Citrus Sinensis ID: 018596

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350---
Protein Sequence
MNAFSHVPPGFRFHPTDEELVDYYLRKKITSRRIDLDVIKDVDLYKIEPWDLQELCRIGTEEQNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIYSKHDLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLETDENGTPQEEGWVVCRVFKKRITTMRKVSEHESPCWYDDQVSFMQDLDSPKPNSQHSNLAYHIPYGCKKELDHHLQYQVPHEHFLQLPLLESPKLMQTASNVNGNPMTAYGLDMNHASTLQQSSSLTHEEHMQQNLQFFGRDQNYEQAVDQVTDWRVLDKFVASQLSQEDSIAANNNVFRGNEQTNNVLVRQLMNKQEMAPENASTSTSSCQIDLWK
Secondary Structure (PSIPRED)
ccccccccccccccccHHHHHHHHHHHHHcccccccccEEcccccccccccccHHcccccccccEEEEEccccccccccccccccccccccccccccccccccccEEEEEEEEEEcccccccccccccEEEEEccccccccccccccEEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHccccccccccccccccccccHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHcccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccHHHHHHHHHHHHHccccccccEEEHEccccccccccHHHccccccccccEEEEccccccccccccccHHcccccEEcccccccEcccccEEEEEEEEEEEcccccccccccEEEEEEEcccccccccccccEEEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHcccccccccccccccccccccccHHHHHcccccccccHcccccccccccccc
Coil and Loop (DISEMBL)
mnafshvppgfrfhptdEELVDYYLRKKITsrridldvikdvdlykiepwdlqELCRIgteeqnewyffshkdkkyptgtrtnrattagfwkatgrdkaiyskhdliGMRKTLVFykgrapngqksdwIMHEYRletdengtpqeegWVVCRVFKKRITTMRKVsehespcwyddqvsfmqdldspkpnsqhsnlayhipygckkeldhhlqyqvphehflqlpllespklmqtasnvngnpmtaygldmnhastlqqsssltHEEHMQQNLQffgrdqnyEQAVDQVTDWRVLDKFVASqlsqedsiaannnvfrgneQTNNVLVRQLMnkqemapenaststsscqidlwk
Flexible Loop (DISEMBL)
mnafshvppgfrfhptdeELVDYYLRkkitsrridldvikdvdlykiepWDLQELCRIGTEeqnewyffshkdkkyptgtrtnrattagfwkatgrdkaiyskhdliGMRKTLVFYKGRAPNGQKSDWIMHEYRLEtdengtpqeegwvVCRVFKKRITTMrkvsehespcWYDDQVSFMQDLDSPKPNSQHSNLAYHIPYGCKKELDHHLQYQVPHEHFLQLPLLESPKLMQTASNVNGNPMTAYGLDMNHASTLQQSSSLTHEEHMQQNLQFFGRDQNYEQAVDQVTDWRVLDKFVASqlsqedsiaannnvfrgnEQTNNVLVRQLMNKQemapenaststsscqidlwk
Low Complexity Region (SEG)
MNAFSHVPPGFRFHPTDEELVDYYLRKKITSRRIDLDVIKDVDLYKIEPWDLQELCRIGTEEQNEWYFFSHKDKKYPtgtrtnrattagFWKATGRDKAIYSKHDLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLETDENGTPQEEGWVVCRVFKKRITTMRKVSEHESPCWYDDQVSFMQDLDSPKPNSQHSNLAYHIPYGCKKELDHHLQYQVPHEHFLQLPLLESPKLMQTASNVNGNPMTAYGLDMNHASTLQQSSSLTHEEHMQQNLQFFGRDQNYEQAVDQVTDWRVLDKFVASQLSQEDSIAANNNVFRGNEQTNNVLVRQLMNKQEMAPENASTSTSSCQIDLWK
Disordered region (IsUnstruct)
**********FRFHPTDEELVDYYLRKKITSRRIDLDVIKDVDLYKIEPWDLQELCRIGTEEQNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIYSKHDLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLET******QEEGWVVCRVFKKRITTMRKVSEHESPCWYDDQVSF**************NLAYHIPYGCKKELDHHLQYQVPHEHFLQLPLLE********************************************LQFFGRDQNYEQAVDQVTDWRVLDKFVASQL***************************************************
Disordered Region (DISOPRED)
****SHV*PGFRFHPTDEELVDYYLRKKITSRRIDLDVIKDVDLYKIEPWDLQELCRIGTEEQNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIYSKHDLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLET*****PQE*GWVVCRVFK*************************************************************************************************************************************TDWRVLDKFVA***********************************************CQIDLWK
Disordered Region (DISEMBL)
MNAFSHVPPGFRFHPTDEELVDYYLRKKITSRRIDLDVIKDVDLYKIEPWDLQELCRIGTEEQNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIYSKHDLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLETDENGTPQEEGWVVCRVFKKRITTMRKVSEHESPCWYDDQVSFMQDLDSPKPNSQHSNLAYHIPYGCKKELDHHLQYQVPHEHFLQLPLLESPKLMQTASNVNGNPMTAYGLDMNHASTLQQSSSLTHEEHMQQNLQFFGRDQNYEQAVDQVTDWRVLDKFVASQLSQEDSIAANNNVFRGNEQTNNVLVRQLMNKQ********************
Disordered Region (DISPRO)
*****HVPPGFRFHPTDEELVDYYLRKKITSRRIDLDVIKDVDLYKIEPWDLQELCRIGTEEQNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIYSKHDLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLETDENGTPQEEGWVVCRVFKKRI*******************************************GCK****HHLQYQVPHEHFLQLPLLESPKLMQTASNVNGNPMTAYGLD*****************HMQQNLQFF**********DQVTDWRVLDKFVASQLS**************************************************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MNAFSHVPPGFRFHPTDEELVDYYLRKKITSRRIDLDVIKDVDLYKIEPWDLQELCRIGTEEQNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIYSKHDLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLETDENGTPQEEGWVVCRVFKKRITTMRKVSEHESPCWYDDQVSFMQDLDSPKPNSQHSNLAYHIPYGCKKELDHHLQYQVPHEHFLQLPLLESPKLMQTASNVNGNPMTAYGLDMNHASTLQQSSSLTHEEHMQQNLQFFGRDQNYEQAVDQVTDWRVLDKFVASQLSQEDSIAANNNVFRGNEQTNNVLVRQLMNKQEMAPENASTSTSSCQIDLWK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	353	2.2.26 [Sep-21-2011]
Q9FWX2	395	NAC domain-containing pro	yes	no	0.997	0.891	0.580	1e-121
Q84WP6	365	NAC domain-containing pro	no	no	0.779	0.753	0.469	7e-70
Q9M274	334	NAC domain-containing pro	no	no	0.436	0.461	0.687	8e-67
Q9LPI7	358	NAC domain-containing pro	no	no	0.827	0.815	0.439	1e-65
Q9SV87	341	Protein BEARSKIN1 OS=Arab	no	no	0.427	0.442	0.718	4e-65
Q9C878	305	Protein BEARSKIN1 OS=Arab	no	no	0.424	0.491	0.728	2e-64
Q5Z6B6	276	NAC domain-containing pro	no	no	0.424	0.543	0.756	3e-64
Q9MA17	371	Protein SOMBRERO OS=Arabi	no	no	0.424	0.404	0.730	6e-63
Q9FLJ2	336	NAC domain-containing pro	no	no	0.413	0.434	0.567	6e-48
O49255	268	NAC transcription factor	no	no	0.424	0.559	0.540	2e-47

>sp|Q9FWX2|NAC7_ARATH NAC domain-containing protein 7 OS=Arabidopsis thaliana GN=NAC007 PE=2 SV=2

 Score =  434 bits (1115), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 230/396 (58%), Positives = 276/396 (69%), Gaps = 44/396 (11%)

Query: 1   MNAFSHVPPGFRFHPTDEELVDYYLRKKITSRRIDLDVIKDVDLYKIEPWDLQELCRIGT 60
           MN+FSHVPPGFRFHPTDEELVDYYLRKK+ S+RI++D IKD+DLYKIEPWDLQELC+IG 
Sbjct: 1   MNSFSHVPPGFRFHPTDEELVDYYLRKKVASKRIEIDFIKDIDLYKIEPWDLQELCKIGH 60

Query: 61  EEQNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIYSKHDLIGMRKTLVFYKGRA 120
           EEQ++WYFFSHKDKKYPTGTRTNRAT AGFWKATGRDKAIY +H LIGMRKTLVFYKGRA
Sbjct: 61  EEQSDWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYLRHSLIGMRKTLVFYKGRA 120

Query: 121 PNGQKSDWIMHEYRLETDENGTPQEEGWVVCRVFKKRITTMRKVSEHESPC--WYDDQVS 178
           PNGQKSDWIMHEYRLETDENGTPQEEGWVVCRVFKKR+  +R++ +++S    WYDDQ+S
Sbjct: 121 PNGQKSDWIMHEYRLETDENGTPQEEGWVVCRVFKKRLAAVRRMGDYDSSPSHWYDDQLS 180

Query: 179 FM-QDLDSPK-----PN---SQHSNLAYHIPYG--------------CKKELDHHLQYQV 215
           FM  +L++       PN    Q      H+PYG              CK+EL+ H  + V
Sbjct: 181 FMASELETNGQRRILPNHHQQQQHEHQQHMPYGLNASAYALNNPNLQCKQELELHYNHLV 240

Query: 216 PHEH--------FLQLPLLESPKLMQTASNVNGNPMTAYGLDMN--HASTLQQSSSLTHE 265
              H        FLQLP LESPK+ Q  SN N  P     +D N  H + LQQ S++ HE
Sbjct: 241 QRNHLLDESHLSFLQLPQLESPKIQQDNSNCNSLPYGTSNIDNNSSHNANLQQ-SNIAHE 299

Query: 266 EHMQQNLQFFGR---DQNYEQAVDQVTDWRVLDKFVASQLSQEDSIAANNNVFRGNEQTN 322
           E + Q  Q F     +   EQ +DQVTDWRVLDKFVASQLS E++  A+ ++    + T+
Sbjct: 300 EQLNQGNQNFSSLYMNSGNEQVMDQVTDWRVLDKFVASQLSNEEAATASASIQNNAKDTS 359

Query: 323 NVLVRQLMNK-----QEMAPENASTSTSSCQIDLWK 353
           N   +    K      +M  E  ++++SSCQIDLWK
Sbjct: 360 NAEYQVDEEKDPKRASDMGEEYTASTSSSCQIDLWK 395

Transcription factor probably involved in xylem formation.
Arabidopsis thaliana (taxid: 3702)

>sp|Q84WP6|NAC43_ARATH NAC domain-containing protein 43 OS=Arabidopsis thaliana GN=NAC043 PE=2 SV=2

 Score =  264 bits (675), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 161/343 (46%), Positives = 197/343 (57%), Gaps = 68/343 (19%)

Query: 1   MNAFSHVPPGFRFHPTDEELVDYYLRKKITSRRIDLDVIKDVDLYKIEPWDLQELCRIGT 60
           +N  S VPPGFRFHPT+EEL+ YYLRKK+ S  IDLDVI+DVDL K+EPWD+QE+C+IGT
Sbjct: 10  VNGQSQVPPGFRFHPTEEELLQYYLRKKVNSIEIDLDVIRDVDLNKLEPWDIQEMCKIGT 69

Query: 61  EEQNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIYSKHDLIGMRKTLVFYKGRA 120
             QN+WYFFSHKDKKYPTGTRTNRAT AGFWKATGRDK IYS    IGMRKTLVFYKGRA
Sbjct: 70  TPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKIIYSNGRRIGMRKTLVFYKGRA 129

Query: 121 PNGQKSDWIMHEYRLE----TDENGT-----------PQEEGWVVCRVFKKRITTMRKVS 165
           P+GQKSDWIMHEYRL+    + E+ T            Q+EGWVVCR+FKK+   + K  
Sbjct: 130 PHGQKSDWIMHEYRLDDNIISPEDVTVHEVVSIIGEASQDEGWVVCRIFKKK--NLHKTL 187

Query: 166 EHESPCWYDDQVSFMQDLDSPKPNSQH-------SNLAYHIPYGCKKELDHHLQYQVPHE 218
              SP       S     D+PK  S               +   CK+EL+         +
Sbjct: 188 --NSPV---GGASLSGGGDTPKTTSSQIFNEDTLDQFLELMGRSCKEELN--------LD 234

Query: 219 HFLQLPLLESPKLMQTASNVNGNPMTAYGLDMNHASTLQQSSSLTHEEHMQQNLQFFGRD 278
            F++LP LESP               +  ++  H S    S    H  H+   +     D
Sbjct: 235 PFMKLPNLESPN--------------SQAINNCHVS----SPDTNHNIHVSNVV-----D 271

Query: 279 QNYEQAVDQVTDWRVLDKFVASQLSQED--SIAANNNVFRGNE 319
            ++      VT W  LD+ VASQL+     SI A N    G++
Sbjct: 272 TSF------VTSWAALDRLVASQLNGPTSYSITAVNESHVGHD 308

Transcription activator of genes involved in biosynthesis of secondary walls. Together with NST2 and NST3, required for the secondary cell wall thickening of sclerenchymatous fibers, secondary xylem (tracheary elements), and of the anther endocethium, which is necessary for anther dehiscence. May also regulates the secondary cell wall lignification of other tissues.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9M274|NAC66_ARATH NAC domain-containing protein 66 OS=Arabidopsis thaliana GN=NAC066 PE=2 SV=1

 Score =  254 bits (648), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 119/173 (68%), Positives = 137/173 (79%), Gaps = 19/173 (10%)

Query: 1   MNAFSHVPPGFRFHPTDEELVDYYLRKKITSRRIDLDVIKDVDLYKIEPWDLQELCRIGT 60
           +N  S VPPGFRFHPT+EEL+ YYLRKKI++ +IDLDVI D+DL K+EPWD+QE+C+IGT
Sbjct: 5   VNGQSQVPPGFRFHPTEEELLKYYLRKKISNIKIDLDVIPDIDLNKLEPWDIQEMCKIGT 64

