9999999999988999999999997 999999987655555544332   347788988765


Q ss_pred             cCCCCCCCHHHHHHHHHccC
Q 018529          298 GNYKPRTDLPSVVDMYMNKQ  317 (354)
Q Consensus       298 ~~~~~~~~~~~~~~~~~~~~  317 (354)
                      +.++  ..++++++++..|+
T Consensus       157 ~~~r--~~~e~l~~li~~gk  174 (174)
T d1jqba2         157 PGGR--LRAERLRDMVVYNR  174 (174)
T ss_dssp             CCHH--HHHHHHHHHHHTTS
T ss_pred             CCCc--ccHHHHHHHHHcCC
Confidence            4432  24567778887764

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=3.8e-28  Score=196.17  Aligned_cols=166  Identities=21%  Similarity=0.290  Sum_probs=143.4

Q ss_pred             CCccchhhcccchhhhhhhhhhhcCCCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEc
Q 018529          142 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN  220 (354)
Q Consensus       142 ~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~  220 (354)
                      +|+++||+++++++|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++.++++++|+++++|
T Consensus         1 ls~~~AA~l~~~~~TA~~al~~~~~~~~g~~VlV~Ga~G~vG~~aiq~a~~~G~-~vi~~~~~~~~~~~~~~~Ga~~vi~   79 (174)
T d1yb5a2           1 LDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGL-KILGTAGTEEGQKIVLQNGAHEVFN   79 (174)
T ss_dssp             SCHHHHTTTHHHHHHHHHHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSEEEE
T ss_pred             CCHHHHHHhHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccccccCc-ccccccccccccccccccCcccccc
Confidence            5899999999999999999988899999999999996 9999999999999999 8999989999999999999999999


Q ss_pred             CCCCChhHHHHHHHHcCC-CccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhh-hccccEEEEEecc
Q 018529          221 TSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFG  298 (354)
Q Consensus       221 ~~~~~~~~~~~i~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~  298 (354)
                      +++.+  +.+.+++.+++ ++|+|||++|+ +.++.++++++++ |+++.+|... ..  ++++.. +.+++++.|++++
T Consensus        80 ~~~~~--~~~~i~~~t~~~g~d~v~d~~g~-~~~~~~~~~l~~~-G~iv~~G~~~-~~--~~~~~~~~~k~~~i~g~~~~  152 (174)
T d1yb5a2          80 HREVN--YIDKIKKYVGEKGIDIIIEMLAN-VNLSKDLSLLSHG-GRVIVVGSRG-TI--EINPRDTMAKESSIIGVTLF  152 (174)
T ss_dssp             TTSTT--HHHHHHHHHCTTCEEEEEESCHH-HHHHHHHHHEEEE-EEEEECCCCS-CE--EECTHHHHTTTCEEEECCGG
T ss_pred             ccccc--HHHHhhhhhccCCceEEeecccH-HHHHHHHhccCCC-CEEEEEecCC-CC--CCCHHHHHHCCCEEEEEEec
Confidence            98876  99999999988 99999999997 7899999999997 9999998754 22  333333 4589999998765


Q ss_pred             CCCCCCCHHHHHHHHHcc
Q 018529          299 NYKPRTDLPSVVDMYMNK  316 (354)
Q Consensus       299 ~~~~~~~~~~~~~~~~~~  316 (354)
                      .. ..+++++++++++++
T Consensus       153 ~~-~~~~~~~~~~~l~~g  169 (174)
T d1yb5a2         153 SS-TKEEFQQYAAALQAG  169 (174)
T ss_dssp             GC-CHHHHHHHHHHHHHH
T ss_pred             CC-CHHHHHHHHHHHHHH
Confidence            43 235677777777654

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.95  E-value=7.3e-28  Score=194.07  Aligned_cols=173  Identities=37%  Similarity=0.701  Sum_probs=148.8

Q ss_pred             CCccchhhcccchhhhhhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcC
Q 018529          142 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT  221 (354)
Q Consensus       142 ~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~  221 (354)
                      .|+++||.++|++.|+|+++.+.+++++|++|+|+|+|++|++++|+|+.+|+.+|++++.+++|+++++++|+++++|+
T Consensus         2 ~P~e~aa~l~Ca~~T~~~Av~~~~~~~~g~tVlI~G~GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~~GA~~~in~   81 (176)
T d1d1ta2           2 APPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECISP   81 (176)
T ss_dssp             SCHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHHTCSEEECG
T ss_pred             cCHHHHHhhhhHHHHHHHHHHHhhCCCCCCEEEEECCCchhHHHHHHHHHcCCceEEEecCcHHHHHHHHhcCCcEEECc
Confidence            35889999999999999998888999999999999999999999999999998899999999999999999999999998


Q ss_pred             CCCChhHHHHHHHHcCC-CccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhhccccEEEEEeccCC
Q 018529          222 SEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNY  300 (354)
Q Consensus       222 ~~~~~~~~~~i~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~  300 (354)
                      .+.+. ..+.+.+.+.+ |+|++||++|++..+..++..+..++|+++++|.........+.+..++++++++|+++++.
T Consensus        82 ~~~~~-~~~~~~~~~~g~G~d~vi~~~g~~~~~~~a~~~~~~~~G~~v~vG~~~~~~~~~~~~~~~~~~~~i~Gs~~G~~  160 (176)
T d1d1ta2          82 KDSTK-PISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSAKMLTYDPMLLFTGRTWKGCVFGGL  160 (176)
T ss_dssp             GGCSS-CHHHHHHHHHTSCCCEEEECSCCHHHHHHHHTTSCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGGGC
T ss_pred             cccch-HHHHHHHHhccccceEEEEeCCchHHHHHHHHHhhcCCeEEEEEEccccccccCCCHHHHhCCCEEEEEEEeCC
Confidence            76553 34555565555 99999999999888888888776544999999988766666776666778899999998887


Q ss_pred             CCCCCHHHHHHHHHc
Q 018529          301 KPRTDLPSVVDMYMN  315 (354)
Q Consensus       301 ~~~~~~~~~~~~~~~  315 (354)
                      .+++|+.++++++.+
T Consensus       161 ~~~~dip~li~~~~~  175 (176)
T d1d1ta2         161 KSRDDVPKLVTEFLA  175 (176)
T ss_dssp             CHHHHHHHHHHHHTT
T ss_pred             CcHHHHHHHHHHHhC
Confidence            777788888887654

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=99.95  E-value=1.3e-27  Score=193.34  Aligned_cols=175  Identities=46%  Similarity=0.873  Sum_probs=147.3

Q ss_pred             CccchhhcccchhhhhhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCC
Q 018529          143 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS  222 (354)
Q Consensus       143 ~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~  222 (354)
                      |+++||.++|++.|+|+++++.+++++||+|||+|+|++|.+++++++..|+.+|++++++++|+++++++|+++++++.
T Consensus         2 Ple~aa~l~ca~~Tay~al~~~~~vk~GdtVlV~GaGG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~~Ga~~~i~~~   81 (176)
T d2jhfa2           2 PLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQ   81 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGG
T ss_pred             CHHHHhHhhcHHHHHHHHHHHhhCCCCCCEEEEECCCCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHHhCCeeEEecC
Confidence            57889999999999999998999999999999999999999999999999988999999999999999999999999887


Q ss_pred             CCChhHHHHHHHHcCCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhhccccEEEEEeccCCCC
Q 018529          223 EHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKP  302 (354)
Q Consensus       223 ~~~~~~~~~i~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~  302 (354)
                      +.++...+.++...++++|++||++|.+..++.++..+..++|.++..+..............+.+++++.|+++++..+
T Consensus        82 ~~~~~~~~~~~~~~~~G~D~vid~~G~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~Gs~~G~~~~  161 (176)
T d2jhfa2          82 DYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGAIFGGFKS  161 (176)
T ss_dssp             GCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHHBCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGGGCCH
T ss_pred             CchhHHHHHHHHHhcCCCCEEEecCCchhHHHHHHHHHhcCCcceEEecCCCCcccccccHHHHhCCCEEEEEEEeCCCH
Confidence            65544555566666669999999999988999999999886345555555444444444455566999999999887777


Q ss_pred             CCCHHHHHHHHHccC
Q 018529          303 RTDLPSVVDMYMNKQ  317 (354)
Q Consensus       303 ~~~~~~~~~~~~~~~  317 (354)
                      ++++.++++++.+||
T Consensus       162 ~~~~~~li~~~~~GK  176 (176)
T d2jhfa2         162 KDSVPKLVADFMAKK  176 (176)
T ss_dssp             HHHHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHHCcC
Confidence            778999999998875

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=99.95  E-value=9.8e-28  Score=195.17  Aligned_cols=170  Identities=25%  Similarity=0.359  Sum_probs=146.1

Q ss_pred             CccchhhcccchhhhhhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCC
Q 018529          143 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS  222 (354)
Q Consensus       143 ~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~  222 (354)
                      +++.+|.+.|+++|||+++.+..++++|++|||+|+|++|++++|+|+++|+++|++++++++|+++++++|+++++++.
T Consensus         2 d~~~~a~~~c~~~ta~~al~~~~~~~~G~~VlV~GaG~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~   81 (182)
T d1vj0a2           2 DLDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNRR   81 (182)
T ss_dssp             CHHHHHHHTTHHHHHHHHHHTCSSCCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCSEEEETT
T ss_pred             cHHHHHHhhcHHHHHHHHHHHHhCCCCCCEEEEECCCccchhheecccccccccccccccccccccccccccceEEEecc
Confidence            34668889999999999988888999999999999999999999999999988899999999999999999999999998


Q ss_pred             CCC-hhHHHHHHHHcCC-CccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhh--hccccEEEEEecc
Q 018529          223 EHD-RPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN--VLNERTLKGTFFG  298 (354)
Q Consensus       223 ~~~-~~~~~~i~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~--~~~~~~i~g~~~~  298 (354)
                      +.+ .+..+.+++.+++ |+|+||||+|++..++.++++++++ |+++++|...+....++....  +.|++++.|++.+
T Consensus        82 ~~~~~~~~~~i~~~~~~~g~Dvvid~vG~~~~~~~a~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~l~~k~l~i~G~~~~  160 (182)
T d1vj0a2          82 ETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRG-GFYSVAGVAVPQDPVPFKVYEWLVLKNATFKGIWVS  160 (182)
T ss_dssp             TSCHHHHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEE-EEEEECCCCSCCCCEEECHHHHTTTTTCEEEECCCC
T ss_pred             ccchHHHHHHHHHhhCCCCceEEeecCCchhHHHHHHHHhcCC-CEEEEEeecCCCCccccccHHHHHHCCcEEEEEEeC
Confidence            876 3455668888888 9999999999988899999999997 999999976655555555432  4589999998764


Q ss_pred             CCCCCCCHHHHHHHHHcc
Q 018529          299 NYKPRTDLPSVVDMYMNK  316 (354)
Q Consensus       299 ~~~~~~~~~~~~~~~~~~  316 (354)
                      +.   .+++++++++.++
T Consensus       161 ~~---~~~~~~~~~i~~~  175 (182)
T d1vj0a2         161 DT---SHFVKTVSITSRN  175 (182)
T ss_dssp             CH---HHHHHHHHHHHTC
T ss_pred             CH---HHHHHHHHHHHHC
Confidence            32   5688888888765

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.95  E-value=3.3e-28  Score=198.41  Aligned_cols=173  Identities=20%  Similarity=0.240  Sum_probs=146.9

Q ss_pred             cchhhcccchhhhhhhhhhhcCCCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCC
Q 018529          145 DKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE  223 (354)
Q Consensus       145 ~~aa~l~~~~~~a~~~l~~~~~~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~  223 (354)
                      +|||+++++++|||+++++.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++.++++++|+++++++++
T Consensus         1 eeAA~l~~~~~TA~~al~~~~~~~~g~~VlI~ga~g~vG~~~iqla~~~g~-~vi~~~~~~~~~~~l~~~Ga~~vi~~~~   79 (183)
T d1pqwa_           1 NEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGA-RIYTTAGSDAKREMLSRLGVEYVGDSRS   79 (183)
T ss_dssp             CHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHTTCCSEEEETTC
T ss_pred             CchhhhhHHHHHHHHHHHHHhCCCCCCEEEEECCCCCcccccchhhccccc-cceeeecccccccccccccccccccCCc
Confidence            5899999999999999999999999999999986 9999999999999999 8888889999999999999999999887


Q ss_pred             CChhHHHHHHHHcCC-CccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhhccccEEEEEeccCCC-
Q 018529          224 HDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYK-  301 (354)
Q Consensus       224 ~~~~~~~~i~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~-  301 (354)
                      .+  +.+++++.+++ ++|++||++|+ +.++.++++++++ |+++.+|..............+.+++++.++...... 
T Consensus        80 ~~--~~~~v~~~t~~~g~d~v~d~~g~-~~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (183)
T d1pqwa_          80 VD--FADEILELTDGYGVDVVLNSLAG-EAIQRGVQILAPG-GRFIELGKKDVYADASLGLAALAKSASFSVVDLDLNLK  155 (183)
T ss_dssp             ST--HHHHHHHHTTTCCEEEEEECCCT-HHHHHHHHTEEEE-EEEEECSCGGGTTTCEEEGGGGTTTCEEEECCHHHHHH
T ss_pred             cC--HHHHHHHHhCCCCEEEEEecccc-hHHHHHHHHhcCC-CEEEEEccCCCCCCcccchHHHhCCcEEEEEEccceec
Confidence            76  99999999988 99999999998 7899999999997 9999998765333333344445688888887643221 


Q ss_pred             -----CCCCHHHHHHHHHccCCCCCC
Q 018529          302 -----PRTDLPSVVDMYMNKQLELEK  322 (354)
Q Consensus       302 -----~~~~~~~~~~~~~~~~~~~~~  322 (354)
                           .++.++++++++++|++++.|
T Consensus       156 ~~~~~~~~~~~~v~~~i~~G~i~p~P  181 (183)
T d1pqwa_         156 LQPARYRQLLQHILQHVADGKLEVLP  181 (183)
T ss_dssp             HCHHHHHHHHHHHHHHHHTTSSCCCC
T ss_pred             cCHHHHHHHHHHHHHHHHCCCCceeC
Confidence                 124578888999999887754

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=99.94  E-value=2.2e-27  Score=191.04  Aligned_cols=168  Identities=23%  Similarity=0.311  Sum_probs=147.3

Q ss_pred             CCccchhhcccchhhhhhhhhhhcCCCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEc
Q 018529          142 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN  220 (354)
Q Consensus       142 ~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~  220 (354)
                      +|+.+||.++|++.|||+++ ++.+++++++|+|+|+ |++|++++|+++..|..+|++++++++|+++++++|++++++
T Consensus         1 l~~~eAA~l~c~~~Ta~~al-~~~~~~~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~~Ga~~~i~   79 (170)
T d1jvba2           1 LNAVEAAPLTCSGITTYRAV-RKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVIN   79 (170)
T ss_dssp             SCHHHHGGGGTHHHHHHHHH-HHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCSEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHHcCCceeec
Confidence            57899999999999999995 6789999999999996 999999999999999879999999999999999999999999


Q ss_pred             CCCCChhHHHHHHHHcCC-CccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhhccccEEEEEeccC
Q 018529          221 TSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGN  299 (354)
Q Consensus       221 ~~~~~~~~~~~i~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~  299 (354)
                      +.+.+  +.+.+++.+.+ ++|++|||+|++..++.++++++++ |+++++|....+..++... .+.+++++.|++.++
T Consensus        80 ~~~~~--~~~~~~~~~~~~~~d~vid~~g~~~~~~~a~~~l~~~-G~iv~~G~~~~~~~~~~~~-~~~k~i~i~Gs~~~~  155 (170)
T d1jvba2          80 ASMQD--PLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQ-GKYVMVGLFGADLHYHAPL-ITLSEIQFVGSLVGN  155 (170)
T ss_dssp             TTTSC--HHHHHHHHTTTSCEEEEEESCCCHHHHTTGGGGEEEE-EEEEECCSSCCCCCCCHHH-HHHHTCEEEECCSCC
T ss_pred             cCCcC--HHHHHHHHhhcccchhhhcccccchHHHhhhhhcccC-CEEEEeccccCccccCHHH-HHhCCcEEEEEecCC
Confidence            88766  88888888877 8999999999988999999999997 9999999876544444333 245999999988654


Q ss_pred             CCCCCCHHHHHHHHHccC
Q 018529          300 YKPRTDLPSVVDMYMNKQ  317 (354)
Q Consensus       300 ~~~~~~~~~~~~~~~~~~  317 (354)
                      +   ++++++++++++||
T Consensus       156 ~---~d~~~~l~lv~~GK  170 (170)
T d1jvba2         156 Q---SDFLGIMRLAEAGK  170 (170)
T ss_dssp             H---HHHHHHHHHHHTTS
T ss_pred             H---HHHHHHHHHHHcCC
Confidence            3   67999999999885

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1.4e-26  Score=186.33  Aligned_cols=170  Identities=22%  Similarity=0.353  Sum_probs=141.1

Q ss_pred             CCccchhhcccchhhhhhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcC
Q 018529          142 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT  221 (354)
Q Consensus       142 ~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~  221 (354)
                      +|+++||.+. ++++||+++ +++++++|++|+|+|+|++|++++|+|+.+|+.+|++++++++|+++++++|+++++++
T Consensus         1 vS~e~Aal~e-pla~a~~a~-~~~~~~~gd~VlI~G~G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~~~Ga~~~~~~   78 (171)
T d1pl8a2           1 VTFEEGALIE-PLSVGIHAC-RRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQI   78 (171)
T ss_dssp             SCHHHHHHHH-HHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEEC
T ss_pred             CCHHHHHHHH-HHHHHHHHH-HHhCCCCCCEEEEECCCccHHHHHHHHHHcCCceEEeccCCHHHHHHHHHhCCcccccc
Confidence            5788888764 888999994 77899999999999999999999999999999899999999999999999999999998


Q ss_pred             CCCChh-HHHHHHHHcCCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhhccccEEEEEeccCC
Q 018529          222 SEHDRP-IQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNY  300 (354)
Q Consensus       222 ~~~~~~-~~~~i~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~  300 (354)
                      .+.+.. ..+.+....++++|+||||+|++..++.++++++++ |+++++|.......+++... +.|++++.|++.   
T Consensus        79 ~~~~~~~~~~~~~~~~g~g~Dvvid~~G~~~~~~~a~~~~~~g-G~iv~~G~~~~~~~~~~~~~-~~k~l~i~Gs~~---  153 (171)
T d1pl8a2          79 SKESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSG-GTLVLVGLGSEMTTVPLLHA-AIREVDIKGVFR---  153 (171)
T ss_dssp             SSCCHHHHHHHHHHHHTSCCSEEEECSCCHHHHHHHHHHSCTT-CEEEECSCCCSCCCCCHHHH-HHTTCEEEECCS---
T ss_pred             cccccccccccccccCCCCceEEEeccCCchhHHHHHHHhcCC-CEEEEEecCCCCCccCHHHH-HHCCcEEEEEeC---
Confidence            887622 223333333448999999999988999999999997 99999998765444443322 459999999863   


Q ss_pred             CCCCCHHHHHHHHHccCCC
Q 018529          301 KPRTDLPSVVDMYMNKQLE  319 (354)
Q Consensus       301 ~~~~~~~~~~~~~~~~~~~  319 (354)
                       +.++++++++++.+|+++
T Consensus       154 -~~~~~~~al~li~~gkid  171 (171)
T d1pl8a2         154 -YCNTWPVAISMLASKSVN  171 (171)
T ss_dssp             -CSSCHHHHHHHHHTTSCC
T ss_pred             -CHhHHHHHHHHHHcCCCC
Confidence             235899999999999764

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=99.94  E-value=1.1e-26  Score=187.80  Aligned_cols=174  Identities=53%  Similarity=0.924  Sum_probs=143.2

Q ss_pred             CccchhhcccchhhhhhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCC
Q 018529          143 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS  222 (354)
Q Consensus       143 ~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~  222 (354)
                      |+++||.++|++.|+|+++.+.+++++|++|+|+|+|++|.+++++++..|..+|++++++++|+++++++|+++++|+.
T Consensus         2 P~e~aa~l~ca~~Tay~a~~~~a~~k~g~~VlI~G~Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~~GAd~~in~~   81 (175)
T d1cdoa2           2 PLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPN   81 (175)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECGG
T ss_pred             CHHHHHHhhcHHHHHHHHHHHhhCCCCCCEEEEEecCCccchHHHHHHHHhhchheeecchHHHHHHHHHcCCcEEEcCC
Confidence            57899999999999999988899999999999999999999999999999998999999999999999999999999987


Q ss_pred             CCChhHHHHHHHHcCCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhhccccEEEEEeccCCCC
Q 018529          223 EHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKP  302 (354)
Q Consensus       223 ~~~~~~~~~i~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~  302 (354)
                      +.+....+..+...++++|++||++|+...++.++.++.+++++++..+... ..........+.+++++.|++.+++.+
T Consensus        82 ~~~~~~~~~~~~~~~~G~d~vid~~G~~~~~~~a~~~~~~g~~~~~~~g~~~-~~~~~~~~~~~~~~~~i~Gs~~G~~~~  160 (175)
T d1cdoa2          82 DHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTD-LHDVATRPIQLIAGRTWKGSMFGGFKG  160 (175)
T ss_dssp             GCSSCHHHHHHHHHTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCS-SSCEEECHHHHHTTCEEEECSGGGCCH
T ss_pred             CcchhHHHHHHhhccCCcceeeeecCCHHHHHHHHHHhhCCCcceeEEEecC-CcccCccHHHHHCCcEEEEEEEeCCcH
Confidence            7653233334444445999999999998889999999877634555555544 333333344456889999999888777


Q ss_pred             CCCHHHHHHHHHccC
Q 018529          303 RTDLPSVVDMYMNKQ  317 (354)
Q Consensus       303 ~~~~~~~~~~~~~~~  317 (354)
                      ++++.++++++.+||
T Consensus       161 ~~d~~~~i~l~~~gK  175 (175)
T d1cdoa2         161 KDGVPKMVKAYLDKK  175 (175)
T ss_dssp             HHHHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHHcCC
Confidence            778999999999875

>d1o89a1 b.35.1.2 (A:1-115,A:293-323) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.94  E-value=1e-26  Score=180.77  Aligned_cols=131  Identities=15%  Similarity=0.112  Sum_probs=110.7

Q ss_pred             cceeeeccCCCc--eEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCC-CCCCcccccceeEEEEEeCCCCCCCC
Q 018529           11 CKAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLE   87 (354)
Q Consensus        11 ~~a~~~~~~~~~--l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~~~~~~   87 (354)
                      |||+++.+++++  +++++++.|+|++|||+|||.|+|||++|+....|.++. ..+|+++|+|++|+|+++|.  ..++
T Consensus         1 MkA~v~~~~~~~~~l~i~~v~~p~~~~geVlVkV~a~gin~~D~~~~~G~~~~~~~~p~v~G~e~~G~V~~~~~--~~~~   78 (146)
T d1o89a1           1 LQALLLEQQDGKTLASVQTLDESRLPEGDVTVDVHWSSLNYKDALAITGKGKIIRNFPMIPGIDFAGTVRTSED--PRFH   78 (146)
T ss_dssp             CEEEEEECC---CEEEEEECCGGGSCSCSEEEEEEEEECCHHHHHHHHTCSSCCCSSSBCCCSEEEEEEEEECS--TTCC
T ss_pred             CeEEEEEcCCCceEEEEEEcCCCCCCCCEEEEEEeeccCccceeeEEEeecccccccceeccccccccceeecc--CCcc
Confidence            899999999887  788999999999999999999999999999998887654 46899999999999999766  4799


Q ss_pred             CCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhh
Q 018529           88 VGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGA  160 (354)
Q Consensus        88 ~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~  160 (354)
                      +||+|.+...                 ..+....|+||||+.+|++.++++|+++|+++||++++++.||+.+
T Consensus        79 ~g~~v~~~~~-----------------~~g~~~~G~~Aey~~v~~~~vv~lP~~ls~~eAA~l~~a~~tA~~~  134 (146)
T d1o89a1          79 AGQEVLLTGW-----------------GVGENHWGGLAEQARVKGDWLVAMPQGQAAKEISLSEAPNFAEAII  134 (146)
T ss_dssp             TTCEEEEECT-----------------TBTTTBCCSSBSEEEECGGGCEECCTTSCCEEECGGGHHHHHHHHH
T ss_pred             ceeeEEeecc-----------------cceecCCCcceeeeeeeeeeEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence            9999986521                 0122345899999999999999999999999999999888787544

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.94  E-value=1.6e-26  Score=185.19  Aligned_cols=164  Identities=24%  Similarity=0.353  Sum_probs=141.0

Q ss_pred             CCccchhhcccchhhhhhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcC
Q 018529          142 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT  221 (354)
Q Consensus       142 ~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~  221 (354)
                      +|+++||.++|+++|||+++ +++++++|++|+|+|+|++|++++|+||.+|+ +|++++++++|+++++++|+++++++
T Consensus         1 v~f~~aA~l~ca~~Ta~~al-~~~~~~~g~~VlV~GaG~vG~~~~~~ak~~G~-~Vi~~~~~~~~~~~a~~~Ga~~~i~~   78 (166)
T d1llua2           1 VEFAEIAPILCAGVTVYKGL-KQTNARPGQWVAISGIGGLGHVAVQYARAMGL-HVAAIDIDDAKLELARKLGASLTVNA   78 (166)
T ss_dssp             SCHHHHGGGGTHHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTCSEEEET
T ss_pred             CCHHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEeeccccHHHHHHHHHHcCC-ccceecchhhHHHhhhccCccccccc
Confidence            57899999999999999996 66899999999999999999999999999998 99999999999999999999999998


Q ss_pred             CCCChhHHHHHHHHcCCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhh-hccccEEEEEeccCC
Q 018529          222 SEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNY  300 (354)
Q Consensus       222 ~~~~~~~~~~i~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~  300 (354)
                      .+.+  +.+.+++.+. +++.+++++++++.++.++++++++ |+++.+|......  .++... +.|++++.|++.+. 
T Consensus        79 ~~~~--~~~~~~~~~~-g~~~~i~~~~~~~~~~~~~~~l~~~-G~iv~~G~~~~~~--~~~~~~~~~k~~~i~Gs~~~~-  151 (166)
T d1llua2          79 RQED--PVEAIQRDIG-GAHGVLVTAVSNSAFGQAIGMARRG-GTIALVGLPPGDF--PTPIFDVVLKGLHIAGSIVGT-  151 (166)
T ss_dssp             TTSC--HHHHHHHHHS-SEEEEEECCSCHHHHHHHHTTEEEE-EEEEECCCCSSEE--EEEHHHHHHTTCEEEECCSCC-
T ss_pred             cchh--HHHHHHHhhc-CCcccccccccchHHHHHHHHhcCC-cEEEEEEecCCCc--cCCHHHHHhCCcEEEEEeecC-
Confidence            8876  7778877665 5677777888889999999999997 9999999765433  333333 45999999987543 


Q ss_pred             CCCCCHHHHHHHHHcc
Q 018529          301 KPRTDLPSVVDMYMNK  316 (354)
Q Consensus       301 ~~~~~~~~~~~~~~~~  316 (354)
                        +++++++++++.+|
T Consensus       152 --~~d~~e~l~l~~~G  165 (166)
T d1llua2         152 --RADLQEALDFAGEG  165 (166)
T ss_dssp             --HHHHHHHHHHHHTT
T ss_pred             --HHHHHHHHHHHHCc
Confidence              35799999999887

>d1tt7a1 b.35.1.2 (A:2-127,A:295-330) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=99.94  E-value=2.5e-28  Score=194.19  Aligned_cols=152  Identities=18%  Similarity=0.173  Sum_probs=128.0

Q ss_pred             hhcceeeeccCCCc--eEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCC-CCCCcccccceeEEEEEeCCCCCC
Q 018529            9 LTCKAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSD   85 (354)
Q Consensus         9 ~~~~a~~~~~~~~~--l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~~~~   85 (354)
                      .+|||+++.+++.+  +++++++.|++++|||||||+|+|||++|++.+.|.++. ..+|.++|+|++|+|++  +.+++
T Consensus         2 ~~~ka~~~~~~g~~~~l~~~~v~~p~l~~~eVLVkV~a~gin~~D~~~~~g~~~~~~~~~~~~g~e~~G~v~~--~~~~~   79 (162)
T d1tt7a1           2 TLFQALQAEKNADDVSVHVKTISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGNIVREYPLILGIDAAGTVVS--SNDPR   79 (162)
T ss_dssp             CEEEEEEECCGGGSCCCEEEEEESSSSCSSSEEEEECCEEECHHHHHHTSTTCTTCSSCSEECCSEEEEEEEE--CSSTT
T ss_pred             CcEEEEEEEecCCCeEEEEEEcCCCCCCCCEEEEEEEEecccchhhheeeecccccccceeeeeeeccccccc--ccccc
Confidence            37999999987765  999999999999999999999999999999998887764 46789999999999998  45678


Q ss_pred             CCCCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhc
Q 018529           86 LEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVA  165 (354)
Q Consensus        86 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~  165 (354)
                      +++||+|+.....                 .+....|+|+||+.+|++.++++|+++|+++||.+++.++|||.++. ..
T Consensus        80 ~~~g~~v~~~~~~-----------------~g~~~~G~~aey~~v~~~~l~~iP~~ls~~~Aa~~~~~~~ta~~~~~-~~  141 (162)
T d1tt7a1          80 FAEGDEVIATSYE-----------------LGVSRDGGLSEYASVPGDWLVPLPQNLSLKEAMVDQLLTIVDREVSL-EE  141 (162)
T ss_dssp             CCTTCEEEEESTT-----------------BTTTBCCSSBSSEEECGGGEEECCTTCCHHHHHHSCSTTSEEEEECS-TT
T ss_pred             cccceeeEeeecc-----------------ceeccccccceEEEecHHHEEECCCCCCHHHHHHHHHHHHHHHHHHH-hc
Confidence            9999999865321                 12234589999999999999999999999999999999999998753 34


Q ss_pred             CCCCCCeEEEEcC-Ch
Q 018529          166 KPERGSSVAVFGL-GA  180 (354)
Q Consensus       166 ~~~~~~~vlI~G~-g~  180 (354)
                      .+..+++|||+|+ |.
T Consensus       142 ~~~~~~~Vli~ga~G~  157 (162)
T d1tt7a1         142 TPGALKDILQNRIQGR  157 (162)
T ss_dssp             HHHHHHHTTTTCCSSE
T ss_pred             CCCCCCEEEEECCcce
Confidence            4566678888876 53

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=99.94  E-value=1e-25  Score=181.22  Aligned_cols=166  Identities=25%  Similarity=0.374  Sum_probs=137.3

Q ss_pred             CCccchhhcccchhhhhhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcC
Q 018529          142 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT  221 (354)
Q Consensus       142 ~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~  221 (354)
                      +|+++||.+. ++++||+++ +++++++|++|+|+|+|++|++++|+|+.+|+ +|++++++++|+++++++|++..+++
T Consensus         1 VS~e~Aal~e-Pla~a~~a~-~~~~~~~g~~vlV~G~G~vG~~~~~~ak~~Ga-~vi~v~~~~~r~~~a~~~ga~~~~~~   77 (170)
T d1e3ja2           1 VSLEEGALLE-PLSVGVHAC-RRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGA-FVVCTARSPRRLEVAKNCGADVTLVV   77 (170)
T ss_dssp             SCHHHHHTHH-HHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTCSEEEEC
T ss_pred             CCHHHHHHHH-HHHHHHHHH-HHhCCCCCCEEEEEcccccchhhHhhHhhhcc-cccccchHHHHHHHHHHcCCcEEEec
Confidence            5788888764 788999995 77899999999999999999999999999999 89999999999999999999887766


Q ss_pred             CCCCh---hHHHHHHHHcCCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhh-hccccEEEEEec
Q 018529          222 SEHDR---PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFF  297 (354)
Q Consensus       222 ~~~~~---~~~~~i~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~  297 (354)
                      +....   +..+.+++..++++|+||||+|++..++.++++++++ |+++++|......  .++... +.|++++.|++.
T Consensus        78 ~~~~~~~~~~~~~~~~~~g~g~D~vid~~g~~~~~~~a~~~~~~~-G~iv~~G~~~~~~--~~~~~~~~~k~i~i~gs~~  154 (170)
T d1e3ja2          78 DPAKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTG-GTLMLVGMGSQMV--TVPLVNACAREIDIKSVFR  154 (170)
T ss_dssp             CTTTSCHHHHHHHHHHHSSSCCSEEEECSCCHHHHHHHHHHSCTT-CEEEECSCCSSCC--CCCHHHHHTTTCEEEECCS
T ss_pred             cccccccchhhhhhhcccccCCceeeecCCChHHHHHHHHHHhcC-CceEEEecCCCCC--CcCHHHHHHCCCEEEEEEC
Confidence            55432   3444555555559999999999988999999999997 9999999876433  333333 449999999753


Q ss_pred             cCCCCCCCHHHHHHHHHccC
Q 018529          298 GNYKPRTDLPSVVDMYMNKQ  317 (354)
Q Consensus       298 ~~~~~~~~~~~~~~~~~~~~  317 (354)
                          +.++++++++++++||
T Consensus       155 ----~~~~~~~ai~li~~Gk  170 (170)
T d1e3ja2         155 ----YCNDYPIALEMVASGR  170 (170)
T ss_dssp             ----CSSCHHHHHHHHHTTS
T ss_pred             ----CHHHHHHHHHHHHcCC
Confidence                2358999999999885

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=99.94  E-value=2.1e-26  Score=185.35  Aligned_cols=164  Identities=21%  Similarity=0.342  Sum_probs=140.2

Q ss_pred             ccchhhcccchhhhhhhhhhhc-CCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCC
Q 018529          144 LDKVCILSCGVSTGLGATLNVA-KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS  222 (354)
Q Consensus       144 ~~~aa~l~~~~~~a~~~l~~~~-~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~  222 (354)
                      +.++|+++|+++|||+++.+.. .+++|++|||+|+|++|++++|+|+.+|+.+|++++++++|+++++++|+++++++.
T Consensus         6 l~eaA~l~~~~~Ta~~al~~~~~~~~~g~~vli~GaG~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~~ga~~~i~~~   85 (172)
T d1h2ba2           6 LVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVDAR   85 (172)
T ss_dssp             HHHTGGGGTHHHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTTCSEEEETT
T ss_pred             HHHHhHHHhHHHHHHHHHHHhhhccCCCCEEEEeCCChHHHHHHHHHHhhcCcccccccchhHHHHHHhhcccceeecCc
Confidence            5788999999999999987655 489999999999999999999999999988999999999999999999999999987


Q ss_pred             CCChhHHHHHHHHcCC-CccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhh-hccccEEEEEeccCC
Q 018529          223 EHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNY  300 (354)
Q Consensus       223 ~~~~~~~~~i~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~  300 (354)
                      ++   ..+.+.+.+.+ ++|+|||++|+...++.++++++++ |+++++|... +.  .++... +.+++++.|++.+++
T Consensus        86 ~~---~~~~~~~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~-G~iv~~G~~~-~~--~~~~~~l~~k~~~i~Gs~~~~~  158 (172)
T d1h2ba2          86 RD---PVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLGRM-GRLIIVGYGG-EL--RFPTIRVISSEVSFEGSLVGNY  158 (172)
T ss_dssp             SC---HHHHHHHHTTTCCEEEEEESSCCHHHHHHGGGGEEEE-EEEEECCCSS-CC--CCCHHHHHHTTCEEEECCSCCH
T ss_pred             cc---HHHHHHHhhCCCCceEEEEecCcchHHHHHHHHHhCC-CEEEEEeCcc-cc--cCCHHHHHhCCcEEEEEEecCH
Confidence            64   45556667766 9999999999988899999999997 9999999653 33  333333 449999999986543


Q ss_pred             CCCCCHHHHHHHHHccC
Q 018529          301 KPRTDLPSVVDMYMNKQ  317 (354)
Q Consensus       301 ~~~~~~~~~~~~~~~~~  317 (354)
                         ++++++++++.+||
T Consensus       159 ---~d~~~~l~l~~~GK  172 (172)
T d1h2ba2         159 ---VELHELVTLALQGK  172 (172)
T ss_dssp             ---HHHHHHHHHHHTTS
T ss_pred             ---HHHHHHHHHHHcCC
Confidence               57999999999885

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=99.94  E-value=1.3e-26  Score=188.10  Aligned_cols=129  Identities=22%  Similarity=0.295  Sum_probs=120.8

Q ss_pred             CCccchhhcccchhhhhhhhhhhcCCCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEc
Q 018529          142 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN  220 (354)
Q Consensus       142 ~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~  220 (354)
                      +|+++||+++++++|||++|.+.+++++||+|||+|+ |++|++++|+|+..|+ +|++++++++++++++++|+++++|
T Consensus         1 isfe~AA~~~~~~~TA~~al~~~~~l~~g~~Vlv~ga~g~vG~~~iqlak~~Ga-~Vi~~~~s~~k~~~~~~lGa~~vi~   79 (179)
T d1qora2           1 ISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGTAQKAQSALKAGAWQVIN   79 (179)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHTCSEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEEccccccchHHHHHHHHhCC-eEeecccchHHHHHHHhcCCeEEEE
Confidence            5899999999999999999988899999999999976 8899999999999999 9999999999999999999999999


Q ss_pred             CCCCChhHHHHHHHHcCC-CccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCC
Q 018529          221 TSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSK  275 (354)
Q Consensus       221 ~~~~~~~~~~~i~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~  275 (354)
                      +++.+  +.+++++++++ ++|+|+|++|+ +.+..++++++++ |+++.++....
T Consensus        80 ~~~~d--~~~~v~~~t~g~g~d~v~d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~  131 (179)
T d1qora2          80 YREED--LVERLKEITGGKKVRVVYDSVGR-DTWERSLDCLQRR-GLMVSFGNSSG  131 (179)
T ss_dssp             TTTSC--HHHHHHHHTTTCCEEEEEECSCG-GGHHHHHHTEEEE-EEEEECCCTTC
T ss_pred             CCCCC--HHHHHHHHhCCCCeEEEEeCccH-HHHHHHHHHHhcC-CeeeecccccC
Confidence            98876  99999999988 99999999987 7899999999997 99999987653

>d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=99.94  E-value=1.3e-28  Score=199.32  Aligned_cols=156  Identities=18%  Similarity=0.095  Sum_probs=129.4

Q ss_pred             hhcceeeeccCCCc---eE--EEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCC----------CCCCccccccee
Q 018529            9 LTCKAAVAWEAGKP---LI--IQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT----------PLFPRIFGHEAA   73 (354)
Q Consensus         9 ~~~~a~~~~~~~~~---l~--~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~----------~~~p~~~G~e~~   73 (354)
                      +||||+++.++|+|   ++  ..++|.|+|+++||||||++++||++|+++++|..+.          ...|.++|+|++
T Consensus         2 ~t~kA~v~~~~G~p~~~l~l~~~~~p~p~~~~~eVlVkv~a~~i~~~D~~~~~G~~~~~~~~~~~~~~~~~~~v~G~e~~   81 (175)
T d1gu7a1           2 ITAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPCGNEGL   81 (175)
T ss_dssp             EEEEEEEESSCSCHHHHCEEEEEEECTTSCCTTEEEEEEEEEEECHHHHHHHHTCSSCCCCCBSTTCCSSCBEECCSCCE
T ss_pred             ceeEEEEEccCCCcccccEEEEEECCCCCCCcCEEEEEEEEeccCcceeEEEecCcccccccccccCCCCCCcccccccc
Confidence            48999999999886   44  4567777789999999999999999999998875432          246789999999


Q ss_pred             EEEEEeCCCCCCCCCCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccc
Q 018529           74 GVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCG  153 (354)
Q Consensus        74 G~V~~vG~~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~  153 (354)
                      |+|++.|..+..++.||+|...+                      ...|+|+||+.+++++++++|+.++.  ++++.+.
T Consensus        82 g~V~~~~~~~~~~~~g~~v~~~~----------------------~~~g~~aey~~v~~~~~~~iP~~~~~--~~a~~~~  137 (175)
T d1gu7a1          82 FEVIKVGSNVSSLEAGDWVIPSH----------------------VNFGTWRTHALGNDDDFIKLPNPAQS--KANGKPN  137 (175)
T ss_dssp             EEEEEECTTCCSCCTTCEEEESS----------------------SCCCCSBSEEEEEGGGEEEECCHHHH--HHTTCSC
T ss_pred             cccccccccccccccccceeccc----------------------cccccccceeeehhhhccCCCccchh--hhhccch
Confidence            99999999999999999998652                      34579999999999999999998753  3444567


Q ss_pred             hhhhhhhhhh-hcCCCCCCeEEEEc-C-ChhHHHHHHH
Q 018529          154 VSTGLGATLN-VAKPERGSSVAVFG-L-GAVGLAAAEG  188 (354)
Q Consensus       154 ~~~a~~~l~~-~~~~~~~~~vlI~G-~-g~~G~~a~~~  188 (354)
                      ..|||+++.. ..++++|++|||+| + |++|.+++|+
T Consensus       138 ~~ta~~~l~~~~~~~~~g~~vli~gaa~~gvG~~~iQ~  175 (175)
T d1gu7a1         138 GLTDAKSIETLYDGTKPLHELYQDGVANSKDGKQLITY  175 (175)
T ss_dssp             CCCCCCCEEEECCSSSCHHHHHHHHHHTGGGSCEEEEC
T ss_pred             HHHHHHHHHHHhcCCCCCCEEEEECccchhhhheEEeC
Confidence            7889988654 46799999999997 4 6799887763

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.93  E-value=1.2e-25  Score=180.57  Aligned_cols=168  Identities=26%  Similarity=0.430  Sum_probs=143.7

Q ss_pred             CCccchhhcccchhhhhhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcC
Q 018529          142 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT  221 (354)
Q Consensus       142 ~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~  221 (354)
                      +|+++||+++|++.|||+++ +..++++|++|||+|+|++|++++|+|+..|+ +|++++++++|+++++++|++.++++
T Consensus         1 ls~eeAA~l~~~~~Ta~~al-~~~~~~~g~~vlv~G~G~iG~~a~~~a~~~g~-~v~~~~~~~~r~~~~k~~Ga~~~~~~   78 (168)
T d1rjwa2           1 LSFEEAAPIFCAGVTTYKAL-KVTGAKPGEWVAIYGIGGLGHVAVQYAKAMGL-NVVAVDIGDEKLELAKELGADLVVNP   78 (168)
T ss_dssp             SCHHHHGGGGTHHHHHHHHH-HHHTCCTTCEEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCSEEECT
T ss_pred             CCHHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEeecccchhhhhHHHhcCCC-eEeccCCCHHHhhhhhhcCcceeccc
Confidence            58999999999999999996 57899999999999999999999999999999 89999999999999999999999999


Q ss_pred             CCCChhHHHHHHHHcCCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhhccccEEEEEeccCCC
Q 018529          222 SEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYK  301 (354)
Q Consensus       222 ~~~~~~~~~~i~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~  301 (354)
                      .+.+  +.+.+++.+.+ .|.+++++++...++.++++++++ |+++.+|.......++... .+.+++++.|++.+   
T Consensus        79 ~~~~--~~~~~~~~~~~-~~~~v~~~~~~~~~~~a~~~l~~~-G~i~~~g~~~~~~~~~~~~-~~~~~~~i~gs~~~---  150 (168)
T d1rjwa2          79 LKED--AAKFMKEKVGG-VHAAVVTAVSKPAFQSAYNSIRRG-GACVLVGLPPEEMPIPIFD-TVLNGIKIIGSIVG---  150 (168)
T ss_dssp             TTSC--HHHHHHHHHSS-EEEEEESSCCHHHHHHHHHHEEEE-EEEEECCCCSSEEEEEHHH-HHHTTCEEEECCSC---
T ss_pred             ccch--hhhhcccccCC-CceEEeecCCHHHHHHHHHHhccC-CceEecccccCCCCCCHHH-HHHCCcEEEEEeeC---
Confidence            8876  88888888875 455556777778999999999997 9999999876544443322 24599999998754   


Q ss_pred             CCCCHHHHHHHHHccCCC
Q 018529          302 PRTDLPSVVDMYMNKQLE  319 (354)
Q Consensus       302 ~~~~~~~~~~~~~~~~~~  319 (354)
                      ++++++++++++.+|+++
T Consensus       151 ~~~~~~~~l~l~~~Gkik  168 (168)
T d1rjwa2         151 TRKDLQEALQFAAEGKVK  168 (168)
T ss_dssp             CHHHHHHHHHHHHTTSCC
T ss_pred             CHHHHHHHHHHHHhCCCC
Confidence            346899999999999764

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.93  E-value=2.5e-26  Score=183.85  Aligned_cols=170  Identities=15%  Similarity=0.140  Sum_probs=130.3

Q ss_pred             CCccchhhcccchhhhhhh---hhhhcCCCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCce
Q 018529          142 APLDKVCILSCGVSTGLGA---TLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD  217 (354)
Q Consensus       142 ~~~~~aa~l~~~~~~a~~~---l~~~~~~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~  217 (354)
                      +|++|||+++++++|||++   |.+....++|++|||+|+ |++|.+++|+|+.+|+ +|+++.+++++.++++++|+++
T Consensus         1 lS~~eAAal~~aglTA~~a~~~L~~~g~~~~g~~VLI~gaaGGVG~~aiQlak~~Ga-~Viat~~s~~k~~~~~~lGa~~   79 (176)
T d1xa0a2           1 LTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGY-TVEASTGKAAEHDYLRVLGAKE   79 (176)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCTTCHHHHHHTTCSE
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCEEEEEeccchHHHHHHHHHHHcCC-ceEEecCchHHHHHHHhcccce
Confidence            5899999999999999966   445688899999999986 9999999999999999 8999999999999999999999


Q ss_pred             EEcCCCCChhHHHHHHHHcCCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhh-hccccEEEEEe
Q 018529          218 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTF  296 (354)
Q Consensus       218 v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~  296 (354)
                      ++++++.   +.+.++...++++|+|||++|+ +.+..++++|+++ |+++.+|...+. ...++... +.|++++.|..
T Consensus        80 vi~~~~~---~~~~~~~~~~~gvD~vid~vgg-~~~~~~l~~l~~~-Griv~~G~~~g~-~~~~~~~~~~~k~~~i~Gv~  153 (176)
T d1xa0a2          80 VLAREDV---MAERIRPLDKQRWAAAVDPVGG-RTLATVLSRMRYG-GAVAVSGLTGGA-EVPTTVHPFILRGVSLLGID  153 (176)
T ss_dssp             EEECC------------CCSCCEEEEEECSTT-TTHHHHHHTEEEE-EEEEECSCCSSS-CCCCCSHHHHHTTCEEEECC
T ss_pred             eeecchh---HHHHHHHhhccCcCEEEEcCCc-hhHHHHHHHhCCC-ceEEEeecccCc-ccCCCHHHHHHCCcEEEEEe
Confidence            9998653   4444444444599999999998 7999999999997 999999987532 33333333 45999999964


Q ss_pred             ccCCCCCCCHHHHHHHHHccCCCC
Q 018529          297 FGNYKPRTDLPSVVDMYMNKQLEL  320 (354)
Q Consensus       297 ~~~~~~~~~~~~~~~~~~~~~~~~  320 (354)
                      .. ..+.+...++++.+. ++++|
T Consensus       154 ~~-~~~~~~~~~~~~~la-g~lkP  175 (176)
T d1xa0a2         154 SV-YCPMDLRLRIWERLA-GDLKP  175 (176)
T ss_dssp             SS-SCCHHHHHHHHHHHH-TTTCC
T ss_pred             CC-cCCHHHHHHHHHHHh-cccCC
Confidence            32 222344555555553 55544

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.93  E-value=3.4e-26  Score=183.32  Aligned_cols=165  Identities=22%  Similarity=0.329  Sum_probs=136.7

Q ss_pred             CccchhhcccchhhhhhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCC
Q 018529          143 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS  222 (354)
Q Consensus       143 ~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~  222 (354)
                      |.+.||.+.|++.|+|+++ ++.++++|++|+|+|+|++|++++|+|+.+|+ +|++++++++|+++++++|+++++++.
T Consensus         2 p~e~AApl~cag~Ta~~al-~~~~~~~g~~vlI~GaG~vG~~a~q~ak~~G~-~vi~~~~~~~k~~~a~~lGa~~~i~~~   79 (168)
T d1piwa2           2 PSHLAAPLLCGGLTVYSPL-VRNGCGPGKKVGIVGLGGIGSMGTLISKAMGA-ETYVISRSSRKREDAMKMGADHYIATL   79 (168)
T ss_dssp             CHHHHGGGGTHHHHHHHHH-HHTTCSTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHHTCSEEEEGG
T ss_pred             CHHHHHHHHHHHHHHHHHH-HHhCcCCCCEEEEECCCCcchhHHHHhhhccc-cccccccchhHHHHhhccCCcEEeecc
Confidence            4577889999999999996 56899999999999999999999999999999 899999999999999999999999886


Q ss_pred             CCChhHHHHHHHHcCCCccEEEEcccChH--hHHHHHHHhhCCCceEEEEcCCCCCceeecchhhhccccEEEEEeccCC
Q 018529          223 EHDRPIQEVIAEMTNGGVDRSVECTGNID--NMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNY  300 (354)
Q Consensus       223 ~~~~~~~~~i~~~~~~~~dvv~d~~g~~~--~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~  300 (354)
                      +.. ++.+    ...+++|+++||+++..  .++.++++++++ |+++++|.......+++.+. +.+++++.|+..++ 
T Consensus        80 ~~~-~~~~----~~~~~~d~vi~~~~~~~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~-~~k~~~i~Gs~~g~-  151 (168)
T d1piwa2          80 EEG-DWGE----KYFDTFDLIVVCASSLTDIDFNIMPKAMKVG-GRIVSISIPEQHEMLSLKPY-GLKAVSISYSALGS-  151 (168)
T ss_dssp             GTS-CHHH----HSCSCEEEEEECCSCSTTCCTTTGGGGEEEE-EEEEECCCCCSSCCEEECGG-GCBSCEEEECCCCC-
T ss_pred             chH-HHHH----hhhcccceEEEEecCCccchHHHHHHHhhcc-ceEEEeccccccccccHHHH-HhCCcEEEEEeeCC-
Confidence            643 2322    23348999999987643  467899999997 99999998765555554443 55899999987644 


Q ss_pred             CCCCCHHHHHHHHHccCCC
Q 018529          301 KPRTDLPSVVDMYMNKQLE  319 (354)
Q Consensus       301 ~~~~~~~~~~~~~~~~~~~  319 (354)
                        +++++++++++++|+++
T Consensus       152 --~~~~~e~l~li~~gkIk  168 (168)
T d1piwa2         152 --IKELNQLLKLVSEKDIK  168 (168)
T ss_dssp             --HHHHHHHHHHHHHTTCC
T ss_pred             --HHHHHHHHHHHHhCCCC
Confidence              36899999999999764

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=99.93  E-value=1.3e-25  Score=182.37  Aligned_cols=164  Identities=17%  Similarity=0.220  Sum_probs=133.9

Q ss_pred             hhcccchhhhhhhhhhhcCCCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCCh
Q 018529          148 CILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDR  226 (354)
Q Consensus       148 a~l~~~~~~a~~~l~~~~~~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~  226 (354)
                      +++.++++|||+++.+.+++++||+|||+|+ |++|++++|+|+..|+ +|+++++++++.++++++|+++++++.+.+ 
T Consensus         8 ~~lg~~glTA~~al~~~~~v~~G~~VlV~ga~ggvG~~aiqlak~~Ga-~vi~~~~~~~~~~~~~~~Ga~~vi~~~~~~-   85 (182)
T d1v3va2           8 GTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKIAYLKQIGFDAAFNYKTVN-   85 (182)
T ss_dssp             TTTSHHHHHHHHHHHTTTCCCSSCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSEEEETTSCS-
T ss_pred             HHHhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchhHHHHHHHHccCC-EEEEeCCCHHHHHHHHhhhhhhhccccccc-
Confidence            4678899999999999999999999999987 8999999999999999 999999999999999999999999988876 


Q ss_pred             hHHHHHHHHcCC-CccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCC-----Cceeecchhh-hccccEEEEEeccC
Q 018529          227 PIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSK-----DAVFMTKPIN-VLNERTLKGTFFGN  299 (354)
Q Consensus       227 ~~~~~i~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~-----~~~~~~~~~~-~~~~~~i~g~~~~~  299 (354)
                       +.+.+.+.+.+ ++|+|||++|+ +.++.++++++++ |+++.+|....     .......+.. +.+++++.|++...
T Consensus        86 -~~~~~~~~~~~~Gvd~v~D~vG~-~~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~l~~k~~ti~g~~~~~  162 (182)
T d1v3va2          86 -SLEEALKKASPDGYDCYFDNVGG-EFLNTVLSQMKDF-GKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYR  162 (182)
T ss_dssp             -CHHHHHHHHCTTCEEEEEESSCH-HHHHHHGGGEEEE-EEEEECCCGGGTTCTTSCCBCCCHHHHHHTTCEEEECCGGG
T ss_pred             -HHHHHHHHhhcCCCceeEEecCc-hhhhhhhhhccCC-CeEEeecceeeccccccCCCCcchHHHhhcCcEEEEEEEec
Confidence             66777776666 99999999997 7899999999997 99999986432     1122233332 45999999988765


Q ss_pred             CCCC---CCHHHHHHHHHcc
Q 018529          300 YKPR---TDLPSVVDMYMNK  316 (354)
Q Consensus       300 ~~~~---~~~~~~~~~~~~~  316 (354)
                      +...   +.++++++++.+|
T Consensus       163 ~~~~~~~~~~~~l~~~i~~G  182 (182)
T d1v3va2         163 WQGDVREKALRDLMKWVLEG  182 (182)
T ss_dssp             CCHHHHHHHHHHHHHHHHTT
T ss_pred             cChHHHHHHHHHHHHHHhCc
Confidence            5321   2356666766654

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=99.92  E-value=1.3e-25  Score=179.94  Aligned_cols=164  Identities=21%  Similarity=0.317  Sum_probs=132.4

Q ss_pred             CCccchhhcccchhhhhhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcC
Q 018529          142 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT  221 (354)
Q Consensus       142 ~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~  221 (354)
                      .+++.+|.++|+..|+|+++ +++++++|++|+|+|+|++|++++|+|+.+|+ ++++++++++++++++++|+++++++
T Consensus         4 ~~~a~~Apl~Cag~Tay~al-~~~~~~~G~~VlI~GaG~vG~~a~qlak~~Ga-~~i~~~~~~~~~~~a~~lGad~~i~~   81 (168)
T d1uufa2           4 EQLAAVAPLLCAGITTYSPL-RHWQAGPGKKVGVVGIGGLGHMGIKLAHAMGA-HVVAFTTSEAKREAAKALGADEVVNS   81 (168)
T ss_dssp             GGHHHHGGGGTHHHHHHHHH-HHTTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHTCSEEEET
T ss_pred             ccHHHHHHHHhHHHHHHHHH-HHhCCCCCCEEEEeccchHHHHHHHHhhcccc-cchhhccchhHHHHHhccCCcEEEEC
Confidence            45678888999999999996 67999999999999999999999999999999 77789899999999999999999998


Q ss_pred             CCCChhHHHHHHHHcCCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhh-hccccEEEEEeccCC
Q 018529          222 SEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNY  300 (354)
Q Consensus       222 ~~~~~~~~~~i~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~  300 (354)
                      .+.+  .    .....+++|++||++|++..++.++++++++ |+++++|..... ...+.... +.+++++.|++.++ 
T Consensus        82 ~~~~--~----~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~-~~~~~~~~l~~k~~~i~Gs~~~~-  152 (168)
T d1uufa2          82 RNAD--E----MAAHLKSFDFILNTVAAPHNLDDFTTLLKRD-GTMTLVGAPATP-HKSPEVFNLIMKRRAIAGSMIGG-  152 (168)
T ss_dssp             TCHH--H----HHTTTTCEEEEEECCSSCCCHHHHHTTEEEE-EEEEECCCC--------CHHHHHTTTCEEEECCSCC-
T ss_pred             chhh--H----HHHhcCCCceeeeeeecchhHHHHHHHHhcC-CEEEEeccCCCC-cccccHHHHHHCCcEEEEEeecC-
Confidence            7643  1    1112238999999999988899999999997 999999976533 22333333 45999999987543 


Q ss_pred             CCCCCHHHHHHHHHccCC
Q 018529          301 KPRTDLPSVVDMYMNKQL  318 (354)
Q Consensus       301 ~~~~~~~~~~~~~~~~~~  318 (354)
                        +.+++++++++.+++|
T Consensus       153 --~~d~~e~l~l~a~~~I  168 (168)
T d1uufa2         153 --IPETQEMLDFCAEHGI  168 (168)
T ss_dssp             --HHHHHHHHHHHHHHTC
T ss_pred             --HHHHHHHHHHHHHcCC
Confidence              3678999999988754

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.91  E-value=2.8e-25  Score=178.22  Aligned_cols=146  Identities=19%  Similarity=0.294  Sum_probs=118.6

Q ss_pred             CCccchhhcccchhhhhhhhhhhcCCCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEc
Q 018529          142 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN  220 (354)
Q Consensus       142 ~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~  220 (354)
                      +|+++||+++++++|||+++ +.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++.++++++|++++++
T Consensus         1 ls~eeAA~l~~~~~TA~~al-~~~~~~~g~~VlI~ga~G~vG~~aiqlak~~G~-~vi~~~~~~~~~~~~~~lGa~~~i~   78 (171)
T d1iz0a2           1 LSPEEAAAFPVSFLTAYLAL-KRAQARPGEKVLVQAAAGALGTAAVQVARAMGL-RVLAAASRPEKLALPLALGAEEAAT   78 (171)
T ss_dssp             CCHHHHHTSHHHHHHHHHHH-HHTTCCTTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSGGGSHHHHHTTCSEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEEeccccchhhhhhhhccccc-ccccccccccccccccccccceeee
Confidence            58899999999999999997 5689999999999986 9999999999999999 8999999999999999999999998


Q ss_pred             CCCCChhHHHHHHHHcCC-CccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhh-hccccEEEEEecc
Q 018529          221 TSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFG  298 (354)
Q Consensus       221 ~~~~~~~~~~~i~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~  298 (354)
                      +.+    ..   ++.+.+ |+|+|||++|.  .++.++++++++ |+++.+|...+ ....++... +.|++++.|+++.
T Consensus        79 ~~~----~~---~~~~~~~g~D~v~d~~G~--~~~~~~~~l~~~-G~~v~~G~~~g-~~~~~~~~~~~~k~~~i~g~~~~  147 (171)
T d1iz0a2          79 YAE----VP---ERAKAWGGLDLVLEVRGK--EVEESLGLLAHG-GRLVYIGAAEG-EVAPIPPLRLMRRNLAVLGFWLT  147 (171)
T ss_dssp             GGG----HH---HHHHHTTSEEEEEECSCT--THHHHHTTEEEE-EEEEEC--------CCCCTTHHHHTTCEEEECCHH
T ss_pred             hhh----hh---hhhhccccccccccccch--hHHHHHHHHhcC-CcEEEEeCCCC-CCCCccHHHHHHCCcEEEEEeCc
Confidence            754    32   333434 89999999874  689999999997 99999997653 233343333 4599999999876


Q ss_pred             CC
Q 018529          299 NY  300 (354)
Q Consensus       299 ~~  300 (354)
                      .+
T Consensus       148 ~~  149 (171)
T d1iz0a2         148 PL  149 (171)
T ss_dssp             HH
T ss_pred             Ch
Confidence            54

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=99.91  E-value=5.7e-25  Score=179.55  Aligned_cols=172  Identities=16%  Similarity=0.213  Sum_probs=133.0

Q ss_pred             CCccchhhcccchhhhhhhhhhhcCCCCCCeEEEE-cC-ChhHHHHHHHHHHcCCcEEEEEcCCh----hhHHHHHhcCC
Q 018529          142 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVF-GL-GAVGLAAAEGARIAGASRIIGVDRSS----KRFEEAKKFGV  215 (354)
Q Consensus       142 ~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vlI~-G~-g~~G~~a~~~a~~~g~~~vi~v~~~~----~~~~~~~~lg~  215 (354)
                      +|+++||+++++++|||+++.+.+++++|++|+|+ |+ |++|++++|+||.+|+ +||++.++.    ++.++++++|+
T Consensus         1 ls~~~AA~l~~~~~TA~~~l~~~~~~~~g~~vli~~ga~g~vG~~aiqlAk~~Ga-~vI~~v~~~~~~~~~~~~~~~lGa   79 (189)
T d1gu7a2           1 LTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNF-NSISVIRDRPNLDEVVASLKELGA   79 (189)
T ss_dssp             CCHHHHHTCTTHHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTC-EEEEEECCCTTHHHHHHHHHHHTC
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchHHHHHHHHHhhcCC-eEEEEEecccccchHHhhhhhccc
Confidence            58999999999999999999889999999999997 55 9999999999999999 777775543    45667889999


Q ss_pred             ceEEcCCCCC-hhHHHHHHHHc---CCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhh-hcccc
Q 018529          216 TDFVNTSEHD-RPIQEVIAEMT---NGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNER  290 (354)
Q Consensus       216 ~~v~~~~~~~-~~~~~~i~~~~---~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~  290 (354)
                      ++++++++.+ .++.+.+++.+   ++++|+|||++|+ +.+..++++|+++ |+++.+|..... +..++... +.|++
T Consensus        80 d~vi~~~~~~~~~~~~~v~~~~~~~g~~vdvv~D~vg~-~~~~~~~~~l~~~-G~~v~~G~~~~~-~~~~~~~~l~~k~~  156 (189)
T d1gu7a2          80 TQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGG-KSSTGIARKLNNN-GLMLTYGGMSFQ-PVTIPTSLYIFKNF  156 (189)
T ss_dssp             SEEEEHHHHHCGGGHHHHHHHHHHHTCCEEEEEESSCH-HHHHHHHHTSCTT-CEEEECCCCSSC-CEEECHHHHHHSCC
T ss_pred             cEEEeccccchhHHHHHHHHHHhhccCCceEEEECCCc-chhhhhhhhhcCC-cEEEEECCccCC-CccCcHHHHHHCCc
Confidence            9999875432 34555555543   3489999999997 6889999999997 999999976533 33444443 34899


Q ss_pred             EEEEEeccCCCCC------CCHHHHHHHHHccC
Q 018529          291 TLKGTFFGNYKPR------TDLPSVVDMYMNKQ  317 (354)
Q Consensus       291 ~i~g~~~~~~~~~------~~~~~~~~~~~~~~  317 (354)
                      ++.|+++..+...      +.+.++++++++|+
T Consensus       157 ~i~G~~~~~~~~~~~~~~~~~~~~l~~l~~~Gk  189 (189)
T d1gu7a2         157 TSAGFWVTELLKNNKELKTSTLNQIIAWYEEGK  189 (189)
T ss_dssp             EEEECCHHHHHTTCHHHHHHHHHHHHHHHHHTC
T ss_pred             EEEEEEehHhhhhCHHHHHHHHHHHHHHHHcCC
Confidence            9999876543221      23566777777663

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.90  E-value=3.3e-24  Score=174.61  Aligned_cols=172  Identities=19%  Similarity=0.216  Sum_probs=129.7

Q ss_pred             CCCccchhhcccchhhhhhhhhhhcCCCCC--CeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHH-HHHhcCCc
Q 018529          141 LAPLDKVCILSCGVSTGLGATLNVAKPERG--SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFE-EAKKFGVT  216 (354)
Q Consensus       141 ~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~--~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~-~~~~lg~~  216 (354)
                      ++|+.+.| ++++++|||+++.+.+++++|  ++|||+|+ |++|++++|+||.+|+++|+++++++++.. +.+++|++
T Consensus         1 ~~~~~~ga-lg~~glTA~~~l~~~~~~~~G~~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~gad   79 (187)
T d1vj1a2           1 HLSYFLGA-IGMPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFD   79 (187)
T ss_dssp             CGGGGGTT-TSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCCS
T ss_pred             CccHHHHH-hhcHHHHHHHHHHHHhCCCCCCCCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccce
Confidence            35566643 677899999999999999988  88999986 999999999999999977887776766555 55679999


Q ss_pred             eEEcCCCCChhHHHHHHHHcCCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCC---cee--ecc---h-hhhc
Q 018529          217 DFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD---AVF--MTK---P-INVL  287 (354)
Q Consensus       217 ~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~---~~~--~~~---~-~~~~  287 (354)
                      +++|+.+++  +.+.+++.++.|+|+|||++|+ +.++.++++++++ |+++.+|..+..   .+.  ...   . ....
T Consensus        80 ~vi~~~~~~--~~~~~~~~~~~GvDvv~D~vGg-~~~~~~~~~l~~~-G~iv~~G~~s~~~~~~~~~~~~~~~~~~~~~~  155 (187)
T d1vj1a2          80 AAVNYKTGN--VAEQLREACPGGVDVYFDNVGG-DISNTVISQMNEN-SHIILCGQISQYNKDVPYPPPLPPAVEAIRKE  155 (187)
T ss_dssp             EEEETTSSC--HHHHHHHHCTTCEEEEEESSCH-HHHHHHHTTEEEE-EEEEEC------------CCCCCHHHHHHHHH
T ss_pred             EEeeccchh--HHHHHHHHhccCceEEEecCCc-hhHHHHhhhcccc-ccEEEeccccccccccccCCchHHHHHHHHHh
Confidence            999999887  8899999987799999999997 7899999999997 999999864321   111  111   1 1123


Q ss_pred             cccEEEEEeccCCCCC--CCHHHHHHHHHccC
Q 018529          288 NERTLKGTFFGNYKPR--TDLPSVVDMYMNKQ  317 (354)
Q Consensus       288 ~~~~i~g~~~~~~~~~--~~~~~~~~~~~~~~  317 (354)
                      ++++++|+...++.++  +.++++++++.+||
T Consensus       156 k~i~~~g~~~~~~~~~~~e~~~~l~~~i~~Gk  187 (187)
T d1vj1a2         156 RNITRERFTVLNYKDKFEPGILQLSQWFKEGK  187 (187)
T ss_dssp             TTCEEEECCGGGCGGGHHHHHHHHHHHHHHTS
T ss_pred             cceEEEEeEecchHHHHHHHHHHHHHHHHCcC
Confidence            8889998876554321  23566667777663

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=99.89  E-value=9.2e-23  Score=166.51  Aligned_cols=165  Identities=23%  Similarity=0.203  Sum_probs=132.1

Q ss_pred             cchhhcccchhhhhhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCC
Q 018529          145 DKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEH  224 (354)
Q Consensus       145 ~~aa~l~~~~~~a~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~  224 (354)
                      ++.+.|...++|||+++ +.+++++|++|||+|+|++|++++++|+..|+.+|++++.+++|+++++++|+++++++.+.
T Consensus         2 ~d~~~l~d~~~ta~~a~-~~a~v~~G~tVlV~GaG~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~~Ga~~~~~~~~~   80 (195)
T d1kola2           2 RDLTCLSDILPTGYHGA-VTAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFEIADLSLDT   80 (195)
T ss_dssp             HHHGGGGTHHHHHHHHH-HHTTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCEEEETTSSS
T ss_pred             chHHhcccHHHHHHHHH-HHhCCCCCCEEEEECcCHHHHHHHHHHHhhcccceeeecccchhhHhhhhccccEEEeCCCc
Confidence            46678888999999995 67999999999999999999999999999999899999999999999999999999988877


Q ss_pred             ChhHHHHHHHHcCC-CccEEEEcccC---------------hHhHHHHHHHhhCCCceEEEEcCCCCCceee--------
Q 018529          225 DRPIQEVIAEMTNG-GVDRSVECTGN---------------IDNMISAFECVHDGWGVAVLVGVPSKDAVFM--------  280 (354)
Q Consensus       225 ~~~~~~~i~~~~~~-~~dvv~d~~g~---------------~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~--------  280 (354)
                      +  +.+.+.+++++ ++|++||++|.               ++.++.++++++++ |+++++|.........        
T Consensus        81 ~--~~~~i~~~t~g~g~D~vid~vG~~~~~~~~~~~~~~~~~~~l~~~~~~~r~g-G~v~~~G~~~~~~~~~~~~~~~~~  157 (195)
T d1kola2          81 P--LHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVA-GKIGIPGLYVTEDPGAVDAAAKIG  157 (195)
T ss_dssp             C--HHHHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEE-EEEEECSCCCSCCTTCSSHHHHTT
T ss_pred             C--HHHHHHHHhCCCCcEEEEECccccccCCcccceeecCcHHHHHHHHHHHhcC-CEEEEeeecCCCcccchhhhhhcC
Confidence            6  88999999988 99999999984               36899999999997 9999999754332211        


Q ss_pred             ---cch-hhhccccEEEEEeccCCCCCCCHHHHHHHHHcc
Q 018529          281 ---TKP-INVLNERTLKGTFFGNYKPRTDLPSVVDMYMNK  316 (354)
Q Consensus       281 ---~~~-~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~  316 (354)
                         +.. ..+.|++++.+..   ..-++.++++++++.++
T Consensus       158 ~~~~~~~~~~~k~~~i~~g~---~~v~~~~~~Ll~~I~~~  194 (195)
T d1kola2         158 SLSIRFGLGWAKSHSFHTGQ---TPVMKYNRALMQAIMWD  194 (195)
T ss_dssp             CCCCCHHHHHHTTCEEEESS---CCHHHHHHHHHHHHHTT
T ss_pred             ceeeeHHHHHhhcceeccCC---CchHHHHHHHHHHHHcC
Confidence               111 1233677765411   11112356777777655

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.86  E-value=1.5e-22  Score=162.05  Aligned_cols=147  Identities=16%  Similarity=0.216  Sum_probs=119.1

Q ss_pred             CCccchhhcccchhhhhhhhh---hhcCCCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCce
Q 018529          142 APLDKVCILSCGVSTGLGATL---NVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD  217 (354)
Q Consensus       142 ~~~~~aa~l~~~~~~a~~~l~---~~~~~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~  217 (354)
                      +|+.+|++++++..|||++++   +....+++++|||+|+ |++|.+++|+||.+|+ +|+++++++++.++++++|+++
T Consensus         1 l~~~~Aa~lg~aGlTA~~a~~~l~~~g~~~~~~~vlV~gasGGVG~~aiQlAk~~Ga-~Via~~~~~~k~~~~~~lGad~   79 (177)
T d1o89a2           1 LDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGY-QVVAVSGRESTHEYLKSLGASR   79 (177)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCGGGHHHHHHHTEEE
T ss_pred             CCHHHHHHcccHHHHHHHHHHHHHHhCCCCCCCcEEEEEccccchHHHHHHHHHcCC-CeEEEecchhHHHHHHhhcccc
Confidence            578999999999999998753   3344455679999986 9999999999999999 8999999999999999999999


Q ss_pred             EEcCCCCChhHHHHHHHHcCCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhh-hccccEEEEEe
Q 018529          218 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTF  296 (354)
Q Consensus       218 v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~  296 (354)
                      ++++++.+  +.   +.+.+...|.++|++|+ +.+..++++++++ |+++.+|...+. ....+... +.|++++.|++
T Consensus        80 vi~~~~~~--~~---~~l~~~~~~~vvD~Vgg-~~~~~~l~~l~~~-Griv~~G~~~~~-~~~~~~~~~~~k~~~i~G~~  151 (177)
T d1o89a2          80 VLPRDEFA--ES---RPLEKQVWAGAIDTVGD-KVLAKVLAQMNYG-GCVAACGLAGGF-TLPTTVMPFILRNVRLQGVD  151 (177)
T ss_dssp             EEEGGGSS--SC---CSSCCCCEEEEEESSCH-HHHHHHHHTEEEE-EEEEECCCTTCS-CCCCCSHHHHHHCCEEEECC
T ss_pred             ccccccHH--HH---HHHHhhcCCeeEEEcch-HHHHHHHHHhccc-cceEeecccCCc-cccccHHHHHHCCCeEEEEe
Confidence            99987654  21   22333468999999998 7899999999997 999999987532 23333333 45999999976


Q ss_pred             c
Q 018529          297 F  297 (354)
Q Consensus       297 ~  297 (354)
                      .
T Consensus       152 ~  152 (177)
T d1o89a2         152 S  152 (177)
T ss_dssp             S
T ss_pred             c
Confidence            4

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=99.84  E-value=8.1e-22  Score=156.27  Aligned_cols=138  Identities=15%  Similarity=0.162  Sum_probs=109.0

Q ss_pred             chhhhhh---hhhhhcCCCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhH
Q 018529          153 GVSTGLG---ATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPI  228 (354)
Q Consensus       153 ~~~~a~~---~l~~~~~~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~  228 (354)
                      +..|||.   +|.+....+++++|||+|+ |++|.+++|+||.+|+ +|+++.++++|.++++++|++.++++++..   
T Consensus         4 aGlTA~~a~~~L~~~g~~~~~~~VLV~gaaGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~~~~lGad~vi~~~~~~---   79 (167)
T d1tt7a2           4 AGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGY-DVVASTGNREAADYLKQLGASEVISREDVY---   79 (167)
T ss_dssp             HHHHHHHHHHHHHHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTC-CEEEEESSSSTHHHHHHHTCSEEEEHHHHC---
T ss_pred             hHHHHHHHHHHHHHhcCCCCCCEEEEeCCcchHHHHHHHHHHHcCC-ceEEEecCHHHHHHHHhhcccceEeccchh---
Confidence            4556664   4555666778999999986 9999999999999999 899999999999999999999998875321   


Q ss_pred             HHHHHHHcCCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchh-hhccccEEEEEec
Q 018529          229 QEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI-NVLNERTLKGTFF  297 (354)
Q Consensus       229 ~~~i~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~-~~~~~~~i~g~~~  297 (354)
                      .+.++...++++|+|||++|+ +.+..++++|+++ |+++.+|...+. ..+++.. .+.|+++++|+..
T Consensus        80 ~~~~~~~~~~gvd~vid~vgg-~~~~~~~~~l~~~-G~iv~~G~~~g~-~~~~~~~~l~~k~~~i~G~~~  146 (167)
T d1tt7a2          80 DGTLKALSKQQWQGAVDPVGG-KQLASLLSKIQYG-GSVAVSGLTGGG-EVPATVYPFILRGVSLLGIDS  146 (167)
T ss_dssp             SSCCCSSCCCCEEEEEESCCT-HHHHHHHTTEEEE-EEEEECCCSSCS-CEEECSHHHHTSCCEEEECCS
T ss_pred             chhhhcccCCCceEEEecCcH-HHHHHHHHHhccC-ceEEEeeccCCC-cccCCHHHHHHCCcEEEEEec
Confidence            112223333499999999998 7899999999997 999999988643 3344333 3559999999753

>d1v3va1 b.35.1.2 (A:1-112,A:295-329) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=99.71  E-value=1.2e-16  Score=122.81  Aligned_cols=133  Identities=16%  Similarity=0.107  Sum_probs=99.6

Q ss_pred             hhcceeeeccC--CCc----eEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCC
Q 018529            9 LTCKAAVAWEA--GKP----LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEG   82 (354)
Q Consensus         9 ~~~~a~~~~~~--~~~----l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~   82 (354)
                      ++.|++++.+.  |.|    +++++.++|+|++||||||++|.++++........    .....++..+.+|+|++  |+
T Consensus         2 ~~~k~~vl~~~P~G~P~~~~f~l~e~~ip~~~~gevLvk~~~~svDp~~R~~~~~----~~~g~~~~g~~vg~Vv~--S~   75 (147)
T d1v3va1           2 VKAKSWTLKKHFQGKPTQSDFELKTVELPPLKNGEVLLEALFLSVDPYMRIASKR----LKEGAVMMGQQVARVVE--SK   75 (147)
T ss_dssp             CEEEEEEESSCCCSSCCGGGEEEEEEECCCCCTTCEEEEEEEEECCTHHHHHGGG----SCTTSBCCCCEEEEEEE--ES
T ss_pred             cccEEEEEccCCCCCCcccceEEEEEECCCCCCCEEEEEEEEEeEcccccccccc----cccCCccccceEEEEEE--eC
Confidence            35688888765  333    89999999999999999999999998764433221    22233456688999987  67


Q ss_pred             CCCCCCCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCC-----ccchhhcccchhhh
Q 018529           83 VSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAP-----LDKVCILSCGVSTG  157 (354)
Q Consensus        83 ~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~-----~~~aa~l~~~~~~a  157 (354)
                      .++|++||+|.+.                          ++|+||.+++.+.+.++|+.++     ....+++....+||
T Consensus        76 ~~~f~~GD~V~g~--------------------------~gw~ey~v~~~~~l~kv~~~~~~~~~~~~~~~~lG~~Gmta  129 (147)
T d1v3va1          76 NSAFPAGSIVLAQ--------------------------SGWTTHFISDGKGLEKLLTEWPDKKIQYHEHVTKGFENMPA  129 (147)
T ss_dssp             CTTSCTTCEEEEC--------------------------CCSBSEEEECSSSCEECCTTCCTTSSCCCEEEEECGGGHHH
T ss_pred             CCcccCCCEEEEc--------------------------cCCEeEEEeccceeeEccccccccccchhhhHhccccchHH
Confidence            7899999999854                          6899999999999999987643     33455566677764


Q ss_pred             -hhhhhhhcCCCCCCeEEE
Q 018529          158 -LGATLNVAKPERGSSVAV  175 (354)
Q Consensus       158 -~~~l~~~~~~~~~~~vlI  175 (354)
                       |..++  ...+.|++||+
T Consensus       130 ay~gl~--~~~k~Getvv~  146 (147)
T d1v3va1         130 AFIEML--NGANLGKAVVT  146 (147)
T ss_dssp             HHHHHH--TTCCSSEEEEE
T ss_pred             HHHHhh--CCCCCCCEEEe
Confidence             44553  44578999986

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.56  E-value=1.6e-15  Score=101.86  Aligned_cols=73  Identities=19%  Similarity=0.245  Sum_probs=66.2

Q ss_pred             CCccchhhcccchhhhhhhhh---hhcCCCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCC
Q 018529          142 APLDKVCILSCGVSTGLGATL---NVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV  215 (354)
Q Consensus       142 ~~~~~aa~l~~~~~~a~~~l~---~~~~~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~  215 (354)
                      +|++||+.+++++.|||.+++   +...++++++|||+|+ |++|.+++|+|+.+|+ +|+++++++++.++++++|+
T Consensus         1 ls~~eAa~lg~aGlTA~~al~~~~~~~~~~~~~~vlI~gasGgVG~~aiQlak~~G~-~Vi~~t~s~~k~~~~~~lGA   77 (77)
T d1o8ca2           1 LDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGY-QVVAVSGRESTHEYLKSLGA   77 (77)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCGGGHHHHHHHTE
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHHhhhhccCCCcEEEEeCCCcHHHHHHHHHHHcCC-eEEEEECCHHHHHHHHHCCC
Confidence            578999999999999998754   4566799999999986 9999999999999999 89999999999999999984

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=98.23  E-value=1.4e-06  Score=66.29  Aligned_cols=100  Identities=22%  Similarity=0.142  Sum_probs=73.8

