Citrus Sinensis ID: 018651


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350--
MSLGAAEDDSASEIHIPAEIDWHMLDKSKFFFLGAALFSGVSAALYPIVVLKTRQQVLSTPISSFKMSFQIMCYEGFKGFYRGFGTSLMGTIPARALYMTALEITKSNVGTATVRLGFSDTTATTIANAAAGLSSAMAAQLIWTPVDVVSQRLMVQGYSKNNSKTIVPNVSSCRYSNGLDAFRKILVADGPRGLYRGFGISILAYAPSNAVWWASYSVANRLIWGGFGCHISQKDENSASSGCTSYKPNSKAVVAVQTLSAAMASGVSALITMPLDTIKTRLQVLDAEEKGQRRPLTVLQTVRNLVKEGGFAACYRGLGPRWASMSMSATTMITTYEFLKRHSTKSQESLRS
ccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHccccHHHHHHHHccccccccHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHEEccHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHccccccccHHHHHHHcccHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHccccccccccccccHHHHHHHHHHHHcHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccc
ccccccHHHHccccEccccccHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHcccccHHHHHHHHHHHccccEEEcccHHHHHHHcHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHccccccccccccccccHcccHHHHHHHHHHHcccHEEHcccHHHHHHHcHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHccccccccHccHHHHHHHHHHHHcccHHEHccccHHHHHHcHHHHHHHHHHHHHHHHHccccccccc
mslgaaeddsaseihipaeidwhmldkskffFLGAALFSGVSAALYPIVVLKTRQQVLSTPISSFKMSFQIMCYEGFKGFYRGFGTSLMGTIPARALYMTALEITksnvgtatvrlgfsdttATTIANAAAGLSSAMAAQLIWTPVDVVSQRLMVqgysknnsktivpnvsscrysnGLDAFRKILVadgprglyrgFGISILAYAPSNAVWWASYSVANRLIwggfgchisqkdensassgctsykpnskAVVAVQTLSAAMASGVSALITMPLDTIKTRLQVLDaeekgqrrplTVLQTVRNLVKEGgfaacyrglgprwasmSMSATTMITTYEFLKrhstksqeslrs
mslgaaeddsaseiHIPAEIDWHMLDKSKFFFLGAALFSGVSAALYPIVVLKTRQQVLSTPISSFKMSFQIMCYEGFKGFYRGFGTSLMGTIPARALYMTALEITKSNVGTATVRLGFSDTTATTIANAAAGLSSAMAAQLIWTPVDVVSQRLMVQGysknnsktivpnvsSCRYSNGLDAFRKILVADGPRGLYRGFGISILAYAPSNAVWWASYSVANRLIWGGFGCHISQKDENSASSGCTSYKPNSKAVVAVQTLSAAMASGVSALITMPLDTIKTRLQVLdaeekgqrrpltvlqTVRNLVKEGGFAACYRGLGPRWASMSMSATTMITTYEFlkrhstksqeslrs
MSLGAAEDDSASEIHIPAEIDWHMLDKSKFFFLGAALFSGVSAALYPIVVLKTRQQVLSTPISSFKMSFQIMCYEGFKGFYRGFGTSLMGTIPARALYMTALEITKSNVGTATVRLGFSDttattianaaaglssamaaQLIWTPVDVVSQRLMVQGYSKNNSKTIVPNVSSCRYSNGLDAFRKILVADGPRGLYRGFGISILAYAPSNAVWWASYSVANRLIWGGFGCHISQKDENSASSGCTSYKPNSKAVVAVQTLSAAMASGVSALITMPLDTIKTRLQVLDAEEKGQRRPLTVLQTVRNLVKEGGFAACYRGLGPRWasmsmsattmittYEFLKRHSTKSQESLRS
*************IHIPAEIDWHMLDKSKFFFLGAALFSGVSAALYPIVVLKTRQQVLSTPISSFKMSFQIMCYEGFKGFYRGFGTSLMGTIPARALYMTALEITKSNVGTATVRLGFSDTTATTIANAAAGLSSAMAAQLIWTPVDVVSQRLMVQGYSKNNSKTIVPNVSSCRYSNGLDAFRKILVADGPRGLYRGFGISILAYAPSNAVWWASYSVANRLIWGGFGCHIS*******************AVVAVQTLSAAMASGVSALITMPLDTIKTRLQVLDAEEKGQRRPLTVLQTVRNLVKEGGFAACYRGLGPRWASMSMSATTMITTYEFL*************
**********************HMLDKSKFFFLGAALFSGVSAALYPIVVLKTRQQVLS***SSFKMSFQIMCYEGFKGFYRGFGTSLMGTIPARALYMTALEITKSNVGTATV*****DTTATTIANAAAGLSSAMAAQLIWTPVDVVSQRLMVQG***************CRYSNGLDAFRKILVADGPRGLYRGFGISILAYAPSNAVWWASYSVANRLIWGGFGCHISQKDE*********YKPNSKAVVAVQTLSAAMASGVSALITMPLDTIKTR****************VLQTVRNLVKEGGFAACYRGLGPRWASMSMSATTMITTYEFLKR***********
**********ASEIHIPAEIDWHMLDKSKFFFLGAALFSGVSAALYPIVVLKTRQQVLSTPISSFKMSFQIMCYEGFKGFYRGFGTSLMGTIPARALYMTALEITKSNVGTATVRLGFSDTTATTIANAAAGLSSAMAAQLIWTPVDVVSQRLMVQGYSKNNSKTIVPNVSSCRYSNGLDAFRKILVADGPRGLYRGFGISILAYAPSNAVWWASYSVANRLIWGGFGCHISQ************YKPNSKAVVAVQTLSAAMASGVSALITMPLDTIKTRLQVLDAEEKGQRRPLTVLQTVRNLVKEGGFAACYRGLGPRWASMSMSATTMITTYEFL*************
****AAEDDSASEIHIPAEIDWHMLDKSKFFFLGAALFSGVSAALYPIVVLKTRQQVLSTPISSFKMSFQIMCYEGFKGFYRGFGTSLMGTIPARALYMTALEITKSNVGTATVRLGFSDTTATTIANAAAGLSSAMAAQLIWTPVDVVSQRLMVQGYSK************CRYSNGLDAFRKILVADGPRGLYRGFGISILAYAPSNAVWWASYSVANRLIWGGFG********NSASSGCTSYKPNSKAVVAVQTLSAAMASGVSALITMPLDTIKTRLQVLDAEEKGQRRPLTVLQTVRNLVKEGGFAACYRGLGPRWASMSMSATTMITTYEFLKRHSTKS******
ooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MSLGAAEDDSASEIHIPAEIDWHMLDKSKFFFLGAALFSGVSAALYPIVVLKTRQQVLSTPISSFKMSFQIMCYEGFKGFYRGFGTSLMGTIPARALYMTALEITKSNVGTATVRLGFSDTTATTIANAAAGLSSAMAAQLIWTPVDVVSQRLMVQGYSKNNSKTIVPNVSSCRYSNGLDAFRKILVADGPRGLYRGFGISILAYAPSNAVWWASYSVANRLIWGGFGCHISQKDENSASSGCTSYKPNSKAVVAVQTLSAAMASGVSALITMPLDTIKTRLQVLDAEEKGQRRPLTVLQTVRNLVKEGGFAACYRGLGPRWASMSMSATTMITTYEFLKRHSTKSQESLRS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query352 2.2.26 [Sep-21-2011]
Q96H78314 Solute carrier family 25 yes no 0.823 0.923 0.300 8e-32
Q5RD67314 Solute carrier family 25 yes no 0.823 0.923 0.300 8e-32
Q8BGF9314 Solute carrier family 25 yes no 0.823 0.923 0.303 1e-31
Q54VX4345 Mitochondrial substrate c yes no 0.894 0.913 0.269 5e-27
Q55E45303 Mitochondrial substrate c no no 0.758 0.881 0.296 3e-23
Q552L9366 Mitochondrial substrate c no no 0.789 0.759 0.269 6e-20
Q12482902 Mitochondrial aspartate-g yes no 0.732 0.286 0.262 2e-18
Q5RBC8678 Calcium-binding mitochond no no 0.772 0.401 0.286 1e-17
O75746678 Calcium-binding mitochond no no 0.772 0.401 0.286 1e-17
Q8BH59677 Calcium-binding mitochond no no 0.772 0.401 0.283 1e-17
>sp|Q96H78|S2544_HUMAN Solute carrier family 25 member 44 OS=Homo sapiens GN=SLC25A44 PE=2 SV=1 Back     alignment and function desciption
 Score =  138 bits (347), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 101/336 (30%), Positives = 161/336 (47%), Gaps = 46/336 (13%)