Query: 61  EEQNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIYSKHDLIGMRKTLVFYKGRA 120
             QN+WYF+SHKDKKYPTGTRTNRATT GFWKATGRDK IY+  D IGMRKTLVFYKGRA
Sbjct: 65  TPQNDWYFYSHKDKKYPTGTRTNRATTVGFWKATGRDKTIYTNGDRIGMRKTLVFYKGRA 124

Query: 121 PNGQKSDWIMHEYRLE-----------------TDENGTPQEEGWVVCRVFKK 156
           P+GQKSDWIMHEYRL+                  D  G+  +EGWVVCRVFKK
Sbjct: 125 PHGQKSDWIMHEYRLDESVLISSCGDHDVNVETCDVIGS--DEGWVVCRVFKK 175

Transcription activator of genes involved in biosynthesis of secondary walls. Together with NST1, required for the secondary cell wall thickening of the anther endocethium, which is necessary for anther dehiscence. May also regulates the secondary cell wall lignification of other tissues such as tracheary elements.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LPI7|NAC12_ARATH NAC domain-containing protein 12 OS=Arabidopsis thaliana GN=NAC012 PE=2 SV=1

 Score =  249 bits (637), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 155/353 (43%), Positives = 205/353 (58%), Gaps = 61/353 (17%)

Query: 1   MNAFSHVPPGFRFHPTDEELVDYYLRKKITSRRIDLDVIKDVDLYKIEPWDLQELCRIGT 60
           +N  S VPPGFRFHPT+EEL+ YYLRKK+ S++IDLDVI++VDL K+EPWD+QE CRIG+
Sbjct: 10  INGQSKVPPGFRFHPTEEELLHYYLRKKVNSQKIDLDVIREVDLNKLEPWDIQEECRIGS 69

Query: 61  EEQNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIYSKHDLIGMRKTLVFYKGRA 120
             QN+WYFFSHKDKKYPTGTRTNRAT AGFWKATGRDK I S    IG+RKTLVFYKGRA
Sbjct: 70  TPQNDWYFFSHKDKKYPTGTRTNRATVAGFWKATGRDKIICSCVRRIGLRKTLVFYKGRA 129

Query: 121 PNGQKSDWIMHEYRLE------------TDENGTPQEEGWVVCRVFKK----RITTMRKV 164
           P+GQKSDWIMHEYRL+            T++  +  EEGWVVCRVF+K    +I    K+
Sbjct: 130 PHGQKSDWIMHEYRLDDTPMSNGYADVVTEDPMSYNEEGWVVCRVFRKKNYQKIDDCPKI 189

Query: 165 S---------EHESPCWYDDQVSFMQDLDSPKPNSQHSNLAYHIPYGCKKELDHHLQYQV 215
           +         E + P +++ Q     D      +   SN+       C  E     Q+Q 
Sbjct: 190 TLSSLPDDTEEEKGPTFHNTQNVTGLDHVLLYMDRTGSNI-------CMPESQTTTQHQ- 241

Query: 216 PHEHFLQLPLLESPKLMQTASNVNGNPMTAYGLDMNHASTLQQSSSLTHEEHMQQNLQFF 275
               F+QLP LE+PK   + S V+ + +T   LD    S +Q+  +              
Sbjct: 242 DDVLFMQLPSLETPK---SESPVDQSFLTPSKLDF---SPVQEKIT-------------- 281

Query: 276 GRDQNYEQAVDQVTDWRVLDKFVASQLSQEDSIAANNNVFRGNEQTNNVLVRQ 328
                 E+ V   ++W  LD+ VA QL+       +   F   E+  + ++++
Sbjct: 282 ------ERPV--CSNWASLDRLVAWQLNNGHHNPCHRKSFDEEEENGDTMMQR 326

Transcription activator of genes involved in biosynthesis of secondary walls. Together with NST1, required for the secondary cell wall thickening and lignification of sclerenchymatous fibers and secondary xylem vessels (tracheary elements). Seems to repress the secondary cell wall thickening of xylary fibers. May also regulates the secondary cell wall lignification of other tissues. Binds to and activates the promoter of MYB46.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SV87|BRN2_ARATH Protein BEARSKIN1 OS=Arabidopsis thaliana GN=BRN2 PE=2 SV=1

 Score =  248 bits (634), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 110/153 (71%), Positives = 131/153 (85%), Gaps = 2/153 (1%)

Query: 7   VPPGFRFHPTDEELVDYYLRKKITSRRIDLDVIKDVDLYKIEPWDLQELCRIGTEEQNEW 66
           VPPGFRFHPTDEEL+ YYL+KKI+ ++ +++VI++VDL K+EPWDLQE C+IG+  QNEW
Sbjct: 9   VPPGFRFHPTDEELLHYYLKKKISYQKFEMEVIREVDLNKLEPWDLQERCKIGSTPQNEW 68

Query: 67  YFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIYSKHDLIGMRKTLVFYKGRAPNGQKS 126
           YFFSHKD+KYPTG+RTNRAT AGFWKATGRDK I + +  IGMRKTLVFYKGRAP+GQK+
Sbjct: 69  YFFSHKDRKYPTGSRTNRATHAGFWKATGRDKCIRNSYKKIGMRKTLVFYKGRAPHGQKT 128

Query: 127 DWIMHEYRLE--TDENGTPQEEGWVVCRVFKKR 157
           DWIMHEYRLE   D    P E+GWVVCRVF K+
Sbjct: 129 DWIMHEYRLEDADDPQANPSEDGWVVCRVFMKK 161

Transcription activator. Together with BRN1 and SMB, regulates cellular maturation of root cap. Promotes the expression of genes involved in secondary cell walls (SCW) biosynthesis.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9C878|BRN1_ARATH Protein BEARSKIN1 OS=Arabidopsis thaliana GN=BRN1 PE=2 SV=1

 Score =  246 bits (628), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 110/151 (72%), Positives = 132/151 (87%), Gaps = 1/151 (0%)

Query: 7   VPPGFRFHPTDEELVDYYLRKKITSRRIDLDVIKDVDLYKIEPWDLQELCRIGTEEQNEW 66
           VPPGFRFHPTDEEL+ YYL+KKI+  + +++VIK+VDL KIEPWDLQ+ C+IG+  QNEW
Sbjct: 8   VPPGFRFHPTDEELLHYYLKKKISYEKFEMEVIKEVDLNKIEPWDLQDRCKIGSTPQNEW 67

Query: 67  YFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIYSKHDLIGMRKTLVFYKGRAPNGQKS 126
           YFFSHKD+KYPTG+RTNRAT +GFWKATGRDK I + +  IGMRKTLVFYKGRAP+GQK+
Sbjct: 68  YFFSHKDRKYPTGSRTNRATHSGFWKATGRDKCIRNSYKKIGMRKTLVFYKGRAPHGQKT 127

Query: 127 DWIMHEYRLETDENGTPQEEGWVVCRVFKKR 157
           DWIMHEYR+E  E+  P E+GWVVCRVFKK+
Sbjct: 128 DWIMHEYRIEDTED-DPCEDGWVVCRVFKKK 157

Transcription activator. Together with SMB and BRN2, regulates cellular maturation of root cap. Promotes the expression of genes involved in secondary cell walls (SCW) biosynthesis.

Arabidopsis thaliana (taxid: 3702)

>sp|Q5Z6B6|NAC76_ORYSJ NAC domain-containing protein 76 OS=Oryza sativa subsp. japonica GN=NAC76 PE=2 SV=2

 Score =  245 bits (626), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 115/152 (75%), Positives = 131/152 (86%), Gaps = 2/152 (1%)

Query: 7   VPPGFRFHPTDEELVDYYLRKKITSRRIDLDVIKDVDLYKIEPWDLQELCRIGTEEQNEW 66
           VPPGFRFHPTDEEL+ YYLRKK+    IDLDVI+++DL K+EPWDL++ CRIGT  QNEW
Sbjct: 10  VPPGFRFHPTDEELLYYYLRKKVAYEAIDLDVIREIDLNKLEPWDLKDRCRIGTGPQNEW 69

Query: 67  YFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIYSKHDL-IGMRKTLVFYKGRAPNGQK 125
           YFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAI+  +   IGMRKTLVFY GRAP+G+K
Sbjct: 70  YFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIFLANACRIGMRKTLVFYVGRAPHGKK 129

Query: 126 SDWIMHEYRLETDENGTPQEEGWVVCRVFKKR 157
           +DWIMHEYRL+ D N   QE+GWVVCRVF K+
Sbjct: 130 TDWIMHEYRLDQD-NVDVQEDGWVVCRVFMKK 160

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9MA17|SMB_ARATH Protein SOMBRERO OS=Arabidopsis thaliana GN=SMB PE=1 SV=1

 Score =  241 bits (615), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 111/152 (73%), Positives = 132/152 (86%), Gaps = 2/152 (1%)

Query: 7   VPPGFRFHPTDEELVDYYLRKKITSRRIDLDVIKDVDLYKIEPWDLQELCRIGTEEQNEW 66
           VPPGFRFHPT+EEL+ YYL+KK++   IDLDVI++VDL K+EPW+L+E CRIG+  QNEW
Sbjct: 17  VPPGFRFHPTEEELLYYYLKKKVSYEPIDLDVIREVDLNKLEPWELKEKCRIGSGPQNEW 76

Query: 67  YFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIY-SKHDLIGMRKTLVFYKGRAPNGQK 125
           YFFSHKDKKYPTGTRTNRAT AGFWKATGRDK+I+ +    IG+RKTLVFY GRAP+GQK
Sbjct: 77  YFFSHKDKKYPTGTRTNRATAAGFWKATGRDKSIHLNSSKKIGLRKTLVFYTGRAPHGQK 136

Query: 126 SDWIMHEYRLETDENGTPQEEGWVVCRVFKKR 157
           ++WIMHEYRL+  EN   QE+GWVVCRVFKK+
Sbjct: 137 TEWIMHEYRLDDSENEI-QEDGWVVCRVFKKK 167

Transcription regulator. Together with BRN1 and BRN2, regulates cellular maturation of root cap. Represses stem cell-like divisions in the root cap daughter cells, and thus promotes daughter cell fate. Inhibits expression of its positive regulator FEZ in a feedback loop for controlled switches in cell division plane. Promotes the expression of genes involved in secondary cell walls (SCW) biosynthesis.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FLJ2|NC100_ARATH NAC domain-containing protein 100 OS=Arabidopsis thaliana GN=NAC100 PE=2 SV=1

 Score =  191 bits (486), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 88/155 (56%), Positives = 112/155 (72%), Gaps = 9/155 (5%)

Query: 7   VPPGFRFHPTDEELVDYYLRKKITSRRIDLDVIKDVDLYKIEPWDLQELCRIGTEEQNEW 66
           +PPGFRFHPTDEEL+ +YL KK+         I +VDL K EPW+L  + ++G   + EW
Sbjct: 16  LPPGFRFHPTDEELITHYLHKKVLDTSFSAKAIGEVDLNKSEPWELPWMAKMG---EKEW 72

Query: 67  YFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIYSKHDLIGMRKTLVFYKGRAPNGQKS 126
           YFF  +D+KYPTG RTNRAT AG+WKATG+DK IY    L+GM+KTLVFY+GRAP GQK+
Sbjct: 73  YFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIYRGKSLVGMKKTLVFYRGRAPKGQKT 132

Query: 127 DWIMHEYRLETDENG-----TPQEEGWVVCRVFKK 156
           +W+MHEYRLE   +      T + E WV+CRVF+K
Sbjct: 133 NWVMHEYRLEGKFSAHNLPKTAKNE-WVICRVFQK 166

Arabidopsis thaliana (taxid: 3702)

>sp|O49255|NAC29_ARATH NAC transcription factor 29 OS=Arabidopsis thaliana GN=NAC029 PE=2 SV=1

 Score =  190 bits (482), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 86/159 (54%), Positives = 112/159 (70%), Gaps = 9/159 (5%)

Query: 5   SHVPPGFRFHPTDEELVDYYLRKKITSRRIDLDVIKDVDLYKIEPWDLQELCRIGTEEQN 64
           S +PPGFRFHPTDEEL+ YYLR +  S+   + +I +VD+YK +PW L E    G   +N
Sbjct: 7   STLPPGFRFHPTDEELIVYYLRNQTMSKPCPVSIIPEVDIYKFDPWQLPEKTEFG---EN 63

Query: 65  EWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIYSKHDLIGMRKTLVFYKGRAPNGQ 124
           EWYFFS +++KYP G R NRA  +G+WKATG DKAI+S    +G++K LVFYKGR P G 
Sbjct: 64  EWYFFSPRERKYPNGVRPNRAAVSGYWKATGTDKAIHSGSSNVGVKKALVFYKGRPPKGI 123

Query: 125 KSDWIMHEYRL------ETDENGTPQEEGWVVCRVFKKR 157
           K+DWIMHEYRL       T  NG+ + + WV+CR++KKR
Sbjct: 124 KTDWIMHEYRLHDSRKASTKRNGSMRLDEWVLCRIYKKR 162

May function in the transition between active cell division and cell expansion.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	353
359490199	359	PREDICTED: NAC domain-containing protein	0.983	0.966	0.775	1e-161
327397092	362	transcription factor [Populus trichocarp	0.988	0.964	0.754	1e-158
312618430	362	wood-associated NAC domain transcription	0.988	0.964	0.748	1e-156
255539755	389	NAC domain-containing protein, putative	0.985	0.894	0.758	1e-156
327397090	363	transcription factor [Populus trichocarp	0.988	0.961	0.749	1e-155
224120270	370	NAC domain protein, IPR003441 [Populus t	0.988	0.943	0.737	1e-155
224136718	363	NAC domain protein, IPR003441 [Populus t	0.988	0.961	0.743	1e-154
296084195	345	unnamed protein product [Vitis vinifera]	0.943	0.965	0.745	1e-151
356544265	358	PREDICTED: NAC domain-containing protein	0.971	0.958	0.764	1e-151
356529883	365	PREDICTED: NAC domain-containing protein	0.983	0.950	0.747	1e-147

>gi|359490199|ref|XP_002264986.2| PREDICTED: NAC domain-containing protein 7-like [Vitis vinifera]