Q ss_pred             CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEccc
Q 018529          169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  248 (354)
Q Consensus       169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g  248 (354)
                      +.-+|+|+|+|..|+.|+..|+.+|+ .|.+.|.+.++++.+++.....+.........+.+.++     .+|+||.++=
T Consensus        31 ~pa~V~ViGaGvaG~~A~~~A~~lGA-~V~~~D~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~-----~aDivI~aal  104 (168)
T d1pjca1          31 KPGKVVILGGGVVGTEAAKMAVGLGA-QVQIFDINVERLSYLETLFGSRVELLYSNSAEIETAVA-----EADLLIGAVL  104 (168)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGSEEEECCHHHHHHHHH-----TCSEEEECCC
T ss_pred             CCcEEEEECCChHHHHHHHHHhhCCC-EEEEEeCcHHHHHHHHHhhcccceeehhhhhhHHHhhc-----cCcEEEEeee
Confidence            45789999999999999999999999 99999999999999887543222111111122444443     3799999864


Q ss_pred             Ch-----H-hHHHHHHHhhCCCceEEEEcCCCC
Q 018529          249 NI-----D-NMISAFECVHDGWGVAVLVGVPSK  275 (354)
Q Consensus       249 ~~-----~-~~~~~~~~l~~~~g~~v~~g~~~~  275 (354)
                      .+     . ..+..++.|+++ +.+|.++...+
T Consensus       105 ipG~~aP~lIt~~mv~~Mk~G-SVIVDvaidqG  136 (168)
T d1pjca1         105 VPGRRAPILVPASLVEQMRTG-SVIVDVAVDQG  136 (168)
T ss_dssp             CTTSSCCCCBCHHHHTTSCTT-CEEEETTCTTC
T ss_pred             cCCcccCeeecHHHHhhcCCC-cEEEEeecCCC
Confidence            32     1 356889999997 99998887553

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=98.05  E-value=8.8e-06  Score=62.73  Aligned_cols=103  Identities=19%  Similarity=0.202  Sum_probs=74.7

Q ss_pred             CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCC------------------ChhHHH
Q 018529          169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEH------------------DRPIQE  230 (354)
Q Consensus       169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~------------------~~~~~~  230 (354)
                      +.-+|+|+|+|..|+.|+..|+.+|+ .|.+.|.+.++++.+++++...+....+.                  .....+
T Consensus        28 ~pa~VvViGaGvaG~~Aa~~A~~lGA-~V~v~D~~~~~~~~l~~l~~~~i~~~~~~~~~~~~~~gyA~~~s~~~~~~~~~  106 (183)
T d1l7da1          28 PPARVLVFGVGVAGLQAIATAKRLGA-VVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAE  106 (183)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHH
T ss_pred             CCcEEEEEcCcHHHHHHHHHHHHcCC-EEEEEeccHHHHHHHHHhhcceEEEeccccccccccccchhhcCHHHHHHHHH
Confidence            35689999999999999999999999 99999999999999999987544211000                  001222


Q ss_pred             HHHHHcCCCccEEEEcccCh-----H-hHHHHHHHhhCCCceEEEEcCCC
Q 018529          231 VIAEMTNGGVDRSVECTGNI-----D-NMISAFECVHDGWGVAVLVGVPS  274 (354)
Q Consensus       231 ~i~~~~~~~~dvv~d~~g~~-----~-~~~~~~~~l~~~~g~~v~~g~~~  274 (354)
                      .+.+... ..|+||-++=.+     . .-+..++.|+++ +.+|.++...
T Consensus       107 ~l~~~l~-~aDlVI~talipG~~aP~lit~~mv~~Mk~G-SVIVDvaidq  154 (183)
T d1l7da1         107 AVLKELV-KTDIAITTALIPGKPAPVLITEEMVTKMKPG-SVIIDLAVEA  154 (183)
T ss_dssp             HHHHHHT-TCSEEEECCCCTTSCCCCCSCHHHHTTSCTT-CEEEETTGGG
T ss_pred             HHHHHHH-hhhhheeeeecCCcccceeehHHHHHhcCCC-cEEEEEeecC
Confidence            3333222 589999876332     1 356889999997 9999888654

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=98.02  E-value=2.2e-06  Score=68.97  Aligned_cols=102  Identities=19%  Similarity=0.206  Sum_probs=74.1

Q ss_pred             hhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH----HhcCCceEEcCCCCChhHHHHHHHHc
Q 018529          161 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTDFVNTSEHDRPIQEVIAEMT  236 (354)
Q Consensus       161 l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~----~~lg~~~v~~~~~~~~~~~~~i~~~~  236 (354)
                      +.+...+++|++||.+|+|. |+.++.+|+..|. +|++++.+++-.+.+    +++|.+.+.....+-   .+-.  ..
T Consensus        70 ml~~L~l~~g~~VLeIGsGs-GY~taila~l~g~-~V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~gd~---~~g~--~~  142 (215)
T d1jg1a_          70 MLEIANLKPGMNILEVGTGS-GWNAALISEIVKT-DVYTIERIPELVEFAKRNLERAGVKNVHVILGDG---SKGF--PP  142 (215)
T ss_dssp             HHHHHTCCTTCCEEEECCTT-SHHHHHHHHHHCS-CEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCG---GGCC--GG
T ss_pred             HHHhhccCccceEEEecCCC-ChhHHHHHHhhCc-eeEEEeccHHHHHHHHHHHHHcCCceeEEEECcc---ccCC--cc
Confidence            46778999999999999874 8888999988886 899999998765554    457876654332221   0000  11


Q ss_pred             CCCccEEEEcccChHhHHHHHHHhhCCCceEEEE
Q 018529          237 NGGVDRSVECTGNIDNMISAFECVHDGWGVAVLV  270 (354)
Q Consensus       237 ~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~  270 (354)
                      .+.||+|+.+.+....-...++.|+++ |+++..
T Consensus       143 ~~pfD~Iiv~~a~~~ip~~l~~qL~~g-GrLv~p  175 (215)
T d1jg1a_         143 KAPYDVIIVTAGAPKIPEPLIEQLKIG-GKLIIP  175 (215)
T ss_dssp             GCCEEEEEECSBBSSCCHHHHHTEEEE-EEEEEE
T ss_pred             cCcceeEEeecccccCCHHHHHhcCCC-CEEEEE
Confidence            237999998877656667889999997 998763

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.97  E-value=5.3e-06  Score=66.90  Aligned_cols=102  Identities=21%  Similarity=0.240  Sum_probs=73.2

Q ss_pred             hhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCc-EEEEEcCChhhHHHHHh----cCCceEEcCCCCChhHHHHHHHH
Q 018529          161 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGAS-RIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEM  235 (354)
Q Consensus       161 l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~-~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~~  235 (354)
                      +.+..++++|++||-+|+|. |..++.+|+..|.. +|++++.+++..+.+++    .+...+.....+   ..+..  .
T Consensus        67 ~l~~l~l~~g~~VLdiG~Gt-G~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~d---~~~~~--~  140 (213)
T d1dl5a1          67 FMEWVGLDKGMRVLEIGGGT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGD---GYYGV--P  140 (213)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESC---GGGCC--G
T ss_pred             HHHhhhccccceEEEecCcc-chhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhcccccccccCc---hHHcc--c
Confidence            45778999999999999976 88999999988632 89999999988877754    455433322111   10000  1


Q ss_pred             cCCCccEEEEcccChHhHHHHHHHhhCCCceEEE
Q 018529          236 TNGGVDRSVECTGNIDNMISAFECVHDGWGVAVL  269 (354)
Q Consensus       236 ~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~  269 (354)
                      ..+.||+|+...+-....+.+++.|+++ |+++.
T Consensus       141 ~~~~fD~I~~~~~~~~~p~~l~~~LkpG-G~lv~  173 (213)
T d1dl5a1         141 EFSPYDVIFVTVGVDEVPETWFTQLKEG-GRVIV  173 (213)
T ss_dssp             GGCCEEEEEECSBBSCCCHHHHHHEEEE-EEEEE
T ss_pred             cccchhhhhhhccHHHhHHHHHHhcCCC-cEEEE
Confidence            1236999998876655567788999997 99876

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=97.95  E-value=4.5e-05  Score=62.79  Aligned_cols=105  Identities=25%  Similarity=0.155  Sum_probs=72.9

Q ss_pred             CCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceE-EcCCCCC--hhHHHHHHHHcCCCccEE
Q 018529          168 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHD--RPIQEVIAEMTNGGVDRS  243 (354)
Q Consensus       168 ~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v-~~~~~~~--~~~~~~i~~~~~~~~dvv  243 (354)
                      -+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+++.+...+ .|..+.+  +.+.+++.+.. |+.|++
T Consensus         3 l~GK~alITGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-G~iDiL   80 (248)
T d2d1ya1           3 FAGKGVLVTGGARGIGRAIAQAFAREGA-LVALCDLRPEGKEVAEAIGGAFFQVDLEDERERVRFVEEAAYAL-GRVDVL   80 (248)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTTHHHHHHHHTCEEEECCTTCHHHHHHHHHHHHHHH-SCCCEE
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhc-CCCCeE
Confidence            46899999987 9999999999999999 99999999999998888887543 3333321  12233332222 479999


Q ss_pred             EEcccCh-------------------------HhHHHHHHHhhC-CCceEEEEcCCC
Q 018529          244 VECTGNI-------------------------DNMISAFECVHD-GWGVAVLVGVPS  274 (354)
Q Consensus       244 ~d~~g~~-------------------------~~~~~~~~~l~~-~~g~~v~~g~~~  274 (354)
                      ++++|..                         ...+.++..|.+ ++|+++.++...
T Consensus        81 VnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~  137 (248)
T d2d1ya1          81 VNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQ  137 (248)
T ss_dssp             EECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGG
T ss_pred             EEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhccccccccccccccccccc
Confidence            9988752                         133345555543 238999888654

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=97.85  E-value=4.2e-05  Score=58.92  Aligned_cols=73  Identities=21%  Similarity=0.228  Sum_probs=56.6

Q ss_pred             hhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh-cCCceEEcCCCCChhHHHHHHHHcCCCc
Q 018529          162 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNGGV  240 (354)
Q Consensus       162 ~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~-lg~~~v~~~~~~~~~~~~~i~~~~~~~~  240 (354)
                      .+...+.++++|||+|+|+++.+++..++..|++++.++.|+.++.+.+.+ ++...+ +...             ...+
T Consensus         9 l~~~~~~~~~~vlIlGaGGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~~~~~~-~~~~-------------~~~~   74 (167)
T d1npya1           9 IEKYHLNKNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAYI-NSLE-------------NQQA   74 (167)
T ss_dssp             HHHTTCCTTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEEE-SCCT-------------TCCC
T ss_pred             HHHcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhhhhhhh-hccc-------------ccch
Confidence            456677788999999999999999999999998889999999998776644 565432 2211             1258


Q ss_pred             cEEEEccc
Q 018529          241 DRSVECTG  248 (354)
Q Consensus       241 dvv~d~~g  248 (354)
                      |+|++|++
T Consensus        75 DliINaTp   82 (167)
T d1npya1          75 DILVNVTS   82 (167)
T ss_dssp             SEEEECSS
T ss_pred             hhheeccc
Confidence            99999975

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.75  E-value=6.9e-05  Score=57.05  Aligned_cols=75  Identities=23%  Similarity=0.264  Sum_probs=57.8

Q ss_pred             CCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHH-HHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEE
Q 018529          166 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFE-EAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSV  244 (354)
Q Consensus       166 ~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~-~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~  244 (354)
                      +--.+.+|||+|+|.+|.+.++.+...|++.++++.|+.+|.+ +++++|.. ++.+.+    +.+.+.     .+|+||
T Consensus        20 ~~l~~~~ilviGaG~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~~-~~~~~~----~~~~l~-----~~Divi   89 (159)
T d1gpja2          20 GSLHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGE-AVRFDE----LVDHLA-----RSDVVV   89 (159)
T ss_dssp             SCCTTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCE-ECCGGG----HHHHHH-----TCSEEE
T ss_pred             CCcccCeEEEECCCHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhcc-cccchh----HHHHhc-----cCCEEE
Confidence            3357889999999999999999999999988999999987755 66778853 333332    444443     489999


Q ss_pred             EcccCh
Q 018529          245 ECTGNI  250 (354)
Q Consensus       245 d~~g~~  250 (354)
                      .|++.+
T Consensus        90 ~atss~   95 (159)
T d1gpja2          90 SATAAP   95 (159)
T ss_dssp             ECCSSS
T ss_pred             EecCCC
Confidence            999875

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.75  E-value=0.00013  Score=60.09  Aligned_cols=103  Identities=17%  Similarity=0.246  Sum_probs=68.7

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh-cCCceEE--cCCCCChhHHHHHHHHcC--CCccE
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFV--NTSEHDRPIQEVIAEMTN--GGVDR  242 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~-lg~~~v~--~~~~~~~~~~~~i~~~~~--~~~dv  242 (354)
                      +|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+.+ ++....+  |..+. +++.+.+++...  ++.|+
T Consensus         5 ~GK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~~~~~~~~~~Dvs~~-~~v~~~~~~~~~~~g~iDi   82 (250)
T d1ydea1           5 AGKVVVVTGGGRGIGAGIVRAFVNSGA-RVVICDKDESGGRALEQELPGAVFILCDVTQE-DDVKTLVSETIRRFGRLDC   82 (250)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCTTEEEEECCTTSH-HHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhcCCCeEEEccCCCH-HHHHHHHHHHHHhcCCCCE
Confidence            5899999987 9999999999999999 89999999998887655 4332222  33222 222222222221  47999


Q ss_pred             EEEcccCh--------------------------HhHHHHHHHhhCCCceEEEEcCC
Q 018529          243 SVECTGNI--------------------------DNMISAFECVHDGWGVAVLVGVP  273 (354)
Q Consensus       243 v~d~~g~~--------------------------~~~~~~~~~l~~~~g~~v~~g~~  273 (354)
                      +++++|..                          ...+.++..|+.++|+++.++..
T Consensus        83 lVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~Ii~isS~  139 (250)
T d1ydea1          83 VVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSL  139 (250)
T ss_dssp             EEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCH
T ss_pred             EEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCCCCCcccccc
Confidence            99988741                          12334555555544899988754

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=97.75  E-value=0.00016  Score=59.54  Aligned_cols=104  Identities=14%  Similarity=0.156  Sum_probs=70.7

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-HhcCCceEEcCCC-CC----hhHHHHHHHHcCCCcc
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTDFVNTSE-HD----RPIQEVIAEMTNGGVD  241 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~~lg~~~v~~~~~-~~----~~~~~~i~~~~~~~~d  241 (354)
                      +|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+ ++++.......-+ .+    +.+.+.+.+.. ++.|
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~-g~iD   82 (253)
T d1hxha_           5 QGKVALVTGGASGVGLEVVKLLLGEGA-KVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRL-GTLN   82 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHH-CSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHh-CCCC
Confidence            5789999987 8999999999999999 899999999887654 5566544332222 12    12333333222 4799


Q ss_pred             EEEEcccCh-------------------------HhHHHHHHHhhCCCceEEEEcCCC
Q 018529          242 RSVECTGNI-------------------------DNMISAFECVHDGWGVAVLVGVPS  274 (354)
Q Consensus       242 vv~d~~g~~-------------------------~~~~~~~~~l~~~~g~~v~~g~~~  274 (354)
                      ++++++|..                         ...+.++..|+..+|+++.++...
T Consensus        83 ilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~  140 (253)
T d1hxha_          83 VLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVS  140 (253)
T ss_dssp             EEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGG
T ss_pred             eEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchh
Confidence            999998852                         134455666665459999998653

>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein Ta0852
species: Thermoplasma acidophilum [TaxId: 2303]

Probab=97.72  E-value=2.5e-05  Score=64.17  Aligned_cols=103  Identities=14%  Similarity=0.203  Sum_probs=70.2

Q ss_pred             hhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCc-EEEEEcCChhhHHHHHh----c-CCceEEcCCCCChhHHHHHHH
Q 018529          161 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGAS-RIIGVDRSSKRFEEAKK----F-GVTDFVNTSEHDRPIQEVIAE  234 (354)
Q Consensus       161 l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~-~vi~v~~~~~~~~~~~~----l-g~~~v~~~~~~~~~~~~~i~~  234 (354)
                      +....+++||++||=.|+|. |.++..+|+..|.. +|++++.+++..+.+++    + +...+-.... +  +.+.   
T Consensus        77 Ii~~l~i~pG~rVLEiG~Gs-G~lt~~la~~v~~~g~V~~vD~~e~~~~~A~~n~~~~~~~~nv~~~~~-D--i~~~---  149 (250)
T d1yb2a1          77 IIMRCGLRPGMDILEVGVGS-GNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRS-D--IADF---  149 (250)
T ss_dssp             ----CCCCTTCEEEEECCTT-SHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECS-C--TTTC---
T ss_pred             HHHHcCCCCcCEEEEeeeeC-cHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHhcCCCceEEEEe-e--eecc---
Confidence            34678999999999999875 78888899887643 99999999998888765    2 2333321111 1  1111   


Q ss_pred             HcCCCccEEEEcccC-hHhHHHHHHHhhCCCceEEEEc
Q 018529          235 MTNGGVDRSVECTGN-IDNMISAFECVHDGWGVAVLVG  271 (354)
Q Consensus       235 ~~~~~~dvv~d~~g~-~~~~~~~~~~l~~~~g~~v~~g  271 (354)
                      +..+.||.||--... ...+..+.+.|+++ |+++++.
T Consensus       150 ~~~~~fD~V~ld~p~p~~~l~~~~~~LKpG-G~lv~~~  186 (250)
T d1yb2a1         150 ISDQMYDAVIADIPDPWNHVQKIASMMKPG-SVATFYL  186 (250)
T ss_dssp             CCSCCEEEEEECCSCGGGSHHHHHHTEEEE-EEEEEEE
T ss_pred             cccceeeeeeecCCchHHHHHHHHHhcCCC-ceEEEEe
Confidence            122379999855544 35789999999997 9998763

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=97.70  E-value=3.2e-05  Score=62.42  Aligned_cols=100  Identities=20%  Similarity=0.298  Sum_probs=70.5

Q ss_pred             hhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcC--CceE-EcCCCCChhHHHHHHHHcC
Q 018529          161 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG--VTDF-VNTSEHDRPIQEVIAEMTN  237 (354)
Q Consensus       161 l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg--~~~v-~~~~~~~~~~~~~i~~~~~  237 (354)
                      +.+...+++|++||-+|+| .|+.++.+|+.. . +|++++.+++..+.+++.-  ...+ +...+....+.      ..
T Consensus        62 ml~~L~l~~g~~VLdIG~G-sGy~ta~La~l~-~-~V~aiE~~~~~~~~A~~~~~~~~nv~~~~~d~~~g~~------~~  132 (224)
T d1vbfa_          62 MLDELDLHKGQKVLEIGTG-IGYYTALIAEIV-D-KVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGYE------EE  132 (224)
T ss_dssp             HHHHTTCCTTCEEEEECCT-TSHHHHHHHHHS-S-EEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCCG------GG
T ss_pred             HHHHhhhcccceEEEecCC-CCHHHHHHHHHh-c-ccccccccHHHHHHHHHHHhcccccccccCchhhcch------hh
Confidence            4577899999999999997 488888888864 4 8999999999888886631  1111 11111110111      11


Q ss_pred             CCccEEEEcccChHhHHHHHHHhhCCCceEEEE
Q 018529          238 GGVDRSVECTGNIDNMISAFECVHDGWGVAVLV  270 (354)
Q Consensus       238 ~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~  270 (354)
                      +.||+|+-+.+.+......++.|+++ |+++..
T Consensus       133 ~pfD~Iiv~~a~~~ip~~l~~qLk~G-GrLV~p  164 (224)
T d1vbfa_         133 KPYDRVVVWATAPTLLCKPYEQLKEG-GIMILP  164 (224)
T ss_dssp             CCEEEEEESSBBSSCCHHHHHTEEEE-EEEEEE
T ss_pred             hhHHHHHhhcchhhhhHHHHHhcCCC-CEEEEE
Confidence            37999998776666677888999997 998874

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=97.56  E-value=0.00029  Score=57.61  Aligned_cols=103  Identities=22%  Similarity=0.330  Sum_probs=68.0

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-HhcCCce---EEcCCCCChhHHHHHHHHc--CCCcc
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTD---FVNTSEHDRPIQEVIAEMT--NGGVD  241 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~~lg~~~---v~~~~~~~~~~~~~i~~~~--~~~~d  241 (354)
                      +|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+ ++++...   ..|..+.+ ++.+.+++..  .++.|
T Consensus         3 ~gK~alITGas~GIG~a~a~~l~~~G~-~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~-~v~~~~~~~~~~~g~iD   80 (243)
T d1q7ba_           3 EGKIALVTGASRGIGRAIAETLAARGA-KVIGTATSENGAQAISDYLGANGKGLMLNVTDPA-SIESVLEKIRAEFGEVD   80 (243)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHH-HHHHHHHHHHHHTCSCS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCCcEEEEEecCHH-HhhhhhhhhhcccCCcc
Confidence            5789999987 9999999999999999 899999999887755 4455432   23333322 2223333322  24799


Q ss_pred             EEEEcccCh-------------------------HhHHHHHHHhhC-CCceEEEEcCC
Q 018529          242 RSVECTGNI-------------------------DNMISAFECVHD-GWGVAVLVGVP  273 (354)
Q Consensus       242 vv~d~~g~~-------------------------~~~~~~~~~l~~-~~g~~v~~g~~  273 (354)
                      ++++++|..                         ...+.+++.|.. ++|+++.++..
T Consensus        81 ilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~  138 (243)
T d1q7ba_          81 ILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSV  138 (243)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCH
T ss_pred             eehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecch
Confidence            999988752                         233445555522 23999999863

>d1o54a_ c.66.1.13 (A:) Hypothetical protein TM0748 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein TM0748
species: Thermotoga maritima [TaxId: 2336]

Probab=97.53  E-value=0.00015  Score=60.08  Aligned_cols=103  Identities=18%  Similarity=0.254  Sum_probs=73.9

Q ss_pred             hhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCc-EEEEEcCChhhHHHHHh----cCC-ceEEcCCCCChhHHHHHHH
Q 018529          161 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGAS-RIIGVDRSSKRFEEAKK----FGV-TDFVNTSEHDRPIQEVIAE  234 (354)
Q Consensus       161 l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~-~vi~v~~~~~~~~~~~~----lg~-~~v~~~~~~~~~~~~~i~~  234 (354)
                      +....+++||++||=.|+|. |.+++.+|+..|.. +|++++.+++..+.+++    +|. +.+... ..+  ..   ..
T Consensus        95 Ii~~l~i~pG~~VLDiG~Gs-G~lt~~lA~~~~~~G~V~~vD~~~~~~~~A~~~~~~~g~~~~v~~~-~~d--~~---~~  167 (266)
T d1o54a_          95 IAMMLDVKEGDRIIDTGVGS-GAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIK-VRD--IS---EG  167 (266)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEE-CCC--GG---GC
T ss_pred             HHHhhCCCCCCEEEECCCCC-CHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhccccCcEEE-ecc--cc---cc
Confidence            45788999999999999876 88888999987632 99999999998888754    554 222211 111  10   11


Q ss_pred             HcCCCccEEEEcccCh-HhHHHHHHHhhCCCceEEEEc
Q 018529          235 MTNGGVDRSVECTGNI-DNMISAFECVHDGWGVAVLVG  271 (354)
Q Consensus       235 ~~~~~~dvv~d~~g~~-~~~~~~~~~l~~~~g~~v~~g  271 (354)
                      +....+|.|+--.+.+ ..++.+.+.|+++ |+++.+.
T Consensus       168 ~~~~~~D~V~~d~p~p~~~l~~~~~~LKpG-G~lv~~~  204 (266)
T d1o54a_         168 FDEKDVDALFLDVPDPWNYIDKCWEALKGG-GRFATVC  204 (266)
T ss_dssp             CSCCSEEEEEECCSCGGGTHHHHHHHEEEE-EEEEEEE
T ss_pred             ccccceeeeEecCCCHHHHHHHHHhhcCCC-CEEEEEe
Confidence            2223689887666654 5789999999997 9998764

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.52  E-value=0.0002  Score=58.59  Aligned_cols=79  Identities=20%  Similarity=0.259  Sum_probs=56.0

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-HhcCCceE-EcCCCCC--hhHHHHHHHHcCCCccEE
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTDF-VNTSEHD--RPIQEVIAEMTNGGVDRS  243 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~~lg~~~v-~~~~~~~--~~~~~~i~~~~~~~~dvv  243 (354)
                      +|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+ +++++..+ .|..+.+  +.+.+.+.+.. +++|++
T Consensus         4 ~gK~~lITGas~GIG~aia~~l~~~G~-~V~~~~r~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~iDil   81 (242)
T d1ulsa_           4 KDKAVLITGAAHGIGRATLELFAKEGA-RLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHL-GRLDGV   81 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHH-SSCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHhc-CCceEE
Confidence            4789999987 8999999999999999 899999999887765 44665433 3333322  12333333322 479999


Q ss_pred             EEcccC
Q 018529          244 VECTGN  249 (354)
Q Consensus       244 ~d~~g~  249 (354)
                      ++++|.
T Consensus        82 VnnAG~   87 (242)
T d1ulsa_          82 VHYAGI   87 (242)
T ss_dssp             EECCCC
T ss_pred             EECCcc
Confidence            999875

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=97.51  E-value=0.0011  Score=54.45  Aligned_cols=80  Identities=19%  Similarity=0.283  Sum_probs=54.3

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH----HhcCCceE---EcCCCCC--hhHHHHHHHHcCC
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTDF---VNTSEHD--RPIQEVIAEMTNG  238 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~----~~lg~~~v---~~~~~~~--~~~~~~i~~~~~~  238 (354)
                      +|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+    ++.|....   .|..+.+  +.+.+++.+..++
T Consensus         7 ~GK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~   85 (259)
T d2ae2a_           7 EGCTALVTGGSRGIGYGIVEELASLGA-SVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHG   85 (259)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHhCC
Confidence            6889999987 9999999988889999 899999998887654    23454322   2332221  1223333333333


Q ss_pred             CccEEEEcccC
Q 018529          239 GVDRSVECTGN  249 (354)
Q Consensus       239 ~~dvv~d~~g~  249 (354)
                      ..|++++++|.
T Consensus        86 ~idilvnnAG~   96 (259)
T d2ae2a_          86 KLNILVNNAGI   96 (259)
T ss_dssp             CCCEEEECCCC
T ss_pred             CceEEEECCce
Confidence            69999999885

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.49  E-value=0.00083  Score=54.76  Aligned_cols=105  Identities=19%  Similarity=0.205  Sum_probs=67.8

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH----HhcCCce-E--EcCCCCChhHHHHHHHHc--CC
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-F--VNTSEHDRPIQEVIAEMT--NG  238 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~----~~lg~~~-v--~~~~~~~~~~~~~i~~~~--~~  238 (354)
                      .|+++||+|+ +++|...+......|+ +|+.+++++++.+.+    ++.|... .  .|..+.+ ...+.++...  .+
T Consensus         6 ~Gkv~lITGas~GIG~~ia~~la~~G~-~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~-~v~~~~~~i~~~~g   83 (244)
T d1yb1a_           6 TGEIVLITGAGHGIGRLTAYEFAKLKS-KLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNRE-DIYSSAKKVKAEIG   83 (244)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHH-HHHHHHHHHHHHTC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHH-HHHHHHHHHHHHcC
Confidence            5899999987 8999998888888899 899999999887654    3355432 2  2333321 2333333322  24


Q ss_pred             CccEEEEcccCh-------------------------HhHHHHHHHhhC-CCceEEEEcCCCC
Q 018529          239 GVDRSVECTGNI-------------------------DNMISAFECVHD-GWGVAVLVGVPSK  275 (354)
Q Consensus       239 ~~dvv~d~~g~~-------------------------~~~~~~~~~l~~-~~g~~v~~g~~~~  275 (354)
                      ..|++++++|..                         ...+.++..+.. ++|+++.++....
T Consensus        84 ~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~  146 (244)
T d1yb1a_          84 DVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAG  146 (244)
T ss_dssp             CCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-
T ss_pred             CCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchh
Confidence            799999998863                         122334444433 3388998887654

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.47  E-value=0.00097  Score=54.87  Aligned_cols=80  Identities=23%  Similarity=0.250  Sum_probs=54.9

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH----hcCCce---EEcCCCCC--hhHHHHHHHHcCC
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD---FVNTSEHD--RPIQEVIAEMTNG  238 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~----~lg~~~---v~~~~~~~--~~~~~~i~~~~~~  238 (354)
                      +|+++||+|+ +++|.+.+..+...|+ +|+.+++++++.+.+.    +.+...   ..|..+.+  +.+.+.+.+..++
T Consensus         7 kgK~alVTGas~GIG~aiA~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g   85 (259)
T d1xq1a_           7 KAKTVLVTGGTKGIGHAIVEEFAGFGA-VIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGG   85 (259)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHhCC
Confidence            5889999987 9999999999999999 8999999988766542    233322   12333221  2233334333345


Q ss_pred             CccEEEEcccC
Q 018529          239 GVDRSVECTGN  249 (354)
Q Consensus       239 ~~dvv~d~~g~  249 (354)
                      .+|++++++|.
T Consensus        86 ~idilvnnAG~   96 (259)
T d1xq1a_          86 KLDILINNLGA   96 (259)
T ss_dssp             CCSEEEEECCC
T ss_pred             Ccccccccccc
Confidence            69999999885

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=97.46  E-value=0.00088  Score=55.18  Aligned_cols=79  Identities=23%  Similarity=0.298  Sum_probs=54.4

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH----HhcCCceE---EcCCCCC--hhHHHHHHHHcCC
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTDF---VNTSEHD--RPIQEVIAEMTNG  238 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~----~~lg~~~v---~~~~~~~--~~~~~~i~~~~~~  238 (354)
                      +|+++||+|+ +++|.+.+..+...|+ +|+.+++++++.+.+    ++.|....   .|..+.+  +.+.+.+.+.. |
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g   81 (260)
T d1zema1           4 NGKVCLVTGAGGNIGLATALRLAEEGT-AIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDF-G   81 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh-C
Confidence            5889999987 9999999999899999 899999999887654    33454322   2333221  12333333322 4


Q ss_pred             CccEEEEcccC
Q 018529          239 GVDRSVECTGN  249 (354)
Q Consensus       239 ~~dvv~d~~g~  249 (354)
                      ++|++++++|.
T Consensus        82 ~iDilVnnaG~   92 (260)
T d1zema1          82 KIDFLFNNAGY   92 (260)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCeehhhhcc
Confidence            79999998874

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.45  E-value=0.00056  Score=55.86  Aligned_cols=78  Identities=19%  Similarity=0.324  Sum_probs=55.0

Q ss_pred             CCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-HhcCCceE--EcCCCCChhHHHHHHHHcCCCccEE
Q 018529          168 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTDF--VNTSEHDRPIQEVIAEMTNGGVDRS  243 (354)
Q Consensus       168 ~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~~lg~~~v--~~~~~~~~~~~~~i~~~~~~~~dvv  243 (354)
                      -+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+ ++++....  .|..+. +++.+.++++  +++|++
T Consensus         5 L~GK~~lITGas~GIG~aia~~la~~G~-~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~d~-~~v~~~~~~~--g~iDil   80 (244)
T d1pr9a_           5 LAGRRVLVTGAGKGIGRGTVQALHATGA-RVVAVSRTQADLDSLVRECPGIEPVCVDLGDW-EATERALGSV--GPVDLL   80 (244)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCTTCH-HHHHHHHTTC--CCCCEE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHhcCCCeEEEEeCCCH-HHHHHHHHHh--CCceEE
Confidence            36899999987 9999999999999999 899999999887755 44443332  333322 1222222222  479999


Q ss_pred             EEcccC
Q 018529          244 VECTGN  249 (354)
Q Consensus       244 ~d~~g~  249 (354)
                      ++++|.
T Consensus        81 VnnAg~   86 (244)
T d1pr9a_          81 VNNAAV   86 (244)
T ss_dssp             EECCCC
T ss_pred             Eecccc
Confidence            998875

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=97.44  E-value=0.00025  Score=55.66  Aligned_cols=77  Identities=21%  Similarity=0.245  Sum_probs=55.4

Q ss_pred             CCCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh-----cCCc-eEEcCCCCChhHHHHHHHHcCC
Q 018529          166 KPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-----FGVT-DFVNTSEHDRPIQEVIAEMTNG  238 (354)
Q Consensus       166 ~~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~-----lg~~-~v~~~~~~~~~~~~~i~~~~~~  238 (354)
                      .--+|+++||+|+ |++|...+..+...|+ +|+.++++.++.+.+.+     .... ...+..+     .+.+++.. +
T Consensus        19 ~~l~gK~vlItGasgGIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~-----~~~~~~~~-~   91 (191)
T d1luaa1          19 GSVKGKKAVVLAGTGPVGMRSAALLAGEGA-EVVLCGRKLDKAQAAADSVNKRFKVNVTAAETAD-----DASRAEAV-K   91 (191)
T ss_dssp             SCCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCS-----HHHHHHHT-T
T ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHhhcc-chhhcccchHHHHHHHHHHHhccchhhhhhhccc-----HHHHHHHh-c
Confidence            3458899999997 9999999999999999 89999999988766533     2221 2233332     12344443 3


Q ss_pred             CccEEEEcccC
Q 018529          239 GVDRSVECTGN  249 (354)
Q Consensus       239 ~~dvv~d~~g~  249 (354)
                      ++|++|+++|.
T Consensus        92 ~iDilin~Ag~  102 (191)
T d1luaa1          92 GAHFVFTAGAI  102 (191)
T ss_dssp             TCSEEEECCCT
T ss_pred             CcCeeeecCcc
Confidence            68999999874

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.44  E-value=0.00032  Score=57.26  Aligned_cols=78  Identities=19%  Similarity=0.259  Sum_probs=53.8

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-HhcCCceEEcCCCCChh-HHHHHHHHcCCCccEEEE
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTDFVNTSEHDRP-IQEVIAEMTNGGVDRSVE  245 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~~lg~~~v~~~~~~~~~-~~~~i~~~~~~~~dvv~d  245 (354)
                      +|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+ ++++....+..+-.+.+ +.+.++++  |+.|++++
T Consensus         4 ~GK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~--g~iDilVn   80 (242)
T d1cyda_           4 SGLRALVTGAGKGIGRDTVKALHASGA-KVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGI--GPVDLLVN   80 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTC--CCCSEEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHc--CCCeEEEE
Confidence            5899999987 9999999999999999 899999998887655 44433222222222222 22222222  47999999


Q ss_pred             cccC
Q 018529          246 CTGN  249 (354)
Q Consensus       246 ~~g~  249 (354)
                      ++|.
T Consensus        81 nAg~   84 (242)
T d1cyda_          81 NAAL   84 (242)
T ss_dssp             CCCC
T ss_pred             CCcc
Confidence            9874

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.43  E-value=0.00042  Score=53.22  Aligned_cols=77  Identities=16%  Similarity=0.169  Sum_probs=54.1

Q ss_pred             hhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh-cC---CceEEcCCCCChhHHHHHHHHc
Q 018529          161 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FG---VTDFVNTSEHDRPIQEVIAEMT  236 (354)
Q Consensus       161 l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~-lg---~~~v~~~~~~~~~~~~~i~~~~  236 (354)
                      |.+..-..+|++|||+|+|+.+.+++..+..+|. +|+.+.|+.+|.+.+.+ +.   ....+...+           ..
T Consensus         9 l~~~~~~~~~k~vlIlGaGGaarai~~al~~~g~-~i~I~nRt~~ka~~l~~~~~~~~~~~~~~~~~-----------~~   76 (170)
T d1nyta1           9 LERLSFIRPGLRILLIGAGGASRGVLLPLLSLDC-AVTITNRTVSRAEELAKLFAHTGSIQALSMDE-----------LE   76 (170)
T ss_dssp             HHHHTCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHHTGGGSSEEECCSGG-----------GT
T ss_pred             HHHcCCCCCCCEEEEECCcHHHHHHHHHhcccce-EEEeccchHHHHHHHHHHHhhccccccccccc-----------cc
Confidence            4333334678999999999999999999999999 79999999988776544 32   212221111           11


Q ss_pred             CCCccEEEEcccC
Q 018529          237 NGGVDRSVECTGN  249 (354)
Q Consensus       237 ~~~~dvv~d~~g~  249 (354)
                      ...+|++++|++.
T Consensus        77 ~~~~dliIN~Tp~   89 (170)
T d1nyta1          77 GHEFDLIINATSS   89 (170)
T ss_dssp             TCCCSEEEECCSC
T ss_pred             ccccceeeccccc
Confidence            1368999999865

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.43  E-value=0.00092  Score=54.76  Aligned_cols=103  Identities=24%  Similarity=0.352  Sum_probs=67.5

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-----HhcCCceE---EcCCCCC--hhHHHHHHHHcC
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-----KKFGVTDF---VNTSEHD--RPIQEVIAEMTN  237 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-----~~lg~~~v---~~~~~~~--~~~~~~i~~~~~  237 (354)
                      +|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+     ++.|....   .|..+.+  +.+.+++.+.. 
T Consensus         4 ~gK~~lITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~-   81 (251)
T d1vl8a_           4 RGRVALVTGGSRGLGFGIAQGLAEAGC-SVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKF-   81 (251)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHc-
Confidence            4789999987 9999999999999999 899999998775432     34565432   2333321  12333333322 


Q ss_pred             CCccEEEEcccCh-------------------------HhHHHHHHHhhC-CCceEEEEcCC
Q 018529          238 GGVDRSVECTGNI-------------------------DNMISAFECVHD-GWGVAVLVGVP  273 (354)
Q Consensus       238 ~~~dvv~d~~g~~-------------------------~~~~~~~~~l~~-~~g~~v~~g~~  273 (354)
                      |++|++++++|..                         ...+.++..|.. ++|+++.++..
T Consensus        82 g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~  143 (251)
T d1vl8a_          82 GKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSL  143 (251)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCG
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccc
Confidence            4799999998852                         233445555643 23789988753

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=97.43  E-value=0.00071  Score=55.55  Aligned_cols=79  Identities=24%  Similarity=0.301  Sum_probs=54.7

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-HhcCCceE---EcCCCCC--hhHHHHHHHHcCCCcc
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTDF---VNTSEHD--RPIQEVIAEMTNGGVD  241 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~~lg~~~v---~~~~~~~--~~~~~~i~~~~~~~~d  241 (354)
                      +|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+ ++++....   .|..+.+  +.+.+.+.+.. +++|
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~iD   81 (254)
T d1hdca_           4 SGKTVIITGGARGLGAEAARQAVAAGA-RVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEF-GSVD   81 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCceEEEEcccCCHHHHHHHHHHHHHHc-CCcc
Confidence            5889999987 8999999998888999 899999998887654 55654322   2333221  12333332222 4799


Q ss_pred             EEEEcccC
Q 018529          242 RSVECTGN  249 (354)
Q Consensus       242 vv~d~~g~  249 (354)
                      ++++++|.
T Consensus        82 ilVnnAg~   89 (254)
T d1hdca_          82 GLVNNAGI   89 (254)
T ss_dssp             EEEECCCC
T ss_pred             EEEecCcc
Confidence            99999875

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=97.42  E-value=0.00062  Score=56.07  Aligned_cols=80  Identities=21%  Similarity=0.332  Sum_probs=57.0

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH----HhcCCceE---EcCCCCC--hhHHHHHHHHcCC
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTDF---VNTSEHD--RPIQEVIAEMTNG  238 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~----~~lg~~~v---~~~~~~~--~~~~~~i~~~~~~  238 (354)
                      +|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+    ++.+....   .|..+.+  +.+.+.+.+..++
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~-~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~g   83 (258)
T d1ae1a_           5 KGTTALVTGGSKGIGYAIVEELAGLGA-RVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDG   83 (258)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhCC
Confidence            6899999987 9999999999999999 899999998775543    44555432   2333322  2234445555555


Q ss_pred             CccEEEEcccC
Q 018529          239 GVDRSVECTGN  249 (354)
Q Consensus       239 ~~dvv~d~~g~  249 (354)
                      ..|++++++|.
T Consensus        84 ~idilinnag~   94 (258)
T d1ae1a_          84 KLNILVNNAGV   94 (258)
T ss_dssp             CCCEEEECCCC
T ss_pred             CcEEEeccccc
Confidence            79999998885

>d1kpia_ c.66.1.18 (A:) CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA2
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.42  E-value=0.00044  Score=57.94  Aligned_cols=104  Identities=17%  Similarity=0.183  Sum_probs=72.6

Q ss_pred             hhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH----hcCCceEEcCCCCChhHHHHHHH
Q 018529          159 GATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTDFVNTSEHDRPIQEVIAE  234 (354)
Q Consensus       159 ~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~----~lg~~~v~~~~~~~~~~~~~i~~  234 (354)
                      .-+.+++++++|++||=+|||- |.++..+|+..|+ +|++++.+++..++++    +.|....+.....+  .     .
T Consensus        51 ~~~~~~l~l~~G~~VLDiGCG~-G~~~~~~a~~~g~-~v~git~s~~q~~~a~~~~~~~~l~~~v~~~~~d--~-----~  121 (291)
T d1kpia_          51 KLALDKLNLEPGMTLLDIGCGW-GSTMRHAVAEYDV-NVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQG--W-----E  121 (291)
T ss_dssp             HHHHHTTCCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHSCCSSCEEEEECC--G-----G
T ss_pred             HHHHHhcCCCCCCEEEEecCcc-hHHHHHHHHhcCc-ceeeccchHHHHHHHHHHHHhhccchhhhhhhhc--c-----c
Confidence            3356889999999999999974 5567889999999 9999999999876654    35553222221111  1     1


Q ss_pred             HcCCCccEEEE-----cccC----------hHhHHHHHHHhhCCCceEEEEcC
Q 018529          235 MTNGGVDRSVE-----CTGN----------IDNMISAFECVHDGWGVAVLVGV  272 (354)
Q Consensus       235 ~~~~~~dvv~d-----~~g~----------~~~~~~~~~~l~~~~g~~v~~g~  272 (354)
                      ...+.||.|+.     .++.          +..++.+.+.|+|+ |++++-..
T Consensus       122 ~~~~~fD~i~sie~~eH~~~~~~~~~~~~~~~~f~~i~~~Lkpg-G~~~l~~i  173 (291)
T d1kpia_         122 EFDEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDD-GRMLLHTI  173 (291)
T ss_dssp             GCCCCCSEEEEESCGGGTTCCSSCCSTTHHHHHHHHHHHTSCTT-CEEEEEEE
T ss_pred             ccccccceEeechhHHhcchhhhhhHHHHHHHHHHHHHHhCCCC-CceEEEEE
Confidence            22357998875     2332          25688899999997 99886543

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.40  E-value=0.0022  Score=45.25  Aligned_cols=94  Identities=14%  Similarity=-0.031  Sum_probs=64.1

Q ss_pred             CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCC--hhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEc
Q 018529          169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS--SKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  246 (354)
Q Consensus       169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~--~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~  246 (354)
                      .|.+|||+|+|.+|..-++.+...|+ .|++++..  ++-..++++-+....- -.-...++         .++++|+.+
T Consensus        11 ~~k~vlVvG~G~va~~ka~~ll~~ga-~v~v~~~~~~~~~~~~~~~~~i~~~~-~~~~~~dl---------~~~~lv~~a   79 (113)
T d1pjqa1          11 RDRDCLIVGGGDVAERKARLLLEAGA-RLTVNALTFIPQFTVWANEGMLTLVE-GPFDETLL---------DSCWLAIAA   79 (113)
T ss_dssp             BTCEEEEECCSHHHHHHHHHHHHTTB-EEEEEESSCCHHHHHHHTTTSCEEEE-SSCCGGGG---------TTCSEEEEC
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeccCChHHHHHHhcCCceeec-cCCCHHHh---------CCCcEEeec
Confidence            47899999999999999999999999 67766543  3334444433333222 11111111         268999999


Q ss_pred             ccChHhHHHHHHHhhCCCceEEEEcCCC
Q 018529          247 TGNIDNMISAFECVHDGWGVAVLVGVPS  274 (354)
Q Consensus       247 ~g~~~~~~~~~~~l~~~~g~~v~~g~~~  274 (354)
                      ++.++.-.......+.. |..|.+....
T Consensus        80 t~d~~~n~~i~~~a~~~-~ilVNv~D~p  106 (113)
T d1pjqa1          80 TDDDTVNQRVSDAAESR-RIFCNVVDAP  106 (113)
T ss_dssp             CSCHHHHHHHHHHHHHT-TCEEEETTCT
T ss_pred             CCCHHHHHHHHHHHHHc-CCEEEeCCCh
Confidence            99866666777788886 9998876543

>d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical Protein YjhP
domain: Hypothetical Protein YjhP
species: Escherichia coli [TaxId: 562]

Probab=97.40  E-value=9.5e-05  Score=60.65  Aligned_cols=103  Identities=20%  Similarity=0.230  Sum_probs=71.0

Q ss_pred             hhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCce-E-EcCCCCChhHHHHH
Q 018529          159 GATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD-F-VNTSEHDRPIQEVI  232 (354)
Q Consensus       159 ~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~~-v-~~~~~~~~~~~~~i  232 (354)
                      ..+....+++||++||=+|||. |..+..+++..|+ +|++++.+++..+.+++    .|... + +...+    +.+ +
T Consensus        23 ~~l~~~~~l~pg~~VLDiGCG~-G~~~~~la~~~~~-~v~GvD~s~~~~~~ar~~~~~~gl~~~v~~~~~d----~~~-~   95 (245)
T d1nkva_          23 ATLGRVLRMKPGTRILDLGSGS-GEMLCTWARDHGI-TGTGIDMSSLFTAQAKRRAEELGVSERVHFIHND----AAG-Y   95 (245)
T ss_dssp             HHHHHHTCCCTTCEEEEETCTT-CHHHHHHHHHTCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESC----CTT-C
T ss_pred             HHHHHHcCCCCCCEEEEEcCCC-CHHHHHHHHhcCC-EEEEEecccchhhHHHHHHHHhhccccchhhhhH----Hhh-c
Confidence            3456788999999999999864 5667788888898 99999999988776654    45431 1 11111    111 0


Q ss_pred             HHHcCCCccEEEEcc------cChHhHHHHHHHhhCCCceEEEEc
Q 018529          233 AEMTNGGVDRSVECT------GNIDNMISAFECVHDGWGVAVLVG  271 (354)
Q Consensus       233 ~~~~~~~~dvv~d~~------g~~~~~~~~~~~l~~~~g~~v~~g  271 (354)
                        ...+.||+|+..-      .-...+..+.+.|+|+ |++++..
T Consensus        96 --~~~~~fD~v~~~~~~~~~~d~~~~l~~~~r~LkPG-G~l~i~~  137 (245)
T d1nkva_          96 --VANEKCDVAACVGATWIAGGFAGAEELLAQSLKPG-GIMLIGE  137 (245)
T ss_dssp             --CCSSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEE-EEEEEEE
T ss_pred             --cccCceeEEEEEehhhccCCHHHHHHHHHHHcCcC-cEEEEEe
Confidence              1223899998632      1245778888999997 9988753

>d1kpga_ c.66.1.18 (A:) CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA1
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.39  E-value=0.00071  Score=56.45  Aligned_cols=102  Identities=16%  Similarity=0.119  Sum_probs=71.1

Q ss_pred             hhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCceEEcCCCCChhHHHHHHHH
Q 018529          160 ATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEM  235 (354)
Q Consensus       160 ~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~~  235 (354)
                      .+.++.++++|++||=+|||- |..++.+|+..|+ +|++++.+++..+++++    .|...-+.....+  +    +. 
T Consensus        53 ~~~~~l~l~~G~~VLDiGCG~-G~~a~~~a~~~g~-~v~git~s~~Q~~~a~~~~~~~g~~~~v~~~~~d--~----~~-  123 (285)
T d1kpga_          53 LALGKLGLQPGMTLLDVGCGW-GATMMRAVEKYDV-NVVGLTLSKNQANHVQQLVANSENLRSKRVLLAG--W----EQ-  123 (285)
T ss_dssp             HHHTTTTCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESC--G----GG-
T ss_pred             HHHHHcCCCCCCEEEEecCcc-hHHHHHHHhcCCc-ceEEEeccHHHHHHHHHHHHhhhhhhhhHHHHhh--h----hc-
Confidence            356788999999999999974 7778899999999 99999999998887755    3321111111111  1    11 


Q ss_pred             cCCCccEEEE-----cccC---hHhHHHHHHHhhCCCceEEEEc
Q 018529          236 TNGGVDRSVE-----CTGN---IDNMISAFECVHDGWGVAVLVG  271 (354)
Q Consensus       236 ~~~~~dvv~d-----~~g~---~~~~~~~~~~l~~~~g~~v~~g  271 (354)
                      .++.+|.|+.     .++.   ...+..+.+.|+++ |++++..
T Consensus       124 ~~~~fD~i~si~~~eh~~~~~~~~~~~~~~r~Lkpg-G~~~l~~  166 (285)
T d1kpga_         124 FDEPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPAD-GVMLLHT  166 (285)
T ss_dssp             CCCCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTT-CEEEEEE
T ss_pred             ccccccceeeehhhhhcCchhHHHHHHHHHhhcCCC-CcEEEEE
Confidence            1247888764     3333   24678899999997 9988644

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.39  E-value=0.00037  Score=57.03  Aligned_cols=79  Identities=18%  Similarity=0.208  Sum_probs=57.7

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcc
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  247 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~  247 (354)
                      +|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+.+.........+-...+..+...+.. ++.|+++++.
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~-~Vi~~~r~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-~~id~lVn~a   82 (245)
T d2ag5a1           5 DGKVIILTAAAQGIGQAAALAFAREGA-KVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEV-ERLDVLFNVA   82 (245)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHC-SCCSEEEECC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhccCCceeeeecccccccccccccc-ccceeEEecc
Confidence            5789999987 9999999999999999 99999999988877666433333333333334555544433 3799999998


Q ss_pred             cC
Q 018529          248 GN  249 (354)
Q Consensus       248 g~  249 (354)
                      |.
T Consensus        83 g~   84 (245)
T d2ag5a1          83 GF   84 (245)
T ss_dssp             CC
T ss_pred             cc
Confidence            75

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.39  E-value=8.4e-05  Score=60.06  Aligned_cols=97  Identities=15%  Similarity=0.184  Sum_probs=67.2

Q ss_pred             CCCCCCeEEEEcCChhHHHHHHHHHHcCC-cEEEEEcCChhhHHHHHh----cCC-----ceE-EcCCCCChhHHHHHHH
Q 018529          166 KPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKK----FGV-----TDF-VNTSEHDRPIQEVIAE  234 (354)
Q Consensus       166 ~~~~~~~vlI~G~g~~G~~a~~~a~~~g~-~~vi~v~~~~~~~~~~~~----lg~-----~~v-~~~~~~~~~~~~~i~~  234 (354)
                      .+++|++||-+|+|. |+.++.+|+..|. .+|++++.+++-.+.+++    .+.     ..+ +...+..    +..  
T Consensus        73 ~l~~g~~VLdiG~Gs-Gy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~gD~~----~~~--  145 (224)
T d1i1na_          73 QLHEGAKALDVGSGS-GILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGR----MGY--  145 (224)
T ss_dssp             TSCTTCEEEEETCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGG----GCC--
T ss_pred             ccCCCCeEEEecCCC-CHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEEeecc----ccc--
Confidence            789999999999974 8888899998763 389999999988776643    222     111 1111100    000  


Q ss_pred             HcCCCccEEEEcccChHhHHHHHHHhhCCCceEEEE
Q 018529          235 MTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLV  270 (354)
Q Consensus       235 ~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~  270 (354)
                      ...+.||+|+.+...+...+..++.|+++ |+++..
T Consensus       146 ~~~~~fD~I~~~~~~~~ip~~l~~~LkpG-G~LV~p  180 (224)
T d1i1na_         146 AEEAPYDAIHVGAAAPVVPQALIDQLKPG-GRLILP  180 (224)
T ss_dssp             GGGCCEEEEEECSBBSSCCHHHHHTEEEE-EEEEEE
T ss_pred             chhhhhhhhhhhcchhhcCHHHHhhcCCC-cEEEEE
Confidence            01137999998877666778899999997 998863

>d2fk8a1 c.66.1.18 (A:22-301) Methoxy mycolic acid synthase 4, Mma4 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Methoxy mycolic acid synthase 4, Mma4
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.34  E-value=0.00096  Score=55.55  Aligned_cols=104  Identities=15%  Similarity=0.168  Sum_probs=71.2

Q ss_pred             hhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCceEEcCCCCChhHHHHHH
Q 018529          158 LGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIA  233 (354)
Q Consensus       158 ~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~  233 (354)
                      +..+.+..++++|++||=+|||- |.++..+++..|+ .|++++.+++..+++++    .|....+.....+  .    .
T Consensus        41 ~~~~~~~l~l~~g~~VLDiGCG~-G~~a~~~a~~~g~-~v~gi~ls~~q~~~a~~~~~~~~l~~~~~~~~~d--~----~  112 (280)
T d2fk8a1          41 VDLNLDKLDLKPGMTLLDIGCGW-GTTMRRAVERFDV-NVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQG--W----E  112 (280)
T ss_dssp             HHHHHTTSCCCTTCEEEEESCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESC--G----G
T ss_pred             HHHHHHHcCCCCCCEEEEecCCc-hHHHHHHHHhCce-eEEEecchHHHHHHHHHHHHhhccccchhhhhhh--h----h
Confidence            34467788999999999999974 4556778888899 99999999999887754    3442111111111  1    1


Q ss_pred             HHcCCCccEEEE-----cccC---hHhHHHHHHHhhCCCceEEEEc
Q 018529          234 EMTNGGVDRSVE-----CTGN---IDNMISAFECVHDGWGVAVLVG  271 (354)
Q Consensus       234 ~~~~~~~dvv~d-----~~g~---~~~~~~~~~~l~~~~g~~v~~g  271 (354)
                       ...+.+|.|+.     .++.   +..++.+.+.|+|+ |++++-.
T Consensus       113 -~~~~~fD~i~si~~~eh~~~~~~~~~f~~i~~~Lkpg-G~~~i~~  156 (280)
T d2fk8a1         113 -DFAEPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPAD-GRMTVQS  156 (280)
T ss_dssp             -GCCCCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTT-CEEEEEE
T ss_pred             -hhccchhhhhHhhHHHHhhhhhHHHHHHHHHhccCCC-ceEEEEE
Confidence             12347898864     2332   24688899999997 9988654

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.32  E-value=0.0011  Score=50.90  Aligned_cols=96  Identities=10%  Similarity=0.039  Sum_probs=63.6

Q ss_pred             CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh-cCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcc
Q 018529          169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  247 (354)
Q Consensus       169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~-lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~  247 (354)
                      ++++|||+|+|.+|...++.+...|. .|++++++.++.+.+.+ ++...+..........   ..... ...|+++.++
T Consensus         1 ~~K~IliiGaG~~G~~~a~~L~~~g~-~V~v~dr~~~~a~~l~~~~~~~~~~~~~~~~~~~---~~~~i-~~~~~~i~~~   75 (182)
T d1e5qa1           1 ATKSVLMLGSGFVTRPTLDVLTDSGI-KVTVACRTLESAKKLSAGVQHSTPISLDVNDDAA---LDAEV-AKHDLVISLI   75 (182)
T ss_dssp             CCCEEEEECCSTTHHHHHHHHHTTTC-EEEEEESCHHHHHHHHTTCTTEEEEECCTTCHHH---HHHHH-TTSSEEEECS
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEECChHHHHHHHhcccccccccccccchhh---hHhhh-hccceeEeec
Confidence            36899999999999999998888898 89999999999887755 4443333222222111   11111 2478888887


Q ss_pred             cChHhHHHHHHHhhCCCceEEEE
Q 018529          248 GNIDNMISAFECVHDGWGVAVLV  270 (354)
Q Consensus       248 g~~~~~~~~~~~l~~~~g~~v~~  270 (354)
                      +..........++..+ ..++..
T Consensus        76 ~~~~~~~~~~~~~~~~-~~~~~~   97 (182)
T d1e5qa1          76 PYTFHATVIKSAIRQK-KHVVTT   97 (182)
T ss_dssp             CGGGHHHHHHHHHHHT-CEEECS
T ss_pred             cchhhhHHHHHHHhhc-cceeec
Confidence            7655555555566664 555443

>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=97.27  E-value=8e-05  Score=60.04  Aligned_cols=100  Identities=17%  Similarity=0.238  Sum_probs=63.9

Q ss_pred             cCCCCCCeEEEEcCChhHHHHHHHHHHc---CC---cEEEEEcCChhhHHHHHh---------cCCceEEcCCCCChhHH
Q 018529          165 AKPERGSSVAVFGLGAVGLAAAEGARIA---GA---SRIIGVDRSSKRFEEAKK---------FGVTDFVNTSEHDRPIQ  229 (354)
Q Consensus       165 ~~~~~~~~vlI~G~g~~G~~a~~~a~~~---g~---~~vi~v~~~~~~~~~~~~---------lg~~~v~~~~~~~~~~~  229 (354)
                      ..++++++||.+|+|. |+.++.+++..   |.   .+|++++.+++-.+++++         ++...+.....+   ..
T Consensus        76 ~~l~~g~~VLeIGtGs-GY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~~~~nv~~~~~d---~~  151 (223)
T d1r18a_          76 DHLKPGARILDVGSGS-GYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGD---GR  151 (223)
T ss_dssp             TTCCTTCEEEEESCTT-SHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESC---GG
T ss_pred             hccCCCCeEEEecCCC-CHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhcCccEEEEEecc---cc
Confidence            3789999999998753 66665665554   42   279999999887766643         122222211111   10


Q ss_pred             HHHHHHcCCCccEEEEcccChHhHHHHHHHhhCCCceEEE-Ec
Q 018529          230 EVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVL-VG  271 (354)
Q Consensus       230 ~~i~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~-~g  271 (354)
                      +..  ...+.||.|+.+.+-+..-+..++.|+++ |+++. ++
T Consensus       152 ~~~--~~~~~fD~Iiv~~a~~~~p~~l~~~Lk~g-G~lV~pvg  191 (223)
T d1r18a_         152 KGY--PPNAPYNAIHVGAAAPDTPTELINQLASG-GRLIVPVG  191 (223)
T ss_dssp             GCC--GGGCSEEEEEECSCBSSCCHHHHHTEEEE-EEEEEEES
T ss_pred             ccc--ccccceeeEEEEeechhchHHHHHhcCCC-cEEEEEEe
Confidence            000  11137999998877666667889999997 99876 44

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.25  E-value=7.2e-05  Score=61.07  Aligned_cols=99  Identities=17%  Similarity=0.250  Sum_probs=62.8

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCC----hhHHHHHHHHcCC-CccE
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHD----RPIQEVIAEMTNG-GVDR  242 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~----~~~~~~i~~~~~~-~~dv  242 (354)
                      +|++|||+|+ |++|.+.++.....|+ +|+.+++++++..     ...........+    +.+.+.+.+.... ++|+
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~-~V~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD~   74 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNW-WVASIDVVENEEA-----SASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDA   74 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESSCCTTS-----SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCccccc-----cccceeecccCcHHHHHHHHHHHHHHhCCCCceE
Confidence            4789999987 9999999999999999 8988877654321     111111111111    1123333333333 7999


Q ss_pred             EEEcccCh--------------------------HhHHHHHHHhhCCCceEEEEcCCC
Q 018529          243 SVECTGNI--------------------------DNMISAFECVHDGWGVAVLVGVPS  274 (354)
Q Consensus       243 v~d~~g~~--------------------------~~~~~~~~~l~~~~g~~v~~g~~~  274 (354)
                      +++++|..                          .....+.+.++++ |++++++...
T Consensus        75 lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~-G~Iv~isS~~  131 (236)
T d1dhra_          75 ILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEG-GLLTLAGAKA  131 (236)
T ss_dssp             EEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEECCGG
T ss_pred             EEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccc-cceeEEccHH
Confidence            99998741                          1223345556776 9999998653

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.24  E-value=0.0011  Score=54.52  Aligned_cols=79  Identities=25%  Similarity=0.396  Sum_probs=54.3

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH----HhcCC-ceEE----cCCCCC--hhHHHHHHHHc
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGV-TDFV----NTSEHD--RPIQEVIAEMT  236 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~----~~lg~-~~v~----~~~~~~--~~~~~~i~~~~  236 (354)
                      +|+++||+|+ +++|.+.+..+...|+ +|+.+++++++.+.+    ++.+. ..++    |..+.+  +.+.+.+.+..
T Consensus         9 k~Kv~lITGas~GIG~aiA~~la~~G~-~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~   87 (257)
T d1xg5a_           9 RDRLALVTGASGGIGAAVARALVQQGL-KVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQH   87 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhc
Confidence            5789999987 9999999998889999 899999999886654    33332 1222    333321  12333333332


Q ss_pred             CCCccEEEEcccC
Q 018529          237 NGGVDRSVECTGN  249 (354)
Q Consensus       237 ~~~~dvv~d~~g~  249 (354)
                       ++.|++++++|.
T Consensus        88 -g~iD~lVnnAg~   99 (257)
T d1xg5a_          88 -SGVDICINNAGL   99 (257)
T ss_dssp             -CCCSEEEECCCC
T ss_pred             -CCCCEEEecccc
Confidence             479999999875

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=97.23  E-value=0.0017  Score=53.13  Aligned_cols=79  Identities=24%  Similarity=0.306  Sum_probs=53.1

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH----HhcCCceE---EcCCCCChhHHHHHHHHc--CC
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTDF---VNTSEHDRPIQEVIAEMT--NG  238 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~----~~lg~~~v---~~~~~~~~~~~~~i~~~~--~~  238 (354)
                      .++.+||+|+ +++|.+.+..+...|+ +|+.+++++++.+.+    ++.|....   .|..+. .++.+.+++..  .|
T Consensus         9 enKvalITGas~GIG~a~a~~la~~Ga-~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~-~~v~~~~~~~~~~~g   86 (251)
T d2c07a1           9 ENKVALVTGAGRGIGREIAKMLAKSVS-HVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKK-EEISEVINKILTEHK   86 (251)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSS-EEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCH-HHHHHHHHHHHHHCS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCH-HHHHHHHHHHHHhcC
Confidence            4678899987 9999999888888999 899999998876654    34554322   233322 12222232221  24


Q ss_pred             CccEEEEcccC
Q 018529          239 GVDRSVECTGN  249 (354)
Q Consensus       239 ~~dvv~d~~g~  249 (354)
                      ++|++++++|.
T Consensus        87 ~iDilvnnag~   97 (251)
T d2c07a1          87 NVDILVNNAGI   97 (251)
T ss_dssp             CCCEEEECCCC
T ss_pred             Cceeeeecccc
Confidence            89999998875

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=97.23  E-value=0.0017  Score=52.72  Aligned_cols=79  Identities=24%  Similarity=0.395  Sum_probs=55.6

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-HhcCCceE---EcCCCCChhHHHHHHHHcC--CCcc
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTDF---VNTSEHDRPIQEVIAEMTN--GGVD  241 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~~lg~~~v---~~~~~~~~~~~~~i~~~~~--~~~d  241 (354)
                      .|+++||+|+ +++|.+.++-+...|+ +|+.+.+++++.+.+ ++++....   .|..+. .+..+.+++...  +++|
T Consensus         4 ~gK~alItGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~-~~i~~~~~~i~~~~g~iD   81 (241)
T d2a4ka1           4 SGKTILVTGAASGIGRAALDLFAREGA-SLVAVDREERLLAEAVAALEAEAIAVVADVSDP-KAVEAVFAEALEEFGRLH   81 (241)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTCCSSEEEEECCTTSH-HHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCCceEEEEecCCCH-HHHHHHHHHHHHHhCCcc
Confidence            6899999987 8999999999999999 999999999876654 55775432   233222 223333333222  4799


Q ss_pred             EEEEcccC
Q 018529          242 RSVECTGN  249 (354)
Q Consensus       242 vv~d~~g~  249 (354)
                      +.++++|.
T Consensus        82 iLinnAg~   89 (241)
T d2a4ka1          82 GVAHFAGV   89 (241)
T ss_dssp             EEEEGGGG
T ss_pred             Eecccccc
Confidence            99998874

>d1i9ga_ c.66.1.13 (A:) Probable methyltransferase Rv2118c {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Probable methyltransferase Rv2118c
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.22  E-value=0.00075  Score=55.47  Aligned_cols=104  Identities=19%  Similarity=0.268  Sum_probs=72.8

Q ss_pred             hhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCc-EEEEEcCChhhHHHHHh----c---CCceEEcCCCCChhHHHHH
Q 018529          161 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGAS-RIIGVDRSSKRFEEAKK----F---GVTDFVNTSEHDRPIQEVI  232 (354)
Q Consensus       161 l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~-~vi~v~~~~~~~~~~~~----l---g~~~v~~~~~~~~~~~~~i  232 (354)
                      +....+++||++||=.|+|. |.+++.+|+..|.+ +|++++.+++..+.+++    +   ..+.+..... +  ..+  
T Consensus        88 Ii~~l~i~PG~~VLE~G~Gs-G~lt~~La~~vgp~G~V~~~d~~~~~~~~Ar~n~~~~~~~~~~nv~~~~~-d--~~~--  161 (264)
T d1i9ga_          88 IVHEGDIFPGARVLEAGAGS-GALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVS-D--LAD--  161 (264)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECS-C--GGG--
T ss_pred             HHHHhCCCCCCEEEecCcCC-cHHHHHHHHhhCCCcEEEEecCCHHHHHHHHHhhhhhccCCCceEEEEec-c--ccc--
Confidence            45678999999999999875 88899999988743 99999999999888765    2   1222221111 1  111  


Q ss_pred             HHHcCCCccEEEEcccCh-HhHHHHHHHhhCCCceEEEEc
Q 018529          233 AEMTNGGVDRSVECTGNI-DNMISAFECVHDGWGVAVLVG  271 (354)
Q Consensus       233 ~~~~~~~~dvv~d~~g~~-~~~~~~~~~l~~~~g~~v~~g  271 (354)
                      ..+..+.||.||--...+ ..++.+.+.|+++ |+++.+-
T Consensus       162 ~~~~~~~fDaV~ldlp~P~~~l~~~~~~LkpG-G~lv~~~  200 (264)
T d1i9ga_         162 SELPDGSVDRAVLDMLAPWEVLDAVSRLLVAG-GVLMVYV  200 (264)
T ss_dssp             CCCCTTCEEEEEEESSCGGGGHHHHHHHEEEE-EEEEEEE
T ss_pred             ccccCCCcceEEEecCCHHHHHHHHHhccCCC-CEEEEEe
Confidence            012234799887555544 5788999999997 9988763

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.22  E-value=0.00096  Score=55.27  Aligned_cols=80  Identities=18%  Similarity=0.233  Sum_probs=52.8

Q ss_pred             CCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh-----cCCce-EEcCCCCChhHH----HHHHHHc
Q 018529          168 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-----FGVTD-FVNTSEHDRPIQ----EVIAEMT  236 (354)
Q Consensus       168 ~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~-----lg~~~-v~~~~~~~~~~~----~~i~~~~  236 (354)
                      -+|+++||+|+ +++|.+.+..+...|+ +|+.+++++++++.+.+     .+... .+.....+....    +.+.+. 
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G~-~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~-   89 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMGA-HVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKL-   89 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHH-
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHH-
Confidence            46899999987 9999999888888999 99999999998876533     23322 222222221122    222222 


Q ss_pred             CCCccEEEEcccC
Q 018529          237 NGGVDRSVECTGN  249 (354)
Q Consensus       237 ~~~~dvv~d~~g~  249 (354)
                      .+..|+++++.|.
T Consensus        90 ~g~~~~li~nag~  102 (269)
T d1xu9a_          90 MGGLDMLILNHIT  102 (269)
T ss_dssp             HTSCSEEEECCCC
T ss_pred             hCCcccccccccc
Confidence            2368999887764

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=97.21  E-value=0.0026  Score=51.78  Aligned_cols=79  Identities=19%  Similarity=0.218  Sum_probs=53.0

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhh--HHHHHhcCCceE---EcCCCCChhHHHHHHHHcC--CCc
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR--FEEAKKFGVTDF---VNTSEHDRPIQEVIAEMTN--GGV  240 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~--~~~~~~lg~~~v---~~~~~~~~~~~~~i~~~~~--~~~  240 (354)
                      +|+++||+|+ +++|.+.++.+...|+ +|+.+++++++  .+.++++|....   .|..+. .++.+.+++...  |++
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~Ga-~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~~-~~v~~~~~~~~~~~G~i   81 (247)
T d2ew8a1           4 KDKLAVITGGANGIGRAIAERFAVEGA-DIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQP-GDVEAFGKQVISTFGRC   81 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCH-HHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCchHHHHHHHHHcCCcEEEEEeeCCCH-HHHHHHHHHHHHHcCCC
Confidence            4788999987 9999999999999999 88888886543  344566775432   233332 222222222221  479


Q ss_pred             cEEEEcccC
Q 018529          241 DRSVECTGN  249 (354)
Q Consensus       241 dvv~d~~g~  249 (354)
                      |++++++|.
T Consensus        82 DilVnnAG~   90 (247)
T d2ew8a1          82 DILVNNAGI   90 (247)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999885

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=97.20  E-value=0.00085  Score=49.09  Aligned_cols=75  Identities=13%  Similarity=0.258  Sum_probs=56.3

Q ss_pred             CeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcccCh
Q 018529          171 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI  250 (354)
Q Consensus       171 ~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~~  250 (354)
                      ++++|.|.|.+|...++.+...|. .|++++.++++.+.+++.|...++. +..+.+.   +.+..-..+|.++-+++..
T Consensus         1 k~~iIiG~G~~G~~la~~L~~~g~-~vvvid~d~~~~~~~~~~~~~~~~g-d~~~~~~---l~~a~i~~a~~vi~~~~~~   75 (134)
T d2hmva1           1 KQFAVIGLGRFGGSIVKELHRMGH-EVLAVDINEEKVNAYASYATHAVIA-NATEENE---LLSLGIRNFEYVIVAIGAN   75 (134)
T ss_dssp             CCEEEECCSHHHHHHHHHHHHTTC-CCEEEESCHHHHHHTTTTCSEEEEC-CTTCTTH---HHHHTGGGCSEEEECCCSC
T ss_pred             CEEEEECCCHHHHHHHHHHHHCCC-eEEEecCcHHHHHHHHHhCCcceee-ecccchh---hhccCCccccEEEEEcCch
Confidence            357888999999999999999999 9999999999999999888755443 3333233   3333212578898888764

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.19  E-value=0.00073  Score=55.11  Aligned_cols=80  Identities=14%  Similarity=0.156  Sum_probs=55.3

Q ss_pred             CCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-HhcCCceE---EcCCCCC--hhHHHHHHHHcCCCc
Q 018529          168 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTDF---VNTSEHD--RPIQEVIAEMTNGGV  240 (354)
Q Consensus       168 ~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~~lg~~~v---~~~~~~~--~~~~~~i~~~~~~~~  240 (354)
                      -+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+ ++++....   .|..+.+  +.+.+.+.+.. +++
T Consensus         4 L~gK~alITGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~i   81 (244)
T d1nffa_           4 LTGKVALVSGGARGMGASHVRAMVAEGA-KVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAF-GGL   81 (244)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHH-SCC
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhCcceEEEeecCCHHHHHHHHHHHHHHh-CCC
Confidence            36789999987 9999999999999999 899999999887755 44543222   2333321  12333333322 479


Q ss_pred             cEEEEcccC
Q 018529          241 DRSVECTGN  249 (354)
Q Consensus       241 dvv~d~~g~  249 (354)
                      |++++++|.
T Consensus        82 dilinnAG~   90 (244)
T d1nffa_          82 HVLVNNAGI   90 (244)
T ss_dssp             CEEEECCCC
T ss_pred             eEEEECCcc
Confidence            999999885

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=97.17  E-value=0.002  Score=49.83  Aligned_cols=43  Identities=23%  Similarity=0.407  Sum_probs=36.9

Q ss_pred             CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH
Q 018529          168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA  210 (354)
Q Consensus       168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~  210 (354)
                      -++.+|+|+|+|++|.+++..+...|.+.++.+.|+.++.+.+
T Consensus        16 l~~k~vlIlGaGGaarai~~al~~~g~~~i~i~nR~~~~~~~~   58 (182)
T d1vi2a1          16 IKGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKA   58 (182)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHH
T ss_pred             cCCCEEEEECCcHHHHHHHHHHhhcCCceEeeeccchHHHHHH
Confidence            3678999999999999999999999998999999987766543

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=97.14  E-value=0.0013  Score=49.95  Aligned_cols=75  Identities=23%  Similarity=0.331  Sum_probs=54.5

Q ss_pred             eEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCC-ceEEcCCCCChhHHHHHHHHcCCCccEEEEcccCh
Q 018529          172 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV-TDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI  250 (354)
Q Consensus       172 ~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~-~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~~  250 (354)
                      +|.|+|+|.+|...+..++..|. .|++.++++++.+.+++.|. +...+..+       .+     ...|+||-++.. 
T Consensus         2 kI~iIG~G~mG~~lA~~l~~~g~-~V~~~d~~~~~~~~a~~~~~~~~~~~~~~-------~~-----~~~DiIilavp~-   67 (165)
T d2f1ka2           2 KIGVVGLGLIGASLAGDLRRRGH-YLIGVSRQQSTCEKAVERQLVDEAGQDLS-------LL-----QTAKIIFLCTPI-   67 (165)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTSCSEEESCGG-------GG-----TTCSEEEECSCH-
T ss_pred             EEEEEeecHHHHHHHHHHHHCCC-EEEEEECCchHHHHHHHhhccceeeeecc-------cc-----cccccccccCcH-
Confidence            57899999999988888888898 99999999999999998885 33332211       11     258999998865 


Q ss_pred             HhHHHHHHHh
Q 018529          251 DNMISAFECV  260 (354)
Q Consensus       251 ~~~~~~~~~l  260 (354)
                      +..+..++.+
T Consensus        68 ~~~~~vl~~l   77 (165)
T d2f1ka2          68 QLILPTLEKL   77 (165)
T ss_dssp             HHHHHHHHHH
T ss_pred             hhhhhhhhhh
Confidence            3444444443

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.14  E-value=0.0033  Score=45.65  Aligned_cols=74  Identities=18%  Similarity=0.252  Sum_probs=56.2

Q ss_pred             eEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh-cCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcccCh
Q 018529          172 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI  250 (354)
Q Consensus       172 ~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~-lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~~  250 (354)
                      +|+|.|+|.+|...++.+...|. .|++++.++++.+.+++ ++.. ++..+..+.   +.+++..-..+|.++.+++..
T Consensus         2 ~IvI~G~G~~G~~la~~L~~~g~-~v~vid~d~~~~~~~~~~~~~~-vi~Gd~~~~---~~l~~~~i~~a~~vv~~t~~d   76 (132)
T d1lssa_           2 YIIIAGIGRVGYTLAKSLSEKGH-DIVLIDIDKDICKKASAEIDAL-VINGDCTKI---KTLEDAGIEDADMYIAVTGKE   76 (132)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCSSE-EEESCTTSH---HHHHHTTTTTCSEEEECCSCH
T ss_pred             EEEEECCCHHHHHHHHHHHHCCC-CcceecCChhhhhhhhhhhhhh-hccCcccch---hhhhhcChhhhhhhcccCCcH
Confidence            58899999999999999999998 99999999999988765 5654 443333332   345554334789999988874

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=97.14  E-value=0.00037  Score=57.17  Aligned_cols=80  Identities=18%  Similarity=0.235  Sum_probs=55.2

Q ss_pred             CCeEEEEcC-ChhHHHHHHHHHHcCCc-EEEEEcCChhhHHHHHhcCCce--EE--cCCCCC--hhHHHHHHHHcCC-Cc
Q 018529          170 GSSVAVFGL-GAVGLAAAEGARIAGAS-RIIGVDRSSKRFEEAKKFGVTD--FV--NTSEHD--RPIQEVIAEMTNG-GV  240 (354)
Q Consensus       170 ~~~vlI~G~-g~~G~~a~~~a~~~g~~-~vi~v~~~~~~~~~~~~lg~~~--v~--~~~~~~--~~~~~~i~~~~~~-~~  240 (354)
                      .++|||+|+ +++|.+.++.+...|+. .|+.+.+++++.+.+++.....  ++  |..+.+  +.+.+.+.+..+. +.
T Consensus         3 ~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~~i   82 (250)
T d1yo6a1           3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGL   82 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGCC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHHHHHhCCCCe
Confidence            478999987 99999988877777863 7888899999988877754322  22  333321  2344445444444 69


Q ss_pred             cEEEEcccC
Q 018529          241 DRSVECTGN  249 (354)
Q Consensus       241 dvv~d~~g~  249 (354)
                      |++++++|.
T Consensus        83 dilinnAG~   91 (250)
T d1yo6a1          83 SLLINNAGV   91 (250)
T ss_dssp             CEEEECCCC
T ss_pred             EEEEEcCcc
Confidence            999999884

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=97.14  E-value=0.00066  Score=55.84  Aligned_cols=79  Identities=23%  Similarity=0.329  Sum_probs=55.4

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHH-HHhcCCceE---EcCCCCChhHHHHHHHHcC--CCcc
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEE-AKKFGVTDF---VNTSEHDRPIQEVIAEMTN--GGVD  241 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~-~~~lg~~~v---~~~~~~~~~~~~~i~~~~~--~~~d  241 (354)
                      +|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+. .+++|....   .|..+.+ ++.+.+++...  +++|
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~~~-~v~~~~~~~~~~~g~iD   81 (256)
T d1k2wa_           4 DGKTALITGSARGIGRAFAEAYVREGA-RVAIADINLEAARATAAEIGPAACAIALDVTDQA-SIDRCVAELLDRWGSID   81 (256)
T ss_dssp             TTEEEEEETCSSHHHHHHHHHHHHTTE-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHH-HHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCceEEEEeeCCCHH-HHHHHHHHHHHHhCCcc
Confidence            5789999987 9999999999999999 89999999887765 456775432   2333322 22222222221  4799


Q ss_pred             EEEEcccC
Q 018529          242 RSVECTGN  249 (354)
Q Consensus       242 vv~d~~g~  249 (354)
                      ++++++|.
T Consensus        82 ilVnnAg~   89 (256)
T d1k2wa_          82 ILVNNAAL   89 (256)
T ss_dssp             EEEECCCC
T ss_pred             EEEeeccc
Confidence            99999885

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.14  E-value=0.0017  Score=52.50  Aligned_cols=72  Identities=22%  Similarity=0.271  Sum_probs=52.0

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEE-cCCCCChhHHHHHHHHcCCCccEEEEc
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFV-NTSEHDRPIQEVIAEMTNGGVDRSVEC  246 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~-~~~~~~~~~~~~i~~~~~~~~dvv~d~  246 (354)
                      +|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.   ++.+...+. |..+   ++...++++  +.+|+++++
T Consensus         3 kgK~~lVTGas~GIG~aia~~l~~~Ga-~V~~~~r~~~~l---~~~~~~~~~~Dv~~---~~~~~~~~~--g~iD~lVnn   73 (234)
T d1o5ia_           3 RDKGVLVLAASRGIGRAVADVLSQEGA-EVTICARNEELL---KRSGHRYVVCDLRK---DLDLLFEKV--KEVDILVLN   73 (234)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHH---HHTCSEEEECCTTT---CHHHHHHHS--CCCSEEEEC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHH---HhcCCcEEEcchHH---HHHHHHHHh--CCCcEEEec
Confidence            5789999987 9999999999999999 899999887654   455554332 3222   243334333  479999999