Query: 20  IDWHMLDKSKFFFLGAALFSGVSAALYPIVVLKTRQQVL---STPISSFKMSFQIMCYEG 76
           I+W  LDK KF+  G A+   +  ++YP  +++TR QV    S    +F    +I+  +G
Sbjct: 10  IEWEHLDKKKFYVFGVAMTMMIRVSVYPFTLIRTRLQVQKGKSLYHGTFDAFIKILRADG 69

Query: 77  FKGFYRGFGTSLMGTIPARALYMTALEITKSNVGTATVRLGFSDTTATTIANAAAGLSSA 136
             G YRGF  +    I  +  Y+T  E+T+  V   +         + T+ +  AG S++
Sbjct: 70  ITGLYRGFLVNTFTLISGQC-YVTTYELTRKFVADYS--------QSNTVKSLVAGGSAS 120

Query: 137 MAAQLIWTPVDVVSQRLMVQGYSKNNSKTIVPNVSSCR----YSNGLDAFRKILVADGPR 192
           + AQ I  P+DVVSQ LM+Q   +   +  V      +    +    D  R+IL ADG R
Sbjct: 121 LVAQSITVPIDVVSQHLMMQRKGEKMGRFQVRGNPEGQGVVAFGQTKDIIRQILQADGLR 180

Query: 193 GLYRGFGISILAYAPSNAVWWASYSV-ANRLIWGGFGCHISQKDENSASSGCTSYKPNSK 251
           G YRG+  S+L Y P++AVWW  Y   A +L                 S  C    P+  
Sbjct: 181 GFYRGYVASLLTYIPNSAVWWPFYHFYAEQL-----------------SYLCPKECPH-- 221

Query: 252 AVVAVQTLSAAMASGVSALITMPLDTIKTRLQVLDAEEKGQRRPLTVLQTVRNLVKEGGF 311
             +  Q +S  +A+  ++++T P+D I+TR+QV   E K      +++ T R L+ E G 
Sbjct: 222 --IVFQAVSGPLAAATASILTNPMDVIRTRVQV---EGKN-----SIILTFRQLMAEEGP 271

Query: 312 AACYRGLGPRWASMSMSATTMITTYEFLKRHSTKSQ 347
               +GL  R  S + S   ++  YE LK+ S + +
Sbjct: 272 WGLMKGLSARIISATPSTIVIVVGYESLKKLSLRPE 307





Homo sapiens (taxid: 9606)
>sp|Q5RD67|S2544_PONAB Solute carrier family 25 member 44 OS=Pongo abelii GN=SLC25A44 PE=2 SV=2 Back     alignment and function description
>sp|Q8BGF9|S2544_MOUSE Solute carrier family 25 member 44 OS=Mus musculus GN=Slc25a44 PE=2 SV=1 Back     alignment and function description
>sp|Q54VX4|MCFJ_DICDI Mitochondrial substrate carrier family protein J OS=Dictyostelium discoideum GN=mcfJ PE=2 SV=1 Back     alignment and function description
>sp|Q55E45|MCFE_DICDI Mitochondrial substrate carrier family protein E OS=Dictyostelium discoideum GN=mcfE PE=3 SV=1 Back     alignment and function description
>sp|Q552L9|S2540_DICDI Mitochondrial substrate carrier family protein H OS=Dictyostelium discoideum GN=mcfH PE=3 SV=1 Back     alignment and function description
>sp|Q12482|AGC1_YEAST Mitochondrial aspartate-glutamate transporter AGC1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=AGC1 PE=1 SV=1 Back     alignment and function description
>sp|Q5RBC8|CMC1_PONAB Calcium-binding mitochondrial carrier protein Aralar1 OS=Pongo abelii GN=SLC25A12 PE=2 SV=1 Back     alignment and function description
>sp|O75746|CMC1_HUMAN Calcium-binding mitochondrial carrier protein Aralar1 OS=Homo sapiens GN=SLC25A12 PE=1 SV=2 Back     alignment and function description
>sp|Q8BH59|CMC1_MOUSE Calcium-binding mitochondrial carrier protein Aralar1 OS=Mus musculus GN=Slc25a12 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query352
343887302352 mitochondrial carrier protein [Citrus un 1.0 1.0 0.988 0.0
224141665356 predicted protein [Populus trichocarpa] 1.0 0.988 0.806 1e-159
255550119353 protein with unknown function [Ricinus c 0.985 0.983 0.801 1e-157
224092117356 predicted protein [Populus trichocarpa] 0.997 0.985 0.787 1e-153
449447159351 PREDICTED: solute carrier family 25 memb 0.980 0.982 0.776 1e-150
225429628342 PREDICTED: solute carrier family 25 memb 0.968 0.997 0.752 1e-146
356507054345 PREDICTED: solute carrier family 25 memb 0.977 0.997 0.730 1e-142
225442186358 PREDICTED: solute carrier family 25 memb 0.991 0.974 0.726 1e-141
357465803348 CCP-like protein [Medicago truncatula] g 0.968 0.979 0.742 1e-141
255560681343 Mitochondrial carrier protein RIM2, puta 0.971 0.997 0.724 1e-139
>gi|343887302|dbj|BAK61848.1| mitochondrial carrier protein [Citrus unshiu] Back     alignment and taxonomy information
 Score =  720 bits (1858), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 348/352 (98%), Positives = 350/352 (99%)