 Score =  572 bits (1475), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 283/365 (77%), Positives = 308/365 (84%), Gaps = 18/365 (4%)

Query: 1   MNAFSHVPPGFRFHPTDEELVDYYLRKKITSRRIDLDVIKDVDLYKIEPWDLQELCRIGT 60
           MN F+HVPPGFRFHPTDEELVDYYLRKK+TSRRIDLDVIKDVDLYKIEPWDLQELCRIGT
Sbjct: 1   MNTFAHVPPGFRFHPTDEELVDYYLRKKVTSRRIDLDVIKDVDLYKIEPWDLQELCRIGT 60

Query: 61  EEQNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIYSKHDLIGMRKTLVFYKGRA 120
           +EQNEWYFFSHKDKKYPTGTRTNRAT AGFWKATGRDKAIYSKHDLIGMRKTLVFYKGRA
Sbjct: 61  DEQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAIYSKHDLIGMRKTLVFYKGRA 120

Query: 121 PNGQKSDWIMHEYRLETDENGTPQEEGWVVCRVFKKRITTMRKVSEHESPCWYDDQVSFM 180
           PNGQKSDWIMHEYRLETDENGTPQEEGWVVCRVFKKRI T+RK+SEHESPCWYDDQVSFM
Sbjct: 121 PNGQKSDWIMHEYRLETDENGTPQEEGWVVCRVFKKRIATVRKMSEHESPCWYDDQVSFM 180

Query: 181 QDLDSPKPNSQHSNLAYHIPYGCKKELDHHLQYQVPHEHFLQLPLLESPKLMQTAS-NVN 239
            +L+SPK NS HSN+AYH+PY CKKE+D  LQYQ+PHE FLQLPLLESPKL+QTA+  V+
Sbjct: 181 PELESPKQNS-HSNMAYHLPYSCKKEID--LQYQIPHEQFLQLPLLESPKLLQTAATTVS 237

Query: 240 GNPMTAYGLDMNHASTLQQSSSLTHEEHM-----QQNLQFFGRDQNYEQAVDQVTDWRVL 294
            N M AYG+D+NH +TL QS SLT +EH+     +QNL       N E AVDQVTDWRVL
Sbjct: 238 CNSMVAYGIDINHGTTL-QSPSLTQDEHIRQQAHEQNLHPIYVYNNNELAVDQVTDWRVL 296

Query: 295 DKFVASQLSQEDSIAANN------NVFRGNEQTNNVLVRQLMNKQEMAPENASTSTSSCQ 348
            KFVASQLS ED    NN       +F   E  N  L+ Q +NK+E  PENASTSTSSCQ
Sbjct: 297 HKFVASQLSHEDVSKENNYSSNAATLFHAAEHPN--LLVQHLNKEEAVPENASTSTSSCQ 354

Query: 349 IDLWK 353
           I+LWK
Sbjct: 355 IELWK 359

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|327397092|dbj|BAK14363.1| transcription factor [Populus trichocarpa]

 Score =  563 bits (1450), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 276/366 (75%), Positives = 305/366 (83%), Gaps = 17/366 (4%)

Query: 1   MNAFSHVPPGFRFHPTDEELVDYYLRKKITSRRIDLDVIKDVDLYKIEPWDLQELCRIGT 60
           MN F+HVPPGFRFHPTDEELVDYYLRKK+ SRRID+DVIKDVDLYKIEPWDLQELCRIGT
Sbjct: 1   MNTFTHVPPGFRFHPTDEELVDYYLRKKVNSRRIDVDVIKDVDLYKIEPWDLQELCRIGT 60

Query: 61  EEQNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIYSKHDLIGMRKTLVFYKGRA 120
           EEQNEWYFFSHKDKKYPTGTRTNRAT AGFWKATGRDKAIYSK DLIGMRKTLVFYKGRA
Sbjct: 61  EEQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAIYSKQDLIGMRKTLVFYKGRA 120

Query: 121 PNGQKSDWIMHEYRLETDENGTPQEEGWVVCRVFKKRITTMRKVSEHESPCWYDDQVSFM 180
           PNGQKSDWIMHEYRLETDENGTPQEEGWVVCRVFKKR+ TMRKVSEHES CWYDDQV+FM
Sbjct: 121 PNGQKSDWIMHEYRLETDENGTPQEEGWVVCRVFKKRLPTMRKVSEHESVCWYDDQVAFM 180

Query: 181 QDLDSPKPNSQHSNLAYHIPYGCKKELDHHLQYQVPHEHFLQLPLLESPKLMQTASNVNG 240
            DLDSPK NSQ  +L Y  PY CKKE+D  LQYQ+PH+HFLQLPLL+SPKL+Q+A  ++ 
Sbjct: 181 HDLDSPKQNSQ-PDLGYQFPYPCKKEID--LQYQIPHDHFLQLPLLQSPKLLQSAPTISC 237

Query: 241 NPM-TAYGLDMNHASTLQQSSSLTHEEHMQQNLQ-----FFGRDQNYEQAVDQVTDWRVL 294
           N +  AYGLD+N AST+ QSS+LT E+H+QQ  +      +G +   EQAVDQVTDWRVL
Sbjct: 238 NSINAAYGLDINQASTI-QSSTLTQEDHIQQAHEQSFPSIYGSNNINEQAVDQVTDWRVL 296

Query: 295 DKFVASQLSQEDSIA------ANNNVFRGNE-QTNNVLVRQLMNKQEMAPENASTSTSSC 347
           DKFVASQLSQED +       A+NN+F  +     N+  R L  +    PENASTSTSSC
Sbjct: 297 DKFVASQLSQEDVVKENNHPNASNNIFNTSSIHAPNIFARHLSKQDTSVPENASTSTSSC 356

Query: 348 QIDLWK 353
           QIDLWK
Sbjct: 357 QIDLWK 362

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|312618430|gb|ADR00335.1| wood-associated NAC domain transcription factor 3B [Populus trichocarpa]

 Score =  558 bits (1438), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 274/366 (74%), Positives = 303/366 (82%), Gaps = 17/366 (4%)

Query: 1   MNAFSHVPPGFRFHPTDEELVDYYLRKKITSRRIDLDVIKDVDLYKIEPWDLQELCRIGT 60
           MN F+HVPPGFRFHPTDEELVDYYLRKK+ SRRID+DVIKDVDLYKIEPWDLQELCRIGT
Sbjct: 1   MNTFTHVPPGFRFHPTDEELVDYYLRKKVNSRRIDVDVIKDVDLYKIEPWDLQELCRIGT 60

Query: 61  EEQNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIYSKHDLIGMRKTLVFYKGRA 120
           EEQNEWYFFSHKDKKYPTGTRTNRAT AGFWKATGRDKAIYSK DLIGMRKTLVFYKGRA
Sbjct: 61  EEQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAIYSKQDLIGMRKTLVFYKGRA 120

Query: 121 PNGQKSDWIMHEYRLETDENGTPQEEGWVVCRVFKKRITTMRKVSEHESPCWYDDQVSFM 180
           PNGQKSDWIMHEYRLETDENGTPQ +GWVVCRVFKKR+ TMRKVSEHES CWYDDQV+FM
Sbjct: 121 PNGQKSDWIMHEYRLETDENGTPQAKGWVVCRVFKKRLPTMRKVSEHESVCWYDDQVAFM 180

Query: 181 QDLDSPKPNSQHSNLAYHIPYGCKKELDHHLQYQVPHEHFLQLPLLESPKLMQTASNVNG 240
            DLDSPK NSQ  +L Y  PY CKKE+D  LQYQ+PH+HFLQLPLL+SPKL+Q A  ++ 
Sbjct: 181 HDLDSPKQNSQ-PDLGYQFPYPCKKEID--LQYQIPHDHFLQLPLLQSPKLLQPAPTISC 237

Query: 241 NPM-TAYGLDMNHASTLQQSSSLTHEEHMQQNLQ-----FFGRDQNYEQAVDQVTDWRVL 294
           N +  AYGLD+N AST+ QSS+LT E+H+QQ  +      +G +   EQAVDQVTDWRVL
Sbjct: 238 NSINAAYGLDINQASTI-QSSTLTQEDHIQQAHEQSFPSIYGSNNINEQAVDQVTDWRVL 296

Query: 295 DKFVASQLSQEDSIA------ANNNVFRGNE-QTNNVLVRQLMNKQEMAPENASTSTSSC 347
           DKFVASQLSQED +       A+NN+F  +     N+  R L  +    PENASTSTSSC
Sbjct: 297 DKFVASQLSQEDVVKENNHPNASNNIFNTSSIHAPNIFARHLSKQDTSVPENASTSTSSC 356

Query: 348 QIDLWK 353
           QIDLWK
Sbjct: 357 QIDLWK 362

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255539755|ref|XP_002510942.1| NAC domain-containing protein, putative [Ricinus communis] gi|223550057|gb|EEF51544.1| NAC domain-containing protein, putative [Ricinus communis]

 Score =  556 bits (1433), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 280/369 (75%), Positives = 304/369 (82%), Gaps = 21/369 (5%)

Query: 1   MNAFSHVPPGFRFHPTDEELVDYYLRKKITSRRIDLDVIKDVDLYKIEPWDLQELCRIGT 60
           MN+FSHVPPGFRFHPTDEELVDYYLRKK+ SRR+DLDVIKDVDLYKIEPWDLQELCRIGT
Sbjct: 26  MNSFSHVPPGFRFHPTDEELVDYYLRKKVNSRRVDLDVIKDVDLYKIEPWDLQELCRIGT 85

Query: 61  EEQNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIYSKHDLIGMRKTLVFYKGRA 120
           ++QNEWYFFSHKDKKYPTGTRTNRAT AGFWKATGRDKAIYSKHDLIGMRKTLVFYKGRA
Sbjct: 86  DDQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAIYSKHDLIGMRKTLVFYKGRA 145

Query: 121 PNGQKSDWIMHEYRLETDENGTPQEEGWVVCRVFKKRITTMRKVSEHESPCWYDDQVSFM 180
           PNGQKSDWIMHEYRLETDENGTPQEEGWVVCRVFKKRITTMRKV+EHES  WYDDQVSFM
Sbjct: 146 PNGQKSDWIMHEYRLETDENGTPQEEGWVVCRVFKKRITTMRKVNEHESSSWYDDQVSFM 205

Query: 181 QDLDSPKPNSQHSNLAYHIPYGCKKELDHHLQYQVPHEHFLQLPLLESPKLMQTASNVNG 240
           Q+ DSPK NS H +LAYH+ Y CKKEL    QYQVPH+HFLQLPLL+SPKL+Q A+NV+ 
Sbjct: 206 QEEDSPKQNS-HPDLAYHVSYTCKKELG--FQYQVPHDHFLQLPLLQSPKLLQVAANVSC 262

Query: 241 NPMTAYGLDMNHASTLQQSSSLTHEEHMQQNLQ-----FFGRDQNY----EQAVDQVTDW 291
               AYGLDMN  +   QSSS+  E H+ Q  +      F  +Q+     EQAVDQVTDW
Sbjct: 263 TSTAAYGLDMNQQARTPQSSSVAQEGHLHQRREQSLHSLFANNQSNNNNTEQAVDQVTDW 322

Query: 292 RVLDKFVASQLSQED-------SIAANNNVFRGNEQTNNVLVRQLMNKQEMAPENASTST 344
           RVLDKFVASQLSQED          A NN+F  ++Q N  L +Q  NKQE AP NASTST
Sbjct: 323 RVLDKFVASQLSQEDVNKENNNYSNAANNIFHASDQANQ-LAKQ-SNKQEAAPGNASTST 380

Query: 345 SSCQIDLWK 353
           SSCQIDLWK
Sbjct: 381 SSCQIDLWK 389

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|327397090|dbj|BAK14362.1| transcription factor [Populus trichocarpa]

 Score =  555 bits (1430), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 275/367 (74%), Positives = 303/367 (82%), Gaps = 18/367 (4%)

Query: 1   MNAFSHVPPGFRFHPTDEELVDYYLRKKITSRRIDLDVIKDVDLYKIEPWDLQELCRIGT 60
           MN+F+HVPPGFRFHPTDEELV YYLRKK+ SRRIDLDVIKDV+LYKIEPWDLQELCRIGT
Sbjct: 1   MNSFTHVPPGFRFHPTDEELVHYYLRKKVNSRRIDLDVIKDVELYKIEPWDLQELCRIGT 60

Query: 61  EEQNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIYSKHDLIGMRKTLVFYKGRA 120
           EEQNEWYFFSHKDKKYPTGTRTNRAT AGFWKATGRDKAIYSKHDLIGMRKTLVFYKGRA
Sbjct: 61  EEQNEWYFFSHKDKKYPTGTRTNRATVAGFWKATGRDKAIYSKHDLIGMRKTLVFYKGRA 120

Query: 121 PNGQKSDWIMHEYRLETDENGTPQEEGWVVCRVFKKRITTMRKVSEHESPCWYDDQVSFM 180
           PNGQKSDWIMHEYRLETDENGTPQEEGWVVCRVFKKRI TM KVSEHES CWYDDQV+FM
Sbjct: 121 PNGQKSDWIMHEYRLETDENGTPQEEGWVVCRVFKKRIPTMPKVSEHESVCWYDDQVAFM 180

Query: 181 QDLDSPKPNSQHSNLAYHIPYGCKKELDHHLQYQVPHEHFLQLPLLESPKLMQTASNVNG 240
            DLDSPK N Q  +L Y  PY CKKELD   QYQ+PH+HFLQLPLL+SPKL+Q+A  ++ 
Sbjct: 181 HDLDSPKQNFQ-PDLGYQFPYSCKKELD--FQYQIPHDHFLQLPLLQSPKLLQSAPTLSC 237

Query: 241 NPM-TAYGLDMNHASTLQQSSSLTHEEHMQQNLQ------FFGRDQNYEQAVDQVTDWRV 293
           N +  AYGLD+N  ST  QSS+LT E+H+QQ  +      +   + N+EQAVDQVTDWRV
Sbjct: 238 NSINAAYGLDINQTSTF-QSSTLTQEDHVQQTHEQRFPTIYGNNNSNHEQAVDQVTDWRV 296