Q ss_pred             ccC
Q 018529          247 TGN  249 (354)
Q Consensus       247 ~g~  249 (354)
                      +|.
T Consensus        74 AG~   76 (234)
T d1o5ia_          74 AGG   76 (234)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            875

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.13  E-value=0.0019  Score=53.43  Aligned_cols=103  Identities=21%  Similarity=0.228  Sum_probs=66.0

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCC-hhhHHH----HHhcCCceEEc-CCCCC-hhHHHHHHHHcC--C
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRS-SKRFEE----AKKFGVTDFVN-TSEHD-RPIQEVIAEMTN--G  238 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~-~~~~~~----~~~lg~~~v~~-~~~~~-~~~~~~i~~~~~--~  238 (354)
                      +|+++||+|+ +++|.+.++.+...|+ +|+.++++ ++..+.    +++.|.+.... .+-.+ +++.+.+.+...  +
T Consensus        17 ~gK~~lITGas~GIG~aia~~la~~Ga-~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g   95 (272)
T d1g0oa_          17 EGKVALVTGAGRGIGREMAMELGRRGC-KVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFG   95 (272)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHhC
Confidence            4789999987 9999999999999999 78877665 444332    34556544322 22222 223333333222  4


Q ss_pred             CccEEEEcccCh-------------------------HhHHHHHHHhhCCCceEEEEcCC
Q 018529          239 GVDRSVECTGNI-------------------------DNMISAFECVHDGWGVAVLVGVP  273 (354)
Q Consensus       239 ~~dvv~d~~g~~-------------------------~~~~~~~~~l~~~~g~~v~~g~~  273 (354)
                      +.|+++++.|..                         ...+.+...|... |+++.++..
T Consensus        96 ~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~-g~~i~i~s~  154 (272)
T d1g0oa_          96 KLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIG-GRLILMGSI  154 (272)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTT-CEEEEECCG
T ss_pred             CCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccc-ccccccccc
Confidence            789999988752                         2344566667776 888877653

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=97.13  E-value=0.0014  Score=50.59  Aligned_cols=85  Identities=20%  Similarity=0.185  Sum_probs=58.0

Q ss_pred             CCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcC--------CCCChhHHHHHHHHcCCCcc
Q 018529          170 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT--------SEHDRPIQEVIAEMTNGGVD  241 (354)
Q Consensus       170 ~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~--------~~~~~~~~~~i~~~~~~~~d  241 (354)
                      .+++.|+|+|.+|.+.+..+...|. .|.+.++++++.+.+++.+.......        .....+..+.+     ..+|
T Consensus         1 sk~iaIiGaG~~G~~~A~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-----~~aD   74 (184)
T d1bg6a2           1 SKTYAVLGLGNGGHAFAAYLALKGQ-SVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAV-----KDAD   74 (184)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHH-----TTCS
T ss_pred             CCEEEEECccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhHh-----cCCC
Confidence            3689999999999999999999998 99999999999998887654222110        00001133333     2489


Q ss_pred             EEEEcccChHhHHHHHHHhh
Q 018529          242 RSVECTGNIDNMISAFECVH  261 (354)
Q Consensus       242 vv~d~~g~~~~~~~~~~~l~  261 (354)
                      ++|-++... ..+..++.++
T Consensus        75 ~iii~v~~~-~~~~~~~~i~   93 (184)
T d1bg6a2          75 VILIVVPAI-HHASIAANIA   93 (184)
T ss_dssp             EEEECSCGG-GHHHHHHHHG
T ss_pred             EEEEEEchh-HHHHHHHHhh
Confidence            999999774 3444444333

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.10  E-value=0.0005  Score=54.45  Aligned_cols=97  Identities=18%  Similarity=0.176  Sum_probs=63.0

Q ss_pred             CCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEccc
Q 018529          170 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  248 (354)
Q Consensus       170 ~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g  248 (354)
                      .++|+|+|+ |.+|...+..+...|. .|+++.|+.++.......++..+. .+-.+  . +.+.+.. .+.|+||.++|
T Consensus         3 ~kkIlV~GatG~iG~~v~~~Ll~~g~-~V~~~~R~~~~~~~~~~~~~~~~~-gD~~d--~-~~l~~al-~~~d~vi~~~g   76 (205)
T d1hdoa_           3 VKKIAIFGATGQTGLTTLAQAVQAGY-EVTVLVRDSSRLPSEGPRPAHVVV-GDVLQ--A-ADVDKTV-AGQDAVIVLLG   76 (205)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCGGGSCSSSCCCSEEEE-SCTTS--H-HHHHHHH-TTCSEEEECCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCcC-EEEEEEcChhhccccccccccccc-ccccc--h-hhHHHHh-cCCCEEEEEec
Confidence            478999997 9999999998888998 899999998886554445554332 22222  2 2233322 25899999987


Q ss_pred             Ch----------HhHHHHHHHhhCC-CceEEEEcC
Q 018529          249 NI----------DNMISAFECVHDG-WGVAVLVGV  272 (354)
Q Consensus       249 ~~----------~~~~~~~~~l~~~-~g~~v~~g~  272 (354)
                      ..          .....+++.++.. ..+++.++.
T Consensus        77 ~~~~~~~~~~~~~~~~~l~~aa~~~~v~r~i~~ss  111 (205)
T d1hdoa_          77 TRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTS  111 (205)
T ss_dssp             CTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred             cCCchhhhhhhHHHHHHHHHHHHhcCCCeEEEEee
Confidence            53          1223344444443 147787764

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=97.10  E-value=9e-05  Score=60.43  Aligned_cols=96  Identities=23%  Similarity=0.274  Sum_probs=60.6

Q ss_pred             CCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCC-----hhHHHHHHHHc-CCCccE
Q 018529          170 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHD-----RPIQEVIAEMT-NGGVDR  242 (354)
Q Consensus       170 ~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~-----~~~~~~i~~~~-~~~~dv  242 (354)
                      +.+|||+|+ +++|.+.++.+...|+ +|+.++++++...      ........+.+     ....+.+.... .++.|+
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~-~V~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD~   74 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGY-TVLNIDLSANDQA------DSNILVDGNKNWTEQEQSILEQTASSLQGSQVDG   74 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCCTTS------SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCchhcc------cccceeccccCchhHHHHHHHHHHHHhcCCCeeE
Confidence            457899987 9999999999999999 8999988775421      11121111111     11122233332 347999


Q ss_pred             EEEcccCh--------------------------HhHHHHHHHhhCCCceEEEEcCC
Q 018529          243 SVECTGNI--------------------------DNMISAFECVHDGWGVAVLVGVP  273 (354)
Q Consensus       243 v~d~~g~~--------------------------~~~~~~~~~l~~~~g~~v~~g~~  273 (354)
                      +++++|..                          ......+..|+++ |++++++..
T Consensus        75 linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~-g~Iv~isS~  130 (235)
T d1ooea_          75 VFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPG-GLLQLTGAA  130 (235)
T ss_dssp             EEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEECCG
T ss_pred             EEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccc-eEEEEeccH
Confidence            99998741                          1223345556776 999998864

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.09  E-value=0.0041  Score=52.17  Aligned_cols=103  Identities=18%  Similarity=0.265  Sum_probs=65.0

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCCh---------hhHHH----HHhcCCceEEcCCCCC--hhHHHHH
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS---------KRFEE----AKKFGVTDFVNTSEHD--RPIQEVI  232 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~---------~~~~~----~~~lg~~~v~~~~~~~--~~~~~~i  232 (354)
                      +|+++||+|+ +++|.+.++.+...|+ +|+..+++.         +..+.    +...+.....+..+.+  +.+.+.+
T Consensus         6 ~gKvalITGas~GIG~aiA~~la~~Ga-~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~   84 (302)
T d1gz6a_           6 DGRVVLVTGAGGGLGRAYALAFAERGA-LVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTA   84 (302)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHHHHH
Confidence            4788999987 9999999999999999 888876543         22222    2234555555555433  1233333


Q ss_pred             HHHcCCCccEEEEcccCh-------------------------HhHHHHHHHhhC-CCceEEEEcCC
Q 018529          233 AEMTNGGVDRSVECTGNI-------------------------DNMISAFECVHD-GWGVAVLVGVP  273 (354)
Q Consensus       233 ~~~~~~~~dvv~d~~g~~-------------------------~~~~~~~~~l~~-~~g~~v~~g~~  273 (354)
                      .+. .|++|++++++|..                         ...+.++..|.. ++|++|.++..
T Consensus        85 ~~~-~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~  150 (302)
T d1gz6a_          85 LDT-FGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASA  150 (302)
T ss_dssp             HHH-TSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCH
T ss_pred             HHH-cCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCCh
Confidence            222 24799999998852                         133445555532 23899999864

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=97.07  E-value=0.0015  Score=53.94  Aligned_cols=79  Identities=16%  Similarity=0.269  Sum_probs=53.6

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH-hcCC---ceEE--cCCCCChhHHHHHHHHcC--CC
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGV---TDFV--NTSEHDRPIQEVIAEMTN--GG  239 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~-~lg~---~~v~--~~~~~~~~~~~~i~~~~~--~~  239 (354)
                      +|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+. +++.   ...+  |..+. +++.+.+.+...  +.
T Consensus         5 ~gKvalITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~~~g~   82 (268)
T d2bgka1           5 QDKVAIITGGAGGIGETTAKLFVRYGA-KVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKD-EDVRNLVDTTIAKHGK   82 (268)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCH-HHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCH-HHHHHHHHHHHHHcCC
Confidence            6889999987 9999999999889999 8999999998877553 3432   2222  33322 223222322211  47


Q ss_pred             ccEEEEcccC
Q 018529          240 VDRSVECTGN  249 (354)
Q Consensus       240 ~dvv~d~~g~  249 (354)
                      +|++++++|.
T Consensus        83 iD~lVnnAG~   92 (268)
T d2bgka1          83 LDIMFGNVGV   92 (268)
T ss_dssp             CCEEEECCCC
T ss_pred             cceecccccc
Confidence            9999998874

>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein YcgJ
species: Bacillus subtilis [TaxId: 1423]

Probab=97.07  E-value=0.00055  Score=55.43  Aligned_cols=102  Identities=19%  Similarity=0.169  Sum_probs=68.7

Q ss_pred             hhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCceEEcCCCCChhHHHHHHHHc
Q 018529          161 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMT  236 (354)
Q Consensus       161 l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~~~  236 (354)
                      +.+.+.++||++||=+|||. |..+..+++. +. +|+++|.+++..+.+++    .+.+.+.....+-.++     .+.
T Consensus         8 l~~~~~~~~~~rILDiGcGt-G~~~~~la~~-~~-~v~gvD~S~~~l~~A~~~~~~~~~~~~~~~~~d~~~~-----~~~   79 (234)
T d1xxla_           8 MIKTAECRAEHRVLDIGAGA-GHTALAFSPY-VQ-ECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESL-----PFP   79 (234)
T ss_dssp             HHHHHTCCTTCEEEEESCTT-SHHHHHHGGG-SS-EEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBC-----CSC
T ss_pred             HHHHhCCCCCCEEEEeCCcC-cHHHHHHHHh-CC-eEEEEeCChhhhhhhhhhhcccccccccccccccccc-----ccc
Confidence            56789999999999999975 7777788775 55 89999999987766643    3443221111100000     022


Q ss_pred             CCCccEEEEcccC------hHhHHHHHHHhhCCCceEEEEc
Q 018529          237 NGGVDRSVECTGN------IDNMISAFECVHDGWGVAVLVG  271 (354)
Q Consensus       237 ~~~~dvv~d~~g~------~~~~~~~~~~l~~~~g~~v~~g  271 (354)
                      ++.||+|+..-.-      ...+..+.+.|+++ |++++..
T Consensus        80 ~~~fD~v~~~~~l~~~~d~~~~l~~~~r~Lkpg-G~~~~~~  119 (234)
T d1xxla_          80 DDSFDIITCRYAAHHFSDVRKAVREVARVLKQD-GRFLLVD  119 (234)
T ss_dssp             TTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             ccccceeeeeceeecccCHHHHHHHHHHeeCCC-cEEEEEE
Confidence            3479999874321      24688899999997 9988764

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=97.07  E-value=0.00078  Score=56.06  Aligned_cols=78  Identities=19%  Similarity=0.321  Sum_probs=53.9

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-HhcCCceE---EcCCCCChhHHHHHHHHcC--CCcc
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTDF---VNTSEHDRPIQEVIAEMTN--GGVD  241 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~~lg~~~v---~~~~~~~~~~~~~i~~~~~--~~~d  241 (354)
                      +|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+ +++|....   .|..+. .+..+.+.+...  +++|
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~-~~~~~~~~~~~~~~g~id   81 (276)
T d1bdba_           4 KGEAVLITGGASGLGRALVDRFVAEGA-KVAVLDKSAERLAELETDHGDNVLGIVGDVRSL-EDQKQAASRCVARFGKID   81 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGEEEEECCTTCH-HHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCCCeeEEecccccH-HHHHHHHHHHHHHhCCcc
Confidence            5899999987 9999999999999999 999999999887654 44654322   233222 122222222221  4799


Q ss_pred             EEEEccc
Q 018529          242 RSVECTG  248 (354)
Q Consensus       242 vv~d~~g  248 (354)
                      ++++++|
T Consensus        82 ilvnnAG   88 (276)
T d1bdba_          82 TLIPNAG   88 (276)
T ss_dssp             EEECCCC
T ss_pred             ccccccc
Confidence            9999887

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=97.05  E-value=0.00075  Score=52.57  Aligned_cols=101  Identities=17%  Similarity=0.246  Sum_probs=67.3

Q ss_pred             hhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCC-ceEEcCCCCChhHHHHHHHHc
Q 018529          162 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGV-TDFVNTSEHDRPIQEVIAEMT  236 (354)
Q Consensus       162 ~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~-~~v~~~~~~~~~~~~~i~~~~  236 (354)
                      ....++++|++||=+|+|. |..++.+|+. +. +|++++.+++..+.+++    +|. +.+-... .+  ..+....  
T Consensus        26 l~~l~~~~g~~VLDiGcGs-G~~s~~lA~~-~~-~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~-gd--a~~~~~~--   97 (186)
T d1l3ia_          26 MCLAEPGKNDVAVDVGCGT-GGVTLELAGR-VR-RVYAIDRNPEAISTTEMNLQRHGLGDNVTLME-GD--APEALCK--   97 (186)
T ss_dssp             HHHHCCCTTCEEEEESCTT-SHHHHHHHTT-SS-EEEEEESCHHHHHHHHHHHHHTTCCTTEEEEE-SC--HHHHHTT--
T ss_pred             HHhcCCCCCCEEEEEECCe-Eccccccccc-ce-EEEEecCCHHHHHHHHHHHHHcCCCcceEEEE-Cc--hhhcccc--
Confidence            4567899999999998853 5556667764 44 89999999988887754    565 2332111 22  3332211  


Q ss_pred             CCCccEEEEcccC---hHhHHHHHHHhhCCCceEEEEc
Q 018529          237 NGGVDRSVECTGN---IDNMISAFECVHDGWGVAVLVG  271 (354)
Q Consensus       237 ~~~~dvv~d~~g~---~~~~~~~~~~l~~~~g~~v~~g  271 (354)
                      ...+|.|+...+.   .+.++.+.+.|+++ |+++...
T Consensus        98 ~~~~D~v~~~~~~~~~~~~~~~~~~~Lkpg-G~lvi~~  134 (186)
T d1l3ia_          98 IPDIDIAVVGGSGGELQEILRIIKDKLKPG-GRIIVTA  134 (186)
T ss_dssp             SCCEEEEEESCCTTCHHHHHHHHHHTEEEE-EEEEEEE
T ss_pred             cCCcCEEEEeCccccchHHHHHHHHHhCcC-CEEEEEe
Confidence            2379999876433   35677888899997 9987653

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=97.04  E-value=0.0011  Score=51.71  Aligned_cols=102  Identities=11%  Similarity=-0.027  Sum_probs=65.9

Q ss_pred             hhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCC-ce---------EEcCCC-----CC-
Q 018529          162 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV-TD---------FVNTSE-----HD-  225 (354)
Q Consensus       162 ~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~-~~---------v~~~~~-----~~-  225 (354)
                      +....+.||.+||.+|||. |..+..+|+. |. .|+++|.+++..+.+++... ..         ......     .+ 
T Consensus        13 ~~~l~~~~~~rvLd~GCG~-G~~a~~la~~-G~-~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~   89 (201)
T d1pjza_          13 WSSLNVVPGARVLVPLCGK-SQDMSWLSGQ-GY-HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDF   89 (201)
T ss_dssp             HHHHCCCTTCEEEETTTCC-SHHHHHHHHH-CC-EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECC
T ss_pred             HHHcCCCCCCEEEEecCcC-CHHHHHHHHc-CC-ceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceecccc
Confidence            3445789999999999975 7888888874 88 99999999999998876311 00         000000     00 


Q ss_pred             hhHHHHHHHHcCCCccEEEEcccC--------hHhHHHHHHHhhCCCceEEEEc
Q 018529          226 RPIQEVIAEMTNGGVDRSVECTGN--------IDNMISAFECVHDGWGVAVLVG  271 (354)
Q Consensus       226 ~~~~~~i~~~~~~~~dvv~d~~g~--------~~~~~~~~~~l~~~~g~~v~~g  271 (354)
                      .++....    ...+|+|++...-        ...+..+.+.|+++ |++++..
T Consensus        90 ~~l~~~~----~~~~D~i~~~~~l~~l~~~~~~~~~~~i~~~Lkpg-G~l~l~~  138 (201)
T d1pjza_          90 FALTARD----IGHCAAFYDRAAMIALPADMRERYVQHLEALMPQA-CSGLLIT  138 (201)
T ss_dssp             SSSTHHH----HHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSE-EEEEEEE
T ss_pred             ccccccc----ccceeEEEEEeeeEecchhhhHHHHHHHHHhcCCC-cEEEEEE
Confidence            0010000    1258999885431        24567788899997 9876543

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=97.01  E-value=0.002  Score=52.61  Aligned_cols=96  Identities=23%  Similarity=0.280  Sum_probs=64.8

Q ss_pred             CCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCceEEcCCCCChhHHHHHHHHcCCCcc
Q 018529          166 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTNGGVD  241 (354)
Q Consensus       166 ~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~~~~~~~d  241 (354)
                      ..++|++||=+|+|. |.+++.+++ .|. +|++++.+++..+.+++    .|....+..  .+  +.+   ....+.||
T Consensus       117 ~~~~g~~VLDiGcGs-G~l~i~aa~-~g~-~V~gvDis~~av~~A~~na~~n~~~~~~~~--~d--~~~---~~~~~~fD  186 (254)
T d2nxca1         117 HLRPGDKVLDLGTGS-GVLAIAAEK-LGG-KALGVDIDPMVLPQAEANAKRNGVRPRFLE--GS--LEA---ALPFGPFD  186 (254)
T ss_dssp             HCCTTCEEEEETCTT-SHHHHHHHH-TTC-EEEEEESCGGGHHHHHHHHHHTTCCCEEEE--SC--HHH---HGGGCCEE
T ss_pred             hcCccCEEEEcccch-hHHHHHHHh-cCC-EEEEEECChHHHHHHHHHHHHcCCceeEEe--cc--ccc---cccccccc
Confidence            368999999999874 777776655 687 89999999998888764    354322211  11  222   12234899


Q ss_pred             EEEEcccCh---HhHHHHHHHhhCCCceEEEEcC
Q 018529          242 RSVECTGNI---DNMISAFECVHDGWGVAVLVGV  272 (354)
Q Consensus       242 vv~d~~g~~---~~~~~~~~~l~~~~g~~v~~g~  272 (354)
                      +|+......   +.+..+.+.|+++ |++++.|.
T Consensus       187 ~V~ani~~~~l~~l~~~~~~~LkpG-G~lilSgi  219 (254)
T d2nxca1         187 LLVANLYAELHAALAPRYREALVPG-GRALLTGI  219 (254)
T ss_dssp             EEEEECCHHHHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             hhhhccccccHHHHHHHHHHhcCCC-cEEEEEec
Confidence            998654322   3456777889997 99987653

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.00  E-value=0.0016  Score=48.88  Aligned_cols=102  Identities=24%  Similarity=0.225  Sum_probs=72.2

Q ss_pred             hhhhhhhhcC-CCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHH
Q 018529          157 GLGATLNVAK-PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEM  235 (354)
Q Consensus       157 a~~~l~~~~~-~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~  235 (354)
                      .+.++.+..+ .-.|++++|.|-|-+|...++.++.+|+ +|++++.++-+.-.+.--|.. +..       +.+.+   
T Consensus        10 ~~~~~~r~t~~~l~Gk~v~V~GyG~iG~g~A~~~rg~G~-~V~v~e~dp~~al~A~~dG~~-v~~-------~~~a~---   77 (163)
T d1li4a1          10 LIDGIKRATDVMIAGKVAVVAGYGDVGKGCAQALRGFGA-RVIITEIDPINALQAAMEGYE-VTT-------MDEAC---   77 (163)
T ss_dssp             HHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCE-ECC-------HHHHT---
T ss_pred             HHHHHHHHhCceecCCEEEEeccccccHHHHHHHHhCCC-eeEeeecccchhHHhhcCceE-eee-------hhhhh---
Confidence            3444445444 5689999999999999999999999999 999999988665555444543 221       22222   


Q ss_pred             cCCCccEEEEcccChH-hHHHHHHHhhCCCceEEEEcCC
Q 018529          236 TNGGVDRSVECTGNID-NMISAFECVHDGWGVAVLVGVP  273 (354)
Q Consensus       236 ~~~~~dvv~d~~g~~~-~~~~~~~~l~~~~g~~v~~g~~  273 (354)
                        ...|+++-++|... .-..-++.|+++ ..++.+|..
T Consensus        78 --~~adivvtaTGn~~vI~~eh~~~MKdg-aIL~N~Ghf  113 (163)
T d1li4a1          78 --QEGNIFVTTTGCIDIILGRHFEQMKDD-AIVCNIGHF  113 (163)
T ss_dssp             --TTCSEEEECSSCSCSBCHHHHTTCCTT-EEEEECSSS
T ss_pred             --hhccEEEecCCCccchhHHHHHhccCC-eEEEEeccc
Confidence              24799999999854 345777888886 666555543

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=96.99  E-value=0.0011  Score=54.39  Aligned_cols=79  Identities=19%  Similarity=0.304  Sum_probs=53.8

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH----HhcCCceE-E--cCCCCC--hhHHHHHHHHcCC
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTDF-V--NTSEHD--RPIQEVIAEMTNG  238 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~----~~lg~~~v-~--~~~~~~--~~~~~~i~~~~~~  238 (354)
                      +|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+    ++.|.... +  |..+.+  +.+.+.+.+.. +
T Consensus        10 ~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~-g   87 (255)
T d1fmca_          10 DGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKL-G   87 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHc-C
Confidence            6889999987 9999999999989999 899999998876654    34554332 2  222211  11222222222 4


Q ss_pred             CccEEEEcccC
Q 018529          239 GVDRSVECTGN  249 (354)
Q Consensus       239 ~~dvv~d~~g~  249 (354)
                      ++|++++++|.
T Consensus        88 ~iDilvnnAG~   98 (255)
T d1fmca_          88 KVDILVNNAGG   98 (255)
T ss_dssp             SCCEEEECCCC
T ss_pred             CCCEeeeCCcC
Confidence            79999999875

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=96.96  E-value=0.002  Score=52.90  Aligned_cols=102  Identities=21%  Similarity=0.228  Sum_probs=65.0

Q ss_pred             CCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEE-cCChhhHHH----HHhcCCceE-EcCCCCC-h---hHHHHHHHHc
Q 018529          168 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGV-DRSSKRFEE----AKKFGVTDF-VNTSEHD-R---PIQEVIAEMT  236 (354)
Q Consensus       168 ~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v-~~~~~~~~~----~~~lg~~~v-~~~~~~~-~---~~~~~i~~~~  236 (354)
                      -.|+++||+|+ +++|.+.++.+...|+ +|+.+ .++++..+.    +++.|.... +..+-.+ +   ++.+.+.+..
T Consensus         4 L~GK~alITGas~GIG~aia~~la~~G~-~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~   82 (259)
T d1ja9a_           4 LAGKVALTTGAGRGIGRGIAIELGRRGA-SVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHF   82 (259)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHc
Confidence            46899999987 9999999999999999 66654 556555443    345676433 2222222 1   2223333322


Q ss_pred             CCCccEEEEcccCh-------------------------HhHHHHHHHhhCCCceEEEEcC
Q 018529          237 NGGVDRSVECTGNI-------------------------DNMISAFECVHDGWGVAVLVGV  272 (354)
Q Consensus       237 ~~~~dvv~d~~g~~-------------------------~~~~~~~~~l~~~~g~~v~~g~  272 (354)
                       ++.|++++++|..                         ...+.++..++.+ |.++.+..
T Consensus        83 -g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~-g~~iii~s  141 (259)
T d1ja9a_          83 -GGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG-GRIILTSS  141 (259)
T ss_dssp             -SCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE-EEEEEECC
T ss_pred             -CCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcC-Cccccccc
Confidence             3799999988852                         2344566667776 77777654

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=96.95  E-value=0.00085  Score=54.00  Aligned_cols=100  Identities=17%  Similarity=0.211  Sum_probs=69.0

Q ss_pred             hhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCceE--EcCCCCChhHHHHHHH
Q 018529          161 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDF--VNTSEHDRPIQEVIAE  234 (354)
Q Consensus       161 l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~~v--~~~~~~~~~~~~~i~~  234 (354)
                      +.+.++++++++||=+||| .|..+..+++. |. +|++++.+++..+.+++    .+.+.+  +..+..+  +     .
T Consensus         7 ll~~~~l~~~~rVLDiGcG-~G~~~~~l~~~-~~-~v~gvD~s~~~i~~A~~~~~~~~~~~i~~~~~d~~~--l-----~   76 (231)
T d1vl5a_           7 LMQIAALKGNEEVLDVATG-GGHVANAFAPF-VK-KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQ--M-----P   76 (231)
T ss_dssp             HHHHHTCCSCCEEEEETCT-TCHHHHHHGGG-SS-EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-C--C-----C
T ss_pred             HHHhcCCCCcCEEEEeccc-CcHHHHHHHHh-CC-EEEEEECCHHHHhhhhhccccccccccccccccccc--c-----c
Confidence            5678899999999999997 57777777754 66 89999999987776643    454332  2221111  1     0


Q ss_pred             HcCCCccEEEEccc-----C-hHhHHHHHHHhhCCCceEEEEc
Q 018529          235 MTNGGVDRSVECTG-----N-IDNMISAFECVHDGWGVAVLVG  271 (354)
Q Consensus       235 ~~~~~~dvv~d~~g-----~-~~~~~~~~~~l~~~~g~~v~~g  271 (354)
                      +..+.||+|+..-.     . ...+..+.+.|+|+ |++++..
T Consensus        77 ~~~~~fD~v~~~~~l~~~~d~~~~l~~~~r~Lkpg-G~l~i~~  118 (231)
T d1vl5a_          77 FTDERFHIVTCRIAAHHFPNPASFVSEAYRVLKKG-GQLLLVD  118 (231)
T ss_dssp             SCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             ccccccccccccccccccCCHHHHHHHHHHhcCCC-cEEEEEe
Confidence            12347999986532     2 24688899999997 9988764

>d2b25a1 c.66.1.13 (A:6-329) Hypothetical protein FLJ20628 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein FLJ20628
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.94  E-value=0.00032  Score=59.64  Aligned_cols=105  Identities=17%  Similarity=0.204  Sum_probs=69.2

Q ss_pred             hhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCc-EEEEEcCChhhHHHHHh----cC-----------CceE-EcCCC
Q 018529          161 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGAS-RIIGVDRSSKRFEEAKK----FG-----------VTDF-VNTSE  223 (354)
Q Consensus       161 l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~-~vi~v~~~~~~~~~~~~----lg-----------~~~v-~~~~~  223 (354)
                      +....+++||++||=.|+|. |.+++.+|+..|.+ +|++++.+++..+.+++    ++           .+.+ +...+
T Consensus        90 Il~~l~i~pG~rVLE~GtGs-G~lt~~LAr~vg~~G~V~t~E~~~~~~~~A~~n~~~~~~~~~~~~~~~~~~nv~~~~~d  168 (324)
T d2b25a1          90 ILSMMDINPGDTVLEAGSGS-GGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKD  168 (324)
T ss_dssp             HHHHHTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESC
T ss_pred             HHHHhCCCCCCEEEEecccc-cHHHHHHHHHhCCCcEEEEecCCHHHHHHHHHHHHHhhhhhhhhhhhccccceeEEecc
Confidence            45678999999999999875 88999999988743 89999999998888754    11           1112 11111


Q ss_pred             CChhHHHHHHHHcCCCccEEEEcccCh-HhHHHHHHHhhCCCceEEEEc
Q 018529          224 HDRPIQEVIAEMTNGGVDRSVECTGNI-DNMISAFECVHDGWGVAVLVG  271 (354)
Q Consensus       224 ~~~~~~~~i~~~~~~~~dvv~d~~g~~-~~~~~~~~~l~~~~g~~v~~g  271 (354)
                          +.+....+..+.+|.||--.+.+ ..+..+.+.|+++ |+++.+-
T Consensus       169 ----i~~~~~~~~~~~fD~V~LD~p~P~~~l~~~~~~LKpG-G~lv~~~  212 (324)
T d2b25a1         169 ----ISGATEDIKSLTFDAVALDMLNPHVTLPVFYPHLKHG-GVCAVYV  212 (324)
T ss_dssp             ----TTCCC-------EEEEEECSSSTTTTHHHHGGGEEEE-EEEEEEE
T ss_pred             ----hhhcccccCCCCcceEeecCcCHHHHHHHHHHhccCC-CEEEEEe
Confidence                10001111223689887544443 5788999999997 9988764

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=96.94  E-value=0.0043  Score=50.83  Aligned_cols=79  Identities=23%  Similarity=0.318  Sum_probs=51.2

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCCh-hhHHHH-----HhcCCceEE---cCCCCC--hhHHHHHHHHc
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS-KRFEEA-----KKFGVTDFV---NTSEHD--RPIQEVIAEMT  236 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~-~~~~~~-----~~lg~~~v~---~~~~~~--~~~~~~i~~~~  236 (354)
                      +|+++||+|+ +++|.+.++.+...|+ +|+.+++++ ++.+.+     .+.|.....   |..+.+  +++.+.+.+..
T Consensus         3 ~gK~alITGas~GIG~aiA~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (260)
T d1x1ta1           3 KGKVAVVTGSTSGIGLGIATALAAQGA-DIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CcCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            6889999987 9999999988889999 899998864 444332     234544332   222221  12333333322


Q ss_pred             CCCccEEEEcccC
Q 018529          237 NGGVDRSVECTGN  249 (354)
Q Consensus       237 ~~~~dvv~d~~g~  249 (354)
                       |+.|++++++|.
T Consensus        82 -G~iDiLVnnAG~   93 (260)
T d1x1ta1          82 -GRIDILVNNAGI   93 (260)
T ss_dssp             -SCCSEEEECCCC
T ss_pred             -CCCcEEEeeccc
Confidence             479999999885

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.91  E-value=0.0014  Score=54.45  Aligned_cols=101  Identities=23%  Similarity=0.329  Sum_probs=63.3

Q ss_pred             CCCeE-EEEcC-ChhHHHHHH-HHHHcCCcEEEEEcCChhhHHHH----HhcCCc-eE--EcCCCCC--hhHHHHHHHHc
Q 018529          169 RGSSV-AVFGL-GAVGLAAAE-GARIAGASRIIGVDRSSKRFEEA----KKFGVT-DF--VNTSEHD--RPIQEVIAEMT  236 (354)
Q Consensus       169 ~~~~v-lI~G~-g~~G~~a~~-~a~~~g~~~vi~v~~~~~~~~~~----~~lg~~-~v--~~~~~~~--~~~~~~i~~~~  236 (354)
                      .|.+| ||+|+ +++|++.++ +++..|+ +|+.+++++++.+.+    ++.|.. ..  .|..+.+  +.+.+.+.+..
T Consensus         1 ~g~rVAlVTGas~GIG~a~A~~la~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~   79 (275)
T d1wmaa1           1 SGIHVALVTGGNKGIGLAIVRDLCRLFSG-DVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEY   79 (275)
T ss_dssp             CCCCEEEESSCSSHHHHHHHHHHHHHSSS-EEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCeEEEECCCCCHHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhc
Confidence            36778 66787 999998665 5666688 899999999887654    333432 22  2333322  22334444432


Q ss_pred             CCCccEEEEcccCh-------------------------HhHHHHHHHhhCCCceEEEEcC
Q 018529          237 NGGVDRSVECTGNI-------------------------DNMISAFECVHDGWGVAVLVGV  272 (354)
Q Consensus       237 ~~~~dvv~d~~g~~-------------------------~~~~~~~~~l~~~~g~~v~~g~  272 (354)
                       +++|++++.+|..                         ...+.++..|++. |+++.++.
T Consensus        80 -g~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-g~ivnisS  138 (275)
T d1wmaa1          80 -GGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQ-GRVVNVSS  138 (275)
T ss_dssp             -SSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEE-EEEEEECC
T ss_pred             -CCcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcccccc
Confidence             4799999998852                         1233344556776 99988875

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=96.88  E-value=0.00067  Score=55.70  Aligned_cols=80  Identities=9%  Similarity=0.085  Sum_probs=49.2

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCceE----EcCCCCChhHHHHHHHHcC--
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDF----VNTSEHDRPIQEVIAEMTN--  237 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~~v----~~~~~~~~~~~~~i~~~~~--  237 (354)
                      +|++|||+|+ +++|.+.+......|+ +|+.+.++.++.+.+.+    .+-..+    .+.....+++.+.+.+...  
T Consensus         4 ~gK~vlITGgs~GIG~~~A~~la~~G~-~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~   82 (254)
T d1sbya1           4 TNKNVIFVAALGGIGLDTSRELVKRNL-KNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQL   82 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTCC-SEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHHc
Confidence            5899999987 8999998888888899 66666565555444332    222222    2222111223333333222  


Q ss_pred             CCccEEEEcccC
Q 018529          238 GGVDRSVECTGN  249 (354)
Q Consensus       238 ~~~dvv~d~~g~  249 (354)
                      +++|++++++|.
T Consensus        83 g~iDilvnnAG~   94 (254)
T d1sbya1          83 KTVDILINGAGI   94 (254)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEeCCCC
Confidence            479999999986

>d2avna1 c.66.1.41 (A:1-246) Hypothetical methyltransferase TM1389 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical methyltransferase TM1389
species: Thermotoga maritima [TaxId: 2336]

Probab=96.86  E-value=0.0013  Score=53.26  Aligned_cols=94  Identities=17%  Similarity=0.192  Sum_probs=68.5

Q ss_pred             CCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEE
Q 018529          166 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVE  245 (354)
Q Consensus       166 ~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d  245 (354)
                      .++++.+||=+||| .|..+..+++ .|+ +|++++.+++..+.+++-+....+.....+  +     .+..+.+|+|+.
T Consensus        39 ~~~~~~~vLDiGcG-~G~~~~~l~~-~~~-~v~giD~s~~~l~~a~~~~~~~~~~~~~~~--l-----~~~~~~fD~ii~  108 (246)
T d2avna1          39 YLKNPCRVLDLGGG-TGKWSLFLQE-RGF-EVVLVDPSKEMLEVAREKGVKNVVEAKAED--L-----PFPSGAFEAVLA  108 (246)
T ss_dssp             HCCSCCEEEEETCT-TCHHHHHHHT-TTC-EEEEEESCHHHHHHHHHHTCSCEEECCTTS--C-----CSCTTCEEEEEE
T ss_pred             hcCCCCEEEEECCC-Cchhcccccc-cce-EEEEeecccccccccccccccccccccccc--c-----ccccccccceee
Confidence            35678899989998 5888888886 488 899999999999999987766555433322  1     122347999986


Q ss_pred             cccC-------hHhHHHHHHHhhCCCceEEEE
Q 018529          246 CTGN-------IDNMISAFECVHDGWGVAVLV  270 (354)
Q Consensus       246 ~~g~-------~~~~~~~~~~l~~~~g~~v~~  270 (354)
                      ....       ...+..+.+.|+++ |.+++.
T Consensus       109 ~~~~~~~~~d~~~~l~~i~r~Lk~g-G~~ii~  139 (246)
T d2avna1         109 LGDVLSYVENKDKAFSEIRRVLVPD-GLLIAT  139 (246)
T ss_dssp             CSSHHHHCSCHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             ecchhhhhhhHHHHHHHHHhhcCcC-cEEEEE
Confidence            5331       23577888999997 987753

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=96.85  E-value=0.0032  Score=51.41  Aligned_cols=74  Identities=20%  Similarity=0.165  Sum_probs=50.3

Q ss_pred             eEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcC----CceEEcCCCCChhHHHHHHHHcCCCccEEEEc
Q 018529          172 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG----VTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  246 (354)
Q Consensus       172 ~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg----~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~  246 (354)
                      +.||+|+ +++|.+.+..+...|+ +|+.++++.++.+.+++++    ...+.+.. +-+.+.+.+.+.. |+.|+++++
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga-~V~i~~r~~~~~~~~~~~~~~~~~~dv~~~~-~~~~~~~~~~~~~-G~iDiLVnN   78 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGH-TVACHDESFKQKDELEAFAETYPQLKPMSEQ-EPAELIEAVTSAY-GQVDVLVSN   78 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTC-EEEECCGGGGSHHHHHHHHHHCTTSEECCCC-SHHHHHHHHHHHH-SCCCEEEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHhhhCcEEEeccCCHH-HHHHHHHHHHHHc-CCCCEEEEC
Confidence            6789987 8999999988888999 8999999888877765532    22222221 1123444443332 479999987


Q ss_pred             cc
Q 018529          247 TG  248 (354)
Q Consensus       247 ~g  248 (354)
                      +|
T Consensus        79 Ag   80 (252)
T d1zmta1          79 DI   80 (252)
T ss_dssp             CC
T ss_pred             Cc
Confidence            65

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=96.85  E-value=0.0018  Score=53.10  Aligned_cols=79  Identities=23%  Similarity=0.235  Sum_probs=52.9

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----c--CCceE---EcCCCCC--hhHHHHHHHHc
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----F--GVTDF---VNTSEHD--RPIQEVIAEMT  236 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----l--g~~~v---~~~~~~~--~~~~~~i~~~~  236 (354)
                      +|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+.+    .  +....   .|..+.+  +.+.+.+.+..
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~   81 (258)
T d1iy8a_           3 TDRVVLITGGGSGLGRATAVRLAAEGA-KLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERF   81 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHh
Confidence            5789999987 9999999999999999 89999999988665422    2  22211   2333322  12222332222


Q ss_pred             CCCccEEEEcccC
Q 018529          237 NGGVDRSVECTGN  249 (354)
Q Consensus       237 ~~~~dvv~d~~g~  249 (354)
                       |+.|++++++|.
T Consensus        82 -G~iDiLVnnAG~   93 (258)
T d1iy8a_          82 -GRIDGFFNNAGI   93 (258)
T ss_dssp             -SCCSEEEECCCC
T ss_pred             -CCCCEEEECCcc
Confidence             479999998873

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=96.85  E-value=0.0022  Score=52.35  Aligned_cols=79  Identities=27%  Similarity=0.331  Sum_probs=54.1

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh-cCC--c-eEE--cCCCCC--hhHHHHHHHHcCCC
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGV--T-DFV--NTSEHD--RPIQEVIAEMTNGG  239 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~-lg~--~-~v~--~~~~~~--~~~~~~i~~~~~~~  239 (354)
                      +|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+.+ ++.  . ..+  |..+.+  +.+.+++.+.. |+
T Consensus         5 ~gK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-G~   82 (251)
T d1zk4a1           5 DGKVAIITGGTLGIGLAIATKFVEEGA-KVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAF-GP   82 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHH-SS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHh-CC
Confidence            5789999987 9999999999999999 89999999988776543 332  1 222  332221  12333333322 47


Q ss_pred             ccEEEEcccC
Q 018529          240 VDRSVECTGN  249 (354)
Q Consensus       240 ~dvv~d~~g~  249 (354)
                      +|++++++|.
T Consensus        83 iDiLVnnAg~   92 (251)
T d1zk4a1          83 VSTLVNNAGI   92 (251)
T ss_dssp             CCEEEECCCC
T ss_pred             ceEEEecccc
Confidence            9999999875

>d1zx0a1 c.66.1.16 (A:8-236) Guanidinoacetate methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Guanidinoacetate methyltransferase
domain: Guanidinoacetate methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.84  E-value=0.00017  Score=58.55  Aligned_cols=98  Identities=15%  Similarity=0.197  Sum_probs=66.1

Q ss_pred             CCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCC---ceEEcCCCCChhHHHHHHHHcCCCccEE
Q 018529          167 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV---TDFVNTSEHDRPIQEVIAEMTNGGVDRS  243 (354)
Q Consensus       167 ~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~---~~v~~~~~~~~~~~~~i~~~~~~~~dvv  243 (354)
                      ..+|.+||-+|+|. |..+..+++..+. +|++++.+++..+.+++...   ..+... ..+  +......+..+.||.+
T Consensus        51 ~~~g~~VLdIGcG~-G~~a~~~a~~~~~-~v~~id~s~~~~~~a~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~fD~i  125 (229)
T d1zx0a1          51 SSKGGRVLEVGFGM-AIAASKVQEAPID-EHWIIECNDGVFQRLRDWAPRQTHKVIPL-KGL--WEDVAPTLPDGHFDGI  125 (229)
T ss_dssp             TTTCEEEEEECCTT-SHHHHHHHTSCEE-EEEEEECCHHHHHHHHHHGGGCSSEEEEE-ESC--HHHHGGGSCTTCEEEE
T ss_pred             ccCCCeEEEeeccc-hHHHHHHHHcCCC-eEEEeCCCHHHHHHHHHHhhhcccccccc-ccc--ccccccccccccccce
Confidence            36789999999874 7788888887655 89999999999988876422   111111 111  4334444445589888


Q ss_pred             E-EcccC----------hHhHHHHHHHhhCCCceEEEE
Q 018529          244 V-ECTGN----------IDNMISAFECVHDGWGVAVLV  270 (354)
Q Consensus       244 ~-d~~g~----------~~~~~~~~~~l~~~~g~~v~~  270 (354)
                      + |....          ...++.+.+.|+++ |++++.
T Consensus       126 ~fD~~~~~~~~~~~~~~~~~~~~~~r~LkpG-G~~~~~  162 (229)
T d1zx0a1         126 LYDTYPLSEETWHTHQFNFIKNHAFRLLKPG-GVLTYC  162 (229)
T ss_dssp             EECCCCCBGGGTTTHHHHHHHHTHHHHEEEE-EEEEEC
T ss_pred             eecccccccccccccCHHHHHHHHHHHcCCC-cEEEEE
Confidence            4 54432          13566788899997 998865

>d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=96.84  E-value=0.004  Score=49.84  Aligned_cols=102  Identities=19%  Similarity=0.160  Sum_probs=68.6

Q ss_pred             hhcCCCCCCeEEEEcCChhHHHHHHHHHHcCC-cEEEEEcCChhhHHHHHhc----CCceEEcCCCCChhHHHHHHHHcC
Q 018529          163 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKKF----GVTDFVNTSEHDRPIQEVIAEMTN  237 (354)
Q Consensus       163 ~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~-~~vi~v~~~~~~~~~~~~l----g~~~v~~~~~~~~~~~~~i~~~~~  237 (354)
                      +...++||++||=+|+|. |..+..+|+..|. .+|++++.+++..+.+++.    +....+..+....   +... ...
T Consensus        67 ~~l~i~pG~~VLDlGaGs-G~~t~~la~~VG~~G~V~aVD~s~~~l~~a~~~a~~~~~~~~i~~d~~~~---~~~~-~~~  141 (227)
T d1g8aa_          67 KNFPIKPGKSVLYLGIAS-GTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKP---EEYR-ALV  141 (227)
T ss_dssp             CCCCCCTTCEEEEETTTS-TTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCG---GGGT-TTC
T ss_pred             cccccCCCCEEEEeccCC-CHHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHHhcCCceEEEEECCCc---cccc-ccc
Confidence            556899999999999875 8888899998864 3999999999988877542    3222222222211   1111 111


Q ss_pred             CCccEEEEcccCh----HhHHHHHHHhhCCCceEEEE
Q 018529          238 GGVDRSVECTGNI----DNMISAFECVHDGWGVAVLV  270 (354)
Q Consensus       238 ~~~dvv~d~~g~~----~~~~~~~~~l~~~~g~~v~~  270 (354)
                      ..+|+++..+..+    ..+..+.+.|+++ |+++++
T Consensus       142 ~~vD~i~~d~~~~~~~~~~l~~~~~~Lkpg-G~lvi~  177 (227)
T d1g8aa_         142 PKVDVIFEDVAQPTQAKILIDNAEVYLKRG-GYGMIA  177 (227)
T ss_dssp             CCEEEEEECCCSTTHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             cceEEEEEEccccchHHHHHHHHHHhcccC-CeEEEE
Confidence            3688888665432    2577888899997 988764

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=96.84  E-value=0.0024  Score=53.41  Aligned_cols=80  Identities=14%  Similarity=0.187  Sum_probs=53.0

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-----HhcCCce-EEcCCCCCh-hHHHHHHHHc--CC
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-----KKFGVTD-FVNTSEHDR-PIQEVIAEMT--NG  238 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-----~~lg~~~-v~~~~~~~~-~~~~~i~~~~--~~  238 (354)
                      +|+++||+|+ +++|.+.+..+...|+ +|+.+++++++.+.+     .+.|... .+..+-.+. +..+.+....  .+
T Consensus        24 ~gK~alITGas~GIG~aiA~~la~~Ga-~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g  102 (294)
T d1w6ua_          24 QGKVAFITGGGTGLGKGMTTLLSSLGA-QCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAG  102 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhhcc
Confidence            5799999987 9999999999899999 999999998775433     2334432 222222221 2222222221  24


Q ss_pred             CccEEEEcccC
Q 018529          239 GVDRSVECTGN  249 (354)
Q Consensus       239 ~~dvv~d~~g~  249 (354)
                      ++|++++++|.
T Consensus       103 ~iDilvnnAg~  113 (294)
T d1w6ua_         103 HPNIVINNAAG  113 (294)
T ss_dssp             SCSEEEECCCC
T ss_pred             ccchhhhhhhh
Confidence            79999999875

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=96.84  E-value=0.0051  Score=46.74  Aligned_cols=91  Identities=15%  Similarity=0.162  Sum_probs=62.5

Q ss_pred             eEEEEcCChhHHHHHHHHHHcCCc-EEEEEcCChhhHHHHHhcCC-ceEEcCCCCChhHHHHHHHHcCCCccEEEEcccC
Q 018529          172 SVAVFGLGAVGLAAAEGARIAGAS-RIIGVDRSSKRFEEAKKFGV-TDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN  249 (354)
Q Consensus       172 ~vlI~G~g~~G~~a~~~a~~~g~~-~vi~v~~~~~~~~~~~~lg~-~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~  249 (354)
                      +|+|+|+|.+|...+.-++..|.. +|++.+++++..+.+++.+. +......+.          ......|+|+-|+..
T Consensus         3 ~I~IIG~G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~~~~----------~~~~~~dlIila~p~   72 (171)
T d2g5ca2           3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAK----------VEDFSPDFVMLSSPV   72 (171)
T ss_dssp             EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGG----------GGGTCCSEEEECSCH
T ss_pred             EEEEEccCHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhhhhhhh----------hhccccccccccCCc
Confidence            699999999999988888888753 89999999999999999886 333322111          111257899988875


Q ss_pred             hH---hHHHHHHHhhCCCceEEEEcCC
Q 018529          250 ID---NMISAFECVHDGWGVAVLVGVP  273 (354)
Q Consensus       250 ~~---~~~~~~~~l~~~~g~~v~~g~~  273 (354)
                      ..   .++...+.+.++ ..++.++..
T Consensus        73 ~~~~~vl~~l~~~~~~~-~ii~d~~s~   98 (171)
T d2g5ca2          73 RTFREIAKKLSYILSED-ATVTDQGSV   98 (171)
T ss_dssp             HHHHHHHHHHHHHSCTT-CEEEECCSC
T ss_pred             hhhhhhhhhhhcccccc-ccccccccc
Confidence            33   233444556665 555555543

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=96.82  E-value=0.0028  Score=51.89  Aligned_cols=78  Identities=21%  Similarity=0.283  Sum_probs=52.6

Q ss_pred             CCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH----HhcCCceE---EcCCCCC--hhHHHHHHHHcCCC
Q 018529          170 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTDF---VNTSEHD--RPIQEVIAEMTNGG  239 (354)
Q Consensus       170 ~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~----~~lg~~~v---~~~~~~~--~~~~~~i~~~~~~~  239 (354)
                      |+.+||+|+ +++|.+.+..+...|+ +|+.+++++++.+.+    ++.|....   .|..+.+  +.+.+.+.+.. ++
T Consensus         2 gKValITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~-g~   79 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKEGL-RVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERY-GP   79 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT-CS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHh-CC
Confidence            567799987 9999999998889999 899999998876654    34555332   2333322  12223333322 47


Q ss_pred             ccEEEEcccC
Q 018529          240 VDRSVECTGN  249 (354)
Q Consensus       240 ~dvv~d~~g~  249 (354)
                      .|++++++|.
T Consensus        80 iDilVnnAG~   89 (257)
T d2rhca1          80 VDVLVNNAGR   89 (257)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEecccc
Confidence            9999999885

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.82  E-value=0.0018  Score=53.05  Aligned_cols=79  Identities=20%  Similarity=0.299  Sum_probs=53.4

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH-hc----CCceE----EcCCCCChhHHHHHHHHcC-
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KF----GVTDF----VNTSEHDRPIQEVIAEMTN-  237 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~-~l----g~~~v----~~~~~~~~~~~~~i~~~~~-  237 (354)
                      .|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+. ++    +...+    .|..+.+ ++.+.+++... 
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~-~v~~~~~~~~~~   79 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKGA-KVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQ-QLRDTFRKVVDH   79 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHH-HHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHH-HHHHHHHHHHHH
Confidence            4789999987 9999999999999999 8999999998866543 22    22122    2333322 23333322221 


Q ss_pred             -CCccEEEEcccC
Q 018529          238 -GGVDRSVECTGN  249 (354)
Q Consensus       238 -~~~dvv~d~~g~  249 (354)
                       |++|++++++|.
T Consensus        80 ~G~iDilVnnAg~   92 (254)
T d2gdza1          80 FGRLDILVNNAGV   92 (254)
T ss_dssp             HSCCCEEEECCCC
T ss_pred             cCCcCeecccccc
Confidence             479999999885

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=96.80  E-value=0.002  Score=52.97  Aligned_cols=79  Identities=19%  Similarity=0.215  Sum_probs=51.4

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChh-hHH----HHHhcCCceEE---cCCCCC--hhHHHHHHHHcC
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSK-RFE----EAKKFGVTDFV---NTSEHD--RPIQEVIAEMTN  237 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~-~~~----~~~~lg~~~v~---~~~~~~--~~~~~~i~~~~~  237 (354)
                      +|+++||+|+ +++|.+.++.+...|+ +|+.++++.+ +.+    .+++.|.....   |..+.+  +.+.+.+.+.. 
T Consensus         6 ~gK~alITGas~GIG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~-   83 (261)
T d1geea_           6 EGKVVVITGSSTGLGKSMAIRFATEKA-KVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEF-   83 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh-
Confidence            5789999987 9999999888888999 8888888753 333    34456654322   333221  12222222222 


Q ss_pred             CCccEEEEcccC
Q 018529          238 GGVDRSVECTGN  249 (354)
Q Consensus       238 ~~~dvv~d~~g~  249 (354)
                      |++|++++++|.
T Consensus        84 G~iDiLVnnAG~   95 (261)
T d1geea_          84 GKLDVMINNAGL   95 (261)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEeecccee
Confidence            479999999875

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.77  E-value=0.0035  Score=52.54  Aligned_cols=81  Identities=16%  Similarity=0.248  Sum_probs=53.6

Q ss_pred             CCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-Hhc--------CCceE---EcCCCCChhHHHHHH
Q 018529          167 PERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKF--------GVTDF---VNTSEHDRPIQEVIA  233 (354)
Q Consensus       167 ~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~~l--------g~~~v---~~~~~~~~~~~~~i~  233 (354)
                      .-+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+ +++        +....   .|..+. +++.+.++
T Consensus         9 ~L~gKvalITGas~GIG~aia~~la~~Ga-~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~-~~v~~~~~   86 (297)
T d1yxma1           9 LLQGQVAIVTGGATGIGKAIVKELLELGS-NVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNE-EEVNNLVK   86 (297)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCH-HHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCH-HHHHHHHH
Confidence            457899999987 9999999999999999 899999998876543 222        22221   222222 12222233


Q ss_pred             HHcC--CCccEEEEcccC
Q 018529          234 EMTN--GGVDRSVECTGN  249 (354)
Q Consensus       234 ~~~~--~~~dvv~d~~g~  249 (354)
                      +...  ++.|++++++|.
T Consensus        87 ~~~~~~G~iDiLVnnAg~  104 (297)
T d1yxma1          87 STLDTFGKINFLVNNGGG  104 (297)
T ss_dssp             HHHHHHSCCCEEEECCCC
T ss_pred             HHHHHhCCeEEEEeeccc
Confidence            2221  479999999875

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=96.77  E-value=0.0061  Score=45.40  Aligned_cols=82  Identities=24%  Similarity=0.284  Sum_probs=55.3

Q ss_pred             eEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh-cCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcccCh
Q 018529          172 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI  250 (354)
Q Consensus       172 ~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~-lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~~  250 (354)
                      +|.++|+|.+|.+.++-+...|..+|++.++++++.+.+.+ +|+... ...+.   .         ...|+||-++. |
T Consensus         2 kI~fIG~G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~~~~~~-~~~~~---v---------~~~Div~lavk-P   67 (152)
T d1yqga2           2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVETS-ATLPE---L---------HSDDVLILAVK-P   67 (152)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCEEE-SSCCC---C---------CTTSEEEECSC-H
T ss_pred             EEEEEcCcHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhcccccc-ccccc---c---------cccceEEEecC-H
Confidence            57889999999987764434453499999999999887654 676432 22111   1         14799998885 4


Q ss_pred             HhHHHHHHHhhCCCceEE
Q 018529          251 DNMISAFECVHDGWGVAV  268 (354)
Q Consensus       251 ~~~~~~~~~l~~~~g~~v  268 (354)
                      ..+....+-+.+. +..+
T Consensus        68 ~~~~~v~~~l~~~-~~~v   84 (152)
T d1yqga2          68 QDMEAACKNIRTN-GALV   84 (152)
T ss_dssp             HHHHHHHTTCCCT-TCEE
T ss_pred             HHHHHhHHHHhhc-ccEE
Confidence            6667777666665 5544

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=96.75  E-value=0.0018  Score=43.98  Aligned_cols=72  Identities=18%  Similarity=0.240  Sum_probs=47.2

Q ss_pred             CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChh--hHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEc
Q 018529          169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK--RFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  246 (354)
Q Consensus       169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~--~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~  246 (354)
                      +|++|+|+|.|..|+++++++...|+ +|++.+.+..  ..+.+++ +....+...  +..   .+.     .+|.|+-+
T Consensus         4 ~~K~v~ViGlG~sG~s~a~~L~~~g~-~v~~~D~~~~~~~~~~~~~-~~~~~~~~~--~~~---~~~-----~~d~vi~S   71 (93)
T d2jfga1           4 QGKNVVIIGLGLTGLSCVDFFLARGV-TPRVMDTRMTPPGLDKLPE-AVERHTGSL--NDE---WLM-----AADLIVAS   71 (93)
T ss_dssp             TTCCEEEECCSHHHHHHHHHHHHTTC-CCEEEESSSSCTTGGGSCT-TSCEEESBC--CHH---HHH-----HCSEEEEC
T ss_pred             CCCEEEEEeECHHHHHHHHHHHHCCC-EEEEeeCCcCchhHHHHhh-ccceeeccc--chh---hhc-----cCCEEEEC
Confidence            47889999999999999999999999 8999987543  2222222 222222221  111   121     37999988


Q ss_pred             ccChHh
Q 018529          247 TGNIDN  252 (354)
Q Consensus       247 ~g~~~~  252 (354)
                      .|-+..
T Consensus        72 PGi~~~   77 (93)
T d2jfga1          72 PGIALA   77 (93)
T ss_dssp             TTSCTT
T ss_pred             CCCCCC
Confidence            886443

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.75  E-value=0.0015  Score=54.06  Aligned_cols=79  Identities=27%  Similarity=0.345  Sum_probs=53.3

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH----hcCC--ceE----EcCCCCC--hhHHHHHHHH
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGV--TDF----VNTSEHD--RPIQEVIAEM  235 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~----~lg~--~~v----~~~~~~~--~~~~~~i~~~  235 (354)
                      +|+++||+|+ +++|.+.+..+...|+ +|+.+++++++.+.+.    +.+.  ..+    .|..+.+  +.+.+.+.+.
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga-~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~   82 (272)
T d1xkqa_           4 SNKTVIITGSSNGIGRTTAILFAQEGA-NVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQ   82 (272)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            5788999987 9999999999999999 8999999998876543    3332  112    2333322  1223333222


Q ss_pred             cCCCccEEEEcccC
Q 018529          236 TNGGVDRSVECTGN  249 (354)
Q Consensus       236 ~~~~~dvv~d~~g~  249 (354)
                      . +++|++++++|.
T Consensus        83 ~-g~iDilvnnAG~   95 (272)
T d1xkqa_          83 F-GKIDVLVNNAGA   95 (272)
T ss_dssp             H-SCCCEEEECCCC
T ss_pred             h-CCceEEEeCCcc
Confidence            2 479999998774

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.75  E-value=0.0065  Score=47.94  Aligned_cols=102  Identities=17%  Similarity=0.035  Sum_probs=66.6

Q ss_pred             hhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCceEEcCCCCChhHHHHHHHHcCC
Q 018529          163 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTNG  238 (354)
Q Consensus       163 ~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~~~~~  238 (354)
                      ....++||++||=+|||. |..+..+++..+..+|++++.+++..+.+++    .+....+..+..+...   .. ....
T Consensus        50 ~~l~lkpg~~VLDlGcG~-G~~~~~la~~v~~g~V~gvDis~~~i~~a~~~a~~~~ni~~i~~d~~~~~~---~~-~~~~  124 (209)
T d1nt2a_          50 HRLKLRGDERVLYLGAAS-GTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWK---YS-GIVE  124 (209)
T ss_dssp             CCCCCCSSCEEEEETCTT-SHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGG---TT-TTCC
T ss_pred             ccCCCCCCCEEEEeCCcC-CHHHHHHHHhccCCeEEEEeCCHHHHHHHHHHhhccCCceEEEeeccCccc---cc-cccc
Confidence            346799999999999875 6788888888875699999999988877644    3322222222211100   00 0112


Q ss_pred             CccEEEEcccCh----HhHHHHHHHhhCCCceEEEE
Q 018529          239 GVDRSVECTGNI----DNMISAFECVHDGWGVAVLV  270 (354)
Q Consensus       239 ~~dvv~d~~g~~----~~~~~~~~~l~~~~g~~v~~  270 (354)
                      .+|+++.....+    ..+..+.+.|+++ |+++++
T Consensus       125 ~vd~v~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~i~  159 (209)
T d1nt2a_         125 KVDLIYQDIAQKNQIEILKANAEFFLKEK-GEVVIM  159 (209)
T ss_dssp             CEEEEEECCCSTTHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             eEEEEEecccChhhHHHHHHHHHHHhccC-CeEEEE
Confidence            577777654332    3567788899997 998765

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.75  E-value=0.0016  Score=53.95  Aligned_cols=79  Identities=29%  Similarity=0.366  Sum_probs=53.2

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH----hcCC--ceE----EcCCCCC--hhHHHHHHHH
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGV--TDF----VNTSEHD--RPIQEVIAEM  235 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~----~lg~--~~v----~~~~~~~--~~~~~~i~~~  235 (354)
                      +|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+.    +.|.  ..+    .|..+.+  +.+.+.+.+.
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   81 (274)
T d1xhla_           3 SGKSVIITGSSNGIGRSAAVIFAKEGA-QVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAK   81 (274)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHH
Confidence            5789999987 9999999999999999 8999999988876543    3342  122    2333322  1222333322


Q ss_pred             cCCCccEEEEcccC
Q 018529          236 TNGGVDRSVECTGN  249 (354)
Q Consensus       236 ~~~~~dvv~d~~g~  249 (354)
                      . |+.|++++++|.
T Consensus        82 ~-G~iDilVnnAG~   94 (274)
T d1xhla_          82 F-GKIDILVNNAGA   94 (274)
T ss_dssp             H-SCCCEEEECCCC
T ss_pred             c-CCceEEEeeccc
Confidence            2 479999998874

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=96.74  E-value=0.0041  Score=47.44  Aligned_cols=72  Identities=15%  Similarity=0.125  Sum_probs=50.2

Q ss_pred             CCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh-cC---CceEEcCCCCChhHHHHHHHHcCCCcc
Q 018529          166 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FG---VTDFVNTSEHDRPIQEVIAEMTNGGVD  241 (354)
Q Consensus       166 ~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~-lg---~~~v~~~~~~~~~~~~~i~~~~~~~~d  241 (354)
                      -..++++|+|+|+|+++.+++..+...+. +|+.+.|+.++.+.+.+ ++   ....+...+           .....+|
T Consensus        14 ~~~~~k~vlIlGaGGaarai~~aL~~~~~-~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~~-----------~~~~~~d   81 (171)
T d1p77a1          14 WLRPNQHVLILGAGGATKGVLLPLLQAQQ-NIVLANRTFSKTKELAERFQPYGNIQAVSMDS-----------IPLQTYD   81 (171)
T ss_dssp             CCCTTCEEEEECCSHHHHTTHHHHHHTTC-EEEEEESSHHHHHHHHHHHGGGSCEEEEEGGG-----------CCCSCCS
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHcccCc-eeeeccchHHHHHHHHHHHhhccccchhhhcc-----------ccccccc
Confidence            34578899999999999998887776554 89999999988776533 33   212222111           1113689


Q ss_pred             EEEEcccC
Q 018529          242 RSVECTGN  249 (354)
Q Consensus       242 vv~d~~g~  249 (354)
                      ++++|++.
T Consensus        82 iiIN~tp~   89 (171)
T d1p77a1          82 LVINATSA   89 (171)
T ss_dssp             EEEECCCC
T ss_pred             eeeecccc
Confidence            99999875

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=96.73  E-value=0.0016  Score=53.74  Aligned_cols=79  Identities=22%  Similarity=0.318  Sum_probs=52.5

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH----hcCC--ceE----EcCCCCChhHHHHHHHHcC
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGV--TDF----VNTSEHDRPIQEVIAEMTN  237 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~----~lg~--~~v----~~~~~~~~~~~~~i~~~~~  237 (354)
                      +|+.+||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+.    +.+.  ..+    .|..+.+ ++.+.+++...
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~-~v~~~~~~~~~   81 (264)
T d1spxa_           4 AEKVAIITGSSNGIGRATAVLFAREGA-KVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDA-GQDEILSTTLG   81 (264)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHH-HHHHHHHHHHH
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHH-HHHHHHHHHHH
Confidence            5788899987 9999999999999999 8999999988876543    2332  112    2333322 22222322221


Q ss_pred             --CCccEEEEcccC
Q 018529          238 --GGVDRSVECTGN  249 (354)
Q Consensus       238 --~~~dvv~d~~g~  249 (354)
                        ++.|++++++|.
T Consensus        82 ~~g~iDilvnnAG~   95 (264)
T d1spxa_          82 KFGKLDILVNNAGA   95 (264)
T ss_dssp             HHSCCCEEEECCC-
T ss_pred             HhCCCCEeeccccc
Confidence              479999999874

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=96.70  E-value=0.0021  Score=52.82  Aligned_cols=79  Identities=25%  Similarity=0.310  Sum_probs=53.0

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-----HhcCCceE---EcCCCCC--hhHHHHHHHHcC
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-----KKFGVTDF---VNTSEHD--RPIQEVIAEMTN  237 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-----~~lg~~~v---~~~~~~~--~~~~~~i~~~~~  237 (354)
                      +|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+     +++|....   .|..+.+  +.+.+.+.+.. 
T Consensus         8 ~gK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~-   85 (260)
T d1h5qa_           8 VNKTIIVTGGNRGIGLAFTRAVAAAGA-NVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADL-   85 (260)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHS-
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHh-
Confidence            4789999987 8999999999999999 899999988765432     34565332   2333222  12233333322 


Q ss_pred             CCccEEEEcccC
Q 018529          238 GGVDRSVECTGN  249 (354)
Q Consensus       238 ~~~dvv~d~~g~  249 (354)
                      +++|++++++|.
T Consensus        86 g~iDilVnnAg~   97 (260)
T d1h5qa_          86 GPISGLIANAGV   97 (260)
T ss_dssp             CSEEEEEECCCC
T ss_pred             CCCcEecccccc
Confidence            479999998874

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=96.67  E-value=0.0062  Score=49.76  Aligned_cols=84  Identities=19%  Similarity=0.243  Sum_probs=53.5

Q ss_pred             CCCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhh-------HHHHHhcCCceE-EcCCCCC-hhHHHHHHHH
Q 018529          166 KPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR-------FEEAKKFGVTDF-VNTSEHD-RPIQEVIAEM  235 (354)
Q Consensus       166 ~~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~-------~~~~~~lg~~~v-~~~~~~~-~~~~~~i~~~  235 (354)
                      ..+|+.++||+|+ |++|.+.+..+...|+++|+.+.|+..+       .+.+++.|.... +..+-.+ .++.+.+..+
T Consensus         5 ~~~p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i   84 (259)
T d2fr1a1           5 EWKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGI   84 (259)
T ss_dssp             CCCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTS
T ss_pred             ccCCcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhccc
Confidence            5789999999987 9999998888888898667777665322       223345666432 2222222 2233334444


Q ss_pred             cCC-CccEEEEcccC
Q 018529          236 TNG-GVDRSVECTGN  249 (354)
Q Consensus       236 ~~~-~~dvv~d~~g~  249 (354)
                      ... +.|.++.+.|.
T Consensus        85 ~~~~~i~~vv~~ag~   99 (259)
T d2fr1a1          85 GDDVPLSAVFHAAAT   99 (259)
T ss_dssp             CTTSCEEEEEECCCC
T ss_pred             ccccccccccccccc
Confidence            333 78999998875

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.64  E-value=0.0071  Score=45.51  Aligned_cols=89  Identities=18%  Similarity=0.243  Sum_probs=63.8

Q ss_pred             eEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcccChH
Q 018529          172 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNID  251 (354)
Q Consensus       172 ~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~~~  251 (354)
                      +|-|+|.|.+|...+.-+...|. .|++.++++++.+.+++.+... .  .+    ..+.+++     .|+||-|+..++
T Consensus         2 kIgiIGlG~MG~~~A~~L~~~G~-~V~~~d~~~~~~~~~~~~~~~~-~--~~----~~e~~~~-----~d~ii~~v~~~~   68 (161)
T d1vpda2           2 KVGFIGLGIMGKPMSKNLLKAGY-SLVVSDRNPEAIADVIAAGAET-A--ST----AKAIAEQ-----CDVIITMLPNSP   68 (161)
T ss_dssp             EEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEE-C--SS----HHHHHHH-----CSEEEECCSSHH
T ss_pred             EEEEEehhHHHHHHHHHHHHCCC-eEEEEeCCcchhHHHHHhhhhh-c--cc----HHHHHhC-----CCeEEEEcCCHH
Confidence            47789999999998887778899 8999999999999998888642 1  11    3333333     799999998766


Q ss_pred             hHHHHH-------HHhhCCCceEEEEcCCC
Q 018529          252 NMISAF-------ECVHDGWGVAVLVGVPS  274 (354)
Q Consensus       252 ~~~~~~-------~~l~~~~g~~v~~g~~~  274 (354)
                      ..+..+       ..+.++ ..++.+++..
T Consensus        69 ~v~~v~~~~~~~~~~~~~g-~iiid~sT~~   97 (161)
T d1vpda2          69 HVKEVALGENGIIEGAKPG-TVLIDMSSIA   97 (161)
T ss_dssp             HHHHHHHSTTCHHHHCCTT-CEEEECSCCC
T ss_pred             HHHHHHhCCcchhhccCCC-CEEEECCCCC
Confidence            655543       344554 5666665544

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=96.63  E-value=0.0051  Score=50.22  Aligned_cols=79  Identities=23%  Similarity=0.292  Sum_probs=51.7

Q ss_pred             CCCeEEEEcC-C--hhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCceEEcCCCCCh-h---HHHHHHHHcC
Q 018529          169 RGSSVAVFGL-G--AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDR-P---IQEVIAEMTN  237 (354)
Q Consensus       169 ~~~~vlI~G~-g--~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~-~---~~~~i~~~~~  237 (354)
                      +|+++||+|+ |  ++|.+.++.+...|+ +|+.++++++..+.+++    .+....+..+-.+. +   +.+.+.+.. 
T Consensus         7 ~gK~alITGas~~~GIG~aiA~~la~~Ga-~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-   84 (256)
T d1ulua_           7 SGKKALVMGVTNQRSLGFAIAAKLKEAGA-EVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAF-   84 (256)
T ss_dssp             TTCEEEEESCCCSSSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHHhc-
Confidence            5889999997 5  799998888888899 88888888765554432    34333433332221 2   223333322 


Q ss_pred             CCccEEEEcccC
Q 018529          238 GGVDRSVECTGN  249 (354)
Q Consensus       238 ~~~dvv~d~~g~  249 (354)
                      ++.|++++++|.
T Consensus        85 g~iDilVnnag~   96 (256)
T d1ulua_          85 GGLDYLVHAIAF   96 (256)
T ss_dssp             SSEEEEEECCCC
T ss_pred             CCceEEEecccc
Confidence            479999998864

>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Putative sarcosine dimethylglycine methyltransferase
species: Red algae (Galdieria sulphuraria) [TaxId: 130081]

Probab=96.62  E-value=0.0017  Score=54.03  Aligned_cols=102  Identities=15%  Similarity=0.088  Sum_probs=69.7

Q ss_pred             hhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCc-e--EEcCCCCChhHHHHHH
Q 018529          161 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT-D--FVNTSEHDRPIQEVIA  233 (354)
Q Consensus       161 l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~-~--v~~~~~~~~~~~~~i~  233 (354)
                      +.....++++.+||=+|||. |..+..+++..|+ +|++++.++...+.+++    .|.. .  ++..+-.+  +     
T Consensus        59 l~~~~~l~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~i~~a~~~~~~~gl~~~v~~~~~d~~~--l-----  129 (282)
T d2o57a1          59 LAMTGVLQRQAKGLDLGAGY-GGAARFLVRKFGV-SIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLE--I-----  129 (282)
T ss_dssp             HHHTTCCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTS--C-----
T ss_pred             HHHhcCCCCCCEEEEeCCCC-cHHHhhhhccCCc-EEEEEeccchhhhhhhccccccccccccccccccccc--c-----
Confidence            34567899999999999974 7778888888898 89999999988777654    3432 1  22111111  0     


Q ss_pred             HHcCCCccEEEEccc-----C-hHhHHHHHHHhhCCCceEEEEcC
Q 018529          234 EMTNGGVDRSVECTG-----N-IDNMISAFECVHDGWGVAVLVGV  272 (354)
Q Consensus       234 ~~~~~~~dvv~d~~g-----~-~~~~~~~~~~l~~~~g~~v~~g~  272 (354)
                      .+..+.||+|+..-.     . ...+..+.+.|+++ |++++...
T Consensus       130 ~~~~~sfD~V~~~~~l~h~~d~~~~l~~~~~~Lkpg-G~l~~~~~  173 (282)
T d2o57a1         130 PCEDNSYDFIWSQDAFLHSPDKLKVFQECARVLKPR-GVMAITDP  173 (282)
T ss_dssp             SSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             cccccccchhhccchhhhccCHHHHHHHHHHhcCCC-cEEEEEEe
Confidence            012247999986321     1 24678899999997 99887653

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=96.55  E-value=0.0056  Score=49.97  Aligned_cols=76  Identities=22%  Similarity=0.202  Sum_probs=50.6

Q ss_pred             eEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH----HhcCCceE---EcCCCCC--hhHHHHHHHHcCCCcc
Q 018529          172 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTDF---VNTSEHD--RPIQEVIAEMTNGGVD  241 (354)
Q Consensus       172 ~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~----~~lg~~~v---~~~~~~~--~~~~~~i~~~~~~~~d  241 (354)
                      .+||+|+ +++|.+.+..+...|+ +|+.+++++++.+.+    ++.|....   .|..+.+  +.+.+.+.+.. |++|
T Consensus         3 ValITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~iD   80 (255)
T d1gega_           3 VALVTGAGQGIGKAIALRLVKDGF-AVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTL-GGFD   80 (255)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHT-TCCC
T ss_pred             EEEEcCCccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh-CCcc
Confidence            4588987 8999998888888899 899999999887654    34554322   2333321  12223332222 4799


Q ss_pred             EEEEcccC
Q 018529          242 RSVECTGN  249 (354)
Q Consensus       242 vv~d~~g~  249 (354)
                      ++++++|.
T Consensus        81 ilVnnAG~   88 (255)
T d1gega_          81 VIVNNAGV   88 (255)
T ss_dssp             EEEECCCC
T ss_pred             EEEecccc
Confidence            99999875

>d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.50  E-value=0.013  Score=46.91  Aligned_cols=102  Identities=17%  Similarity=0.127  Sum_probs=65.4

Q ss_pred             hhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhc----CCceEEcCCCCChhHHHHHHHHcCC
Q 018529          163 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF----GVTDFVNTSEHDRPIQEVIAEMTNG  238 (354)
Q Consensus       163 ~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~l----g~~~v~~~~~~~~~~~~~i~~~~~~  238 (354)
                      +...++||++||=+|||. |..+..+|+......|++++.+++..+.+++.    +....+........   ..... ..
T Consensus        68 ~~l~ikpG~~VLDlGcGs-G~~~~~la~~~~~g~V~aVDiS~~~i~~a~~~a~~~~ni~~i~~d~~~~~---~~~~~-~~  142 (230)
T d1g8sa_          68 KVMPIKRDSKILYLGASA-GTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQ---EYANI-VE  142 (230)
T ss_dssp             CCCCCCTTCEEEEESCCS-SHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGG---GGTTT-CC
T ss_pred             HhCCCCCCCEEEEeCEEc-CHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHhhhcccceEEEeeccCc---ccccc-cc
Confidence            556799999999999874 78888888875444999999999888877653    22222222222110   01111 11


Q ss_pred             CccEEEEcccCh----HhHHHHHHHhhCCCceEEEE
Q 018529          239 GVDRSVECTGNI----DNMISAFECVHDGWGVAVLV  270 (354)
Q Consensus       239 ~~dvv~d~~g~~----~~~~~~~~~l~~~~g~~v~~  270 (354)
                      .+|+++......    ..+..+.+.|+++ |++++.
T Consensus       143 ~v~~i~~~~~~~~~~~~~l~~~~r~LKpg-G~~~i~  177 (230)
T d1g8sa_         143 KVDVIYEDVAQPNQAEILIKNAKWFLKKG-GYGMIA  177 (230)
T ss_dssp             CEEEEEECCCSTTHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             eeEEeeccccchHHHHHHHHHHHHhcccC-ceEEEE
Confidence            455666654322    3467788889997 987765

>d1nw3a_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.47  E-value=0.022  Score=48.10  Aligned_cols=104  Identities=15%  Similarity=0.150  Sum_probs=68.9

Q ss_pred             hhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh-----------cCC----ceEEcCCCCC
Q 018529          161 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-----------FGV----TDFVNTSEHD  225 (354)
Q Consensus       161 l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~-----------lg~----~~v~~~~~~~  225 (354)
                      +++..+++++++||=+|+|. |..+.++|+..+..++++++.+++..+.+++           +|.    -.++..+-.+
T Consensus       143 ~~~~~~l~~~~~vlD~GcG~-G~~~~~~a~~~~~~~~~Gid~s~~~~~~a~~~~~~~~~~~~~~g~~~~~i~~~~gd~~~  221 (328)
T d1nw3a_         143 MIDEIKMTDDDLFVDLGSGV-GQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLS  221 (328)
T ss_dssp             HHHHSCCCTTCEEEEETCTT-SHHHHHHHHHCCCSEEEEEECSHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEECCTTS
T ss_pred             HHHHcCCCCCCEEEEcCCCC-CHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHhhhccccCCceEEEECcccc
Confidence            56788999999999999874 8888999999998789999999987776643           122    1122222222


Q ss_pred             hhHHHHHHHHcCCCccEEEEccc--Ch---HhHHHHHHHhhCCCceEEEEc
Q 018529          226 RPIQEVIAEMTNGGVDRSVECTG--NI---DNMISAFECVHDGWGVAVLVG  271 (354)
Q Consensus       226 ~~~~~~i~~~~~~~~dvv~d~~g--~~---~~~~~~~~~l~~~~g~~v~~g  271 (354)
                      ..+.+.+.+     +|+|+...-  .+   ..+...++.|+++ |+++..-
T Consensus       222 ~~~~~~~~~-----advi~~~~~~f~~~~~~~l~e~~r~LKpG-g~iv~~~  266 (328)
T d1nw3a_         222 EEWRERIAN-----TSVIFVNNFAFGPEVDHQLKERFANMKEG-GRIVSSK  266 (328)
T ss_dssp             HHHHHHHHH-----CSEEEECCTTTCHHHHHHHHHHHTTCCTT-CEEEESS
T ss_pred             cccccccCc-----ceEEEEcceecchHHHHHHHHHHHhCCCC-cEEEEec
Confidence            223333322     588874211  22   3456677789997 9998754

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=96.47  E-value=0.014  Score=47.06  Aligned_cols=100  Identities=21%  Similarity=0.245  Sum_probs=61.3

Q ss_pred             CeEEEEcC-ChhHHHHHHHHHHcCCcEEEEE-cCChhhHHHH----HhcCCceE-E--cCCCCC--hhHHHHHHHHcCCC
Q 018529          171 SSVAVFGL-GAVGLAAAEGARIAGASRIIGV-DRSSKRFEEA----KKFGVTDF-V--NTSEHD--RPIQEVIAEMTNGG  239 (354)
Q Consensus       171 ~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v-~~~~~~~~~~----~~lg~~~v-~--~~~~~~--~~~~~~i~~~~~~~  239 (354)
                      ..+||+|+ +++|.+.++.+...|+ +|+.. .+++++.+.+    ++.|.... +  |..+.+  +.+.+.+.+.. ++
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga-~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~   79 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGC-KVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAW-GT   79 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHS-SC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHc-CC
Confidence            35788887 9999999999989999 67665 5566655543    34555322 2  333221  12333333332 47