Query: 1   MSLGAAEDDSASEIHIPAEIDWHMLDKSKFFFLGAALFSGVSAALYPIVVLKTRQQVLST 60
           MSLGAAEDDSASEIHIPAEIDWHMLDKSKFFFLGAALFSG+SAALYPIVVLKTRQQVLST
Sbjct: 1   MSLGAAEDDSASEIHIPAEIDWHMLDKSKFFFLGAALFSGISAALYPIVVLKTRQQVLST 60

Query: 61  PISSFKMSFQIMCYEGFKGFYRGFGTSLMGTIPARALYMTALEITKSNVGTATVRLGFSD 120
           PISSFKMSFQIMCYEGFKGFYRGFG+SLMGTIPARALYMTALEITKSNVGTATVRLGFSD
Sbjct: 61  PISSFKMSFQIMCYEGFKGFYRGFGSSLMGTIPARALYMTALEITKSNVGTATVRLGFSD 120

Query: 121 TTATTIANAAAGLSSAMAAQLIWTPVDVVSQRLMVQGYSKNNSKTIVPNVSSCRYSNGLD 180
           TTATTIANAAAGLSSAMAAQLIWTPVDVVSQRLMVQGYSKNNSKTIVPNVSSCRYSNGLD
Sbjct: 121 TTATTIANAAAGLSSAMAAQLIWTPVDVVSQRLMVQGYSKNNSKTIVPNVSSCRYSNGLD 180

Query: 181 AFRKILVADGPRGLYRGFGISILAYAPSNAVWWASYSVANRLIWGGFGCHISQKDENSAS 240
           AFRKILVADGPRGLYRGFGISILAYAPSNAVWWASYSVANRLIWG FGCHISQKDENSAS
Sbjct: 181 AFRKILVADGPRGLYRGFGISILAYAPSNAVWWASYSVANRLIWGSFGCHISQKDENSAS 240

Query: 241 SGCTSYKPNSKAVVAVQTLSAAMASGVSALITMPLDTIKTRLQVLDAEEKGQRRPLTVLQ 300
           SGCT YKPNSKAVVAVQTLSAAMASGVSALITMPLDTIKTRLQVLDAEEKGQRRPLTVLQ
Sbjct: 241 SGCTGYKPNSKAVVAVQTLSAAMASGVSALITMPLDTIKTRLQVLDAEEKGQRRPLTVLQ 300

Query: 301 TVRNLVKEGGFAACYRGLGPRWASMSMSATTMITTYEFLKRHSTKSQESLRS 352
           TVRNLVKEGGFAACYRGLGPRWASMSMSATTMITTYEFLKRHSTKSQESLRS
Sbjct: 301 TVRNLVKEGGFAACYRGLGPRWASMSMSATTMITTYEFLKRHSTKSQESLRS 352




Source: Citrus unshiu

Species: Citrus unshiu

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224141665|ref|XP_002324186.1| predicted protein [Populus trichocarpa] gi|118489115|gb|ABK96364.1| unknown [Populus trichocarpa x Populus deltoides] gi|222865620|gb|EEF02751.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255550119|ref|XP_002516110.1| protein with unknown function [Ricinus communis] gi|223544596|gb|EEF46112.1| protein with unknown function [Ricinus communis] Back     alignment and taxonomy information
>gi|224092117|ref|XP_002309479.1| predicted protein [Populus trichocarpa] gi|222855455|gb|EEE93002.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449447159|ref|XP_004141336.1| PREDICTED: solute carrier family 25 member 44-like [Cucumis sativus] gi|449486701|ref|XP_004157373.1| PREDICTED: solute carrier family 25 member 44-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|225429628|ref|XP_002280811.1| PREDICTED: solute carrier family 25 member 44-like isoform 1 [Vitis vinifera] Back     alignment and taxonomy information
>gi|356507054|ref|XP_003522286.1| PREDICTED: solute carrier family 25 member 44-like [Glycine max] Back     alignment and taxonomy information
>gi|225442186|ref|XP_002276676.1| PREDICTED: solute carrier family 25 member 44-like isoform 1 [Vitis vinifera] gi|359482721|ref|XP_003632815.1| PREDICTED: solute carrier family 25 member 44-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|357465803|ref|XP_003603186.1| CCP-like protein [Medicago truncatula] gi|355492234|gb|AES73437.1| CCP-like protein [Medicago truncatula] Back     alignment and taxonomy information
>gi|255560681|ref|XP_002521354.1| Mitochondrial carrier protein RIM2, putative [Ricinus communis] gi|223539432|gb|EEF41022.1| Mitochondrial carrier protein RIM2, putative [Ricinus communis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query352
TAIR|locus:2032728349 AT1G72820 [Arabidopsis thalian 0.977 0.985 0.614 2.9e-110
TAIR|locus:2179704342 AT5G26200 [Arabidopsis thalian 0.937 0.964 0.593 2.3e-101
TAIR|locus:2143161323 AT5G15640 [Arabidopsis thalian 0.599 0.653 0.411 1.6e-40
DICTYBASE|DDB_G0280083345 mcfJ "mitochondrial substrate 0.892 0.910 0.260 9.7e-25
UNIPROTKB|F1PD97342 SLC25A44 "Uncharacterized prot 0.571 0.587 0.319 8e-21
ZFIN|ZDB-GENE-050320-89316 slc25a44b "solute carrier fami 0.534 0.594 0.320 1e-20
ZFIN|ZDB-GENE-041114-38324 slc25a44a "solute carrier fami 0.531 0.577 0.331 2.1e-20
UNIPROTKB|Q96H78314 SLC25A44 "Solute carrier famil 0.534 0.598 0.318 2.7e-20
UNIPROTKB|F1RLQ4331 SLC25A44 "Uncharacterized prot 0.571 0.607 0.315 3.5e-20
UNIPROTKB|A0JN83314 SLC25A44 "Uncharacterized prot 0.534 0.598 0.318 4.4e-20
TAIR|locus:2032728 AT1G72820 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1089 (388.4 bits), Expect = 2.9e-110, P = 2.9e-110
 Identities = 218/355 (61%), Positives = 261/355 (73%)

Query:     1 MSLGAAEDDSASEIHIPAEIDWHMLDKSKFFFLGAALFSGVSAALYPIVVLKTRQQVLST 60
             M+LGAAE++SA EIH+PA+I+W MLDKSKFF LGAALFSGVS ALYP V++KTRQQV  +
Sbjct:     1 MNLGAAEEESAQEIHLPADINWEMLDKSKFFVLGAALFSGVSGALYPAVLMKTRQQVCHS 60

Query:    61 PISSFKMSFQIMCYEGFKGFYRGFGTSLMGTIPARALYMTALEITKSNVGTATVRLGFSD 120
               S  K +F ++ +EG +G YRGFGTSLMGTIPARALYMTALE+TKSNVG+A V LG ++
Sbjct:    61 QGSCIKTAFTLVRHEGLRGLYRGFGTSLMGTIPARALYMTALEVTKSNVGSAAVSLGLTE 120