Query: 294 LDKFVASQLSQEDSIA------ANNNVFRGNE-QTNNVLVRQLMNKQEMAPENASTSTSS 346
           LDKFVASQLS ED I       A+NN+F  +     N+LVR L  ++    ENASTSTSS
Sbjct: 297 LDKFVASQLSHEDVIKETNHPNASNNIFNTSSVHAANILVRHLNKQEASVQENASTSTSS 356

Query: 347 CQIDLWK 353
           CQIDLWK
Sbjct: 357 CQIDLWK 363

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224120270|ref|XP_002318288.1| NAC domain protein, IPR003441 [Populus trichocarpa] gi|222858961|gb|EEE96508.1| NAC domain protein, IPR003441 [Populus trichocarpa]

 Score =  555 bits (1429), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 276/374 (73%), Positives = 304/374 (81%), Gaps = 25/374 (6%)

Query: 1   MNAFSHVPPGFRFHPTDEELVDYYLRKKITSRRIDLDVIKDVDLYKIEPWDLQELCRIGT 60
           MN F+HVPPGFRFHPTDEELVDYYLRKK+ SRRID+DVIKDVDLYKIEPWDLQELCRIGT
Sbjct: 1   MNTFTHVPPGFRFHPTDEELVDYYLRKKVNSRRIDVDVIKDVDLYKIEPWDLQELCRIGT 60

Query: 61  EEQNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIYSKHDLIGMRKTLVFYKGRA 120
           EEQNEWYFFSHKDKKYPTGTRTNRAT AGFWKATGRDKAIYSK DLIGMRKTLVFYKGRA
Sbjct: 61  EEQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAIYSKQDLIGMRKTLVFYKGRA 120

Query: 121 PNGQKSDWIMHEYRLETDENGTPQ--------EEGWVVCRVFKKRITTMRKVSEHESPCW 172
           PNGQKSDWIMHEYRLETDENGTPQ        EEGWVVCRVFKKR+ TMRKVSEHES CW
Sbjct: 121 PNGQKSDWIMHEYRLETDENGTPQASIGRRFYEEGWVVCRVFKKRLPTMRKVSEHESVCW 180

Query: 173 YDDQVSFMQDLDSPKPNSQHSNLAYHIPYGCKKELDHHLQYQVPHEHFLQLPLLESPKLM 232
           YDDQV+FM DLDSPK NSQ  +L Y  PY CKKE+D  LQYQ+PH+HFLQLPLL+SPKL+
Sbjct: 181 YDDQVAFMHDLDSPKQNSQ-PDLGYQFPYPCKKEID--LQYQIPHDHFLQLPLLQSPKLL 237

Query: 233 QTASNVNGNPM-TAYGLDMNHASTLQQSSSLTHEEHMQQNLQ-----FFGRDQNYEQAVD 286
           Q A  ++ N +  AYGLD+N AST+ QSS+LT E+H+QQ  +      +G +   EQAVD
Sbjct: 238 QPAPTISCNSINAAYGLDINQASTI-QSSTLTQEDHIQQAHEQSFPSIYGSNNINEQAVD 296

Query: 287 QVTDWRVLDKFVASQLSQEDSIA------ANNNVFRGNE-QTNNVLVRQLMNKQEMAPEN 339
           QVTDWRVLDKFVASQLSQED +       A+NN+F  +     N+  R L  +    PEN
Sbjct: 297 QVTDWRVLDKFVASQLSQEDVVKENNHPNASNNIFNTSSIHAPNIFARHLSKQDTSVPEN 356

Query: 340 ASTSTSSCQIDLWK 353
           ASTSTSSCQIDLWK
Sbjct: 357 ASTSTSSCQIDLWK 370

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224136718|ref|XP_002322398.1| NAC domain protein, IPR003441 [Populus trichocarpa] gi|222869394|gb|EEF06525.1| NAC domain protein, IPR003441 [Populus trichocarpa] gi|312618428|gb|ADR00334.1| wood-associated NAC domain transcription factor 3A [Populus trichocarpa]

 Score =  552 bits (1422), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 273/367 (74%), Positives = 302/367 (82%), Gaps = 18/367 (4%)

Query: 1   MNAFSHVPPGFRFHPTDEELVDYYLRKKITSRRIDLDVIKDVDLYKIEPWDLQELCRIGT 60
           MN+F+HVPPGFRFHPTDEELV YYLRKK+ SRRIDLDVIKDV+LYKIEPWDLQELCRIGT
Sbjct: 1   MNSFTHVPPGFRFHPTDEELVHYYLRKKVNSRRIDLDVIKDVELYKIEPWDLQELCRIGT 60

Query: 61  EEQNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIYSKHDLIGMRKTLVFYKGRA 120
           EEQNEWYFFSHKDKKYPTGTRTNRAT AGFWKATGRDKAIYSKHDLIGMRKTLVFYKGRA
Sbjct: 61  EEQNEWYFFSHKDKKYPTGTRTNRATVAGFWKATGRDKAIYSKHDLIGMRKTLVFYKGRA 120

Query: 121 PNGQKSDWIMHEYRLETDENGTPQEEGWVVCRVFKKRITTMRKVSEHESPCWYDDQVSFM 180
           PNGQKSDWIMHEYRLETDENGTPQ +GWVVCRVFKKRI TM KVSEHES CWYDDQV+FM
Sbjct: 121 PNGQKSDWIMHEYRLETDENGTPQAKGWVVCRVFKKRIPTMPKVSEHESVCWYDDQVAFM 180

Query: 181 QDLDSPKPNSQHSNLAYHIPYGCKKELDHHLQYQVPHEHFLQLPLLESPKLMQTASNVNG 240
            DLDSPK N Q  +L Y  PY CKKELD   QYQ+PH+HFLQLPLL+SPKL+Q+A  ++ 
Sbjct: 181 HDLDSPKQNFQ-PDLGYQFPYSCKKELD--FQYQIPHDHFLQLPLLQSPKLLQSAPTLSC 237

Query: 241 NPM-TAYGLDMNHASTLQQSSSLTHEEHMQQNLQ------FFGRDQNYEQAVDQVTDWRV 293
           N +  AYGLD+N  ST  QSS+LT E+H+QQ  +      +   + N+EQAVDQVTDWRV
Sbjct: 238 NSINAAYGLDINQTSTF-QSSTLTQEDHVQQTHEQRFPTIYGNNNSNHEQAVDQVTDWRV 296

Query: 294 LDKFVASQLSQEDSIA------ANNNVFRGNE-QTNNVLVRQLMNKQEMAPENASTSTSS 346
           LDKFVASQLS ED I       A+NN+F  +     N+LVR L  ++    ENASTSTSS
Sbjct: 297 LDKFVASQLSHEDVIKETNHPNASNNIFNTSSVHAANILVRHLNKQEASVQENASTSTSS 356

Query: 347 CQIDLWK 353
           CQIDLWK
Sbjct: 357 CQIDLWK 363

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296084195|emb|CBI24583.3| unnamed protein product [Vitis vinifera]

 Score =  541 bits (1395), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 272/365 (74%), Positives = 295/365 (80%), Gaps = 32/365 (8%)

Query: 1   MNAFSHVPPGFRFHPTDEELVDYYLRKKITSRRIDLDVIKDVDLYKIEPWDLQELCRIGT 60
           MN F+HVPPGFRFHPTDEELVDYYLRKK+TSRRIDLDVIKDVDLYKIEPWDLQELCRIGT
Sbjct: 1   MNTFAHVPPGFRFHPTDEELVDYYLRKKVTSRRIDLDVIKDVDLYKIEPWDLQELCRIGT 60

Query: 61  EEQNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIYSKHDLIGMRKTLVFYKGRA 120
           +EQNEWYFFSHKDKKYPTGTRTNRAT AGFWKATGRDKAIYSKHDLIGMRKTLVFYKGRA
Sbjct: 61  DEQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAIYSKHDLIGMRKTLVFYKGRA 120

Query: 121 PNGQKSDWIMHEYRLETDENGTPQEEGWVVCRVFKKRITTMRKVSEHESPCWYDDQVSFM 180
           PNGQKSDWIMHEYRLETDENGTPQ +GWVVCRVFKKRI T+RK+SEHESPCWYDDQVSFM
Sbjct: 121 PNGQKSDWIMHEYRLETDENGTPQAKGWVVCRVFKKRIATVRKMSEHESPCWYDDQVSFM 180

Query: 181 QDLDSPKPNSQHSNLAYHIPYGCKKELDHHLQYQVPHEHFLQLPLLESPKLMQTAS-NVN 239
            +L+SPK NS HSN+AYH+PY CKKE+D  LQYQ+PHE FLQLPLLESPKL+QTA+  V+
Sbjct: 181 PELESPKQNS-HSNMAYHLPYSCKKEID--LQYQIPHEQFLQLPLLESPKLLQTAATTVS 237

Query: 240 GNPMTAYGLDMNHASTLQQSSSLTHEEHM-----QQNLQFFGRDQNYEQAVDQVTDWRVL 294
            N M               S SLT +EH+     +QNL       N E AVDQVTDWRVL
Sbjct: 238 CNSM---------------SPSLTQDEHIRQQAHEQNLHPIYVYNNNELAVDQVTDWRVL 282

Query: 295 DKFVASQLSQEDSIAANN------NVFRGNEQTNNVLVRQLMNKQEMAPENASTSTSSCQ 348
            KFVASQLS ED    NN       +F   E  N  L+ Q +NK+E  PENASTSTSSCQ
Sbjct: 283 HKFVASQLSHEDVSKENNYSSNAATLFHAAEHPN--LLVQHLNKEEAVPENASTSTSSCQ 340

Query: 349 IDLWK 353
           I+LWK
Sbjct: 341 IELWK 345

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356544265|ref|XP_003540574.1| PREDICTED: NAC domain-containing protein 7-like [Glycine max]

 Score =  541 bits (1393), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 273/357 (76%), Positives = 301/357 (84%), Gaps = 14/357 (3%)

Query: 1   MNAFSHVPPGFRFHPTDEELVDYYLRKKITSRRIDLDVIKDVDLYKIEPWDLQELCRIGT 60
           MN F+HVPPGFRFHPTDEELVDYYLRKKITS RIDLDVIKDVDLYKIEPWDLQE+CRIGT
Sbjct: 12  MNTFTHVPPGFRFHPTDEELVDYYLRKKITSGRIDLDVIKDVDLYKIEPWDLQEICRIGT 71

Query: 61  EEQNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIYSKHDLIGMRKTLVFYKGRA 120
           EEQNEWYFFSHKDKKYPTGTRTNRAT AGFWKATGRDKAIYSKH+LIGMRKTLVFYKGRA
Sbjct: 72  EEQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAIYSKHELIGMRKTLVFYKGRA 131

Query: 121 PNGQKSDWIMHEYRLETDENGTPQEEGWVVCRVFKKRITTMRKVSEHESPCWYDDQVSFM 180
           PNGQKSDWIMHEYRLETDENGTPQEEGWVVCRVFKKR+TTMRKVSEH+SPCWYDDQV FM
Sbjct: 132 PNGQKSDWIMHEYRLETDENGTPQEEGWVVCRVFKKRVTTMRKVSEHDSPCWYDDQVPFM 191

Query: 181 QDLDSPKPNSQHSNLAYHIPYGCKKELDHHLQYQVPHEHFLQLPLLESPKLMQTASNVN- 239
            DLDSPK  SQ SNL Y +PY CK+ELD  L YQ+P +HFLQLPLLESPKL+Q+AS +  
Sbjct: 192 LDLDSPKQTSQ-SNLVYQLPYPCKQELD--LPYQLPRDHFLQLPLLESPKLLQSASAITP 248

Query: 240 GNPMTAYGLD-MNHASTLQQSSSLTHEEHMQQNLQF-FGRDQNYEQAVDQVTDWRVLDKF 297
            NPM AY LD +NH+++L    SL  EE  QQN Q  +G   + EQAVD V DWRVLDKF
Sbjct: 249 NNPMAAYVLDHVNHSTSL-LPPSLIQEE--QQNFQATYGNSNSNEQAVDPVIDWRVLDKF 305

Query: 298 VASQLSQEDSIAANNNVFRGNEQTNNVLVRQLMNKQEMAPE-NASTSTSSCQIDLWK 353
           VASQLSQ+   A+ +N+F+G + + NV  R L  ++ + PE NASTS SSC IDLWK
Sbjct: 306 VASQLSQD---ASKDNIFQGTDNS-NVQFRHLDKQELVVPEQNASTSNSSCPIDLWK 358

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356529883|ref|XP_003533516.1| PREDICTED: NAC domain-containing protein 7-like [Glycine max]

 Score =  528 bits (1359), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 269/360 (74%), Positives = 297/360 (82%), Gaps = 13/360 (3%)

Query: 1   MNAFSHVPPGFRFHPTDEELVDYYLRKKITSRRIDLDVIKDVDLYKIEPWDLQELCRIGT 60
           MN F+HVPPGFRFHPTDEELVDYYLRKKI SRRIDLDVIKDVDLYKIEPWDLQE+CRIG 
Sbjct: 12  MNTFTHVPPGFRFHPTDEELVDYYLRKKIASRRIDLDVIKDVDLYKIEPWDLQEICRIGA 71

Query: 61  EEQNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIYSKHDLIGMRKTLVFYKGRA 120
           EEQNEWYFFSHKDKKYPTGTRTNRAT AGFWKATGRDKAIYSKH+LIGMRKTLVFYKGRA
Sbjct: 72  EEQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAIYSKHELIGMRKTLVFYKGRA 131

Query: 121 PNGQKSDWIMHEYRLETDENGTPQEEGWVVCRVFKKRITTMRKVSEHESPCWYDDQVSFM 180
           PNGQKSDWIMHEYRLETDENGTPQEEGWVVCRVFKKR+TTMRKVSEH+S CWYD+QVSFM
Sbjct: 132 PNGQKSDWIMHEYRLETDENGTPQEEGWVVCRVFKKRVTTMRKVSEHDSSCWYDEQVSFM 191