Q ss_pred             ccEEEEcccCh-------------------------HhHHHHHHHh--hCCCceEEEEcCC
Q 018529          240 VDRSVECTGNI-------------------------DNMISAFECV--HDGWGVAVLVGVP  273 (354)
Q Consensus       240 ~dvv~d~~g~~-------------------------~~~~~~~~~l--~~~~g~~v~~g~~  273 (354)
                      +|++++++|..                         ...+.++..|  ..+ |+++.++..
T Consensus        80 iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~-G~IVnisS~  139 (244)
T d1edoa_          80 IDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRK-GRIINIASV  139 (244)
T ss_dssp             CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC-EEEEEECCT
T ss_pred             CCccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCC-cEEEEEcCh
Confidence            99999998752                         1233445544  344 999999864

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=96.44  E-value=0.0015  Score=53.30  Aligned_cols=78  Identities=14%  Similarity=0.232  Sum_probs=49.9

Q ss_pred             CeEEEEcC-ChhHHHHHHHHH---HcCCcEEEEEcCChhhHHHHHhc---CCc-eE--EcCCCCC--hhHHHHHHHHcC-
Q 018529          171 SSVAVFGL-GAVGLAAAEGAR---IAGASRIIGVDRSSKRFEEAKKF---GVT-DF--VNTSEHD--RPIQEVIAEMTN-  237 (354)
Q Consensus       171 ~~vlI~G~-g~~G~~a~~~a~---~~g~~~vi~v~~~~~~~~~~~~l---g~~-~v--~~~~~~~--~~~~~~i~~~~~-  237 (354)
                      ++|||+|+ +++|.+.++.+.   ..|+ +|+.+.+++++.+.++++   +.. .+  .|..+.+  +.+.+.+++... 
T Consensus         3 KtilITGas~GIG~a~a~~l~~~a~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~   81 (248)
T d1snya_           3 NSILITGCNRGLGLGLVKALLNLPQPPQ-HLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKD   81 (248)
T ss_dssp             SEEEESCCSSHHHHHHHHHHHTSSSCCS-EEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGG
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhc
Confidence            57999997 999998776554   3477 899999999876655432   222 22  2333322  234444444433 


Q ss_pred             CCccEEEEcccC
Q 018529          238 GGVDRSVECTGN  249 (354)
Q Consensus       238 ~~~dvv~d~~g~  249 (354)
                      +++|++++++|.
T Consensus        82 ~~iDiLvnNAg~   93 (248)
T d1snya_          82 QGLNVLFNNAGI   93 (248)
T ss_dssp             GCCSEEEECCCC
T ss_pred             CCcceEEeeccc
Confidence            479999998774

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=96.41  E-value=0.0048  Score=50.87  Aligned_cols=81  Identities=10%  Similarity=0.103  Sum_probs=51.4

Q ss_pred             CCCCeEEEEcC-C--hhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCceEEcCCCCC-hhHHHHHHHHc--C
Q 018529          168 ERGSSVAVFGL-G--AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHD-RPIQEVIAEMT--N  237 (354)
Q Consensus       168 ~~~~~vlI~G~-g--~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~-~~~~~~i~~~~--~  237 (354)
                      -+|+++||+|+ |  ++|.+.++.+...|+ +|+.++++++..+.+++    .+...++...-.+ .+..+.+.+..  .
T Consensus         3 L~gK~alITGaag~~GIG~AiA~~la~~Ga-~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   81 (274)
T d2pd4a1           3 LKGKKGLIVGVANNKSIAYGIAQSCFNQGA-TLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDL   81 (274)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHTTTC-EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCEEEEECCCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHc
Confidence            35899999986 5  699999999999999 89999888754444432    2322332222222 22222232222  2


Q ss_pred             CCccEEEEcccC
Q 018529          238 GGVDRSVECTGN  249 (354)
Q Consensus       238 ~~~dvv~d~~g~  249 (354)
                      +++|+++.+.|.
T Consensus        82 g~id~lV~nag~   93 (274)
T d2pd4a1          82 GSLDFIVHSVAF   93 (274)
T ss_dssp             SCEEEEEECCCC
T ss_pred             CCCCeEEeeccc
Confidence            479999998874

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=96.38  E-value=0.021  Score=42.54  Aligned_cols=97  Identities=16%  Similarity=0.190  Sum_probs=58.4

Q ss_pred             CeEEEEcCChhHH-HHHHHHHHcCCcEEEEE-cCCh--hhHHHHHhcCCceEEcCCCCChhHHHHHHHHcC-CCccEEEE
Q 018529          171 SSVAVFGLGAVGL-AAAEGARIAGASRIIGV-DRSS--KRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTN-GGVDRSVE  245 (354)
Q Consensus       171 ~~vlI~G~g~~G~-~a~~~a~~~g~~~vi~v-~~~~--~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~-~~~dvv~d  245 (354)
                      =++.|+|+|.+|. +.+++++......++++ +++.  ....+++++|.....  .     ..+.+.+... .++|+||+
T Consensus         5 irvaIIGaG~ig~~~~~~~l~~~~~~el~avas~~~~~~~~~~a~~~~i~~~~--~-----~~d~l~~~~~~~~iDiVf~   77 (157)
T d1nvmb1           5 LKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTY--A-----GVEGLIKLPEFADIDFVFD   77 (157)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEES--S-----HHHHHHHSGGGGGEEEEEE
T ss_pred             cEEEEEcCcHHHHHHHHHHHhhCCcceEEEEEecchhccchhhhhhcCCcccc--c-----ceeeeeecccccccCEEEE
Confidence            3688999999987 56777776654456665 4444  345678888875421  1     2233333222 26999999


Q ss_pred             cccChHhHHHHHH--HhhCCCceEEEEcCCCCC
Q 018529          246 CTGNIDNMISAFE--CVHDGWGVAVLVGVPSKD  276 (354)
Q Consensus       246 ~~g~~~~~~~~~~--~l~~~~g~~v~~g~~~~~  276 (354)
                      +++.....+..+.  .++.  |..|.-..+...
T Consensus        78 ATpag~h~~~~~~~~aa~~--G~~VID~s~a~~  108 (157)
T d1nvmb1          78 ATSASAHVQNEALLRQAKP--GIRLIDLTPAAI  108 (157)
T ss_dssp             CSCHHHHHHHHHHHHHHCT--TCEEEECSTTCS
T ss_pred             cCCchhHHHhHHHHHHHHc--CCEEEEcccccc
Confidence            9876445554433  3544  666655554433

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=96.37  E-value=0.009  Score=48.29  Aligned_cols=96  Identities=17%  Similarity=0.264  Sum_probs=65.5

Q ss_pred             hhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhc----CCc-eEEcCCCCChhHHHHHHHH
Q 018529          161 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF----GVT-DFVNTSEHDRPIQEVIAEM  235 (354)
Q Consensus       161 l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~l----g~~-~v~~~~~~~~~~~~~i~~~  235 (354)
                      ++.....++.++||=+|||. |..+..+++ .|+ .|++++.+++-.+.+++.    +.. .++.- +        +.++
T Consensus        33 ~~~~~~~~~~~~iLDiGcGt-G~~~~~l~~-~~~-~v~gvD~s~~mi~~a~~~~~~~~~~i~~~~~-d--------~~~l  100 (251)
T d1wzna1          33 IFKEDAKREVRRVLDLACGT-GIPTLELAE-RGY-EVVGLDLHEEMLRVARRKAKERNLKIEFLQG-D--------VLEI  100 (251)
T ss_dssp             HHHHTCSSCCCEEEEETCTT-CHHHHHHHH-TTC-EEEEEESCHHHHHHHHHHHHHTTCCCEEEES-C--------GGGC
T ss_pred             HHHHhcCCCCCEEEEeCCCC-Cccchhhcc-cce-EEEEEeeccccccccccccccccccchheeh-h--------hhhc
Confidence            34555677888999999985 788887777 577 899999999888877652    322 12211 1        1222


Q ss_pred             cC-CCccEEEEcccC---------hHhHHHHHHHhhCCCceEEE
Q 018529          236 TN-GGVDRSVECTGN---------IDNMISAFECVHDGWGVAVL  269 (354)
Q Consensus       236 ~~-~~~dvv~d~~g~---------~~~~~~~~~~l~~~~g~~v~  269 (354)
                      .. +.||+|+...+.         ...+..+.++|+++ |++++
T Consensus       101 ~~~~~fD~I~~~~~~~~~~~~~~~~~~L~~~~~~Lkpg-G~lii  143 (251)
T d1wzna1         101 AFKNEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPG-GVFIT  143 (251)
T ss_dssp             CCCSCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEE-EEEEE
T ss_pred             ccccccchHhhhhhhhhcCChHHHHHHHHHHHHHcCCC-cEEEE
Confidence            22 379999875432         13577888999997 98875

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=96.31  E-value=0.0078  Score=44.79  Aligned_cols=101  Identities=22%  Similarity=0.289  Sum_probs=72.5

Q ss_pred             hhhhhhcC-CCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcC
Q 018529          159 GATLNVAK-PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTN  237 (354)
Q Consensus       159 ~~l~~~~~-~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~  237 (354)
                      .++.+..+ +-.|++++|.|=|-+|.-.++-++.+|+ +|++++.++-+.-.+.--|.. +..       ..+.+     
T Consensus        11 d~i~r~t~~~laGk~vvV~GYG~vGrG~A~~~rg~Ga-~V~V~E~DPi~alqA~mdGf~-v~~-------~~~a~-----   76 (163)
T d1v8ba1          11 DGLMRATDFLISGKIVVICGYGDVGKGCASSMKGLGA-RVYITEIDPICAIQAVMEGFN-VVT-------LDEIV-----   76 (163)
T ss_dssp             HHHHHHHCCCCTTSEEEEECCSHHHHHHHHHHHHHTC-EEEEECSCHHHHHHHHTTTCE-ECC-------HHHHT-----
T ss_pred             HHHHHHhCceecCCEEEEecccccchhHHHHHHhCCC-EEEEEecCchhhHHHHhcCCc-cCc-------hhHcc-----
Confidence            33444333 5789999999999999999999999999 999999998665444433542 221       22222     


Q ss_pred             CCccEEEEcccChHh-HHHHHHHhhCCCceEEEEcCCC
Q 018529          238 GGVDRSVECTGNIDN-MISAFECVHDGWGVAVLVGVPS  274 (354)
Q Consensus       238 ~~~dvv~d~~g~~~~-~~~~~~~l~~~~g~~v~~g~~~  274 (354)
                      +..|+++.++|..+. -..-++.|+++ ..++..|...
T Consensus        77 ~~aDi~vTaTGn~~vI~~~h~~~MKdg-aIl~N~GHfd  113 (163)
T d1v8ba1          77 DKGDFFITCTGNVDVIKLEHLLKMKNN-AVVGNIGHFD  113 (163)
T ss_dssp             TTCSEEEECCSSSSSBCHHHHTTCCTT-CEEEECSSTT
T ss_pred             ccCcEEEEcCCCCccccHHHHHHhhCC-eEEEeccccc
Confidence            247999999998664 45668889886 7777776543

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.26  E-value=0.0026  Score=51.46  Aligned_cols=75  Identities=24%  Similarity=0.210  Sum_probs=51.1

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCC--hhHHHHHHHHcCCCccEEEE
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHD--RPIQEVIAEMTNGGVDRSVE  245 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~--~~~~~~i~~~~~~~~dvv~d  245 (354)
                      +|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+..    ...|..+.+  +.+.+.+.+.. ++.|++++
T Consensus         6 ~gK~~lITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~~~----~~~Dv~~~~~v~~~~~~~~~~~-g~iDiLVn   79 (237)
T d1uzma1           6 VSRSVLVTGGNRGIGLAIAQRLAADGH-KVAVTHRGSGAPKGLFG----VEVDVTDSDAVDRAFTAVEEHQ-GPVEVLVS   79 (237)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSSCCCTTSEE----EECCTTCHHHHHHHHHHHHHHH-SSCSEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCcchhcCceE----EEEecCCHHHHHHHHHHHHHhc-CCceEEEe
Confidence            6789999987 8999999999999999 99999998766543211    223333322  12333333322 47999999


Q ss_pred             cccC
Q 018529          246 CTGN  249 (354)
Q Consensus       246 ~~g~  249 (354)
                      ++|.
T Consensus        80 nAG~   83 (237)
T d1uzma1          80 NAGL   83 (237)
T ss_dssp             ECSC
T ss_pred             eecc
Confidence            8875

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=96.22  E-value=0.017  Score=46.43  Aligned_cols=77  Identities=21%  Similarity=0.231  Sum_probs=49.3

Q ss_pred             eEEEEcC-ChhHHHHHHHHHHcCCc------EEEEEcCChhhHHHH----HhcCCceE-E--cCCCCC--hhHHHHHHHH
Q 018529          172 SVAVFGL-GAVGLAAAEGARIAGAS------RIIGVDRSSKRFEEA----KKFGVTDF-V--NTSEHD--RPIQEVIAEM  235 (354)
Q Consensus       172 ~vlI~G~-g~~G~~a~~~a~~~g~~------~vi~v~~~~~~~~~~----~~lg~~~v-~--~~~~~~--~~~~~~i~~~  235 (354)
                      .|||+|+ +++|.+.+..+...|++      .|+.+++++++.+.+    ++.|.... +  |..+.+  +.+.+.+.+.
T Consensus         3 VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~   82 (240)
T d2bd0a1           3 ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVER   82 (240)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             EEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            4688887 99999988888788873      388888998887654    33454322 2  333321  1223333332


Q ss_pred             cCCCccEEEEcccC
Q 018529          236 TNGGVDRSVECTGN  249 (354)
Q Consensus       236 ~~~~~dvv~d~~g~  249 (354)
                      . |++|++++++|.
T Consensus        83 ~-g~iDilvnnAg~   95 (240)
T d2bd0a1          83 Y-GHIDCLVNNAGV   95 (240)
T ss_dssp             T-SCCSEEEECCCC
T ss_pred             c-CCcceeeccccc
Confidence            2 479999999885

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=96.19  E-value=0.0075  Score=47.80  Aligned_cols=94  Identities=13%  Similarity=0.127  Sum_probs=62.4

Q ss_pred             CCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCce-EEcCCCCChhHHHHHHHHcCCCc
Q 018529          166 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD-FVNTSEHDRPIQEVIAEMTNGGV  240 (354)
Q Consensus       166 ~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~~-v~~~~~~~~~~~~~i~~~~~~~~  240 (354)
                      -++++++||=+|||. |..+..+++. |. +|+++|.+++..+.+++    .+... .+..+..+  +     .+.++.+
T Consensus        34 ~l~~~~~ILDiGcG~-G~~~~~la~~-~~-~v~giD~S~~~i~~ak~~~~~~~~~~~~~~~d~~~--l-----~~~~~~f  103 (226)
T d1ve3a1          34 YMKKRGKVLDLACGV-GGFSFLLEDY-GF-EVVGVDISEDMIRKAREYAKSRESNVEFIVGDARK--L-----SFEDKTF  103 (226)
T ss_dssp             SCCSCCEEEEETCTT-SHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTS--C-----CSCTTCE
T ss_pred             hcCCCCEEEEECCCc-chhhhhHhhh-hc-ccccccccccchhhhhhhhcccccccccccccccc--c-----cccCcCc
Confidence            367889999999975 7788888874 77 89999999988877754    33321 22211111  0     0122479


Q ss_pred             cEEEEcccC--------hHhHHHHHHHhhCCCceEEEE
Q 018529          241 DRSVECTGN--------IDNMISAFECVHDGWGVAVLV  270 (354)
Q Consensus       241 dvv~d~~g~--------~~~~~~~~~~l~~~~g~~v~~  270 (354)
                      |+|+....-        ...++.+.+.|+++ |++++.
T Consensus       104 D~I~~~~~l~~~~~~d~~~~l~~i~~~Lkpg-G~lii~  140 (226)
T d1ve3a1         104 DYVIFIDSIVHFEPLELNQVFKEVRRVLKPS-GKFIMY  140 (226)
T ss_dssp             EEEEEESCGGGCCHHHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             eEEEEecchhhCChhHHHHHHHHHHHHcCcC-cEEEEE
Confidence            999864321        12577888999997 998754

>d1u2za_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.16  E-value=0.011  Score=51.33  Aligned_cols=105  Identities=11%  Similarity=0.109  Sum_probs=68.7

Q ss_pred             hhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhc---------------CCceE-EcCCCC
Q 018529          161 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF---------------GVTDF-VNTSEH  224 (354)
Q Consensus       161 l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~l---------------g~~~v-~~~~~~  224 (354)
                      +++..++++|+++|=+|||. |..+.++|+..|..+|++++.++...+.+++.               +.... +.....
T Consensus       208 Il~~l~Lkpgd~fLDLGCG~-G~~vl~aA~~~g~~~v~GIDiS~~~i~~Ak~~~~e~~~~~~~~g~~~~~~~~~~~~~f~  286 (406)
T d1u2za_         208 VYQQCQLKKGDTFMDLGSGV-GNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFV  286 (406)
T ss_dssp             HHHHTTCCTTCEEEEESCTT-SHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCST
T ss_pred             HHHHhCCCCCCEEEeCCCCC-cHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHHhhhhhhhccccccceeeeeechh
Confidence            46778999999999899984 99999999999977999999999877776431               11111 111111


Q ss_pred             ChhHHHHHHHHcCCCccEEEEcc--cC---hHhHHHHHHHhhCCCceEEEEc
Q 018529          225 DRPIQEVIAEMTNGGVDRSVECT--GN---IDNMISAFECVHDGWGVAVLVG  271 (354)
Q Consensus       225 ~~~~~~~i~~~~~~~~dvv~d~~--g~---~~~~~~~~~~l~~~~g~~v~~g  271 (354)
                      +.+.....  +  ..+|+|+...  -.   ...+..+++.|+++ |+++...
T Consensus       287 ~~~~~d~~--~--~~adVV~inn~~f~~~l~~~L~ei~r~LKPG-GrIVs~~  333 (406)
T d1u2za_         287 DNNRVAEL--I--PQCDVILVNNFLFDEDLNKKVEKILQTAKVG-CKIISLK  333 (406)
T ss_dssp             TCHHHHHH--G--GGCSEEEECCTTCCHHHHHHHHHHHTTCCTT-CEEEESS
T ss_pred             hccccccc--c--ccceEEEEecccCchHHHHHHHHHHHhcCCC-cEEEEec
Confidence            11111111  1  1478887531  12   23466788889997 9998754

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=96.14  E-value=0.021  Score=43.22  Aligned_cols=101  Identities=19%  Similarity=0.212  Sum_probs=64.4

Q ss_pred             eEEEEcCChhHHHHHHHHHHcCCcEEEEEc-C-ChhhHHHHHhcCCceEEcCCCCChhHHH-------HHHHHcCCCccE
Q 018529          172 SVAVFGLGAVGLAAAEGARIAGASRIIGVD-R-SSKRFEEAKKFGVTDFVNTSEHDRPIQE-------VIAEMTNGGVDR  242 (354)
Q Consensus       172 ~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~-~-~~~~~~~~~~lg~~~v~~~~~~~~~~~~-------~i~~~~~~~~dv  242 (354)
                      +|.|.|.|-+|...+..+....--.++++. . ..+....+.+++.+......+....+.+       .+.++. .++|+
T Consensus         4 rIaINGfGRIGR~v~Ral~~~~dieiVaINd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~vDv   82 (172)
T d2czca2           4 KVGVNGYGTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLNDLL-EKVDI   82 (172)
T ss_dssp             EEEEECCSHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHHHH-TTCSE
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCceEEEEecCCChHHHHHhhhcCceeecccccceeeecccCccccchhhhhh-ccCCE
Confidence            688999999999888877654322566663 2 3344556667776544322221111111       011111 26999


Q ss_pred             EEEcccChHhHHHHHHHhhCCCceEEEEcCCC
Q 018529          243 SVECTGNIDNMISAFECVHDGWGVAVLVGVPS  274 (354)
Q Consensus       243 v~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~  274 (354)
                      |+||+|.....+.+-..+..+ -+.|+++.+.
T Consensus        83 ViEcTG~f~~~~~~~~hl~~G-~k~Vi~s~~~  113 (172)
T d2czca2          83 IVDATPGGIGAKNKPLYEKAG-VKAIFQGGEK  113 (172)
T ss_dssp             EEECCSTTHHHHHHHHHHHHT-CEEEECTTSC
T ss_pred             EEECCCCCCCHHHHHHHHHcC-CCEEEECCCC
Confidence            999999977788888899996 8888887754

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.14  E-value=0.0081  Score=48.03  Aligned_cols=105  Identities=15%  Similarity=0.038  Sum_probs=66.5

Q ss_pred             hhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCC-ce------------EEcCCCCC----
Q 018529          163 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV-TD------------FVNTSEHD----  225 (354)
Q Consensus       163 ~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~-~~------------v~~~~~~~----  225 (354)
                      +...+.++.+||..|||. |..+..+|+ .|+ .|+++|.+++..+.+++... ..            ........    
T Consensus        39 ~~l~~~~~~rvLd~GCG~-G~~a~~LA~-~G~-~V~gvD~S~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  115 (229)
T d2bzga1          39 TFLKGKSGLRVFFPLCGK-AVEMKWFAD-RGH-SVVGVEISELGIQEFFTEQNLSYSEEPITEIPGTKVFKSSSGNISLY  115 (229)
T ss_dssp             HHHTTCCSCEEEETTCTT-CTHHHHHHH-TTC-EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEE
T ss_pred             HhcCCCCCCEEEEeCCCC-cHHHHHHHh-CCC-cEEEEeCCHHHHHHHHHHhhccccccchhcccccceeeecCCcEEEE
Confidence            445678999999999986 788888886 588 99999999999888765321 11            00000000    


Q ss_pred             -hhHHHHHHHHcCCCccEEEEcccC--------hHhHHHHHHHhhCCCceEEEEcC
Q 018529          226 -RPIQEVIAEMTNGGVDRSVECTGN--------IDNMISAFECVHDGWGVAVLVGV  272 (354)
Q Consensus       226 -~~~~~~i~~~~~~~~dvv~d~~g~--------~~~~~~~~~~l~~~~g~~v~~g~  272 (354)
                       .++.+ +.....+.+|+|+++.--        ...+..+.++|+++ |++++...
T Consensus       116 ~~d~~~-l~~~~~~~fd~i~~~~~l~~~~~~~r~~~~~~~~~~Lkpg-G~~~l~~~  169 (229)
T d2bzga1         116 CCSIFD-LPRTNIGKFDMIWDRGALVAINPGDRKCYADTMFSLLGKK-FQYLLCVL  169 (229)
T ss_dssp             ESCGGG-GGGSCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEE-EEEEEEEE
T ss_pred             Ecchhh-ccccccCceeEEEEEEEEEeccchhhHHHHHHHHhhcCCc-ceEEEEEc
Confidence             00100 111112368999986421        24567888999997 98766543

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=96.13  E-value=0.0059  Score=51.73  Aligned_cols=103  Identities=24%  Similarity=0.264  Sum_probs=65.3

Q ss_pred             CCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCc-eEEcCCCCChhHHHHHHHHc-CC-
Q 018529          166 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT-DFVNTSEHDRPIQEVIAEMT-NG-  238 (354)
Q Consensus       166 ~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~-~v~~~~~~~~~~~~~i~~~~-~~-  238 (354)
                      .+++|++||=.++|. |..++.+|+. |+..|++++.+++..+.+++    .|.. .+. ....+  ..+.+..+. .+ 
T Consensus       142 ~~~~g~~VLDl~~g~-G~~si~~a~~-ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~-~~~~d--~~~~~~~~~~~~~  216 (324)
T d2as0a2         142 WVQPGDRVLDVFTYT-GGFAIHAAIA-GADEVIGIDKSPRAIETAKENAKLNGVEDRMK-FIVGS--AFEEMEKLQKKGE  216 (324)
T ss_dssp             GCCTTCEEEETTCTT-THHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTCGGGEE-EEESC--HHHHHHHHHHTTC
T ss_pred             hcCCCCeeecccCcc-cchhhhhhhc-CCcEEEeecCCHHHHHHHHHHHHHcCCCccce-eeech--hhhhhHHHHhccC
Confidence            467899998876632 4444455544 77799999999999888755    4553 221 22222  444444332 23 


Q ss_pred             CccEEEEcccC---------------hHhHHHHHHHhhCCCceEEEEcCCC
Q 018529          239 GVDRSVECTGN---------------IDNMISAFECVHDGWGVAVLVGVPS  274 (354)
Q Consensus       239 ~~dvv~d~~g~---------------~~~~~~~~~~l~~~~g~~v~~g~~~  274 (354)
                      .||+|+--.+.               ..++..+.++|+++ |.++++....
T Consensus       217 ~fD~Vi~DpP~~~~~~~~~~~~~~~y~~l~~~a~~ll~pG-G~lv~~s~s~  266 (324)
T d2as0a2         217 KFDIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDG-GILVTCSCSQ  266 (324)
T ss_dssp             CEEEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEE-EEEEEEECCT
T ss_pred             CCCchhcCCccccCCHHHHHHHHHHHHHHHHHHHHHcCCC-cEEEEEeCCc
Confidence            89999853221               13567788899997 9998886543

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=96.10  E-value=0.02  Score=44.47  Aligned_cols=88  Identities=18%  Similarity=0.129  Sum_probs=60.6

Q ss_pred             CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEccc
Q 018529          169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  248 (354)
Q Consensus       169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g  248 (354)
                      .|.+|.|+|.|.+|...+++++.+|. +|++.++........  .+..    .  .+  +.+.+++     .|+|+.+++
T Consensus        42 ~gk~vgIiG~G~IG~~va~~l~~fg~-~V~~~d~~~~~~~~~--~~~~----~--~~--l~~~l~~-----sDii~~~~p  105 (197)
T d1j4aa1          42 RDQVVGVVGTGHIGQVFMQIMEGFGA-KVITYDIFRNPELEK--KGYY----V--DS--LDDLYKQ-----ADVISLHVP  105 (197)
T ss_dssp             GGSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCHHHHH--TTCB----C--SC--HHHHHHH-----CSEEEECSC
T ss_pred             cCCeEEEecccccchhHHHhHhhhcc-cccccCccccccccc--ceee----e--cc--ccccccc-----cccccccCC
Confidence            58899999999999999999999999 999998665433222  1211    1  11  4444443     699988765


Q ss_pred             ChH----h-HHHHHHHhhCCCceEEEEcCC
Q 018529          249 NID----N-MISAFECVHDGWGVAVLVGVP  273 (354)
Q Consensus       249 ~~~----~-~~~~~~~l~~~~g~~v~~g~~  273 (354)
                      ..+    . -...++.|+++ ..+|.++..
T Consensus       106 lt~~T~~li~~~~l~~mk~~-a~lIN~sRG  134 (197)
T d1j4aa1         106 DVPANVHMINDESIAKMKQD-VVIVNVSRG  134 (197)
T ss_dssp             CCGGGTTCBSHHHHHHSCTT-EEEEECSCG
T ss_pred             ccccccccccHHHHhhhCCc-cEEEecCch
Confidence            321    2 24678888886 777777653

>d1xj5a_ c.66.1.17 (A:) Spermidine synthase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.08  E-value=0.012  Score=48.87  Aligned_cols=99  Identities=18%  Similarity=0.160  Sum_probs=68.9

Q ss_pred             CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCC--------ceE-EcCCCCChhHHHHHHHHcCC
Q 018529          168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV--------TDF-VNTSEHDRPIQEVIAEMTNG  238 (354)
Q Consensus       168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~--------~~v-~~~~~~~~~~~~~i~~~~~~  238 (354)
                      ...++|||+|+|. |..+-.+++..+..+|.+++.+++-.+.++++-.        .++ +...    +..+.+++...+
T Consensus        79 ~~pk~VLiiGgG~-G~~~r~~l~~~~~~~i~~VEiD~~Vi~~~~~~f~~~~~~~~~~r~~i~~~----Da~~~l~~~~~~  153 (290)
T d1xj5a_          79 PNPKKVLVIGGGD-GGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIG----DGVAFLKNAAEG  153 (290)
T ss_dssp             SCCCEEEEETCSS-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEES----CHHHHHHTSCTT
T ss_pred             CCCcceEEecCCc-hHHHHHHHhcccceeeEEecCCHHHHHHHHHhchhhhccccCCCcEEEEc----cHHHHHhhcccc
Confidence            4457999998754 5556677887777799999999999888887431        111 1111    255667665555


Q ss_pred             CccEEE-Eccc---------ChHhHHHHHHHhhCCCceEEEEcC
Q 018529          239 GVDRSV-ECTG---------NIDNMISAFECVHDGWGVAVLVGV  272 (354)
Q Consensus       239 ~~dvv~-d~~g---------~~~~~~~~~~~l~~~~g~~v~~g~  272 (354)
                      .+|+|+ |+..         +.+.++.+.++|+++ |.++.-..
T Consensus       154 ~yDvIi~D~~dp~~~~~~L~t~eF~~~~~~~L~~~-Gi~v~q~~  196 (290)
T d1xj5a_         154 SYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPG-GVVCTQAE  196 (290)
T ss_dssp             CEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEE-EEEEEECC
T ss_pred             CccEEEEcCCCCCCcchhhCCHHHHHHHHHhcCCC-cEEEEecC
Confidence            899886 4432         246788999999997 99887653

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.02  E-value=0.0043  Score=52.29  Aligned_cols=45  Identities=27%  Similarity=0.409  Sum_probs=34.0

Q ss_pred             hhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhH
Q 018529          161 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRF  207 (354)
Q Consensus       161 l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~  207 (354)
                      +.+...+.+|++||-+|+| .|.+++.+|+ .|+++|++++.++.-.
T Consensus        27 i~~~~~~~~~~~VLDiGcG-~G~lsl~aa~-~Ga~~V~aid~s~~~~   71 (311)
T d2fyta1          27 IYQNPHIFKDKVVLDVGCG-TGILSMFAAK-AGAKKVLGVDQSEILY   71 (311)
T ss_dssp             HHHCGGGTTTCEEEEETCT-TSHHHHHHHH-TTCSEEEEEESSTHHH
T ss_pred             HHhccccCCcCEEEEECCC-CCHHHHHHHH-cCCCEEEEEeCHHHHH
Confidence            3344466789999999987 5777777666 4777999999888543

>d1susa1 c.66.1.1 (A:21-247) Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Caffeoyl-CoA O-methyltransferase
species: Alfalfa (Medicago sativa) [TaxId: 3879]

Probab=95.96  E-value=0.0093  Score=47.57  Aligned_cols=105  Identities=18%  Similarity=0.182  Sum_probs=70.5

Q ss_pred             cCCCCCCeEEEEcCChhHHHHHHHHHHcCC-cEEEEEcCChhhHHHHHh----cCCceEEcCCCCChhHHHHHHHH----
Q 018529          165 AKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEM----  235 (354)
Q Consensus       165 ~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~-~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~~----  235 (354)
                      .+....++||=+|.+ +|+.++.+|+.+.. .+++.++.+++..+.+++    .|...-+.....+  ..+.+.++    
T Consensus        55 ~~~~~~k~iLEiGT~-~GyStl~la~al~~~g~v~tie~~~~~~~~A~~~~~~~g~~~~i~~~~g~--a~~~L~~l~~~~  131 (227)
T d1susa1          55 LKLINAKNTMEIGVY-TGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGP--ALPVLDEMIKDE  131 (227)
T ss_dssp             HHHHTCCEEEEECCG-GGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESC--HHHHHHHHHHCG
T ss_pred             HHhcCCCcEEEecch-hhhhHHHHHhhCCCCcEEEEEeccchhHHHHHHHHHHhccccceeeeehH--HHHHHHHHHhcc
Confidence            344556889999875 58888999988742 299999999998877765    4664322222222  44445444    


Q ss_pred             -cCCCccEEEE-ccc--ChHhHHHHHHHhhCCCceEEEEcCC
Q 018529          236 -TNGGVDRSVE-CTG--NIDNMISAFECVHDGWGVAVLVGVP  273 (354)
Q Consensus       236 -~~~~~dvv~d-~~g--~~~~~~~~~~~l~~~~g~~v~~g~~  273 (354)
                       ..+.||.||- +--  ....++.+++.|+++ |.++.=...
T Consensus       132 ~~~~~fD~iFiDa~k~~y~~~~e~~~~ll~~g-Giii~DNvl  172 (227)
T d1susa1         132 KNHGSYDFIFVDADKDNYLNYHKRLIDLVKVG-GVIGYDNTL  172 (227)
T ss_dssp             GGTTCBSEEEECSCSTTHHHHHHHHHHHBCTT-CCEEEETTT
T ss_pred             ccCCceeEEEeccchhhhHHHHHHHHhhcCCC-cEEEEccCC
Confidence             2347999974 332  235688999999997 887765443

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=95.96  E-value=0.044  Score=40.25  Aligned_cols=99  Identities=14%  Similarity=0.216  Sum_probs=65.1

Q ss_pred             CeEEEEcC-ChhHHHHHHHHHHc--CCcEEEEEcCChhh---HHHHHhcCCceEEcCCCCCh-hH--------------H
Q 018529          171 SSVAVFGL-GAVGLAAAEGARIA--GASRIIGVDRSSKR---FEEAKKFGVTDFVNTSEHDR-PI--------------Q  229 (354)
Q Consensus       171 ~~vlI~G~-g~~G~~a~~~a~~~--g~~~vi~v~~~~~~---~~~~~~lg~~~v~~~~~~~~-~~--------------~  229 (354)
                      ++|.|+|+ |.+|..++.+.+..  .. +|+++.....-   .+.+++|.+..+...++... .+              .
T Consensus         3 K~I~IlGsTGSIG~~tL~Vi~~~~d~f-~v~~lsa~~N~~~L~~q~~ef~Pk~v~i~d~~~~~~l~~~~~~~~~~v~~g~   81 (150)
T d1r0ka2           3 RTVTVLGATGSIGHSTLDLIERNLDRY-QVIALTANRNVKDLADAAKRTNAKRAVIADPSLYNDLKEALAGSSVEAAAGA   81 (150)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTGGGE-EEEEEEESSCHHHHHHHHHHTTCSEEEESCGGGHHHHHHHTTTCSSEEEESH
T ss_pred             cEEEEECCCcHHHHHHHHHHHcCCCCc-EEEEEEeCCCHHHHHHHHHhhccccceeccHHHHHHHHHHhhhcccccccCc
Confidence            78999998 99999999999976  34 77777665543   33456788887765544321 01              1


Q ss_pred             HHHHHHcCCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcC
Q 018529          230 EVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGV  272 (354)
Q Consensus       230 ~~i~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~  272 (354)
                      +.+.+.....+|+|+.++.+...+.-.+.+++.+ -+ +.++.
T Consensus        82 ~~l~~~~~~~~D~vv~Ai~G~~GL~~tl~ai~~g-k~-iaLAN  122 (150)
T d1r0ka2          82 DALVEAAMMGADWTMAAIIGCAGLKATLAAIRKG-KT-VALAN  122 (150)
T ss_dssp             HHHHHHHTSCCSEEEECCCSGGGHHHHHHHHHTT-SE-EEECC
T ss_pred             cchheecccccceeeeecCchhHHHHHHHHHhcC-CE-EEEec
Confidence            1122222236888888877768888888888884 44 44443

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=95.91  E-value=0.028  Score=45.58  Aligned_cols=81  Identities=17%  Similarity=0.229  Sum_probs=52.9

Q ss_pred             CCCCeEEEEcC-C--hhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCceEEcCCCCC-hhHHHHHHHHcC--
Q 018529          168 ERGSSVAVFGL-G--AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHD-RPIQEVIAEMTN--  237 (354)
Q Consensus       168 ~~~~~vlI~G~-g--~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~-~~~~~~i~~~~~--  237 (354)
                      -+|+++||+|+ |  ++|.+.+..+...|+ +|+.++++++..+.+.+    .+....+.....+ .+..+.+.+...  
T Consensus         3 L~gK~~lITGass~~GIG~aiA~~l~~~G~-~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (258)
T d1qsga_           3 LSGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVW   81 (258)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTC
T ss_pred             CCCCEEEEECCCCchhHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhcc
Confidence            46899999987 6  688888888889999 88888888776655433    4444444333333 222333333322  


Q ss_pred             CCccEEEEcccC
Q 018529          238 GGVDRSVECTGN  249 (354)
Q Consensus       238 ~~~dvv~d~~g~  249 (354)
                      +..|+.+++++.
T Consensus        82 ~~~d~~v~~a~~   93 (258)
T d1qsga_          82 PKFDGFVHSIGF   93 (258)
T ss_dssp             SSEEEEEECCCC
T ss_pred             cccceEEEeecc
Confidence            378999987654

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.88  E-value=0.024  Score=42.51  Aligned_cols=73  Identities=16%  Similarity=0.191  Sum_probs=51.8

Q ss_pred             CeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcccCh
Q 018529          171 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI  250 (354)
Q Consensus       171 ~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~~  250 (354)
                      .+|.++|.|.+|...+.-+...|. .|.+.++++++.+.+.+.+....-   +    ..+.+     ...|+++.|+...
T Consensus         2 ~kIg~IGlG~MG~~iA~~L~~~g~-~v~~~d~~~~~~~~~~~~~~~~~~---~----~~e~~-----~~~diii~~v~~~   68 (162)
T d3cuma2           2 KQIAFIGLGHMGAPMATNLLKAGY-LLNVFDLVQSAVDGLVAAGASAAR---S----ARDAV-----QGADVVISMLPAS   68 (162)
T ss_dssp             CEEEEECCSTTHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHTTCEECS---S----HHHHH-----TSCSEEEECCSCH
T ss_pred             CEEEEEEEHHHHHHHHHHHHHCCC-eEEEEECchhhhhhhhhhhccccc---h----hhhhc-----cccCeeeecccch
Confidence            368899999999987777777898 999999999999998888764221   1    22222     1367777777765


Q ss_pred             HhHHHH
Q 018529          251 DNMISA  256 (354)
Q Consensus       251 ~~~~~~  256 (354)
                      ...+..
T Consensus        69 ~~~~~v   74 (162)
T d3cuma2          69 QHVEGL   74 (162)
T ss_dssp             HHHHHH
T ss_pred             hhHHHH
Confidence            544433

>d2frna1 c.66.1.47 (A:19-278) Hypothetical protein PH0793 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Met-10+ protein-like
domain: Hypothetical protein PH0793
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=95.75  E-value=0.0053  Score=50.23  Aligned_cols=95  Identities=15%  Similarity=0.154  Sum_probs=60.9

Q ss_pred             CCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCce-EEcCCCCChhHHHHHHHHcCC-C
Q 018529          166 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD-FVNTSEHDRPIQEVIAEMTNG-G  239 (354)
Q Consensus       166 ~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~~-v~~~~~~~~~~~~~i~~~~~~-~  239 (354)
                      .+++|++||-.||| +|..++.+|+.-++ +|++++.+++..+++++    .|... +.....+.       .++... .
T Consensus       104 ~~~~g~~VlD~~aG-~G~~~l~~a~~~~~-~V~avd~n~~a~~~~~~N~~~n~l~~~v~~~~~D~-------~~~~~~~~  174 (260)
T d2frna1         104 VAKPDELVVDMFAG-IGHLSLPIAVYGKA-KVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDN-------RDFPGENI  174 (260)
T ss_dssp             HCCTTCEEEETTCT-TTTTHHHHHHHTCC-EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCT-------TTCCCCSC
T ss_pred             hcCCccEEEECcce-EcHHHHHHHHhCCc-EEEEecCCHHHHHHHHHHHHHhCCCceEEEEEcch-------HHhccCCC
Confidence            46899999998764 35556667776444 99999999999888865    34422 32222211       112223 6


Q ss_pred             ccEEEE-cc-cChHhHHHHHHHhhCCCceEEEE
Q 018529          240 VDRSVE-CT-GNIDNMISAFECVHDGWGVAVLV  270 (354)
Q Consensus       240 ~dvv~d-~~-g~~~~~~~~~~~l~~~~g~~v~~  270 (354)
                      +|.|+- .. .+.+.+..+++.++++ |.+.+.
T Consensus       175 ~D~Ii~~~p~~~~~~l~~a~~~l~~g-G~lh~~  206 (260)
T d2frna1         175 ADRILMGYVVRTHEFIPKALSIAKDG-AIIHYH  206 (260)
T ss_dssp             EEEEEECCCSSGGGGHHHHHHHEEEE-EEEEEE
T ss_pred             CCEEEECCCCchHHHHHHHHhhcCCC-CEEEEE
Confidence            896653 32 3456788899999996 876543

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=95.73  E-value=0.015  Score=45.24  Aligned_cols=93  Identities=14%  Similarity=0.229  Sum_probs=60.6

Q ss_pred             CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCceE-EcCCCCChhHHHHHHHHcCCCccEE
Q 018529          169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDF-VNTSEHDRPIQEVIAEMTNGGVDRS  243 (354)
Q Consensus       169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~~v-~~~~~~~~~~~~~i~~~~~~~~dvv  243 (354)
                      ++.+||-+||| .|..+..+++ .|. +|++++.+++..+.+++    .+.+.+ +...+... +      ...+.||+|
T Consensus        30 ~~grvLDiGcG-~G~~~~~la~-~g~-~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d~~~-~------~~~~~fD~I   99 (198)
T d2i6ga1          30 APGRTLDLGCG-NGRNSLYLAA-NGY-DVTAWDKNPASMANLERIKAAEGLDNLQTDLVDLNT-L------TFDGEYDFI   99 (198)
T ss_dssp             CSCEEEEETCT-TSHHHHHHHH-TTC-EEEEEESCHHHHHHHHHHHHHTTCTTEEEEECCTTT-C------CCCCCEEEE
T ss_pred             CCCcEEEECCC-CCHHHHHHHH-Hhh-hhccccCcHHHHHHHHHHhhhccccchhhhheeccc-c------cccccccEE
Confidence            34489999997 6888888876 488 99999999988877643    455432 11111100 0      012379999


Q ss_pred             EEccc-----C---hHhHHHHHHHhhCCCceEEEEcC
Q 018529          244 VECTG-----N---IDNMISAFECVHDGWGVAVLVGV  272 (354)
Q Consensus       244 ~d~~g-----~---~~~~~~~~~~l~~~~g~~v~~g~  272 (354)
                      +...-     .   ...++.+.++|+++ |++++...
T Consensus       100 ~~~~~~~~~~~~~~~~~l~~~~~~L~pg-G~~~~~~~  135 (198)
T d2i6ga1         100 LSTVVMMFLEAQTIPGLIANMQRCTKPG-GYNLIVAA  135 (198)
T ss_dssp             EEESCGGGSCTTHHHHHHHHHHHTEEEE-EEEEEEEE
T ss_pred             EEeeeeecCCHHHHHHHHHHHHHHcCCC-cEEEEEEe
Confidence            86321     1   13677788889997 99887643

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=95.62  E-value=0.029  Score=41.50  Aligned_cols=86  Identities=15%  Similarity=0.176  Sum_probs=60.8

Q ss_pred             eEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-HhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcccCh
Q 018529          172 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI  250 (354)
Q Consensus       172 ~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~~  250 (354)
                      +|.++|+|.+|.+.+.-....|. .+++.+++.++.+.+ +++|....    . +  ..+.++     ..|+||-|+. |
T Consensus         2 kIg~IG~G~mG~al~~~l~~~~~-~i~v~~r~~~~~~~l~~~~g~~~~----~-~--~~~~~~-----~~dvIilavk-p   67 (152)
T d2ahra2           2 KIGIIGVGKMASAIIKGLKQTPH-ELIISGSSLERSKEIAEQLALPYA----M-S--HQDLID-----QVDLVILGIK-P   67 (152)
T ss_dssp             EEEEECCSHHHHHHHHHHTTSSC-EEEEECSSHHHHHHHHHHHTCCBC----S-S--HHHHHH-----TCSEEEECSC-G
T ss_pred             EEEEEeccHHHHHHHHHHHhCCC-eEEEEcChHHhHHhhccccceeee----c-h--hhhhhh-----ccceeeeecc-h
Confidence            47789999999987775566676 899999998887765 56776432    1 1  333332     4799999985 4


Q ss_pred             HhHHHHHHHhhCCCceEEEEcC
Q 018529          251 DNMISAFECVHDGWGVAVLVGV  272 (354)
Q Consensus       251 ~~~~~~~~~l~~~~g~~v~~g~  272 (354)
                      +.+...++.+.++ ..++.+..
T Consensus        68 ~~~~~vl~~l~~~-~~iis~~a   88 (152)
T d2ahra2          68 QLFETVLKPLHFK-QPIISMAA   88 (152)
T ss_dssp             GGHHHHHTTSCCC-SCEEECCT
T ss_pred             HhHHHHhhhcccc-eeEecccc
Confidence            6778888888876 66665543

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=95.58  E-value=0.0024  Score=48.39  Aligned_cols=90  Identities=13%  Similarity=0.137  Sum_probs=55.2

Q ss_pred             eEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCce--EE-cCCCCChhHHHHHHHHcCCCccEEEEccc
Q 018529          172 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD--FV-NTSEHDRPIQEVIAEMTNGGVDRSVECTG  248 (354)
Q Consensus       172 ~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~--v~-~~~~~~~~~~~~i~~~~~~~~dvv~d~~g  248 (354)
                      +|+|+|+|.+|.+....+...|. .|..+++++++.+.....+.+.  .. .....   ..+.+     +.+|++|-++.
T Consensus         2 kI~IiGaG~iG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-----~~~D~iii~vk   72 (167)
T d1ks9a2           2 KITVLGCGALGQLWLTALCKQGH-EVQGWLRVPQPYCSVNLVETDGSIFNESLTAN---DPDFL-----ATSDLLLVTLK   72 (167)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCSEEEEEEECTTSCEEEEEEEES---CHHHH-----HTCSEEEECSC
T ss_pred             EEEEECcCHHHHHHHHHHHHCCC-ceEEEEcCHHHhhhhccccCCccccccccccc---hhhhh-----cccceEEEeec
Confidence            58999999999998888888898 9999999887555443333211  10 00011   11112     25899999987


Q ss_pred             ChHhHHHHHH----HhhCCCceEEEEcC
Q 018529          249 NIDNMISAFE----CVHDGWGVAVLVGV  272 (354)
Q Consensus       249 ~~~~~~~~~~----~l~~~~g~~v~~g~  272 (354)
                      ..+ .+...+    .+.++ ..++.+..
T Consensus        73 a~~-~~~~~~~l~~~~~~~-~~Iv~~qN   98 (167)
T d1ks9a2          73 AWQ-VSDAVKSLASTLPVT-TPILLIHN   98 (167)
T ss_dssp             GGG-HHHHHHHHHTTSCTT-SCEEEECS
T ss_pred             ccc-hHHHHHhhccccCcc-cEEeeccC
Confidence            743 333333    34444 56666654

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=95.56  E-value=0.015  Score=45.31  Aligned_cols=81  Identities=26%  Similarity=0.260  Sum_probs=59.5

Q ss_pred             CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcc
Q 018529          168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  247 (354)
Q Consensus       168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~  247 (354)
                      -.|.+|+|.|.|.+|..+++++...|+ +|++++.+.++.+....+|...+ ..++           +..-.+|+.+=|.
T Consensus        25 L~gk~v~IqG~G~VG~~~A~~L~~~Ga-kvvv~d~d~~~~~~~~~~g~~~~-~~~~-----------~~~~~~DI~iPcA   91 (201)
T d1c1da1          25 LDGLTVLVQGLGAVGGSLASLAAEAGA-QLLVADTDTERVAHAVALGHTAV-ALED-----------VLSTPCDVFAPCA   91 (201)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEEC-CGGG-----------GGGCCCSEEEECS
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEecchHHHHHHHHhhccccc-Cccc-----------cccccceeeeccc
Confidence            378899999999999999999999999 99999999999999888887532 1111           1222688888765


Q ss_pred             cChHhHHHHHHHhh
Q 018529          248 GNIDNMISAFECVH  261 (354)
Q Consensus       248 g~~~~~~~~~~~l~  261 (354)
                      .+...-....+.++
T Consensus        92 ~~~~I~~~~a~~i~  105 (201)
T d1c1da1          92 MGGVITTEVARTLD  105 (201)
T ss_dssp             CSCCBCHHHHHHCC
T ss_pred             ccccccHHHHhhhh
Confidence            44344444455553

>d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein HI0319 (YecO)
domain: Hypothetical protein HI0319 (YecO)
species: Haemophilus influenzae [TaxId: 727]

Probab=95.54  E-value=0.017  Score=45.85  Aligned_cols=97  Identities=22%  Similarity=0.223  Sum_probs=63.1

Q ss_pred             CCCCCCeEEEEcCChhHHHHHHHHHH---cCCcEEEEEcCChhhHHHHHh----cCCceEEcCCCCChhHHHHHHHHcCC
Q 018529          166 KPERGSSVAVFGLGAVGLAAAEGARI---AGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTNG  238 (354)
Q Consensus       166 ~~~~~~~vlI~G~g~~G~~a~~~a~~---~g~~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~~~~~  238 (354)
                      .++++.+||=+|||. |..+..+++.   .++ +|+++|.+++-.+.+++    .+....+.....+      ...+...
T Consensus        36 ~~~~~~~vLDlGCGt-G~~~~~l~~~~~~~~~-~v~giD~S~~ml~~A~~~~~~~~~~~~~~~~~~d------~~~~~~~  107 (225)
T d1im8a_          36 FVTADSNVYDLGCSR-GAATLSARRNINQPNV-KIIGIDNSQPMVERCRQHIAAYHSEIPVEILCND------IRHVEIK  107 (225)
T ss_dssp             HCCTTCEEEEESCTT-CHHHHHHHHTCCCSSC-EEEEECSCHHHHHHHHHHHHTSCCSSCEEEECSC------TTTCCCC
T ss_pred             hcCCCCEEEEeccch-hhHHHHHHHhhcCCCC-ceEEeCCCHHHHHHHHHHhHhhcccchhhhccch------hhccccc
Confidence            368899999999864 6677777775   466 99999999998888765    2322111111111      1112223


Q ss_pred             CccEEEEcccC--------hHhHHHHHHHhhCCCceEEEEc
Q 018529          239 GVDRSVECTGN--------IDNMISAFECVHDGWGVAVLVG  271 (354)
Q Consensus       239 ~~dvv~d~~g~--------~~~~~~~~~~l~~~~g~~v~~g  271 (354)
                      .+|+++....-        ...++.+.+.|+|+ |.+++..
T Consensus       108 ~~d~i~~~~~l~~~~~~d~~~~l~~i~~~Lkpg-G~li~~~  147 (225)
T d1im8a_         108 NASMVILNFTLQFLPPEDRIALLTKIYEGLNPN-GVLVLSE  147 (225)
T ss_dssp             SEEEEEEESCGGGSCGGGHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             cceeeEEeeeccccChhhHHHHHHHHHHhCCCC-ceeeccc
Confidence            56777654221        24688999999997 9998764

>d2b2ca1 c.66.1.17 (A:3-314) Spermidine synthase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=95.52  E-value=0.049  Score=45.29  Aligned_cols=102  Identities=13%  Similarity=0.057  Sum_probs=65.8

Q ss_pred             CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCc--eEEcCCCC---ChhHHHHHHHHcCCCccE
Q 018529          168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT--DFVNTSEH---DRPIQEVIAEMTNGGVDR  242 (354)
Q Consensus       168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~--~v~~~~~~---~~~~~~~i~~~~~~~~dv  242 (354)
                      ...++|||+|+|. |..+-.+++.....+|.+++.+++-.+.++++-..  ..++....   -.+..+.+++ +.+.+|+
T Consensus       105 ~~pk~VLIiGgG~-G~~~rellk~~~v~~v~~VEID~~Vv~~a~~~~~~~~~~~~dprv~i~i~Da~~~l~~-~~~~yDv  182 (312)
T d2b2ca1         105 PDPKRVLIIGGGD-GGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKN-HKNEFDV  182 (312)
T ss_dssp             SSCCEEEEESCTT-SHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHH-CTTCEEE
T ss_pred             CCCCeEEEeCCCc-hHHHHHHHHcCCcceEEEEcccHHHHHHHHhhchhhccccCCCCeEEEEchHHHHHHh-CCCCCCE
Confidence            4457899998765 44555777777766999999999999998874311  00110000   0125566665 4458999


Q ss_pred             EEEccc----------ChHhHHHHHHHhhCCCceEEEEcC
Q 018529          243 SVECTG----------NIDNMISAFECVHDGWGVAVLVGV  272 (354)
Q Consensus       243 v~d~~g----------~~~~~~~~~~~l~~~~g~~v~~g~  272 (354)
                      |+--..          +.+.++.+.++|+++ |.++.-+.
T Consensus       183 II~D~~dp~~~~~~L~t~eFy~~~~~~L~~~-Gi~v~q~~  221 (312)
T d2b2ca1         183 IITDSSDPVGPAESLFGQSYYELLRDALKED-GILSSQGE  221 (312)
T ss_dssp             EEECCC-------------HHHHHHHHEEEE-EEEEEECC
T ss_pred             EEEcCCCCCCcchhhhhHHHHHHHHhhcCCC-cEEEEecC
Confidence            984211          225678889999997 99887754

>d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0312
species: Thermotoga maritima [TaxId: 2336]

Probab=95.50  E-value=0.071  Score=40.53  Aligned_cols=137  Identities=17%  Similarity=0.170  Sum_probs=79.1

Q ss_pred             eEEEEcCChhHHH-HHHHHHHcCCc-EEE-EEcCChhhHHH-HHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcc
Q 018529          172 SVAVFGLGAVGLA-AAEGARIAGAS-RII-GVDRSSKRFEE-AKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  247 (354)
Q Consensus       172 ~vlI~G~g~~G~~-a~~~a~~~g~~-~vi-~v~~~~~~~~~-~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~  247 (354)
                      +|.|+|+|.+|.- .+...+..+.. .++ +.++++++.+. .++++...++.  +    +.+.+.+   ..+|+|+.++
T Consensus         5 rigiIG~G~~g~~~h~~~l~~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~~~~--~----~~ell~~---~~id~v~I~t   75 (181)
T d1zh8a1           5 RLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVFD--S----YEELLES---GLVDAVDLTL   75 (181)
T ss_dssp             EEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEES--C----HHHHHHS---SCCSEEEECC
T ss_pred             EEEEEcCCHHHHHHHHHHHHhCCCCeEEEEEEeccHhhhhhhhccccccceee--e----eeccccc---cccceeeccc
Confidence            5789999999964 56666655432 455 45677766554 45678765542  2    4443332   3689999999


Q ss_pred             cChHhHHHHHHHhhCCCceEEEEcCCCCCceeecc-hhhhc--cccEE-EEEeccCCCCCCCHHHHHHHHHccCCC
Q 018529          248 GNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTK-PINVL--NERTL-KGTFFGNYKPRTDLPSVVDMYMNKQLE  319 (354)
Q Consensus       248 g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~-~~~~~--~~~~i-~g~~~~~~~~~~~~~~~~~~~~~~~~~  319 (354)
                      ....+.+.+..++..  |.=|++.-+......... .....  ++..+ .++..........+.++.+++.+|++.
T Consensus        76 p~~~h~~~~~~al~~--gk~V~~EKPl~~~~~e~~~l~~~~~~~~~~~~v~~~~R~~~~~~~~~~~~~~i~~G~ig  149 (181)
T d1zh8a1          76 PVELNLPFIEKALRK--GVHVICEKPISTDVETGKKVVELSEKSEKTVYIAENFRENSYQKEFEDFYQVVAEGKPN  149 (181)
T ss_dssp             CGGGHHHHHHHHHHT--TCEEEEESSSSSSHHHHHHHHHHHHHCSSCEEEECGGGCCHHHHHHHHHHHHHHSCCCC
T ss_pred             ccccccccccccccc--chhhhcCCCCcCCHHHHHHHHHHHHHhCCeEEEEeeccccccCHHHHHHHHHHHCCCCc
Confidence            887778888888877  566777654321111111 11111  23333 332221111113467788889998663

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=95.49  E-value=0.028  Score=39.13  Aligned_cols=39  Identities=26%  Similarity=0.402  Sum_probs=33.0

Q ss_pred             CCCC-CeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhh
Q 018529          167 PERG-SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKR  206 (354)
Q Consensus       167 ~~~~-~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~  206 (354)
                      +.++ .+|.|+|+|.+|.+.++.|+.+|. ++++.+.+++.
T Consensus         7 ~~~~~~kigIlGgGQL~rMla~aA~~lG~-~v~v~d~~~~~   46 (111)
T d1kjqa2           7 LRPAATRVMLLGSGELGKEVAIECQRLGV-EVIAVDRYADA   46 (111)
T ss_dssp             TSTTCCEEEEESCSHHHHHHHHHHHTTTC-EEEEEESSTTC
T ss_pred             CCCCCCEEEEEeCCHHHHHHHHHHHHCCC-EEEEEcCCCCC
Confidence            3444 469999999999999999999999 89999877654

>d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Glycine N-methyltransferase
domain: Glycine N-methyltransferase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=95.49  E-value=0.0037  Score=52.19  Aligned_cols=97  Identities=19%  Similarity=0.179  Sum_probs=62.4

Q ss_pred             cCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhc----CCc-----eEEcCCCCChhHHHHHHHH
Q 018529          165 AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF----GVT-----DFVNTSEHDRPIQEVIAEM  235 (354)
Q Consensus       165 ~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~l----g~~-----~v~~~~~~~~~~~~~i~~~  235 (354)
                      .+.+++.+||=+|||. |..++.+|+. |+ .|++++.+++-++.+++.    +..     ..+.  +.+  +...-...
T Consensus        52 l~~~~~~~vLD~GcG~-G~~~~~la~~-g~-~v~gvD~S~~ml~~A~~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~~  124 (292)
T d1xvaa_          52 LRQHGCHRVLDVACGT-GVDSIMLVEE-GF-SVTSVDASDKMLKYALKERWNRRKEPAFDKWVIE--EAN--WLTLDKDV  124 (292)
T ss_dssp             HHHTTCCEEEESSCTT-SHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEE--ECC--GGGHHHHS
T ss_pred             hhhcCCCEEEEecCCC-cHHHHHHHHc-CC-eeeeccCchHHHHHHHHHHHhcccccccceeeee--ecc--cccccccc
Confidence            3445678999899874 7778888875 88 899999999887777542    211     0111  111  21111223


Q ss_pred             cCC-CccEEEEcccC--------------hHhHHHHHHHhhCCCceEEE
Q 018529          236 TNG-GVDRSVECTGN--------------IDNMISAFECVHDGWGVAVL  269 (354)
Q Consensus       236 ~~~-~~dvv~d~~g~--------------~~~~~~~~~~l~~~~g~~v~  269 (354)
                      ... ++|.|+.....              ...++.+.+.|+|+ |.+++
T Consensus       125 ~~~~~fd~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~li~  172 (292)
T d1xvaa_         125 PAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPG-GLLVI  172 (292)
T ss_dssp             CCTTCEEEEEECSSCGGGSCCTTSSSHHHHHHHHHHHHTEEEE-EEEEE
T ss_pred             CCCCCceEEEEecCchhhcCCcccChHHHHHHHHHHHHHcCcC-cEEEE
Confidence            333 79999864321              12678899999997 99876

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.43  E-value=0.012  Score=47.65  Aligned_cols=47  Identities=30%  Similarity=0.326  Sum_probs=39.2

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-HhcCCc
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVT  216 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~~lg~~  216 (354)
                      +|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+ ++++..
T Consensus         4 kGKvalITGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~   52 (248)
T d2o23a1           4 KGLVAVITGGASGLGLATAERLVGQGA-SAVLLDLPNSGGEAQAKKLGNN   52 (248)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECTTSSHHHHHHHHCTT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCCC
Confidence            6899999987 9999999999999999 899999988776654 556553

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.42  E-value=0.047  Score=45.00  Aligned_cols=77  Identities=18%  Similarity=0.224  Sum_probs=45.0

Q ss_pred             eEEEEcC-ChhHHHHHHHHHHcCCc--EEEEEcCChhhHHH----HHhc---CCc-eEE--cCCCCChhHHHHHHHHcCC
Q 018529          172 SVAVFGL-GAVGLAAAEGARIAGAS--RIIGVDRSSKRFEE----AKKF---GVT-DFV--NTSEHDRPIQEVIAEMTNG  238 (354)
Q Consensus       172 ~vlI~G~-g~~G~~a~~~a~~~g~~--~vi~v~~~~~~~~~----~~~l---g~~-~v~--~~~~~~~~~~~~i~~~~~~  238 (354)
                      .|||+|+ +++|.+.+..+...|++  .|..+.++.++.+.    ++++   +.. ..+  |..+. ++..+.+.+...+
T Consensus         4 VvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~-~~~~~~~~~~~~g   82 (285)
T d1jtva_           4 VVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDS-KSVAAARERVTEG   82 (285)
T ss_dssp             EEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCH-HHHHHHHHTCTTS
T ss_pred             EEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccch-Hhhhhhhhhcccc
Confidence            4577787 99999988888888884  23344444443332    3333   222 122  33222 2344445555456


Q ss_pred             CccEEEEcccC
Q 018529          239 GVDRSVECTGN  249 (354)
Q Consensus       239 ~~dvv~d~~g~  249 (354)
                      ..|+++++.|.
T Consensus        83 ~idilvnnag~   93 (285)
T d1jtva_          83 RVDVLVCNAGL   93 (285)
T ss_dssp             CCSEEEECCCC
T ss_pred             chhhhhhcccc
Confidence            89999998874

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=95.40  E-value=0.034  Score=45.24  Aligned_cols=82  Identities=15%  Similarity=0.227  Sum_probs=53.3

Q ss_pred             CCCCCeEEEEcC-C--hhHHHHHHHHHHcCCcEEEEEcCChhhH-H-HHHhcCCce---EEcCCCCC--hhHHHHHHHHc
Q 018529          167 PERGSSVAVFGL-G--AVGLAAAEGARIAGASRIIGVDRSSKRF-E-EAKKFGVTD---FVNTSEHD--RPIQEVIAEMT  236 (354)
Q Consensus       167 ~~~~~~vlI~G~-g--~~G~~a~~~a~~~g~~~vi~v~~~~~~~-~-~~~~lg~~~---v~~~~~~~--~~~~~~i~~~~  236 (354)
                      +-+|+++||+|+ |  ++|.+.++-+...|+ +|+.+.++.++. + ..++++...   ..+..+.+  .++.+.+.+..
T Consensus         3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga-~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~   81 (268)
T d2h7ma1           3 LLDGKRILVSGIITDSSIAFHIARVAQEQGA-QLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAI   81 (268)
T ss_dssp             TTTTCEEEECCCSSTTCHHHHHHHHHHHTTC-EEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHcCC-EEEEEeCChHHHHHHHHHHcCCceeeEeeecccccccccccchhhhcc
Confidence            457899999984 4  599998888889999 888888887764 3 334455432   22232221  23444444433


Q ss_pred             C--CCccEEEEcccC
Q 018529          237 N--GGVDRSVECTGN  249 (354)
Q Consensus       237 ~--~~~dvv~d~~g~  249 (354)
                      .  +..|++++++|.
T Consensus        82 ~~~~~ld~~i~~ag~   96 (268)
T d2h7ma1          82 GAGNKLDGVVHSIGF   96 (268)
T ss_dssp             CTTCCEEEEEECCCC
T ss_pred             ccCCCcceeeecccc
Confidence            3  268999998873

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=95.38  E-value=0.0066  Score=46.97  Aligned_cols=37  Identities=19%  Similarity=0.248  Sum_probs=31.7

Q ss_pred             CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChh
Q 018529          169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK  205 (354)
Q Consensus       169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~  205 (354)
                      .+++|+|+|+|+.|+.++..+...|.+.|+++++++.
T Consensus         3 ~~~kVaIIGaGpaGl~aA~~l~~~G~~~V~v~E~~~~   39 (196)
T d1gtea4           3 YSAKIALLGAGPASISCASFLARLGYSDITIFEKQEY   39 (196)
T ss_dssp             GGCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred             CCCEEEEECChHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence            3689999999999999999999999855888877653

>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein MJ0882
domain: Hypothetical protein MJ0882
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=95.34  E-value=0.026  Score=43.68  Aligned_cols=98  Identities=13%  Similarity=0.155  Sum_probs=63.0

Q ss_pred             hhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCc--e--EEcCCCCChhHHHHH
Q 018529          161 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT--D--FVNTSEHDRPIQEVI  232 (354)
Q Consensus       161 l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~--~--v~~~~~~~~~~~~~i  232 (354)
                      +.+...+.++++||=+|+|. |..++.+++ .+. +|++++.+++..+.+++    .+..  .  ++..+     +.   
T Consensus        44 Li~~l~~~~~~~VLDiGcG~-G~~~~~la~-~~~-~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~~~d-----~~---  112 (194)
T d1dusa_          44 LVENVVVDKDDDILDLGCGY-GVIGIALAD-EVK-STTMADINRRAIKLAKENIKLNNLDNYDIRVVHSD-----LY---  112 (194)
T ss_dssp             HHHHCCCCTTCEEEEETCTT-SHHHHHHGG-GSS-EEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECS-----TT---
T ss_pred             HHHhCCcCCCCeEEEEeecC-ChhHHHHHh-hcc-ccceeeeccccchhHHHHHHHhCCccceEEEEEcc-----hh---
Confidence            34566788999999998864 566666665 345 89999999988888764    2331  1  22111     11   


Q ss_pred             HHHcCCCccEEEEccc---C----hHhHHHHHHHhhCCCceEEEE
Q 018529          233 AEMTNGGVDRSVECTG---N----IDNMISAFECVHDGWGVAVLV  270 (354)
Q Consensus       233 ~~~~~~~~dvv~d~~g---~----~~~~~~~~~~l~~~~g~~v~~  270 (354)
                      ....++.+|+|+....   +    ...++.+.+.|+++ |++++.
T Consensus       113 ~~~~~~~fD~Ii~~~p~~~~~~~~~~~l~~~~~~Lkpg-G~l~i~  156 (194)
T d1dusa_         113 ENVKDRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDN-GEIWVV  156 (194)
T ss_dssp             TTCTTSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             hhhccCCceEEEEcccEEecchhhhhHHHHHHHhcCcC-cEEEEE
Confidence            1122347999996322   2    13467788899997 987653

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=95.34  E-value=0.07  Score=35.88  Aligned_cols=73  Identities=21%  Similarity=0.283  Sum_probs=51.3

Q ss_pred             CCCCCCeEEEEcCChhHHHH-HHHHHHcCCcEEEEEcCCh-hhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEE
Q 018529          166 KPERGSSVAVFGLGAVGLAA-AEGARIAGASRIIGVDRSS-KRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRS  243 (354)
Q Consensus       166 ~~~~~~~vlI~G~g~~G~~a-~~~a~~~g~~~vi~v~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv  243 (354)
                      .++..+++.++|.|++|+.+ +++++..|. .|.+.|... ...+.+++.|+.....+....      +     .++|+|
T Consensus         4 ~~~~~~~ihfiGigG~GMs~LA~~L~~~G~-~VsGSD~~~~~~~~~L~~~Gi~v~~g~~~~~------i-----~~~d~v   71 (96)
T d1p3da1           4 EMRRVQQIHFIGIGGAGMSGIAEILLNEGY-QISGSDIADGVVTQRLAQAGAKIYIGHAEEH------I-----EGASVV   71 (96)
T ss_dssp             CCTTCCEEEEETTTSTTHHHHHHHHHHHTC-EEEEEESCCSHHHHHHHHTTCEEEESCCGGG------G-----TTCSEE
T ss_pred             cchhCCEEEEEEECHHHHHHHHHHHHhCCC-EEEEEeCCCChhhhHHHHCCCeEEECCcccc------C-----CCCCEE
Confidence            34667889999998888877 799999999 999999753 445566778986443332211      1     257888


Q ss_pred             EEcccCh
Q 018529          244 VECTGNI  250 (354)
Q Consensus       244 ~d~~g~~  250 (354)
                      +-+.+.+
T Consensus        72 V~S~AI~   78 (96)
T d1p3da1          72 VVSSAIK   78 (96)
T ss_dssp             EECTTSC
T ss_pred             EECCCcC
Confidence            8776643

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.32  E-value=0.038  Score=43.70  Aligned_cols=73  Identities=22%  Similarity=0.210  Sum_probs=47.6

Q ss_pred             CeEEEEcC-ChhHHHHHHHHHHcCCc-EEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEccc
Q 018529          171 SSVAVFGL-GAVGLAAAEGARIAGAS-RIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  248 (354)
Q Consensus       171 ~~vlI~G~-g~~G~~a~~~a~~~g~~-~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g  248 (354)
                      .+|||+|+ |.+|...+..+...|.. .|+.+.+++++.+.+.. +...+. .+-.+  .. .+.+.. .++|.|+.+++
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~~~-~~~~~~-~d~~~--~~-~~~~~~-~~~d~vi~~a~   77 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGG-EADVFI-GDITD--AD-SINPAF-QGIDALVILTS   77 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHTTC-CTTEEE-CCTTS--HH-HHHHHH-TTCSEEEECCC
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhccC-CcEEEE-eeecc--cc-cccccc-ccceeeEEEEe
Confidence            58999997 99999999999988863 57777788877665432 333322 22222  22 222322 25899998875


Q ss_pred             C
Q 018529          249 N  249 (354)
Q Consensus       249 ~  249 (354)
                      .
T Consensus        78 ~   78 (252)
T d2q46a1          78 A   78 (252)
T ss_dssp             C
T ss_pred             e
Confidence            3

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=95.27  E-value=0.0068  Score=51.15  Aligned_cols=94  Identities=19%  Similarity=0.213  Sum_probs=55.1

Q ss_pred             cCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHH---HHhcCCc-e--EEcCCCCChhHHHHHHHHcCC
Q 018529          165 AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEE---AKKFGVT-D--FVNTSEHDRPIQEVIAEMTNG  238 (354)
Q Consensus       165 ~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~---~~~lg~~-~--v~~~~~~~~~~~~~i~~~~~~  238 (354)
                      ..+.+|++||-+|+|. |.+++.+|+ .|+++|++++.++.....   +++.+.. .  ++.....+  +     ....+
T Consensus        29 ~~~~~~~~VLDiGcG~-G~ls~~aa~-~Ga~~V~avd~s~~~~~a~~~~~~n~~~~~v~~~~~~~~~--~-----~~~~~   99 (316)
T d1oria_          29 RHLFKDKVVLDVGSGT-GILCMFAAK-AGARKVIGIECSSISDYAVKIVKANKLDHVVTIIKGKVEE--V-----ELPVE   99 (316)
T ss_dssp             HHHHTTCEEEEETCTT-SHHHHHHHH-TTCSEEEEEECSTTHHHHHHHHHHTTCTTTEEEEESCTTT--C-----CCSSS
T ss_pred             cccCCcCEEEEEecCC-cHHHHHHHH-hCCCEEEEEcCcHHHhhhhhHHHHhCCccccceEeccHHH--c-----ccccc
Confidence            3456899999999875 777776666 687799999987643222   2223332 1  22221111  1     01123


Q ss_pred             CccEEEEc-ccC--------hHhHHHHHHHhhCCCceEE
Q 018529          239 GVDRSVEC-TGN--------IDNMISAFECVHDGWGVAV  268 (354)
Q Consensus       239 ~~dvv~d~-~g~--------~~~~~~~~~~l~~~~g~~v  268 (354)
                      .+|+|+.- .+.        +..+....+.|+++ |+++
T Consensus       100 ~~D~ivs~~~~~~l~~e~~~~~~l~~~~r~Lkp~-G~ii  137 (316)
T d1oria_         100 KVDIIISEWMGYCLFYESMLNTVLHARDKWLAPD-GLIF  137 (316)
T ss_dssp             CEEEEEECCCBBTBTBTCCHHHHHHHHHHHEEEE-EEEE
T ss_pred             eeEEEeeeeeeeeeccHHHHHHHHHHHHhcCCCC-eEEE
Confidence            78998752 221        13445566789997 8875

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=95.27  E-value=0.022  Score=47.87  Aligned_cols=100  Identities=19%  Similarity=0.206  Sum_probs=62.4

Q ss_pred             CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCceEEcCCCCChhHHHHHHHHc-CC-Ccc
Q 018529          168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMT-NG-GVD  241 (354)
Q Consensus       168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~~~-~~-~~d  241 (354)
                      .+|++||=.++|. |..++++|+  |+..|++++.+++..+.+++    .|.+.+-.. ..+  ..+.++.+. .+ .||
T Consensus       144 ~~g~rVLDl~~gt-G~~s~~~a~--g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~~i-~~d--~~~~~~~~~~~~~~fD  217 (318)
T d1wxxa2         144 FRGERALDVFSYA-GGFALHLAL--GFREVVAVDSSAEALRRAEENARLNGLGNVRVL-EAN--AFDLLRRLEKEGERFD  217 (318)
T ss_dssp             CCEEEEEEETCTT-THHHHHHHH--HEEEEEEEESCHHHHHHHHHHHHHTTCTTEEEE-ESC--HHHHHHHHHHTTCCEE
T ss_pred             hCCCeeeccCCCC-cHHHHHHHh--cCCcEEeecchHHHHHHHHHHHHHcCCCCccee-ecc--HHHHhhhhHhhhcCCC
Confidence            4689999887643 334455554  34499999999999888865    455432111 112  333333332 23 899


Q ss_pred             EEEEccc-----C----------hHhHHHHHHHhhCCCceEEEEcCCC
Q 018529          242 RSVECTG-----N----------IDNMISAFECVHDGWGVAVLVGVPS  274 (354)
Q Consensus       242 vv~d~~g-----~----------~~~~~~~~~~l~~~~g~~v~~g~~~  274 (354)
                      +|+--.+     .          .+++..+++.|+++ |.++++....
T Consensus       218 ~Vi~DpP~~~~~~~~~~~~~~~~~~l~~~a~~lLkpG-G~Lv~~scs~  264 (318)
T d1wxxa2         218 LVVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEG-GILATASCSH  264 (318)
T ss_dssp             EEEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEE-EEEEEEECCT
T ss_pred             EEEEcCCccccchHHHHHHHHHHHHHHHHHHHHcCCC-CEEEEEeCCc
Confidence            9985221     1          13566788889997 9998876543

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=95.21  E-value=0.028  Score=39.78  Aligned_cols=39  Identities=28%  Similarity=0.394  Sum_probs=33.9

Q ss_pred             CCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChh
Q 018529          166 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK  205 (354)
Q Consensus       166 ~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~  205 (354)
                      .++++++++|+|+|.+|.-++..+...|. +|..+++++.
T Consensus        26 ~~~~~~~vvIIGgG~iG~E~A~~l~~~g~-~Vtli~~~~~   64 (121)
T d1d7ya2          26 GLRPQSRLLIVGGGVIGLELAATARTAGV-HVSLVETQPR   64 (121)
T ss_dssp             HCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSSS
T ss_pred             hhhcCCeEEEECcchhHHHHHHHhhcccc-eEEEEeeccc
Confidence            35678999999999999999999999998 8988877653

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.18  E-value=0.06  Score=39.53  Aligned_cols=42  Identities=17%  Similarity=0.201  Sum_probs=33.1

Q ss_pred             CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcC--ChhhHHHH
Q 018529          168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDR--SSKRFEEA  210 (354)
Q Consensus       168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~--~~~~~~~~  210 (354)
                      -.|.+|||+|+|.+|..-+..+...|+ +|++++.  +++-.+++
T Consensus        11 l~gkrvLViGgG~va~~ka~~Ll~~GA-~VtVvap~~~~~l~~~~   54 (150)
T d1kyqa1          11 LKDKRILLIGGGEVGLTRLYKLMPTGC-KLTLVSPDLHKSIIPKF   54 (150)
T ss_dssp             CTTCEEEEEEESHHHHHHHHHHGGGTC-EEEEEEEEECTTHHHHH
T ss_pred             eCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCCCHHHHHHH
Confidence            357999999999999999999999999 7777743  34444444

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=95.18  E-value=0.025  Score=39.97  Aligned_cols=42  Identities=21%  Similarity=0.196  Sum_probs=35.5

Q ss_pred             hhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCCh
Q 018529          162 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  204 (354)
Q Consensus       162 ~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~  204 (354)
                      .+.....++++|+|+|+|.+|+-.++.+..+|. .|..+.+.+
T Consensus        14 ~~~l~~~~~~~vvVvGgG~ig~E~A~~l~~~g~-~vt~i~~~~   55 (121)
T d1mo9a2          14 VEELDYEPGSTVVVVGGSKTAVEYGCFFNATGR-RTVMLVRTE   55 (121)
T ss_dssp             HHHCCSCCCSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSC
T ss_pred             HHHHhhCCCCEEEEECCCHHHHHHHHHHHhcch-hheEeeccc
Confidence            344566788999999999999999999999998 888887654

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=95.11  E-value=0.18  Score=36.94  Aligned_cols=77  Identities=9%  Similarity=0.050  Sum_probs=52.8

Q ss_pred             CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhH-HH---HHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEE
Q 018529          169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRF-EE---AKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSV  244 (354)
Q Consensus       169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~-~~---~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~  244 (354)
                      +.++++|.|.|.+|...++.+...|. .|++++.++++. +.   +...|...+ .-+..+   .+.+++..-..+|.++
T Consensus         2 ~knHiII~G~g~~g~~l~~~L~~~~~-~v~vId~d~~~~~~~~~~~~~~~~~vi-~Gd~~d---~~~L~~a~i~~a~~vi   76 (153)
T d1id1a_           2 RKDHFIVCGHSILAINTILQLNQRGQ-NVTVISNLPEDDIKQLEQRLGDNADVI-PGDSND---SSVLKKAGIDRCRAIL   76 (153)
T ss_dssp             CCSCEEEECCSHHHHHHHHHHHHTTC-CEEEEECCCHHHHHHHHHHHCTTCEEE-ESCTTS---HHHHHHHTTTTCSEEE
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEeccchhHHHHHHHhhcCCcEEE-EccCcc---hHHHHHhccccCCEEE
Confidence            34689999999999999999999998 788888877542 22   233455433 333333   2345555444789999


Q ss_pred             EcccCh
Q 018529          245 ECTGNI  250 (354)
Q Consensus       245 d~~g~~  250 (354)
                      -+++..
T Consensus        77 ~~~~~d   82 (153)
T d1id1a_          77 ALSDND   82 (153)
T ss_dssp             ECSSCH
T ss_pred             EccccH
Confidence            998874

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=95.04  E-value=0.12  Score=37.79  Aligned_cols=39  Identities=26%  Similarity=0.377  Sum_probs=32.1

Q ss_pred             CCCCeEEEEcCChhHHHHHHHHHHcCC-cEEEEEcCChhh
Q 018529          168 ERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKR  206 (354)
Q Consensus       168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~-~~vi~v~~~~~~  206 (354)
                      +.+.+|.|+|+|.+|...+..+...+. ..++.+|.++++
T Consensus         4 ~~~~KI~IiGaG~vG~~~a~~l~~~~l~~el~L~Di~~~~   43 (148)
T d1ldna1           4 NGGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESK   43 (148)
T ss_dssp             TTSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHH
T ss_pred             CCCCeEEEECcCHHHHHHHHHHHhcCCCceEEEEeecccc
Confidence            356789999999999998888887764 479999988876

>d2o07a1 c.66.1.17 (A:16-300) Spermidine synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.02  E-value=0.045  Score=45.04  Aligned_cols=99  Identities=13%  Similarity=0.147  Sum_probs=65.4