Query:   121 XXXXXXXXXXXXXXXXXXXQLIWTPVDVVSQRLMVQGYSKNNSKTIVPNVSSCRYSNGLD 180
                                QL+WTPVDVVSQRLMVQG     S  +V N S C Y NG D
Sbjct:   121 AKAAAVANAVGGLSAAMAAQLVWTPVDVVSQRLMVQG-----SAGLV-NASRCNYVNGFD 174

Query:   181 AFRKILVADGPRGLYRGFGISILAYAPSNAVWWASYSVANRLIWGGFGCHISQKDENSAS 240
             AFRKI+ ADGP+GLYRGFGISIL YAPSNAVWWASYSVA R++WGG GC++ +KDE S +
Sbjct:   175 AFRKIVRADGPKGLYRGFGISILTYAPSNAVWWASYSVAQRMVWGGIGCYVCKKDEESGN 234

Query:   241 SGCTSYKPNSKAVVAVQTLSAAMASGVSALITMPLDTIKTRLQVLDAEEK---GQRRPLT 297
             +  T+ KP+SK ++AVQ +SAA+A  VSALITMPLDTIKTRLQVLD E+    G+R P +
Sbjct:   235 NS-TTMKPDSKTIMAVQGVSAAIAGSVSALITMPLDTIKTRLQVLDGEDSSNNGKRGP-S 292

Query:   298 VLQTVRNLVKEGGFAACYRGLGPRWXXXXXXXXXXXXXYEFLKRHSTKSQESLRS 352
             + QTVRNLV+EGG+ ACYRGLGPR              YEFLKR S K+ +   S
Sbjct:   293 IGQTVRNLVREGGWTACYRGLGPRCASMSMSATTMITTYEFLKRLSAKNHDGFYS 347




GO:0005739 "mitochondrion" evidence=ISM
GO:0005743 "mitochondrial inner membrane" evidence=ISS
GO:0006810 "transport" evidence=IEA;ISS
GO:0006839 "mitochondrial transport" evidence=ISS
GO:0055085 "transmembrane transport" evidence=IEA
TAIR|locus:2179704 AT5G26200 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2143161 AT5G15640 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0280083 mcfJ "mitochondrial substrate carrier family protein" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
UNIPROTKB|F1PD97 SLC25A44 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-050320-89 slc25a44b "solute carrier family 25, member 44 b" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-041114-38 slc25a44a "solute carrier family 25, member 44 a" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|Q96H78 SLC25A44 "Solute carrier family 25 member 44" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1RLQ4 SLC25A44 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|A0JN83 SLC25A44 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q96H78S2544_HUMANNo assigned EC number0.30050.82380.9235yesno
Q8BGF9S2544_MOUSENo assigned EC number0.30350.82380.9235yesno
Q5RD67S2544_PONABNo assigned EC number0.30050.82380.9235yesno

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
eugene3.00180201
hypothetical protein (357 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query352
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 9e-19
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 2e-17
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 2e-11
PTZ00168259 PTZ00168, PTZ00168, mitochondrial carrier protein; 4e-07
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 6e-07
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 4e-04
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 0.002
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
 Score = 80.0 bits (198), Expect = 9e-19
 Identities = 28/104 (26%), Positives = 48/104 (46%), Gaps = 11/104 (10%)

Query: 122 TATTIANAAAGLSSAMAAQLIWTPVDVVSQRLMVQGYSKNNSKTIVPNVSSCRYSNGLDA 181
             + +A+  AG  +   A  +  P+DVV  RL       +            +Y   LD 
Sbjct: 2   PLSFLASLLAGGIAGAIAATVTYPLDVVKTRLQSSAAGGSR-----------KYKGILDC 50

Query: 182 FRKILVADGPRGLYRGFGISILAYAPSNAVWWASYSVANRLIWG 225
           F+KI   +G RGLY+G   ++L  AP+ A+++ +Y    +L+  
Sbjct: 51  FKKIYKEEGIRGLYKGLLPNLLRVAPAAAIYFGTYETLKKLLLK 94


Length = 96

>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
>gnl|CDD|185494 PTZ00168, PTZ00168, mitochondrial carrier protein; Provisional Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 352
KOG0752320 consensus Mitochondrial solute carrier protein [En 100.0
KOG0764299 consensus Mitochondrial FAD carrier protein [Energ 100.0
KOG0753317 consensus Mitochondrial fatty acid anion carrier p 100.0
KOG0759286 consensus Mitochondrial oxoglutarate/malate carrie 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0758297 consensus Mitochondrial carnitine-acylcarnitine ca 100.0
KOG0760302 consensus Mitochondrial carrier protein MRS3/4 [En 100.0
KOG0757319 consensus Mitochondrial carrier protein - Rim2p/Mr 100.0
KOG0754294 consensus Mitochondrial oxodicarboxylate carrier p 100.0
PTZ00168259 mitochondrial carrier protein; Provisional 100.0
KOG0762311 consensus Mitochondrial carrier protein [Energy pr 100.0
KOG0761361 consensus Mitochondrial carrier protein CGI-69 [En 100.0
KOG0765333 consensus Predicted mitochondrial carrier protein 100.0
KOG0751694 consensus Mitochondrial aspartate/glutamate carrie 100.0
KOG0749298 consensus Mitochondrial ADP/ATP carrier proteins [ 100.0
KOG0768323 consensus Mitochondrial carrier protein PET8 [Ener 100.0
KOG0036463 consensus Predicted mitochondrial carrier protein 100.0
KOG0766297 consensus Predicted mitochondrial carrier protein 100.0
KOG0770353 consensus Predicted mitochondrial carrier protein 100.0
KOG0755320 consensus Mitochondrial oxaloacetate carrier prote 100.0
KOG0756299 consensus Mitochondrial tricarboxylate/dicarboxyla 100.0
KOG0750304 consensus Mitochondrial solute carrier protein [En 100.0
KOG0763301 consensus Mitochondrial ornithine transporter [Ene 100.0
KOG0769308 consensus Predicted mitochondrial carrier protein 100.0
KOG0767333 consensus Mitochondrial phosphate carrier protein 100.0
KOG0764299 consensus Mitochondrial FAD carrier protein [Energ 100.0
KOG0752320 consensus Mitochondrial solute carrier protein [En 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0757319 consensus Mitochondrial carrier protein - Rim2p/Mr 100.0
KOG0753317 consensus Mitochondrial fatty acid anion carrier p 99.97
KOG0760302 consensus Mitochondrial carrier protein MRS3/4 [En 99.97
KOG0758297 consensus Mitochondrial carnitine-acylcarnitine ca 99.97
KOG0768323 consensus Mitochondrial carrier protein PET8 [Ener 99.97
KOG0762311 consensus Mitochondrial carrier protein [Energy pr 99.97
PTZ00168259 mitochondrial carrier protein; Provisional 99.97
KOG0754294 consensus Mitochondrial oxodicarboxylate carrier p 99.96
KOG0759286 consensus Mitochondrial oxoglutarate/malate carrie 99.95
KOG0770 353 consensus Predicted mitochondrial carrier protein 99.94
KOG0761 361 consensus Mitochondrial carrier protein CGI-69 [En 99.94
KOG0751694 consensus Mitochondrial aspartate/glutamate carrie 99.94
KOG0769 308 consensus Predicted mitochondrial carrier protein 99.93
KOG0755320 consensus Mitochondrial oxaloacetate carrier prote 99.93
KOG0750304 consensus Mitochondrial solute carrier protein [En 99.93
KOG0036463 consensus Predicted mitochondrial carrier protein 99.92
KOG0767 333 consensus Mitochondrial phosphate carrier protein 99.92
KOG0765333 consensus Predicted mitochondrial carrier protein 99.92
KOG1519297 consensus Predicted mitochondrial carrier protein 99.92
KOG0749298 consensus Mitochondrial ADP/ATP carrier proteins [ 99.91
KOG2745321 consensus Mitochondrial carrier protein [General f 99.91
KOG0756299 consensus Mitochondrial tricarboxylate/dicarboxyla 99.91
KOG0766297 consensus Predicted mitochondrial carrier protein 99.91
KOG0763301 consensus Mitochondrial ornithine transporter [Ene 99.9
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.78
KOG2954427 consensus Mitochondrial carrier protein [General f 99.76
KOG2745321 consensus Mitochondrial carrier protein [General f 99.72
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.66
KOG1519297 consensus Predicted mitochondrial carrier protein 99.61
KOG2954427 consensus Mitochondrial carrier protein [General f 98.57
>KOG0752 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
Probab=100.00  E-value=3.9e-57  Score=393.39  Aligned_cols=283  Identities=28%  Similarity=0.375  Sum_probs=249.0