Query: 181 QDLDSPKPNSQHSNLAY-HIPYGCKKELDHHLQYQVPHEHFLQLPLLESPKLMQTASNVN 239
           QDLDSPK   Q SNL Y  +PY CKKELD    YQ+P +HFLQLPLLESPKL+Q+AS + 
Sbjct: 192 QDLDSPKQTCQ-SNLVYQQLPYPCKKELDLP-PYQLPRDHFLQLPLLESPKLLQSASAIA 249

Query: 240 --GNPMTAYGLD-MNHASTLQQSSSLTHEEHMQQNLQF-FGRDQNY-EQAVDQVTDWRVL 294
              NPM  Y LD +NH+++L   S +  E   QQN Q  +G   N  EQAVD VTDWRVL
Sbjct: 250 PINNPMEGYVLDHVNHSTSLLPPSLIQQEHVGQQNFQATYGNINNSNEQAVDPVTDWRVL 309

Query: 295 DKFVASQLSQEDSIAANNNVFRGNEQTNNVLVRQLMNKQEMAPE-NASTSTSSCQIDLWK 353
           DKFVASQLSQ+   A+  N+F+G + + +V  R L  ++ + PE NASTS SSC IDLWK
Sbjct: 310 DKFVASQLSQD---ASKENIFQGTDNS-SVQFRHLDKQKLVVPEQNASTSNSSCPIDLWK 365

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	353
TAIR|locus:2026232	394	ANAC026 "Arabidopsis NAC domai	0.628	0.563	0.648	5.3e-98
TAIR|locus:2202028	395	NAC007 "NAC 007" [Arabidopsis	0.960	0.858	0.495	1.7e-82
TAIR|locus:2060979	365	VND1 "vascular related NAC-dom	0.920	0.890	0.509	2.2e-80
TAIR|locus:2122219	377	NAC076 "NAC domain containing	0.946	0.885	0.488	3.7e-80
TAIR|locus:2167923	348	NAC101 "NAC-domain protein 101	0.937	0.951	0.476	1.1e-76
TAIR|locus:2155046	292	NAC105 "NAC domain containing	0.623	0.753	0.573	2.8e-66
TAIR|locus:2035604	358	NAC012 "NAC domain containing	0.444	0.438	0.639	9e-65
TAIR|locus:2044360	365	NST1 "NAC SECONDARY WALL THICK	0.691	0.668	0.482	2.9e-62
TAIR|locus:2079562	334	NAC066 "NAC domain protein 66"	0.441	0.467	0.631	3.3e-59
UNIPROTKB|Q5Z6B6	276	NAC76 "NAC domain-containing p	0.696	0.891	0.509	4.5e-59

TAIR|locus:2026232 ANAC026 "Arabidopsis NAC domain containing protein 26" [Arabidopsis thaliana (taxid:3702)]

 Score = 791 (283.5 bits), Expect = 5.3e-98, Sum P(2) = 5.3e-98
 Identities = 155/239 (64%), Positives = 178/239 (74%)

Query:     1 MNAFSHVPPGFRFHPTDEELVDYYLRKKITSRRIDLDVIKDVDLYKIEPWDLQELCRIGT 60
             MN+FS VPPGFRFHPTDEELVDYYLRKK+ S+RI++D+IKDVDLYKIEP DLQELC+IG 
Sbjct:     1 MNSFSQVPPGFRFHPTDEELVDYYLRKKVASKRIEIDIIKDVDLYKIEPCDLQELCKIGN 60

Query:    61 EEQNEWYFFSHKDKKYPXXXXXXXXXXXXFWKATGRDKAIYSKHDLIGMRKTLVFYKGRA 120
             EEQ+EWYFFSHKDKKYP            FWKATGRDKAIY +H LIGMRKTLVFYKGRA
Sbjct:    61 EEQSEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYIRHSLIGMRKTLVFYKGRA 120

Query:   121 PNGQKSDWIMHEYRLETDENGTPQEEGWVVCRVFKKRIT-TMRKVSE-HESPC--WYDDQ 176
             PNGQKSDWIMHEYRLET ENGTPQEEGWVVCRVFKK++  T+RK+ + H SP   WYDDQ
Sbjct:   121 PNGQKSDWIMHEYRLETSENGTPQEEGWVVCRVFKKKLAATVRKMGDYHSSPSQHWYDDQ 180

Query:   177 VSFMQD---LDSPK---PNSQHSNLAYH---IPYGCKKELDHHLQYQVPHE---HFLQL 223
             +SFM       SP+   PN  H N  +H   +P G     +++   Q   E   H+ Q+
Sbjct:   181 LSFMASEIISSSPRQFLPN-HHYNRHHHQQTLPCGLNAFNNNNPNLQCKQELELHYNQM 238

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;TAS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2202028 NAC007 "NAC 007" [Arabidopsis thaliana (taxid:3702)]

 Score = 827 (296.2 bits), Expect = 1.7e-82, P = 1.7e-82
 Identities = 179/361 (49%), Positives = 235/361 (65%)

Query:     1 MNAFSHVPPGFRFHPTDEELVDYYLRKKITSRRIDLDVIKDVDLYKIEPWDLQELCRIGT 60
             MN+FSHVPPGFRFHPTDEELVDYYLRKK+ S+RI++D IKD+DLYKIEPWDLQELC+IG 
Sbjct:     1 MNSFSHVPPGFRFHPTDEELVDYYLRKKVASKRIEIDFIKDIDLYKIEPWDLQELCKIGH 60

Query:    61 EEQNEWYFFSHKDKKYPXXXXXXXXXXXXFWKATGRDKAIYSKHDLIGMRKTLVFYKGRA 120
             EEQ++WYFFSHKDKKYP            FWKATGRDKAIY +H LIGMRKTLVFYKGRA
Sbjct:    61 EEQSDWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYLRHSLIGMRKTLVFYKGRA 120

Query:   121 PNGQKSDWIMHEYRLETDENGTPQEEGWVVCRVFKKRITTMRKVSEHES-PC-WYDDQVS 178
             PNGQKSDWIMHEYRLETDENGTPQEEGWVVCRVFKKR+  +R++ +++S P  WYDDQ+S
Sbjct:   121 PNGQKSDWIMHEYRLETDENGTPQEEGWVVCRVFKKRLAAVRRMGDYDSSPSHWYDDQLS 180

Query:   179 FM-QDLDSPKPNSQHSNLAYHIPYGCKKELDHHLQYQVPHEHF-LQLPLLESPKLMQTAS 236
             FM  +L++   N Q   L  H     + E   H+ Y +    + L  P L+  + ++   
Sbjct:   181 FMASELET---NGQRRILPNHHQQQ-QHEHQQHMPYGLNASAYALNNPNLQCKQELELHY 236

Query:   237 N--VNGNPMTAYGLDMNHASTLQQ---SSSLTHEEHMQQNLQFFGRDQNYEQAVDQVTDW 291
             N  V  N +    LD +H S LQ     S    +++   N   +G   N +       + 
Sbjct:   237 NHLVQRNHL----LDESHLSFLQLPQLESPKIQQDNSNCNSLPYGTS-NIDNNSSHNANL 291

Query:   292 RVLDKFVASQLSQEDSIAANNNVFRGNEQT-NNVLVRQLMNK---QEMAPENASTSTSSC 347
             +  +     QL+Q +   ++  +  GNEQ  + V   ++++K    +++ E A+T+++S 
Sbjct:   292 QQSNIAHEEQLNQGNQNFSSLYMNSGNEQVMDQVTDWRVLDKFVASQLSNEEAATASASI 351

Query:   348 Q 348
             Q
Sbjct:   352 Q 352

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;TAS

GO:0009793 "embryo development ending in seed dormancy" evidence=NAS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0042546 "cell wall biogenesis" evidence=RCA

GO:0044036 "cell wall macromolecule metabolic process" evidence=RCA

TAIR|locus:2060979 VND1 "vascular related NAC-domain protein 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 807 (289.1 bits), Expect = 2.2e-80, P = 2.2e-80
 Identities = 179/351 (50%), Positives = 223/351 (63%)

Query:     7 VPPGFRFHPTDEELVDYYLRKKITSRRIDLDVIKDVDLYKIEPWDLQELCRIGTEEQNEW 66
             VPPGFRFHPTDEELV YYLRKKI S++IDLDVI+D+DLY+IEPWDLQE CRIG EEQNEW
Sbjct:     9 VPPGFRFHPTDEELVGYYLRKKIASQKIDLDVIRDIDLYRIEPWDLQEQCRIGYEEQNEW 68

Query:    67 YFFSHKDKKYPXXXXXXXXXXXXFWKATGRDKAIYSKHDLIGMRKTLVFYKGRAPNGQKS 126
             YFFSHKDKKYP            FWKATGRDKA+Y K  LIGMRKTLVFYKGRAPNG+KS
Sbjct:    69 YFFSHKDKKYPTGTRTNRATMAGFWKATGRDKAVYDKTKLIGMRKTLVFYKGRAPNGKKS 128

Query:   127 DWIMHEYRLETDENGTPQEEGWVVCRVFKKRITTMRKVSEHESPCWYDDQVSFMQDLDSP 186
             DWIMHEYRLE+DEN  PQEEGWVVCR FKKR T   K +E  S  ++ D+V+    ++S 
Sbjct:   129 DWIMHEYRLESDENAPPQEEGWVVCRAFKKRATGQAKNTETWSSSYFYDEVA-PNGVNSV 187

Query:   187 KPNSQHSNLAYHIPYG----CKKELD---HHLQYQVPHEHFLQLPLLESPKL--MQTASN 237
                  + +   H  +G    CK+EL+     + Y +    F+QLP L+SP L  M+  S+
Sbjct:   188 MDPIDYISKQQHNIFGKGLMCKQELEGMVDGINY-IQSNQFIQLPQLQSPSLPLMKRPSS 246

Query:   238 VNGNPMTAYGLDMNHASTLQQSSSLTHEEHMQQNLQFFGRDQNYEQAVDQVT-DWRVLDK 296
                  M+   +D N+   L     L  EE  +  ++  G D+  ++    +T +WR LDK
Sbjct:   247 ----SMSITSMDNNYNYKLP----LADEESFESFIR--GEDRRKKKKQVMMTGNWRELDK 296

Query:   297 FVASQL-SQED---SIAANNNVFRGNEQTNNVLVRQLMNKQEMAPENASTS 343
             FVASQL SQED   S  A +++   ++  N+V +   M   E   EN   S
Sbjct:   297 FVASQLMSQEDNGTSSFAGHHIVNEDKNNNDVEMDSSMFLSEREEENRFVS 347

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;TAS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0010200 "response to chitin" evidence=IEP

GO:0009741 "response to brassinosteroid stimulus" evidence=RCA

GO:0010089 "xylem development" evidence=RCA

TAIR|locus:2122219 NAC076 "NAC domain containing protein 76" [Arabidopsis thaliana (taxid:3702)]

 Score = 805 (288.4 bits), Expect = 3.7e-80, P = 3.7e-80
 Identities = 172/352 (48%), Positives = 224/352 (63%)

Query:     7 VPPGFRFHPTDEELVDYYLRKKITSRRIDLDVIKDVDLYKIEPWDLQELCRIGTEEQNEW 66
             VPPGFRFHPTDEELV YYLRKK+ S++IDLDVI+D+DLY+IEPWDLQE CRIG EE+NEW
Sbjct:    10 VPPGFRFHPTDEELVGYYLRKKVASQKIDLDVIRDIDLYRIEPWDLQESCRIGYEERNEW 69

Query:    67 YFFSHKDKKYPXXXXXXXXXXXXFWKATGRDKAIYSKHDLIGMRKTLVFYKGRAPNGQKS 126
             YFFSHKDKKYP            FWKATGRDKA+Y K  LIGMRKTLVFYKGRAPNGQK+
Sbjct:    70 YFFSHKDKKYPTGTRTNRATMAGFWKATGRDKAVYDKSKLIGMRKTLVFYKGRAPNGQKT 129

Query:   127 DWIMHEYRLETDENGTPQEEGWVVCRVFKKR-ITTMRKVSEH-ESPCWYDDQVSFMQDLD 184
             DWIMHEYRLE+DEN  PQEEGWVVCR FKK+ +T   K +E   S  +YD+  S ++ + 
Sbjct:   130 DWIMHEYRLESDENAPPQEEGWVVCRAFKKKPMTGQAKNTETWSSSYFYDELPSGVRSVT 189

Query:   185 SPKP--NSQHSNL-AYHIPYGCKKELD-HHLQYQVPH-EHFLQLPLLESPKLMQTASNVN 239
              P    + Q  N+ A  + +  K+EL+   +     H + F+QLP LESP L  T   V+
Sbjct:   190 EPLNYVSKQKQNVFAQDLMF--KQELEGSDIGLNFIHCDQFIQLPQLESPSLPLTKRPVS 247

Query:   240 GNPMTAYGLDMNHASTLQQSSSLTHEEHMQQNLQFFGRDQNYEQAVDQVTDWRVLDKFVA 299
                +T+  L+ N    + +   +  +      +    +D+  ++     TDWR LDKFVA
Sbjct:   248 LTSITS--LEKN--KNIYKRHLIEEDVSFNALISSGNKDKKKKKTSVMTTDWRALDKFVA 303

Query:   300 SQL-SQEDSIAANNNVFRGNEQTNNVLVRQLMNKQEMAPENASTSTSSCQID 350
             SQL SQED ++     F G+ + +N  +    N++     +  T++S+   D
Sbjct:   304 SQLMSQEDGVSG----FGGHHEEDNNKIGHYNNEESNNKGSVETASSTLLSD 351

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;TAS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0009741 "response to brassinosteroid stimulus" evidence=RCA

GO:0010089 "xylem development" evidence=RCA

TAIR|locus:2167923 NAC101 "NAC-domain protein 101" [Arabidopsis thaliana (taxid:3702)]

 Score = 772 (276.8 bits), Expect = 1.1e-76, P = 1.1e-76
 Identities = 173/363 (47%), Positives = 207/363 (57%)