Q ss_pred             CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCC--------ceEEcCCCCChhHHHHHHHHcCCC
Q 018529          168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV--------TDFVNTSEHDRPIQEVIAEMTNGG  239 (354)
Q Consensus       168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~--------~~v~~~~~~~~~~~~~i~~~~~~~  239 (354)
                      ...++|||+|+|. |..+-.+++..+..+|++++.+++-.+.++++-.        .++-....   +..+.+++ +.+.
T Consensus        77 ~~pk~vLiiGgG~-G~~~~~~l~~~~~~~v~~vEiD~~Vv~~a~~~~~~~~~~~~d~rv~i~~~---Da~~~l~~-~~~~  151 (285)
T d2o07a1          77 PNPRKVLIIGGGD-GGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVG---DGFEFMKQ-NQDA  151 (285)
T ss_dssp             SSCCEEEEEECTT-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEES---CHHHHHHT-CSSC
T ss_pred             cCcCeEEEeCCCc-hHHHHHHHHcCCcceeeeccCCHHHHHHHHhhchhhccccCCCCceEEEc---cHHHHHhc-CCCC
Confidence            4558999998764 5556667777777799999999998888877421        11111111   24555654 3348


Q ss_pred             ccEEE-Eccc---------ChHhHHHHHHHhhCCCceEEEEcC
Q 018529          240 VDRSV-ECTG---------NIDNMISAFECVHDGWGVAVLVGV  272 (354)
Q Consensus       240 ~dvv~-d~~g---------~~~~~~~~~~~l~~~~g~~v~~g~  272 (354)
                      +|+|+ |...         +.+.++.+.++|+++ |.++.-..
T Consensus       152 yDvIi~D~~~p~~~~~~L~t~eF~~~~~~~L~~~-Gi~v~q~~  193 (285)
T d2o07a1         152 FDVIITDSSDPMGPAESLFKESYYQLMKTALKED-GVLCCQGE  193 (285)
T ss_dssp             EEEEEEECC-----------CHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             CCEEEEcCCCCCCcccccccHHHHHHHHHhcCCC-CeEEEecc
Confidence            99987 4332         125688889999998 99887643

>d2fcaa1 c.66.1.53 (A:10-213) tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TrmB-like
domain: tRNA (guanine-N(7)-)-methyltransferase TrmB
species: Bacillus subtilis [TaxId: 1423]

Probab=95.01  E-value=0.13  Score=39.86  Aligned_cols=95  Identities=15%  Similarity=0.076  Sum_probs=64.1

Q ss_pred             CeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH----HhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEc
Q 018529          171 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  246 (354)
Q Consensus       171 ~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~----~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~  246 (354)
                      ..||=+|+|. |..++.+|+..--..+++++.++...+.+    ++.|.+.+.....+   .......+..+.+|.|+-.
T Consensus        31 PlvLeIGcG~-G~~~~~lA~~~p~~~~iGiD~~~~~i~~a~~~~~~~~l~Nv~~~~~D---a~~l~~~~~~~~~d~v~i~  106 (204)
T d2fcaa1          31 PIHIEVGTGK-GQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNID---ADTLTDVFEPGEVKRVYLN  106 (204)
T ss_dssp             CEEEEECCTT-SHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCC---GGGHHHHCCTTSCCEEEEE
T ss_pred             ceEEEEEecC-cHHHHHHHHhCCCCcEEEeecchHHHHHHHHHHHHHhccCchhcccc---hhhhhcccCchhhhccccc
Confidence            3455568875 88888899987444999999999877665    44677654333322   2122233334478988765


Q ss_pred             ccC--------------hHhHHHHHHHhhCCCceEEEE
Q 018529          247 TGN--------------IDNMISAFECVHDGWGVAVLV  270 (354)
Q Consensus       247 ~g~--------------~~~~~~~~~~l~~~~g~~v~~  270 (354)
                      ...              ++.++.+.+.|+++ |.+.+.
T Consensus       107 fp~P~~k~~h~k~Rl~~~~~l~~~~r~Lkpg-G~l~i~  143 (204)
T d2fcaa1         107 FSDPWPKKRHEKRRLTYSHFLKKYEEVMGKG-GSIHFK  143 (204)
T ss_dssp             SCCCCCSGGGGGGSTTSHHHHHHHHHHHTTS-CEEEEE
T ss_pred             cccccchhhhcchhhhHHHHHHHHHHhCCCC-cEEEEE
Confidence            443              36888999999997 998776

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=94.94  E-value=0.022  Score=48.31  Aligned_cols=47  Identities=28%  Similarity=0.292  Sum_probs=39.1

Q ss_pred             hcCCCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH
Q 018529          164 VAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK  211 (354)
Q Consensus       164 ~~~~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~  211 (354)
                      ..-+.+|++|||+|+ |-+|...+..+...|+ .|+++.++.++.+.++
T Consensus         5 ~~~~~~gk~VlVTG~sGfIGs~l~~~Ll~~G~-~V~~~vR~~~~~~~~~   52 (342)
T d1y1pa1           5 NAVLPEGSLVLVTGANGFVASHVVEQLLEHGY-KVRGTARSASKLANLQ   52 (342)
T ss_dssp             TCSSCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHH
T ss_pred             CCCCCCcCEEEEECCCCHHHHHHHHHHHHCcC-EEEEEeCCchhHHHHH
Confidence            345678999999987 9999999988888898 8998888887766554

>d1p91a_ c.66.1.33 (A:) rRNA methyltransferase RlmA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: rRNA methyltransferase RlmA
domain: rRNA methyltransferase RlmA
species: Escherichia coli [TaxId: 562]

Probab=94.94  E-value=0.027  Score=46.07  Aligned_cols=94  Identities=18%  Similarity=0.187  Sum_probs=65.0

Q ss_pred             CCCCCeEEEEcCChhHHHHHHHHHHc-CCcEEEEEcCChhhHHHHHhcCCce-EEcCCCCChhHHHHHHHHcCCCccEEE
Q 018529          167 PERGSSVAVFGLGAVGLAAAEGARIA-GASRIIGVDRSSKRFEEAKKFGVTD-FVNTSEHDRPIQEVIAEMTNGGVDRSV  244 (354)
Q Consensus       167 ~~~~~~vlI~G~g~~G~~a~~~a~~~-g~~~vi~v~~~~~~~~~~~~lg~~~-v~~~~~~~~~~~~~i~~~~~~~~dvv~  244 (354)
                      ..++.+||=+|+|. |..+..+++.. +. .++++|.+++..+.+++..... .+..+..+  +     .+..+.+|+|+
T Consensus        82 ~~~~~~iLDiGcG~-G~~~~~l~~~~~~~-~~~giD~s~~~~~~a~~~~~~~~~~~~d~~~--l-----~~~~~sfD~v~  152 (268)
T d1p91a_          82 DDKATAVLDIGCGE-GYYTHAFADALPEI-TTFGLDVSKVAIKAAAKRYPQVTFCVASSHR--L-----PFSDTSMDAII  152 (268)
T ss_dssp             CTTCCEEEEETCTT-STTHHHHHHTCTTS-EEEEEESCHHHHHHHHHHCTTSEEEECCTTS--C-----SBCTTCEEEEE
T ss_pred             CCCCCEEEEeCCCC-cHHHHHHHHHCCCC-EEEEecchHhhhhhhhcccccccceeeehhh--c-----cCCCCCEEEEe
Confidence            46778899899874 67777777776 45 9999999999998887643322 22111111  0     01223799999


Q ss_pred             EcccChHhHHHHHHHhhCCCceEEEEc
Q 018529          245 ECTGNIDNMISAFECVHDGWGVAVLVG  271 (354)
Q Consensus       245 d~~g~~~~~~~~~~~l~~~~g~~v~~g  271 (354)
                      ... .+..+..+.+.|+++ |.+++..
T Consensus       153 ~~~-~~~~~~e~~rvLkpg-G~l~~~~  177 (268)
T d1p91a_         153 RIY-APCKAEELARVVKPG-GWVITAT  177 (268)
T ss_dssp             EES-CCCCHHHHHHHEEEE-EEEEEEE
T ss_pred             ecC-CHHHHHHHHHHhCCC-cEEEEEe
Confidence            654 346788999999997 9988764

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=94.93  E-value=0.017  Score=44.12  Aligned_cols=38  Identities=32%  Similarity=0.371  Sum_probs=33.5

Q ss_pred             CCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCCh
Q 018529          166 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  204 (354)
Q Consensus       166 ~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~  204 (354)
                      ....+++|+|+|+|+.|+.|+..+...|. +|+..+.++
T Consensus        39 ~~~~~k~V~IIGaGPAGL~AA~~la~~G~-~Vtl~E~~~   76 (179)
T d1ps9a3          39 PAVQKKNLAVVGAGPAGLAFAINAAARGH-QVTLFDAHS   76 (179)
T ss_dssp             SCSSCCEEEEECCSHHHHHHHHHHHTTTC-EEEEEESSS
T ss_pred             CCCCCcEEEEECccHHHHHHHHHHHhhcc-ceEEEeccC
Confidence            34557899999999999999999999999 999998765

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=94.86  E-value=0.025  Score=45.44  Aligned_cols=90  Identities=18%  Similarity=0.190  Sum_probs=58.4

Q ss_pred             CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCceEEcCCCCChhHHHHHHHHc-CCCccE
Q 018529          168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMT-NGGVDR  242 (354)
Q Consensus       168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~~~-~~~~dv  242 (354)
                      .++++||=+|||. |..+..+++ .|. .|++++.+++-.+.+++    .|...-+...  +      +..+. .+.||+
T Consensus        36 ~~~~~vLDiGCG~-G~~~~~l~~-~g~-~v~GvD~S~~ml~~A~~~~~~~~~~v~~~~~--d------~~~~~~~~~fD~  104 (246)
T d1y8ca_          36 LVFDDYLDLACGT-GNLTENLCP-KFK-NTWAVDLSQEMLSEAENKFRSQGLKPRLACQ--D------ISNLNINRKFDL  104 (246)
T ss_dssp             CCTTEEEEETCTT-STTHHHHGG-GSS-EEEEECSCHHHHHHHHHHHHHTTCCCEEECC--C------GGGCCCSCCEEE
T ss_pred             CCCCeEEEEeCcC-CHHHHHHHH-hCC-ccEeeccchhhhhhccccccccCccceeecc--c------hhhhcccccccc
Confidence            4457899999873 677777776 477 89999999988777654    3432212111  1      11222 347999


Q ss_pred             EEEcccC------h----HhHHHHHHHhhCCCceEEE
Q 018529          243 SVECTGN------I----DNMISAFECVHDGWGVAVL  269 (354)
Q Consensus       243 v~d~~g~------~----~~~~~~~~~l~~~~g~~v~  269 (354)
                      |+...+.      +    ..+..+.+.|+++ |.+++
T Consensus       105 i~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~~i~  140 (246)
T d1y8ca_         105 ITCCLDSTNYIIDSDDLKKYFKAVSNHLKEG-GVFIF  140 (246)
T ss_dssp             EEECTTGGGGCCSHHHHHHHHHHHHTTEEEE-EEEEE
T ss_pred             cceeeeeeeccCCHHHHHHHHHHHHHhCCCC-eEEEE
Confidence            9964331      1    2567788889997 98875

>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Methanothermus fervidus [TaxId: 2180]

Probab=94.86  E-value=0.11  Score=39.04  Aligned_cols=101  Identities=22%  Similarity=0.267  Sum_probs=62.2

Q ss_pred             eEEEEcCChhHHHHHHHHHHcCCcEEEEEcC-C-hhhHHHHHhcCCceEEcCCCCChhHHH-------HHHHHcCCCccE
Q 018529          172 SVAVFGLGAVGLAAAEGARIAGASRIIGVDR-S-SKRFEEAKKFGVTDFVNTSEHDRPIQE-------VIAEMTNGGVDR  242 (354)
Q Consensus       172 ~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~-~-~~~~~~~~~lg~~~v~~~~~~~~~~~~-------~i~~~~~~~~dv  242 (354)
                      +|.|.|-|-+|...+..+...+--.++++.. + ......+.+++.+......+....+.+       .+.++. .++|+
T Consensus         3 ~VgINGfGRIGR~v~R~l~~~~di~vvaInd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~g~~~~~~-~~vDv   81 (171)
T d1cf2o1           3 AVAINGYGTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDML-DEADI   81 (171)
T ss_dssp             EEEEECCSHHHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHHH-HTCSE
T ss_pred             EEEEEcCcHHHHHHHHHHHhCCCceEEEEecCCcHHHHHHHHhcCCceEecccccceeecccCcccCCChhHhh-cCCCE
Confidence            6889999999999888776655226666532 2 244455666666543332221110100       011111 25999


Q ss_pred             EEEcccChHhHHHHHHHhhCCCceEEEEcCCC
Q 018529          243 SVECTGNIDNMISAFECVHDGWGVAVLVGVPS  274 (354)
Q Consensus       243 v~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~  274 (354)
                      |+||+|.....+.+-..+..+ -++++.+...
T Consensus        82 ViEcTG~f~~~~~~~~hl~~G-~K~vi~~~~~  112 (171)
T d1cf2o1          82 VIDCTPEGIGAKNLKMYKEKG-IKAIFQGGEK  112 (171)
T ss_dssp             EEECCSTTHHHHHHHHHHHTT-CEEEECTTSC
T ss_pred             EEEccCCCCCHHHHHHHHHcC-CCEEEECCCC
Confidence            999999877777888889886 7877776543

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=94.83  E-value=0.031  Score=47.47  Aligned_cols=37  Identities=24%  Similarity=0.215  Sum_probs=32.6

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhh
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR  206 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~  206 (354)
                      ++++|||+|+ |-+|...+..+...|. .|+++++++.+
T Consensus         7 ~~KkILVTG~tGfIGs~lv~~Ll~~g~-~V~~~~r~~~~   44 (356)
T d1rkxa_           7 QGKRVFVTGHTGFKGGWLSLWLQTMGA-TVKGYSLTAPT   44 (356)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCSS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCCCc
Confidence            4689999987 9999999999999999 89999887654

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=94.80  E-value=0.082  Score=40.23  Aligned_cols=93  Identities=16%  Similarity=0.204  Sum_probs=62.4

Q ss_pred             eEEEEcCChhHHHHHHHHHHc-CCcEEEEE-cCChhhHHH-HHhcCCce-EEcCCCCChhHHHHHHHHcCCCccEEEEcc
Q 018529          172 SVAVFGLGAVGLAAAEGARIA-GASRIIGV-DRSSKRFEE-AKKFGVTD-FVNTSEHDRPIQEVIAEMTNGGVDRSVECT  247 (354)
Q Consensus       172 ~vlI~G~g~~G~~a~~~a~~~-g~~~vi~v-~~~~~~~~~-~~~lg~~~-v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~  247 (354)
                      ++.|+|+|.+|...+..++.. +. .++++ ++++++.+. +++++... .-.+.+    +.+.+.+   ..+|+|+.++
T Consensus         3 ki~iIG~G~~g~~~~~~l~~~~~~-~i~ai~d~~~~~~~~~~~~~~~~~~~~~~~~----~~~ll~~---~~iD~v~I~t   74 (184)
T d1ydwa1           3 RIGVMGCADIARKVSRAIHLAPNA-TISGVASRSLEKAKAFATANNYPESTKIHGS----YESLLED---PEIDALYVPL   74 (184)
T ss_dssp             EEEEESCCTTHHHHHHHHHHCTTE-EEEEEECSSHHHHHHHHHHTTCCTTCEEESS----HHHHHHC---TTCCEEEECC
T ss_pred             EEEEEcCCHHHHHHHHHHHhCCCC-EEEEEEeCCccccccchhccccccceeecCc----HHHhhhc---cccceeeecc
Confidence            578899999999888888776 45 66654 667766544 45566531 111111    4443332   3699999999


Q ss_pred             cChHhHHHHHHHhhCCCceEEEEcCCC
Q 018529          248 GNIDNMISAFECVHDGWGVAVLVGVPS  274 (354)
Q Consensus       248 g~~~~~~~~~~~l~~~~g~~v~~g~~~  274 (354)
                      +.....+.+..++..  |.=+++.-+.
T Consensus        75 p~~~h~~~~~~~l~~--g~~v~~EKP~   99 (184)
T d1ydwa1          75 PTSLHVEWAIKAAEK--GKHILLEKPV   99 (184)
T ss_dssp             CGGGHHHHHHHHHTT--TCEEEECSSC
T ss_pred             cchhhcchhhhhhhc--cceeeccccc
Confidence            887888888888887  5667776543

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=94.79  E-value=0.026  Score=39.72  Aligned_cols=38  Identities=11%  Similarity=0.175  Sum_probs=32.9

Q ss_pred             CCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCCh
Q 018529          166 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  204 (354)
Q Consensus       166 ~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~  204 (354)
                      .++..++|+|+|+|.+|+-.++.+..+|. +|..+.+.+
T Consensus        18 ~l~~p~~v~IiGgG~iG~E~A~~l~~~g~-~Vtlv~~~~   55 (117)
T d1onfa2          18 NIKESKKIGIVGSGYIAVELINVIKRLGI-DSYIFARGN   55 (117)
T ss_dssp             TCCCCSEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSS
T ss_pred             ccCCCCEEEEECCchHHHHHHHHHHhccc-cceeeehhc
Confidence            44556899999999999999999999999 899997654

>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative oxidoreductase VCA1048
species: Vibrio cholerae [TaxId: 666]

Probab=94.74  E-value=0.064  Score=40.17  Aligned_cols=91  Identities=18%  Similarity=0.216  Sum_probs=60.6

Q ss_pred             eEEEEcCChhHHH-HHHHHHHcCCcEEEEEcCChhhHHHH-HhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcccC
Q 018529          172 SVAVFGLGAVGLA-AAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN  249 (354)
Q Consensus       172 ~vlI~G~g~~G~~-a~~~a~~~g~~~vi~v~~~~~~~~~~-~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~  249 (354)
                      +|.|+|+|.+|.- .+...+..+.-.+++++.++++.+.+ ++++...++  .+    +.+.+    ...+|+|+.+++.
T Consensus         3 rvgiiG~G~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~--~~----~~~ll----~~~iD~V~I~tp~   72 (167)
T d1xeaa1           3 KIAMIGLGDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRYRVSATC--TD----YRDVL----QYGVDAVMIHAAT   72 (167)
T ss_dssp             EEEEECCCHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHHTTCCCCC--SS----TTGGG----GGCCSEEEECSCG
T ss_pred             EEEEEcCCHHHHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHhccccccc--cc----HHHhc----ccccceecccccc
Confidence            5789999999964 55555555332667788888776655 557765432  22    11112    1258999999988


Q ss_pred             hHhHHHHHHHhhCCCceEEEEcCCC
Q 018529          250 IDNMISAFECVHDGWGVAVLVGVPS  274 (354)
Q Consensus       250 ~~~~~~~~~~l~~~~g~~v~~g~~~  274 (354)
                      ....+.+..++..  |.=+++.-+.
T Consensus        73 ~~H~~~~~~al~~--gk~V~~EKP~   95 (167)
T d1xeaa1          73 DVHSTLAAFFLHL--GIPTFVDKPL   95 (167)
T ss_dssp             GGHHHHHHHHHHT--TCCEEEESCS
T ss_pred             ccccccccccccc--ccccccCCCC
Confidence            7888889999987  4556776543

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=94.72  E-value=0.018  Score=46.58  Aligned_cols=35  Identities=34%  Similarity=0.305  Sum_probs=31.1

Q ss_pred             CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCCh
Q 018529          169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  204 (354)
Q Consensus       169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~  204 (354)
                      ..++|+|+|+|+.|++++..+...|. +|+++++++
T Consensus         3 ~~~kV~IiGaG~aGl~~A~~L~~~G~-~v~v~Er~~   37 (265)
T d2voua1           3 TTDRIAVVGGSISGLTAALMLRDAGV-DVDVYERSP   37 (265)
T ss_dssp             CCSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             CCCcEEEECcCHHHHHHHHHHHHCCC-CEEEEeCCC
Confidence            46789999999999999999999999 999998754

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=94.72  E-value=0.2  Score=36.62  Aligned_cols=98  Identities=14%  Similarity=0.290  Sum_probs=64.8

Q ss_pred             eEEEEcC-ChhHHHHHHHHHHcC--CcEEEEEcCChhh---HHHHHhcCCceEEcCCCCC-hhHHH--------------
Q 018529          172 SVAVFGL-GAVGLAAAEGARIAG--ASRIIGVDRSSKR---FEEAKKFGVTDFVNTSEHD-RPIQE--------------  230 (354)
Q Consensus       172 ~vlI~G~-g~~G~~a~~~a~~~g--~~~vi~v~~~~~~---~~~~~~lg~~~v~~~~~~~-~~~~~--------------  230 (354)
                      +|.|+|+ |.+|..++.+.+...  . +|++++....-   .+.+++|....++..++.. ..+.+              
T Consensus         3 ~I~IlGsTGSIG~~tL~Vi~~~~d~f-~v~~Lsa~~N~~~L~~q~~~f~pk~v~i~d~~~~~~l~~~l~~~~~~~~~~~g   81 (151)
T d1q0qa2           3 QLTILGSTGSIGCSTLDVVRHNPEHF-RVVALVAGKNVTRMVEQCLEFSPRYAVMDDEASAKLLKTMLQQQGSRTEVLSG   81 (151)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTTE-EEEEEEESSCHHHHHHHHHHHCCSEEEESSHHHHHHHHHHHHHTTCCCEEEES
T ss_pred             eEEEEcCCcHHHHHHHHHHHhCCCCc-EEEEEEecCcHHHHHHHHHHHhhcccccccHHHHHHHHHHhhhhccccccccC
Confidence            6889998 999999999999873  4 77777654433   2344668887776554322 11111              


Q ss_pred             --HHHHHcCC-CccEEEEcccChHhHHHHHHHhhCCCceEEEEcC
Q 018529          231 --VIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGV  272 (354)
Q Consensus       231 --~i~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~  272 (354)
                        .+.++... .+|+|+.+..+...+.-.+..++.+  +-+.+++
T Consensus        82 ~~~l~~~~~~~~~D~vi~AI~G~aGL~~t~~aik~g--k~iaLAN  124 (151)
T d1q0qa2          82 QQAACDMAALEDVDQVMAAIVGAAGLLPTLAAIRAG--KTILLAN  124 (151)
T ss_dssp             HHHHHHHHTCTTCCEEEECCSSGGGHHHHHHHHHTT--CEEEECC
T ss_pred             hHHHHHHhcCCCCCEEEEecCcccHHHHHHHHHhcC--CeEEEEc
Confidence              22222223 6899999987778888899999884  4455544

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.71  E-value=0.032  Score=43.10  Aligned_cols=40  Identities=28%  Similarity=0.412  Sum_probs=35.1

Q ss_pred             CeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH
Q 018529          171 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK  211 (354)
Q Consensus       171 ~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~  211 (354)
                      ++|.|+|+|.+|...++++...|. .|+..+++++.++.++
T Consensus         5 kkvaViGaG~mG~~iA~~~a~~G~-~V~l~D~~~~~l~~a~   44 (192)
T d1f0ya2           5 KHVTVIGGGLMGAGIAQVAAATGH-TVVLVDQTEDILAKSK   44 (192)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHH
T ss_pred             EEEEEECcCHHHHHHHHHHHhCCC-cEEEEECChHHHHHHH
Confidence            589999999999998888889999 9999999998766553

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=94.70  E-value=0.074  Score=40.92  Aligned_cols=91  Identities=21%  Similarity=0.215  Sum_probs=59.5

Q ss_pred             CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcc
Q 018529          168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  247 (354)
Q Consensus       168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~  247 (354)
                      -.|.+|.|+|.|.+|...+++++.+|. +|++.++...... ....+...   ..+    +.+.+++     .|+|.-+.
T Consensus        47 L~gktvgIiG~G~IG~~va~~l~~fg~-~v~~~d~~~~~~~-~~~~~~~~---~~~----l~~ll~~-----sD~i~~~~  112 (193)
T d1mx3a1          47 IRGETLGIIGLGRVGQAVALRAKAFGF-NVLFYDPYLSDGV-ERALGLQR---VST----LQDLLFH-----SDCVTLHC  112 (193)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECTTSCTTH-HHHHTCEE---CSS----HHHHHHH-----CSEEEECC
T ss_pred             eeCceEEEeccccccccceeeeecccc-ceeeccCcccccc-hhhhcccc---ccc----hhhcccc-----CCEEEEee
Confidence            467899999999999999999999999 8999877544322 22334321   111    4444433     58887766


Q ss_pred             cCh-H---h-HHHHHHHhhCCCceEEEEcCC
Q 018529          248 GNI-D---N-MISAFECVHDGWGVAVLVGVP  273 (354)
Q Consensus       248 g~~-~---~-~~~~~~~l~~~~g~~v~~g~~  273 (354)
                      +.. +   . -...++.|+++ ..++.++..
T Consensus       113 plt~~T~~li~~~~l~~mk~~-a~lIN~sRG  142 (193)
T d1mx3a1         113 GLNEHNHHLINDFTVKQMRQG-AFLVNTARG  142 (193)
T ss_dssp             CCCTTCTTSBSHHHHTTSCTT-EEEEECSCT
T ss_pred             cccccchhhhhHHHHhccCCC-CeEEecCCc
Confidence            532 1   1 22566778886 777766553

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=94.70  E-value=0.11  Score=41.51  Aligned_cols=34  Identities=32%  Similarity=0.428  Sum_probs=30.8

Q ss_pred             CCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCC
Q 018529          170 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS  203 (354)
Q Consensus       170 ~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~  203 (354)
                      ..+|+|+|+|++|..+++.+-..|.++++.+|.+
T Consensus        30 ~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~D   63 (247)
T d1jw9b_          30 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFD   63 (247)
T ss_dssp             HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred             CCCEEEECCCHHHHHHHHHHHHcCCCeEEEECCc
Confidence            4689999999999999999999999999999753

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=94.66  E-value=0.28  Score=35.08  Aligned_cols=27  Identities=26%  Similarity=0.393  Sum_probs=20.1

Q ss_pred             eEEEEcC-ChhHHHHHHHHHHc-CCcEEEE
Q 018529          172 SVAVFGL-GAVGLAAAEGARIA-GASRIIG  199 (354)
Q Consensus       172 ~vlI~G~-g~~G~~a~~~a~~~-g~~~vi~  199 (354)
                      +|.|.|+ |-||...+..+... +. .+++
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~-~l~~   29 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDL-TLSA   29 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTS-EEEE
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCC-EEEE
Confidence            5889997 99999988877654 55 4443

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=94.62  E-value=0.042  Score=42.26  Aligned_cols=83  Identities=14%  Similarity=0.071  Sum_probs=53.5

Q ss_pred             CeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCce-----EEcCCCC--ChhHHHHHHHHcCCCccEE
Q 018529          171 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD-----FVNTSEH--DRPIQEVIAEMTNGGVDRS  243 (354)
Q Consensus       171 ~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~-----v~~~~~~--~~~~~~~i~~~~~~~~dvv  243 (354)
                      .+|.|+|+|..|.+.+..+-..|. .|....++++..+.+.+-+...     +...++-  ..++.+.++     +.|+|
T Consensus         8 ~KI~ViGaG~wGtAlA~~La~~g~-~V~l~~r~~~~~~~i~~~~~n~~yl~~~~l~~~i~~t~~l~~a~~-----~ad~i   81 (189)
T d1n1ea2           8 NKAVVFGSGAFGTALAMVLSKKCR-EVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAYN-----GAEII   81 (189)
T ss_dssp             EEEEEECCSHHHHHHHHHHHTTEE-EEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHHT-----TCSCE
T ss_pred             ceEEEECCCHHHHHHHHHHHHcCC-eEEEEEecHHHHHHHhhcccccccccccccccccccchhhhhccC-----CCCEE
Confidence            369999999999998877777776 8999999999888776533110     0000000  011333332     47999


Q ss_pred             EEcccChHhHHHHHHHh
Q 018529          244 VECTGNIDNMISAFECV  260 (354)
Q Consensus       244 ~d~~g~~~~~~~~~~~l  260 (354)
                      +-++++ ..++..++.+
T Consensus        82 iiavPs-~~~~~~~~~~   97 (189)
T d1n1ea2          82 LFVIPT-QFLRGFFEKS   97 (189)
T ss_dssp             EECSCH-HHHHHHHHHH
T ss_pred             EEcCcH-HHHHHHHHHH
Confidence            999987 5555555543

>d2avda1 c.66.1.1 (A:44-262) COMT domain-containing protein 1, COMTD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: COMT domain-containing protein 1, COMTD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.62  E-value=0.042  Score=43.37  Aligned_cols=105  Identities=15%  Similarity=0.165  Sum_probs=67.9

Q ss_pred             hcCCCCCCeEEEEcCChhHHHHHHHHHHcCC-cEEEEEcCChhhHHHHHh----cCCceEEcCCCCChhHHHHHHHH---
Q 018529          164 VAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEM---  235 (354)
Q Consensus       164 ~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~-~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~~---  235 (354)
                      ..+....++||=+|++ .|+.++.+|+.+.. .+|+.++.+++..+.+++    .|....+.....+  ..+.+.++   
T Consensus        54 L~~~~~~k~vLEiGt~-~GyStl~~a~al~~~g~i~tie~~~~~~~~A~~~~~~ag~~~~i~~~~Gd--a~e~l~~~~~~  130 (219)
T d2avda1          54 LARLIQAKKALDLGTF-TGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKP--ALETLDELLAA  130 (219)
T ss_dssp             HHHHTTCCEEEEECCT-TSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESC--HHHHHHHHHHT
T ss_pred             HHHccCCCeEEEEech-hhHHHHHHHHhCCCCceEEEEeechhHHHHHHHHHHhcCccceEEEEEee--hhhcchhhhhh
Confidence            3444566899999975 48888888887632 299999999998777654    4553322222222  33333332   


Q ss_pred             -cCCCccEEEEcccC---hHhHHHHHHHhhCCCceEEEEcC
Q 018529          236 -TNGGVDRSVECTGN---IDNMISAFECVHDGWGVAVLVGV  272 (354)
Q Consensus       236 -~~~~~dvv~d~~g~---~~~~~~~~~~l~~~~g~~v~~g~  272 (354)
                       ..+.||.||--...   ...++.+++.|+++ |.++.=..
T Consensus       131 ~~~~~fD~ifiD~dk~~y~~~~~~~~~lL~~G-Gvii~Dn~  170 (219)
T d2avda1         131 GEAGTFDVAVVDADKENCSAYYERCLQLLRPG-GILAVLRV  170 (219)
T ss_dssp             TCTTCEEEEEECSCSTTHHHHHHHHHHHEEEE-EEEEEECC
T ss_pred             cccCCccEEEEeCCHHHHHHHHHHHHHHhcCC-cEEEEeCC
Confidence             23379999854332   24578899999996 87766443

>d1jbqa_ c.79.1.1 (A:) Cystathionine beta-synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Cystathionine beta-synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.60  E-value=0.34  Score=40.94  Aligned_cols=109  Identities=17%  Similarity=0.162  Sum_probs=69.7

Q ss_pred             hhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEc--CChhhHHHHHhcCCceEEcCCCC---------------
Q 018529          162 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVD--RSSKRFEEAKKFGVTDFVNTSEH---------------  224 (354)
Q Consensus       162 ~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~--~~~~~~~~~~~lg~~~v~~~~~~---------------  224 (354)
                      .+...+++++.|+...+|..|.+.+.+|+.+|.+-++++.  .+++|.+.++.+|++.+......               
T Consensus        89 ~~~g~~~~~~~vv~aSsGN~g~a~A~~a~~~Gi~~~iv~p~~~~~~k~~~i~~~GA~vv~v~~~~~~~~~~~~~~~~~~~  168 (355)
T d1jbqa_          89 ERDGTLKPGDTIIEPTSGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDVLRALGAEIVRTPTNARFDSPESHVGVAWRL  168 (355)
T ss_dssp             HHHTCSCTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEECSCCCHHHHHHHHHTTCEEEECCC-------CCHHHHHHHH
T ss_pred             HHcCCcccCceEEEecccchhhHHHHHHHhccCCeEEEeeccchHHHHHHHHhcCCeEEEecccccchhhhhhhhHHHHH
Confidence            3455667777776667899999999999999995444443  35678889999999765422110               


Q ss_pred             ---------------C-------hhHHHHHHHHcCCCccEEEEcccChHhHHHHHH---HhhCCCceEEEEc
Q 018529          225 ---------------D-------RPIQEVIAEMTNGGVDRSVECTGNIDNMISAFE---CVHDGWGVAVLVG  271 (354)
Q Consensus       225 ---------------~-------~~~~~~i~~~~~~~~dvv~d~~g~~~~~~~~~~---~l~~~~g~~v~~g  271 (354)
                                     +       .....++.+..++.+|.|+.++|+-.++.-..+   ...+. -+++.+.
T Consensus       169 ~~~~~~~~~~~~~~~~~~~~ag~~t~~~EI~~ql~~~~d~vv~~vG~GG~~~Gi~~~lk~~~~~-~kii~ve  239 (355)
T d1jbqa_         169 KNEIPNSHILDQYRNASNPLAHYDTTADEILQQCDGKLDMLVASVGTGGTITGIARKLKEKCPG-CRIIGVD  239 (355)
T ss_dssp             HHHSTTEECCCTTTCTHHHHHHHHTHHHHHHHHHTTCCCEEEEECSSSHHHHHHHHHHHHHCTT-CEEEEEE
T ss_pred             HHhccccccccccCcccchhhhcccchhhhhhhcCCCCCeeEecccCCchHHHHHHHHhhcCCc-ceEEeec
Confidence                           0       001223333334468999999987655554444   44455 6666554

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=94.60  E-value=0.1  Score=43.48  Aligned_cols=74  Identities=18%  Similarity=0.244  Sum_probs=45.4

Q ss_pred             eEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcC-----ChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC-CccEEE
Q 018529          172 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDR-----SSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSV  244 (354)
Q Consensus       172 ~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~-----~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~~dvv~  244 (354)
                      +|||+|+ |-+|...+..+...|. .|+++++     ..++.+.+...+--.++..+=.+.   +.+.++..+ ++|+||
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~-~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~~---~~l~~~~~~~~~d~Vi   77 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGI-DLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNK---NDVTRLITKYMPDSCF   77 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCH---HHHHHHHHHHCCSEEE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcC-EEEEEECCCcccchhHHHHhhccCCcEEEEcccCCH---HHHHHHHHhcCCceEE
Confidence            6999987 9999999998888898 8888863     222334444443323332221221   123333323 689999


Q ss_pred             EcccC
Q 018529          245 ECTGN  249 (354)
Q Consensus       245 d~~g~  249 (354)
                      .+++.
T Consensus        78 h~aa~   82 (338)
T d1orra_          78 HLAGQ   82 (338)
T ss_dssp             ECCCC
T ss_pred             eeccc
Confidence            98753

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=94.58  E-value=0.027  Score=39.53  Aligned_cols=35  Identities=17%  Similarity=0.276  Sum_probs=31.0

Q ss_pred             CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCCh
Q 018529          169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  204 (354)
Q Consensus       169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~  204 (354)
                      ..++++|+|+|.+|+-+++.+..+|. +|..+.+.+
T Consensus        21 ~p~~v~IiGgG~ig~E~A~~l~~~G~-~Vtlve~~~   55 (117)
T d1ebda2          21 VPKSLVVIGGGYIGIELGTAYANFGT-KVTILEGAG   55 (117)
T ss_dssp             CCSEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSS
T ss_pred             cCCeEEEECCCccceeeeeeeccccc-EEEEEEecc
Confidence            34789999999999999999999999 888887665

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=94.56  E-value=0.091  Score=42.41  Aligned_cols=34  Identities=21%  Similarity=0.215  Sum_probs=29.2

Q ss_pred             eEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhh
Q 018529          172 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR  206 (354)
Q Consensus       172 ~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~  206 (354)
                      +.||+|+ +++|.+.+..+...|+ +|+.++++.++
T Consensus         3 vAlVTGas~GIG~aia~~la~~G~-~Vvi~~r~~~~   37 (266)
T d1mxha_           3 AAVITGGARRIGHSIAVRLHQQGF-RVVVHYRHSEG   37 (266)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCchH
Confidence            5688887 8999999999999999 89999887654

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=94.54  E-value=0.1  Score=39.75  Aligned_cols=90  Identities=19%  Similarity=0.217  Sum_probs=61.8

Q ss_pred             CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcc
Q 018529          168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  247 (354)
Q Consensus       168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~  247 (354)
                      -.+.++.|+|.|.+|...+++++.+|. +|++.++...+... ...+...    .  +  +.+.+++     .|+|..++
T Consensus        42 l~~k~vgiiG~G~IG~~va~~~~~fg~-~v~~~d~~~~~~~~-~~~~~~~----~--~--l~ell~~-----sDiv~~~~  106 (184)
T d1ygya1          42 IFGKTVGVVGLGRIGQLVAQRIAAFGA-YVVAYDPYVSPARA-AQLGIEL----L--S--LDDLLAR-----ADFISVHL  106 (184)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECTTSCHHHH-HHHTCEE----C--C--HHHHHHH-----CSEEEECC
T ss_pred             ccceeeeeccccchhHHHHHHhhhccc-eEEeecCCCChhHH-hhcCcee----c--c--HHHHHhh-----CCEEEEcC
Confidence            457899999999999999999999999 99999876554433 3344321    1  1  4444443     69998876


Q ss_pred             cChH----hH-HHHHHHhhCCCceEEEEcCC
Q 018529          248 GNID----NM-ISAFECVHDGWGVAVLVGVP  273 (354)
Q Consensus       248 g~~~----~~-~~~~~~l~~~~g~~v~~g~~  273 (354)
                      +-.+    .+ ...++.|+++ ..++.++..
T Consensus       107 Plt~~T~~lin~~~l~~mk~~-a~lIN~sRG  136 (184)
T d1ygya1         107 PKTPETAGLIDKEALAKTKPG-VIIVNAARG  136 (184)
T ss_dssp             CCSTTTTTCBCHHHHTTSCTT-EEEEECSCT
T ss_pred             CCCchhhhhhhHHHHhhhCCC-ceEEEecch
Confidence            5322    22 3667778886 777777654

>d1uira_ c.66.1.17 (A:) Spermidine synthase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thermus thermophilus [TaxId: 274]

Probab=94.45  E-value=0.076  Score=44.24  Aligned_cols=96  Identities=19%  Similarity=0.198  Sum_probs=64.8

Q ss_pred             CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcC------C---c--eEEcCCCCChhHHHHHHHHc
Q 018529          168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG------V---T--DFVNTSEHDRPIQEVIAEMT  236 (354)
Q Consensus       168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg------~---~--~v~~~~~~~~~~~~~i~~~~  236 (354)
                      ...++|||+|+|. |..+..+++.....+|.+++.+++-.+.++++-      .   .  .++. .    +..+.+++ +
T Consensus        76 ~~pk~VLiiG~G~-G~~~~~ll~~~~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~d~rv~i~~-~----Da~~~l~~-~  148 (312)
T d1uira_          76 PEPKRVLIVGGGE-GATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVI-D----DARAYLER-T  148 (312)
T ss_dssp             SCCCEEEEEECTT-SHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEE-S----CHHHHHHH-C
T ss_pred             CCcceEEEeCCCc-hHHHHHHHhcCCcceEEEecCCHHHHHHHHhcCcccccCccCCCceEEEE-c----hHHHHhhh-c
Confidence            4467999998764 556667777766669999999999888887631      1   1  1221 1    25566655 3


Q ss_pred             CCCccEEE-Ecc---c---------ChHhHHHHHHHhhCCCceEEEEc
Q 018529          237 NGGVDRSV-ECT---G---------NIDNMISAFECVHDGWGVAVLVG  271 (354)
Q Consensus       237 ~~~~dvv~-d~~---g---------~~~~~~~~~~~l~~~~g~~v~~g  271 (354)
                      ++.+|+|| |..   +         +.+.++.+.++|+++ |.++.-.
T Consensus       149 ~~~yDvIi~D~~dp~~~~~~~~~L~t~eF~~~~~~~L~p~-Gvlv~~~  195 (312)
T d1uira_         149 EERYDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPG-GVMGMQT  195 (312)
T ss_dssp             CCCEEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEE-EEEEEEE
T ss_pred             CCcccEEEEeCCCcccccchhhhhhhHHHHHHHHHhcCCC-ceEEEec
Confidence            44899997 441   2         135678899999998 9887643

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.44  E-value=0.092  Score=44.31  Aligned_cols=31  Identities=23%  Similarity=0.157  Sum_probs=26.7

Q ss_pred             CeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcC
Q 018529          171 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR  202 (354)
Q Consensus       171 ~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~  202 (354)
                      +.|||+|+ |-+|...+..+...|. .|+++++
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~-~V~~~d~   33 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGY-DCVVADN   33 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEEC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcC-eEEEEEC
Confidence            57899987 9999999998888898 8888854

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=94.44  E-value=0.23  Score=32.61  Aligned_cols=67  Identities=21%  Similarity=0.318  Sum_probs=47.1

Q ss_pred             eEEEEcCChhHHHH-HHHHHHcCCcEEEEEcCCh-hhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcccC
Q 018529          172 SVAVFGLGAVGLAA-AEGARIAGASRIIGVDRSS-KRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN  249 (354)
Q Consensus       172 ~vlI~G~g~~G~~a-~~~a~~~g~~~vi~v~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~  249 (354)
                      +|-++|-|++|+.+ +++++..|+ .|.+.|..+ +..+.|+++|+.........+  +         .++|+|+-+.+-
T Consensus         3 ~ihfiGIgG~GMs~LA~~L~~~G~-~VsGSD~~~~~~t~~L~~~Gi~i~~gh~~~~--i---------~~~d~vV~SsAI   70 (89)
T d1j6ua1           3 KIHFVGIGGIGMSAVALHEFSNGN-DVYGSNIEETERTAYLRKLGIPIFVPHSADN--W---------YDPDLVIKTPAV   70 (89)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEECSSCCHHHHHHHHTTCCEESSCCTTS--C---------CCCSEEEECTTC
T ss_pred             EEEEEeECHHHHHHHHHHHHhCCC-eEEEEeCCCChhHHHHHHCCCeEEeeecccc--c---------CCCCEEEEecCc
Confidence            56677988888865 688889999 999999876 456678899986433322221  1         257888877654


Q ss_pred             h
Q 018529          250 I  250 (354)
Q Consensus       250 ~  250 (354)
                      +
T Consensus        71 ~   71 (89)
T d1j6ua1          71 R   71 (89)
T ss_dssp             C
T ss_pred             C
Confidence            3

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=94.44  E-value=0.019  Score=47.50  Aligned_cols=34  Identities=35%  Similarity=0.473  Sum_probs=30.5

Q ss_pred             CCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCCh
Q 018529          170 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  204 (354)
Q Consensus       170 ~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~  204 (354)
                      +++|+|+|+|+.|+.|+..+...|. +|++++.++
T Consensus         1 ~KkV~IIGaG~aGL~aA~~La~~G~-~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIGAGVSGLAAAYKLKIHGL-NVTVFEAEG   34 (373)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHTTSC-EEEEECSSS
T ss_pred             CCEEEEECcCHHHHHHHHHHHhCCC-CEEEEeCCC
Confidence            5789999999999999999999999 899998653

>d1iy9a_ c.66.1.17 (A:) Spermidine synthase {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Bacillus subtilis [TaxId: 1423]

Probab=94.40  E-value=0.039  Score=45.19  Aligned_cols=98  Identities=19%  Similarity=0.105  Sum_probs=66.3

Q ss_pred             CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcC-----C---ceEEcCCCCChhHHHHHHHHcCCC
Q 018529          168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG-----V---TDFVNTSEHDRPIQEVIAEMTNGG  239 (354)
Q Consensus       168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg-----~---~~v~~~~~~~~~~~~~i~~~~~~~  239 (354)
                      ...++|||+|+|. |..+..+++..+..+|.+++.+++-.+.++++-     +   .++-....   +..+.+++. ...
T Consensus        74 ~~p~~vLiiGgG~-G~~~~~~l~~~~~~~i~~VEID~~Vi~~a~~~~~~~~~~~~d~r~~i~~~---D~~~~l~~~-~~~  148 (274)
T d1iy9a_          74 PNPEHVLVVGGGD-GGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVD---DGFMHIAKS-ENQ  148 (274)
T ss_dssp             SSCCEEEEESCTT-CHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEES---CSHHHHHTC-CSC
T ss_pred             CCcceEEecCCCC-cHHHHHHHhcCCcceEEEecCCHHHHHHHHHhChhhcccccCCCeEEEec---hHHHHHhhc-CCC
Confidence            4568999998765 555667777777779999999999888887742     1   11111111   134445543 348


Q ss_pred             ccEEE-Eccc---------ChHhHHHHHHHhhCCCceEEEEc
Q 018529          240 VDRSV-ECTG---------NIDNMISAFECVHDGWGVAVLVG  271 (354)
Q Consensus       240 ~dvv~-d~~g---------~~~~~~~~~~~l~~~~g~~v~~g  271 (354)
                      +|+|+ |...         +.+.++.+.++|+++ |.++.-.
T Consensus       149 yDvIi~D~~~p~~~~~~L~t~eFy~~~~~~L~~~-Gv~v~q~  189 (274)
T d1iy9a_         149 YDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKED-GIFVAQT  189 (274)
T ss_dssp             EEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEE-EEEEEEC
T ss_pred             CCEEEEcCCCCCCcchhhccHHHHHHHHhhcCCC-ceEEEec
Confidence            99997 4322         336788999999998 9988764

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=94.34  E-value=0.28  Score=36.76  Aligned_cols=44  Identities=14%  Similarity=0.229  Sum_probs=37.3

Q ss_pred             CeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCC
Q 018529          171 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV  215 (354)
Q Consensus       171 ~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~  215 (354)
                      .+|-++|.|.||...+.-+...|. .|++.++++++.+.+.+.++
T Consensus         3 ~nIg~IGlG~MG~~mA~~L~~~G~-~V~v~dr~~~~~~~l~~~~~   46 (176)
T d2pgda2           3 ADIALIGLAVMGQNLILNMNDHGF-VVCAFNRTVSKVDDFLANEA   46 (176)
T ss_dssp             BSEEEECCSHHHHHHHHHHHHTTC-CEEEECSSTHHHHHHHHTTT
T ss_pred             CcEEEEeEhHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHhcc
Confidence            468899999999998888888898 89999999999888766543

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=94.34  E-value=0.077  Score=41.08  Aligned_cols=87  Identities=18%  Similarity=0.254  Sum_probs=57.7

Q ss_pred             CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEccc
Q 018529          169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  248 (354)
Q Consensus       169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g  248 (354)
                      .|.+|.|+|.|.+|...+++++.+|. +|++.++...+..   ....    ...    ++.+.+++     .|+|.-++.
T Consensus        44 ~~ktvgIiG~G~IG~~va~~l~~fg~-~v~~~d~~~~~~~---~~~~----~~~----~l~~l~~~-----~D~v~~~~p  106 (199)
T d1dxya1          44 GQQTVGVMGTGHIGQVAIKLFKGFGA-KVIAYDPYPMKGD---HPDF----DYV----SLEDLFKQ-----SDVIDLHVP  106 (199)
T ss_dssp             GGSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCSSC---CTTC----EEC----CHHHHHHH-----CSEEEECCC
T ss_pred             cceeeeeeecccccccccccccccce-eeeccCCccchhh---hcch----hHH----HHHHHHHh-----cccceeeec
Confidence            46899999999999999999999999 9999987543210   0011    111    14443333     688887664


Q ss_pred             ChH-----hHHHHHHHhhCCCceEEEEcCC
Q 018529          249 NID-----NMISAFECVHDGWGVAVLVGVP  273 (354)
Q Consensus       249 ~~~-----~~~~~~~~l~~~~g~~v~~g~~  273 (354)
                      ..+     .-...++.|+++ ..++.++..
T Consensus       107 lt~~T~~li~~~~l~~mk~~-a~lIN~aRG  135 (199)
T d1dxya1         107 GIEQNTHIINEAAFNLMKPG-AIVINTARP  135 (199)
T ss_dssp             CCGGGTTSBCHHHHHHSCTT-EEEEECSCT
T ss_pred             ccccccccccHHHhhccCCc-eEEEecccH
Confidence            322     134677888886 777777653

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=94.30  E-value=0.089  Score=40.39  Aligned_cols=91  Identities=12%  Similarity=0.158  Sum_probs=60.2

Q ss_pred             CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEccc
Q 018529          169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  248 (354)
Q Consensus       169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g  248 (354)
                      .|.++.|+|.|.+|...+++++.+|. +|++.++...........+...   ..+    +.+.+++     .|+|..+.+
T Consensus        46 ~g~tvgIiG~G~IG~~va~~l~~fg~-~v~~~d~~~~~~~~~~~~~~~~---~~~----l~~ll~~-----sD~v~l~~p  112 (191)
T d1gdha1          46 DNKTLGIYGFGSIGQALAKRAQGFDM-DIDYFDTHRASSSDEASYQATF---HDS----LDSLLSV-----SQFFSLNAP  112 (191)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSCCCHHHHHHHTCEE---CSS----HHHHHHH-----CSEEEECCC
T ss_pred             cccceEEeecccchHHHHHHHHhhcc-ccccccccccccchhhcccccc---cCC----HHHHHhh-----CCeEEecCC
Confidence            47999999999999999999999999 8999887654433333333211   111    4444443     588887654


Q ss_pred             Ch-H---h-HHHHHHHhhCCCceEEEEcCC
Q 018529          249 NI-D---N-MISAFECVHDGWGVAVLVGVP  273 (354)
Q Consensus       249 ~~-~---~-~~~~~~~l~~~~g~~v~~g~~  273 (354)
                      -. +   . =...++.|+++ ..+|.++..
T Consensus       113 lt~~T~~li~~~~l~~mk~~-a~lIN~sRG  141 (191)
T d1gdha1         113 STPETRYFFNKATIKSLPQG-AIVVNTARG  141 (191)
T ss_dssp             CCTTTTTCBSHHHHTTSCTT-EEEEECSCG
T ss_pred             CCchHhheecHHHhhCcCCc-cEEEecCCc
Confidence            31 1   2 23677788886 777776543

>d1inla_ c.66.1.17 (A:) Spermidine synthase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thermotoga maritima [TaxId: 2336]

Probab=94.29  E-value=0.082  Score=43.57  Aligned_cols=99  Identities=14%  Similarity=0.119  Sum_probs=65.1

Q ss_pred             CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCC--------ceEEcCCCCChhHHHHHHHHcCCC
Q 018529          168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV--------TDFVNTSEHDRPIQEVIAEMTNGG  239 (354)
Q Consensus       168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~--------~~v~~~~~~~~~~~~~i~~~~~~~  239 (354)
                      ...++|||+|+|. |..+-.+++..+..+|.+++.+++-.+.++++-.        .++-... .  +..+.+++ +.+.
T Consensus        88 ~~pk~VLiiGgG~-G~~~r~~l~~~~~~~i~~VEIDp~Vi~~a~~~~~~~~~~~~d~rv~v~~-~--Da~~~l~~-~~~~  162 (295)
T d1inla_          88 PNPKKVLIIGGGD-GGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVI-A--NGAEYVRK-FKNE  162 (295)
T ss_dssp             SSCCEEEEEECTT-CHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEE-S--CHHHHGGG-CSSC
T ss_pred             CCCceEEEecCCc-hHHHHHHHhcCCCceEEEecCCHHHHHHHHHHHHhhcccccCCCcEEEh-h--hHHHHHhc-CCCC
Confidence            3458999998754 4456677777776699999999998888877421        1111111 1  24555554 3348


Q ss_pred             ccEEE-Eccc----------ChHhHHHHHHHhhCCCceEEEEcC
Q 018529          240 VDRSV-ECTG----------NIDNMISAFECVHDGWGVAVLVGV  272 (354)
Q Consensus       240 ~dvv~-d~~g----------~~~~~~~~~~~l~~~~g~~v~~g~  272 (354)
                      +|+|+ |+..          +.+.++.+.++|+++ |.++.-..
T Consensus       163 yDvIi~D~~dp~~~~~~~L~t~efy~~~~~~L~~~-Gi~v~q~~  205 (295)
T d1inla_         163 FDVIIIDSTDPTAGQGGHLFTEEFYQACYDALKED-GVFSAETE  205 (295)
T ss_dssp             EEEEEEEC----------CCSHHHHHHHHHHEEEE-EEEEEECC
T ss_pred             CCEEEEcCCCCCcCchhhhccHHHHHHHHhhcCCC-cEEEEecC
Confidence            99997 4321          235788999999998 99887654

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=94.27  E-value=0.052  Score=45.78  Aligned_cols=72  Identities=17%  Similarity=0.198  Sum_probs=44.0

Q ss_pred             eEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcC----ChhhHHHHHh---cCCceE-EcCCCCChhHHHHHHHHcCCCccE
Q 018529          172 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDR----SSKRFEEAKK---FGVTDF-VNTSEHDRPIQEVIAEMTNGGVDR  242 (354)
Q Consensus       172 ~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~----~~~~~~~~~~---lg~~~v-~~~~~~~~~~~~~i~~~~~~~~dv  242 (354)
                      +|||+|+ |-+|...+..+...|. .|+++++    ..+.....+.   -++..+ .|..+. ..+.+.+++   .++|+
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~g~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~-~~l~~~~~~---~~~d~   76 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQNGH-DVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNE-ALMTEILHD---HAIDT   76 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCH-HHHHHHHHH---TTCSE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcC-EEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCH-HHHHHHHhc---cCCCE
Confidence            5899987 9999999999999998 8888864    2222333222   233322 122221 123333332   27999


Q ss_pred             EEEccc
Q 018529          243 SVECTG  248 (354)
Q Consensus       243 v~d~~g  248 (354)
                      ||.+++
T Consensus        77 ViHlAa   82 (338)
T d1udca_          77 VIHFAG   82 (338)
T ss_dssp             EEECCS
T ss_pred             EEECCC
Confidence            999875

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.24  E-value=0.017  Score=46.17  Aligned_cols=75  Identities=23%  Similarity=0.309  Sum_probs=46.1

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCC-cEEEEEcCChhhHHHHHhcCCceE-EcCCCCChhHHHHHHHHcCCCccEEEE
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHDRPIQEVIAEMTNGGVDRSVE  245 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~-~~vi~v~~~~~~~~~~~~lg~~~v-~~~~~~~~~~~~~i~~~~~~~~dvv~d  245 (354)
                      .+.+|||+|+ |.+|...++.+...|. ++|++++|++.+...-..-..... .|..+    . +.+.+.. .++|+++.
T Consensus        13 ~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~~~~i~~~~~D~~~----~-~~~~~~~-~~~d~vi~   86 (232)
T d2bkaa1          13 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEK----L-DDYASAF-QGHDVGFC   86 (232)
T ss_dssp             TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGG----G-GGGGGGG-SSCSEEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccccceeeeeeecccc----c-ccccccc-cccccccc
Confidence            3468999998 9999999988887774 489999886544322111122222 22221    1 1222222 26899999


Q ss_pred             cccC
Q 018529          246 CTGN  249 (354)
Q Consensus       246 ~~g~  249 (354)
                      ++|.
T Consensus        87 ~~~~   90 (232)
T d2bkaa1          87 CLGT   90 (232)
T ss_dssp             CCCC
T ss_pred             cccc
Confidence            9875

>d1obfo1 c.2.1.3 (O:1-152,O:315-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Achromobacter xylosoxidans [TaxId: 85698]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Achromobacter xylosoxidans [TaxId: 85698]

Probab=94.21  E-value=0.22  Score=37.30  Aligned_cols=97  Identities=23%  Similarity=0.354  Sum_probs=60.0

Q ss_pred             eEEEEcCChhHHHHHHHHHHcCCc---EEEEEc--CChhhHHHHHhcC-------Cc-------------eEEcCCCCCh
Q 018529          172 SVAVFGLGAVGLAAAEGARIAGAS---RIIGVD--RSSKRFEEAKKFG-------VT-------------DFVNTSEHDR  226 (354)
Q Consensus       172 ~vlI~G~g~~G~~a~~~a~~~g~~---~vi~v~--~~~~~~~~~~~lg-------~~-------------~v~~~~~~~~  226 (354)
                      +|.|.|-|-+|.+....+...+..   .|+++.  .+.+...++-++.       ..             .+..+...+ 
T Consensus         3 kigINGfGRIGR~v~R~~~~~~~~~~~~vvaINd~~~~~~~ayLlkyDS~hG~~~~~v~~~~~~l~i~g~~i~i~~~~~-   81 (173)
T d1obfo1           3 RVAINGYGRIGRNILRAHYEGGKSHDIEIVAINDLGDPKTNAHLTRYDTAHGKFPGTVSVNGSYMVVNGDKIRVDANRN-   81 (173)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTSCSSEEEEEEECSSCHHHHHHHHHEETTTEECSSCEEEETTEEEETTEEEEEECCSC-
T ss_pred             EEEEECCcHHHHHHHHHHHhCCCCCCeEEEEEcCCCChHHHHHhhcccccCCCcCceEEeccceEEECCEEEEEEecCC-
Confidence            578889999999988877643221   566664  3445555554321       11             011111111 


Q ss_pred             hHHHHHHHHcCC--CccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCC
Q 018529          227 PIQEVIAEMTNG--GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSK  275 (354)
Q Consensus       227 ~~~~~i~~~~~~--~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~  275 (354)
                           ..++..+  ++|+|+||+|.-...+.+...|..+ .+-|++..+..
T Consensus        82 -----p~~i~W~~~gvDiViEcTG~f~~~~~a~~hl~~G-akkViiSAP~~  126 (173)
T d1obfo1          82 -----PAQLPWGALKVDVVLECTGFFTTKEKAGAHIKGG-AKKVIISAPGG  126 (173)
T ss_dssp             -----GGGSCTTTTTCSEEEECSSSCCSHHHHHHHHHHT-CSEEEESSCCC
T ss_pred             -----HHHCcccccccceEEEecccccCHHHHHHHhccC-CcceEEecCCC
Confidence                 2223333  8999999999877778888899886 77777776553

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=94.17  E-value=0.33  Score=35.27  Aligned_cols=80  Identities=16%  Similarity=0.085  Sum_probs=54.6

Q ss_pred             CeEEEEc-CChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC--CccEEEEcc
Q 018529          171 SSVAVFG-LGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG--GVDRSVECT  247 (354)
Q Consensus       171 ~~vlI~G-~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~--~~dvv~d~~  247 (354)
                      ++|.|+| .|.+|...+..++..|+ .|.+.+++++........+++.++...... ...+.+.+....  .=.+++|+.
T Consensus        10 ~kI~iIGg~G~mG~~la~~L~~~G~-~V~~~d~~~~~~~~~~~~~~~~v~~~~~~~-~~~~v~~~~~~~~~~~~iiiD~~   87 (152)
T d2pv7a2          10 HKIVIVGGYGKLGGLFARYLRASGY-PISILDREDWAVAESILANADVVIVSVPIN-LTLETIERLKPYLTENMLLADLT   87 (152)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHTTTC-CEEEECTTCGGGHHHHHTTCSEEEECSCGG-GHHHHHHHHGGGCCTTSEEEECC
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHcCC-CcEecccccccccchhhhhccccccccchh-hheeeeecccccccCCceEEEec
Confidence            5899999 59999999999999999 899999988776665556776666554432 233334443322  224778877


Q ss_pred             cChHh
Q 018529          248 GNIDN  252 (354)
Q Consensus       248 g~~~~  252 (354)
                      .....
T Consensus        88 Svk~~   92 (152)
T d2pv7a2          88 SVKRE   92 (152)
T ss_dssp             SCCHH
T ss_pred             ccCHH
Confidence            65433

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=94.16  E-value=0.052  Score=38.44  Aligned_cols=40  Identities=28%  Similarity=0.355  Sum_probs=33.5

Q ss_pred             hcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCCh
Q 018529          164 VAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  204 (354)
Q Consensus       164 ~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~  204 (354)
                      ...-.++++|+|+|+|.+|+-+++.+..+|. +|..+++.+
T Consensus        24 ~~~~~~~k~vvViGgG~iG~E~A~~l~~~g~-~Vtlie~~~   63 (123)
T d1nhpa2          24 KTVDPEVNNVVVIGSGYIGIEAAEAFAKAGK-KVTVIDILD   63 (123)
T ss_dssp             HHTCTTCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSS
T ss_pred             HhhccCCCEEEEECChHHHHHHHHHhhccce-EEEEEEecC
Confidence            3344567899999999999999999999999 888887654

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=94.13  E-value=0.11  Score=43.34  Aligned_cols=101  Identities=12%  Similarity=0.100  Sum_probs=63.4

Q ss_pred             cCCCCCCeEEEEcC--ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh------cCCceEEcCCCCChhHHHHHHHHc
Q 018529          165 AKPERGSSVAVFGL--GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK------FGVTDFVNTSEHDRPIQEVIAEMT  236 (354)
Q Consensus       165 ~~~~~~~~vlI~G~--g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~------lg~~~v~~~~~~~~~~~~~i~~~~  236 (354)
                      ..+.+|++||=..+  |++++   .++ ..|+..|++++.++...+++++      ++.+.+-... .+  ..+.++...
T Consensus       140 ~~~~~g~~VLdlf~~~G~~sl---~aa-~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~-~d--~~~~l~~~~  212 (317)
T d2b78a2         140 NGSAAGKTVLNLFSYTAAFSV---AAA-MGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVV-MD--VFDYFKYAR  212 (317)
T ss_dssp             HTTTBTCEEEEETCTTTHHHH---HHH-HTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEE-SC--HHHHHHHHH
T ss_pred             HHhhCCCceeecCCCCcHHHH---HHH-hCCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEEE-cc--HHHHHHHHH
Confidence            45778999998754  55553   333 4677789999999998888764      2222221111 12  444444432


Q ss_pred             -CC-CccEEEEcccC---------------hHhHHHHHHHhhCCCceEEEEcCC
Q 018529          237 -NG-GVDRSVECTGN---------------IDNMISAFECVHDGWGVAVLVGVP  273 (354)
Q Consensus       237 -~~-~~dvv~d~~g~---------------~~~~~~~~~~l~~~~g~~v~~g~~  273 (354)
                       .+ .||+|+---+.               .+++..+.++|+++ |.++++...
T Consensus       213 ~~~~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~L~~~a~~ll~pg-G~l~~~scs  265 (317)
T d2b78a2         213 RHHLTYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSEN-GLIIASTNA  265 (317)
T ss_dssp             HTTCCEEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEE-EEEEEEECC
T ss_pred             hhcCCCCEEEEcChhhccchhHHHHHHHHHHHHHHHHHHHcCCC-CEEEEEeCC
Confidence             23 79999852211               14677788999997 998887654

>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Arginine methyltransferase, HMT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.12  E-value=0.021  Score=48.30  Aligned_cols=94  Identities=23%  Similarity=0.272  Sum_probs=53.8

Q ss_pred             hcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH----HhcCCc-eE--EcCCCCChhHHHHHHHHc
Q 018529          164 VAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVT-DF--VNTSEHDRPIQEVIAEMT  236 (354)
Q Consensus       164 ~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~----~~lg~~-~v--~~~~~~~~~~~~~i~~~~  236 (354)
                      ...+.+|++||-+|+|. |.+++.+|+ .|+++|++++.++ ..+.+    ++.+.. .+  +...-.+  +     .+.
T Consensus        33 ~~~~~~~~~VLDlGcGt-G~ls~~aa~-~Ga~~V~avd~s~-~~~~a~~~~~~~~~~~~i~~i~~~~~~--l-----~~~  102 (328)
T d1g6q1_          33 NKDLFKDKIVLDVGCGT-GILSMFAAK-HGAKHVIGVDMSS-IIEMAKELVELNGFSDKITLLRGKLED--V-----HLP  102 (328)
T ss_dssp             HHHHHTTCEEEEETCTT-SHHHHHHHH-TCCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTT--S-----CCS
T ss_pred             ccccCCcCEEEEeCCCC-CHHHHHHHH-hCCCEEEEEeCCH-HHHHHHHHHHHhCccccceEEEeehhh--c-----cCc
Confidence            34456889999999874 666665554 6877999999885 33333    333432 22  2211111  1     112


Q ss_pred             CCCccEEEEcc-c----Ch----HhHHHHHHHhhCCCceEE
Q 018529          237 NGGVDRSVECT-G----NI----DNMISAFECVHDGWGVAV  268 (354)
Q Consensus       237 ~~~~dvv~d~~-g----~~----~~~~~~~~~l~~~~g~~v  268 (354)
                      ...+|+|+... +    ..    ..+....+.|+++ |+++
T Consensus       103 ~~~~D~i~se~~~~~~~~e~~~~~~~~a~~r~Lkpg-G~ii  142 (328)
T d1g6q1_         103 FPKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEG-GLIF  142 (328)
T ss_dssp             SSCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEE-EEEE
T ss_pred             ccceeEEEEEecceeeccchhHHHHHHHHHhccCCC-eEEE
Confidence            23799997632 1    11    2344445789997 8774

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=94.10  E-value=0.037  Score=47.78  Aligned_cols=31  Identities=35%  Similarity=0.321  Sum_probs=27.7

Q ss_pred             CCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEc
Q 018529          170 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVD  201 (354)
Q Consensus       170 ~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~  201 (354)
                      |.+|||+|+ |-+|...+..+...|. .|+++|
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~-~V~~iD   32 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNY-EVCIVD   32 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcC-EEEEEe
Confidence            679999997 9999999999999998 899986

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=94.09  E-value=0.023  Score=36.59  Aligned_cols=36  Identities=19%  Similarity=0.265  Sum_probs=31.1

Q ss_pred             CeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhH
Q 018529          171 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRF  207 (354)
Q Consensus       171 ~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~  207 (354)
                      ++|.|+|+|..|.+.++-|+.+|. ++.+.+.+++..
T Consensus         2 k~vgIlG~GQLgrMl~~Aa~~LG~-~v~vldp~~~~p   37 (78)
T d3etja2           2 KQVCVLGNGQLGRMLRQAGEPLGI-AVWPVGLDAEPA   37 (78)
T ss_dssp             EEEEEEBCSHHHHHHHHHHGGGTE-EEEEECTTSCGG
T ss_pred             CEEEEEcCCHHHHHHHHHHHHcCC-EEEEEcCCCCCc
Confidence            478999999999999999999999 888887765443

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=94.08  E-value=0.11  Score=42.52  Aligned_cols=75  Identities=17%  Similarity=0.192  Sum_probs=46.0

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChh-----hHH---HHHhcCCceEEcCCCCChhHHHHHHHHcCCC
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSK-----RFE---EAKKFGVTDFVNTSEHDRPIQEVIAEMTNGG  239 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~-----~~~---~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~  239 (354)
                      +..+|||+|+ |.+|...+..+...|. .|++++|+..     +.+   .+...++..+. .+-.+  . +.+.+... +
T Consensus         2 ~k~KILVtGatG~iG~~l~~~L~~~G~-~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~-~d~~d--~-~~~~~~~~-~   75 (312)
T d1qyda_           2 KKSRVLIVGGTGYIGKRIVNASISLGH-PTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIE-ASLDD--H-QRLVDALK-Q   75 (312)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHTTC-CEEEECCSCCSSCHHHHHHHHHHHTTTCEEEC-CCSSC--H-HHHHHHHT-T
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCC-EEEEEECCCcccchhHHHHHhhhccCCcEEEE-eeccc--c-hhhhhhcc-C
Confidence            4567999997 9999999998888998 8888877542     222   23344554332 21122  2 22333322 5


Q ss_pred             ccEEEEcccC
Q 018529          240 VDRSVECTGN  249 (354)
Q Consensus       240 ~dvv~d~~g~  249 (354)
                      .+.++.+.+.
T Consensus        76 ~~~~~~~~~~   85 (312)
T d1qyda_          76 VDVVISALAG   85 (312)
T ss_dssp             CSEEEECCCC
T ss_pred             cchhhhhhhh
Confidence            6788877653

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=94.05  E-value=0.069  Score=40.94  Aligned_cols=92  Identities=13%  Similarity=0.016  Sum_probs=62.0

Q ss_pred             CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcc
Q 018529          168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  247 (354)
Q Consensus       168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~  247 (354)
                      -.+.++.|+|.|.+|...+++++.+|. +|++.++........+..+....   .+    +.+.++     ..|+|.-+.
T Consensus        42 l~~~~vgiiG~G~IG~~va~~l~~fg~-~v~~~d~~~~~~~~~~~~~~~~~---~~----l~~~l~-----~sD~v~~~~  108 (188)
T d2naca1          42 LEAMHVGTVAAGRIGLAVLRRLAPFDV-HLHYTDRHRLPESVEKELNLTWH---AT----REDMYP-----VCDVVTLNC  108 (188)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHGGGTC-EEEEECSSCCCHHHHHHHTCEEC---SS----HHHHGG-----GCSEEEECS
T ss_pred             ccccceeeccccccchhhhhhhhccCc-eEEEEeecccccccccccccccc---CC----HHHHHH-----hccchhhcc
Confidence            357899999999999999999999999 89999887655555555554221   11    333222     368887765


Q ss_pred             cChH-----hHHHHHHHhhCCCceEEEEcCC
Q 018529          248 GNID-----NMISAFECVHDGWGVAVLVGVP  273 (354)
Q Consensus       248 g~~~-----~~~~~~~~l~~~~g~~v~~g~~  273 (354)
                      +-.+     .-...++.|+++ ..+|.++..
T Consensus       109 plt~~T~~li~~~~l~~mk~g-a~lIN~aRG  138 (188)
T d2naca1         109 PLHPETEHMINDETLKLFKRG-AYIVNTARG  138 (188)
T ss_dssp             CCCTTTTTCBSHHHHTTSCTT-EEEEECSCG
T ss_pred             cccccchhhhHHHHHHhCCCC-CEEEecCch
Confidence            4321     234667778776 677666543

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=94.04  E-value=0.15  Score=37.34  Aligned_cols=87  Identities=15%  Similarity=0.077  Sum_probs=51.9

Q ss_pred             eEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcccChH
Q 018529          172 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNID  251 (354)
Q Consensus       172 ~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~~~  251 (354)
                      +|-|+|.|.+|...+.-+...|. .|++.++..++....+..+.... +.      ..+.++     ..|+||-|+....
T Consensus         2 kIgiIG~G~mG~~ia~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~-~~------~~e~~~-----~~diIi~~v~~~~   68 (152)
T d1i36a2           2 RVGFIGFGEVAQTLASRLRSRGV-EVVTSLEGRSPSTIERARTVGVT-ET------SEEDVY-----SCPVVISAVTPGV   68 (152)
T ss_dssp             EEEEESCSHHHHHHHHHHHHTTC-EEEECCTTCCHHHHHHHHHHTCE-EC------CHHHHH-----TSSEEEECSCGGG
T ss_pred             EEEEEcHHHHHHHHHHHHHHCCC-eEEEEcCchhHHHHHhhhccccc-cc------HHHHHh-----hcCeEEEEecCch
Confidence            47788999999998888888898 78888777666555443333221 11      111111     3678887776655


Q ss_pred             hHHHHHHHhhCCCceEEEEc
Q 018529          252 NMISAFECVHDGWGVAVLVG  271 (354)
Q Consensus       252 ~~~~~~~~l~~~~g~~v~~g  271 (354)
                      ..+.+......-...++.++
T Consensus        69 ~~~~~~~~~~~~~~~~id~s   88 (152)
T d1i36a2          69 ALGAARRAGRHVRGIYVDIN   88 (152)
T ss_dssp             HHHHHHHHHTTCCSEEEECS
T ss_pred             HHHHHHhhcccCCceeeccC
Confidence            55554444333213344443

>d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermus aquaticus [TaxId: 271]

Probab=94.00  E-value=0.2  Score=37.36  Aligned_cols=96  Identities=21%  Similarity=0.298  Sum_probs=60.9

Q ss_pred             eEEEEcCChhHHHHHHHHHHcCCcEEEEEcC--ChhhHHHHHhc----CC---c-------------eEEcCCCCChhHH
Q 018529          172 SVAVFGLGAVGLAAAEGARIAGASRIIGVDR--SSKRFEEAKKF----GV---T-------------DFVNTSEHDRPIQ  229 (354)
Q Consensus       172 ~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~--~~~~~~~~~~l----g~---~-------------~v~~~~~~~~~~~  229 (354)
                      +|.|.|-|-+|.+..+.+...+. .|+++..  +.+...++-++    |.   .             .+..+.+.+    
T Consensus         2 kigINGfGRIGR~~~R~l~~~~i-~iv~INd~~~~~~~ayLl~yDS~hG~~~~~v~~~~~~l~i~g~~I~~~~~~~----   76 (168)
T d2g82a1           2 KVGINGFGRIGRQVFRILHSRGV-EVALINDLTDNKTLAHLLKYDSIYHRFPGEVAYDDQYLYVDGKAIRATAVKD----   76 (168)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHTC-CEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEECSSEEEETTEEEEEECCSS----
T ss_pred             EEEEECCcHHHHHHHHHHhcCCC-EEEEECCCcchhhhhheeecccccCccccccccccceeEecceeEEEEecCC----
Confidence            57899999999999998888888 6666633  23444444332    21   0             011111111    


Q ss_pred             HHHHHHcCC--CccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCC
Q 018529          230 EVIAEMTNG--GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSK  275 (354)
Q Consensus       230 ~~i~~~~~~--~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~  275 (354)
                        ..++.++  ++|+|+||+|.....+.+...+..+ .+-|++..+..
T Consensus        77 --p~~i~W~~~gvdiViEcTG~f~~~~~~~~hl~~g-akkViiSAP~k  121 (168)
T d2g82a1          77 --PKEIPWAEAGVGVVIESTGVFTDADKAKAHLEGG-AKKVIITAPAK  121 (168)
T ss_dssp             --GGGCCTGGGTEEEEEECSSSCCBHHHHTHHHHTT-CSEEEESSCCB
T ss_pred             --hHHCcccccCCceeEeccccccchHHhhhhhccc-cceeeeccccc
Confidence              1222323  8999999999877788888899886 66666665543

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=93.99  E-value=0.041  Score=46.92  Aligned_cols=32  Identities=25%  Similarity=0.279  Sum_probs=27.7

Q ss_pred             CeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCC
Q 018529          171 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRS  203 (354)
Q Consensus       171 ~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~  203 (354)
                      +.|||+|+ |-+|...+..+...|. .|+++++.
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~-~V~~~~r~   34 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGY-EVHGIKRR   34 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEECC-
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcC-EEEEEECC
Confidence            57899987 9999999998888898 99999874

>d2bhsa1 c.79.1.1 (A:2-293) O-acetylserine sulfhydrylase (Cysteine synthase) {Escherichia coli, isoform B (CysM) [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Escherichia coli, isoform B (CysM) [TaxId: 562]

Probab=93.96  E-value=0.56  Score=38.21  Aligned_cols=109  Identities=17%  Similarity=0.124  Sum_probs=68.4

Q ss_pred             hhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEc--CChhhHHHHHhcCCceEEcCCCCCh-------------
Q 018529          162 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVD--RSSKRFEEAKKFGVTDFVNTSEHDR-------------  226 (354)
Q Consensus       162 ~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~--~~~~~~~~~~~lg~~~v~~~~~~~~-------------  226 (354)
                      .+...++++..|+...+|..|.+.+..|+.+|.+-++.+.  .++.+.+.++.+|++.++...+.+.             
T Consensus        52 ~~~g~~~~~~~vv~aSsGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~v~~~~~~~~a~~~~~~~~~~  131 (292)
T d2bhsa1          52 EKRGEIKPGDVLIEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERRAAMRAYGAELILVTKEQGMEGARDLALEMANR  131 (292)
T ss_dssp             HHTTSCCTTSEEEEECCSHHHHHHHHHHHHHTCEEEEEEESCCCHHHHHHHHHTTCEEEEECTTTHHHHHHHHHHHHHHH
T ss_pred             HHhCCcCCCceeeeecccchhHHHHHHHHhcCcceEeeeccCchhhhhHHHHHhCCCcceeecccchHHHHHHHhhcccc
Confidence            3455567677666667799999999999999995444443  2667888899999975543322110             


Q ss_pred             --------------------hHHHHHHHHcCCCccEEEEcccChHhHHHHHHH---hhCCCceEEEEc
Q 018529          227 --------------------PIQEVIAEMTNGGVDRSVECTGNIDNMISAFEC---VHDGWGVAVLVG  271 (354)
Q Consensus       227 --------------------~~~~~i~~~~~~~~dvv~d~~g~~~~~~~~~~~---l~~~~g~~v~~g  271 (354)
                                          ....++.+..++.+|.++.++|+..++.-+.+.   +.+. .+++.+.
T Consensus       132 ~~~~~~~~~~~~~~~~~~~~~~a~Ei~~q~~~~~d~vv~~~G~Gg~~~G~~~~~k~~~~~-~~i~~Ve  198 (292)
T d2bhsa1         132 GEGKLLDQFNNPDNPYAHYTTTGPEIWQQTGGRITHFVSSMGTTGTITGVSRFMREQSKP-VTIVGLQ  198 (292)
T ss_dssp             TSSEECCTTTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHTSSSC-CEEEEEE
T ss_pred             ccccccCCCchhcchhhHHHHHHHHhHHhcCCCCCcccccCCCccchhhhhhhhhhccCc-ceEEEec
Confidence                                011223333334689999988875555544444   4454 5665554

>d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: mRNA cap (Guanine N-7) methyltransferase
domain: mRNA cap (Guanine N-7) methyltransferase
species: Fungus (Encephalitozoon cuniculi) [TaxId: 6035]

Probab=93.95  E-value=0.056  Score=43.55  Aligned_cols=97  Identities=19%  Similarity=0.154  Sum_probs=60.0

Q ss_pred             CCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCc-eEEcCCCCChhHHHHHHHH-cCCC
Q 018529          166 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT-DFVNTSEHDRPIQEVIAEM-TNGG  239 (354)
Q Consensus       166 ~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~-~v~~~~~~~~~~~~~i~~~-~~~~  239 (354)
                      -++++++||=+|||. |..+..+++. |...|+++|.+++..+.+++    .+.. .+... ..+  ..  -..+ .++.
T Consensus        21 ~~~~~~~VLDlGCG~-G~~~~~~~~~-~~~~v~GiD~S~~~l~~A~~r~~~~~~~~~v~f~-~~D--~~--~~~~~~~~~   93 (252)
T d1ri5a_          21 YTKRGDSVLDLGCGK-GGDLLKYERA-GIGEYYGVDIAEVSINDARVRARNMKRRFKVFFR-AQD--SY--GRHMDLGKE   93 (252)
T ss_dssp             HCCTTCEEEEETCTT-TTTHHHHHHH-TCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEE-ESC--TT--TSCCCCSSC
T ss_pred             hCCCcCEEEEecccC-cHHHHHHHHc-CCCeEEEecCCHHHHHHHHHHHHhcCCCcceEEE-Ecc--hh--hhccccccc
Confidence            357899999999875 5556677765 44489999999998887754    3332 22111 000  00  0001 1237