Q ss_pred             chHHHHHHHhHHHHhHhhhhccHHHHHHHHHhCCC------CCCHHHHHHHHHHhhcccccccchhHhhhcchhhhHHHH
Q 018651           26 DKSKFFFLGAALFSGVSAALYPIVVLKTRQQVLST------PISSFKMSFQIMCYEGFKGFYRGFGTSLMGTIPARALYM   99 (352)
Q Consensus        26 ~~~~~~~~g~~a~~~~~~~~~Pld~ik~~~q~~~~------~~~~~~~~~~i~~~~G~~~ly~G~~~~l~~~~~~~~~~~   99 (352)
                      .....+++|++||+++.+++.|||++|+|+|++.+      ..+..+.+++|+++||++|||||..++.++.+|+.++.|
T Consensus        26 ~~~~~llAGgvAGavsrt~~APLd~iKIlfQ~~~~~~~~~k~~g~~~~~~~I~~eEG~~g~wkGn~~~~~r~~pY~avqf  105 (320)
T KOG0752|consen   26 TGAKSLLAGGVAGAVSRTVTAPLDRIKILFQVQVEPSKTSKYPGVIQAFKSIYREEGLRGFWKGNGPAQIRIIPYGAVQF  105 (320)
T ss_pred             HHHHHHhcchHHHHHHHHhcCchhHceEEEEeccccccccccccHHHHHHHHHHHhchhhhhcCcccceeeeeecchhhh
Confidence            66678999999999999999999999999999973      267899999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhcccccccCCCCchhhHHHHHHHHHHHHHHHHhhhchHHHHHHHHHhhcCCCCCCcccccCCCCCCCCcHH
Q 018651          100 TALEITKSNVGTATVRLGFSDTTATTIANAAAGLSSAMAAQLIWTPVDVVSQRLMVQGYSKNNSKTIVPNVSSCRYSNGL  179 (352)
Q Consensus       100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~i~~Pld~ik~r~q~~~~~~~~~~~~~~~~~~~~~~~~~  179 (352)
                      ..||.+++.+....     +....++...++||++||+++.+++||+|++|+|+..+...             ..|+++.
T Consensus       106 ~aye~~k~~~~~~~-----~~~~~~~~~~l~aGalAG~~a~~~tyPLDlvRtRLa~q~~~-------------~~y~~l~  167 (320)
T KOG0752|consen  106 SAYEQYKKLVLGVD-----PNGSLSPLVRLVAGALAGMTATLATYPLDLLRTRLAVQGEL-------------KVYRGLL  167 (320)
T ss_pred             hHHHHhhhhhhccC-----cccccchhHHHHHHHHHHHHHHHhcCcHHHhhhheeeeccc-------------ccCCcHH
Confidence            99999998643321     22266788999999999999999999999999999888742             2699999


Q ss_pred             HHHHHHHHhcCccccccchhHHHHhhhccchhHHHHHHHHHHHHhhccCCCCCcccccccCCCCCCCCCCCcchHHHHHH
Q 018651          180 DAFRKILVADGPRGLYRGFGISILAYAPSNAVWWASYSVANRLIWGGFGCHISQKDENSASSGCTSYKPNSKAVVAVQTL  259 (352)
Q Consensus       180 ~~~~~i~~~~G~~glyrG~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (352)
                      ++++.||++||++|||||+.+++++.+|+.++.|.+||.++.+.+...                   ..+.....+..++
T Consensus       168 ~a~~~I~~~eGi~gfYrGl~ptllgi~Pyag~~F~~Yd~lk~~~~~~~-------------------~~~~~~~~~~~l~  228 (320)
T KOG0752|consen  168 HAFKTIYREEGIRGFYRGLGPTLLGIAPYAGINFFAYDTLKKWQYLKS-------------------SGNKELSNFERLL  228 (320)
T ss_pred             HHHHHHHHhcchhhhhcCcchhhheehhhhhhHHHHHHHHHHhhcccc-------------------cccchhhhHHHHH
Confidence            999999999999999999999999999999999999999999621111                   0112344678999


Q ss_pred             HHHHHHHhHHhhcchHHHHHHHHhhcccc--ccCCCCCCcHHHHHHHHHHhhchhhhhcchhhhhhhhhcchhhhHhhHH
Q 018651          260 SAAMASGVSALITMPLDTIKTRLQVLDAE--EKGQRRPLTVLQTVRNLVKEGGFAACYRGLGPRWASMSMSATTMITTYE  337 (352)
Q Consensus       260 ~g~~ag~~~~~it~Pld~ik~r~q~~~~~--~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~~~~~~~~~~~~~~~~~  337 (352)
                      +|++||+++.+++||||+||+|||+....  ....+++ +++||+++|+++||+.|||||+.|++++.+|+.+++|++||
T Consensus       229 ~GalAG~~aqti~yPlD~vRrrmQ~~~~~~~~~~~~~~-~~~~~~~~i~~~EG~~gLYkGl~p~~lK~~P~~ai~F~~Ye  307 (320)
T KOG0752|consen  229 CGALAGAVAQTITYPLDTVRRRMQLGGLKYFGGGFRYK-GVLDAFRQIVKTEGVKGLYKGLSPNLLKVVPSVAISFTTYE  307 (320)
T ss_pred             HHHHHHHHHhhhcccHHHHHHHHhccCccccccccccc-cHHHHHHHHHHHhhhhhhhccccHHHHHhcccceeeeehHH
Confidence            99999999999999999999999999864  2234456 99999999999999999999999999999999999999999