Query:     1 MNAFSHVPPGFRFHPTDEELVDYYLRKKITSRRIDLDVIKDVDLYKIEPWDLQELCRIGT 60
             M + +H+PPG+RFHPTDEELVDYYL+ K+    + +DVIKDVDLYKIEPWD+QELC  GT
Sbjct:     1 MESLAHIPPGYRFHPTDEELVDYYLKNKVAFPGMQVDVIKDVDLYKIEPWDIQELCGRGT 60

Query:    61 EEQNEWYFFSHKDKKYPXXXXXXXXXXXXFWKATGRDKAIYSKHDLIGMRKTLVFYKGRA 120
              E+ EWYFFSHKDKKYP            FWKATGRDKAIYSK +L+GMRKTLVFYKGRA
Sbjct:    61 GEEREWYFFSHKDKKYPTGTRTNRATGSGFWKATGRDKAIYSKQELVGMRKTLVFYKGRA 120

Query:   121 PNGQKSDWIMHEYRLETDENGTPQEEGWVVCRVFKKRITTMRKVSEHESPCWYDDQVS-- 178
             PNGQKSDWIMHEYRLETDENG P EEGWVVCR FKK++TTM   +          Q S  
Sbjct:   121 PNGQKSDWIMHEYRLETDENGPPHEEGWVVCRAFKKKLTTMNYNNPRTMMGSSSGQESNW 180

Query:   179 FMQDLDSPKPNSQHSNLAYHIPYGCKKELDHHLQYQVPHEHFLQ-LPLLESPKLMQTASN 237
             F Q +D    N       YH+P     +L+    +Q      L  L   +        S 
Sbjct:   181 FTQQMDVGNGNY------YHLP-----DLESPRMFQGSSSSSLSSLHQNDQDPYGVVLST 229

Query:   238 VNGNPMTAYGLDMNHASTLQQSSSLTHE----EHMQQNLQFFGRDQNYEQAVDQVTDWRV 293
             +N  P T    D  H  T      +       +H Q  L     D N     DQV DW+ 
Sbjct:   230 INATPTTIMQRDDGHVITNDDDHMIMMNTSTGDHHQSGL-LVNDDHN-----DQVMDWQT 283

Query:   294 LDKFVASQL--SQEDSIAANNNVFRGNEQTNNVLVRQLMNKQE--MAPENASTSTSSCQI 349
             LDKFVASQL  SQE+    N +    ++ ++N     L  +Q   M   NAS+S+S C  
Sbjct:   284 LDKFVASQLIMSQEEE-EVNKDP---SDNSSNETFHHLSEEQAATMVSMNASSSSSPCSF 339

Query:   350 DLW 352
               W
Sbjct:   340 YSW 342

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;TAS

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IDA

GO:0009735 "response to cytokinin stimulus" evidence=IEP

GO:0009737 "response to abscisic acid stimulus" evidence=IEP

GO:0009741 "response to brassinosteroid stimulus" evidence=IEP;RCA

GO:0010089 "xylem development" evidence=RCA;IMP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

GO:0007155 "cell adhesion" evidence=RCA

GO:0010014 "meristem initiation" evidence=RCA

GO:0010090 "trichome morphogenesis" evidence=RCA

GO:0044036 "cell wall macromolecule metabolic process" evidence=RCA

GO:0045010 "actin nucleation" evidence=RCA

GO:0048765 "root hair cell differentiation" evidence=RCA

GO:0071555 "cell wall organization" evidence=RCA

TAIR|locus:2155046 NAC105 "NAC domain containing protein 105" [Arabidopsis thaliana (taxid:3702)]

 Score = 674 (242.3 bits), Expect = 2.8e-66, P = 2.8e-66
 Identities = 137/239 (57%), Positives = 162/239 (67%)

Query:     7 VPPGFRFHPTDEELVDYYLRKKITSRRIDLDVIKDVDLYKIEPWDLQELCRIGTEEQNEW 66
             +PPGFRFHPTDEELV YYL+KKI S+RIDLDVI+++DLYKIEPWDLQE CRIG EEQ EW
Sbjct:    12 IPPGFRFHPTDEELVGYYLKKKIASQRIDLDVIREIDLYKIEPWDLQERCRIGYEEQTEW 71

Query:    67 YFFSHKDKKYPXXXXXXXXXXXXFWKATGRDKAIYSKHDLIGMRKTLVFYKGRAPNGQKS 126
             YFFSH+DKKYP            FWKATGRDKA+Y    LIGMRKTLVFY+GRAPNGQKS
Sbjct:    72 YFFSHRDKKYPTGTRTNRATVAGFWKATGRDKAVYLNSKLIGMRKTLVFYRGRAPNGQKS 131

Query:   127 DWIMHEY-RLETDENGTPQEEGWVVCRVFKKRITTMRKVSEHESP-CWYDDQVSFMQDLD 184
             DWI+HEY  LE+ +N  PQEEGWVVCR FKKR T   K  +   P C + D  + ++ LD
Sbjct:   132 DWIIHEYYSLESHQNSPPQEEGWVVCRAFKKRTTIPTKRRQLWDPNCLFYDDATLLEPLD 191

Query:   185 SPKPNSQHSNLAYHIPYGCKKEL---DHHLQ-------YQ--VPHEHFLQLPLLESPKL 231
                  ++H+      P+  K+EL     H+Q       Y   +  + F QLP LESP L
Sbjct:   192 K---RARHNPDFTATPF--KQELLSEASHVQDGDFGSMYLQCIDDDQFSQLPQLESPSL 245

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;TAS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0009741 "response to brassinosteroid stimulus" evidence=RCA

GO:0010089 "xylem development" evidence=RCA

TAIR|locus:2035604 NAC012 "NAC domain containing protein 12" [Arabidopsis thaliana (taxid:3702)]

 Score = 563 (203.2 bits), Expect = 9.0e-65, Sum P(3) = 9.0e-65
 Identities = 108/169 (63%), Positives = 125/169 (73%)

Query:     1 MNAFSHVPPGFRFHPTDEELVDYYLRKKITSRRIDLDVIKDVDLYKIEPWDLQELCRIGT 60
             +N  S VPPGFRFHPT+EEL+ YYLRKK+ S++IDLDVI++VDL K+EPWD+QE CRIG+
Sbjct:    10 INGQSKVPPGFRFHPTEEELLHYYLRKKVNSQKIDLDVIREVDLNKLEPWDIQEECRIGS 69

Query:    61 EEQNEWYFFSHKDKKYPXXXXXXXXXXXXFWKATGRDKAIYSKHDLIGMRKTLVFYKGRA 120
               QN+WYFFSHKDKKYP            FWKATGRDK I S    IG+RKTLVFYKGRA
Sbjct:    70 TPQNDWYFFSHKDKKYPTGTRTNRATVAGFWKATGRDKIICSCVRRIGLRKTLVFYKGRA 129

Query:   121 PNGQKSDWIMHEYRLETD--ENG-------TPQ---EEGWVVCRVFKKR 157
             P+GQKSDWIMHEYRL+     NG        P    EEGWVVCRVF+K+
Sbjct:   130 PHGQKSDWIMHEYRLDDTPMSNGYADVVTEDPMSYNEEGWVVCRVFRKK 178

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0009834 "secondary cell wall biogenesis" evidence=IGI;IMP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

GO:0009809 "lignin biosynthetic process" evidence=IGI

GO:0010047 "fruit dehiscence" evidence=IMP

GO:0043565 "sequence-specific DNA binding" evidence=IDA

GO:0010413 "glucuronoxylan metabolic process" evidence=RCA

GO:0045492 "xylan biosynthetic process" evidence=RCA

TAIR|locus:2044360 NST1 "NAC SECONDARY WALL THICKENING PROMOTING FACTOR1" [Arabidopsis thaliana (taxid:3702)]

 Score = 596 (214.9 bits), Expect = 2.9e-62, Sum P(2) = 2.9e-62
 Identities = 138/286 (48%), Positives = 171/286 (59%)

Query:     1 MNAFSHVPPGFRFHPTDEELVDYYLRKKITSRRIDLDVIKDVDLYKIEPWDLQELCRIGT 60
             +N  S VPPGFRFHPT+EEL+ YYLRKK+ S  IDLDVI+DVDL K+EPWD+QE+C+IGT
Sbjct:    10 VNGQSQVPPGFRFHPTEEELLQYYLRKKVNSIEIDLDVIRDVDLNKLEPWDIQEMCKIGT 69

Query:    61 EEQNEWYFFSHKDKKYPXXXXXXXXXXXXFWKATGRDKAIYSKHDLIGMRKTLVFYKGRA 120
               QN+WYFFSHKDKKYP            FWKATGRDK IYS    IGMRKTLVFYKGRA
Sbjct:    70 TPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKIIYSNGRRIGMRKTLVFYKGRA 129

Query:   121 PNGQKSDWIMHEYRLETD----ENGT-----------PQEEGWVVCRVFKKRITTMRKVS 165
             P+GQKSDWIMHEYRL+ +    E+ T            Q+EGWVVCR+FKK+   + K  
Sbjct:   130 PHGQKSDWIMHEYRLDDNIISPEDVTVHEVVSIIGEASQDEGWVVCRIFKKK--NLHKTL 187

Query:   166 EHESPCWYDDQVSFMQDLDSPKPNSQH----SNLAYHIPY---GCKKELDHHLQYQVPHE 218
                SP       S     D+PK  S        L   +      CK+EL+         +
Sbjct:   188 N--SPV---GGASLSGGGDTPKTTSSQIFNEDTLDQFLELMGRSCKEELNL--------D 234

Query:   219 HFLQLPLLESPKLMQTASNVN-GNPMTAYGLDMNHASTLQQSSSLT 263
              F++LP LESP   Q  +N +  +P T + +   H S +  +S +T
Sbjct:   235 PFMKLPNLESPN-SQAINNCHVSSPDTNHNI---HVSNVVDTSFVT 276

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0009793 "embryo development ending in seed dormancy" evidence=NAS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0009834 "secondary cell wall biogenesis" evidence=IGI;IMP

GO:0009901 "anther dehiscence" evidence=IGI

GO:0009809 "lignin biosynthetic process" evidence=IGI

GO:0010047 "fruit dehiscence" evidence=IMP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

TAIR|locus:2079562 NAC066 "NAC domain protein 66" [Arabidopsis thaliana (taxid:3702)]

 Score = 571 (206.1 bits), Expect = 3.3e-59, Sum P(2) = 3.3e-59
 Identities = 108/171 (63%), Positives = 125/171 (73%)

Query:     1 MNAFSHVPPGFRFHPTDEELVDYYLRKKITSRRIDLDVIKDVDLYKIEPWDLQELCRIGT 60
             +N  S VPPGFRFHPT+EEL+ YYLRKKI++ +IDLDVI D+DL K+EPWD+QE+C+IGT
Sbjct:     5 VNGQSQVPPGFRFHPTEEELLKYYLRKKISNIKIDLDVIPDIDLNKLEPWDIQEMCKIGT 64

Query:    61 EEQNEWYFFSHKDKKYPXXXXXXXXXXXXFWKATGRDKAIYSKHDLIGMRKTLVFYKGRA 120
               QN+WYF+SHKDKKYP            FWKATGRDK IY+  D IGMRKTLVFYKGRA
Sbjct:    65 TPQNDWYFYSHKDKKYPTGTRTNRATTVGFWKATGRDKTIYTNGDRIGMRKTLVFYKGRA 124

Query:   121 PNGQKSDWIMHEYRLET----------DENGTP-----QEEGWVVCRVFKK 156
             P+GQKSDWIMHEYRL+           D N         +EGWVVCRVFKK
Sbjct:   125 PHGQKSDWIMHEYRLDESVLISSCGDHDVNVETCDVIGSDEGWVVCRVFKK 175

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0009834 "secondary cell wall biogenesis" evidence=IMP

GO:0009901 "anther dehiscence" evidence=IGI

GO:0016020 "membrane" evidence=IDA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

UNIPROTKB|Q5Z6B6 NAC76 "NAC domain-containing protein 76" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 606 (218.4 bits), Expect = 4.5e-59, P = 4.5e-59
 Identities = 130/255 (50%), Positives = 158/255 (61%)

Query:     7 VPPGFRFHPTDEELVDYYLRKKITSRRIDLDVIKDVDLYKIEPWDLQELCRIGTEEQNEW 66
             VPPGFRFHPTDEEL+ YYLRKK+    IDLDVI+++DL K+EPWDL++ CRIGT  QNEW
Sbjct:    10 VPPGFRFHPTDEELLYYYLRKKVAYEAIDLDVIREIDLNKLEPWDLKDRCRIGTGPQNEW 69

Query:    67 YFFSHKDKKYPXXXXXXXXXXXXFWKATGRDKAIYSKHDL-IGMRKTLVFYKGRAPNGQK 125
             YFFSHKDKKYP            FWKATGRDKAI+  +   IGMRKTLVFY GRAP+G+K
Sbjct:    70 YFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIFLANACRIGMRKTLVFYVGRAPHGKK 129

Query:   126 SDWIMHEYRLETDENGTPQEEGWVVCRVFKKRITTMRKVSEHESPCWYDDQVSFMQDLDS 185
             +DWIMHEYRL+ D N   QE+GWVVCRVF K+ +  R ++  +     DD +  +     
Sbjct:   130 TDWIMHEYRLDQD-NVDVQEDGWVVCRVFMKK-SYQRGLNPADMAAVDDDDL--LHHHHH 185

Query:   186 PKPNSQ-HSNLAYHIPYGCKKELDHHLQYQVPHEHFLQLPLLE-SPKLMQTASNVNGNPM 243
             P P +Q H   A H   G      HHL    PH H+   P  + S +L Q  S     P 
Sbjct:   186 PFPPAQLHGGAADHKHDGAGGHHHHHLMQ--PHHHYDDFPSFDPSMQLPQLMSADQPPPP 243

Query:   244 TAYGLDMNHASTLQQ 258
                 L    AS+LQ+
Sbjct:   244 PPSLLPGGTASSLQR 258

GO:0005634 "nucleus" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=ISS

GO:0009834 "secondary cell wall biogenesis" evidence=ISS

GO:0048829 "root cap development" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9FWX2	NAC7_ARATH	No assigned EC number	0.5808	0.9971	0.8911	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: NAC037 NAC domain protein, IPR003441 (370 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	353
pfam02365	130	pfam02365, NAM, No apical meristem (NAM) protein	2e-78

>gnl|CDD|216997 pfam02365, NAM, No apical meristem (NAM) protein

 Score =  235 bits (603), Expect = 2e-78
 Identities = 82/131 (62%), Positives = 105/131 (80%), Gaps = 4/131 (3%)

Query: 8   PPGFRFHPTDEELVDYYLRKKITSRRIDL-DVIKDVDLYKIEPWDLQELCRIGTEEQNEW 66
           PPGFRFHPTDEELV YYL++K+  + + L DVI +VD+YK EPWDL +  +    +  EW
Sbjct: 2   PPGFRFHPTDEELVVYYLKRKVLGKPLPLLDVIPEVDIYKFEPWDLPD-GKAKGGD-REW 59

Query: 67  YFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIYSKHD-LIGMRKTLVFYKGRAPNGQK 125
           YFFS +D+KYP G+RTNRAT +G+WKATG+DK + SK   ++GM+KTLVFYKGRAP G+K
Sbjct: 60  YFFSPRDRKYPNGSRTNRATGSGYWKATGKDKPVLSKGGEVVGMKKTLVFYKGRAPKGEK 119

Query: 126 SDWIMHEYRLE 136
           +DW+MHEYRLE
Sbjct: 120 TDWVMHEYRLE 130

This is a family of no apical meristem (NAM) proteins these are plant development proteins. Mutations in NAM result in the failure to develop a shoot apical meristem in petunia embryos. NAM is indicated as having a role in determining positions of meristems and primordial. One member of this family NAP (NAC-like, activated by AP3/PI) is encoded by the target genes of the AP3/PI transcriptional activators and functions in the transition between growth by cell division and cell expansion in stamens and petals. Length = 130

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	353
PF02365	129	NAM: No apical meristem (NAM) protein; InterPro: I	100.0

>PF02365 NAM: No apical meristem (NAM) protein; InterPro: IPR003441 The NAC domain (for Petunia hybrida (Petunia) NAM and for Arabidopsis ATAF1, ATAF2, and CUC2) is an N-terminal module of ~160 amino acids, which is found in proteins of the NAC family of plant-specific transcriptional regulators (no apical meristem (NAM) proteins) []

Probab=100.00  E-value=4e-43  Score=299.83  Aligned_cols=127  Identities=54%  Similarity=1.101  Sum_probs=96.5

Q ss_pred             CCCCceECCChHHHHHHHHHHHHhCCCCCC-CceeeccCCCCCCCchhhhhhcCCCCCceEEEEecCCCCCCCCCccccc
Q 018596            7 VPPGFRFHPTDEELVDYYLRKKITSRRIDL-DVIKDVDLYKIEPWDLQELCRIGTEEQNEWYFFSHKDKKYPTGTRTNRA   85 (353)
Q Consensus         7 LPPGfRF~PTDeELV~~YLr~Kv~g~~l~~-~vI~evDVY~~ePWdL~~~~~~g~~~~~eWYFFs~r~kK~~~G~R~nRa   85 (353)
                      |||||||+|||+|||.+||++|+.|.+++. .+|+++|||+.|||+|+....   ..+.+||||+++.+++++|.|.+|+
T Consensus         1 LP~G~rF~PtD~ELi~~yL~~k~~g~~~~~~~~i~~~Diy~~~P~~L~~~~~---~~~~~~yFF~~~~~~~~~~~r~~R~   77 (129)
T PF02365_consen    1 LPPGFRFRPTDEELINHYLRPKILGEPLPCEDVIHDVDIYSAHPWELPAKFK---GGDEEWYFFSPRKKKYPNGGRPNRV   77 (129)
T ss_dssp             --TTEEE---HHHHHHCTHHHHHTT-HHCS-CHSEE--GGGS-GGGCHHHSS---S-SSEEEEEEE----------S-EE
T ss_pred             CCCceEecCChHHHHHHHHHHHhcCCCCCcccceeecccCccChHHhhhhcc---CCCceEEEEEecccccCCccccccc
Confidence            899999999999999999999999999887 799999999999999995222   2346999999999999999999999


Q ss_pred             ccCCeeeecCCCceeec-CCeeEEEEEEEEEeecCCCCCCCcCeEEEEEEeC
Q 018596           86 TTAGFWKATGRDKAIYS-KHDLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLE  136 (353)
Q Consensus        86 tg~G~WK~tG~~k~I~~-~g~~IG~KKtLvFy~gr~p~g~KT~WiMhEYrL~  136 (353)
                      +++|+||.+|++++|.+ ++.+||+|++|+||.++.+++.+|+|+||||+|+
T Consensus        78 ~~~G~Wk~~g~~~~i~~~~g~~iG~k~~l~f~~~~~~~~~kt~W~M~EY~L~  129 (129)
T PF02365_consen   78 TGGGYWKSTGKEKPIKDPGGKVIGFKKTLVFYSGKSPNGKKTGWVMHEYSLE  129 (129)
T ss_dssp             ETTEEEEEECEEEEEEE-TTCEEEEEEEEEEEESSTTS-EEEEEEEEEEEE-
T ss_pred             ccceEEeecccccccccccceeeeeEEEEEEEeccCCCCCcCCeEEEEEEeC
Confidence            99999999999999998 8899999999999999888999999999999984

NAC proteins are involved in developmental processes, including formation of the shoot apical meristem, floral organs and lateral shoots, as well as in plant hormonal control and defence. The NAC domain is accompanied by diverse C-terminal transcriptional activation domains. The NAC domain has been shown to be a DNA-binding domain (DBD) and a dimerization domain [,]. The NAC domain can be subdivided into five subdomains (A-E). Each subdomain is distinguishable by blocks of heterogeneous amino acids or gaps. While the NAC domains were rich in basic amino acids (R, K and H) as a whole, the distribution of positive and negative amino acids in each subdomain were unequal. Subdomains C and D are rich in basic amino acids but poor in acidic amino acids, while subdomain B contains a high proportion of acidic amino acids. Putative nuclear localization signals (NLS) have been detected in subdomains C and D []. The DBD is contained within a 60 amino acid region located within subdomains D and E []. The overall structure of the NAC domain monomer consists of a very twisted antiparallel beta-sheet, which packs against an N-terminal alpha-helix on one side and one shorter helix on the other side surrounded by a few helical elements. The structure suggests that the NAC domain mediates dimerization through conserved interactions including a salt bridge, and DNA binding through the NAC dimer face rich in positive charges [].; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 1UT4_A 3SWM_B 4DUL_B 3SWP_D 1UT7_B 3ULX_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	353
3ulx_A	174	Crystal Structural Of The Conserved Domain Of Rice		6e-37
1ut4_A	171	Structure Of The Conserved Domain Of Anac, A Member		2e-36
3swm_A	174	The Nac Domain Of Anac019 In Complex With Dna, Gold		2e-36

>pdb|3ULX|A Chain A, Crystal Structural Of The Conserved Domain Of Rice Stress-Responsive Nac1 Length = 174

Iteration: 1
 Score =  151 bits (381), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 71/159 (44%), Positives = 102/159 (64%), Gaps = 10/159 (6%)
Query: 6   HVPPGFRFHPTDEELVDYYLRKKITSRRIDLDVIKDVDLYKIEPWDLQELCRIGTEEQNE 65
           ++PPGFRFHPTD+ELV++YL +K   +R+ + +I +VDLYK +PWDL E    G  E   
Sbjct: 14  NLPPGFRFHPTDDELVEHYLCRKAAGQRLPVPIIAEVDLYKFDPWDLPERALFGARE--- 70
Query: 66  WYFFSHKDKKYPXXXXXXXXXXXXFWKATGRDKAIYSKHDLIGMRKTLVFYKGRAPNGQK 125
           WYFF+ +D+KYP            +WKATG DK +  +   +G++K LVFY G+AP G K
Sbjct: 71  WYFFTPRDRKYPNGSRPNRAAGNGYWKATGADKPVAPRGRTLGIKKALVFYAGKAPRGVK 130
Query: 126 SDWIMHEYRL-------ETDENGTPQEEGWVVCRVFKKR 157
           +DWIMHEYRL          + G+ + + WV+CR++ K+
Sbjct: 131 TDWIMHEYRLADAGRAAAGAKKGSLRLDDWVLCRLYNKK 169

>pdb|1UT4|A Chain A, Structure Of The Conserved Domain Of Anac, A Member Of The Nac Family Of Transcription Factors Length = 171

Iteration: 1
 Score =  149 bits (377), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 70/158 (44%), Positives = 100/158 (63%), Gaps = 5/158 (3%)
Query: 7   VPPGFRFHPTDEELVDYYLRKKITSRRIDLDVIKDVDLYKIEPWDLQELCRIGTEEQNEW 66
           +PPGFRF+PTDEEL+  YL +K       L +I ++DLYK +PW L      G   + EW
Sbjct: 17  LPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFG---EKEW 73
Query: 67  YFFSHKDKKYPXXXXXXXXXXXXFWKATGRDKAIYSKHDLIGMRKTLVFYKGRAPNGQKS 126
           YFFS +D+KYP            +WKATG DK I ++   +G++K LVFY G+AP G K+
Sbjct: 74  YFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAPKGTKT 133
Query: 127 DWIMHEYRL--ETDENGTPQEEGWVVCRVFKKRITTMR 162
           +WIMHEYRL   +  NG+ + + WV+CR++KK+ +  +
Sbjct: 134 NWIMHEYRLIEPSRRNGSTKLDDWVLCRIYKKQSSAQK 171

>pdb|3SWM|A Chain A, The Nac Domain Of Anac019 In Complex With Dna, Gold Derivative Length = 174

Iteration: 1
 Score =  149 bits (377), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 70/153 (45%), Positives = 98/153 (64%), Gaps = 5/153 (3%)
Query: 7   VPPGFRFHPTDEELVDYYLRKKITSRRIDLDVIKDVDLYKIEPWDLQELCRIGTEEQNEW 66
           +PPGFRF+PTDEEL+  YL +K       L +I ++DLYK +PW L      G   + EW
Sbjct: 20  LPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFG---EKEW 76
Query: 67  YFFSHKDKKYPXXXXXXXXXXXXFWKATGRDKAIYSKHDLIGMRKTLVFYKGRAPNGQKS 126
           YFFS +D+KYP            +WKATG DK I ++   +G++K LVFY G+AP G K+
Sbjct: 77  YFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAPKGTKT 136
Query: 127 DWIMHEYRL--ETDENGTPQEEGWVVCRVFKKR 157
           +WIMHEYRL   +  NG+ + + WV+CR++KK+
Sbjct: 137 NWIMHEYRLIEPSRRNGSTKLDDWVLCRIYKKQ 169

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	353
1ut7_A	171	No apical meristem protein; transcription regulati	1e-100
3ulx_A	174	Stress-induced transcription factor NAC1; NAC fami	1e-100
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-08

>1ut7_A No apical meristem protein; transcription regulation, transcription, transcription factor, DNA binding, abscisic acid response, NAC domain; 1.9A {Arabidopsis thaliana} SCOP: b.143.1.1 PDB: 1ut4_A 4dul_A 3swp_A 3swm_A Length = 171

 Score =  293 bits (751), Expect = e-100
 Identities = 75/153 (49%), Positives = 105/153 (68%), Gaps = 5/153 (3%)

Query: 7   VPPGFRFHPTDEELVDYYLRKKITSRRIDLDVIKDVDLYKIEPWDLQELCRIGTEEQNEW 66
           +PPGFRF+PTDEEL+  YL +K       L +I ++DLYK +PW L      G   + EW
Sbjct: 17  LPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFG---EKEW 73

Query: 67  YFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIYSKHDLIGMRKTLVFYKGRAPNGQKS 126
           YFFS +D+KYP G+R NR   +G+WKATG DK I ++   +G++K LVFY G+AP G K+
Sbjct: 74  YFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAPKGTKT 133

Query: 127 DWIMHEYRLE--TDENGTPQEEGWVVCRVFKKR 157
           +WIMHEYRL   +  NG+ + + WV+CR++KK+
Sbjct: 134 NWIMHEYRLIEPSRRNGSTKLDDWVLCRIYKKQ 166

>3ulx_A Stress-induced transcription factor NAC1; NAC family, stress-responsive, DNA binding protein; 2.60A {Oryza sativa subsp} Length = 174

 Score =  292 bits (750), Expect = e-100
 Identities = 78/164 (47%), Positives = 109/164 (66%), Gaps = 10/164 (6%)

Query: 1   MNAFSHVPPGFRFHPTDEELVDYYLRKKITSRRIDLDVIKDVDLYKIEPWDLQELCRIGT 60
             A  ++PPGFRFHPTD+ELV++YL +K   +R+ + +I +VDLYK +PWDL E    G 
Sbjct: 9   AEAELNLPPGFRFHPTDDELVEHYLCRKAAGQRLPVPIIAEVDLYKFDPWDLPERALFG- 67

Query: 61  EEQNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIYSKHDLIGMRKTLVFYKGRA 120
               EWYFF+ +D+KYP G+R NRA   G+WKATG DK +  +   +G++K LVFY G+A
Sbjct: 68  --AREWYFFTPRDRKYPNGSRPNRAAGNGYWKATGADKPVAPRGRTLGIKKALVFYAGKA 125

Query: 121 PNGQKSDWIMHEYRLETDE-------NGTPQEEGWVVCRVFKKR 157
           P G K+DWIMHEYRL            G+ + + WV+CR++ K+
Sbjct: 126 PRGVKTDWIMHEYRLADAGRAAAGAKKGSLRLDDWVLCRLYNKK 169

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 55.2 bits (132), Expect = 2e-08
 Identities = 61/376 (16%), Positives = 119/376 (31%), Gaps = 103/376 (27%)

Query: 14  HPTDEELVDY-YLRKKITSRRIDLDVIKDVDLYKIEPWDLQELCR--IGTEEQNEWYFFS 70
           H  D E  ++ Y  K I S   D   + + D       D+Q++ +  +  EE +      
Sbjct: 5   HHMDFETGEHQYQYKDILSVFED-AFVDNFDCK-----DVQDMPKSILSKEEIDHIIMSK 58

Query: 71  HKDKKYPTGTRTNRATTAGFWKATGRDKAIYSKHDLIGMRKTLVFYKGR-APNGQKSDWI 129
                    + T R     FW    + + +  K           F +     N     ++
Sbjct: 59  DAV------SGTLRL----FWTLLSKQEEMVQK-----------FVEEVLRIN---YKFL 94

Query: 130 MHEYRLETDENGTPQEEGWVVCR--------VFKK----RITTMRKVSEHESPCWYDDQV 177
           M   + E  +        ++  R        VF K    R+    K+ +           
Sbjct: 95  MSPIKTEQRQPSMMTRM-YIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQA---------- 143

Query: 178 SFMQDLDSPKPNSQHSNLAYHIPYGCKKE-------LDHHLQYQVPHEHF-LQLPLLESP 229
                L   +P     N+      G  K        L + +Q ++  + F L L    SP
Sbjct: 144 -----LLELRP---AKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSP 195

Query: 230 K-LMQTASNVNGNPMTAYGLDMNHASTLQQSSSLTHEEH-MQQNLQFFGRDQNYEQA--- 284
           + +++    +       Y +D N  S    SS++    H +Q  L+   + + YE     
Sbjct: 196 ETVLEMLQKLL------YQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLV 249

Query: 285 VDQVTDWRVLDKF--------------VASQLS----QEDSIAANNNVFRGNEQTNNVLV 326
           +  V + +  + F              V   LS       S+  ++      ++  ++L+
Sbjct: 250 LLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTL-TPDEVKSLLL 308

Query: 327 RQLMNKQEMAPENAST 342
           + L  + +  P    T
Sbjct: 309 KYLDCRPQDLPREVLT 324

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	353
3ulx_A	174	Stress-induced transcription factor NAC1; NAC fami	100.0
1ut7_A	171	No apical meristem protein; transcription regulati	100.0

>3ulx_A Stress-induced transcription factor NAC1; NAC family, stress-responsive, DNA binding protein; 2.60A {Oryza sativa subsp} SCOP: b.143.1.1

Probab=100.00  E-value=1.1e-56  Score=403.70  Aligned_cols=154  Identities=50%  Similarity=1.049  Sum_probs=135.1

Q ss_pred             CCCCCCCCCceECCChHHHHHHHHHHHHhCCCCCCCceeeccCCCCCCCchhhhhhcCCCCCceEEEEecCCCCCCCCCc
Q 018596            2 NAFSHVPPGFRFHPTDEELVDYYLRKKITSRRIDLDVIKDVDLYKIEPWDLQELCRIGTEEQNEWYFFSHKDKKYPTGTR   81 (353)
Q Consensus         2 ~~~s~LPPGfRF~PTDeELV~~YLr~Kv~g~~l~~~vI~evDVY~~ePWdL~~~~~~g~~~~~eWYFFs~r~kK~~~G~R   81 (353)
                      .+...|||||||||||||||.|||++|+.|.+++.++|.++|||++|||+|++.+..|   +.+|||||++++||++|.|
T Consensus        10 ~~~~~LPpGfRF~PTDeELV~~YL~~K~~g~~~~~~~I~evDvy~~~Pw~Lp~~~~~g---~~ewYFFs~r~~ky~~g~R   86 (174)
T 3ulx_A           10 EAELNLPPGFRFHPTDDELVEHYLCRKAAGQRLPVPIIAEVDLYKFDPWDLPERALFG---AREWYFFTPRDRKYPNGSR   86 (174)
T ss_dssp             CSTTTCCTTCCCCCCHHHHHHHTHHHHHHTCCCSSSCCEECCGGGSCGGGSGGGCSSC---SSEEEEEEECCC-----CC
T ss_pred             ccccCCCCcceeCCCHHHHHHHHHHHHhcCCCCCcCeeeecccccCCchhhhhhhccC---CceEEEEeccccccCCCCC
Confidence            4566899999999999999999999999999999999999999999999999886544   3699999999999999999


Q ss_pred             ccccccCCeeeecCCCceeecCCeeEEEEEEEEEeecCCCCCCCcCeEEEEEEeCCCCCCC-------CCCcceEEEEEE
Q 018596           82 TNRATTAGFWKATGRDKAIYSKHDLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLETDENGT-------PQEEGWVVCRVF  154 (353)
Q Consensus        82 ~nRatg~G~WK~tG~~k~I~~~g~~IG~KKtLvFy~gr~p~g~KT~WiMhEYrL~~~~~~~-------~~~~~~VLCRIf  154 (353)
                      +||+|++||||+||++++|..+|.+||+||+|+||.|++|++.||+|+||||+|.......       ...++|||||||
T Consensus        87 ~nR~t~~G~WkatG~dk~I~~~g~~vG~KktLvFy~g~~p~g~kT~WvMhEY~L~~~~~~~~~~~~~~~~~~~wVlCrvf  166 (174)
T 3ulx_A           87 PNRAAGNGYWKATGADKPVAPRGRTLGIKKALVFYAGKAPRGVKTDWIMHEYRLADAGRAAAGAKKGSLRLDDWVLCRLY  166 (174)
T ss_dssp             SCEEETTEEEEECSCCEEECCSSSCCEEEEEEEEEESSTTSCEEEEEEEEEEEECSCC-----------CCSSEEEEEEE
T ss_pred             ceeecCCceEccCCCCcEEeeCCcEEEEEEEEEEecCCCCCCCcCCeEEEEEEeCCCCCcccccccCCCCCCCEEEEEEE
Confidence            9999999999999999999998999999999999999999999999999999998764221       245799999999


Q ss_pred             eecC
Q 018596          155 KKRI  158 (353)
Q Consensus       155 kK~~  158 (353)
                      +|+.
T Consensus       167 ~K~~  170 (174)
T 3ulx_A          167 NKKN  170 (174)
T ss_dssp             ESCC
T ss_pred             EcCC
Confidence            9875

>1ut7_A No apical meristem protein; transcription regulation, transcription, transcription factor, DNA binding, abscisic acid response, NAC domain; 1.9A {Arabidopsis thaliana} SCOP: b.143.1.1 PDB: 1ut4_A 4dul_A 3swp_A 3swm_A

Probab=100.00  E-value=6.9e-56  Score=397.44  Aligned_cols=154  Identities=48%  Similarity=1.003  Sum_probs=131.1

Q ss_pred             CCCCCCCCceECCChHHHHHHHHHHHHhCCCCCCCceeeccCCCCCCCchhhhhhcCCCCCceEEEEecCCCCCCCCCcc
Q 018596            3 AFSHVPPGFRFHPTDEELVDYYLRKKITSRRIDLDVIKDVDLYKIEPWDLQELCRIGTEEQNEWYFFSHKDKKYPTGTRT   82 (353)
Q Consensus         3 ~~s~LPPGfRF~PTDeELV~~YLr~Kv~g~~l~~~vI~evDVY~~ePWdL~~~~~~g~~~~~eWYFFs~r~kK~~~G~R~   82 (353)
                      ....|||||||||||||||.|||++|+.|.+++.++|+++|||++|||+|++.+..|   +++|||||++++||++|.|+
T Consensus        13 ~~~~lPpGfRF~PTDeELv~~YL~~K~~g~~~~~~~I~e~Diy~~~Pw~Lp~~~~~g---~~ewyFFs~r~~k~~~g~R~   89 (171)
T 1ut7_A           13 TQLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFG---EKEWYFFSPRDRKYPNGSRP   89 (171)
T ss_dssp             CSSCCCTTEEECCCHHHHHHHTHHHHHTTCCCSSCCSEECCGGGSCGGGHHHHSSSC---SSEEEEEEECCC-------C
T ss_pred             cccCCCCcceeCCChHHHHHHHHHHHhcCCCCCCCeEeecccccCChhHhhchhhcC---CccEEEEeccccccCCCCcc
Confidence            346899999999999999999999999999999999999999999999999986543   47999999999999999999


Q ss_pred             cccccCCeeeecCCCceeecCCeeEEEEEEEEEeecCCCCCCCcCeEEEEEEeCCCCC--CCCCCcceEEEEEEeecCc
Q 018596           83 NRATTAGFWKATGRDKAIYSKHDLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLETDEN--GTPQEEGWVVCRVFKKRIT  159 (353)
Q Consensus        83 nRatg~G~WK~tG~~k~I~~~g~~IG~KKtLvFy~gr~p~g~KT~WiMhEYrL~~~~~--~~~~~~~~VLCRIfkK~~~  159 (353)
                      +|+|++||||+||++++|..++.+||+||+|+||+|++|++.||+|+||||+|.....  +....++|||||||+|+..
T Consensus        90 ~R~t~~G~Wk~tG~~k~I~~~~~~vG~KktLvFy~g~~p~g~kT~WvMhEY~l~~~~~~~~~~~~~~~VlCrv~~k~~~  168 (171)
T 1ut7_A           90 NRVAGSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAPKGTKTNWIMHEYRLIEPSRRNGSTKLDDWVLCRIYKKQSS  168 (171)
T ss_dssp             CEEETTEEEEEEEEEEEEEETTEEEEEEEEEEEEESSTTSCEEEEEEEEEEEECCCC--------CCEEEEEEEECC--
T ss_pred             cccCCCCEEeccCCCceEEecCcEEEEEEEEEEEcCcCCCCCcCCeEEEEEEcCCCccccCcccCCCEEEEEEEEcCCC
Confidence            9999999999999999999989999999999999999999999999999999987642  1234689999999999764

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	353
d1ut7a_	166	b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mou	4e-69

>d1ut7a_ b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 166

class: All beta proteins
fold: NAC domain
superfamily: NAC domain
family: NAC domain
domain: No apical meristem (NAM, ANAC)
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  212 bits (540), Expect = 4e-69
 Identities = 75/152 (49%), Positives = 104/152 (68%), Gaps = 5/152 (3%)

Query: 8   PPGFRFHPTDEELVDYYLRKKITSRRIDLDVIKDVDLYKIEPWDLQELCRIGTEEQNEWY 67
           PPGFRF+PTDEEL+  YL +K       L +I ++DLYK +PW L      G   + EWY
Sbjct: 18  PPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFG---EKEWY 74

Query: 68  FFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIYSKHDLIGMRKTLVFYKGRAPNGQKSD 127
           FFS +D+KYP G+R NR   +G+WKATG DK I ++   +G++K LVFY G+AP G K++
Sbjct: 75  FFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAPKGTKTN 134

Query: 128 WIMHEYRL--ETDENGTPQEEGWVVCRVFKKR 157
           WIMHEYRL   +  NG+ + + WV+CR++KK+
Sbjct: 135 WIMHEYRLIEPSRRNGSTKLDDWVLCRIYKKQ 166

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	353
d1ut7a_	166	No apical meristem (NAM, ANAC) {Mouse-ear cress (A	100.0

>d1ut7a_ b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All beta proteins
fold: NAC domain
superfamily: NAC domain
family: NAC domain
domain: No apical meristem (NAM, ANAC)
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=2.9e-52  Score=369.00  Aligned_cols=151  Identities=49%  Similarity=1.023  Sum_probs=128.8

Q ss_pred             CCCCCCCceECCChHHHHHHHHHHHHhCCCCCCCceeeccCCCCCCCchhhhhhcCCCCCceEEEEecCCCCCCCCCccc
Q 018596            4 FSHVPPGFRFHPTDEELVDYYLRKKITSRRIDLDVIKDVDLYKIEPWDLQELCRIGTEEQNEWYFFSHKDKKYPTGTRTN   83 (353)
Q Consensus         4 ~s~LPPGfRF~PTDeELV~~YLr~Kv~g~~l~~~vI~evDVY~~ePWdL~~~~~~g~~~~~eWYFFs~r~kK~~~G~R~n   83 (353)
                      ..+|||||||+|||||||.+||++|+.|.+++.++|+++|||++|||+|++....+   +++||||+++.+++++|.|.+
T Consensus        14 ~l~LPpG~RF~PTDeELv~~YL~~Ki~g~~l~~~~I~~~Dvy~~~Pw~Lp~~~~~~---~~~wyFft~~~~k~~~g~r~~   90 (166)
T d1ut7a_          14 QLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFG---EKEWYFFSPRDRKYPNGSRPN   90 (166)
T ss_dssp             SSCCCTTEEECCCHHHHHHHTHHHHHTTCCCSSCCSEECCGGGSCGGGHHHHSSSC---SSEEEEEEECCC-------CC
T ss_pred             cccCCCccccCCCcHHHHHHHHHHHHcCCCCCcccceeccCCcCChhhccchhccC---cceEEEEeeeccccCCCCccc
Confidence            45899999999999999999999999999999999999999999999999875433   468999999999999999999


Q ss_pred             ccccCCeeeecCCCceeecCCeeEEEEEEEEEeecCCCCCCCcCeEEEEEEeCCCCC--CCCCCcceEEEEEEeec
Q 018596           84 RATTAGFWKATGRDKAIYSKHDLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLETDEN--GTPQEEGWVVCRVFKKR  157 (353)
Q Consensus        84 Ratg~G~WK~tG~~k~I~~~g~~IG~KKtLvFy~gr~p~g~KT~WiMhEYrL~~~~~--~~~~~~~~VLCRIfkK~  157 (353)
                      |++++|+||++|++++|.++|.+||+||+|+||+++.+++.+|+|+||||+|.....  +....++|||||||+|+
T Consensus        91 R~~g~G~Wk~~g~~~~i~~~g~~vG~kk~l~fy~~~~~~~~~t~W~M~EY~l~~~~~~~~~~~~~~~VLCrI~~Kk  166 (166)
T d1ut7a_          91 RVAGSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAPKGTKTNWIMHEYRLIEPSRRNGSTKLDDWVLCRIYKKQ  166 (166)
T ss_dssp             EEETTEEEEEEEEEEEEEETTEEEEEEEEEEEEESSTTSCEEEEEEEEEEEECCCC--------CCEEEEEEEECC
T ss_pred             cccCCCEecccCCCceEecCCcEEEEEEEEEEEecCCCCCCccCeEEEEEecCCcccccCccccCCEEEEEEEecC
Confidence            999999999999999999999999999999999999999999999999999987542  23345789999999985