Q ss_pred             ccEEEEcccC------h----HhHHHHHHHhhCCCceEEEE
Q 018529          240 VDRSVECTGN------I----DNMISAFECVHDGWGVAVLV  270 (354)
Q Consensus       240 ~dvv~d~~g~------~----~~~~~~~~~l~~~~g~~v~~  270 (354)
                      ||+|+....-      .    ..+..+.+.|+++ |.++..
T Consensus        94 fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~Lk~g-G~~i~~  133 (252)
T d1ri5a_          94 FDVISSQFSFHYAFSTSESLDIAQRNIARHLRPG-GYFIMT  133 (252)
T ss_dssp             EEEEEEESCGGGGGSSHHHHHHHHHHHHHTEEEE-EEEEEE
T ss_pred             ceEEEEcceeeecCCCHHHHHHHHHHHhceeCCC-CEEEEE
Confidence            9999874332      1    2456677889997 988753

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=93.94  E-value=0.045  Score=38.51  Aligned_cols=36  Identities=19%  Similarity=0.282  Sum_probs=30.9

Q ss_pred             CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCCh
Q 018529          168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  204 (354)
Q Consensus       168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~  204 (354)
                      +..++++|+|+|.+|+-.++++..+|. .|..+.+.+
T Consensus        20 ~~p~~i~IiG~G~ig~E~A~~l~~~G~-~Vtiv~~~~   55 (119)
T d3lada2          20 NVPGKLGVIGAGVIGLELGSVWARLGA-EVTVLEAMD   55 (119)
T ss_dssp             SCCSEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSS
T ss_pred             cCCCeEEEECCChHHHHHHHHHHHcCC-ceEEEEeec
Confidence            345889999999999999999999999 788886554

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=93.83  E-value=0.051  Score=38.01  Aligned_cols=34  Identities=24%  Similarity=0.211  Sum_probs=30.6

Q ss_pred             CCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCCh
Q 018529          170 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  204 (354)
Q Consensus       170 ~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~  204 (354)
                      .++++|+|+|.+|+-+++.++.+|. +|..+.+.+
T Consensus        21 p~~vvIiGgG~ig~E~A~~l~~~G~-~Vtlve~~~   54 (116)
T d1gesa2          21 PERVAVVGAGYIGVELGGVINGLGA-KTHLFEMFD   54 (116)
T ss_dssp             CSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             CCEEEEECCChhhHHHHHHhhcccc-EEEEEeecc
Confidence            4789999999999999999999999 899997765

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=93.82  E-value=0.06  Score=40.82  Aligned_cols=48  Identities=17%  Similarity=0.200  Sum_probs=35.6

Q ss_pred             hhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH
Q 018529          161 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA  210 (354)
Q Consensus       161 l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~  210 (354)
                      +.+...--++++|||+|+|+++.+++..+...  ++|..+.|+.++.+.+
T Consensus         9 l~~~~~~~~~k~vlIlGaGG~arai~~aL~~~--~~i~I~nR~~~ka~~l   56 (177)
T d1nvta1           9 LEEEIGRVKDKNIVIYGAGGAARAVAFELAKD--NNIIIANRTVEKAEAL   56 (177)
T ss_dssp             HHHHHCCCCSCEEEEECCSHHHHHHHHHHTSS--SEEEEECSSHHHHHHH
T ss_pred             HHHhCCCcCCCEEEEECCcHHHHHHHHHHccc--cceeeehhhhhHHHHH
Confidence            33333335788999999999999877666443  3899999998887655

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=93.82  E-value=0.14  Score=36.32  Aligned_cols=72  Identities=11%  Similarity=0.233  Sum_probs=45.1

Q ss_pred             eEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcccCh
Q 018529          172 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI  250 (354)
Q Consensus       172 ~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~~  250 (354)
                      +|.|+|+ |-+|.+..+++...+..-+..++.+..           ..         +         ..+|+|+|++.. 
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~-----------~~---------~---------~~~DVvIDFS~p-   51 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGV-----------EE---------L---------DSPDVVIDFSSP-   51 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEE-----------EE---------C---------SCCSEEEECSCG-
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcH-----------HH---------h---------ccCCEEEEecCH-
Confidence            5889997 999999999999888844444432211           00         0         147888888755 


Q ss_pred             HhHHHHHHHhhCCCceEEEEcCCC
Q 018529          251 DNMISAFECVHDGWGVAVLVGVPS  274 (354)
Q Consensus       251 ~~~~~~~~~l~~~~g~~v~~g~~~  274 (354)
                      +.....++..... +.=+.+|++.
T Consensus        52 ~~~~~~l~~~~~~-~~p~ViGTTG   74 (128)
T d1vm6a3          52 EALPKTVDLCKKY-RAGLVLGTTA   74 (128)
T ss_dssp             GGHHHHHHHHHHH-TCEEEECCCS
T ss_pred             HHHHHHHHHHHhc-CCCEEEEcCC
Confidence            4444444444443 5555666654

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.81  E-value=0.051  Score=38.43  Aligned_cols=35  Identities=17%  Similarity=0.267  Sum_probs=30.9

Q ss_pred             CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCCh
Q 018529          169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  204 (354)
Q Consensus       169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~  204 (354)
                      ..++++|+|+|.+|+-+++++..+|. .|..+.+.+
T Consensus        22 ~p~~~vIiG~G~ig~E~A~~l~~lG~-~Vtii~~~~   56 (122)
T d1v59a2          22 IPKRLTIIGGGIIGLEMGSVYSRLGS-KVTVVEFQP   56 (122)
T ss_dssp             CCSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             CCCeEEEECCCchHHHHHHHHHhhCc-ceeEEEecc
Confidence            34799999999999999999999999 898887654

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=93.80  E-value=0.04  Score=43.85  Aligned_cols=37  Identities=24%  Similarity=0.257  Sum_probs=32.8

Q ss_pred             CCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCCh
Q 018529          167 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  204 (354)
Q Consensus       167 ~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~  204 (354)
                      -+.+++|+|+|+|+.|+.++..+...|. .|+.++.++
T Consensus        46 ~~~~k~VvIIGaGpAGl~aA~~l~~~G~-~v~l~E~~~   82 (233)
T d1djqa3          46 TKNKDSVLIVGAGPSGSEAARVLMESGY-TVHLTDTAE   82 (233)
T ss_dssp             CSSCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             ccCCceEEEEcccHHHHHHHHHHHHhcc-ceeeEeecc
Confidence            4678899999999999999999999999 899997655

>d1mjfa_ c.66.1.17 (A:) Putative spermidine synthetase PF0127 (SpeE) {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Putative spermidine synthetase PF0127 (SpeE)
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=93.72  E-value=0.11  Score=42.52  Aligned_cols=96  Identities=19%  Similarity=0.167  Sum_probs=61.6

Q ss_pred             CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCC--------------ceEEcCCCCChhHHHHHH
Q 018529          168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV--------------TDFVNTSEHDRPIQEVIA  233 (354)
Q Consensus       168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~--------------~~v~~~~~~~~~~~~~i~  233 (354)
                      ...++|||+|+|. |..+-.+++. +..+|.+++.+++-.+.++++-.              .++-... .  +..+.++
T Consensus        71 ~~p~~vLiiG~G~-G~~~~~~l~~-~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~~~~~~d~rv~i~~-~--Da~~~l~  145 (276)
T d1mjfa_          71 PKPKRVLVIGGGD-GGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTI-G--DGFEFIK  145 (276)
T ss_dssp             SCCCEEEEEECTT-SHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEE-S--CHHHHHH
T ss_pred             CCCceEEEecCCc-hHHHHHHHHh-CCceEEEecCCHHHHHHHHHhhhhccchhhhhhccCCCCceEEE-C--hHHHHHh
Confidence            5568999998754 3334445554 44589999999999888876421              1111111 1  1445555


Q ss_pred             HHcCCCccEEE-Eccc---------ChHhHHHHHHHhhCCCceEEEEc
Q 018529          234 EMTNGGVDRSV-ECTG---------NIDNMISAFECVHDGWGVAVLVG  271 (354)
Q Consensus       234 ~~~~~~~dvv~-d~~g---------~~~~~~~~~~~l~~~~g~~v~~g  271 (354)
                      +  .+++|+|+ |...         +.+.++.+.++|+++ |.++.-+
T Consensus       146 ~--~~~yDvIi~D~~~~~~~~~~L~t~eF~~~~~~~L~~~-Gv~v~q~  190 (276)
T d1mjfa_         146 N--NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNP-GIYVTQA  190 (276)
T ss_dssp             H--CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             c--cCCCCEEEEeCCCCCCCcccccCHHHHHhhHhhcCCC-ceEEEec
Confidence            3  35899997 4432         135788899999998 9887654

>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methyltransferase TTHA0928
species: Thermus thermophilus [TaxId: 274]

Probab=93.66  E-value=0.29  Score=36.53  Aligned_cols=95  Identities=20%  Similarity=0.145  Sum_probs=54.2

Q ss_pred             CCCCCCeEEEEcC--ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCc-eEEcCCCCChhHHHHHHHHcCC
Q 018529          166 KPERGSSVAVFGL--GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT-DFVNTSEHDRPIQEVIAEMTNG  238 (354)
Q Consensus       166 ~~~~~~~vlI~G~--g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~-~v~~~~~~~~~~~~~i~~~~~~  238 (354)
                      .+.+|.+||=.++  |.+|.   . |...|+ .|++++.+++..+.+++    +|.. .+.....+  .+... .....+
T Consensus        38 ~~~~g~~vLDl~~G~G~~~i---~-a~~~ga-~vv~vD~~~~a~~~~~~N~~~~~~~~~v~~~~~d--~~~~~-~~~~~~  109 (171)
T d1ws6a1          38 RYPRRGRFLDPFAGSGAVGL---E-AASEGW-EAVLVEKDPEAVRLLKENVRRTGLGARVVALPVE--VFLPE-AKAQGE  109 (171)
T ss_dssp             HCTTCCEEEEETCSSCHHHH---H-HHHTTC-EEEEECCCHHHHHHHHHHHHHHTCCCEEECSCHH--HHHHH-HHHTTC
T ss_pred             cccCCCeEEEeccccchhhh---h-hhhccc-hhhhcccCHHHHhhhhHHHHhhccccceeeeehh--ccccc-ccccCC
Confidence            5678889988765  55543   3 334688 78899999999888754    5553 34332221  12222 222233


Q ss_pred             CccEEEEc----ccChHhHHHHHH--HhhCCCceEEE
Q 018529          239 GVDRSVEC----TGNIDNMISAFE--CVHDGWGVAVL  269 (354)
Q Consensus       239 ~~dvv~d~----~g~~~~~~~~~~--~l~~~~g~~v~  269 (354)
                      .||+||--    .+-.+.+..++.  .++++ |.+++
T Consensus       110 ~fD~If~DPPY~~~~~~~l~~l~~~~ll~~~-g~ivi  145 (171)
T d1ws6a1         110 RFTVAFMAPPYAMDLAALFGELLASGLVEAG-GLYVL  145 (171)
T ss_dssp             CEEEEEECCCTTSCTTHHHHHHHHHTCEEEE-EEEEE
T ss_pred             ccceeEEccccccCHHHHHHHHHHcCCcCCC-eEEEE
Confidence            79999842    222234444443  36775 66553

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=93.60  E-value=0.088  Score=40.60  Aligned_cols=72  Identities=25%  Similarity=0.334  Sum_probs=46.7

Q ss_pred             hhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCC-ceEEcCCCCChhHHHHHHHHcCCCc
Q 018529          162 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV-TDFVNTSEHDRPIQEVIAEMTNGGV  240 (354)
Q Consensus       162 ~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~-~~v~~~~~~~~~~~~~i~~~~~~~~  240 (354)
                      ....++ .|++||=.|+|. |.+++. |...|+.+|++++.+++..+.+++.-. -.++.. +    +    .+ .++.|
T Consensus        42 ~~~~dl-~Gk~VLDlGcGt-G~l~i~-a~~~ga~~V~~vDid~~a~~~ar~N~~~~~~~~~-D----~----~~-l~~~f  108 (197)
T d1ne2a_          42 YNDGNI-GGRSVIDAGTGN-GILACG-SYLLGAESVTAFDIDPDAIETAKRNCGGVNFMVA-D----V----SE-ISGKY  108 (197)
T ss_dssp             HHHTSS-BTSEEEEETCTT-CHHHHH-HHHTTBSEEEEEESCHHHHHHHHHHCTTSEEEEC-C----G----GG-CCCCE
T ss_pred             HHcCCC-CCCEEEEeCCCC-cHHHHH-HHHcCCCcccccccCHHHHHHHHHccccccEEEE-e----h----hh-cCCcc
Confidence            344555 589999999864 555554 444677699999999999998887332 122221 1    1    11 23479


Q ss_pred             cEEEEc
Q 018529          241 DRSVEC  246 (354)
Q Consensus       241 dvv~d~  246 (354)
                      |+|+..
T Consensus       109 D~Vi~N  114 (197)
T d1ne2a_         109 DTWIMN  114 (197)
T ss_dssp             EEEEEC
T ss_pred             eEEEeC
Confidence            999854

>d1dssg1 c.2.1.3 (G:1-148,G:313-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {South China Sea lobster (Palinurus versicolor) [TaxId: 150436]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: South China Sea lobster (Palinurus versicolor) [TaxId: 150436]

Probab=93.58  E-value=0.18  Score=37.60  Aligned_cols=97  Identities=23%  Similarity=0.354  Sum_probs=62.8

Q ss_pred             eEEEEcCChhHHHHHHHHHHcCCcEEEEEcC---ChhhHHHHHhc----CC---ce-------EEc------CCCCChhH
Q 018529          172 SVAVFGLGAVGLAAAEGARIAGASRIIGVDR---SSKRFEEAKKF----GV---TD-------FVN------TSEHDRPI  228 (354)
Q Consensus       172 ~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~---~~~~~~~~~~l----g~---~~-------v~~------~~~~~~~~  228 (354)
                      +|.|.|-|-+|.+....+...+. .++++..   +.+...++-++    |.   +.       .++      +...+   
T Consensus         2 kIgINGfGRIGR~~~R~~~~~~~-~ivaINd~~~~~~~~~yLlkyDS~hG~~~~~i~~~~~~l~ing~~I~~~~~~~---   77 (169)
T d1dssg1           2 KIGINGFGRIGRLVLRAALEMGA-QVVAVNDPFIALEYMVYMFKYDSTHGMFKGEVKAEDGALVVDGKKITVFNEMK---   77 (169)
T ss_dssp             CEEEECCSHHHHHHHHHHHHHTC-CEEEEECTTSCHHHHHHHHHCCTTTCCCSSCEEEETTEEEETTEEEEEECCSS---
T ss_pred             eEEEECCcHHHHHHHHHHHhCCC-cEEEECCCCcCHHHHHHHHhcccccCCcCCeEEEeCCEEEECCEEEEEEecCC---
Confidence            57899999999999999988888 6666632   34556655442    21   00       111      11111   


Q ss_pred             HHHHHHHcCC--CccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCC
Q 018529          229 QEVIAEMTNG--GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD  276 (354)
Q Consensus       229 ~~~i~~~~~~--~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~  276 (354)
                         ..++..+  ++|+|+||+|.....+.+...+..+ .+-|++..+..+
T Consensus        78 ---p~~i~W~~~gvD~ViEcTG~f~~~~~~~~hl~~g-akkViisaP~~d  123 (169)
T d1dssg1          78 ---PENIPWSKAGAEYIVESTGVFTTIEKASAHFKGG-AKKVIISAPSAD  123 (169)
T ss_dssp             ---GGGCCHHHHTCCEEEECSSSCCSHHHHGGGGTTT-CSEEEESSCCSS
T ss_pred             ---hHHCCccccCCCEEEecCceEcCHHHHHHHHhcC-CceEeecCCccc
Confidence               1111112  7999999999877788888899886 777777766543

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=93.57  E-value=0.06  Score=38.68  Aligned_cols=39  Identities=23%  Similarity=0.269  Sum_probs=34.0

Q ss_pred             cCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCCh
Q 018529          165 AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  204 (354)
Q Consensus       165 ~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~  204 (354)
                      ..++++++++|+|+|.+|+-++..+...|. .|..+++.+
T Consensus        30 ~~~~~~k~v~VIGgG~iG~E~A~~l~~~g~-~Vtvie~~~   68 (133)
T d1q1ra2          30 RQLIADNRLVVIGGGYIGLEVAATAIKANM-HVTLLDTAA   68 (133)
T ss_dssp             HTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             HhhccCCEEEEECCchHHHHHHHHHHhhCc-ceeeeeecc
Confidence            345678999999999999999999999999 899997765

>d1u8fo1 c.2.1.3 (O:3-151,O:316-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Human(Homo sapiens), liver isoform [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Human(Homo sapiens), liver isoform [TaxId: 9606]

Probab=93.54  E-value=0.35  Score=35.96  Aligned_cols=98  Identities=27%  Similarity=0.401  Sum_probs=61.5

Q ss_pred             eEEEEcCChhHHHHHHHHHHcCCcEEEEEcC---ChhhHHHHHhc----CC---c------e-EEc------CCCCChhH
Q 018529          172 SVAVFGLGAVGLAAAEGARIAGASRIIGVDR---SSKRFEEAKKF----GV---T------D-FVN------TSEHDRPI  228 (354)
Q Consensus       172 ~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~---~~~~~~~~~~l----g~---~------~-v~~------~~~~~~~~  228 (354)
                      +|.|.|-|-+|.+....+....--.++++..   +.+...++-++    |.   +      . .++      +...+   
T Consensus         3 kIgINGFGRIGR~v~R~~~~~~~~~ivaINd~~~~~~~~ayLlkyDS~hG~~~~~v~~~~~~l~i~~~~I~~~~~~~---   79 (169)
T d1u8fo1           3 KVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAENGKLVINGNPITIFQERD---   79 (169)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHCSSEEEEEECSSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSS---
T ss_pred             EEEEECCcHHHHHHHHHHHHCCCcEEEEecCCCccHHHHHHHHhhccccCCcCCeEEEECCEEEECCEEEEEEECCC---
Confidence            6889999999999998777654226777733   34555555442    21   0      0 111      11111   


Q ss_pred             HHHHHHHcCC--CccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCC
Q 018529          229 QEVIAEMTNG--GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD  276 (354)
Q Consensus       229 ~~~i~~~~~~--~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~  276 (354)
                         ..++..+  ++|+|+||+|.....+.+...+..+ .+-|++..+..+
T Consensus        80 ---p~~i~W~~~~vDiViEcTG~f~~~~~~~~hl~~g-akkViiSaP~~d  125 (169)
T d1u8fo1          80 ---PSKIKWGDAGAEYVVESTGVFTTMEKAGAHLQGG-AKRVIISAPSAD  125 (169)
T ss_dssp             ---GGGCCTTTTTCCEEEECSSSCCSHHHHGGGGGGT-CSEEEESSCCSS
T ss_pred             ---hhhCCccccCCCEEEEecceeccHHHHHHHHhcC-CceEeecccccc
Confidence               2233333  8999999999877777888888886 666777665543

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=93.52  E-value=0.025  Score=41.83  Aligned_cols=85  Identities=12%  Similarity=-0.063  Sum_probs=50.9

Q ss_pred             EEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcccChHhH
Q 018529          174 AVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNM  253 (354)
Q Consensus       174 lI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~~~~~  253 (354)
                      -++|+|.+|...+..++. +...+.+..|+.++.+.+.+.+.....+..+.-            ...|+||-|+.. +.+
T Consensus         3 gfIG~G~mg~~l~~~L~~-~~~~~~v~~R~~~~~~~l~~~~~~~~~~~~~~~------------~~~DiVil~v~d-~~i   68 (153)
T d2i76a2           3 NFVGTGTLTRFFLECLKD-RYEIGYILSRSIDRARNLAEVYGGKAATLEKHP------------ELNGVVFVIVPD-RYI   68 (153)
T ss_dssp             EEESCCHHHHHHHHTTC-----CCCEECSSHHHHHHHHHHTCCCCCSSCCCC------------C---CEEECSCT-TTH
T ss_pred             EEEeCcHHHHHHHHHHHh-CCCEEEEEeCChhhhcchhhcccccccchhhhh------------ccCcEEEEeccc-hhh
Confidence            467999999987776544 332445678999998888776554332222210            247999999976 667


Q ss_pred             HHHHHHhhCCCceEEEEcC
Q 018529          254 ISAFECVHDGWGVAVLVGV  272 (354)
Q Consensus       254 ~~~~~~l~~~~g~~v~~g~  272 (354)
                      ......++.....++.+..
T Consensus        69 ~~v~~~l~~~~~ivi~~s~   87 (153)
T d2i76a2          69 KTVANHLNLGDAVLVHCSG   87 (153)
T ss_dssp             HHHHTTTCCSSCCEEECCS
T ss_pred             hHHHhhhcccceeeeeccc
Confidence            7777777654144454543

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=93.49  E-value=0.04  Score=39.05  Aligned_cols=36  Identities=25%  Similarity=0.298  Sum_probs=32.0

Q ss_pred             CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCCh
Q 018529          168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  204 (354)
Q Consensus       168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~  204 (354)
                      +..++++|+|+|.+|+-++++...+|. +|..+.+++
T Consensus        23 ~~p~~~viiG~G~iglE~A~~~~~~G~-~Vtvi~~~~   58 (123)
T d1dxla2          23 EIPKKLVVIGAGYIGLEMGSVWGRIGS-EVTVVEFAS   58 (123)
T ss_dssp             SCCSEEEESCCSHHHHHHHHHHHHHTC-EEEEECSSS
T ss_pred             ccCCeEEEEccchHHHHHHHHHHhcCC-eEEEEEEcc
Confidence            345899999999999999999999999 999997765

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=93.49  E-value=0.13  Score=42.94  Aligned_cols=32  Identities=22%  Similarity=0.185  Sum_probs=28.7

Q ss_pred             CeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCC
Q 018529          171 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRS  203 (354)
Q Consensus       171 ~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~  203 (354)
                      +++||+|+ |-+|...+..+...|+ .|+++++.
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~-~V~~~~r~   34 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGY-EVHGLIRR   34 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcC-EEEEEECC
Confidence            57899998 9999999999999999 89999874

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=93.47  E-value=0.13  Score=43.06  Aligned_cols=73  Identities=16%  Similarity=0.129  Sum_probs=45.6

Q ss_pred             eEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhc-CCceEE-cCCCCChhHHHHHHHHcCCCccEEEEccc
Q 018529          172 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF-GVTDFV-NTSEHDRPIQEVIAEMTNGGVDRSVECTG  248 (354)
Q Consensus       172 ~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~l-g~~~v~-~~~~~~~~~~~~i~~~~~~~~dvv~d~~g  248 (354)
                      +|||+|+ |-+|...++.+...|...|+++++...+...+.+. ++..+. |..+. .++.+.+.+    ++|+|+.+++
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~~~~~~~i~~Di~~~-~~~~~~~~~----~~d~Vih~a~   76 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIH-SEWIEYHVK----KCDVVLPLVA   76 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTC-SHHHHHHHH----HCSEEEECBC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhccCCCeEEEECccCCh-HHHHHHHHh----CCCccccccc
Confidence            5899987 99999998888888843899998766554444332 222221 22222 234333322    4899999876


Q ss_pred             C
Q 018529          249 N  249 (354)
Q Consensus       249 ~  249 (354)
                      .
T Consensus        77 ~   77 (342)
T d2blla1          77 I   77 (342)
T ss_dssp             C
T ss_pred             c
Confidence            4

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=93.44  E-value=0.3  Score=36.75  Aligned_cols=96  Identities=21%  Similarity=0.202  Sum_probs=57.2

Q ss_pred             eEEEEcCChhHHHHHHHHHHcCCcEEEEEcC-C-hhhHHHHHhcCCceEEcCCC----------CChhHHHHHHHHcCCC
Q 018529          172 SVAVFGLGAVGLAAAEGARIAGASRIIGVDR-S-SKRFEEAKKFGVTDFVNTSE----------HDRPIQEVIAEMTNGG  239 (354)
Q Consensus       172 ~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~-~-~~~~~~~~~lg~~~v~~~~~----------~~~~~~~~i~~~~~~~  239 (354)
                      +|.|.|.|-+|...+..+....--.++++.. + ......+...+.......+.          ....+.+..     .+
T Consensus         3 KVaINGfGRIGR~v~Ral~~~~dievVaInd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~g~~~~~~-----~~   77 (178)
T d1b7go1           3 NVAVNGYGTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLI-----KT   77 (178)
T ss_dssp             EEEEECCSHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHH-----HH
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCCEEEEEECCCCcHHHHHhcccCcceeccCccceeccccceecCCchhhhh-----hc
Confidence            5889999999999999888664327777643 2 22333333333322111100          000121111     14


Q ss_pred             ccEEEEcccChHhHHHHHHHhhCCCceEEEEcCC
Q 018529          240 VDRSVECTGNIDNMISAFECVHDGWGVAVLVGVP  273 (354)
Q Consensus       240 ~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~  273 (354)
                      +|+|+||+|.....+.+-..+..+ -++++.+..
T Consensus        78 vDiViecTG~f~~~e~a~~hl~~G-~KvIi~~~~  110 (178)
T d1b7go1          78 SDIVVDTTPNGVGAQYKPIYLQLQ-RNAIFQGGE  110 (178)
T ss_dssp             CSEEEECCSTTHHHHHHHHHHHTT-CEEEECTTS
T ss_pred             CCEEEECCCCcCCHHHHHHHHHcC-CEEEEECCC
Confidence            899999999877777888888775 677766543

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=93.44  E-value=0.046  Score=41.93  Aligned_cols=40  Identities=25%  Similarity=0.287  Sum_probs=34.7

Q ss_pred             CCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH
Q 018529          170 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA  210 (354)
Q Consensus       170 ~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~  210 (354)
                      =++|.|+|+|.||...+.++...|. .|+..+.+++..+.+
T Consensus         4 I~~vaViGaG~mG~~iA~~~a~~G~-~V~l~D~~~~~l~~~   43 (186)
T d1wdka3           4 VKQAAVLGAGIMGGGIAYQSASKGT-PILMKDINEHGIEQG   43 (186)
T ss_dssp             CSSEEEECCHHHHHHHHHHHHHTTC-CEEEECSSHHHHHHH
T ss_pred             CCEEEEECcCHHHHHHHHHHHhCCC-eEEEEECCHHHHhhh
Confidence            3679999999999998888888899 899999999876654

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=93.44  E-value=0.044  Score=45.74  Aligned_cols=38  Identities=26%  Similarity=0.317  Sum_probs=32.5

Q ss_pred             CCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCCh
Q 018529          166 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  204 (354)
Q Consensus       166 ~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~  204 (354)
                      .....++|+|+|+|..|+.++..+...|. +|++++.++
T Consensus        26 ~~~~pkkV~IIGaG~aGLsaA~~L~~~G~-~V~vlE~~~   63 (370)
T d2iida1          26 ATSNPKHVVIVGAGMAGLSAAYVLAGAGH-QVTVLEASE   63 (370)
T ss_dssp             CCSSCCEEEEECCBHHHHHHHHHHHHHTC-EEEEECSSS
T ss_pred             CCCCCCeEEEECCCHHHHHHHHHHHHCCC-CEEEEeCCC
Confidence            34556799999999999999999999998 999998654

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=93.38  E-value=0.062  Score=38.15  Aligned_cols=36  Identities=22%  Similarity=0.286  Sum_probs=31.4

Q ss_pred             CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCCh
Q 018529          168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  204 (354)
Q Consensus       168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~  204 (354)
                      +..++++|+|+|.+|+-.+++...+|. +|..+.+.+
T Consensus        24 ~~p~~vvIiGgG~IG~E~A~~~~~~G~-~Vtive~~~   59 (125)
T d1ojta2          24 EVPGKLLIIGGGIIGLEMGTVYSTLGS-RLDVVEMMD   59 (125)
T ss_dssp             CCCSEEEEESCSHHHHHHHHHHHHHTC-EEEEECSSS
T ss_pred             ccCCeEEEECCCHHHHHHHHHhhcCCC-EEEEEEeec
Confidence            446899999999999999999999999 888886653

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=93.32  E-value=0.052  Score=38.36  Aligned_cols=34  Identities=24%  Similarity=0.102  Sum_probs=29.4

Q ss_pred             CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCC
Q 018529          169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS  203 (354)
Q Consensus       169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~  203 (354)
                      ..++++|+|+|.+|+-.++++..+|. .|..+.++
T Consensus        19 ~P~~vvIIGgG~iG~E~A~~l~~lG~-~Vtii~~~   52 (122)
T d1h6va2          19 CPGKTLVVGASYVALECAGFLAGIGL-DVTVMVRS   52 (122)
T ss_dssp             CCCSEEEECCSHHHHHHHHHHHHTTC-CEEEEESS
T ss_pred             CCCeEEEECCCccHHHHHHHHhhcCC-eEEEEEec
Confidence            44789999999999999999999999 77777654

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=93.28  E-value=0.065  Score=37.33  Aligned_cols=34  Identities=26%  Similarity=0.339  Sum_probs=30.3

Q ss_pred             CCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCCh
Q 018529          170 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  204 (354)
Q Consensus       170 ~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~  204 (354)
                      .++++|+|+|.+|+-+++.+..+|. .|..+.+.+
T Consensus        21 p~~vvIiGgG~~G~E~A~~l~~~g~-~Vtlve~~~   54 (115)
T d1lvla2          21 PQHLVVVGGGYIGLELGIAYRKLGA-QVSVVEARE   54 (115)
T ss_dssp             CSEEEEECCSHHHHHHHHHHHHHTC-EEEEECSSS
T ss_pred             CCeEEEECCCHHHHHHHHHHhhccc-ceEEEeeec
Confidence            4789999999999999999999999 888887654

>d1xtpa_ c.66.1.42 (A:) Hypothetical protein Lmaj004091aaa (LmjF30.0810) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Hypothetical protein Lmaj004091aaa (LmjF30.0810)
species: Leishmania major [TaxId: 5664]

Probab=93.21  E-value=0.14  Score=41.20  Aligned_cols=100  Identities=13%  Similarity=-0.037  Sum_probs=65.7

Q ss_pred             hhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhc-CCceEEcCCCCChhHHHHHHHHc--CCC
Q 018529          163 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF-GVTDFVNTSEHDRPIQEVIAEMT--NGG  239 (354)
Q Consensus       163 ~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~l-g~~~v~~~~~~~~~~~~~i~~~~--~~~  239 (354)
                      +.....++.+||=+|||. |..+..++...+. .|.+++.+++-.+.+++. .....+.+...+      +.++.  .+.
T Consensus        87 ~~l~~~~~~~vLD~GcG~-G~~t~~ll~~~~~-~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~d------~~~~~~~~~~  158 (254)
T d1xtpa_          87 ASLPGHGTSRALDCGAGI-GRITKNLLTKLYA-TTDLLEPVKHMLEEAKRELAGMPVGKFILAS------METATLPPNT  158 (254)
T ss_dssp             HTSTTCCCSEEEEETCTT-THHHHHTHHHHCS-EEEEEESCHHHHHHHHHHTTTSSEEEEEESC------GGGCCCCSSC
T ss_pred             hhCCCCCCCeEEEecccC-ChhhHHHHhhcCc-eEEEEcCCHHHHHhhhccccccccceeEEcc------ccccccCCCc
Confidence            344556777888889874 8888888876665 899999999998888763 221222221111      11222  237


Q ss_pred             ccEEEEccc-----Ch---HhHHHHHHHhhCCCceEEEEc
Q 018529          240 VDRSVECTG-----NI---DNMISAFECVHDGWGVAVLVG  271 (354)
Q Consensus       240 ~dvv~d~~g-----~~---~~~~~~~~~l~~~~g~~v~~g  271 (354)
                      ||+|+..-.     .+   ..+..+.+.|+++ |.+++..
T Consensus       159 fD~I~~~~vl~hl~d~d~~~~l~~~~~~Lkpg-G~iii~e  197 (254)
T d1xtpa_         159 YDLIVIQWTAIYLTDADFVKFFKHCQQALTPN-GYIFFKE  197 (254)
T ss_dssp             EEEEEEESCGGGSCHHHHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             cceEEeeccccccchhhhHHHHHHHHHhcCCC-cEEEEEe
Confidence            999987432     11   3477888899997 9888754

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.18  E-value=0.074  Score=37.70  Aligned_cols=34  Identities=15%  Similarity=0.154  Sum_probs=30.5

Q ss_pred             CCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCCh
Q 018529          170 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  204 (354)
Q Consensus       170 ~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~  204 (354)
                      .++++|+|+|.+|+-+++.+..+|. +|..+.+++
T Consensus        22 pk~vvIvGgG~iG~E~A~~l~~~G~-~Vtlv~~~~   55 (125)
T d3grsa2          22 PGRSVIVGAGYIAVEMAGILSALGS-KTSLMIRHD   55 (125)
T ss_dssp             CSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             CCEEEEEcCCccHHHHHHHHhcCCc-EEEEEeecc
Confidence            3789999999999999999999999 898897764

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=93.07  E-value=0.035  Score=45.24  Aligned_cols=32  Identities=16%  Similarity=0.278  Sum_probs=28.0

Q ss_pred             eEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCCh
Q 018529          172 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS  204 (354)
Q Consensus       172 ~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~  204 (354)
                      +|||+|+ |-+|...+..++..|. .|+++++++
T Consensus         3 KIlItGasGfiG~~l~~~L~~~g~-~Vi~~~r~~   35 (281)
T d1vl0a_           3 KILITGANGQLGREIQKQLKGKNV-EVIPTDVQD   35 (281)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSE-EEEEECTTT
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCC-EEEEeechh
Confidence            5899997 9999999999999998 899997653

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.07  E-value=0.027  Score=47.07  Aligned_cols=31  Identities=23%  Similarity=0.328  Sum_probs=27.3

Q ss_pred             CeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcC
Q 018529          171 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR  202 (354)
Q Consensus       171 ~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~  202 (354)
                      ++|||+|+ |-+|...+..+...|. .|+++++
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~-~V~~~d~   33 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGH-EVTVVDN   33 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeC
Confidence            68999997 9999999988888898 8888864

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=92.92  E-value=0.069  Score=42.67  Aligned_cols=35  Identities=26%  Similarity=0.315  Sum_probs=30.7

Q ss_pred             CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCC
Q 018529          168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS  203 (354)
Q Consensus       168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~  203 (354)
                      +...+|+|+|+|..|++++..+...|. +|+++++.
T Consensus         4 ~~~~kVvVIGaGiaGl~~A~~L~~~G~-~V~vier~   38 (268)
T d1c0pa1           4 HSQKRVVVLGSGVIGLSSALILARKGY-SVHILARD   38 (268)
T ss_dssp             CCSCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred             CCCCcEEEECccHHHHHHHHHHHHCCC-CEEEEeCC
Confidence            445689999999999999999999999 89999864

>d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose-fructose oxidoreductase, N-terminal domain
species: Zymomonas mobilis [TaxId: 542]

Probab=92.83  E-value=0.13  Score=40.39  Aligned_cols=93  Identities=20%  Similarity=0.239  Sum_probs=60.1

Q ss_pred             eEEEEcCChhHHH-HHHHHHHc-CCcEEE-EEcCChhhHH-HHHhcCCc--eEEcCCCCChhHHHHHHHHcCCCccEEEE
Q 018529          172 SVAVFGLGAVGLA-AAEGARIA-GASRII-GVDRSSKRFE-EAKKFGVT--DFVNTSEHDRPIQEVIAEMTNGGVDRSVE  245 (354)
Q Consensus       172 ~vlI~G~g~~G~~-a~~~a~~~-g~~~vi-~v~~~~~~~~-~~~~lg~~--~v~~~~~~~~~~~~~i~~~~~~~~dvv~d  245 (354)
                      +|.|+|+|.+|.. .+...+.. +. .++ ++++++++.+ +++++|..  .+..+.+    +.+.+   ....+|+|+.
T Consensus        35 riaiIG~G~~~~~~~~~~~~~~~~~-~ivav~d~~~~~a~~~~~~~~i~~~~~~~~~d----~~ell---~~~~iD~V~I  106 (221)
T d1h6da1          35 GYAIVGLGKYALNQILPGFAGCQHS-RIEALVSGNAEKAKIVAAEYGVDPRKIYDYSN----FDKIA---KDPKIDAVYI  106 (221)
T ss_dssp             EEEEECCSHHHHHTHHHHTTTCSSE-EEEEEECSCHHHHHHHHHHTTCCGGGEECSSS----GGGGG---GCTTCCEEEE
T ss_pred             EEEEEcCcHHHHHHHHHHHHhCCCc-eEEEEecCCHHHHHHHHHhhccccccccccCc----hhhhc---ccccceeeee
Confidence            6788899999863 44443433 56 555 5577777755 45667763  2444433    21111   2237999999


Q ss_pred             cccChHhHHHHHHHhhCCCceEEEEcCCC
Q 018529          246 CTGNIDNMISAFECVHDGWGVAVLVGVPS  274 (354)
Q Consensus       246 ~~g~~~~~~~~~~~l~~~~g~~v~~g~~~  274 (354)
                      ++....+.+.+.+++..  |+=+++.-+.
T Consensus       107 ~tp~~~H~~~~~~al~~--gk~v~~EKPl  133 (221)
T d1h6da1         107 ILPNSLHAEFAIRAFKA--GKHVMCEKPM  133 (221)
T ss_dssp             CSCGGGHHHHHHHHHHT--TCEEEECSSC
T ss_pred             ccchhhhhhHHHHhhhc--chhhhcCCCc
Confidence            99887888899999987  5667776543

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.80  E-value=0.056  Score=43.83  Aligned_cols=33  Identities=27%  Similarity=0.395  Sum_probs=28.8

Q ss_pred             eEEEEcCChhHHHHHHHHHHcCCcEEEEEcCCh
Q 018529          172 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  204 (354)
Q Consensus       172 ~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~  204 (354)
                      .|+|+|+|+.|++++.+++..|...|+++++++
T Consensus         3 ~V~IvGaG~aGl~~A~~L~~~Gi~~V~V~Er~~   35 (288)
T d3c96a1           3 DILIAGAGIGGLSCALALHQAGIGKVTLLESSS   35 (288)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCSEEEEEESSS
T ss_pred             EEEEECcCHHHHHHHHHHHhCCCCeEEEEeCCC
Confidence            589999999999999999999976888887754

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=92.77  E-value=0.4  Score=36.42  Aligned_cols=87  Identities=13%  Similarity=0.119  Sum_probs=58.8

Q ss_pred             CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEccc
Q 018529          169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  248 (354)
Q Consensus       169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g  248 (354)
                      .+.+|.|+|.|.+|...+++++.+|. +|++.++.....       ........    .+.+.+++     .|+|..+.+
T Consensus        43 ~~~~vgiiG~G~IG~~va~~l~~fg~-~v~~~d~~~~~~-------~~~~~~~~----~l~ell~~-----sDii~i~~p  105 (188)
T d1sc6a1          43 RGKKLGIIGYGHIGTQLGILAESLGM-YVYFYDIENKLP-------LGNATQVQ----HLSDLLNM-----SDVVSLHVP  105 (188)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCCC-------CTTCEECS----CHHHHHHH-----CSEEEECCC
T ss_pred             cceEEEEeecccchhhhhhhcccccc-eEeeccccccch-------hhhhhhhh----hHHHHHhh-----ccceeeccc
Confidence            57899999999999999999999999 899997653211       11111111    14444433     689888765


Q ss_pred             ChH-----hHHHHHHHhhCCCceEEEEcCC
Q 018529          249 NID-----NMISAFECVHDGWGVAVLVGVP  273 (354)
Q Consensus       249 ~~~-----~~~~~~~~l~~~~g~~v~~g~~  273 (354)
                      -.+     .-+..++.++++ ..+|.++..
T Consensus       106 lt~~T~~li~~~~l~~mk~~-a~lIN~aRG  134 (188)
T d1sc6a1         106 ENPSTKNMMGAKEISLMKPG-SLLINASRG  134 (188)
T ss_dssp             SSTTTTTCBCHHHHHHSCTT-EEEEECSCS
T ss_pred             CCcchhhhccHHHHhhCCCC-CEEEEcCcH
Confidence            321     234678888886 777777654

>d1hdgo1 c.2.1.3 (O:1-148,O:313-331) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermotoga maritima [TaxId: 2336]

Probab=92.75  E-value=0.38  Score=35.75  Aligned_cols=97  Identities=23%  Similarity=0.307  Sum_probs=59.6

Q ss_pred             eEEEEcCChhHHHHHHHHHHc---CCcEEEEEcC--ChhhHHHHHhc----CC---c------e-EE------cCCCCCh
Q 018529          172 SVAVFGLGAVGLAAAEGARIA---GASRIIGVDR--SSKRFEEAKKF----GV---T------D-FV------NTSEHDR  226 (354)
Q Consensus       172 ~vlI~G~g~~G~~a~~~a~~~---g~~~vi~v~~--~~~~~~~~~~l----g~---~------~-v~------~~~~~~~  226 (354)
                      +|.|.|-|-+|.+....+...   .. .|+++..  +.+...++-++    |.   +      . ++      .+...+ 
T Consensus         2 kIgINGfGRIGR~v~R~~~~~~~~~i-~vvaINd~~~~e~~ayLlkyDS~hG~~~~~v~~~~~~l~ing~~I~~~~~~~-   79 (169)
T d1hdgo1           2 RVAINGFGRIGRLVYRIIYERKNPDI-EVVAINDLTDTKTLAHLLKYDSVHKKFPGKVEYTENSLIVDGKEIKVFAEPD-   79 (169)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHTCTTC-EEEEEECSSCHHHHHHHHHCCTTTCCCSSCEEECSSEEEETTEEEEEECCSS-
T ss_pred             EEEEECCChHHHHHHHHHHhccCCCE-EEEEeccCccHHHHHHHHhccccccccCceEEEECCEEEECCEEEEEEeCCC-
Confidence            688999999999999877643   34 7777632  34555555432    21   0      0 01      011111 


Q ss_pred             hHHHHHHHHcCC--CccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCC
Q 018529          227 PIQEVIAEMTNG--GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD  276 (354)
Q Consensus       227 ~~~~~i~~~~~~--~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~  276 (354)
                           ..++..+  ++|+|+||+|.....+.+...+..+ .+-|++..+..+
T Consensus        80 -----p~~i~W~~~gvD~ViEcTG~f~t~~~~~~hl~~G-akkViiSAP~kd  125 (169)
T d1hdgo1          80 -----PSKLPWKDLGVDFVIESTGVFRNREKAELHLQAG-AKKVIITAPAKG  125 (169)
T ss_dssp             -----GGGSCHHHHTCCEEEECSSSCCBHHHHTHHHHTT-CSEEEESSCCBS
T ss_pred             -----hhhCCccccCCCEEEEecceeccccchhhhccCC-CceEEEecccCC
Confidence                 1111111  7999999999877788888899886 666666665533

>d2ex4a1 c.66.1.42 (A:2-224) Adrenal gland protein AD-003 (C9orf32) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Adrenal gland protein AD-003 (C9orf32)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.74  E-value=0.077  Score=41.70  Aligned_cols=100  Identities=14%  Similarity=0.018  Sum_probs=63.6

Q ss_pred             cCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhc----CCceEEcCCCCChhHHHHHHHHcCCCc
Q 018529          165 AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF----GVTDFVNTSEHDRPIQEVIAEMTNGGV  240 (354)
Q Consensus       165 ~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~l----g~~~v~~~~~~~~~~~~~i~~~~~~~~  240 (354)
                      ....++.+||=+|||. |..+..+++..+. +|++++.+++-.+.+++.    +...+ .+...+  +.+ + ....+.+
T Consensus        56 ~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~~vD~s~~~l~~ak~~~~~~~~~~~-~f~~~d--~~~-~-~~~~~~f  128 (222)
T d2ex4a1          56 PNKTGTSCALDCGAGI-GRITKRLLLPLFR-EVDMVDITEDFLVQAKTYLGEEGKRVR-NYFCCG--LQD-F-TPEPDSY  128 (222)
T ss_dssp             --CCCCSEEEEETCTT-THHHHHTTTTTCS-EEEEEESCHHHHHHHHHHTGGGGGGEE-EEEECC--GGG-C-CCCSSCE
T ss_pred             cCCCCCCEEEEeccCC-CHhhHHHHHhcCC-EEEEeecCHHHhhcccccccccccccc-cccccc--ccc-c-ccccccc
Confidence            3456778899999874 7777777766665 899999999988888663    22222 111111  111 0 0112379


Q ss_pred             cEEEEcc-----cCh---HhHHHHHHHhhCCCceEEEEcC
Q 018529          241 DRSVECT-----GNI---DNMISAFECVHDGWGVAVLVGV  272 (354)
Q Consensus       241 dvv~d~~-----g~~---~~~~~~~~~l~~~~g~~v~~g~  272 (354)
                      |+|+...     ..+   ..+..+.+.|+++ |.+++...
T Consensus       129 D~I~~~~~l~h~~~~~~~~~l~~i~~~Lk~~-G~~~i~~~  167 (222)
T d2ex4a1         129 DVIWIQWVIGHLTDQHLAEFLRRCKGSLRPN-GIIVIKDN  167 (222)
T ss_dssp             EEEEEESCGGGSCHHHHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             cccccccccccchhhhhhhHHHHHHHhcCCc-ceEEEEEc
Confidence            9998732     222   3677888899997 99887643

>d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: BC2162-like
domain: Methyltransferase BC2162
species: Bacillus cereus [TaxId: 1396]

Probab=92.74  E-value=0.18  Score=41.22  Aligned_cols=97  Identities=15%  Similarity=0.176  Sum_probs=65.5

Q ss_pred             cCCCCCCeEEEEcCChhHHHHHHHHHHcCC-cEEEEEcCChhhHHHHHh----cCCceEEcCCCCChhHHHHHHHHc-CC
Q 018529          165 AKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMT-NG  238 (354)
Q Consensus       165 ~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~-~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~~~-~~  238 (354)
                      .++.++.+||=+|+|. |..+..+++..+. .+|+++|.+++..+.+++    .+...-+...+..        ++. ++
T Consensus        23 ~~~~~~~~ILDiGcG~-G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~f~~~d~~--------~~~~~~   93 (281)
T d2gh1a1          23 WKITKPVHIVDYGCGY-GYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDAT--------EIELND   93 (281)
T ss_dssp             SCCCSCCEEEEETCTT-THHHHHHTTTSCTTCEEEEEECCHHHHHHHHHHHHSSSSEEEEEESCTT--------TCCCSS
T ss_pred             hccCCcCEEEEecCcC-CHHHHHHHHhCCCCCEEEEEecchhHhhhhhcccccccccccccccccc--------cccccC
Confidence            3567888999899974 8888889887642 289999999988887754    3443222111111        111 23


Q ss_pred             CccEEEEccc-----C-hHhHHHHHHHhhCCCceEEEEc
Q 018529          239 GVDRSVECTG-----N-IDNMISAFECVHDGWGVAVLVG  271 (354)
Q Consensus       239 ~~dvv~d~~g-----~-~~~~~~~~~~l~~~~g~~v~~g  271 (354)
                      .+|+|+....     . ...++.+.+.|+++ |.++...
T Consensus        94 ~fD~v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~lii~~  131 (281)
T d2gh1a1          94 KYDIAICHAFLLHMTTPETMLQKMIHSVKKG-GKIICFE  131 (281)
T ss_dssp             CEEEEEEESCGGGCSSHHHHHHHHHHTEEEE-EEEEEEE
T ss_pred             CceEEEEehhhhcCCCHHHHHHHHHHHcCcC-cEEEEEE
Confidence            7999986432     2 24678899999997 9887654

>d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Virulence factor MviM
species: Escherichia coli [TaxId: 562]

Probab=92.71  E-value=0.17  Score=37.60  Aligned_cols=89  Identities=12%  Similarity=0.108  Sum_probs=57.4

Q ss_pred             eEEEEcCChhHHH-HHHHHHHc-CCcEEEEEcCChhhHH-HHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEccc
Q 018529          172 SVAVFGLGAVGLA-AAEGARIA-GASRIIGVDRSSKRFE-EAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  248 (354)
Q Consensus       172 ~vlI~G~g~~G~~-a~~~a~~~-g~~~vi~v~~~~~~~~-~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g  248 (354)
                      +|.|+|+|.+|.- .+...+.. +.+.+.+.++++++.+ +.+++++..   +++    +.+.+     ..+|+|+.++.
T Consensus         3 ri~iIG~G~~g~~~~~~~l~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~---~~~----~~~l~-----~~~D~V~I~tp   70 (164)
T d1tlta1           3 RIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESWRIPY---ADS----LSSLA-----ASCDAVFVHSS   70 (164)
T ss_dssp             EEEEECCSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHHTCCB---CSS----HHHHH-----TTCSEEEECSC
T ss_pred             EEEEEcCCHHHHHHHHHHHHhCCCcEEEEEEechhHhhhhhhhcccccc---ccc----chhhh-----hhccccccccc
Confidence            5789999999964 56666554 5633344556666544 456677642   111    22222     24899999998


Q ss_pred             ChHhHHHHHHHhhCCCceEEEEcCCC
Q 018529          249 NIDNMISAFECVHDGWGVAVLVGVPS  274 (354)
Q Consensus       249 ~~~~~~~~~~~l~~~~g~~v~~g~~~  274 (354)
                      .....+.+..++..  |.=+++.-+.
T Consensus        71 ~~~h~~~~~~al~~--gk~V~~EKPl   94 (164)
T d1tlta1          71 TASHFDVVSTLLNA--GVHVCVDKPL   94 (164)
T ss_dssp             TTHHHHHHHHHHHT--TCEEEEESSS
T ss_pred             chhccccccccccc--cceeeccccc
Confidence            87788888888877  5556776543

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=92.65  E-value=0.21  Score=39.32  Aligned_cols=80  Identities=20%  Similarity=0.171  Sum_probs=54.2

Q ss_pred             CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh-cCCceEEcCCCCChhHHHHHHHHcCCCccEEEEc
Q 018529          168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  246 (354)
Q Consensus       168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~-lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~  246 (354)
                      -.|.+|+|.|.|.+|..+++++...|+ ++++++.+..+.+.+.. .|... +...+           +..-.+|+.+=|
T Consensus        37 l~g~~v~IqG~GnVG~~~a~~L~~~Ga-kvv~~d~~~~~~~~~~~~~g~~~-~~~~~-----------~~~~~cDIl~Pc  103 (230)
T d1leha1          37 LEGLAVSVQGLGNVAKALCKKLNTEGA-KLVVTDVNKAAVSAAVAEEGADA-VAPNA-----------IYGVTCDIFAPC  103 (230)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCCEE-CCGGG-----------TTTCCCSEEEEC
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEeecccHHHHHHHHHhcCCcc-cCCcc-----------cccccccEeccc
Confidence            468899999999999999999999999 99999988888766543 55532 21111           112267887766


Q ss_pred             ccChHhHHHHHHHh
Q 018529          247 TGNIDNMISAFECV  260 (354)
Q Consensus       247 ~g~~~~~~~~~~~l  260 (354)
                      +-+...-+.....+
T Consensus       104 A~~~~I~~~~~~~l  117 (230)
T d1leha1         104 ALGAVLNDFTIPQL  117 (230)
T ss_dssp             SCSCCBSTTHHHHC
T ss_pred             ccccccChHHhhcc
Confidence            54423333334444

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=92.65  E-value=0.081  Score=39.63  Aligned_cols=36  Identities=28%  Similarity=0.395  Sum_probs=30.2

Q ss_pred             CCCeEEEEcCChhHHHHHHHHHHcCCc-EEEEEcCCh
Q 018529          169 RGSSVAVFGLGAVGLAAAEGARIAGAS-RIIGVDRSS  204 (354)
Q Consensus       169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~-~vi~v~~~~  204 (354)
                      .|++|+|+|+|.+|+.+++.++..+.+ +|+.+++++
T Consensus         1 ~gkrivIvGgG~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCCcEEEECccHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            478999999999999999998888753 788887655

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=92.63  E-value=0.093  Score=39.94  Aligned_cols=39  Identities=26%  Similarity=0.325  Sum_probs=33.2

Q ss_pred             eEEEE-cCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH
Q 018529          172 SVAVF-GLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK  211 (354)
Q Consensus       172 ~vlI~-G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~  211 (354)
                      +|.|+ |+|.+|.+.++.+...|+ +|+..+|++++.+.+.
T Consensus         2 ki~vigGaG~iG~alA~~la~~G~-~V~l~~R~~e~~~~l~   41 (212)
T d1jaya_           2 RVALLGGTGNLGKGLALRLATLGH-EIVVGSRREEKAEAKA   41 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTC-EEEEEESSHHHHHHHH
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHH
Confidence            47788 569999999999999999 8889999998876653

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=92.59  E-value=0.047  Score=43.82  Aligned_cols=33  Identities=27%  Similarity=0.446  Sum_probs=28.6

Q ss_pred             eEEEEcCChhHHHHHHHHHHcCCcEEEEEcCCh
Q 018529          172 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  204 (354)
Q Consensus       172 ~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~  204 (354)
                      .|+|+|+|+.|+.++..+...|.+.|+++++++
T Consensus         2 ~V~IIGaG~aGL~aA~~L~~~G~~~V~vlE~~~   34 (347)
T d1b5qa1           2 RVIVVGAGMSGISAAKRLSEAGITDLLILEATD   34 (347)
T ss_dssp             CEEEECCBHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred             CEEEECCcHHHHHHHHHHHhCCCCcEEEEECCC
Confidence            589999999999999999999975699998754

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.52  E-value=0.048  Score=44.74  Aligned_cols=33  Identities=27%  Similarity=0.392  Sum_probs=29.6

Q ss_pred             eEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChh
Q 018529          172 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK  205 (354)
Q Consensus       172 ~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~  205 (354)
                      .|+|+|+|+.|++++..+...|. +|+++++.++
T Consensus         4 ~V~IvGaGp~Gl~~A~~L~~~G~-~v~vlE~~~~   36 (292)
T d1k0ia1           4 QVAIIGAGPSGLLLGQLLHKAGI-DNVILERQTP   36 (292)
T ss_dssp             SEEEECCSHHHHHHHHHHHHHTC-CEEEECSSCH
T ss_pred             CEEEECcCHHHHHHHHHHHHCCC-CEEEEeCCCC
Confidence            58999999999999999999999 8999987653

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=92.48  E-value=0.88  Score=32.80  Aligned_cols=39  Identities=31%  Similarity=0.317  Sum_probs=31.4

Q ss_pred             CCeEEEEcCChhHHHHHHHHHHcC-CcEEEEEcCChhhHH
Q 018529          170 GSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFE  208 (354)
Q Consensus       170 ~~~vlI~G~g~~G~~a~~~a~~~g-~~~vi~v~~~~~~~~  208 (354)
                      ..+|.|+|+|.+|...+..+...| +..++.+|.++++.+
T Consensus         5 ~~KI~IIGaG~VG~~~A~~l~~~~~~~elvL~D~~~~~~~   44 (146)
T d1ez4a1           5 HQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDRTK   44 (146)
T ss_dssp             BCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHH
T ss_pred             CCEEEEECCCHHHHHHHHHHHhcCCCcEEEEeecccchhH
Confidence            458999999999999887777776 348999998886543

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.45  E-value=0.066  Score=44.56  Aligned_cols=44  Identities=23%  Similarity=0.243  Sum_probs=33.8

Q ss_pred             CeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCCh--hhHHHHHhcCC
Q 018529          171 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS--KRFEEAKKFGV  215 (354)
Q Consensus       171 ~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~--~~~~~~~~lg~  215 (354)
                      ++|||+|+ |-+|...+..+...|+ .|+++++..  ...+.++.++.
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~l~~~~~   47 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGY-RVHGLVARRSSDTRWRLRELGI   47 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCCSSCCCHHHHHTTC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcC-EEEEEECCCCcccHHHHHHhcc
Confidence            47999997 9999999998888899 899998744  23445555554

>d1y7la1 c.79.1.1 (A:2-311) O-acetylserine sulfhydrylase (Cysteine synthase) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Haemophilus influenzae [TaxId: 727]

Probab=92.44  E-value=0.64  Score=38.26  Aligned_cols=99  Identities=18%  Similarity=0.155  Sum_probs=66.0

Q ss_pred             hhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcC--ChhhHHHHHhcCCceEEcCCCC----------------
Q 018529          163 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDR--SSKRFEEAKKFGVTDFVNTSEH----------------  224 (354)
Q Consensus       163 ~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~--~~~~~~~~~~lg~~~v~~~~~~----------------  224 (354)
                      +...+.+++.|+...+|..|.++...|+.+|.+-++.+..  +..+.+.++.+|+..+......                
T Consensus        54 ~~g~~~~~~~vv~~SsGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~vv~~~~~~~~~~~~~~~~~~~~~~  133 (310)
T d1y7la1          54 KDGTLTKGKEIVDATSGNTGIALAYVAAARGYKITLTMPETMSLERKRLLCGLGVNLVLTEGAKGMKGAIAKAEEIVASD  133 (310)
T ss_dssp             HTTSSCTTCEEEESCCSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHC
T ss_pred             HcCCCCCCceeeeecCCCchHHHHHHHHHhhccccccchhhhhhhhhhhHHHhCCceEeccCccccchhhHHHHHHHHhh
Confidence            4455677777666677999999999999999965555533  4567778888998766422110                


Q ss_pred             -----------Ch--------hHHHHHHHHcCCCccEEEEcccChHhHHHHHHHhh
Q 018529          225 -----------DR--------PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVH  261 (354)
Q Consensus       225 -----------~~--------~~~~~i~~~~~~~~dvv~d~~g~~~~~~~~~~~l~  261 (354)
                                 +.        ....++.+..++.+|.|+.++|+..++.-....++
T Consensus       134 ~~~~~~~~~~~~~~~~~~~~~~~a~Ei~~~~~~~~d~vv~~~G~Gg~~~G~~~~lk  189 (310)
T d1y7la1         134 PSRYVMLKQFENPANPQIHRETTGPEIWKDTDGKVDVVVAGVGTGGSITGISRAIK  189 (310)
T ss_dssp             TTTEECCCTTTCTHHHHHHHHTHHHHHHHHTTTCEEEEEEECSSSHHHHHHHHHHH
T ss_pred             cCccccCCCCcchhhHHHhhhhHHHHHHHhcCCCCCEEEecCcCCcchhHHHHHHH
Confidence                       00        12233444444578999999988666666666654

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=92.40  E-value=1  Score=33.04  Aligned_cols=42  Identities=21%  Similarity=0.282  Sum_probs=33.9

Q ss_pred             CCCCCCeEEEEcCChhHHHHHHHHHHcCC-cEEEEEcCChhhH
Q 018529          166 KPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRF  207 (354)
Q Consensus       166 ~~~~~~~vlI~G~g~~G~~a~~~a~~~g~-~~vi~v~~~~~~~  207 (354)
                      ...+..+|.|+|+|.+|...+..+...|. ..++.+|.++++.
T Consensus        16 ~~~~~~KV~IIGaG~VG~~~A~~l~~~~l~~ElvLiD~~~~~a   58 (160)
T d1i0za1          16 ATVPNNKITVVGVGQVGMACAISILGKSLADELALVDVLEDKL   58 (160)
T ss_dssp             CCCCSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCHHHH
T ss_pred             ccCCCCeEEEECCCHHHHHHHHHHHhcCCCcEEEEEEeccchh
Confidence            34456799999999999998888888874 5799999887654

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=92.36  E-value=0.066  Score=42.59  Aligned_cols=37  Identities=27%  Similarity=0.252  Sum_probs=31.4

Q ss_pred             CCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhH
Q 018529          170 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRF  207 (354)
Q Consensus       170 ~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~  207 (354)
                      ++++||+|+ +++|.+.++.+...|+ +|+.+++++++.
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga-~V~i~~~~~~~~   38 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGY-RVVVLDLRREGE   38 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTC-EEEEEESSCCSS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCcccc
Confidence            367899987 9999999999999999 899998887643

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=92.35  E-value=0.24  Score=34.86  Aligned_cols=89  Identities=16%  Similarity=0.193  Sum_probs=54.8

Q ss_pred             CCCeEEEEcCCh--------hHHHH---HHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcC
Q 018529          169 RGSSVAVFGLGA--------VGLAA---AEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTN  237 (354)
Q Consensus       169 ~~~~vlI~G~g~--------~G~~a---~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~  237 (354)
                      .-++|||+|+|+        .-+++   +..++..|+ +++.+.++++....-..+ +++++. ..-..+....+-+.  
T Consensus         6 ~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~-~~iliN~NP~TVstd~d~-aD~lYf-ePlt~e~v~~Ii~~--   80 (127)
T d1a9xa3           6 DIKSILILGAGPIVIGQACEFDYSGAQACKALREEGY-RVINVNSNPATIMTDPEM-ADATYI-EPIHWEVVRKIIEK--   80 (127)
T ss_dssp             SCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTC-EEEEECSCTTCGGGCGGG-SSEEEC-SCCCHHHHHHHHHH--
T ss_pred             CCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCC-eEEEecCchHhhhcChhh-cceeee-ecCCHHHHHHHHHH--
Confidence            457899999874        22444   444556699 899999999876554332 234432 22221222233222  


Q ss_pred             CCccEEEEcccChHhHHHHHHHhhC
Q 018529          238 GGVDRSVECTGNIDNMISAFECVHD  262 (354)
Q Consensus       238 ~~~dvv~d~~g~~~~~~~~~~~l~~  262 (354)
                      +..|.|+-..|++..++.+.++...
T Consensus        81 E~pd~il~~~GGQtalnla~~L~~~  105 (127)
T d1a9xa3          81 ERPDAVLPTMGGQTALNCALELERQ  105 (127)
T ss_dssp             HCCSEEECSSSHHHHHHHHHHHHHT
T ss_pred             hCcCCeEEEeeeehHhHHHHHHHHc
Confidence            2689999999997777777776544

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=92.33  E-value=0.36  Score=36.35  Aligned_cols=81  Identities=10%  Similarity=0.067  Sum_probs=48.2

Q ss_pred             eEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChh--hHHHHHhcCCc---------eEEcCCCCChhHHHHHHHHcCCCc
Q 018529          172 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK--RFEEAKKFGVT---------DFVNTSEHDRPIQEVIAEMTNGGV  240 (354)
Q Consensus       172 ~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~--~~~~~~~lg~~---------~v~~~~~~~~~~~~~i~~~~~~~~  240 (354)
                      +|.|+|+|.+|.+.+..+-..|. .|....+..+  ..+.+.+-...         ..+...   .++.+.+     ...
T Consensus         2 kI~ViGaG~~GtalA~~la~~g~-~V~l~~r~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~---~~~~~~~-----~~a   72 (180)
T d1txga2           2 IVSILGAGAMGSALSVPLVDNGN-EVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWP---EQLEKCL-----ENA   72 (180)
T ss_dssp             EEEEESCCHHHHHHHHHHHHHCC-EEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECG---GGHHHHH-----TTC
T ss_pred             EEEEECCCHHHHHHHHHHHHCCC-EEEEEEecccHHHHHHHhhhhhhhhhcchhcccccccc---ccHHHHH-----hcc
Confidence            57899999999987777777787 8888866433  33333321110         001111   1233332     247


Q ss_pred             cEEEEcccChHhHHHHHHHhhC
Q 018529          241 DRSVECTGNIDNMISAFECVHD  262 (354)
Q Consensus       241 dvv~d~~g~~~~~~~~~~~l~~  262 (354)
                      |+|+.++.. ..++..++.+.+
T Consensus        73 d~Ii~avps-~~~~~~~~~l~~   93 (180)
T d1txga2          73 EVVLLGVST-DGVLPVMSRILP   93 (180)
T ss_dssp             SEEEECSCG-GGHHHHHHHHTT
T ss_pred             chhhcccch-hhhHHHHHhhcc
Confidence            999999987 556666655444

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=92.30  E-value=0.56  Score=33.83  Aligned_cols=70  Identities=20%  Similarity=0.136  Sum_probs=45.0

Q ss_pred             eEEEEcC-ChhHHHHHHHHHHcCC-cEEEEEcCChhhHHHHHhcCCc-----eEEcCCCCChhHHHHHHHHcCCCccEEE
Q 018529          172 SVAVFGL-GAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKKFGVT-----DFVNTSEHDRPIQEVIAEMTNGGVDRSV  244 (354)
Q Consensus       172 ~vlI~G~-g~~G~~a~~~a~~~g~-~~vi~v~~~~~~~~~~~~lg~~-----~v~~~~~~~~~~~~~i~~~~~~~~dvv~  244 (354)
                      +|.|+|| |.+|...+.++...+. +.++.++.++.+.+.+.-....     ..+.. ..  +..+.+     .+.|+|+
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a~Dl~~~~~~~~~~~~~~-~~--~~~~~~-----~~aDivV   73 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLG-PE--QLPDCL-----KGCDVVV   73 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEES-GG--GHHHHH-----TTCSEEE
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhhHHHhhhhhhcCCCeEEc-CC--ChHHHh-----CCCCEEE
Confidence            6889997 9999999888887775 5788898877654443221111     11111 11  133333     3589999


Q ss_pred             EcccC
Q 018529          245 ECTGN  249 (354)
Q Consensus       245 d~~g~  249 (354)
                      -+.|.
T Consensus        74 itag~   78 (144)
T d1mlda1          74 IPAGV   78 (144)
T ss_dssp             ECCSC
T ss_pred             ECCCc
Confidence            99885

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=92.28  E-value=0.91  Score=32.58  Aligned_cols=38  Identities=37%  Similarity=0.441  Sum_probs=30.4

Q ss_pred             CeEEEEcCChhHHHHHHHHHHcCC-cEEEEEcCChhhHH
Q 018529          171 SSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFE  208 (354)
Q Consensus       171 ~~vlI~G~g~~G~~a~~~a~~~g~-~~vi~v~~~~~~~~  208 (354)
                      .+|.|+|+|.+|..++..+...+. ..++.++.++++.+
T Consensus         2 ~Ki~IIGaG~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~   40 (143)
T d1llda1           2 TKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAKERVE   40 (143)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHH
T ss_pred             CEEEEECCCHHHHHHHHHHHhcCCCcEEEEEEeccccch
Confidence            468889999999998887777764 47999998886643

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=92.18  E-value=0.62  Score=32.68  Aligned_cols=92  Identities=9%  Similarity=0.075  Sum_probs=59.7

Q ss_pred             CeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcccCh
Q 018529          171 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI  250 (354)
Q Consensus       171 ~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~~  250 (354)
                      +.++|.|.|.+|...+..++  +. .|++++.++++.+.++..|...+. .+..+   .+.+++..-..++.++-++...
T Consensus         1 kHivI~G~g~~g~~l~~~L~--~~-~i~vi~~d~~~~~~~~~~~~~~i~-Gd~~~---~~~L~~a~i~~A~~vi~~~~~d   73 (129)
T d2fy8a1           1 RHVVICGWSESTLECLRELR--GS-EVFVLAEDENVRKKVLRSGANFVH-GDPTR---VSDLEKANVRGARAVIVNLESD   73 (129)
T ss_dssp             CCEEEESCCHHHHHHHHTSC--GG-GEEEEESCTTHHHHHHHTTCEEEE-SCTTS---HHHHHHTTCTTCSEEEECCSSH
T ss_pred             CEEEEECCCHHHHHHHHHHc--CC-CCEEEEcchHHHHHHHhcCccccc-cccCC---HHHHHHhhhhcCcEEEEeccch
Confidence            35888899999998777664  33 567788899999988888875443 33332   3456665444789999888764


Q ss_pred             Hh---HHHHHHHhhCCCceEEEE
Q 018529          251 DN---MISAFECVHDGWGVAVLV  270 (354)
Q Consensus       251 ~~---~~~~~~~l~~~~g~~v~~  270 (354)
                      ..   +-...+.+.+. .+++..
T Consensus        74 ~~n~~~~~~~r~~~~~-~~iia~   95 (129)
T d2fy8a1          74 SETIHCILGIRKIDES-VRIIAE   95 (129)
T ss_dssp             HHHHHHHHHHHHHCSS-SCEEEE
T ss_pred             hhhHHHHHHHHHHCCC-ceEEEE
Confidence            32   22334455565 554443

>d1gado1 c.2.1.3 (O:0-148,O:313-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Escherichia coli [TaxId: 562]

Probab=92.07  E-value=0.42  Score=35.33  Aligned_cols=98  Identities=29%  Similarity=0.361  Sum_probs=59.9

Q ss_pred             eEEEEcCChhHHHHHHHHHHcCCcEEEEEcCC--hhhHHHHHhc----CC---ce-------EEc------CCCCChhHH
Q 018529          172 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRS--SKRFEEAKKF----GV---TD-------FVN------TSEHDRPIQ  229 (354)
Q Consensus       172 ~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~--~~~~~~~~~l----g~---~~-------v~~------~~~~~~~~~  229 (354)
                      +|.|.|-|-+|.+....+....--.|+++...  .+...++-++    |.   +.       +++      +...+    
T Consensus         3 kigINGFGRIGR~v~R~~~~~~~i~ivaINd~~~~~~~ayLl~yDSvhG~~~~~v~~~~~~l~ing~~I~i~~~~~----   78 (166)
T d1gado1           3 KVGINGFGRIGRIVFRAAQKRSDIEIVAINDLLDADYMAYMLKYDSTHGRFDGTVEVKDGHLIVNGKKIRVTAERD----   78 (166)
T ss_dssp             EEEEECCSHHHHHHHHHHHTCSSEEEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSS----
T ss_pred             EEEEECCcHHHHHHHHHHhhCCCeEEEEEeCCCCHHHHhhhheecCCCCCcCCeEEEeCCEEEECCEEEEEEeCCC----
Confidence            47788999999999988876642267777433  2334444332    11   10       111      11111    


Q ss_pred             HHHHHHcCC--CccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCC
Q 018529          230 EVIAEMTNG--GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD  276 (354)
Q Consensus       230 ~~i~~~~~~--~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~  276 (354)
                        ..++..+  ++|+|+||+|.....+.+...+..+ .+-|++..+..+
T Consensus        79 --p~~i~W~~~gvDiViEcTG~f~t~~~~~~hl~~g-akkViiSaP~~d  124 (166)
T d1gado1          79 --PANLKWDEVGVDVVAEATGLFLTDETARKHITAG-AKKVVMTGPSKD  124 (166)
T ss_dssp             --GGGGCHHHHTCSEEEECSSSCCSHHHHTHHHHTT-CSEEEESSCCSS
T ss_pred             --hHHCCccccCCCEEEEccccccCHHHHHHHhcCC-CceEEeeccccc
Confidence              1112212  7999999999877788888999886 666777665543

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=92.05  E-value=0.17  Score=42.80  Aligned_cols=75  Identities=13%  Similarity=0.202  Sum_probs=45.5

Q ss_pred             CCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEc
Q 018529          168 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  246 (354)
Q Consensus       168 ~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~  246 (354)
                      .+.-+|||+|+ |-+|...+..+...|. .|+++++....... ...........+-.+  ..+..+.+  .++|.|+.+
T Consensus        13 ~~nMKILVTGgsGfIGs~lv~~L~~~g~-~V~~~d~~~~~~~~-~~~~~~~~~~~D~~~--~~~~~~~~--~~~d~Vih~   86 (363)
T d2c5aa1          13 SENLKISITGAGGFIASHIARRLKHEGH-YVIASDWKKNEHMT-EDMFCDEFHLVDLRV--MENCLKVT--EGVDHVFNL   86 (363)
T ss_dssp             TSCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCSSSC-GGGTCSEEEECCTTS--HHHHHHHH--TTCSEEEEC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCcC-EEEEEeCCCccchh-hhcccCcEEEeechh--HHHHHHHh--hcCCeEeec
Confidence            34668999987 9999999999999998 88888754332211 112222222222222  32222222  368999987


Q ss_pred             cc
Q 018529          247 TG  248 (354)
Q Consensus       247 ~g  248 (354)
                      ++
T Consensus        87 a~   88 (363)
T d2c5aa1          87 AA   88 (363)
T ss_dssp             CC
T ss_pred             cc
Confidence            74

>d2dula1 c.66.1.58 (A:3-377) N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TRM1-like
domain: N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=92.04  E-value=0.41  Score=40.70  Aligned_cols=94  Identities=16%  Similarity=0.142  Sum_probs=64.2

Q ss_pred             EEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh---c-CCce--------E------EcCCCCChhHHHHHHHHc
Q 018529          175 VFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK---F-GVTD--------F------VNTSEHDRPIQEVIAEMT  236 (354)
Q Consensus       175 I~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~---l-g~~~--------v------~~~~~~~~~~~~~i~~~~  236 (354)
                      +.+.++.|.-++.+|+..|+..|++.|.+++..+++++   + +...        .      +.....+  ....+.+ .
T Consensus        50 LD~~sasG~rsiRya~E~~~~~V~~nDis~~A~~~i~~N~~lN~~~~~~~~~~~~~~~~~~~~~~~~~D--a~~~~~~-~  126 (375)
T d2dula1          50 LDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDD--ANRLMAE-R  126 (375)
T ss_dssp             EESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESC--HHHHHHH-S
T ss_pred             EEcCCCccHHHHHHHHhCCCCEEEEecCCHHHHHHHHHHHHhcCccccccccccccccccceeEeehhh--hhhhhHh-h
Confidence            34557789999999999998899999999999999865   1 2211        0      1111111  3333332 2


Q ss_pred             CCCccEE-EEcccCh-HhHHHHHHHhhCCCceEEEEcC
Q 018529          237 NGGVDRS-VECTGNI-DNMISAFECVHDGWGVAVLVGV  272 (354)
Q Consensus       237 ~~~~dvv-~d~~g~~-~~~~~~~~~l~~~~g~~v~~g~  272 (354)
                      +..||+| +|..|++ +.+..++++++.+ |-+....+
T Consensus       127 ~~~fDvIDiDPfGs~~pfldsAi~a~~~~-Gll~vTaT  163 (375)
T d2dula1         127 HRYFHFIDLDPFGSPMEFLDTALRSAKRR-GILGVTAT  163 (375)
T ss_dssp             TTCEEEEEECCSSCCHHHHHHHHHHEEEE-EEEEEEEC
T ss_pred             cCcCCcccCCCCCCcHHHHHHHHHHhccC-CEEEEEec
Confidence            2379977 7888874 6788999999996 87776654

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=91.97  E-value=0.39  Score=40.22  Aligned_cols=37  Identities=24%  Similarity=0.269  Sum_probs=31.7

Q ss_pred             CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhh
Q 018529          169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR  206 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~  206 (354)
                      +.++|||+|+ |.+|...+..+...|. .|+++.|+..+
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~~~   39 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGH-HVRAQVHSLKG   39 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTC-CEEEEESCSCS
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCC-eEEEEECCcch
Confidence            5689999997 9999999999999999 78888786554

>d1wg8a2 c.66.1.23 (A:5-108,A:207-284) TM0872, methyltransferase domain {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermus thermophilus [TaxId: 274]

Probab=91.89  E-value=0.8  Score=34.41  Aligned_cols=104  Identities=21%  Similarity=0.255  Sum_probs=63.3

Q ss_pred             cCCCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEE
Q 018529          165 AKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRS  243 (354)
Q Consensus       165 ~~~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv  243 (354)
                      ..+++|..+ |.++ |.=|+. ..+++. +. +|+++|++++..+.+++.-..++..+...-.++.+.+..+..+.+|.|
T Consensus        14 l~~~~g~~~-vD~T~G~GGhs-~~iL~~-~~-~viaiD~D~~ai~~a~~~~~~~~~~~~~~f~~~~~~l~~~~~~~vdgI   89 (182)
T d1wg8a2          14 LAVRPGGVY-VDATLGGAGHA-RGILER-GG-RVIGLDQDPEAVARAKGLHLPGLTVVQGNFRHLKRHLAALGVERVDGI   89 (182)
T ss_dssp             HTCCTTCEE-EETTCTTSHHH-HHHHHT-TC-EEEEEESCHHHHHHHHHTCCTTEEEEESCGGGHHHHHHHTTCSCEEEE
T ss_pred             cCCCCCCEE-EEeCCCCcHHH-HHHhcc-cC-cEEEEhhhhhHHHHHhhccccceeEeehHHHHHHHHHHHcCCCccCEE
Confidence            456777764 5554 554554 344444 44 999999999999888775433332222222236665655544578877


Q ss_pred             EEcccCh---------------HhHHHHHHHhhCCCceEEEEcCC
Q 018529          244 VECTGNI---------------DNMISAFECVHDGWGVAVLVGVP  273 (354)
Q Consensus       244 ~d~~g~~---------------~~~~~~~~~l~~~~g~~v~~g~~  273 (354)
                      +=-.|-.               ..+....+.++++ |+++.+...
T Consensus        90 l~DLGvSs~qld~~~re~~~~~~~L~~~~~~lk~g-g~~~ii~fh  133 (182)
T d1wg8a2          90 LADLGVSSFHLDDPSDELNALKEFLEQAAEVLAPG-GRLVVIAFH  133 (182)
T ss_dssp             EEECSCCHHHHHCGGTHHHHHHHHHHHHHHHEEEE-EEEEEEECS
T ss_pred             EEEccCCHHHhhcchHHHHHHHHHHHHHHhhhCCC-CeEEEEecc
Confidence            5333321               1366777888887 888777543

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=91.84  E-value=0.93  Score=36.07  Aligned_cols=33  Identities=30%  Similarity=0.422  Sum_probs=29.4

Q ss_pred             CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEc
Q 018529          168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVD  201 (354)
Q Consensus       168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~  201 (354)
                      -.|.+|+|-|.|.+|..+++++...|+ +|+++.
T Consensus        34 l~g~~v~IQGfGnVG~~~a~~L~e~Ga-kvvavs   66 (255)
T d1bgva1          34 LVGKTVALAGFGNVAWGAAKKLAELGA-KAVTLS   66 (255)
T ss_dssp             STTCEEEECCSSHHHHHHHHHHHHHTC-EEEEEE
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEe
Confidence            467899999999999999999999999 777764

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.77  E-value=0.095  Score=43.72  Aligned_cols=36  Identities=25%  Similarity=0.386  Sum_probs=31.3

Q ss_pred             CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCCh
Q 018529          168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  204 (354)
Q Consensus       168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~  204 (354)
                      ++..+|+|+|+|..|+.|+..+...|. +|++++.++
T Consensus         3 ~~~~kViVIGaG~aGL~aA~~L~~~G~-~V~VlEa~~   38 (449)
T d2dw4a2           3 KKTGKVIIIGSGVSGLAAARQLQSFGM-DVTLLEARD   38 (449)
T ss_dssp             SCCCEEEEECCBHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             CCCCcEEEECCCHHHHHHHHHHHhCCC-CEEEEeCCC
Confidence            456789999999999999999999999 899997653

>d3cmco1 c.2.1.3 (O:0-148,O:313-333) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Bacillus stearothermophilus, nca 1503 [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Bacillus stearothermophilus, nca 1503 [TaxId: 1422]

Probab=91.59  E-value=0.68  Score=34.37  Aligned_cols=98  Identities=23%  Similarity=0.421  Sum_probs=58.8