Q ss_pred             HHHHHhhhh
Q 018651          338 FLKRHSTKS  346 (352)
Q Consensus       338 ~~~~~~~~~  346 (352)
                      .+|+++.-.
T Consensus       308 ~~k~~l~~~  316 (320)
T KOG0752|consen  308 ILKDLLRLL  316 (320)
T ss_pred             HHHHHhhcc
Confidence            999776543



>KOG0764 consensus Mitochondrial FAD carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0753 consensus Mitochondrial fatty acid anion carrier protein/Uncoupling protein [Energy production and conversion] Back     alignment and domain information
>KOG0759 consensus Mitochondrial oxoglutarate/malate carrier proteins [Energy production and conversion] Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0758 consensus Mitochondrial carnitine-acylcarnitine carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0760 consensus Mitochondrial carrier protein MRS3/4 [Energy production and conversion] Back     alignment and domain information
>KOG0757 consensus Mitochondrial carrier protein - Rim2p/Mrs12p [Energy production and conversion] Back     alignment and domain information
>KOG0754 consensus Mitochondrial oxodicarboxylate carrier protein [Energy production and conversion] Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0762 consensus Mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0761 consensus Mitochondrial carrier protein CGI-69 [Energy production and conversion] Back     alignment and domain information
>KOG0765 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion] Back     alignment and domain information
>KOG0749 consensus Mitochondrial ADP/ATP carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0768 consensus Mitochondrial carrier protein PET8 [Energy production and conversion] Back     alignment and domain information
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG0766 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0770 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0755 consensus Mitochondrial oxaloacetate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0756 consensus Mitochondrial tricarboxylate/dicarboxylate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0750 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0763 consensus Mitochondrial ornithine transporter [Energy production and conversion] Back     alignment and domain information
>KOG0769 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0767 consensus Mitochondrial phosphate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0764 consensus Mitochondrial FAD carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0752 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0757 consensus Mitochondrial carrier protein - Rim2p/Mrs12p [Energy production and conversion] Back     alignment and domain information
>KOG0753 consensus Mitochondrial fatty acid anion carrier protein/Uncoupling protein [Energy production and conversion] Back     alignment and domain information
>KOG0760 consensus Mitochondrial carrier protein MRS3/4 [Energy production and conversion] Back     alignment and domain information
>KOG0758 consensus Mitochondrial carnitine-acylcarnitine carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0768 consensus Mitochondrial carrier protein PET8 [Energy production and conversion] Back     alignment and domain information
>KOG0762 consensus Mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0754 consensus Mitochondrial oxodicarboxylate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0759 consensus Mitochondrial oxoglutarate/malate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0770 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0761 consensus Mitochondrial carrier protein CGI-69 [Energy production and conversion] Back     alignment and domain information
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion] Back     alignment and domain information
>KOG0769 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0755 consensus Mitochondrial oxaloacetate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0750 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG0767 consensus Mitochondrial phosphate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0765 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG1519 consensus Predicted mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG0749 consensus Mitochondrial ADP/ATP carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG2745 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG0756 consensus Mitochondrial tricarboxylate/dicarboxylate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0766 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0763 consensus Mitochondrial ornithine transporter [Energy production and conversion] Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>KOG2954 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2745 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>KOG1519 consensus Predicted mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2954 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query352
2lck_A 303 Structure Of The Mitochondrial Uncoupling Protein 2 6e-05
1okc_A297 Structure Of Mitochondrial AdpATP CARRIER IN COMPLE 6e-04
>pdb|2LCK|A Chain A, Structure Of The Mitochondrial Uncoupling Protein 2 Determined By Nmr Molecular Fragment Replacement Length = 303 Back     alignment and structure

Iteration: 1

Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 43/200 (21%), Positives = 76/200 (38%), Gaps = 27/200 (13%) Query: 141 LIWTPVDVVSQRLMVQGYSKNNSKTIVPNVSSCRYSNGLDAFRKILVADGPRGLYRGFGI 200 LI P+D RL +QG S+ +V +S +Y L ++ +GPR LY G Sbjct: 17 LITFPLDTAKVRLQIQG----ESQGLVRTAASAQYRGVLGTILTMVRTEGPRSLYNG--- 69 Query: 201 SILAYAPSNAVWWASYSVANRLIWGGFGCHISQKDENSASSGCTSYKPNSKAVVAVQTLS 260 L + +AS + G + S K + K + A + + L+ Sbjct: 70 --LVAGLQRQMSFASVRI---------GLYDSVKQFYT--------KGSEHAGIGSRLLA 110 Query: 261 AAMASGVSALITMPLDTIKTRLQVLDAEEKGQRRPLTVLQTVRNLVKEGGFAACYRGLGP 320 + ++ + P D +K R Q A G RR + ++ + + +E G ++G P Sbjct: 111 GSTTGALAVAVAQPTDVVKVRFQA-QARAGGGRRYQSTVEAYKTIAREEGIRGLWKGTSP 169 Query: 321 RWXXXXXXXXXXXXXYEFLK 340 Y+ +K Sbjct: 170 NVARNAIVNCAELVTYDLIK 189
>pdb|1OKC|A Chain A, Structure Of Mitochondrial AdpATP CARRIER IN COMPLEX WITH Carboxyatractyloside Length = 297 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query352
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 2e-35
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 4e-25
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 1e-31
2lck_A 303 Mitochondrial uncoupling protein 2; membrane prote 8e-13
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 8e-07
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
 Score =  130 bits (328), Expect = 2e-35
 Identities = 58/327 (17%), Positives = 106/327 (32%), Gaps = 54/327 (16%)

Query: 29  KFFFLGAALFSGVSA--ALYPIVVLKTRQQVLSTP------------ISSFKMSFQIMCY 74
           K F  G    +   +  A+ PI  +K   QV                I       +I   
Sbjct: 9   KDFLAGG--VAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVV---RIPKE 63

Query: 75  EGFKGFYRGFGTSLMGTIPARALYMTALEITKSNVGTATVRLGFSDTTATTIANAAAGLS 134
           +GF  F+RG   +++   P +AL     +  K        R            N A+G +
Sbjct: 64  QGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRH--KQFWRYFAGNLASGGA 121

Query: 135 SAMAAQLIWTPVDVVSQRLMVQGYSKNNSKTIVPNVSSCRYSNGLDAFRKILVADGPRGL 194
           +   +     P+D    RL          +          ++   +   KI  +DG RGL
Sbjct: 122 AGATSLCFVYPLDFARTRLAADVGKGAAQR---------EFTGLGNCITKIFKSDGLRGL 172

Query: 195 YRGFGISILAYAPSNAVWWASYSVANRLIWGGFGCHISQKDENSASSGCTSYKPNSKAVV 254
           Y+GF +S+       A ++  Y  A  +                               +
Sbjct: 173 YQGFNVSVQGIIIYRAAYFGVYDTAKGM-----------------------LPDPKNVHI 209