Q ss_pred             eEEEEcCChhHHHHHHHHHHcCCcEEEEEcC--ChhhHHHHHhc----C---C-------------ceEEcCCCCChhHH
Q 018529          172 SVAVFGLGAVGLAAAEGARIAGASRIIGVDR--SSKRFEEAKKF----G---V-------------TDFVNTSEHDRPIQ  229 (354)
Q Consensus       172 ~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~--~~~~~~~~~~l----g---~-------------~~v~~~~~~~~~~~  229 (354)
                      +|.|.|-|-+|.+....+....--.++++..  +.+...++-++    |   .             ..+..+...+    
T Consensus         3 kIgINGfGRIGR~v~R~~l~~~~~~ivaINd~~d~~~~ayll~yDS~hG~~~~~v~~~~~~l~i~g~~i~i~~~~~----   78 (171)
T d3cmco1           3 KVGINGFGRIGRNVFRAALKNPDIEVVAVNDLTDANTLAHLLKYDSVHGRLDAEVSVNGNNLVVNGKEIIVKAERD----   78 (171)
T ss_dssp             EEEEESCSHHHHHHHHHHTTCTTEEEEEEECSSCHHHHHHHHHEETTTEECSSCEEEETTEEEETTEEEEEECCSS----
T ss_pred             EEEEECCCHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHhhhhcccccCCcccccccccCCCEEeCCcceeeEecCC----
Confidence            5778899999999887776443226777732  33444444332    1   0             0111111111    


Q ss_pred             HHHHHHcCC--CccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCC
Q 018529          230 EVIAEMTNG--GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD  276 (354)
Q Consensus       230 ~~i~~~~~~--~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~  276 (354)
                        ..++..+  ++|+|+||+|.....+.+...|..+ .+-|++..+..+
T Consensus        79 --p~~i~W~~~~vDiViEcTG~f~t~~~~~~hl~~g-akkViiSap~~d  124 (171)
T d3cmco1          79 --PENLAWGEIGVDIVVESTGRFTKREDAAKHLEAG-AKKVIISAPAKN  124 (171)
T ss_dssp             --GGGCCTGGGTCCEEEECSSSCCBHHHHTHHHHTT-CSEEEESSCCBS
T ss_pred             --HHHccccccCCcEEEEecCccCCHHHHHHHHhCC-CceEEEeccccc
Confidence              1222222  7999999999877788888889886 666667665543

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=91.57  E-value=0.1  Score=43.56  Aligned_cols=34  Identities=15%  Similarity=0.270  Sum_probs=30.1

Q ss_pred             CCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCCh
Q 018529          170 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  204 (354)
Q Consensus       170 ~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~  204 (354)
                      .++|+|+|||..|+.++..+...|. +|++++.++
T Consensus         2 ~KKI~IIGaG~sGL~aA~~L~k~G~-~V~viEk~~   35 (314)
T d2bi7a1           2 SKKILIVGAGFSGAVIGRQLAEKGH-QVHIIDQRD   35 (314)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHTTTC-EEEEEESSS
T ss_pred             CCEEEEECCcHHHHHHHHHHHhCCC-CEEEEECCC
Confidence            5789999999999999999888898 999997665

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=91.56  E-value=0.29  Score=39.61  Aligned_cols=34  Identities=24%  Similarity=0.268  Sum_probs=29.7

Q ss_pred             CCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCCh
Q 018529          170 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS  204 (354)
Q Consensus       170 ~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~  204 (354)
                      .++|||+|+ |.+|...+..+...|. .|++++++.
T Consensus         3 kkKILVtGatG~iG~~l~~~L~~~G~-~V~~l~R~~   37 (307)
T d1qyca_           3 RSRILLIGATGYIGRHVAKASLDLGH-PTFLLVRES   37 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTC-CEEEECCCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEECCC
Confidence            468999998 9999999999999998 888888754

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=91.53  E-value=0.32  Score=36.42  Aligned_cols=43  Identities=28%  Similarity=0.340  Sum_probs=36.5

Q ss_pred             eEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCC
Q 018529          172 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV  215 (354)
Q Consensus       172 ~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~  215 (354)
                      +|-|+|.|.+|...+.-+...|. .|++.++++++.+.+.+.+.
T Consensus         3 kIGvIGlG~MG~~ma~~L~~~G~-~V~~~dr~~~~~~~l~~~~~   45 (178)
T d1pgja2           3 DVGVVGLGVMGANLALNIAEKGF-KVAVFNRTYSKSEEFMKANA   45 (178)
T ss_dssp             SEEEECCSHHHHHHHHHHHHTTC-CEEEECSSHHHHHHHHHHTT
T ss_pred             EEEEEeehHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHcCC
Confidence            37788999999998888888898 89999999999988866553

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=91.50  E-value=0.18  Score=36.97  Aligned_cols=36  Identities=31%  Similarity=0.359  Sum_probs=30.9

Q ss_pred             CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCC
Q 018529          168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS  203 (354)
Q Consensus       168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~  203 (354)
                      .-+++|+|+|+|.+|.-++..+..+|++.|+.+.+.
T Consensus        43 ~~~~kVvVIGGGdtA~D~A~~a~r~GA~~V~vi~rr   78 (153)
T d1gtea3          43 SIRGAVIVLGAGDTAFDCATSALRCGARRVFLVFRK   78 (153)
T ss_dssp             CCCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSS
T ss_pred             cCCCEEEEECCChhHHHHHHHHHHcCCcceeEEEeC
Confidence            446789999999999999999999999888787553

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=91.47  E-value=0.3  Score=39.80  Aligned_cols=32  Identities=31%  Similarity=0.431  Sum_probs=29.3

Q ss_pred             CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEc
Q 018529          169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVD  201 (354)
Q Consensus       169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~  201 (354)
                      .|.+|+|-|.|.+|..+++++...|+ +|++++
T Consensus        35 ~gktvaIqGfGnVG~~~A~~L~e~Ga-kvv~vs   66 (293)
T d1hwxa1          35 GDKTFAVQGFGNVGLHSMRYLHRFGA-KCVAVG   66 (293)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEE
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEE
Confidence            57899999999999999999999999 888775

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=91.46  E-value=0.13  Score=36.10  Aligned_cols=36  Identities=25%  Similarity=0.358  Sum_probs=31.3

Q ss_pred             CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCCh
Q 018529          168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  204 (354)
Q Consensus       168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~  204 (354)
                      +.+++++|+|+|.+|+-+++.+..+|. +|..+.+++
T Consensus        30 ~~~~~vvIiGgG~iG~E~A~~l~~~g~-~Vtlv~~~~   65 (122)
T d1xhca2          30 ENSGEAIIIGGGFIGLELAGNLAEAGY-HVKLIHRGA   65 (122)
T ss_dssp             HHHSEEEEEECSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             hcCCcEEEECCcHHHHHHHHHhhcccc-eEEEEeccc
Confidence            345789999999999999999999999 888887654

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=91.39  E-value=1.2  Score=31.87  Aligned_cols=38  Identities=21%  Similarity=0.203  Sum_probs=30.1

Q ss_pred             eEEEEcCChhHHHHHHHHHHcC-CcEEEEEcCChhhHHH
Q 018529          172 SVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEE  209 (354)
Q Consensus       172 ~vlI~G~g~~G~~a~~~a~~~g-~~~vi~v~~~~~~~~~  209 (354)
                      +|.|+|+|.+|......+...+ ...++.+|.++++.+.
T Consensus         2 KI~IIGaG~VG~~la~~l~~~~l~~el~L~Di~~~~~~~   40 (142)
T d1guza1           2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVEGIPQG   40 (142)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSSHHHH
T ss_pred             EEEEECcCHHHHHHHHHHHhCCCCceEEEeccccccchh
Confidence            4788899999999887777776 3489999988876543

>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Escherichia coli [TaxId: 562]

Probab=91.39  E-value=0.043  Score=42.04  Aligned_cols=35  Identities=23%  Similarity=0.253  Sum_probs=30.1

Q ss_pred             CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCCh
Q 018529          169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  204 (354)
Q Consensus       169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~  204 (354)
                      ++..|+|+|+|+.|+.|+..|..+|. +|+.+++..
T Consensus         4 k~~dVvIIGGGpaGl~AA~~~ar~g~-~v~iie~~~   38 (190)
T d1trba1           4 KHSKLLILGSGPAGYTAAVYAARANL-QPVLITGME   38 (190)
T ss_dssp             EEEEEEEECCSHHHHHHHHHHHTTTC-CCEEECCSS
T ss_pred             CCCcEEEECCCHHHHHHHHHHHHcCC-ceEEEEeec
Confidence            45679999999999999999999999 888887544

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=91.32  E-value=0.27  Score=34.18  Aligned_cols=89  Identities=12%  Similarity=0.006  Sum_probs=52.1

Q ss_pred             CCCeEEEEcCCh-----------hHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcC
Q 018529          169 RGSSVAVFGLGA-----------VGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTN  237 (354)
Q Consensus       169 ~~~~vlI~G~g~-----------~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~  237 (354)
                      ..++|||+|+|+           .+.-++..++..|+ .++.+.++++....--.+ +++++. ..-..+....+-+.  
T Consensus         3 ~~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~-~~IliN~NPeTVstd~d~-aD~lYf-eplt~e~v~~Ii~~--   77 (121)
T d1a9xa4           3 DREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGY-ETIMVNCNPETVSTDYDT-SDRLYF-EPVTLEDVLEIVRI--   77 (121)
T ss_dssp             SSCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTC-EEEEECCCTTSSTTSTTS-SSEEEC-CCCSHHHHHHHHHH--
T ss_pred             CCCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCC-eEEEEecChhhhhcChhh-cCceEE-ccCCHHHHHHHHHH--
Confidence            357899999874           23344455556699 899999998876543222 234432 22221122222222  


Q ss_pred             CCccEEEEcccChHhHHHHHHHhhC
Q 018529          238 GGVDRSVECTGNIDNMISAFECVHD  262 (354)
Q Consensus       238 ~~~dvv~d~~g~~~~~~~~~~~l~~  262 (354)
                      ++.|.|+-..|++..++.+...-+.
T Consensus        78 E~p~~ii~~~GGQtalnla~~L~~~  102 (121)
T d1a9xa4          78 EKPKGVIVQYGGQTPLKLARALEAA  102 (121)
T ss_dssp             HCCSEEECSSSTHHHHTTHHHHHHT
T ss_pred             hCCCEEEeehhhhhHHHHHHHHHHc
Confidence            2689999999996666665554443

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=91.29  E-value=0.057  Score=46.05  Aligned_cols=31  Identities=16%  Similarity=0.314  Sum_probs=26.2

Q ss_pred             eEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcC
Q 018529          172 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDR  202 (354)
Q Consensus       172 ~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~  202 (354)
                      +|||+|+ |-+|...+..+...|...|++++.
T Consensus         2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~   33 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDK   33 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEEC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeC
Confidence            5899987 999999999888889866777764

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=91.26  E-value=0.18  Score=41.07  Aligned_cols=37  Identities=24%  Similarity=0.215  Sum_probs=27.3

Q ss_pred             eEEEEcC-ChhHHHHHHHHHHcCCcEEEEEc-CChhhHHH
Q 018529          172 SVAVFGL-GAVGLAAAEGARIAGASRIIGVD-RSSKRFEE  209 (354)
Q Consensus       172 ~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~-~~~~~~~~  209 (354)
                      .+||+|+ +++|.+.++.+...|+ +|+.+. +++++.+.
T Consensus         4 VAlITGas~GIG~aiA~~la~~Ga-~V~i~~~~~~~~~~~   42 (284)
T d1e7wa_           4 VALVTGAAKRLGRSIAEGLHAEGY-AVCLHYHRSAAEANA   42 (284)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCCHHHHHH
Confidence            4577787 8999999999999999 666554 45554443

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=91.26  E-value=0.09  Score=42.19  Aligned_cols=33  Identities=27%  Similarity=0.354  Sum_probs=29.0

Q ss_pred             eEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChh
Q 018529          172 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK  205 (354)
Q Consensus       172 ~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~  205 (354)
                      -|+|+|+|+.|++++..|...|. +|++++++++
T Consensus         6 DViIIGaG~aGl~aA~~la~~G~-~V~vlEk~~~   38 (253)
T d2gqfa1           6 ENIIIGAGAAGLFCAAQLAKLGK-SVTVFDNGKK   38 (253)
T ss_dssp             SEEEECCSHHHHHHHHHHHHTTC-CEEEECSSSS
T ss_pred             cEEEECcCHHHHHHHHHHHHCCC-cEEEEecCCC
Confidence            48899999999999988888998 8999988764

>d1jqea_ c.66.1.19 (A:) Histamine methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Histamine methyltransferase
domain: Histamine methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.25  E-value=0.26  Score=40.02  Aligned_cols=105  Identities=11%  Similarity=0.010  Sum_probs=59.1

Q ss_pred             CCCCCCeEEEEcCChhHHHHHHHHHHc-----CCc-EEEEEcCChhhHHHHHhc--C---Cc-eEEcCCCCC-hhHHHHH
Q 018529          166 KPERGSSVAVFGLGAVGLAAAEGARIA-----GAS-RIIGVDRSSKRFEEAKKF--G---VT-DFVNTSEHD-RPIQEVI  232 (354)
Q Consensus       166 ~~~~~~~vlI~G~g~~G~~a~~~a~~~-----g~~-~vi~v~~~~~~~~~~~~l--g---~~-~v~~~~~~~-~~~~~~i  232 (354)
                      ..++.-+||=+|||. |..+..+++.+     +.. .+++++.+++..+.+++.  .   .. ..++..... .++....
T Consensus        37 ~~~~~~~VLDiGcG~-G~~~~~ll~~l~~~~~~~~~~~~~vD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  115 (280)
T d1jqea_          37 DTKSEIKILSIGGGA-GEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKISNLENVKFAWHKETSSEYQSRM  115 (280)
T ss_dssp             TTCSEEEEEEETCTT-SHHHHHHHHHHHHHSTTCEEEEEEECCCHHHHHHHHHHHTTCCSCTTEEEEEECSCHHHHHHHH
T ss_pred             cCCCCCeEEEEcCCC-CHHHHHHHHHhhhhccCCceEEEEEeCcHHHHHHHHHHHhhccccccccccchhhhhhhhcchh
Confidence            345555788889864 44444444432     221 688999999888877652  1   11 122222222 0111111


Q ss_pred             HH-HcCCCccEEEEccc-----C-hHhHHHHHHHhhCCCceEEEEcC
Q 018529          233 AE-MTNGGVDRSVECTG-----N-IDNMISAFECVHDGWGVAVLVGV  272 (354)
Q Consensus       233 ~~-~~~~~~dvv~d~~g-----~-~~~~~~~~~~l~~~~g~~v~~g~  272 (354)
                      .. ...+.||+|+..-.     . ...+..+.+.|+++ |.+++...
T Consensus       116 ~~~~~~~~fD~I~~~~~l~~~~d~~~~l~~l~~~Lkpg-G~l~i~~~  161 (280)
T d1jqea_         116 LEKKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTN-AKMLIIVV  161 (280)
T ss_dssp             TTSSSCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEE-EEEEEEEE
T ss_pred             cccCCCCceeEEEEccceecCCCHHHHHHHHHhhCCCC-CEEEEEEe
Confidence            11 22338999987322     2 25788899999997 98776643

>d1tw3a2 c.66.1.12 (A:99-351) Carminomycin 4-O-methyltransferase {Streptomyces peucetius [TaxId: 1950]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Plant O-methyltransferase, C-terminal domain
domain: Carminomycin 4-O-methyltransferase
species: Streptomyces peucetius [TaxId: 1950]

Probab=91.22  E-value=0.23  Score=39.69  Aligned_cols=101  Identities=19%  Similarity=0.066  Sum_probs=61.5

Q ss_pred             hhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH----HhcCC-ceEEcCCCCChhHHHHHHHHc
Q 018529          162 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGV-TDFVNTSEHDRPIQEVIAEMT  236 (354)
Q Consensus       162 ~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~----~~lg~-~~v~~~~~~~~~~~~~i~~~~  236 (354)
                      .....+....+||=+|+|. |..+..+++....-++++++.. +..+.+    .+.|. +++- ....+  +.    +..
T Consensus        73 ~~~~d~~~~~~VLDvGcG~-G~~~~~la~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~~~rv~-~~~~D--~~----~~~  143 (253)
T d1tw3a2          73 AAAYDWTNVRHVLDVGGGK-GGFAAAIARRAPHVSATVLEMA-GTVDTARSYLKDEGLSDRVD-VVEGD--FF----EPL  143 (253)
T ss_dssp             HHHSCCTTCSEEEEETCTT-SHHHHHHHHHCTTCEEEEEECT-THHHHHHHHHHHTTCTTTEE-EEECC--TT----SCC
T ss_pred             HhhcCCccCCEEEEeCCCC-CHHHHHHHHhcceeEEEEccCH-HHHHHHHHHHHHhhcccchh-hcccc--ch----hhc
Confidence            3455677788999999874 7888889988743388888863 333333    33343 2221 11111  10    011


Q ss_pred             CCCccEEEEccc-----Ch---HhHHHHHHHhhCCCceEEEEcC
Q 018529          237 NGGVDRSVECTG-----NI---DNMISAFECVHDGWGVAVLVGV  272 (354)
Q Consensus       237 ~~~~dvv~d~~g-----~~---~~~~~~~~~l~~~~g~~v~~g~  272 (354)
                      .+++|+|+-..-     .+   ..+..+.+.|+++ |++++...
T Consensus       144 ~~~~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkPG-G~l~i~e~  186 (253)
T d1tw3a2         144 PRKADAIILSFVLLNWPDHDAVRILTRCAEALEPG-GRILIHER  186 (253)
T ss_dssp             SSCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEE-EEEEEEEC
T ss_pred             ccchhheeeccccccCCchhhHHHHHHHHHhcCCC-cEEEEEec
Confidence            237899885421     11   3577888999997 99988754

>d1lqta2 c.4.1.1 (A:2-108,A:325-456) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Ferredoxin:NADP reductase FprA
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=91.21  E-value=0.25  Score=38.64  Aligned_cols=34  Identities=18%  Similarity=0.155  Sum_probs=27.3

Q ss_pred             CeEEEEcCChhHHHHHHHHHHcCCc------EEEEEcCCh
Q 018529          171 SSVAVFGLGAVGLAAAEGARIAGAS------RIIGVDRSS  204 (354)
Q Consensus       171 ~~vlI~G~g~~G~~a~~~a~~~g~~------~vi~v~~~~  204 (354)
                      -+|+|+|+|+.|++|+..+...|..      .|.+.+..+
T Consensus         3 ~~VaVIGaGpaGL~aA~~L~~~G~~~~~~~~~V~v~E~~~   42 (239)
T d1lqta2           3 YYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLP   42 (239)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSS
T ss_pred             cEEEEECcCHHHHHHHHHHHHcCCccccCCCceEEEecCC
Confidence            3799999999999999888777621      788887655

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=91.11  E-value=0.11  Score=41.94  Aligned_cols=41  Identities=22%  Similarity=0.263  Sum_probs=31.8

Q ss_pred             CCCeEEEEcC-ChhHHHHH-HHHHH--cCCcEEEEEcCChhhHHHH
Q 018529          169 RGSSVAVFGL-GAVGLAAA-EGARI--AGASRIIGVDRSSKRFEEA  210 (354)
Q Consensus       169 ~~~~vlI~G~-g~~G~~a~-~~a~~--~g~~~vi~v~~~~~~~~~~  210 (354)
                      .|+.+||+|+ +++|.+.+ ++|+.  .|+ +|+.+++++++.+.+
T Consensus         5 ~gKvalITGas~GIG~aiA~~lA~~~~~G~-~Vv~~~r~~~~l~~~   49 (259)
T d1oaaa_           5 GCAVCVLTGASRGFGRALAPQLARLLSPGS-VMLVSARSESMLRQL   49 (259)
T ss_dssp             BSEEEEESSCSSHHHHHHHHHHHTTBCTTC-EEEEEESCHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHhcccCCC-EEEEEECCHHHHHHH
Confidence            4667788887 89999755 45653  588 999999999887765

>d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains
species: Escherichia coli [TaxId: 562]

Probab=91.05  E-value=0.094  Score=39.56  Aligned_cols=29  Identities=31%  Similarity=0.273  Sum_probs=26.2

Q ss_pred             EEEEcCChhHHHHHHHHHHcCCcEEEEEcC
Q 018529          173 VAVFGLGAVGLAAAEGARIAGASRIIGVDR  202 (354)
Q Consensus       173 vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~  202 (354)
                      |+|+|+|+.|+.|+..|...|. +|+.+++
T Consensus         4 ViIIGgGpaGl~AAi~aar~G~-~v~iie~   32 (184)
T d1fl2a1           4 VLIVGSGPAGAAAAIYSARKGI-RTGLMGE   32 (184)
T ss_dssp             EEEECCSHHHHHHHHHHHTTTC-CEEEECS
T ss_pred             EEEECcCHHHHHHHHHHHHcCC-eEEEEEE
Confidence            7889999999999999999999 7888864

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=91.00  E-value=0.099  Score=41.65  Aligned_cols=32  Identities=44%  Similarity=0.597  Sum_probs=27.9

Q ss_pred             EEEEcCChhHHHHHHHHHHcCCcEEEEEcCChh
Q 018529          173 VAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK  205 (354)
Q Consensus       173 vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~  205 (354)
                      |+|+|+|+.|+.++..+...|. +|+++++++.
T Consensus         5 ViIIGaG~aGl~aA~~la~~G~-~V~liEk~~~   36 (251)
T d2i0za1           5 VIVIGGGPSGLMAAIGAAEEGA-NVLLLDKGNK   36 (251)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTC-CEEEECSSSS
T ss_pred             EEEECcCHHHHHHHHHHHHCCC-cEEEEeCCCC
Confidence            7889999999998888888899 9999987653

>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=90.97  E-value=0.096  Score=40.82  Aligned_cols=31  Identities=26%  Similarity=0.349  Sum_probs=27.3

Q ss_pred             EEEEcCChhHHHHHHHHHHcCCcEEEEEcCCh
Q 018529          173 VAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  204 (354)
Q Consensus       173 vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~  204 (354)
                      |+|+|+|+.|+.++..+..+|. +|++++..+
T Consensus         6 vvVIGgGpaGl~aA~~aa~~G~-kV~vie~~~   36 (221)
T d1dxla1           6 VVIIGGGPGGYVAAIKAAQLGF-KTTCIEKRG   36 (221)
T ss_dssp             EEEECCSHHHHHHHHHHHHHTC-CEEEEECSS
T ss_pred             EEEECCCHHHHHHHHHHHHCCC-cEEEEEecC
Confidence            7788999999999999999999 888887653

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.96  E-value=0.15  Score=44.34  Aligned_cols=34  Identities=24%  Similarity=0.390  Sum_probs=29.9

Q ss_pred             CeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCCh
Q 018529          171 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  204 (354)
Q Consensus       171 ~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~  204 (354)
                      .+|||+|+|++|...+..+-..|.+.+..+|.+.
T Consensus        38 ~kVlvvG~GglG~ei~k~L~~~Gvg~i~lvD~D~   71 (426)
T d1yovb1          38 CKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDT   71 (426)
T ss_dssp             CCEEEECSSTTHHHHHHHHHTTTCCCEEEECCCB
T ss_pred             CeEEEECCCHHHHHHHHHHHHcCCCeEEEEECCC
Confidence            5799999999999999999999998999997543

>d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia carotovora [TaxId: 554]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein ECA1738
species: Erwinia carotovora [TaxId: 554]

Probab=90.94  E-value=0.15  Score=40.02  Aligned_cols=95  Identities=14%  Similarity=0.036  Sum_probs=57.3

Q ss_pred             cCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHc-CCCccEE
Q 018529          165 AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMT-NGGVDRS  243 (354)
Q Consensus       165 ~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~-~~~~dvv  243 (354)
                      .+..++++||=+|||. |..+..+++ .|. +|++++.+++..+.+++...+.+-.... +  +    .... ++.||+|
T Consensus        16 ~~~~~~~~VLDiGcG~-G~~~~~l~~-~g~-~v~giD~s~~~i~~a~~~~~~~~~~~~~-~--~----~~~~~~~~fD~I   85 (225)
T d2p7ia1          16 TPFFRPGNLLELGSFK-GDFTSRLQE-HFN-DITCVEASEEAISHAQGRLKDGITYIHS-R--F----EDAQLPRRYDNI   85 (225)
T ss_dssp             GGGCCSSCEEEESCTT-SHHHHHHTT-TCS-CEEEEESCHHHHHHHHHHSCSCEEEEES-C--G----GGCCCSSCEEEE
T ss_pred             hhhCCCCcEEEEeCCC-cHHHHHHHH-cCC-eEEEEeCcHHHhhhhhcccccccccccc-c--c----cccccccccccc
Confidence            3445577899999875 666666654 476 8999999999999987643322211111 1  1    1111 2379999


Q ss_pred             EEcc-----cCh-HhHHHHH-HHhhCCCceEEEE
Q 018529          244 VECT-----GNI-DNMISAF-ECVHDGWGVAVLV  270 (354)
Q Consensus       244 ~d~~-----g~~-~~~~~~~-~~l~~~~g~~v~~  270 (354)
                      +..-     ..+ ..+..+. ++|+++ |.+++.
T Consensus        86 ~~~~vleh~~d~~~~l~~i~~~~Lk~g-G~l~i~  118 (225)
T d2p7ia1          86 VLTHVLEHIDDPVALLKRINDDWLAEG-GRLFLV  118 (225)
T ss_dssp             EEESCGGGCSSHHHHHHHHHHTTEEEE-EEEEEE
T ss_pred             cccceeEecCCHHHHHHHHHHHhcCCC-ceEEEE
Confidence            8532     121 2345555 578896 877654

>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methyltransferase SPy1538
species: Streptococcus pyogenes [TaxId: 1314]

Probab=90.83  E-value=0.4  Score=34.90  Aligned_cols=70  Identities=17%  Similarity=0.156  Sum_probs=44.2

Q ss_pred             CCCeEEEEcC--ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCce-EEcCCCCChhHHHHHHHHcCCCcc
Q 018529          169 RGSSVAVFGL--GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD-FVNTSEHDRPIQEVIAEMTNGGVD  241 (354)
Q Consensus       169 ~~~~vlI~G~--g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~~-v~~~~~~~~~~~~~i~~~~~~~~d  241 (354)
                      +|.+||=.++  |.+|+   .. ...|+++|+.++.+++..+.+++    ++... +..... +  ..+.++. ..+.+|
T Consensus        14 ~g~~vlDl~~GtG~~~i---ea-~~rga~~v~~ve~~~~a~~~~~~n~~~~~~~~~~~ii~~-D--~~~~l~~-~~~~fD   85 (152)
T d2esra1          14 NGGRVLDLFAGSGGLAI---EA-VSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKM-E--AERAIDC-LTGRFD   85 (152)
T ss_dssp             CSCEEEEETCTTCHHHH---HH-HHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECS-C--HHHHHHH-BCSCEE
T ss_pred             CCCeEEEcCCccCHHHH---HH-HHhCcceeeeehhchhhhhhhhhhhhhcccccchhhhcc-c--ccccccc-cccccc
Confidence            5778887754  55555   33 34688899999999988776644    56532 322222 2  4454543 345899


Q ss_pred             EEEEc
Q 018529          242 RSVEC  246 (354)
Q Consensus       242 vv~d~  246 (354)
                      +||--
T Consensus        86 iIf~D   90 (152)
T d2esra1          86 LVFLD   90 (152)
T ss_dssp             EEEEC
T ss_pred             eeEec
Confidence            99853

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=90.77  E-value=0.17  Score=38.39  Aligned_cols=84  Identities=25%  Similarity=0.360  Sum_probs=56.9

Q ss_pred             CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEccc
Q 018529          169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  248 (354)
Q Consensus       169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g  248 (354)
                      .|.+|.|+|.|.+|...+++++.+|. +|++.+++...       +.....   + +  +.+.++     ..|+|+.++.
T Consensus        41 ~gk~vgIiG~G~IG~~va~~l~~~g~-~v~~~d~~~~~-------~~~~~~---~-~--l~ell~-----~sDiv~~~~p  101 (181)
T d1qp8a1          41 QGEKVAVLGLGEIGTRVGKILAALGA-QVRGFSRTPKE-------GPWRFT---N-S--LEEALR-----EARAAVCALP  101 (181)
T ss_dssp             TTCEEEEESCSTHHHHHHHHHHHTTC-EEEEECSSCCC-------SSSCCB---S-C--SHHHHT-----TCSEEEECCC
T ss_pred             cCceEEEeccccccccceeeeecccc-ccccccccccc-------cceeee---e-c--hhhhhh-----ccchhhcccc
Confidence            58899999999999999999999999 99999876431       111111   1 1  333222     3799988765


Q ss_pred             Ch-Hh----HHHHHHHhhCCCceEEEEcC
Q 018529          249 NI-DN----MISAFECVHDGWGVAVLVGV  272 (354)
Q Consensus       249 ~~-~~----~~~~~~~l~~~~g~~v~~g~  272 (354)
                      -. ++    -...++.|+++ ..++.++.
T Consensus       102 l~~~t~~li~~~~l~~mk~~-ailIN~~R  129 (181)
T d1qp8a1         102 LNKHTRGLVKYQHLALMAED-AVFVNVGR  129 (181)
T ss_dssp             CSTTTTTCBCHHHHTTSCTT-CEEEECSC
T ss_pred             cccccccccccceeeecccc-ceEEeccc
Confidence            32 11    24667778886 77777754

>d1z7wa1 c.79.1.1 (A:3-322) O-acetylserine sulfhydrylase (Cysteine synthase) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=90.56  E-value=1.6  Score=35.92  Aligned_cols=109  Identities=21%  Similarity=0.110  Sum_probs=67.9

Q ss_pred             hhhcCCCCCCeEEEE-cCChhHHHHHHHHHHcCCcEEEEEc--CChhhHHHHHhcCCceEEcCCCC--------------
Q 018529          162 LNVAKPERGSSVAVF-GLGAVGLAAAEGARIAGASRIIGVD--RSSKRFEEAKKFGVTDFVNTSEH--------------  224 (354)
Q Consensus       162 ~~~~~~~~~~~vlI~-G~g~~G~~a~~~a~~~g~~~vi~v~--~~~~~~~~~~~lg~~~v~~~~~~--------------  224 (354)
                      .+...++++...+|. .+|..|.+...+|+.+|.+-++++.  .++.|.+.++.+|++.+......              
T Consensus        56 ~~~g~~~~~~~~vv~aSsGN~g~a~A~~a~~~g~~~~iv~p~~~~~~k~~~i~~~Ga~vi~~~~~~~~~~~~~~~~~~~~  135 (320)
T d1z7wa1          56 EKKGLIKPGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSTERRIILLAFGVELVLTDPAKGMKGAIAKAEEILA  135 (320)
T ss_dssp             HHTTSCCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHH
T ss_pred             HHcCCCCCCCceEEeeCCchHHHHHHHHHHhhccceEEeehhhhhhhhhhhhhccCcceEEeeccccccccchhHHHHHH
Confidence            345566677666665 5699999999999999995444442  35678888999998755321110              


Q ss_pred             ------------C--------hhHHHHHHHHcCCCccEEEEcccChHhHHHHH---HHhhCCCceEEEEc
Q 018529          225 ------------D--------RPIQEVIAEMTNGGVDRSVECTGNIDNMISAF---ECVHDGWGVAVLVG  271 (354)
Q Consensus       225 ------------~--------~~~~~~i~~~~~~~~dvv~d~~g~~~~~~~~~---~~l~~~~g~~v~~g  271 (354)
                                  +        .....++.+...+.+|.++-++|+-.++.-.+   +...+. -+++-+.
T Consensus       136 ~~~~~~~~~~~~~~~n~~~g~~t~~~EI~~q~~~~~D~vv~~vGgGg~~~Gi~~~~k~~~~~-~~~igve  204 (320)
T d1z7wa1         136 KTPNGYMLQQFENPANPKIHYETTGPEIWKGTGGKIDGFVSGIGTGGTITGAGKYLKEQNAN-VKLYGVE  204 (320)
T ss_dssp             HCTTEEECCTTTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHHHCTT-CEEEEEE
T ss_pred             hCCCceecccccccchHHHhhhhHHHHHHHhccCCCCEEEeCCCCCcccchhhhhhhhhhcc-eeeeccc
Confidence                        0        01222344444457899999988755555443   444554 5555443

>d1sqga2 c.66.1.38 (A:145-428) Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: NOL1/NOP2/sun
domain: Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=90.55  E-value=0.55  Score=38.19  Aligned_cols=101  Identities=16%  Similarity=0.275  Sum_probs=59.5

Q ss_pred             hcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH----HhcCCceEEcCCCCChhHHHHHHHHcCCC
Q 018529          164 VAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTDFVNTSEHDRPIQEVIAEMTNGG  239 (354)
Q Consensus       164 ~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~----~~lg~~~v~~~~~~~~~~~~~i~~~~~~~  239 (354)
                      ...+++|++||=.-|++=|..+ ++|....-..|++++.++.|.+.+    +++|...++....... .   ......+.
T Consensus        97 ~L~~~~g~~vLD~CAaPGgKt~-~la~l~~~~~i~a~d~~~~R~~~l~~~~~r~g~~~~~~~~~~~~-~---~~~~~~~~  171 (284)
T d1sqga2          97 WLAPQNGEHILDLCAAPGGKTT-HILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRY-P---SQWCGEQQ  171 (284)
T ss_dssp             HHCCCTTCEEEEESCTTCHHHH-HHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTC-T---HHHHTTCC
T ss_pred             ccCccccceeEeccCccccchh-hhhhhhhhhhhhhhhcchhhhhhHhhhhhcccccceeeeccccc-c---chhccccc
Confidence            3467899999887444334332 333333324899999999998766    4578764433222210 1   11122347


Q ss_pred             ccEEE-E--cccCh-------------------------HhHHHHHHHhhCCCceEEEE
Q 018529          240 VDRSV-E--CTGNI-------------------------DNMISAFECVHDGWGVAVLV  270 (354)
Q Consensus       240 ~dvv~-d--~~g~~-------------------------~~~~~~~~~l~~~~g~~v~~  270 (354)
                      ||.|+ |  |+|..                         ..+..+++.++++ |++|..
T Consensus       172 fd~IL~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lk~g-G~lvYs  229 (284)
T d1sqga2         172 FDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTG-GTLVYA  229 (284)
T ss_dssp             EEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEE-EEEEEE
T ss_pred             ccEEEEeccccccCccccccchhhccccchhhHHHHHHHHHHHHHHHhcCCC-ceEEEe
Confidence            99886 4  44431                         3566677778886 877754

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=90.45  E-value=0.14  Score=41.00  Aligned_cols=34  Identities=26%  Similarity=0.435  Sum_probs=28.6

Q ss_pred             CeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChh
Q 018529          171 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSK  205 (354)
Q Consensus       171 ~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~  205 (354)
                      +.|||+|+ +++|.+.++.+...|+ +|+.++++++
T Consensus         2 kVvlITGas~GIG~aiA~~la~~Ga-~V~~~~~~~~   36 (257)
T d1fjha_           2 SIIVISGCATGIGAATRKVLEAAGH-QIVGIDIRDA   36 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSSS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECChH
Confidence            35788987 9999999999889999 8988887653

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=90.45  E-value=1.9  Score=30.70  Aligned_cols=36  Identities=28%  Similarity=0.389  Sum_probs=26.9

Q ss_pred             CeEEEEcCChhHHHHHHHHHHcCC-cEEEEEcCChhh
Q 018529          171 SSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKR  206 (354)
Q Consensus       171 ~~vlI~G~g~~G~~a~~~a~~~g~-~~vi~v~~~~~~  206 (354)
                      .+|.|+|+|.+|...+..+...+. ..++.++.++++
T Consensus         2 ~KI~IIGaG~VG~~~a~~l~~~~l~~el~L~D~~~~~   38 (142)
T d1y6ja1           2 SKVAIIGAGFVGASAAFTMALRQTANELVLIDVFKEK   38 (142)
T ss_dssp             CCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC---
T ss_pred             CeEEEECCCHHHHHHHHHHHhcCCCCEEEEEeccCCc
Confidence            368888999999998888777764 479999877765

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=90.31  E-value=0.28  Score=35.97  Aligned_cols=41  Identities=20%  Similarity=0.192  Sum_probs=33.4

Q ss_pred             CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHH
Q 018529          168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFE  208 (354)
Q Consensus       168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~  208 (354)
                      ++..+|.|+|+|.+|...+.++...+...++.++.++++.+
T Consensus         5 ~k~~KI~IIGaG~VG~~lA~~l~~~~~~el~L~D~~~~~~~   45 (154)
T d1pzga1           5 QRRKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKGMPE   45 (154)
T ss_dssp             SCCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHH
T ss_pred             cCCCcEEEECCCHHHHHHHHHHHhCCCceEEEEEeccccch
Confidence            55688999999999988888878778668999988876543

>d2b4ro1 c.2.1.3 (O:4-152,O:319-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=90.27  E-value=0.92  Score=33.47  Aligned_cols=96  Identities=20%  Similarity=0.284  Sum_probs=60.7

Q ss_pred             eEEEEcCChhHHHHHHHHHHc-CCcEEEEEcC---ChhhHHHHHhc----CC---ce------E-Ec------CCCCChh
Q 018529          172 SVAVFGLGAVGLAAAEGARIA-GASRIIGVDR---SSKRFEEAKKF----GV---TD------F-VN------TSEHDRP  227 (354)
Q Consensus       172 ~vlI~G~g~~G~~a~~~a~~~-g~~~vi~v~~---~~~~~~~~~~l----g~---~~------v-~~------~~~~~~~  227 (354)
                      +|.|.|-|-+|.+....+... .. .|+++..   +.+...++-++    |.   ..      + ++      +...+  
T Consensus         2 kigINGfGRIGR~v~R~~~~~~~~-~iv~INd~~~d~~~~ayLlkyDS~hG~~~~~v~~~~~~l~i~~~~I~i~~~~~--   78 (166)
T d2b4ro1           2 KLGINGFGRIGRLVFRAAFGRKDI-EVVAINDPFMDLNHLCYLLKYDSVHGQFPCEVTHADGFLLIGEKKVSVFAEKD--   78 (166)
T ss_dssp             EEEEECCSHHHHHHHHHHHTCSSE-EEEEEECTTCCHHHHHHHHHCCTTTCSCSSCEEEETTEEEESSCEEEEECCSS--
T ss_pred             eEEEECCCHHHHHHHHHHhhCCCc-EEEEECCCCCChHHhhhhhhcccccccceeeeccCCceEEecCcEEEEEeCCC--
Confidence            578999999999999888755 34 6777732   34666666443    11   10      1 11      11111  


Q ss_pred             HHHHHHHHcCC--CccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCC
Q 018529          228 IQEVIAEMTNG--GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSK  275 (354)
Q Consensus       228 ~~~~i~~~~~~--~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~  275 (354)
                          ..++.+.  ++|+|+||+|.-...+.+...+..+ .+-|++..+..
T Consensus        79 ----p~~i~W~~~gvdiViEcTG~f~~~~~~~~hl~~g-akkViiSAP~k  123 (166)
T d2b4ro1          79 ----PSQIPWGKCQVDVVCESTGVFLTKELASSHLKGG-AKKVIMSAPPK  123 (166)
T ss_dssp             ----GGGCCHHHHTCSEEEECSSSCCSHHHHTHHHHTT-CSEEEESSCCS
T ss_pred             ----hHHccccccCCCEEEEecccccchhhhhhhhccC-CCEEEEecccc
Confidence                1111111  7999999999877778888899886 66677766553

>d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein PH1948
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=90.21  E-value=0.75  Score=35.19  Aligned_cols=46  Identities=22%  Similarity=0.312  Sum_probs=32.9

Q ss_pred             cCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh
Q 018529          165 AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK  212 (354)
Q Consensus       165 ~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~  212 (354)
                      .+--.|++||=.|+|. |.+++.++ ..|+.+|++++.+++..+.+++
T Consensus        42 ~~dl~g~~vLDlg~Gt-G~l~i~a~-~~g~~~v~~vdi~~~~~~~a~~   87 (201)
T d1wy7a1          42 LGDIEGKVVADLGAGT-GVLSYGAL-LLGAKEVICVEVDKEAVDVLIE   87 (201)
T ss_dssp             TTSSTTCEEEEETCTT-CHHHHHHH-HTTCSEEEEEESCHHHHHHHHH
T ss_pred             cCCCCCCEEEECcCcc-hHHHHHHH-HcCCCEEEEEcCcHHHHHHHHH
Confidence            3444688998888753 44445444 4677699999999998888764

>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=90.17  E-value=0.12  Score=40.24  Aligned_cols=30  Identities=20%  Similarity=0.313  Sum_probs=27.1

Q ss_pred             EEEEcCChhHHHHHHHHHHcCCcEEEEEcCC
Q 018529          173 VAVFGLGAVGLAAAEGARIAGASRIIGVDRS  203 (354)
Q Consensus       173 vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~  203 (354)
                      |+|+|+|+.|+.++..|..+|. +|..+++.
T Consensus         5 vvVIG~G~aG~~aA~~a~~~G~-kV~iiE~~   34 (217)
T d1gesa1           5 YIAIGGGSGGIASINRAAMYGQ-KCALIEAK   34 (217)
T ss_dssp             EEEECCSHHHHHHHHHHHTTTC-CEEEEESS
T ss_pred             EEEECCCHHHHHHHHHHHHCCC-EEEEEecc
Confidence            6888999999999999999999 88888764

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=90.12  E-value=0.27  Score=37.88  Aligned_cols=40  Identities=35%  Similarity=0.591  Sum_probs=34.5

Q ss_pred             eEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh
Q 018529          172 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK  212 (354)
Q Consensus       172 ~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~  212 (354)
                      +|.|+|+|-+|+..+..+-..|. .|+++|.++++.+.+.+
T Consensus         2 kI~ViGlG~vGl~~a~~la~~g~-~V~g~D~n~~~i~~ln~   41 (202)
T d1mv8a2           2 RISIFGLGYVGAVCAGCLSARGH-EVIGVDVSSTKIDLINQ   41 (202)
T ss_dssp             EEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHT
T ss_pred             EEEEECCCHhHHHHHHHHHhCCC-cEEEEeCCHHHHHHhcc
Confidence            47889999999987777777888 99999999999888765

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=90.10  E-value=0.14  Score=40.42  Aligned_cols=31  Identities=19%  Similarity=0.396  Sum_probs=27.7

Q ss_pred             EEEEcCChhHHHHHHHHHHcCCcEEEEEcCCh
Q 018529          173 VAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  204 (354)
Q Consensus       173 vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~  204 (354)
                      |+|+|+|..|+.++..+...|. +|.++++++
T Consensus         8 viViGaG~~Gl~~A~~La~~G~-~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLGTGITECILSGLLSVDGK-KVLHIDKQD   38 (297)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred             EEEECcCHHHHHHHHHHHHCCC-CEEEEcCCC
Confidence            7888999999998888888898 999998865

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=90.00  E-value=0.38  Score=35.58  Aligned_cols=94  Identities=17%  Similarity=0.243  Sum_probs=60.8

Q ss_pred             hcccchhhhhhhhhhhcC-CCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCCh
Q 018529          149 ILSCGVSTGLGATLNVAK-PERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDR  226 (354)
Q Consensus       149 ~l~~~~~~a~~~l~~~~~-~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~  226 (354)
                      .+||+...-+.. ++..+ --.|++|+|+|- ..+|.-...++...|+ .|+.+.+....                    
T Consensus        16 ~~PcTp~aI~~l-L~~y~i~l~GK~v~VIGrS~~VG~Pla~lL~~~ga-tVt~~h~~t~~--------------------   73 (166)
T d1b0aa1          16 LRPCTPRGIVTL-LERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGC-TTTVTHRFTKN--------------------   73 (166)
T ss_dssp             SCCHHHHHHHHH-HHHTTCCCTTCEEEEECCCTTTHHHHHHHHHTTTC-EEEEECSSCSC--------------------
T ss_pred             CCCchHHHHHHH-HHHcCcccccceEEEEeccccccHHHHHHHHHhhc-cccccccccch--------------------
Confidence            455444443433 33333 356999999996 6799999999999999 78777543321                    


Q ss_pred             hHHHHHHHHcCCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCC
Q 018529          227 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVP  273 (354)
Q Consensus       227 ~~~~~i~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~  273 (354)
                       ..+.+++     +|+++-++|.+..+.  -+.++++ ..++.+|..
T Consensus        74 -l~~~~~~-----ADivI~a~G~p~~i~--~~~vk~g-~vvIDvGi~  111 (166)
T d1b0aa1          74 -LRHHVEN-----ADLLIVAVGKPGFIP--GDWIKEG-AIVIDVGIN  111 (166)
T ss_dssp             -HHHHHHH-----CSEEEECSCCTTCBC--TTTSCTT-CEEEECCCE
T ss_pred             -hHHHHhh-----hhHhhhhccCccccc--ccccCCC-cEEEecCce
Confidence             3333333     699999999876543  2355665 667766653

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=89.99  E-value=0.11  Score=42.41  Aligned_cols=32  Identities=38%  Similarity=0.472  Sum_probs=28.4

Q ss_pred             eEEEEcCChhHHHHHHHHHHcCCcEEEEEcCCh
Q 018529          172 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  204 (354)
Q Consensus       172 ~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~  204 (354)
                      +|+|+|+|..|+.++..+...|. +|+++++++
T Consensus         2 ~V~IIGaG~aGL~aA~~L~~~G~-~V~vlE~~~   33 (347)
T d2ivda1           2 NVAVVGGGISGLAVAHHLRSRGT-DAVLLESSA   33 (347)
T ss_dssp             CEEEECCBHHHHHHHHHHHTTTC-CEEEECSSS
T ss_pred             eEEEECCCHHHHHHHHHHHhCCC-CEEEEecCC
Confidence            48999999999999999999999 899997653

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.97  E-value=0.31  Score=40.75  Aligned_cols=30  Identities=27%  Similarity=0.199  Sum_probs=26.7

Q ss_pred             CeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEc
Q 018529          171 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVD  201 (354)
Q Consensus       171 ~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~  201 (354)
                      ++|||+|+ |-+|...+..+...|. .|++++
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~-~V~~ld   33 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGY-LPVVID   33 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTC-CEEEEE
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcC-EEEEEE
Confidence            68999987 9999999999999998 888875

>d1fcja_ c.79.1.1 (A:) O-acetylserine sulfhydrylase (Cysteine synthase) {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Salmonella typhimurium [TaxId: 90371]

Probab=89.88  E-value=2.1  Score=34.68  Aligned_cols=100  Identities=18%  Similarity=0.142  Sum_probs=64.5

Q ss_pred             hhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEc--CChhhHHHHHhcCCceEEcCCC----------------
Q 018529          162 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVD--RSSKRFEEAKKFGVTDFVNTSE----------------  223 (354)
Q Consensus       162 ~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~--~~~~~~~~~~~lg~~~v~~~~~----------------  223 (354)
                      .+...++++..|+..++|..|.+....|+.+|.+-++.+.  .++.+...++.+|++.+.....                
T Consensus        53 ~~~g~~~~~~~vv~assGn~g~a~A~~a~~~g~~~~i~~p~~~~~~k~~~~~~~ga~v~~~~~~~~~~~~~~~~~~~~~~  132 (302)
T d1fcja_          53 EKRGVLKPGVELVEPTNGNTGIALAYVAAARGYKLTLTMPETMSIERRKLLKALGANLVLTEGAKGMKGAIQKAEEIVAS  132 (302)
T ss_dssp             HHHTCCCTTCEEEEECSSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHT
T ss_pred             HHcCCCCCCceEEEeccccchhHHHHHHHHhccCCceEEeecCcHHHHHHHHHhccceEEeccccccchhhhHHHHHHhh
Confidence            3455677777766667799999999999999986444443  3556777888888865431111                


Q ss_pred             ----------C-C--------hhHHHHHHHHcCCCccEEEEcccChHhHHHHHHHhh
Q 018529          224 ----------H-D--------RPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVH  261 (354)
Q Consensus       224 ----------~-~--------~~~~~~i~~~~~~~~dvv~d~~g~~~~~~~~~~~l~  261 (354)
                                . +        .....++.+..++.+|+++-++|+-.++.-....++
T Consensus       133 ~~~~~~~~~~~~~~~~~~~~~~ti~~Ei~e~~~~~~d~vv~~vG~GG~~~Gi~~~lk  189 (302)
T d1fcja_         133 DPQKYLLLQQFSNPANPEIHEKTTGPEIWEDTDGQVDVFISGVGTGGTLTGVTRYIK  189 (302)
T ss_dssp             STTTEEECCTTTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHH
T ss_pred             hccceeccccccccchhHHHHhHHHHHHHHhcCCCCCEEEEcCCCccccccceeeee
Confidence                      0 0        012234444444568999999987666665555544

>d2cl5a1 c.66.1.1 (A:3-216) Catechol O-methyltransferase, COMT {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Catechol O-methyltransferase, COMT
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=89.76  E-value=0.11  Score=40.69  Aligned_cols=98  Identities=16%  Similarity=0.152  Sum_probs=56.9

Q ss_pred             CCCCCeEEEEcCChhHHHHHHHHHHcCC-cEEEEEcCChhhHHHHH----hcCCceEEcCCCCChhHHHHHHHH---cC-
Q 018529          167 PERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAK----KFGVTDFVNTSEHDRPIQEVIAEM---TN-  237 (354)
Q Consensus       167 ~~~~~~vlI~G~g~~G~~a~~~a~~~g~-~~vi~v~~~~~~~~~~~----~lg~~~v~~~~~~~~~~~~~i~~~---~~-  237 (354)
                      ..+.++||=+|++ .|..++.+|+++.. .+|++++.+++..+.++    +.|...-+.....+  ..+.+.++   .. 
T Consensus        54 ~~kpk~ILEiGt~-~G~Sti~la~al~~~g~v~sid~~~~~~~~a~~~~~~~gl~~~i~l~~Gd--~~e~l~~l~~~~~~  130 (214)
T d2cl5a1          54 EYSPSLVLELGAY-CGYSAVRMARLLQPGARLLTMEMNPDYAAITQQMLNFAGLQDKVTILNGA--SQDLIPQLKKKYDV  130 (214)
T ss_dssp             HHCCSEEEEECCT-TSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESC--HHHHGGGHHHHSCC
T ss_pred             hhCCCEEEEEccC-chhHHHHHHHhCCCccEEEEEeccHHHHHHHHHHHHHcCCCccceeeecc--ccccccchhhcccc
Confidence            3445788888875 37778888887632 29999999998877764    35653212222222  33333332   22 


Q ss_pred             CCccEEEEcccChH-----hHHHHHHHhhCCCceEE
Q 018529          238 GGVDRSVECTGNID-----NMISAFECVHDGWGVAV  268 (354)
Q Consensus       238 ~~~dvv~d~~g~~~-----~~~~~~~~l~~~~g~~v  268 (354)
                      +.+|+||--.....     .+..+++.|+++ |.++
T Consensus       131 ~~~D~ifiD~~~~~~~~~~~l~~~~~lLkpG-GvIv  165 (214)
T d2cl5a1         131 DTLDMVFLDHWKDRYLPDTLLLEKCGLLRKG-TVLL  165 (214)
T ss_dssp             CCEEEEEECSCGGGHHHHHHHHHHTTCEEEE-EEEE
T ss_pred             cccceeeecccccccccHHHHHHHhCccCCC-cEEE
Confidence            37998874322211     133455568885 7544

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.75  E-value=0.66  Score=34.42  Aligned_cols=95  Identities=18%  Similarity=0.253  Sum_probs=61.6

Q ss_pred             hhcccchhhhhhhhhhhcCC-CCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCC
Q 018529          148 CILSCGVSTGLGATLNVAKP-ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHD  225 (354)
Q Consensus       148 a~l~~~~~~a~~~l~~~~~~-~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~  225 (354)
                      +.+||+....+.. ++..++ -.|++|+|+|. ..+|.-...++...|+ .|+.+.+......                 
T Consensus        17 ~~~PcTp~aii~l-L~~~~i~l~Gk~vvVIGrS~iVGrPLa~lL~~~ga-tVt~~~~~t~~l~-----------------   77 (170)
T d1a4ia1          17 CFIPCTPKGCLEL-IKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNA-TVTTCHSKTAHLD-----------------   77 (170)
T ss_dssp             CCCCHHHHHHHHH-HHTTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECTTCSSHH-----------------
T ss_pred             CCCCChHHHHHHH-HHHhCcccccceEEEEecCCccchHHHHHHHhccC-ceEEEecccccHH-----------------
Confidence            4456555544443 344443 47899999996 6799999999999999 8888754332221                 


Q ss_pred             hhHHHHHHHHcCCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCC
Q 018529          226 RPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVP  273 (354)
Q Consensus       226 ~~~~~~i~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~  273 (354)
                          +.+     ...|+++-++|.+..+.  -+.++++ ..++.+|..
T Consensus        78 ----~~~-----~~aDivi~a~G~~~~i~--~~~vk~g-~iviDvgi~  113 (170)
T d1a4ia1          78 ----EEV-----NKGDILVVATGQPEMVK--GEWIKPG-AIVIDCGIN  113 (170)
T ss_dssp             ----HHH-----TTCSEEEECCCCTTCBC--GGGSCTT-CEEEECCCB
T ss_pred             ----HHH-----hhccchhhccccccccc--cccccCC-CeEeccCcc
Confidence                111     13688888888865543  2356675 667666653

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=89.68  E-value=0.099  Score=39.25  Aligned_cols=82  Identities=16%  Similarity=0.205  Sum_probs=51.2

Q ss_pred             eEEEEcCChhHHHHHHHHHHc-CCcEEEEE-cCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcccC
Q 018529          172 SVAVFGLGAVGLAAAEGARIA-GASRIIGV-DRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN  249 (354)
Q Consensus       172 ~vlI~G~g~~G~~a~~~a~~~-g~~~vi~v-~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~  249 (354)
                      +|.|+|+|.+|...+..++.. +. .++++ ++++++.      ....+..+.+.        ... ...+|+|+.|++.
T Consensus         5 rvgiiG~G~ig~~~~~~l~~~~~~-elvav~~~~~~~~------~~~~~~~~~~~--------~~~-~~~~D~Vvi~tp~   68 (170)
T d1f06a1           5 RVAIVGYGNLGRSVEKLIAKQPDM-DLVGIFSRRATLD------TKTPVFDVADV--------DKH-ADDVDVLFLCMGS   68 (170)
T ss_dssp             EEEEECCSHHHHHHHHHHTTCSSE-EEEEEEESSSCCS------SSSCEEEGGGG--------GGT-TTTCSEEEECSCT
T ss_pred             eEEEECChHHHHHHHHHHHhCCCc-EEEEEEecccccc------cccccccchhh--------hhh-ccccceEEEeCCC
Confidence            588999999998877777765 45 44444 4443321      11122222211        111 1258999999998


Q ss_pred             hHhHHHHHHHhhCCCceEEEE
Q 018529          250 IDNMISAFECVHDGWGVAVLV  270 (354)
Q Consensus       250 ~~~~~~~~~~l~~~~g~~v~~  270 (354)
                      ....+.+.++|..+ -.++..
T Consensus        69 ~~h~~~a~~aL~aG-~~vv~~   88 (170)
T d1f06a1          69 ATDIPEQAPKFAQF-ACTVDT   88 (170)
T ss_dssp             TTHHHHHHHHHTTT-SEEECC
T ss_pred             cccHHHHHHHHHCC-CcEEEe
Confidence            77888999999885 555543

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=89.64  E-value=0.95  Score=35.51  Aligned_cols=33  Identities=33%  Similarity=0.473  Sum_probs=27.7

Q ss_pred             CCCCeEEEEcCChhHHHHHHHH-HHcCCcEEEEEc
Q 018529          168 ERGSSVAVFGLGAVGLAAAEGA-RIAGASRIIGVD  201 (354)
Q Consensus       168 ~~~~~vlI~G~g~~G~~a~~~a-~~~g~~~vi~v~  201 (354)
                      -+|.+|+|-|.|.+|..+++++ +..|+ +|++++
T Consensus        29 l~g~~vaIqG~GnVG~~~a~~L~~e~Ga-~vv~vs   62 (234)
T d1b26a1          29 PKKATVAVQGFGNVGQFAALLISQELGS-KVVAVS   62 (234)
T ss_dssp             TTTCEEEEECCSHHHHHHHHHHHHHHCC-EEEEEE
T ss_pred             cCCCEEEEECCCHHHHHHHHHHHHhcCC-ceEEee
Confidence            4688999999999999988877 56899 777775

>d1ebda1 c.3.1.5 (A:7-154,A:272-346) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=89.64  E-value=0.15  Score=39.55  Aligned_cols=30  Identities=30%  Similarity=0.380  Sum_probs=26.8

Q ss_pred             EEEEcCChhHHHHHHHHHHcCCcEEEEEcCC
Q 018529          173 VAVFGLGAVGLAAAEGARIAGASRIIGVDRS  203 (354)
Q Consensus       173 vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~  203 (354)
                      |+|+|+|+.|+.++..|...|. +|+++++.
T Consensus         6 viVIG~GpaGl~aA~~aar~G~-kV~vIEk~   35 (223)
T d1ebda1           6 TLVVGAGPGGYVAAIRAAQLGQ-KVTIVEKG   35 (223)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTC-CEEEEESS
T ss_pred             EEEECCCHHHHHHHHHHHHCCC-EEEEEecC
Confidence            6788999999999999999999 88888754

>d1lvla1 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=89.62  E-value=0.15  Score=39.79  Aligned_cols=31  Identities=26%  Similarity=0.286  Sum_probs=27.8

Q ss_pred             eEEEEcCChhHHHHHHHHHHcCCcEEEEEcCC
Q 018529          172 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRS  203 (354)
Q Consensus       172 ~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~  203 (354)
                      .++|+|+|+.|+.++..|..+|. +|+.++..
T Consensus         7 DlvVIG~GpaGl~aA~~aa~~G~-~V~liE~~   37 (220)
T d1lvla1           7 TLLIIGGGPGGYVAAIRAGQLGI-PTVLVEGQ   37 (220)
T ss_dssp             SEEEECCSHHHHHHHHHHHHHTC-CEEEECSS
T ss_pred             CEEEECCCHHHHHHHHHHHHCCC-cEEEEecC
Confidence            47888999999999999999999 89999764

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=89.35  E-value=0.55  Score=33.10  Aligned_cols=62  Identities=21%  Similarity=0.160  Sum_probs=49.6

Q ss_pred             hhhhcCCCCCCeEEEE-cCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCC
Q 018529          161 TLNVAKPERGSSVAVF-GLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS  222 (354)
Q Consensus       161 l~~~~~~~~~~~vlI~-G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~  222 (354)
                      +++.++++.-+.+++. ..-..-.++.++++.+|..++++...+++..+.++++|++.++++.
T Consensus        57 ~l~~~~i~~a~~vv~~t~~d~~N~~~~~~~k~~~~~~iI~~~~~~~~~~~l~~~G~d~vi~p~  119 (132)
T d1lssa_          57 TLEDAGIEDADMYIAVTGKEEVNLMSSLLAKSYGINKTIARISEIEYKDVFERLGVDVVVSPE  119 (132)
T ss_dssp             HHHHTTTTTCSEEEECCSCHHHHHHHHHHHHHTTCCCEEEECSSTTHHHHHHHTTCSEEECHH
T ss_pred             hhhhcChhhhhhhcccCCcHHHHHHHHHHHHHcCCceEEEEecCHHHHHHHHHCCCCEEECHH
Confidence            3466777777766664 4456678888999999988899998999999999999999988653

>d1ojta1 c.3.1.5 (A:117-275,A:401-470) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=89.28  E-value=0.17  Score=39.70  Aligned_cols=31  Identities=35%  Similarity=0.396  Sum_probs=27.7

Q ss_pred             EEEEcCChhHHHHHHHHHHcCCcEEEEEcCCh
Q 018529          173 VAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  204 (354)
Q Consensus       173 vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~  204 (354)
                      |+|+|+|+.|+.|+..|...|. +|++++..+
T Consensus         9 viIIG~GPaGlsaA~~aa~~G~-~V~viE~~~   39 (229)
T d1ojta1           9 VVVLGGGPGGYSAAFAAADEGL-KVAIVERYK   39 (229)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTC-CEEEEESSS
T ss_pred             EEEECcCHHHHHHHHHHHHCCC-eEEEEeccC
Confidence            6788999999999999999999 899997654

>d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=89.09  E-value=0.17  Score=39.56  Aligned_cols=31  Identities=29%  Similarity=0.361  Sum_probs=26.8

Q ss_pred             EEEEcCChhHHHHHHHHHHcCCcEEEEEcCCh
Q 018529          173 VAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  204 (354)
Q Consensus       173 vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~  204 (354)
                      |+|+|+|+.|+.|+..|..+|. +|+.++..+
T Consensus         8 viVIG~GpAGl~aA~~aa~~G~-kV~lie~~~   38 (233)
T d1v59a1           8 VVIIGGGPAGYVAAIKAAQLGF-NTACVEKRG   38 (233)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTC-CEEEEESSS
T ss_pred             EEEECCCHHHHHHHHHHHHCCC-cEEEEEecC
Confidence            6788999999999999989999 888887643

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=89.03  E-value=0.15  Score=38.28  Aligned_cols=32  Identities=31%  Similarity=0.420  Sum_probs=26.6

Q ss_pred             CCCeEEEEcCChhHHHHHHHHHHcCCc-EEEEE
Q 018529          169 RGSSVAVFGLGAVGLAAAEGARIAGAS-RIIGV  200 (354)
Q Consensus       169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~-~vi~v  200 (354)
                      ++++|+|+|+|++|+-++..++.+|.+ .|+..
T Consensus         2 ~~~~VvIIGgG~~G~e~A~~l~~~g~~v~v~~~   34 (185)
T d1q1ra1           2 ANDNVVIVGTGLAGVEVAFGLRASGWEGNIRLV   34 (185)
T ss_dssp             CSCEEEEECCSHHHHHHHHHHHHTTCCSEEEEE
T ss_pred             CCCCEEEECCcHHHHHHHHHHHHcCCceEEEEe
Confidence            578999999999999999999999974 34433

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=88.99  E-value=0.18  Score=41.66  Aligned_cols=32  Identities=28%  Similarity=0.323  Sum_probs=28.5

Q ss_pred             eEEEEcCChhHHHHHHHHHHcCCcEEEEEcCCh
Q 018529          172 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  204 (354)
Q Consensus       172 ~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~  204 (354)
                      .|+|+|||..|++++..++..|. .|+++++++
T Consensus         9 dV~IIGAG~sGl~~a~~L~~~G~-~v~i~Ek~~   40 (298)
T d1w4xa1           9 DVLVVGAGFSGLYALYRLRELGR-SVHVIETAG   40 (298)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred             CEEEECccHHHHHHHHHHHhCCC-CEEEEEcCC
Confidence            58899999999999999999999 888898764

>d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=88.58  E-value=0.2  Score=38.21  Aligned_cols=32  Identities=19%  Similarity=0.131  Sum_probs=27.5

Q ss_pred             CeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCC
Q 018529          171 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS  203 (354)
Q Consensus       171 ~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~  203 (354)
                      ..|+|+|+|+.|+.|+..|...|. +++++++.
T Consensus         6 ~~VvIIGgGpaGl~aA~~~ar~g~-~v~vie~~   37 (192)
T d1vdca1           6 TRLCIVGSGPAAHTAAIYAARAEL-KPLLFEGW   37 (192)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHTTC-CCEEECCS
T ss_pred             ceEEEECCCHHHHHHHHHHHHcCC-cEEEEEee
Confidence            578999999999999999999999 78888643

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=88.55  E-value=0.25  Score=40.48  Aligned_cols=37  Identities=27%  Similarity=0.323  Sum_probs=31.0

Q ss_pred             CCCeEEEEcC-C--hhHHHHHHHHHHcCCcEEEEEcCChhh
Q 018529          169 RGSSVAVFGL-G--AVGLAAAEGARIAGASRIIGVDRSSKR  206 (354)
Q Consensus       169 ~~~~vlI~G~-g--~~G~~a~~~a~~~g~~~vi~v~~~~~~  206 (354)
                      +|+++||+|+ |  ++|.+.++.+...|+ +|+.+.++++.
T Consensus         7 ~gK~alVTGass~~GIG~aiA~~la~~Ga-~Vvi~~~~~~~   46 (297)
T d1d7oa_           7 RGKRAFIAGIADDNGYGWAVAKSLAAAGA-EILVGTWVPAL   46 (297)
T ss_dssp             TTCEEEEECCSSSSSHHHHHHHHHHHTTC-EEEEEEEHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCC-EEEEEeCchhh
Confidence            6889999997 4  799999999999999 88888776543

>d1ixka_ c.66.1.38 (A:) Hypothetical methyltransferase PH1374 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: NOL1/NOP2/sun
domain: Hypothetical methyltransferase PH1374
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=88.50  E-value=1.1  Score=36.78  Aligned_cols=101  Identities=22%  Similarity=0.293  Sum_probs=62.3

Q ss_pred             hcCCCCCCeEEEEcCChhHHHHHHHHHHcC-CcEEEEEcCChhhHHHH----HhcCCceEEcCCCCChhHHHHHHHHcCC
Q 018529          164 VAKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEA----KKFGVTDFVNTSEHDRPIQEVIAEMTNG  238 (354)
Q Consensus       164 ~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g-~~~vi~v~~~~~~~~~~----~~lg~~~v~~~~~~~~~~~~~i~~~~~~  238 (354)
                      ...+++|++||=.-|++=|. +.+++..++ -..+++.+.++.|...+    +++|...++....+...+     ....+
T Consensus       111 ~l~~~~g~~vlD~CAapGgK-t~~l~~~~~~~~~i~a~d~~~~r~~~l~~~~~r~~~~~i~~~~~d~~~~-----~~~~~  184 (313)
T d1ixka_         111 ALDPKPGEIVADMAAAPGGK-TSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHI-----GELNV  184 (313)
T ss_dssp             HHCCCTTCEEEECCSSCSHH-HHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGG-----GGGCC
T ss_pred             cccCCccceeeecccchhhh-hHhhhhhcccccceeeeccCHHHHHHHHHHHHHHHhhcccccccccccc-----ccccc
Confidence            45789999988774333233 334444443 22899999999998765    457876665444432111     11233


Q ss_pred             CccEEEE---cccCh-------------------------HhHHHHHHHhhCCCceEEEEc
Q 018529          239 GVDRSVE---CTGNI-------------------------DNMISAFECVHDGWGVAVLVG  271 (354)
Q Consensus       239 ~~dvv~d---~~g~~-------------------------~~~~~~~~~l~~~~g~~v~~g  271 (354)
                      .||.|+-   |+|..                         +.+..+++.++++ |++|..-
T Consensus       185 ~fD~ILvDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~lk~g-G~lVYsT  244 (313)
T d1ixka_         185 EFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPG-GILVYST  244 (313)
T ss_dssp             CEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             cccEEEEccccccCCceeeccchhhhhhhhHHHHHHHHHHHHHHhhhheeCCC-cEEEEee
Confidence            7898864   44431                         4667788889996 8877553

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=88.49  E-value=2.2  Score=31.05  Aligned_cols=37  Identities=27%  Similarity=0.504  Sum_probs=30.4

Q ss_pred             CeEEEEcCChhHHHHHHHHHHcCC-cEEEEEcCChhhH
Q 018529          171 SSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRF  207 (354)
Q Consensus       171 ~~vlI~G~g~~G~~a~~~a~~~g~-~~vi~v~~~~~~~  207 (354)
                      .+|.|+|+|.+|...+..+...|. ..++.++.++++.
T Consensus        20 ~KI~IIGaG~VG~~~A~~l~~~~l~~elvL~D~~~~~a   57 (159)
T d2ldxa1          20 CKITVVGVGDVGMACAISILLKGLADELALVDADTDKL   57 (159)
T ss_dssp             CEEEEECCSHHHHHHHHHHHTTTSCSEEEEECSCHHHH
T ss_pred             CeEEEECCCHHHHHHHHHHHhcCCCCEEEEEeCCchhh
Confidence            579999999999998888887764 4799999887653

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=88.38  E-value=0.44  Score=37.79  Aligned_cols=34  Identities=35%  Similarity=0.469  Sum_probs=30.4

Q ss_pred             CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcC
Q 018529          168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDR  202 (354)
Q Consensus       168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~  202 (354)
                      -.|.+|+|-|.|.+|..+++++...|+ +|++++.
T Consensus        29 l~g~~v~IqGfGnVG~~~a~~L~~~Ga-kvv~vsD   62 (242)
T d1v9la1          29 IEGKTVAIQGMGNVGRWTAYWLEKMGA-KVIAVSD   62 (242)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEEEC
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEeec
Confidence            478999999999999999999999999 8887753

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=88.29  E-value=0.22  Score=40.11  Aligned_cols=32  Identities=19%  Similarity=0.135  Sum_probs=27.5

Q ss_pred             eEEEEcCChhHHHHHHHHHHcCCcEEEEEcCCh
Q 018529          172 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  204 (354)
Q Consensus       172 ~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~  204 (354)
                      -|+|+|+|.+|+.++..+...|. +|+++++.+
T Consensus         6 DvvIIGaGi~Gls~A~~La~~G~-~V~vlE~~~   37 (276)
T d1ryia1           6 EAVVIGGGIIGSAIAYYLAKENK-NTALFESGT   37 (276)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred             CEEEECcCHHHHHHHHHHHHCCC-cEEEEeCCC
Confidence            38899999999998888888898 999998754

>d3lada1 c.3.1.5 (A:1-158,A:278-348) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=88.26  E-value=0.21  Score=38.77  Aligned_cols=30  Identities=27%  Similarity=0.335  Sum_probs=26.6

Q ss_pred             EEEEcCChhHHHHHHHHHHcCCcEEEEEcCC
Q 018529          173 VAVFGLGAVGLAAAEGARIAGASRIIGVDRS  203 (354)
Q Consensus       173 vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~  203 (354)
                      |+|+|+|+.|+.|+..|...|. +|.+++..
T Consensus         6 viIIGgGpAGl~aA~~aar~G~-~V~viE~~   35 (229)
T d3lada1           6 VIVIGAGPGGYVAAIKSAQLGL-KTALIEKY   35 (229)
T ss_dssp             EEEECCSHHHHHHHHHHHHHTC-CEEEEECC
T ss_pred             EEEECcCHHHHHHHHHHHHCCC-eEEEEecc
Confidence            6788999999999999999999 88888754

>d3grsa1 c.3.1.5 (A:18-165,A:291-363) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.18  E-value=0.22  Score=38.59  Aligned_cols=30  Identities=40%  Similarity=0.412  Sum_probs=26.7

Q ss_pred             EEEEcCChhHHHHHHHHHHcCCcEEEEEcCC
Q 018529          173 VAVFGLGAVGLAAAEGARIAGASRIIGVDRS  203 (354)
Q Consensus       173 vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~  203 (354)
                      ++|+|+|+.|+.++..|..+|. +|++++..
T Consensus         6 viIIG~GpaG~~aA~~aar~G~-kV~vIEk~   35 (221)
T d3grsa1           6 YLVIGGGSGGLASARRAAELGA-RAAVVESH   35 (221)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTC-CEEEEESS
T ss_pred             EEEECCCHHHHHHHHHHHHCCC-EEEEEecc
Confidence            6788999999999999999999 88888754

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=88.12  E-value=0.56  Score=37.93  Aligned_cols=72  Identities=17%  Similarity=0.249  Sum_probs=42.7

Q ss_pred             EEEEcC-ChhHHHHHHHHHHcCCcEEEEEcC--ChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC-CccEEEEccc
Q 018529          173 VAVFGL-GAVGLAAAEGARIAGASRIIGVDR--SSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTG  248 (354)
Q Consensus       173 vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~--~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~~dvv~d~~g  248 (354)
                      |||+|+ |-+|...+..+...|...|+++++  +..+...+.++......+..+    +.+.+.....- .+++++.+++
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~i~~~aa   77 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKED----FLIQIMAGEEFGDVEAIFHEGA   77 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHHTSCCSEEEEHHH----HHHHHHTTCCCSSCCEEEECCS
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchhhcccccchhhhccchH----HHHHHhhhhcccchhhhhhhcc
Confidence            799987 999999888888889757888752  333333444444433332211    33333322222 5778877654

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=88.11  E-value=0.51  Score=34.31  Aligned_cols=39  Identities=13%  Similarity=0.089  Sum_probs=32.6

Q ss_pred             CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhH
Q 018529          169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRF  207 (354)
Q Consensus       169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~  207 (354)
                      |..+|.|+|+|.+|.....++...+...++.++.++++.
T Consensus         2 p~~KI~IIGaG~VG~~~a~~l~~~~l~el~L~Di~~~~~   40 (150)
T d1t2da1           2 PKAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKNMP   40 (150)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHH
T ss_pred             CCCeEEEECCCHHHHHHHHHHHhCCCCeEEEEeccCCcc
Confidence            456899999999999888888888887899999877653

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=88.05  E-value=0.19  Score=41.43  Aligned_cols=32  Identities=13%  Similarity=0.345  Sum_probs=27.9

Q ss_pred             eEEEEcCChhHHHHHHHHHHcCCcEEEEEcCCh
Q 018529          172 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  204 (354)
Q Consensus       172 ~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~  204 (354)
                      .|+|+|||..|+.++..+...|. +|.+++.++
T Consensus         3 dv~IIGaG~sGl~~A~~L~~~g~-~V~iiEk~~   34 (298)
T d1i8ta1           3 DYIIVGSGLFGAVCANELKKLNK-KVLVIEKRN   34 (298)
T ss_dssp             EEEEECCSHHHHHHHHHHGGGTC-CEEEECSSS
T ss_pred             cEEEECCcHHHHHHHHHHHhCCC-cEEEEECCC
Confidence            47899999999999999988898 899997654

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=87.97  E-value=0.42  Score=36.39  Aligned_cols=39  Identities=23%  Similarity=0.243  Sum_probs=32.3

Q ss_pred             eEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh
Q 018529          172 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK  212 (354)
Q Consensus       172 ~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~  212 (354)
                      +|.|+|.|-+|+..+.++ +.|. .|+++|.++++.+.+++
T Consensus         2 kI~ViGlG~vGl~~a~~~-a~g~-~V~g~Din~~~v~~l~~   40 (196)
T d1dlja2           2 KIAVAGSGYVGLSLGVLL-SLQN-EVTIVDILPSKVDKINN   40 (196)
T ss_dssp             EEEEECCSHHHHHHHHHH-TTTS-EEEEECSCHHHHHHHHT
T ss_pred             EEEEECCChhHHHHHHHH-HCCC-cEEEEECCHHHHHHHhh
Confidence            478889999999866544 5788 99999999999888764

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=87.92  E-value=1.1  Score=33.83  Aligned_cols=107  Identities=20%  Similarity=0.225  Sum_probs=61.6

Q ss_pred             hhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCc-eEEcCCCCChhHHHHHHHHcC
Q 018529          163 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT-DFVNTSEHDRPIQEVIAEMTN  237 (354)
Q Consensus       163 ~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~-~v~~~~~~~~~~~~~i~~~~~  237 (354)
                      ....+++++.++=.++|.=|+ +..+++...-.+|+++|++++..+.+++    ++.. ..+...-.  ++...+..+..
T Consensus        17 ~~l~~~~~~~~lD~t~G~Ggh-s~~il~~~~~~~vi~~D~d~~~l~~a~~~l~~~~~r~~~~~~~f~--~~~~~~~~~~~   93 (192)
T d1m6ya2          17 EFLKPEDEKIILDCTVGEGGH-SRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYR--EADFLLKTLGI   93 (192)
T ss_dssp             HHHCCCTTCEEEETTCTTSHH-HHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGG--GHHHHHHHTTC
T ss_pred             HhhCCCCCCEEEEecCCCcHH-HHHHHhcCCCCeEEEeechHHHHHHHHHhhccccccccchhHHHh--hHHHHHHHcCC
Confidence            445678888664433354344 4455554432399999999999988865    3422 22222211  25555555544


Q ss_pred             CCccEEEEcccC-h--------------HhHHHHHHHhhCCCceEEEEcCC
Q 018529          238 GGVDRSVECTGN-I--------------DNMISAFECVHDGWGVAVLVGVP  273 (354)
Q Consensus       238 ~~~dvv~d~~g~-~--------------~~~~~~~~~l~~~~g~~v~~g~~  273 (354)
                      +.+|.|+--.|- .              ..+..+.+.|+++ |+++.+...
T Consensus        94 ~~vdgIl~DlGvSs~Qld~~~r~~~~~~~~L~~a~~~Lk~g-G~l~ii~f~  143 (192)
T d1m6ya2          94 EKVDGILMDLGVSTYQLKGENRELENLKEFLKKAEDLLNPG-GRIVVISFH  143 (192)
T ss_dssp             SCEEEEEEECSCCHHHHHTSHTHHHHHHHHHHHGGGGEEEE-EEEEEEESS
T ss_pred             CCcceeeeccchhHhhhhhhhccchhHHHHHHHHHHhcCCC-Ceeeeeccc
Confidence            588877532332 1              3455666677886 887766543

>d1yzha1 c.66.1.53 (A:8-211) tRNA (guanine-N(7)-)-methyltransferase TrmB {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TrmB-like
domain: tRNA (guanine-N(7)-)-methyltransferase TrmB
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=87.91  E-value=0.83  Score=35.03  Aligned_cols=93  Identities=16%  Similarity=0.163  Sum_probs=61.7

Q ss_pred             CeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH----HhcCCceE--EcCCCCChhHHHHHHHHcCCCccEEE
Q 018529          171 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTDF--VNTSEHDRPIQEVIAEMTNGGVDRSV  244 (354)
Q Consensus       171 ~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~----~~lg~~~v--~~~~~~~~~~~~~i~~~~~~~~dvv~  244 (354)
                      ..||=+|+|. |..++.+|+...-..+++++.++.....+    ++.+...+  +..+..+  +.   ..+..+.+|.|+
T Consensus        33 plvLdIGcG~-G~~~~~lA~~~p~~~~iGid~~~~~v~~a~~~~~~~~l~Ni~~~~~da~~--l~---~~~~~~~~~~i~  106 (204)
T d1yzha1          33 PIHVEVGSGK-GAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSD--LT---DYFEDGEIDRLY  106 (204)
T ss_dssp             CEEEEESCTT-SHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSC--GG---GTSCTTCCSEEE
T ss_pred             CeEEEEeccC-CHHHHHHHHHCCCCceEEEeccHHHHHHHHHhhhhhccccceeeecCHHH--Hh---hhccCCceehhc
Confidence            3455568874 88899999987544999999998766654    44566543  2222211  21   122234788887


Q ss_pred             EcccC--------------hHhHHHHHHHhhCCCceEEEE
Q 018529          245 ECTGN--------------IDNMISAFECVHDGWGVAVLV  270 (354)
Q Consensus       245 d~~g~--------------~~~~~~~~~~l~~~~g~~v~~  270 (354)
                      .....              ++.++.+.+.|+++ |.+.+.
T Consensus       107 i~fPdPw~K~~h~krRl~~~~~l~~~~~~Lkpg-G~l~i~  145 (204)
T d1yzha1         107 LNFSDPWPKKRHEKRRLTYKTFLDTFKRILPEN-GEIHFK  145 (204)
T ss_dssp             EESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTT-CEEEEE
T ss_pred             ccccccccchhhhhhhhhHHHHHHHHHHhCCCC-cEEEEE
Confidence            66553              36788999999997 998765

>d1tdja1 c.79.1.1 (A:5-335) Threonine deaminase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Threonine deaminase
species: Escherichia coli [TaxId: 562]

Probab=87.83  E-value=1.5  Score=36.19  Aligned_cols=102  Identities=12%  Similarity=0.123  Sum_probs=62.9

Q ss_pred             CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEc--CChhhHHHHHhcCCceEEcCCCCCh-------------------
Q 018529          168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVD--RSSKRFEEAKKFGVTDFVNTSEHDR-------------------  226 (354)
Q Consensus       168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~--~~~~~~~~~~~lg~~~v~~~~~~~~-------------------  226 (354)
                      .+...|+...+|..|.+.+..++.+|.+.++.+.  .+.+|.+.++.+|++.+....+.+.                   
T Consensus        73 ~~~~~vv~assGN~g~a~A~~a~~~g~~~~i~~p~~~~~~k~~~l~~~Ga~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (331)
T d1tdja1          73 QKAHGVITASAGNHAQGVAFSSARLGVKALIVMPTATADIKVDAVRGFGGEVLLHGANFDEAKAKAIELSQQQGFTWVPP  152 (331)
T ss_dssp             SCSSSCEEEECSSSHHHHHHHHHHTTCCEEEECCSSCCHHHHHHHHHHSCEEECCCSSHHHHHHHHHHHHHHHCCEECCS
T ss_pred             CCCCeeeecccchhHHHHHHhhccccccceeeccccchhHHHHHHHhcCCEEEEcCcccccchhhhhhhhhcCCCccccc
Confidence            3445566666799999999999999995554443  2557888889999975542221110                   


Q ss_pred             -----------hHHHHHHHHcCCCccEEEEcccChHhHH---HHHHHhhCCCceEEEEc
Q 018529          227 -----------PIQEVIAEMTNGGVDRSVECTGNIDNMI---SAFECVHDGWGVAVLVG  271 (354)
Q Consensus       227 -----------~~~~~i~~~~~~~~dvv~d~~g~~~~~~---~~~~~l~~~~g~~v~~g  271 (354)
                                 ....++.+.. +.+|.||-++|+-.++.   ..++.+.+. .+++.+.
T Consensus       153 ~~~~~~~~g~~t~~~Ei~~q~-~~~D~vv~~~G~GG~~aG~~~~~~~~~~~-~~ii~ve  209 (331)
T d1tdja1         153 FDHPMVIAGQGTLALELLQQD-AHLDRVFVPVGGGGLAAGVAVLIKQLMPQ-IKVIAVE  209 (331)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHC-TTCCEEEEECSSSHHHHHHHHHHHHHCTT-CEEEEEE
T ss_pred             cCChHHhhhhhhHHHHHHHhc-CCCCEEEEeCChhHHHHHHHHHHHHhCCC-cEEEEec
Confidence                       1122222221 36899999988755544   344445555 6776664

>d2nvwa1 c.2.1.3 (A:2-154,A:374-457) Galactose/lactose metabolism regulatory protein GAL80 {Yeast (Kluyveromyces lactis) [TaxId: 28985]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Galactose/lactose metabolism regulatory protein GAL80
species: Yeast (Kluyveromyces lactis) [TaxId: 28985]

Probab=87.81  E-value=0.96  Score=35.50  Aligned_cols=95  Identities=9%  Similarity=0.012  Sum_probs=58.9

Q ss_pred             eEEEEcCCh----hHHHHHHHHHHc--CCcEEEE-EcCChhhHH-HHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEE
Q 018529          172 SVAVFGLGA----VGLAAAEGARIA--GASRIIG-VDRSSKRFE-EAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRS  243 (354)
Q Consensus       172 ~vlI~G~g~----~G~~a~~~a~~~--g~~~vi~-v~~~~~~~~-~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv  243 (354)
                      +|.|+|+|.    ++...+...+..  +. .+++ .+++.++.+ ++++++......+.+    +.+.+.   ...+|+|
T Consensus        18 rvgiIG~G~~~~~~~~~h~~ai~~~~~~~-~ivav~d~~~~~~~~~~~~~~~~~~~~~~~----~~~l~~---~~~iD~V   89 (237)
T d2nvwa1          18 RVGFVGLTSGKSWVAKTHFLAIQQLSSQF-QIVALYNPTLKSSLQTIEQLQLKHATGFDS----LESFAQ---YKDIDMI   89 (237)
T ss_dssp             EEEEECCCSTTSHHHHTHHHHHHHTTTTE-EEEEEECSCHHHHHHHHHHTTCTTCEEESC----HHHHHH---CTTCSEE
T ss_pred             EEEEEecCccccHHHHHHHHHHHhcCCCe-EEEEEEcCCHHHHHHHHHhcccccceeecc----hhhccc---cccccee
Confidence            678999865    444445555544  45 5664 566666654 567777654333333    433332   2379999


Q ss_pred             EEcccChHhHHHHHHHhhCCC----ceEEEEcCCC
Q 018529          244 VECTGNIDNMISAFECVHDGW----GVAVLVGVPS  274 (354)
Q Consensus       244 ~d~~g~~~~~~~~~~~l~~~~----g~~v~~g~~~  274 (354)
                      +.++....+.+.+..+|..+.    ++-+++.-+.
T Consensus        90 ~i~tp~~~h~~~~~~al~aG~~~~~~k~V~~EKPl  124 (237)
T d2nvwa1          90 VVSVKVPEHYEVVKNILEHSSQNLNLRYLYVEWAL  124 (237)
T ss_dssp             EECSCHHHHHHHHHHHHHHSSSCSSCCEEEEESSS
T ss_pred             eccCCCcchhhHHHHHHHhcccccCCceEEEeccc
Confidence            999988778888888887520    3567787654

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=87.80  E-value=0.44  Score=32.91  Aligned_cols=37  Identities=16%  Similarity=0.056  Sum_probs=28.7

Q ss_pred             CCCCeEEEEcCChhHHHHHHHHHHcCCc--EEEEEcCCh
Q 018529          168 ERGSSVAVFGLGAVGLAAAEGARIAGAS--RIIGVDRSS  204 (354)
Q Consensus       168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~--~vi~v~~~~  204 (354)
                      +.+++++|+|+|.+|.-++..+..++.+  .|..+.+.+
T Consensus        18 ~~p~~v~ivGgG~ig~E~A~~l~~l~~~~~~Vtli~~~~   56 (117)
T d1aoga2          18 EPPRRVLTVGGGFISVEFAGIFNAYKPKDGQVTLCYRGE   56 (117)
T ss_dssp             SCCSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSS
T ss_pred             hcCCeEEEECCcHHHHHHHHHhhhcccCCcEEEEEeccc
Confidence            3457999999999999988887877642  688886543

>d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Phenol hydroxylase
species: Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]

Probab=87.56  E-value=0.2  Score=41.90  Aligned_cols=32  Identities=28%  Similarity=0.389  Sum_probs=25.1

Q ss_pred             eEEEEcCChhHHHHHHHHH-----HcCCcEEEEEcCCh
Q 018529          172 SVAVFGLGAVGLAAAEGAR-----IAGASRIIGVDRSS  204 (354)
Q Consensus       172 ~vlI~G~g~~G~~a~~~a~-----~~g~~~vi~v~~~~  204 (354)
                      -|+|+|+|+.|++++.++.     ..|. +|+++++.+
T Consensus         9 DV~IvGaG~aGl~lA~~La~~~~~~~G~-~v~vlEr~~   45 (360)
T d1pn0a1           9 DVLIVGAGPAGLMAARVLSEYVRQKPDL-KVRIIDKRS   45 (360)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHHHHSTTC-CEEEECSSS
T ss_pred             CEEEECcCHHHHHHHHHHHhcccccCCC-cEEEEcCCC
Confidence            3889999999998776663     4688 888888654

>d1wkva1 c.79.1.1 (A:2-383) O-acetylserine sulfhydrylase (Cysteine synthase) {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=87.48  E-value=4.8  Score=33.81  Aligned_cols=55  Identities=22%  Similarity=0.171  Sum_probs=40.8

Q ss_pred             CCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEc--CChhhHHHHHhcCCceEEc
Q 018529          166 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVD--RSSKRFEEAKKFGVTDFVN  220 (354)
Q Consensus       166 ~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~--~~~~~~~~~~~lg~~~v~~  220 (354)
                      +++++.+|+-..+|..|.+.+.+|+.+|.+-++.+.  .+++|.+.++.+|++.+..
T Consensus       140 ~~~~g~~VVeaSSGN~GiAlA~~aa~lGik~~Iv~P~~~~~~K~~~ira~GAeVi~~  196 (382)
T d1wkva1         140 RVEKGSLVADATSSNFGVALSAVARLYGYRARVYLPGAAEEFGKLLPRLLGAQVIVD  196 (382)
T ss_dssp             TSCTTCEEEEECCHHHHHHHHHHHHHTTCEEEEEEETTSCHHHHHHHHHTTCEEEEE
T ss_pred             ccCCCCEEEEeCCcHHHHHHHHHHHHcCCCEEEEeeccccccccccccccCcceeec
Confidence            567777654446699999999999999995444443  2557888899999976654

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=87.38  E-value=0.28  Score=40.18  Aligned_cols=32  Identities=25%  Similarity=0.398  Sum_probs=26.2

Q ss_pred             eEEEEcCChhHHHHHHHHHHcCCcEEEEEcCC
Q 018529          172 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRS  203 (354)
Q Consensus       172 ~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~  203 (354)
                      .|+|+|+|.+|++++..+...|.++|++++++
T Consensus         3 dViIIGaGi~G~s~A~~La~~G~~~V~liE~~   34 (305)
T d1pj5a2           3 RIVIIGAGIVGTNLADELVTRGWNNITVLDQG   34 (305)
T ss_dssp             CEEEECCSHHHHHHHHHHHHTTCCCEEEECSS
T ss_pred             CEEEECcCHHHHHHHHHHHHcCCCcEEEEeCC
Confidence            58999999999987777667786579999765

>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=87.26  E-value=0.27  Score=40.41  Aligned_cols=32  Identities=34%  Similarity=0.567  Sum_probs=27.7

Q ss_pred             eEEEEcCChhHHHHHHHHHHcCCcEEEEEcCCh
Q 018529          172 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  204 (354)
Q Consensus       172 ~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~  204 (354)
                      -|+|+|+|..|+.++..|...|+ +|++++...
T Consensus        18 DVlVIG~G~aGl~aA~~la~~G~-~V~lvEK~~   49 (308)
T d1y0pa2          18 DVVVVGSGGAGFSAAISATDSGA-KVILIEKEP   49 (308)
T ss_dssp             SEEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred             CEEEECcCHHHHHHHHHHHHCCC-cEEEEecCC
Confidence            47899999999999999999999 899997643

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.23  E-value=0.22  Score=41.42  Aligned_cols=31  Identities=29%  Similarity=0.398  Sum_probs=27.4

Q ss_pred             EEEEcCChhHHHHHHHHHHcCCcEEEEEcCCh
Q 018529          173 VAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  204 (354)
Q Consensus       173 vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~  204 (354)
                      |+|+|+|..|+.++..+...|. +|++++.++
T Consensus         2 ViVIGaG~aGL~aA~~L~~~G~-~V~VlE~~~   32 (383)
T d2v5za1           2 VVVVGGGISGMAAAKLLHDSGL-NVVVLEARD   32 (383)
T ss_dssp             EEEECCBHHHHHHHHHHHHTTC-CEEEEESSS
T ss_pred             EEEECCCHHHHHHHHHHHhCCC-CEEEEecCC
Confidence            7889999999999999999999 899997644

>d1vlma_ c.66.1.41 (A:) Possible histamine N-methyltransferase TM1293 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Possible histamine N-methyltransferase TM1293
species: Thermotoga maritima [TaxId: 2336]

Probab=87.10  E-value=0.72  Score=35.18  Aligned_cols=89  Identities=20%  Similarity=0.224  Sum_probs=58.2

Q ss_pred             CCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEc
Q 018529          167 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  246 (354)
Q Consensus       167 ~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~  246 (354)
                      +.++.+||=+|||. |..+..+     . ++++++.+++..+.+++-+...+. ....+  +     ...++.||+|+..
T Consensus        34 ~~~~~~vLDiGcG~-G~~~~~~-----~-~~~giD~s~~~~~~a~~~~~~~~~-~d~~~--l-----~~~~~~fD~I~~~   98 (208)
T d1vlma_          34 LLPEGRGVEIGVGT-GRFAVPL-----K-IKIGVEPSERMAEIARKRGVFVLK-GTAEN--L-----PLKDESFDFALMV   98 (208)
T ss_dssp             HCCSSCEEEETCTT-STTHHHH-----T-CCEEEESCHHHHHHHHHTTCEEEE-CBTTB--C-----CSCTTCEEEEEEE
T ss_pred             hCCCCeEEEECCCC-ccccccc-----c-eEEEEeCChhhccccccccccccc-ccccc--c-----ccccccccccccc
Confidence            45677899999863 5444433     2 568999999999999887764332 21111  1     0112379999874


Q ss_pred             cc-----Ch-HhHHHHHHHhhCCCceEEEEc
Q 018529          247 TG-----NI-DNMISAFECVHDGWGVAVLVG  271 (354)
Q Consensus       247 ~g-----~~-~~~~~~~~~l~~~~g~~v~~g  271 (354)
                      ..     .+ ..+..+.+.|+++ |++++..
T Consensus        99 ~~l~h~~d~~~~l~~~~~~L~pg-G~l~i~~  128 (208)
T d1vlma_          99 TTICFVDDPERALKEAYRILKKG-GYLIVGI  128 (208)
T ss_dssp             SCGGGSSCHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             cccccccccccchhhhhhcCCCC-ceEEEEe
Confidence            22     22 4678889999997 9887664

>d2fhpa1 c.66.1.46 (A:1-182) Putative methylase EF2452 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methylase EF2452
species: Enterococcus faecalis [TaxId: 1351]

Probab=87.04  E-value=0.44  Score=35.95  Aligned_cols=95  Identities=13%  Similarity=0.177  Sum_probs=55.3

Q ss_pred             CCCCCeEEEE--cCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCceEEcCCCCChhHHHHHHHHc-CC-
Q 018529          167 PERGSSVAVF--GLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMT-NG-  238 (354)
Q Consensus       167 ~~~~~~vlI~--G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~~~-~~-  238 (354)
                      ...|.+||=.  |.|++|+.|+    ..|+..|+.++.+.+..+.+++    ++...-+.....+  ..+.++.+. .+ 
T Consensus        39 ~~~~~~vLDlfaGsG~~g~ea~----srGa~~v~~ve~~~~a~~~~~~N~~~~~~~~~~~i~~~D--~~~~l~~~~~~~~  112 (182)
T d2fhpa1          39 YFDGGMALDLYSGSGGLAIEAV----SRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMD--ANRALEQFYEEKL  112 (182)
T ss_dssp             CCSSCEEEETTCTTCHHHHHHH----HTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESC--HHHHHHHHHHTTC
T ss_pred             hcCCCEEEEcccccccccceee----ecchhHHHHHHHHHHHHHHHHHHhhhhhccccccccccc--chhhhhhhcccCC
Confidence            4467787776  4477777533    4788899999999998888754    4543111111222  555555543 23 


Q ss_pred             CccEEEEccc--C---hHhHHHHHH--HhhCCCceEE
Q 018529          239 GVDRSVECTG--N---IDNMISAFE--CVHDGWGVAV  268 (354)
Q Consensus       239 ~~dvv~d~~g--~---~~~~~~~~~--~l~~~~g~~v  268 (354)
                      .||+||---+  .   ...++.+.+  .|+++ |.++
T Consensus       113 ~fDlIflDPPY~~~~~~~~l~~i~~~~~L~~~-giIi  148 (182)
T d2fhpa1         113 QFDLVLLDPPYAKQEIVSQLEKMLERQLLTNE-AVIV  148 (182)
T ss_dssp             CEEEEEECCCGGGCCHHHHHHHHHHTTCEEEE-EEEE
T ss_pred             CcceEEechhhhhhHHHHHHHHHHHCCCCCCC-EEEE
Confidence            7999985432  1   123444433  36665 6554

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=86.93  E-value=0.51  Score=32.52  Aligned_cols=35  Identities=14%  Similarity=0.058  Sum_probs=27.0

Q ss_pred             CCCeEEEEcCChhHHHHHHHHHHc---CCcEEEEEcCCh
Q 018529          169 RGSSVAVFGLGAVGLAAAEGARIA---GASRIIGVDRSS  204 (354)
Q Consensus       169 ~~~~vlI~G~g~~G~~a~~~a~~~---g~~~vi~v~~~~  204 (354)
                      ..++++|+|+|.+|.-.++++..+   |. .|..+.+++
T Consensus        17 ~p~~v~IiGgG~ig~E~A~~l~~~~~~g~-~Vtli~~~~   54 (117)
T d1feca2          17 APKRALCVGGGYISIEFAGIFNAYKARGG-QVDLAYRGD   54 (117)
T ss_dssp             CCSEEEEECSSHHHHHHHHHHHHHSCTTC-EEEEEESSS
T ss_pred             cCCeEEEECCChHHHHHHHHhHhhccccc-ccceecccc
Confidence            357999999999999888776654   66 788886653

>d1h6va1 c.3.1.5 (A:10-170,A:293-366) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=86.89  E-value=0.26  Score=38.64  Aligned_cols=29  Identities=31%  Similarity=0.407  Sum_probs=26.4

Q ss_pred             EEEEcCChhHHHHHHHHHHcCCcEEEEEcC
Q 018529          173 VAVFGLGAVGLAAAEGARIAGASRIIGVDR  202 (354)
Q Consensus       173 vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~  202 (354)
                      |+|+|+|+.|+.|+..|..+|. +|..++.
T Consensus         6 viVIG~GpaGl~aA~~aa~~G~-kV~viE~   34 (235)
T d1h6va1           6 LIIIGGGSGGLAAAKEAAKFDK-KVMVLDF   34 (235)
T ss_dssp             EEEECCSHHHHHHHHHHGGGCC-CEEEECC
T ss_pred             EEEECCCHHHHHHHHHHHHCCC-eEEEEec
Confidence            7888999999999999999999 8888974

>d1rm4a1 c.2.1.3 (A:1-148,A:313-333) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Spinach (Spinacia oleracea) [TaxId: 3562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Spinach (Spinacia oleracea) [TaxId: 3562]

Probab=86.82  E-value=1.1  Score=33.13  Aligned_cols=96  Identities=24%  Similarity=0.336  Sum_probs=55.9

Q ss_pred             eEEEEcCChhHHHHHHHHHHcCCc--EEEEEcC--ChhhHHHHHhc----CCc--eE---------EcC------CCCCh
Q 018529          172 SVAVFGLGAVGLAAAEGARIAGAS--RIIGVDR--SSKRFEEAKKF----GVT--DF---------VNT------SEHDR  226 (354)
Q Consensus       172 ~vlI~G~g~~G~~a~~~a~~~g~~--~vi~v~~--~~~~~~~~~~l----g~~--~v---------~~~------~~~~~  226 (354)
                      +|.|.|-|-+|.+....+....-.  .|+++..  +.+...++-++    |..  .+         ++-      ...+ 
T Consensus         2 kIgINGfGRIGR~v~R~~~~~~~~~i~ivaINd~~~~~~~ayLlkyDSvhG~~~~~i~~~~~~~~~ing~~I~~~~~~~-   80 (172)
T d1rm4a1           2 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTGGVKQASHLLKYDSILGTFDADVKTAGDSAISVDGKVIKVVSDRN-   80 (172)
T ss_dssp             EEEEECCSHHHHHHHHHHHHCSSCSEEEEEEECTTCHHHHHHHHHCCTTTCSCSSCEEECTTSEEEETTEEEEEECCSC-
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCCCEEEEEEcCCCCHHHHHHHHhcCcccccccceeEecCCcceEECCEEEEEecCCC-
Confidence            578889999999999877654321  5666632  23444444332    110  01         110      1111 


Q ss_pred             hHHHHHHHHcCC--CccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCC
Q 018529          227 PIQEVIAEMTNG--GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS  274 (354)
Q Consensus       227 ~~~~~i~~~~~~--~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~  274 (354)
                           ..++..+  ++|+|+||+|.....+.+...|..+ .+-|++..+.
T Consensus        81 -----p~~i~W~~~gvDiViEcTG~f~~~~~~~~hl~~G-akkViiSAP~  124 (172)
T d1rm4a1          81 -----PVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAG-AKKVLITAPG  124 (172)
T ss_dssp             -----GGGSCHHHHTCCEEEECSSSCCBHHHHHHHHHTT-CSCEEESSCC
T ss_pred             -----hHHCChhhcCCCEEEecCceEccHHHHHHHHhcC-CceEEeeccc
Confidence                 1111111  7999999999877778888888886 6556666554

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=86.57  E-value=0.35  Score=40.30  Aligned_cols=34  Identities=24%  Similarity=0.404  Sum_probs=26.7

Q ss_pred             CeEEEEcCChhHHHHHHHHHHcCC-cEEEEEcCCh
Q 018529          171 SSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSS  204 (354)
Q Consensus       171 ~~vlI~G~g~~G~~a~~~a~~~g~-~~vi~v~~~~  204 (354)
                      ++|+|+|||+.|++++..++..|. ..|++.++++
T Consensus         5 KrVaIIGaG~sGl~~A~~L~~~~~~~~v~vfEk~~   39 (335)
T d2gv8a1           5 RKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRG   39 (335)
T ss_dssp             CEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSS
T ss_pred             CeEEEECcCHHHHHHHHHHHHhCCCCCEEEEECCC
Confidence            689999999999988866655443 2899998775

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=86.43  E-value=0.68  Score=35.45  Aligned_cols=68  Identities=16%  Similarity=0.271  Sum_probs=41.8

Q ss_pred             CeEEEEcC-ChhHHHHHHHHHHcCCc-EEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEccc
Q 018529          171 SSVAVFGL-GAVGLAAAEGARIAGAS-RIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  248 (354)
Q Consensus       171 ~~vlI~G~-g~~G~~a~~~a~~~g~~-~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g  248 (354)
                      ++|||+|+ |.+|...+..+...|.. +|++..+++..       ....+. ....+  +.+.... ..+..|.|+.++|
T Consensus         3 KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~-------~~~~~~-~~~~d--~~~~~~~-~~~~~d~vi~~~g   71 (212)
T d2a35a1           3 KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA-------EHPRLD-NPVGP--LAELLPQ-LDGSIDTAFCCLG   71 (212)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC-------CCTTEE-CCBSC--HHHHGGG-CCSCCSEEEECCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchh-------hccccc-ccccc--hhhhhhc-cccchheeeeeee
Confidence            78999998 99999999988888852 56666554311       011111 11111  4333322 2337899999987


Q ss_pred             C
Q 018529          249 N  249 (354)
Q Consensus       249 ~  249 (354)
                      .
T Consensus        72 ~   72 (212)
T d2a35a1          72 T   72 (212)
T ss_dssp             C
T ss_pred             e
Confidence            5

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=86.43  E-value=1.3  Score=32.74  Aligned_cols=73  Identities=14%  Similarity=0.090  Sum_probs=42.6

Q ss_pred             CCCeEEEEcCChhHHH--HHHHHHHc-C--CcEEEEEcCChhhHHHH--------HhcCCc-eEEcCCCCChhHHHHHHH
Q 018529          169 RGSSVAVFGLGAVGLA--AAEGARIA-G--ASRIIGVDRSSKRFEEA--------KKFGVT-DFVNTSEHDRPIQEVIAE  234 (354)
Q Consensus       169 ~~~~vlI~G~g~~G~~--a~~~a~~~-g--~~~vi~v~~~~~~~~~~--------~~lg~~-~v~~~~~~~~~~~~~i~~  234 (354)
                      +.-+|.|+|+|.+|..  ...+++.. .  ...++.+|.++++.+..        ..++.. .+....+    ..+.+  
T Consensus         2 k~~KI~iIGaGsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~~d----~~eal--   75 (167)
T d1u8xx1           2 KSFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAATTD----PEEAF--   75 (167)
T ss_dssp             CCEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEESC----HHHHH--
T ss_pred             CCceEEEECCChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEecCC----hhhcc--
Confidence            3446888998776543  33333322 2  23899999999887632        223443 2332222    33332  


Q ss_pred             HcCCCccEEEEcccCh
Q 018529          235 MTNGGVDRSVECTGNI  250 (354)
Q Consensus       235 ~~~~~~dvv~d~~g~~  250 (354)
                         .+.|+|+.++|.+
T Consensus        76 ---~~AD~Vvitag~~   88 (167)
T d1u8xx1          76 ---TDVDFVMAHIRVG   88 (167)
T ss_dssp             ---SSCSEEEECCCTT
T ss_pred             ---CCCCEEEECCCcC
Confidence               3689999999864

>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Putative methyltransferase Atu0340
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=86.20  E-value=4  Score=33.21  Aligned_cols=100  Identities=20%  Similarity=0.116  Sum_probs=57.7

Q ss_pred             cCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCc--eEEcCCCCChhHHHHHHHHc--
Q 018529          165 AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT--DFVNTSEHDRPIQEVIAEMT--  236 (354)
Q Consensus       165 ~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~--~v~~~~~~~~~~~~~i~~~~--  236 (354)
                      ....++.+||=+.+| .|..++.+|+ .|+ .|+.|+.++...+.+++    .|.+  .+ .+...|  ..+.+++..  
T Consensus       128 ~~~~~~~rVLdlf~~-tG~~sl~aa~-~GA-~V~~VD~s~~al~~a~~N~~ln~~~~~~~-~~i~~D--~~~~l~~~~~~  201 (309)
T d2igta1         128 ETADRPLKVLNLFGY-TGVASLVAAA-AGA-EVTHVDASKKAIGWAKENQVLAGLEQAPI-RWICED--AMKFIQREERR  201 (309)
T ss_dssp             HHSSSCCEEEEETCT-TCHHHHHHHH-TTC-EEEEECSCHHHHHHHHHHHHHHTCTTSCE-EEECSC--HHHHHHHHHHH
T ss_pred             hhccCCCeEEEecCC-CcHHHHHHHh-CCC-eEEEEeChHHHHHHHHHhhhhhcccCCcE-EEEeCC--HHHhHHHHhhc
Confidence            345678899987553 2334444443 588 89999999999998875    1332  22 111222  444454432  


Q ss_pred             CCCccEEEEc---cc-C------------hHhHHHHHHHhhCCCceEEEEc
Q 018529          237 NGGVDRSVEC---TG-N------------IDNMISAFECVHDGWGVAVLVG  271 (354)
Q Consensus       237 ~~~~dvv~d~---~g-~------------~~~~~~~~~~l~~~~g~~v~~g  271 (354)
                      ++.||+||--   .+ +            ..++..+...+.++ |.++++.
T Consensus       202 ~~~fD~IilDPP~f~~~~~~~~~~~~~~~~~l~~~~~~ll~~~-g~~ll~t  251 (309)
T d2igta1         202 GSTYDIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPK-ALGLVLT  251 (309)
T ss_dssp             TCCBSEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTT-CCEEEEE
T ss_pred             CCCCCEEEECCCcccccccchhHHHHHHHHHHHHHHHHhcCCC-CCEEEEe
Confidence            2379999741   11 0            12344566778886 7655553

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=86.03  E-value=0.34  Score=39.04  Aligned_cols=30  Identities=33%  Similarity=0.441  Sum_probs=26.4

Q ss_pred             EEEEcCChhHHHHHHHHHHcCCcEEEEEcCC
Q 018529          173 VAVFGLGAVGLAAAEGARIAGASRIIGVDRS  203 (354)
Q Consensus       173 vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~  203 (354)
                      |+|+|+|.+|+.++..+...|. +|+++++.
T Consensus         6 vvIIGaGi~Gls~A~~La~~G~-~V~viE~~   35 (281)
T d2gf3a1           6 VIVVGAGSMGMAAGYQLAKQGV-KTLLVDAF   35 (281)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTC-CEEEECSS
T ss_pred             EEEECcCHHHHHHHHHHHHCCC-cEEEEeCC
Confidence            7899999999998888888898 89999764

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=85.94  E-value=0.33  Score=39.27  Aligned_cols=61  Identities=25%  Similarity=0.400  Sum_probs=35.9

Q ss_pred             eEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEccc
Q 018529          172 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  248 (354)
Q Consensus       172 ~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g  248 (354)
                      +|||+|+ |-+|...+..+...|  .++++++....      +-    .|..+. +.+.+.++..   ++|+||.+++
T Consensus         2 KILItG~tGfiG~~l~~~L~~~g--~~v~~~~~~~~------~~----~Dl~~~-~~~~~~i~~~---~~D~Vih~Aa   63 (298)
T d1n2sa_           2 NILLFGKTGQVGWELQRSLAPVG--NLIALDVHSKE------FC----GDFSNP-KGVAETVRKL---RPDVIVNAAA   63 (298)
T ss_dssp             EEEEECTTSHHHHHHHHHTTTTS--EEEEECTTCSS------SC----CCTTCH-HHHHHHHHHH---CCSEEEECCC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCC--CEEEEECCCcc------cc----CcCCCH-HHHHHHHHHc---CCCEEEEecc
Confidence            5899997 999998888777666  45555443321      11    122211 1122333332   6899999886

>d1omoa_ c.2.1.13 (A:) Archaeal alanine dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Archaeal alanine dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=85.84  E-value=0.75  Score=38.09  Aligned_cols=92  Identities=18%  Similarity=0.205  Sum_probs=61.2

Q ss_pred             CCCCeEEEEcCChhHHHHHHHHH-HcCCcEEEEEcCChhhHHHH----HhcCCceEEcCCCCChhHHHHHHHHcCCCccE
Q 018529          168 ERGSSVAVFGLGAVGLAAAEGAR-IAGASRIIGVDRSSKRFEEA----KKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDR  242 (354)
Q Consensus       168 ~~~~~vlI~G~g~~G~~a~~~a~-~~g~~~vi~v~~~~~~~~~~----~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dv  242 (354)
                      +...++.|+|+|..+...++... .+..++|.+.++++++.+.+    +..+.......       .+.+     .+.|+
T Consensus       123 ~~~~~l~iiGaG~QA~~~~~al~~~~~i~~i~v~~r~~e~~~~~~~~~~~~~~~~~~~~-------~~a~-----~~aDi  190 (320)
T d1omoa_         123 KNSSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRGISASVQP-------AEEA-----SRCDV  190 (320)
T ss_dssp             TTCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTTCCEEECC-------HHHH-----TSSSE
T ss_pred             CCccEEEEecCcccHHHHHHHHHHHhhhhhcccccCCHHHHHHHHHHHHhcCCccccch-------hhhh-----ccccE
Confidence            44568889999999988777666 45777999999999886554    33454433221       1222     25899


Q ss_pred             EEEcccChHh-HHHHHHHhhCCCceEEEEcCCC
Q 018529          243 SVECTGNIDN-MISAFECVHDGWGVAVLVGVPS  274 (354)
Q Consensus       243 v~d~~g~~~~-~~~~~~~l~~~~g~~v~~g~~~  274 (354)
                      |+.++.+.+. +..  +.++++ -.+..+|...
T Consensus       191 V~taT~s~~P~~~~--~~l~~G-~hv~~iGs~~  220 (320)
T d1omoa_         191 LVTTTPSRKPVVKA--EWVEEG-THINAIGADG  220 (320)
T ss_dssp             EEECCCCSSCCBCG--GGCCTT-CEEEECSCCS
T ss_pred             EEEeccCcccccch--hhcCCC-CeEeecCCcc
Confidence            9999876432 221  347786 7888887654

>d1o58a_ c.79.1.1 (A:) O-acetylserine sulfhydrylase (Cysteine synthase) {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Thermotoga maritima [TaxId: 2336]

Probab=85.54  E-value=2.9  Score=33.74  Aligned_cols=47  Identities=21%  Similarity=0.195  Sum_probs=35.5

Q ss_pred             EEEEcCChhHHHHHHHHHHcCCcEEEEEcC--ChhhHHHHHhcCCceEE
Q 018529          173 VAVFGLGAVGLAAAEGARIAGASRIIGVDR--SSKRFEEAKKFGVTDFV  219 (354)
Q Consensus       173 vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~--~~~~~~~~~~lg~~~v~  219 (354)
                      |+...+|..|.+...+|+.+|..-++.+..  ++.|.+.++.+|++.+.
T Consensus        58 vv~~SsGN~g~a~A~~a~~~g~~~~i~~p~~~~~~k~~~~~~~GA~V~~  106 (293)
T d1o58a_          58 IVEPTSGNMGIAIAMIGAKRGHRVILTMPETMSVERRKVLKMLGAELVL  106 (293)
T ss_dssp             EEEECSSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEE
T ss_pred             eEEecCcchhhHHHHhhhhccceeEeeccccccHHHeeccccCCcEEEE
Confidence            333466999999999999999865555543  56788889999997544

>d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Adrenodoxin reductase of mitochondrial p450 systems
species: Cow (Bos taurus) [TaxId: 9913]

Probab=85.48  E-value=0.44  Score=37.12  Aligned_cols=33  Identities=18%  Similarity=0.222  Sum_probs=26.6

Q ss_pred             CeEEEEcCChhHHHHHHHHHHc--CCcEEEEEcCCh
Q 018529          171 SSVAVFGLGAVGLAAAEGARIA--GASRIIGVDRSS  204 (354)
Q Consensus       171 ~~vlI~G~g~~G~~a~~~a~~~--g~~~vi~v~~~~  204 (354)
                      .+|+|+|+|+.|+.|+..+...  |. .|++.+..+
T Consensus         2 ~kv~iIGaGpaGl~aA~~L~~~~~~~-~V~v~e~~~   36 (230)
T d1cjca2           2 PQICVVGSGPAGFYTAQHLLKHHSRA-HVDIYEKQL   36 (230)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHHCSSC-EEEEECSSS
T ss_pred             CeEEEECccHHHHHHHHHHHhcCCCC-eEEEEeCCC
Confidence            4799999999999998866544  66 888887765

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=85.32  E-value=2  Score=36.10  Aligned_cols=29  Identities=28%  Similarity=0.247  Sum_probs=22.8

Q ss_pred             eEEEEcC-ChhHHHHHH-HHHHcCCcEEEEEc
Q 018529          172 SVAVFGL-GAVGLAAAE-GARIAGASRIIGVD  201 (354)
Q Consensus       172 ~vlI~G~-g~~G~~a~~-~a~~~g~~~vi~v~  201 (354)
                      +|||+|+ |-+|...+. |++..|. .|++++
T Consensus         4 KVLITG~tGfIGs~lv~~LL~~~~~-~V~~~D   34 (383)
T d1gy8a_           4 RVLVCGGAGYIGSHFVRALLRDTNH-SVVIVD   34 (383)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHCCC-EEEEEE
T ss_pred             EEEEeCCCcHHHHHHHHHHHHhCCC-EEEEEe
Confidence            6999987 999977555 5556787 899886

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=85.23  E-value=0.8  Score=33.22  Aligned_cols=48  Identities=19%  Similarity=0.072  Sum_probs=38.1

Q ss_pred             hhhhhhhhhhhcCCCCCCeEEEE--cCChhHHHHHHHHHHcCCcEEEEEcCCh
Q 018529          154 VSTGLGATLNVAKPERGSSVAVF--GLGAVGLAAAEGARIAGASRIIGVDRSS  204 (354)
Q Consensus       154 ~~~a~~~l~~~~~~~~~~~vlI~--G~g~~G~~a~~~a~~~g~~~vi~v~~~~  204 (354)
                      +.|+...+  ..+..+++.++|+  |+|.+|+.+++++..+|. +|..+++.+
T Consensus        25 v~t~~d~l--~~~~~~~~~vvi~d~ggg~ig~e~A~~la~~G~-~Vtlv~~~~   74 (156)
T d1djqa2          25 QLTPEQVM--DGKKKIGKRVVILNADTYFMAPSLAEKLATAGH-EVTIVSGVH   74 (156)
T ss_dssp             EECHHHHH--HTCSCCCSEEEEEECCCSSHHHHHHHHHHHTTC-EEEEEESSC
T ss_pred             EECHHHHh--cCccccCCceEEEecCCChHHHHHHHHHHHcCC-eEEEEecCC
Confidence            34555543  3567788888887  779999999999999999 888887765

>d1qo8a2 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=85.23  E-value=0.36  Score=39.90  Aligned_cols=32  Identities=41%  Similarity=0.619  Sum_probs=27.6

Q ss_pred             CeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCC
Q 018529          171 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS  203 (354)
Q Consensus       171 ~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~  203 (354)
                      --|+|+|+|..|+.|+..|...|+ +|++++..
T Consensus        20 ~DVvVIGaG~aGl~AA~~aa~~G~-~V~vlEK~   51 (317)
T d1qo8a2          20 TQVLVVGAGSAGFNASLAAKKAGA-NVILVDKA   51 (317)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHHTC-CEEEECSS
T ss_pred             cCEEEECcCHHHHHHHHHHHHCCC-cEEEEeCC
Confidence            348899999999999999999999 89998754

>d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Polymyxin resistance protein ArnA, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=84.82  E-value=2.5  Score=32.11  Aligned_cols=73  Identities=18%  Similarity=0.131  Sum_probs=46.7

Q ss_pred             eEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhh----------HHHHHhcCCceEEcCCC-CChhHHHHHHHHcCCCc
Q 018529          172 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKR----------FEEAKKFGVTDFVNTSE-HDRPIQEVIAEMTNGGV  240 (354)
Q Consensus       172 ~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~----------~~~~~~lg~~~v~~~~~-~~~~~~~~i~~~~~~~~  240 (354)
                      ++++.|.+.+|..+++.+...|. .|.++.+.+++          .+++++.|... +...+ .+.++.+.+++.   .+
T Consensus         2 kiv~~~~~~~g~~~l~~L~~~g~-~I~~Vvt~~~~~~~~~~~~~~~~~a~~~~i~~-~~~~~~~~~~~~~~i~~~---~~   76 (203)
T d2blna2           2 KTVVFAYHDMGCLGIEALLAAGY-EISAIFTHTDNPGEKAFYGSVARLAAERGIPV-YAPDNVNHPLWVERIAQL---SP   76 (203)
T ss_dssp             EEEEEECHHHHHHHHHHHHHTTC-EEEEEECCCC------CCCCHHHHHHHHTCCE-ECCSCCCSHHHHHHHHHT---CC
T ss_pred             eEEEEecCHHHHHHHHHHHHCCC-CEEEEEcCCCCCCcccccCHHHHHHHHcCCcc-eecccccchhhhhhhhhh---cc
Confidence            46777988899999999998898 66554432221          35566777753 33333 234466666654   57


Q ss_pred             cEEEEcccC
Q 018529          241 DRSVECTGN  249 (354)
Q Consensus       241 dvv~d~~g~  249 (354)
                      |+++.+...
T Consensus        77 Dlii~~g~~   85 (203)
T d2blna2          77 DVIFSFYYR   85 (203)
T ss_dssp             SEEEEESCC
T ss_pred             cceeeeecc
Confidence            999876543

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.73  E-value=0.5  Score=39.32  Aligned_cols=33  Identities=30%  Similarity=0.318  Sum_probs=28.3

Q ss_pred             CeE-EEEcC-ChhHHHHHHHHHHcCCcEEEEEcCCh
Q 018529          171 SSV-AVFGL-GAVGLAAAEGARIAGASRIIGVDRSS  204 (354)
Q Consensus       171 ~~v-lI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~  204 (354)
                      ++| ||+|+ |-+|...+..+...|+ .|+++++..
T Consensus         1 kKI~LVTG~tGfIG~~l~~~Ll~~g~-~V~~i~r~~   35 (347)
T d1t2aa_           1 RNVALITGITGQDGSYLAEFLLEKGY-EVHGIVRRS   35 (347)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCC
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCcC-EEEEEECCC
Confidence            357 99987 9999999999988999 999998743

>d1onfa1 c.3.1.5 (A:1-153,A:271-376) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=84.48  E-value=0.45  Score=38.00  Aligned_cols=30  Identities=37%  Similarity=0.457  Sum_probs=27.1

Q ss_pred             EEEEcCChhHHHHHHHHHHcCCcEEEEEcCC
Q 018529          173 VAVFGLGAVGLAAAEGARIAGASRIIGVDRS  203 (354)
Q Consensus       173 vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~  203 (354)
                      ++|+|+|+.|+.|+..|..+|. +|..+++.
T Consensus         4 viVIG~G~aG~~aA~~aa~~G~-~V~liE~~   33 (259)
T d1onfa1           4 LIVIGGGSGGMAAARRAARHNA-KVALVEKS   33 (259)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTC-CEEEEESS
T ss_pred             EEEECCCHHHHHHHHHHHHCCC-eEEEEecC
Confidence            6788999999999999999999 89999864

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=84.33  E-value=1.9  Score=31.84  Aligned_cols=73  Identities=15%  Similarity=0.211  Sum_probs=43.4

Q ss_pred             CCCeEEEEcCChhHHHHH---HHHH--HcCCcEEEEEcCChhhHHHH--------HhcCCce-EEcCCCCChhHHHHHHH
Q 018529          169 RGSSVAVFGLGAVGLAAA---EGAR--IAGASRIIGVDRSSKRFEEA--------KKFGVTD-FVNTSEHDRPIQEVIAE  234 (354)
Q Consensus       169 ~~~~vlI~G~g~~G~~a~---~~a~--~~g~~~vi~v~~~~~~~~~~--------~~lg~~~-v~~~~~~~~~~~~~i~~  234 (354)
                      |+=+|.|+|+|.+|....   .+++  .+....++.+|.++++.+..        ..++... +....+    ..+.+  
T Consensus         1 p~mKI~iIGaGsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~~td----~~eaL--   74 (171)
T d1obba1           1 PSVKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKTMN----LDDVI--   74 (171)
T ss_dssp             CCCEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEESC----HHHHH--
T ss_pred             CCcEEEEECCCHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEEeCC----hhhcc--
Confidence            455788999998885422   2333  22234899999999886642        2244432 222222    33333  


Q ss_pred             HcCCCccEEEEcccCh
Q 018529          235 MTNGGVDRSVECTGNI  250 (354)
Q Consensus       235 ~~~~~~dvv~d~~g~~  250 (354)
                         .+.|+|+.+++..
T Consensus        75 ---~dad~Vv~~~~~g   87 (171)
T d1obba1          75 ---IDADFVINTAMVG   87 (171)
T ss_dssp             ---TTCSEEEECCCTT
T ss_pred             ---cCCCeEeeecccc
Confidence               3589999998753

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=84.13  E-value=0.99  Score=32.50  Aligned_cols=37  Identities=30%  Similarity=0.521  Sum_probs=29.9

Q ss_pred             CeEEEEcCChhHHHHHHHHHHcC-CcEEEEEcCChhhH
Q 018529          171 SSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRF  207 (354)
Q Consensus       171 ~~vlI~G~g~~G~~a~~~a~~~g-~~~vi~v~~~~~~~  207 (354)
                      ++|.|+|+|.+|...+..+...| +..++.++.++++.
T Consensus         2 kKI~IIGaG~VG~~~a~~l~~~~~~~elvL~Di~~~~~   39 (146)
T d1hyha1           2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANEAKV   39 (146)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHH
T ss_pred             CeEEEECcCHHHHHHHHHHHhcCCCceEEEEecccchh
Confidence            57889999999988888777666 44899999888763

>d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale cress(Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Thi4-like
domain: Thiazole biosynthetic enzyme Thi4
species: Thale cress(Arabidopsis thaliana) [TaxId: 3702]

Probab=84.03  E-value=0.31  Score=39.42  Aligned_cols=32  Identities=28%  Similarity=0.414  Sum_probs=26.1

Q ss_pred             eEEEEcCChhHHHHHH-HHHHcCCcEEEEEcCCh
Q 018529          172 SVAVFGLGAVGLAAAE-GARIAGASRIIGVDRSS  204 (354)
Q Consensus       172 ~vlI~G~g~~G~~a~~-~a~~~g~~~vi~v~~~~  204 (354)
                      -|+|+|+|+.|+.++. +|+..|. +|++++..+
T Consensus        35 DViVIGaGpaGL~aA~~LA~~~G~-~V~vlE~~~   67 (278)
T d1rp0a1          35 DVVVVGAGSAGLSAAYEISKNPNV-QVAIIEQSV   67 (278)
T ss_dssp             EEEEECCSHHHHHHHHHHHTSTTS-CEEEEESSS
T ss_pred             CEEEECCCHHHHHHHHHHHHccCC-eEEEEecCC
Confidence            3899999999998765 5666799 999998764

>d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella putrefaciens [TaxId: 24]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella putrefaciens [TaxId: 24]

Probab=83.97  E-value=0.43  Score=39.44  Aligned_cols=32  Identities=44%  Similarity=0.667  Sum_probs=27.6

Q ss_pred             eEEEEcCChhHHHHHHHHHHcCCcEEEEEcCCh
Q 018529          172 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  204 (354)
Q Consensus       172 ~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~  204 (354)
                      -|+|+|+|..|+.++..|...|+ +|++++..+
T Consensus        25 DVvVIG~G~aGl~aA~~la~~G~-~V~llEk~~   56 (322)
T d1d4ca2          25 DVVIIGSGGAGLAAAVSARDAGA-KVILLEKEP   56 (322)
T ss_dssp             SEEEECSSHHHHHHHHHHHTTTC-CEEEECSSS
T ss_pred             eEEEECcCHHHHHHHHHHHHCCC-cEEEEeCCC
Confidence            38999999999999888888999 899997643

>d2bs2a2 c.3.1.4 (A:1-250,A:372-457) Fumarate reductase {Wolinella succinogenes [TaxId: 844]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Fumarate reductase
species: Wolinella succinogenes [TaxId: 844]

Probab=83.96  E-value=0.42  Score=39.65  Aligned_cols=31  Identities=29%  Similarity=0.293  Sum_probs=27.2

Q ss_pred             EEEEcCChhHHHHHHHHHHcCCcEEEEEcCCh
Q 018529          173 VAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  204 (354)
Q Consensus       173 vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~  204 (354)
                      |+|+|+|..|+.|+..|...|+ +|++++...
T Consensus         8 VvVIG~G~AGl~AAl~aa~~G~-~V~liEK~~   38 (336)
T d2bs2a2           8 SLVIGGGLAGLRAAVATQQKGL-STIVLSLIP   38 (336)
T ss_dssp             EEEECCSHHHHHHHHHHHTTTC-CEEEECSSC
T ss_pred             EEEECcCHHHHHHHHHHHHCCC-CEEEEecCC
Confidence            8899999999999999999999 899887543

>d2gmha1 c.3.1.2 (A:4-236,A:336-482) Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=83.77  E-value=0.47  Score=40.44  Aligned_cols=32  Identities=28%  Similarity=0.484  Sum_probs=24.5

Q ss_pred             eEEEEcCChhHHHHHHHHHH------cCCcEEEEEcCCh
Q 018529          172 SVAVFGLGAVGLAAAEGARI------AGASRIIGVDRSS  204 (354)
Q Consensus       172 ~vlI~G~g~~G~~a~~~a~~------~g~~~vi~v~~~~  204 (354)
                      -|+|+|+|+.|++|+..+..      .|. +|+++++..
T Consensus        34 DViIVGgGPAGlsaA~~LA~l~~~~~~Gl-~VlllEK~~   71 (380)
T d2gmha1          34 DVVIVGAGPAGLSAATRLKQLAAQHEKDL-RVCLVEKAA   71 (380)
T ss_dssp             SEEEECCSHHHHHHHHHHHHHHHHTTCCC-CEEEECSSS
T ss_pred             CEEEECCCHHHHHHHHHHHhhhhhhcCCC-EEEEEcCCC
Confidence            57888999999886554443      688 999998754

>d1ve5a1 c.79.1.1 (A:2-311) Threonine deaminase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Threonine deaminase
species: Thermus thermophilus [TaxId: 274]

Probab=83.73  E-value=5.3  Score=32.24  Aligned_cols=50  Identities=14%  Similarity=0.165  Sum_probs=36.5

Q ss_pred             CCeEEEEcCChhHHHHHHHHHHcCCcEEEEEc--CChhhHHHHHhcCCceEE
Q 018529          170 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVD--RSSKRFEEAKKFGVTDFV  219 (354)
Q Consensus       170 ~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~--~~~~~~~~~~~lg~~~v~  219 (354)
                      ...|+...+|..|.+.+.+|+.+|.+-++.+.  .++++...++.+|+..+.
T Consensus        64 ~~~vv~aSsGN~g~a~A~~aa~~G~~~~i~vp~~~~~~~~~~~~~~Ga~vi~  115 (310)
T d1ve5a1          64 PKGLLAVSSGNHAQGVAYAAQVLGVKALVVMPEDASPYKKACARAYGAEVVD  115 (310)
T ss_dssp             CCCEEEECSSHHHHHHHHHHHHHTCCEEEECCCC--CCHHHHHHHTTCEEEC
T ss_pred             cCCccccCchhhHHHHHHHHHHcCCeEEEeecccchHHHHHHHhhhccccce
Confidence            34454456799999999999999996555553  355788888999997654

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=83.71  E-value=5.8  Score=28.29  Aligned_cols=42  Identities=26%  Similarity=0.414  Sum_probs=27.4

Q ss_pred             CeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhH-HHHHhcC
Q 018529          171 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRF-EEAKKFG  214 (354)
Q Consensus       171 ~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~-~~~~~lg  214 (354)
                      ++|-++|.|.||...+.-+...|. .++ ..++.++. ++.++.+
T Consensus         1 ekIg~IGlG~MG~~ma~~L~~~g~-~~~-~~~~~~~~~~~~~~~~   43 (156)
T d2cvza2           1 EKVAFIGLGAMGYPMAGHLARRFP-TLV-WNRTFEKALRHQEEFG   43 (156)
T ss_dssp             CCEEEECCSTTHHHHHHHHHTTSC-EEE-ECSSTHHHHHHHHHHC
T ss_pred             CeEEEEeHHHHHHHHHHHHHhCCC-EEE-EeCCHHHHHHHHHHcC
Confidence            578899999999877766666665 554 44555444 4444433

>d2cula1 c.3.1.7 (A:2-231) GidA-related protein TTHA1897 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GidA-like
domain: GidA-related protein TTHA1897
species: Thermus thermophilus [TaxId: 274]

Probab=83.59  E-value=0.66  Score=36.31  Aligned_cols=32  Identities=25%  Similarity=0.210  Sum_probs=27.3

Q ss_pred             EEEEcCChhHHHHHHHHHHcCCcEEEEEcCChh
Q 018529          173 VAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK  205 (354)
Q Consensus       173 vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~  205 (354)
                      |+|+|+|+.|+.|+..|-.+|. ++..++.+.+
T Consensus         5 VIVIGgG~AG~eAA~~aAR~G~-ktllit~~~~   36 (230)
T d2cula1           5 VLIVGAGFSGAETAFWLAQKGV-RVGLLTQSLD   36 (230)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTC-CEEEEESCGG
T ss_pred             EEEECcCHHHHHHHHHHHHCCC-cEEEEEeccc
Confidence            6788999999999999999999 7777766543

>d1qzza2 c.66.1.12 (A:102-357) Aclacinomycin-10-hydroxylase RdmB {Streptomyces purpurascens [TaxId: 1924]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Plant O-methyltransferase, C-terminal domain
domain: Aclacinomycin-10-hydroxylase RdmB
species: Streptomyces purpurascens [TaxId: 1924]

Probab=83.43  E-value=1.5  Score=34.79  Aligned_cols=101  Identities=16%  Similarity=0.064  Sum_probs=61.6

Q ss_pred             hhhcCCCCCCeEEEEcCChhHHHHHHHHHHc-CCcEEEEEcCChhhHHHH----HhcCC-ceEEcCCCCChhHHHHHHHH
Q 018529          162 LNVAKPERGSSVAVFGLGAVGLAAAEGARIA-GASRIIGVDRSSKRFEEA----KKFGV-TDFVNTSEHDRPIQEVIAEM  235 (354)
Q Consensus       162 ~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~-g~~~vi~v~~~~~~~~~~----~~lg~-~~v~~~~~~~~~~~~~i~~~  235 (354)
                      .+...+....+||=+|+|. |..+..+++.. +. ++++++. ++-.+.+    .+.|. +++..... +  +   ....
T Consensus        74 ~~~~d~~~~~~vlDvG~G~-G~~~~~l~~~~P~~-~~~~~Dl-p~~~~~a~~~~~~~~~~~ri~~~~~-d--~---~~~~  144 (256)
T d1qzza2          74 ADAYDWSAVRHVLDVGGGN-GGMLAAIALRAPHL-RGTLVEL-AGPAERARRRFADAGLADRVTVAEG-D--F---FKPL  144 (256)
T ss_dssp             HHTSCCTTCCEEEEETCTT-SHHHHHHHHHCTTC-EEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEEC-C--T---TSCC
T ss_pred             HhcCCCccCCEEEEECCCC-CHHHHHHHHhhcCc-EEEEecC-hHHHHHHHHHHhhcCCcceeeeeee-e--c---cccc
Confidence            3445567778898888864 78888999987 45 8899986 4444433    33343 22211111 1  1   0011


Q ss_pred             cCCCccEEEEccc-----C---hHhHHHHHHHhhCCCceEEEEcCC
Q 018529          236 TNGGVDRSVECTG-----N---IDNMISAFECVHDGWGVAVLVGVP  273 (354)
Q Consensus       236 ~~~~~dvv~d~~g-----~---~~~~~~~~~~l~~~~g~~v~~g~~  273 (354)
                       +.++|+|+-.--     .   ...++.+.+.|+++ |+++++...
T Consensus       145 -p~~~D~v~~~~vLh~~~d~~~~~lL~~i~~~Lkpg-G~llI~d~~  188 (256)
T d1qzza2         145 -PVTADVVLLSFVLLNWSDEDALTILRGCVRALEPG-GRLLVLDRA  188 (256)
T ss_dssp             -SCCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEE-EEEEEEECC
T ss_pred             -cccchhhhccccccccCcHHHHHHHHHHHhhcCCc-ceeEEEEec
Confidence             236898875321     1   14577889999997 999988653

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=83.27  E-value=1.1  Score=32.29  Aligned_cols=81  Identities=19%  Similarity=0.149  Sum_probs=41.1

Q ss_pred             eEEEEcC-ChhHHHHHHHHH-Hc--CCcEEEEEcCChhhHHHHHhcCCc-eEEcCCCCChhHHHHHHHHcCCCccEEEEc
Q 018529          172 SVAVFGL-GAVGLAAAEGAR-IA--GASRIIGVDRSSKRFEEAKKFGVT-DFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  246 (354)
Q Consensus       172 ~vlI~G~-g~~G~~a~~~a~-~~--g~~~vi~v~~~~~~~~~~~~lg~~-~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~  246 (354)
                      +|.|+|+ |.+|+-.++++. +.  -...++...++..........+-. .+...  .+  ..    .+  .++|++|-|
T Consensus         3 kVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~~~~~~~~~~~~~--~~--~~----~~--~~~DivF~a   72 (146)
T d1t4ba1           3 NVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPSFGGTTGTLQDA--FD--LE----AL--KALDIIVTC   72 (146)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCGGGTCCCBCEET--TC--HH----HH--HTCSEEEEC
T ss_pred             EEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeeccccccccccccCCceeeecc--cc--hh----hh--hcCcEEEEe
Confidence            6889998 999999997543 32  333566565443221111111111 11111  11  11    11  258999999


Q ss_pred             ccChHhHHHHHHHhhC
Q 018529          247 TGNIDNMISAFECVHD  262 (354)
Q Consensus       247 ~g~~~~~~~~~~~l~~  262 (354)
                      ++.....+..-.....
T Consensus        73 ~~~~~s~~~~~~~~~~   88 (146)
T d1t4ba1          73 QGGDYTNEIYPKLRES   88 (146)
T ss_dssp             SCHHHHHHHHHHHHHT
T ss_pred             cCchHHHHhhHHHHhc
Confidence            9884343444444444

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=83.23  E-value=0.98  Score=37.39  Aligned_cols=34  Identities=18%  Similarity=0.312  Sum_probs=29.3

Q ss_pred             CCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcC
Q 018529          168 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR  202 (354)
Q Consensus       168 ~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~  202 (354)
                      ...+++||+|+ |-+|...+..+...|. .|+++++
T Consensus        14 ~~~k~iLVTG~tGfIGs~lv~~L~~~g~-~V~~~d~   48 (341)
T d1sb8a_          14 AQPKVWLITGVAGFIGSNLLETLLKLDQ-KVVGLDN   48 (341)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEEC
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCcC-EEEEEEC
Confidence            34578999987 9999999999999999 8999865

>d2g72a1 c.66.1.15 (A:18-280) Phenylethanolamine N-methyltransferase, PNMTase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arylamine N-methyltransferase
domain: Phenylethanolamine N-methyltransferase, PNMTase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.19  E-value=0.27  Score=39.58  Aligned_cols=45  Identities=16%  Similarity=0.018  Sum_probs=33.2

Q ss_pred             CCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh
Q 018529          166 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK  212 (354)
Q Consensus       166 ~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~  212 (354)
                      +..+|.++|=+|+|+ |...+..+...+. +|++++.++...+.+++
T Consensus        51 g~~~g~~vLDiGcG~-g~~~~~~~~~~~~-~v~~~D~S~~~i~~~~~   95 (263)
T d2g72a1          51 GEVSGRTLIDIGSGP-TVYQLLSACSHFE-DITMTDFLEVNRQELGR   95 (263)
T ss_dssp             SCSCCSEEEEETCTT-CCGGGTTGGGGCS-EEEEECSCHHHHHHHHH
T ss_pred             CCCCCcEEEEeccCC-CHHHHHHhcccCC-eEEEEeCCHHHHHHHHH
Confidence            556788999999976 4444444444444 89999999999998865

>d1np3a2 c.2.1.6 (A:1-182) Class I ketol-acid reductoisomerase (KARI) {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Class I ketol-acid reductoisomerase (KARI)
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=82.75  E-value=7.2  Score=28.62  Aligned_cols=76  Identities=21%  Similarity=0.340  Sum_probs=56.5

Q ss_pred             CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEccc
Q 018529          169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  248 (354)
Q Consensus       169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g  248 (354)
                      ++++|.|+|-|+=|.+.++=++-.|.+.+++........+.+++-|... ..       +.+.++.     .|+|.-.++
T Consensus        15 k~k~IaViGYGsQG~AhAlNLrDSG~~V~VGLr~gs~s~~~A~~~Gf~v-~~-------~~eA~~~-----aDiim~L~P   81 (182)
T d1np3a2          15 QGKKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSGSATVAKAEAHGLKV-AD-------VKTAVAA-----ADVVMILTP   81 (182)
T ss_dssp             HTSCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHTTCEE-EC-------HHHHHHT-----CSEEEECSC
T ss_pred             CCCEEEEEeeCcHhHHHHhhhhhcCCCEEEEcCCCCccHHHHhhhcccc-cc-------HHHHhhh-----cCeeeeecc
Confidence            4789999999999999999999999977777765556778888888753 21       4444433     799998887


Q ss_pred             ChHhHHHHHH
Q 018529          249 NIDNMISAFE  258 (354)
Q Consensus       249 ~~~~~~~~~~  258 (354)
                      . +.....++
T Consensus        82 D-~~q~~vy~   90 (182)
T d1np3a2          82 D-EFQGRLYK   90 (182)
T ss_dssp             H-HHHHHHHH
T ss_pred             h-HHHHHHHH
Confidence            5 44445553

>d2b3ta1 c.66.1.30 (A:2-275) N5-glutamine methyltransferase, HemK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Escherichia coli [TaxId: 562]

Probab=82.62  E-value=1.9  Score=34.57  Aligned_cols=72  Identities=17%  Similarity=0.168  Sum_probs=45.2

Q ss_pred             CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCceEEcCCCCChhHHHHHHHHcCCCccEEE
Q 018529          169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSV  244 (354)
Q Consensus       169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~  244 (354)
                      .+-+||=+|+|. |..++.+|+......|++++.+++..+.+++    ++...+-....+   +.+   .+.++.||+|+
T Consensus       108 ~~~~vlDlGtGS-G~I~i~la~~~p~~~v~avDis~~Al~~A~~Na~~~~~~~v~~~~~d---~~~---~~~~~~fDlIv  180 (274)
T d2b3ta1         108 QPCRILDLGTGT-GAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSD---WFS---ALAGQQFAMIV  180 (274)
T ss_dssp             SCCEEEEETCTT-SHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCS---TTG---GGTTCCEEEEE
T ss_pred             cccceeeeehhh-hHHHHHHHhhCCcceeeeccchhHHHhHHHHHHHHhCcccceeeecc---ccc---ccCCCceeEEE
Confidence            345666667643 6666677777644499999999999888754    666544322222   211   12334899998


Q ss_pred             Ecc
Q 018529          245 ECT  247 (354)
Q Consensus       245 d~~  247 (354)
                      ..-
T Consensus       181 sNP  183 (274)
T d2b3ta1         181 SNP  183 (274)
T ss_dssp             ECC
T ss_pred             ecc
Confidence            753

>d1ebfa1 c.2.1.3 (A:2-150,A:341-359) Homoserine dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Homoserine dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=82.55  E-value=5.7  Score=28.92  Aligned_cols=91  Identities=15%  Similarity=0.090  Sum_probs=51.2

Q ss_pred             eEEEEcCChhHHHHHHHHHHcC--Cc-EEEEEcCChhh---------------HHHHHhcCCceEEcCCCCChhHHHHHH
Q 018529          172 SVAVFGLGAVGLAAAEGARIAG--AS-RIIGVDRSSKR---------------FEEAKKFGVTDFVNTSEHDRPIQEVIA  233 (354)
Q Consensus       172 ~vlI~G~g~~G~~a~~~a~~~g--~~-~vi~v~~~~~~---------------~~~~~~lg~~~v~~~~~~~~~~~~~i~  233 (354)
                      +|.|+|.|.+|...+++.....  .+ +++++..+...               .+.+.....      ....  ......
T Consensus         6 ~I~l~G~G~VG~~l~~~l~~~~~~l~~~v~~i~~s~~~~~~~~g~~~~~~~~~~~~~~~~~~------~~~~--~~~~~~   77 (168)
T d1ebfa1           6 NVAVIGAGVVGSAFLDQLLAMKSTITYNLVLLAEAERSLISKDFSPLNVGSDWKAALAASTT------KTLP--LDDLIA   77 (168)
T ss_dssp             EEEEECCSHHHHHHHHHHHHCCCSSEEEEEEEECSSBEEECSSCSCCSCTTCHHHHHHTCCC------BCCC--HHHHHH
T ss_pred             EEEEEeCCHHHHHHHHHHHHhHHHhhhheEEEEEeeeeeecccccchHhhhhhhhhhhhccc------cccc--HHHHHH
Confidence            5678899999999888777543  21 56665432211               111111111      1111  111122


Q ss_pred             HHcCC-CccEEEEcccChHhHHHHHHHhhCCCceEEEEc
Q 018529          234 EMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVG  271 (354)
Q Consensus       234 ~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g  271 (354)
                      ..... ..++++||+++.+......+.|..+ -.+|...
T Consensus        78 ~~~~~~~~~vivd~t~~~~~~~~~~~aL~~G-~hVVTAN  115 (168)
T d1ebfa1          78 HLKTSPKPVILVDNTSSAYIAGFYTKFVENG-ISIATPN  115 (168)
T ss_dssp             HHTTCSSCEEEEECSCCHHHHTTHHHHHHTT-CEEECCC
T ss_pred             HhccCCCceEEEEecCChHHHHHHHHHHHcC-CeEEecC
Confidence            22223 6789999999987777777888885 5665543

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=82.40  E-value=1.1  Score=31.96  Aligned_cols=38  Identities=18%  Similarity=0.195  Sum_probs=29.7

Q ss_pred             CeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHH
Q 018529          171 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFE  208 (354)
Q Consensus       171 ~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~  208 (354)
                      .+|.|+|+|.+|...+.++...+...++.++.++++.+
T Consensus         2 ~KI~IIGaG~VG~~~A~~l~~~~l~dl~l~D~~~~~~~   39 (142)
T d1uxja1           2 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVEGVPQ   39 (142)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHHTCSEEEEECSSSSHHH
T ss_pred             CeEEEECCCHHHHHHHHHHHhCCcceEEEEeeccccch
Confidence            37888999999998777776667658999998776543

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.24  E-value=1.5  Score=38.91  Aligned_cols=34  Identities=15%  Similarity=0.224  Sum_probs=28.9

Q ss_pred             CeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCCh
Q 018529          171 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  204 (354)
Q Consensus       171 ~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~  204 (354)
                      .+|+|+|+|++|.-++.-+-..|.++++.+|.+.
T Consensus        26 s~VlvvG~gglG~Ei~knLvl~GVg~itivD~d~   59 (529)
T d1yova1          26 AHVCLINATATGTEILKNLVLPGIGSFTIIDGNQ   59 (529)
T ss_dssp             CEEEECCCSHHHHHHHHHHHTTTCSEEEEECCSB
T ss_pred             CCEEEECCCHHHHHHHHHHHHhcCCEEEEEcCCc
Confidence            5899999999999888888888998999887543

>d2a14a1 c.66.1.15 (A:5-261) Indolethylamine N-methyltransferase, INMT {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arylamine N-methyltransferase
domain: Indolethylamine N-methyltransferase, INMT
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.06  E-value=0.076  Score=42.63  Aligned_cols=45  Identities=20%  Similarity=0.138  Sum_probs=32.7

Q ss_pred             CCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh
Q 018529          166 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK  212 (354)
Q Consensus       166 ~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~  212 (354)
                      ...+|.+||=+|||. |..+..++.. +...|++++.++...+.+++
T Consensus        48 ~~~~g~~vLDlGcG~-G~~~~~~~~~-~~~~v~giD~S~~~i~~a~~   92 (257)
T d2a14a1          48 GGLQGDTLIDIGSGP-TIYQVLAACD-SFQDITLSDFTDRNREELEK   92 (257)
T ss_dssp             TSCCEEEEEESSCTT-CCGGGTTGGG-TEEEEEEEESCHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCC-CHhHHHHhcc-ccCcEEEecCCHHHHHHHHH
Confidence            456788888889875 4444445444 44489999999999888765

>d1xdza_ c.66.1.20 (A:) Glucose-inhibited division protein B (GidB) {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Glucose-inhibited division protein B (GidB)
domain: Glucose-inhibited division protein B (GidB)
species: Bacillus subtilis [TaxId: 1423]

Probab=81.74  E-value=1.4  Score=34.54  Aligned_cols=99  Identities=14%  Similarity=0.109  Sum_probs=60.6

Q ss_pred             CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCceEEcCCCCChhHHHHHHHH--cCCCcc
Q 018529          168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEM--TNGGVD  241 (354)
Q Consensus       168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~~--~~~~~d  241 (354)
                      ..+.+++=+|+|+ |.=.+-+|-...-.+++.++++..|..+++.    +|...+......   . +.+...  ..+.||
T Consensus        69 ~~~~~ilDiGSGa-GfPGi~laI~~p~~~v~Lves~~KK~~FL~~v~~~L~L~n~~i~~~R---~-E~~~~~~~~~~~~D  143 (239)
T d1xdza_          69 NQVNTICDVGAGA-GFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDR---A-ETFGQRKDVRESYD  143 (239)
T ss_dssp             GGCCEEEEECSSS-CTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESC---H-HHHTTCTTTTTCEE
T ss_pred             cCCCeEEeecCCC-chHHHHHHHhCCCccceeecchHHHHHHHHHHHHHhCCCCcEEEeeh---h-hhccccccccccce
Confidence            4566777777643 4444455555544499999999999999754    676544332221   1 112111  123689


Q ss_pred             EEEE-cccC-hHhHHHHHHHhhCCCceEEEEcC
Q 018529          242 RSVE-CTGN-IDNMISAFECVHDGWGVAVLVGV  272 (354)
Q Consensus       242 vv~d-~~g~-~~~~~~~~~~l~~~~g~~v~~g~  272 (354)
                      +|.. +++. +..++.+...++++ |+++++=.
T Consensus       144 ~v~sRAva~l~~ll~~~~~~l~~~-g~~i~~KG  175 (239)
T d1xdza_         144 IVTARAVARLSVLSELCLPLVKKN-GLFVALKA  175 (239)
T ss_dssp             EEEEECCSCHHHHHHHHGGGEEEE-EEEEEEEC
T ss_pred             EEEEhhhhCHHHHHHHHhhhcccC-CEEEEECC
Confidence            9985 4443 34667777888887 98887743

>d1mo9a1 c.3.1.5 (A:2-192,A:314-383) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=81.56  E-value=0.68  Score=36.89  Aligned_cols=32  Identities=31%  Similarity=0.335  Sum_probs=27.3

Q ss_pred             eEEEEcCChhHHHHHHHHHHcCCcEEEEEcCCh
Q 018529          172 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  204 (354)
Q Consensus       172 ~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~  204 (354)
                      -++|+|+|+.|+.++..+..+|. +|++++..+
T Consensus        44 DvvVIGgG~aG~~aA~~~a~~G~-kv~vve~~~   75 (261)
T d1mo9a1          44 DAIFIGGGAAGRFGSAYLRAMGG-RQLIVDRWP   75 (261)
T ss_dssp             SEEEECCSHHHHHHHHHHHHTTC-CEEEEESSS
T ss_pred             CEEEECCCHHHHHHHHHHHHCCC-eEEEEeccC
Confidence            47888999999999999999999 788887643

>d1vl6a1 c.2.1.7 (A:155-376) Malate oxidoreductase (malic enzyme) {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Malate oxidoreductase (malic enzyme)
species: Thermotoga maritima [TaxId: 2336]

Probab=81.41  E-value=1.8  Score=33.44  Aligned_cols=39  Identities=28%  Similarity=0.350  Sum_probs=32.7

Q ss_pred             cCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCC
Q 018529          165 AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS  203 (354)
Q Consensus       165 ~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~  203 (354)
                      ..--...++++.|+|..|....++....+.++++.+|+.
T Consensus        21 g~~l~d~riv~~GAGsAg~gia~~l~~~~~~~i~~~D~~   59 (222)
T d1vl6a1          21 EKKIEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK   59 (222)
T ss_dssp             TCCTTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred             CCChhhcEEEEEChHHHHHHHHHHHHHhcccceEeecce
Confidence            344566788999999999999999998899899999875

>d1jsxa_ c.66.1.20 (A:) Glucose-inhibited division protein B (GidB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Glucose-inhibited division protein B (GidB)
domain: Glucose-inhibited division protein B (GidB)
species: Escherichia coli [TaxId: 562]

Probab=81.30  E-value=0.98  Score=34.68  Aligned_cols=93  Identities=13%  Similarity=0.154  Sum_probs=58.3

Q ss_pred             CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCce--EEcCCCCChhHHHHHHHHcCC-Ccc
Q 018529          169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD--FVNTSEHDRPIQEVIAEMTNG-GVD  241 (354)
Q Consensus       169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~~--v~~~~~~~~~~~~~i~~~~~~-~~d  241 (354)
                      ++++++=+|+|+ |.=.+-+|...--.+++.++++..|..++++    +|...  +++.+..+         .... .||
T Consensus        65 ~~~~ilDiGsGa-G~PGi~laI~~p~~~~~Lves~~KK~~FL~~~~~~L~L~nv~v~~~R~E~---------~~~~~~fD  134 (207)
T d1jsxa_          65 QGERFIDVGTGP-GLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEE---------FPSEPPFD  134 (207)
T ss_dssp             CSSEEEEETCTT-TTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTT---------SCCCSCEE
T ss_pred             cCCceeeeeccC-CceeeehhhhcccceEEEEecchHHHHHHHHHHHHcCCcceeeeccchhh---------hccccccc
Confidence            356777777643 4444455555433399999999999998854    77653  34333222         1123 689


Q ss_pred             EEEE-cccCh-HhHHHHHHHhhCCCceEEEEcC
Q 018529          242 RSVE-CTGNI-DNMISAFECVHDGWGVAVLVGV  272 (354)
Q Consensus       242 vv~d-~~g~~-~~~~~~~~~l~~~~g~~v~~g~  272 (354)
                      +|.. +++.. ..++.+...++++ |+++++-.
T Consensus       135 ~V~sRA~~~~~~ll~~~~~~l~~~-g~~~~~KG  166 (207)
T d1jsxa_         135 GVISRAFASLNDMVSWCHHLPGEQ-GRFYALKG  166 (207)
T ss_dssp             EEECSCSSSHHHHHHHHTTSEEEE-EEEEEEES
T ss_pred             eehhhhhcCHHHHHHHHHHhcCCC-cEEEEECC
Confidence            8874 44443 4566667778887 99887743

>d2ifta1 c.66.1.46 (A:11-193) Putative methylase HI0767 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methylase HI0767
species: Haemophilus influenzae [TaxId: 727]

Probab=80.37  E-value=1.1  Score=33.57  Aligned_cols=69  Identities=16%  Similarity=0.115  Sum_probs=43.9

Q ss_pred             CCCeEEEE--cCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCc---eEEcCCCCChhHHHHHHHHcCC-
Q 018529          169 RGSSVAVF--GLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT---DFVNTSEHDRPIQEVIAEMTNG-  238 (354)
Q Consensus       169 ~~~~vlI~--G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~---~v~~~~~~~~~~~~~i~~~~~~-  238 (354)
                      .+.+||=+  |+|++|+-|+    ..|+..|+.++.+.+..+.+++    ++..   ..+...+    ..+.++..... 
T Consensus        43 ~~~~vLDlFaGsG~~glEal----SRGA~~v~fVE~~~~a~~~ik~Ni~~l~~~~~~~~~~~~d----~~~~l~~~~~~~  114 (183)
T d2ifta1          43 HQSECLDGFAGSGSLGFEAL----SRQAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQS----SLDFLKQPQNQP  114 (183)
T ss_dssp             TTCEEEETTCTTCHHHHHHH----HTTCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSC----HHHHTTSCCSSC
T ss_pred             ccceEeecccCccceeeeee----eecceeeEEeecccchhhhHhhHHhhhccccccccccccc----ccccccccccCC
Confidence            34556554  5588887654    6799999999999998877754    5542   2222211    44444443334 


Q ss_pred             CccEEEE
Q 018529          239 GVDRSVE  245 (354)
Q Consensus       239 ~~dvv~d  245 (354)
                      .||+||-
T Consensus       115 ~fDlIFl  121 (183)
T d2ifta1         115 HFDVVFL  121 (183)
T ss_dssp             CEEEEEE
T ss_pred             cccEEEe
Confidence            7999975

>d1v71a1 c.79.1.1 (A:6-323) Hypothetical protein C320.14 (SPCC320.14, SPCC330.15c) {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Hypothetical protein C320.14 (SPCC320.14, SPCC330.15c)
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=80.36  E-value=3.5  Score=33.52  Aligned_cols=47  Identities=19%  Similarity=0.150  Sum_probs=35.4

Q ss_pred             EEEc-CChhHHHHHHHHHHcCCcEEEEEc--CChhhHHHHHhcCCceEEc
Q 018529          174 AVFG-LGAVGLAAAEGARIAGASRIIGVD--RSSKRFEEAKKFGVTDFVN  220 (354)
Q Consensus       174 lI~G-~g~~G~~a~~~a~~~g~~~vi~v~--~~~~~~~~~~~lg~~~v~~  220 (354)
                      +|.+ +|..|.+.+.+|+.+|.+-++.+.  .++++.+.++.+|++.+..
T Consensus        72 vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~k~~~l~~~Ga~vi~~  121 (318)
T d1v71a1          72 VLTFSSGNHAQAIALSAKILGIPAKIIMPLDAPEAKVAATKGYGGQVIMY  121 (318)
T ss_dssp             EEECCSSHHHHHHHHHHHHTTCCEEEEEETTCCHHHHHHHHHTTCEEEEE
T ss_pred             eeeeccchhhHHHHHhhcccccceeecccccccHHHHHHHHHcCCcEEec
Confidence            4444 599999999999999986555553  3567888889999976553

>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Thermotoga maritima [TaxId: 2336]

Probab=80.09  E-value=4.3  Score=29.42  Aligned_cols=70  Identities=11%  Similarity=0.029  Sum_probs=41.1

Q ss_pred             eEEEEcCChhHHH--HHHHHHHc---CCcEEEEEcCChhhHHHHHhc------CCceEEcCCCCChhHHHHHHHHcCCCc
Q 018529          172 SVAVFGLGAVGLA--AAEGARIA---GASRIIGVDRSSKRFEEAKKF------GVTDFVNTSEHDRPIQEVIAEMTNGGV  240 (354)
Q Consensus       172 ~vlI~G~g~~G~~--a~~~a~~~---g~~~vi~v~~~~~~~~~~~~l------g~~~v~~~~~~~~~~~~~i~~~~~~~~  240 (354)
                      +|.|+|+|.+|..  ...+++..   ....++.+|.++++.+....+      ....+....+    ..+.+     .+.
T Consensus         2 KIaiIGaGs~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~d~~~~~~~~~~~~~~t~~----~~~~l-----~~a   72 (162)
T d1up7a1           2 RIAVIGGGSSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKVLISDT----FEGAV-----VDA   72 (162)
T ss_dssp             EEEEETTTCTTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHHTTSSEEEECSS----HHHHH-----TTC
T ss_pred             EEEEECCCHHHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHHHHHHhhhccCceEEEecC----ccccc-----CCC
Confidence            4788999866643  33333332   234899999999987755331      1222332222    22322     358


Q ss_pred             cEEEEcccCh
Q 018529          241 DRSVECTGNI  250 (354)
Q Consensus       241 dvv~d~~g~~  250 (354)
                      |+|+.++|.+
T Consensus        73 DvVVita~~~   82 (162)
T d1up7a1          73 KYVIFQFRPG   82 (162)
T ss_dssp             SEEEECCCTT
T ss_pred             CEEEEecccC
Confidence            9999998864

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=80.03  E-value=7.9  Score=27.35  Aligned_cols=70  Identities=23%  Similarity=0.173  Sum_probs=39.6

Q ss_pred             eEEEEcC-ChhHHHHHHHHH-HcC-CcEEEEEcCChhhHHHHHhc---C--C-ceEEcCCCCChhHHHHHHHHcCCCccE
Q 018529          172 SVAVFGL-GAVGLAAAEGAR-IAG-ASRIIGVDRSSKRFEEAKKF---G--V-TDFVNTSEHDRPIQEVIAEMTNGGVDR  242 (354)
Q Consensus       172 ~vlI~G~-g~~G~~a~~~a~-~~g-~~~vi~v~~~~~~~~~~~~l---g--~-~~v~~~~~~~~~~~~~i~~~~~~~~dv  242 (354)
                      +|.|+|+ |.+|...+.++. ..+ ...+..++..+.....+.++   .  . ...+ ....+  .. .+     .+.|+
T Consensus         2 KV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~~~~g~a~Dl~h~~~~~~~~~~-~~~~~--~~-~~-----~~aDv   72 (145)
T d2cmda1           2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGF-SGEDA--TP-AL-----EGADV   72 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSSTTHHHHHHHHHTSCSSCEEEEE-CSSCC--HH-HH-----TTCSE
T ss_pred             EEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccccchhHHHHHHCCccccCCcEE-EcCCC--cc-cc-----CCCCE
Confidence            5789995 999987766543 434 34788888765433333222   1  1 1122 12222  21 22     25899


Q ss_pred             EEEcccCh
Q 018529          243 SVECTGNI  250 (354)
Q Consensus       243 v~d~~g~~  250 (354)
                      |+-+.|.+
T Consensus        73 vvitaG~~   80 (145)
T d2cmda1          73 VLISAGVR   80 (145)
T ss_dssp             EEECCSCC
T ss_pred             EEECCCcc
Confidence            99999864