Query: 255 AVQTLSAAMASGVSALITMPLDTIKTRLQVLDAEEKGQRRPLTVLQTVRNLVKEGGFAAC 314
            V  + A   + V+ L++ P DT++ R+ +    +         +   R + K+ G  A 
Sbjct: 210 IVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQSGRKGADIMYTGTVDCWRKIAKDEGPKAF 269

Query: 315 YRGLGPRWASMSMSATTMITTYEFLKR 341
           ++G           A   +  Y+ +K+
Sbjct: 270 FKGAWSNVLRGMGGAFV-LVLYDEIKK 295


>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query352
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 100.0
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
2lck_A 303 Mitochondrial uncoupling protein 2; membrane prote 100.0
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
Probab=100.00  E-value=4.5e-54  Score=386.33  Aligned_cols=283  Identities=20%  Similarity=0.261  Sum_probs=239.1

Q ss_pred             CchHHHHHHHhHHHHhHhhhhccHHHHHHHHHhCCC---------CCCHHHHHHHHHHhhcccccccchhHhhhcchhhh
Q 018651           25 LDKSKFFFLGAALFSGVSAALYPIVVLKTRQQVLST---------PISSFKMSFQIMCYEGFKGFYRGFGTSLMGTIPAR   95 (352)
Q Consensus        25 ~~~~~~~~~g~~a~~~~~~~~~Pld~ik~~~q~~~~---------~~~~~~~~~~i~~~~G~~~ly~G~~~~l~~~~~~~   95 (352)
                      ++....+++|+++++++.+++||||++|+|+|++..         ..+.++++++|+++||++|||||+.+++++.++..
T Consensus         5 ~~~~~~~~aG~~ag~~~~~~~~Pld~vKtrlQ~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~~   84 (297)
T 1okc_A            5 LSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQ   84 (297)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHGGGCSSCCGGGSCCSHHHHHHHHHHHHCGGGGGTTTHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHhcccccccccccccccHHHHHHHHHhccchhheecccHHHHHHHHHHH
Confidence            455678999999999999999999999999998752         36899999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhhcccccccCCCCchhhHHHHHHHHHHHHHHHHhhhchHHHHHHHHHhhcCCCCCCcccccCCCCCCC
Q 018651           96 ALYMTALEITKSNVGTATVRLGFSDTTATTIANAAAGLSSAMAAQLIWTPVDVVSQRLMVQGYSKNNSKTIVPNVSSCRY  175 (352)
Q Consensus        96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~i~~Pld~ik~r~q~~~~~~~~~~~~~~~~~~~~~  175 (352)
                      +++|.+||.+++.+......  ...........+++|++|++++.++++|+|+||+|+|.+....         .....|
T Consensus        85 ~~~f~~ye~~k~~~~~~~~~--~~~~~~~~~~~~~ag~~ag~~~~~~~~Pld~vktrlq~~~~~~---------~~~~~~  153 (297)
T 1okc_A           85 ALNFAFKDKYKQIFLGGVDR--HKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKG---------AAQREF  153 (297)
T ss_dssp             HHHHHHHHHHHHHHHTTCCT--TTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSS---------TTTCSC
T ss_pred             HHHHHHHHHHHHHhccccCc--ccchHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHhccccCC---------CcCcCC
Confidence            99999999999854321110  0111234577899999999999999999999999999985321         113568


Q ss_pred             CcHHHHHHHHHHhcCccccccchhHHHHhhhccchhHHHHHHHHHHHHhhccCCCCCcccccccCCCCCCCCCCCcchHH
Q 018651          176 SNGLDAFRKILVADGPRGLYRGFGISILAYAPSNAVWWASYSVANRLIWGGFGCHISQKDENSASSGCTSYKPNSKAVVA  255 (352)
Q Consensus       176 ~~~~~~~~~i~~~~G~~glyrG~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (352)
                      +++++++++|+++||++|||||+.+++++.+|+.+++|.+||.+++.+.+..                       ..+..
T Consensus       154 ~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~~~~~f~~ye~~k~~~~~~~-----------------------~~~~~  210 (297)
T 1okc_A          154 TGLGNCITKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDPK-----------------------NVHII  210 (297)
T ss_dssp             SSHHHHHHHHHHHHCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHSSCGGG-----------------------CSCHH
T ss_pred             CCHHHHHHHHHHhccHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHhccCC-----------------------CccHH
Confidence            9999999999999999999999999999999999999999999998653210                       11256


Q ss_pred             HHHHHHHHHHHhHHhhcchHHHHHHHHhhcccc-ccCCCCCCcHHHHHHHHHHhhchhhhhcchhhhhhhhhcchhhhHh
Q 018651          256 VQTLSAAMASGVSALITMPLDTIKTRLQVLDAE-EKGQRRPLTVLQTVRNLVKEGGFAACYRGLGPRWASMSMSATTMIT  334 (352)
Q Consensus       256 ~~~~~g~~ag~~~~~it~Pld~ik~r~q~~~~~-~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~~~~~~~~~~~~~~  334 (352)
                      ..+++|++||++++++++|+|+||+|||++... .....|. ++++|+++++++||++|||||+.++++|. +.++++|.
T Consensus       211 ~~~~~g~~ag~~a~~~t~P~dvvktr~q~~~~~~~~~~~y~-~~~~~~~~i~~~eG~~glyrG~~~~~~r~-~~~~~~f~  288 (297)
T 1okc_A          211 VSWMIAQTVTAVAGLVSYPFDTVRRRMMMQSGRKGADIMYT-GTVDCWRKIAKDEGPKAFFKGAWSNVLRG-MGGAFVLV  288 (297)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCGGGCSCS-SHHHHHHHHHHHHCGGGGGTTHHHHHHHH-HHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcChHHHHHHHHhhcCCCCCCCCCCC-CHHHHHHHHHHHcCcCeEecchHHHHHhh-ccceeeeh
Confidence            788999999999999999999999999997643 2234678 99999999999999999999999999996 57799999


Q ss_pred             hHHHHHHHh
Q 018651          335 TYEFLKRHS  343 (352)
Q Consensus       335 ~~~~~~~~~  343 (352)
                      +||.+|+++
T Consensus       289 ~ye~~k~~l  297 (297)
T 1okc_A          289 LYDEIKKFV  297 (297)
T ss_dssp             HHHTC----
T ss_pred             HHHHHHhhC
Confidence            999998764



>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 352
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 2e-16
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 4e-10
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
 Score = 76.3 bits (186), Expect = 2e-16
 Identities = 58/316 (18%), Positives = 106/316 (33%), Gaps = 45/316 (14%)

Query: 32  FLGAALFSGVSA-ALYPIVVLKTRQQVLSTPI---------SSFKMSFQIMCYEGFKGFY 81
           FL   + + +S  A+ PI  +K   QV                     +I   +GF  F+
Sbjct: 10  FLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFW 69

Query: 82  RGFGTSLMGTIPARALYMTALEITKSNVGTATVRLGFSDTTATTIANAAAGLSSAMAAQL 141
           RG   +++   P +AL     +  K        R            N A+G ++   +  
Sbjct: 70  RGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDR--HKQFWRYFAGNLASGGAAGATSLC 127

Query: 142 IWTPVDVVSQRLMVQGYSKNNSKTIVPNVSSCRYSNGLDAFRKILVADGPRGLYRGFGIS 201
              P+D    RL          +          ++   +   KI  +DG RGLY+GF +S
Sbjct: 128 FVYPLDFARTRLAADVGKGAAQR---------EFTGLGNCITKIFKSDGLRGLYQGFNVS 178

Query: 202 ILAYAPSNAVWWASYSVANRLIWGGFGCHISQKDENSASSGCTSYKPNSKAVVAVQTLSA 261
           +       A ++  Y  A  ++      HI                        V  + A
Sbjct: 179 VQGIIIYRAAYFGVYDTAKGMLPDPKNVHI-----------------------IVSWMIA 215

Query: 262 AMASGVSALITMPLDTIKTRLQVLDAEEKGQRRPLTVLQTVRNLVKEGGFAACYRGLGPR 321
              + V+ L++ P DT++ R+ +    +         +   R + K+ G  A ++G    
Sbjct: 216 QTVTAVAGLVSYPFDTVRRRMMMQSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSN 275

Query: 322 WASMSMSATTMITTYE 337
                M    ++  Y+
Sbjct: 276 VL-RGMGGAFVLVLYD 290


>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query352
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 100.0
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 99.97
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
Probab=100.00  E-value=3.3e-50  Score=358.44  Aligned_cols=280  Identities=20%  Similarity=0.251  Sum_probs=243.9

Q ss_pred             CCchHHHHHHHhHHHHhHhhhhccHHHHHHHHHhCCC---------CCCHHHHHHHHHHhhcccccccchhHhhhcchhh
Q 018651           24 MLDKSKFFFLGAALFSGVSAALYPIVVLKTRQQVLST---------PISSFKMSFQIMCYEGFKGFYRGFGTSLMGTIPA   94 (352)
Q Consensus        24 ~~~~~~~~~~g~~a~~~~~~~~~Pld~ik~~~q~~~~---------~~~~~~~~~~i~~~~G~~~ly~G~~~~l~~~~~~   94 (352)
                      +++....+++|++|++++++++||||+||+|+|++..         ..+.++++++++++||+++||+|+.+.+++..+.
T Consensus         3 ~~~~~~~~laG~~a~~i~~~~~~Pld~iK~r~Q~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~l~~~~~~   82 (292)
T d1okca_           3 ALSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPT   82 (292)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHGGGCSSCCGGGSCCSHHHHHHHHHHHHCGGGGGTTTHHHHHHHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCCCCCCCCcccccCCHHHHHHHHHHhhhhhhhhhccchhhhhhhcc
Confidence            3466788999999999999999999999999998653         2689999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHhhcccccccCCCCchhhHHHHHHHHHHHHHHHHhhhchHHHHHHHHHhhcCCCCCCcccccCCCCCC
Q 018651           95 RALYMTALEITKSNVGTATVRLGFSDTTATTIANAAAGLSSAMAAQLIWTPVDVVSQRLMVQGYSKNNSKTIVPNVSSCR  174 (352)
Q Consensus        95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~i~~Pld~ik~r~q~~~~~~~~~~~~~~~~~~~~  174 (352)
                      ..++|..|+.+++.+......  ...........+++|.+|++++.++.+|+|++|+|+|.+....         ...+.
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~a~~~~~~~~~P~~~ik~r~~~~~~~~---------~~~~~  151 (292)
T d1okca_          83 QALNFAFKDKYKQIFLGGVDR--HKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKG---------AAQRE  151 (292)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCT--TTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSS---------TTTCS
T ss_pred             cchhHHHHHHHHHHHhccccc--ccccchhhhhhhhhhhhhhhhHHhhhhhhhhhheeeecccccc---------ccccc
Confidence            999999999999988765322  1233345667788999999999999999999999999987533         22456


Q ss_pred             CCcHHHHHHHHHHhcCccccccchhHHHHhhhccchhHHHHHHHHHHHHhhccCCCCCcccccccCCCCCCCCCCCcchH
Q 018651          175 YSNGLDAFRKILVADGPRGLYRGFGISILAYAPSNAVWWASYSVANRLIWGGFGCHISQKDENSASSGCTSYKPNSKAVV  254 (352)
Q Consensus       175 ~~~~~~~~~~i~~~~G~~glyrG~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (352)
                      +.+..++++++++++|+++||+|+.+++++++++.+++|..||.+++.+.+.                       .....
T Consensus       152 ~~~~~~~~~~~~~~~G~~~l~~G~~~~~~~~~~~~~~~~~~~~~~k~~~~~~-----------------------~~~~~  208 (292)
T d1okca_         152 FTGLGNCITKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDP-----------------------KNVHI  208 (292)
T ss_dssp             CSSHHHHHHHHHHHHCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHSSCGG-----------------------GCSCH
T ss_pred             cccHHHHHHHhhhccchhhhhccccccccceehHhhhhhhhccchhhhcccc-----------------------cccch
Confidence            8899999999999999999999999999999999999999999999865322                       12236


Q ss_pred             HHHHHHHHHHHHhHHhhcchHHHHHHHHhhcccccc-CCCCCCcHHHHHHHHHHhhchhhhhcchhhhhhhhhcchhhhH
Q 018651          255 AVQTLSAAMASGVSALITMPLDTIKTRLQVLDAEEK-GQRRPLTVLQTVRNLVKEGGFAACYRGLGPRWASMSMSATTMI  333 (352)
Q Consensus       255 ~~~~~~g~~ag~~~~~it~Pld~ik~r~q~~~~~~~-~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~~~~~~~~~~~~~  333 (352)
                      ...++++++++++++++++|+||||+|||.+...+. ...|. ++++|+++++++||++|||||+.++++|.+| .+++|
T Consensus       209 ~~~~~~~~~~~~~a~~~t~P~dvvktR~q~~~~~~~~~~~y~-~~~~~~~~i~~~eG~~~lyrG~~~~~~r~i~-~~i~~  286 (292)
T d1okca_         209 IVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQSGRKGADIMYT-GTVDCWRKIAKDEGPKAFFKGAWSNVLRGMG-GAFVL  286 (292)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCGGGCSCS-SHHHHHHHHHHHHCGGGGGTTHHHHHHHHHH-HHHHH
T ss_pred             HHHHHHHHHHHHHHhhccccHHHHHHHHHhcCCCCCCCCCCC-CHHHHHHHHHHhcCcCcccccHHHHHHHHHH-HHhhh
Confidence            778999999999999999999999999999876543 34678 9999999999999999999999999999766 58999


Q ss_pred             hhHHHH
Q 018651          334 TTYEFL  339 (352)
Q Consensus       334 ~~~~~~  339 (352)
                      .+||++
T Consensus       287 ~~ye~l  292 (292)
T d1okca_         287 VLYDEI  292 (292)
T ss_dssp             HHHHTC
T ss_pred             hHhhcC
Confidence            999974



>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure