Citrus Sinensis ID: 018717
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 351 | ||||||
| 356561859 | 549 | PREDICTED: probable LRR receptor-like se | 0.943 | 0.602 | 0.582 | 1e-102 | |
| 359478663 | 522 | PREDICTED: LOW QUALITY PROTEIN: probable | 0.954 | 0.641 | 0.546 | 1e-92 | |
| 297746155 | 576 | unnamed protein product [Vitis vinifera] | 0.951 | 0.579 | 0.554 | 3e-91 | |
| 359479013 | 609 | PREDICTED: putative leucine-rich repeat | 0.951 | 0.548 | 0.554 | 4e-91 | |
| 224130880 | 590 | predicted protein [Populus trichocarpa] | 0.943 | 0.561 | 0.525 | 5e-86 | |
| 224125440 | 543 | predicted protein [Populus trichocarpa] | 0.934 | 0.604 | 0.508 | 3e-82 | |
| 224125430 | 372 | predicted protein [Populus trichocarpa] | 0.871 | 0.822 | 0.511 | 2e-81 | |
| 147816691 | 361 | hypothetical protein VITISV_009236 [Viti | 0.826 | 0.803 | 0.480 | 1e-75 | |
| 224147524 | 305 | predicted protein [Populus trichocarpa] | 0.803 | 0.924 | 0.465 | 9e-70 | |
| 255578743 | 511 | serine-threonine protein kinase, plant-t | 0.720 | 0.495 | 0.517 | 3e-66 |
| >gi|356561859|ref|XP_003549194.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At5g59680-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 197/338 (58%), Positives = 240/338 (71%), Gaps = 7/338 (2%)
Query: 4 VFLSIDCGSSESYTDENGIEWTGDDAYIQNGDNKTVAYPSLVPYPMSTMRVFSTRKKNCY 63
VF+SIDCGSSES D+N I W GDD YIQ+G++ V S P+ST+RVF+ RKKNCY
Sbjct: 26 VFVSIDCGSSESSIDKNNIRWIGDDDYIQHGESHQVYLGS---NPLSTLRVFTNRKKNCY 82
Query: 64 SFKVDEGERVLVRASFYYGNYDRKNSPPVFDLQFDGNFWTTVNTSLRSYDVLSYEAIYVV 123
S +V +GE++L RASFYYGNYD K SPPVFDLQFDGN+W TVNTS Y V YEAIYV
Sbjct: 83 SIRVGKGEKILTRASFYYGNYDDKFSPPVFDLQFDGNYWATVNTSSYYYYV-DYEAIYVT 141
Query: 124 KRNFTSICVAQTKPGQLPFISAIEVRSLGINMYSQVPSNLALHLIQRAAMGANQTIIRYP 183
K NFTSICVAQT+P Q PFIS++EVRSL MYS V SN AL L R A G NQT IRYP
Sbjct: 142 KGNFTSICVAQTRPNQFPFISSLEVRSLDPKMYSHVDSNHALILKWRYASGGNQT-IRYP 200
Query: 184 DDAYDRTWNGAYGFGLSEVASQALSINITT-NNSPPTAVPKNAVVSASTSHIIILFTDLP 242
DD +DR W A G GLSEV S+A I+I+T + PP A +N++VS+ST + LP
Sbjct: 201 DDVFDRIWTPADGIGLSEVKSEASGIDISTAEDHPPEAALENSIVSSSTRQYMQFINRLP 260
Query: 243 AKPTPVYIATYFSEVLLLNPTQKRSFQLCIDDKPISDPIIPPFASASEAYVTNRIASASN 302
K P+YI YFSEV + + KRS Q+ ID+KP PI+PPF S E Y+TN ASA
Sbjct: 261 TKELPIYITAYFSEV-MKSAVGKRSIQMYIDNKPFLSPIVPPFGSVKEVYITNMTASAET 319
Query: 303 SFSLRATSDSTLPPLVNAMEIYTVSNPLTNGTNVKDGE 340
SF L+A+ STLPP++NA+E+YT+S+ LT GT+ +D E
Sbjct: 320 SFVLQASETSTLPPIINAVEVYTLSDTLTAGTDSRDVE 357
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359478663|ref|XP_003632155.1| PREDICTED: LOW QUALITY PROTEIN: probable LRR receptor-like serine/threonine-protein kinase At1g05700-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|297746155|emb|CBI16211.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|359479013|ref|XP_002281598.2| PREDICTED: putative leucine-rich repeat receptor-like protein kinase At2g19210-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|224130880|ref|XP_002328399.1| predicted protein [Populus trichocarpa] gi|222838114|gb|EEE76479.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|224125440|ref|XP_002319587.1| predicted protein [Populus trichocarpa] gi|222857963|gb|EEE95510.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|224125430|ref|XP_002319584.1| predicted protein [Populus trichocarpa] gi|222857960|gb|EEE95507.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|147816691|emb|CAN77768.1| hypothetical protein VITISV_009236 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|224147524|ref|XP_002336492.1| predicted protein [Populus trichocarpa] gi|222835550|gb|EEE73985.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|255578743|ref|XP_002530229.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis] gi|223530233|gb|EEF32135.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 351 | ||||||
| TAIR|locus:2075326 | 471 | AT3G46280 "AT3G46280" [Arabido | 0.903 | 0.673 | 0.367 | 1.2e-51 | |
| TAIR|locus:2075316 | 470 | AT3G46270 "AT3G46270" [Arabido | 0.934 | 0.697 | 0.348 | 1.2e-47 | |
| TAIR|locus:4515102579 | 574 | AT1G24485 "AT1G24485" [Arabido | 0.928 | 0.567 | 0.357 | 3e-46 | |
| TAIR|locus:2075301 | 434 | AT3G46260 "AT3G46260" [Arabido | 0.920 | 0.744 | 0.338 | 6.2e-46 | |
| TAIR|locus:2094103 | 519 | AT3G19230 [Arabidopsis thalian | 0.925 | 0.626 | 0.317 | 2.4e-37 | |
| TAIR|locus:2078171 | 883 | AT3G46400 [Arabidopsis thalian | 0.943 | 0.374 | 0.317 | 3.1e-36 | |
| TAIR|locus:2017572 | 882 | AT1G51790 [Arabidopsis thalian | 0.937 | 0.373 | 0.309 | 6e-35 | |
| TAIR|locus:2195850 | 890 | AT1G51860 [Arabidopsis thalian | 0.931 | 0.367 | 0.320 | 9.4e-34 | |
| TAIR|locus:2066163 | 872 | AT2G29000 [Arabidopsis thalian | 0.880 | 0.354 | 0.318 | 3.1e-33 | |
| TAIR|locus:2078186 | 889 | AT3G46340 [Arabidopsis thalian | 0.914 | 0.361 | 0.288 | 5.3e-33 |
| TAIR|locus:2075326 AT3G46280 "AT3G46280" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 536 (193.7 bits), Expect = 1.2e-51, P = 1.2e-51
Identities = 122/332 (36%), Positives = 182/332 (54%)
Query: 6 LSIDCGSSESYTDENGIEWTGDDAYIQNGDNKTVAYPSLVPYPMSTMRVFSTRKKNCYS- 64
+SIDCGS+ SY D N + W GD ++ NG+ + P +V P++T+R F T + NCY+
Sbjct: 25 ISIDCGSTGSYVDSNNVTWVGDKGFVTNGEPMKI--PDVVKKPINTLRYFPTGQTNCYTN 82
Query: 65 FKVDEGERVLVRASFYYGNYDRKNSPPVFDLQFDGNFWTTV--NTSLRSYDVLSY--EAI 120
V +G++ LVR FYY NYD K SPP FD+ +DG ++ SL + + Y E I
Sbjct: 83 IPVTKGQKTLVRTKFYYENYDAKFSPPSFDVIYDGKHRDSIVITESLLNDEETFYFSEVI 142
Query: 121 YVVKRNFTSICVAQTKPGQLPFISAIEVRSLGINMYSQVPSNLALHLIQRAAMGANQTII 180
YV + S+C+ +T P PFIS+IEV SL MY + N L L R A GA + +I
Sbjct: 143 YVPENKNISVCLLRTSPSDNPFISSIEVYSLDTGMYDDLGPNEGLILHDRIAYGAKE-LI 201
Query: 181 RYPDDAYDRTWN--GAYGFGLSEVASQALSINIT-TNNSPPTAVPKNAVVSASTSHIIIL 237
YP D Y R W G+ L+++ + A SI+IT +N PP V A+ +++
Sbjct: 202 SYPLDPYGRVWLALGSQDSTLTDLTTSAPSIDITGASNKPPEIVMSKALSGVG---LVLS 258
Query: 238 FTDLPAKPTPVYIATYFSEVLLLNPTQKRSFQLCXXXXXXXXXXXX-XFASASEAYVTNR 296
LP PVY+ YFSE L TQ+RSF + F A++ + +
Sbjct: 259 DQTLPLTGVPVYLVLYFSEPQSLGRTQRRSFNVFLDNTQVGSRPIVPVFGKATQFILRDV 318
Query: 297 IASASNSFSLRATSDSTLPPLVNAMEIYTVSN 328
+A++++ ++T DS LPPL+N +E+Y++SN
Sbjct: 319 VATSASQIVFQSTDDSVLPPLINGLELYSISN 350
|
|
| TAIR|locus:2075316 AT3G46270 "AT3G46270" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:4515102579 AT1G24485 "AT1G24485" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2075301 AT3G46260 "AT3G46260" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2094103 AT3G19230 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2078171 AT3G46400 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2017572 AT1G51790 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2195850 AT1G51860 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2066163 AT2G29000 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2078186 AT3G46340 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 351 | |||
| pfam12819 | 335 | pfam12819, Malectin_like, Carbohydrate-binding pro | 6e-91 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 1e-10 |
| >gnl|CDD|221790 pfam12819, Malectin_like, Carbohydrate-binding protein of the ER | Back alignment and domain information |
|---|
Score = 275 bits (705), Expect = 6e-91
Identities = 122/339 (35%), Positives = 173/339 (51%), Gaps = 24/339 (7%)
Query: 8 IDCGSS--ESYTDE-NGIEWTGDDAYIQNGDNKTVAY---PSLVPYPMSTMRVFSTRKKN 61
IDCG ESYTD GI W D +I G + ++ S + P T+R F K+N
Sbjct: 1 IDCGLPSNESYTDPSTGITWVSDAGFIDTGKSGNISKENSSSFLSKPYKTLRSFPDGKRN 60
Query: 62 CYSFKV--DEGERVLVRASFYYGNYDRKNS---PPVFDLQFDGNFWTTVNTSLRSYDVLS 116
CY+ V +G + L+RA+F YGNYD NS PP FDL N WTTVN S S D +
Sbjct: 61 CYTLPVTPGKGTKYLIRATFLYGNYDGLNSVSSPPSFDLYLGVNLWTTVNLSNDSGDSVV 120
Query: 117 YE-AIYVVKRNFTSICVAQTKPGQLPFISAIEVRSLGINMYSQVPSNLALHLIQRAAMGA 175
E I+V K + S+C+ T G PFISA+E+R L ++Y + AL L+ R G
Sbjct: 121 KEYIIHVTKSDTLSVCLVNTGTGT-PFISALELRPLPDSLYPSSGGSQALKLVARLNFGG 179
Query: 176 NQTIIRYPDDAYDRTWNGAYGFGLSEVASQALSINITTNNS---PPTAVPKNAVVSASTS 232
++ IRYPDD YDR W + S +LS++I++NN+ PP+AV + AV + S
Sbjct: 180 SEGTIRYPDDVYDRIWEPFFSSPGWSQISTSLSVDISSNNAPYIPPSAVLQTAVTPTNAS 239
Query: 233 HIIILFTDLPAKPTPVYIATYFSEVLLLNPTQKRSFQLCIDDKPISDPIIPP-----FAS 287
+ DL Y+ +F+E + + R F + I+ K + + P +
Sbjct: 240 APLNFTWDLVDPNFEYYVYLHFAE---IQSLETREFDIYINGKTVYGDVSPKYLGTDTGA 296
Query: 288 ASEAYVTNRIASASNSFSLRATSDSTLPPLVNAMEIYTV 326
+ N + SL TS STLPPL+NA+EI+ V
Sbjct: 297 LYLDFPVNVSGGGLLNISLVPTSGSTLPPLLNALEIFKV 335
|
Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. The domain is found on a number of plant receptor kinases. Length = 335 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 351 | |||
| PF12819 | 347 | Malectin_like: Carbohydrate-binding protein of the | 100.0 | |
| PLN03150 | 623 | hypothetical protein; Provisional | 100.0 | |
| PF11721 | 174 | Malectin: Di-glucose binding within endoplasmic re | 99.4 | |
| PF11721 | 174 | Malectin: Di-glucose binding within endoplasmic re | 99.37 | |
| PLN03150 | 623 | hypothetical protein; Provisional | 99.35 | |
| PF12819 | 347 | Malectin_like: Carbohydrate-binding protein of the | 98.93 |
| >PF12819 Malectin_like: Carbohydrate-binding protein of the ER; InterPro: IPR024788 Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan [] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-79 Score=590.65 Aligned_cols=318 Identities=37% Similarity=0.642 Sum_probs=263.8
Q ss_pred EccCCCCC---CcCC-CCCeeecCCCcccCCcceeccC-----CCCCCCcceeEeeeCCCCCceEEEeec--CCCeEEEE
Q 018717 8 IDCGSSES---YTDE-NGIEWTGDDAYIQNGDNKTVAY-----PSLVPYPMSTMRVFSTRKKNCYSFKVD--EGERVLVR 76 (351)
Q Consensus 8 IdCG~~~~---~~d~-~g~~w~~D~~f~~~g~~~~v~~-----~~~~~~~y~t~R~F~~~~~~cY~~~v~--~g~~ylVR 76 (351)
||||++.+ |+|. +||+|++|.+|+++|.++.++. .....++|+|||+||+|.|+||+||+. +|+|||||
T Consensus 1 IdCG~~~~~s~y~D~~tg~~~~~D~~~~~~g~~~~i~~~~~~~~~~~~~~y~taR~F~~g~r~cY~l~~~~~~~~~yliR 80 (347)
T PF12819_consen 1 IDCGSSSNSSSYVDDSTGRTWVSDDDFIDTGKSGNISSQPDSSSSDSSPPYQTARIFPEGSRNCYTLPVTPPGGGKYLIR 80 (347)
T ss_pred CcCCCCCCCcccccCCCCcEEeCCCCcccCCCccccccccCCcCCccccccceEEEcCCCCccEEEeeccCCCCceEEEE
Confidence 79999754 6774 7999999999999999887732 113568999999999998999999987 56699999
Q ss_pred EEEecCCCCCCC-----CCCeEEEEeCCcEEEEEEeCCCCcceeEEEEEEEee-CCcEEEEEEecCCCCCCeeEEEEEEE
Q 018717 77 ASFYYGNYDRKN-----SPPVFDLQFDGNFWTTVNTSLRSYDVLSYEAIYVVK-RNFTSICVAQTKPGQLPFISAIEVRS 150 (351)
Q Consensus 77 l~F~ygnyd~~~-----~~~~Fdv~~~~~~~~tv~~~~~~~~~~~~E~i~~~~-~~~l~vcf~~~~~~s~pFIsaiEl~~ 150 (351)
|||+|||||+++ .++.|+|++|++.|.+|+.+.+...+++||+++.+. ++.|+|||+|+++|++||||||||||
T Consensus 81 l~F~~gnyd~~~fs~~~~~~~FdL~~~~n~~~tV~~~~~~~~~~~~E~ii~v~~~~~l~vclv~~~~g~~pFIsaiEl~~ 160 (347)
T PF12819_consen 81 LHFYYGNYDGLNFSVSSSPPTFDLLLGFNFWSTVNLSNSPSSPVVKEFIINVTWSDTLSVCLVPTGSGTFPFISAIELRP 160 (347)
T ss_pred EEeccccccccccccccCCcceEEEECCceeEEEEecCCCcceEEEEEEEEEcCCCcEEEEEEeCCCCCCCceeEEEEEE
Confidence 999999999874 247799999999999999865322479999888877 79999999999876569999999999
Q ss_pred cCCccccc--cCccceeeEEEeeecCcccccccCCCCCCCceecCCC-CCCceeecccceeee--cc-CCCCCCchhhhh
Q 018717 151 LGINMYSQ--VPSNLALHLIQRAAMGANQTIIRYPDDAYDRTWNGAY-GFGLSEVASQALSIN--IT-TNNSPPTAVPKN 224 (351)
Q Consensus 151 l~~~~y~~--~~~~~~l~~~~R~n~G~~~~~~ry~dD~~dR~W~~d~-~~~~~~~~~~~~~i~--~~-~~~~~P~~V~~T 224 (351)
||+++|+. ...+.+|++++|+||||....+|||||.|||+|.+.. ...|..++++. .++ .. +.+.||.+||+|
T Consensus 161 lp~~ly~~~~~~~s~~L~~~~R~n~G~~~~~iryp~D~~dR~W~~~~~~~~~~~ist~~-~i~~~~~~~~~~~P~~V~~T 239 (347)
T PF12819_consen 161 LPDSLYPDTDANSSQALETVYRLNVGGSSSFIRYPDDTYDRIWQPYSSSPGWSNISTTS-NININSSNNPYDAPSAVYQT 239 (347)
T ss_pred CCccceeccccCCCceeEEEEeecCCCcccccCCCCCcceeeccccccCccccccccce-eeecccCCccCcChHHHHHh
Confidence 99999953 3456789999999999987336999999999999753 45677665543 354 22 689999999999
Q ss_pred hhccCCCcceEEEEecCCCCCCCEEEEEEeeeecccC-CCceEEEEEEECCeeccCCCcCccccceee-----EEEeeeC
Q 018717 225 AVVSASTSHIIILFTDLPAKPTPVYIATYFSEVLLLN-PTQKRSFQLCIDDKPISDPIIPPFASASEA-----YVTNRIA 298 (351)
Q Consensus 225 A~~~~~~s~~~~~~~~~~~~~~~y~v~lHFaEi~~~~-~~~~R~F~I~iNg~~~~~~~~p~y~~~~~~-----~~~~~~~ 298 (351)
|+++.+.+..++++|.+.+++..||||||||||+.+. ..++|+|+|||||+.+.+++.|.+.....+ +++.+..
T Consensus 240 A~~~~~~s~~~nltw~~~~~~~~y~v~lHFaEi~~~~~~~~~R~F~IyiN~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 319 (347)
T PF12819_consen 240 ARTPSNSSDPLNLTWSFVDPGFSYYVRLHFAEIQSLSPNNNQREFDIYINGQTAYSDVSPPYLGADTVPYYSDYVVNVPD 319 (347)
T ss_pred hhcccccccceEEEeccCCCCccEEEEEEEeecccccCCCCeEEEEEEECCeEccCccCcccccCcceEeecceEEEecC
Confidence 9999988767999999978899999999999999764 556899999999998866666655443222 4455555
Q ss_pred CCcEEEEEEecCCCCCCCceeeEEEEee
Q 018717 299 SASNSFSLRATSDSTLPPLVNAMEIYTV 326 (351)
Q Consensus 299 ~~~~~isl~~t~~S~lppiLNalEI~~v 326 (351)
++.++|+|+++++|+|||||||||||||
T Consensus 320 ~~~~~isL~~t~~S~lppiLNalEIy~v 347 (347)
T PF12819_consen 320 SGFLNISLGPTPDSTLPPILNALEIYKV 347 (347)
T ss_pred CCEEEEEEEeCCCCCcCceeEeeeeEeC
Confidence 6689999999999999999999999996
|
This entry represents a malectin-like domain found in a number of plant receptor kinases. |
| >PLN03150 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PF11721 Malectin: Di-glucose binding within endoplasmic reticulum; InterPro: IPR021720 Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan | Back alignment and domain information |
|---|
| >PF11721 Malectin: Di-glucose binding within endoplasmic reticulum; InterPro: IPR021720 Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan | Back alignment and domain information |
|---|
| >PLN03150 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PF12819 Malectin_like: Carbohydrate-binding protein of the ER; InterPro: IPR024788 Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan [] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 351 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 6e-07 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 50.2 bits (119), Expect = 6e-07
Identities = 44/365 (12%), Positives = 83/365 (22%), Gaps = 116/365 (31%)
Query: 14 ESYTDENGIEWTGDDAYIQNGDNKTVAYPSLVPYPMSTMRVFSTRKKNCYSFKVDE---- 69
E YI+ D Y +S ++ + ++ + +
Sbjct: 96 SPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLI 155
Query: 70 ------GERVLVRASFYYGNYDRKNSPPVFDLQFDGNFWTTVNTSLRSYDVLSYEAIYVV 123
G+ + S V FW + VL
Sbjct: 156 DGVLGSGKTWVALDVC--------LSYKVQCKMDFKIFWLNLKNCNSPETVL-------- 199
Query: 124 KRNFTSICVAQTKPGQLPFISAIEVRSLGINMYSQVPSNLALHLIQRAAMGANQTIIRYP 183
+ Q P L I+ L L + Y
Sbjct: 200 -EMLQKLLY-QIDPNWTSRSDHSSNIKLRIHSIQAELRRL---LKSK----------PYE 244
Query: 184 ------DDAYD-RTWNGAYGFGLSEVASQALSINITTNNSPPTAVPKNAVVSASTSHIII 236
+ + + WN A+ + L +TT T + + +A+T+HI +
Sbjct: 245 NCLLVLLNVQNAKAWN-AFNLS-----CKIL---LTTRFKQVT----DFLSAATTTHISL 291
Query: 237 --------------LF--------TDLPA---KPTPVYIA-------------TYFSEVL 258
L DLP P ++ + V
Sbjct: 292 DHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVN 351
Query: 259 L-------------LNPT-QKRSFQ-LCI--DDKPISDPIIPPFASASEAYVTNRIASAS 301
L P ++ F L + I ++ + +
Sbjct: 352 CDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKL 411
Query: 302 NSFSL 306
+ +SL
Sbjct: 412 HKYSL 416
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 351 | |||
| 2jwp_A | 174 | Malectin, MGC80075; sugar binding, sugar binding p | 99.89 | |
| 2jwp_A | 174 | Malectin, MGC80075; sugar binding, sugar binding p | 99.87 | |
| 2w3j_A | 145 | Carbohydrate binding module; sugar-binding protein | 90.04 | |
| 2w47_A | 144 | Lipolytic enzyme, G-D-S-L; hydrolase; HET: UNF; 1. | 90.0 | |
| 2w87_A | 139 | Esterase D, XYL-CBM35; plant cell WALL degradation | 83.83 | |
| 2vzp_A | 127 | Aocbm35, EXO-beta-D-glucosaminidase; family 35, CS | 82.46 |
| >2jwp_A Malectin, MGC80075; sugar binding, sugar binding protein; NMR {Xenopus laevis} PDB: 2k46_A* 2kr2_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1.4e-23 Score=183.47 Aligned_cols=144 Identities=13% Similarity=0.133 Sum_probs=99.6
Q ss_pred eEEEeeecCcccccccCCCCCCCceecCCCCCC-ceeecccceeeeccCCCCCCchhhhhhhccCCCcceEEEEecCC-C
Q 018717 166 HLIQRAAMGANQTIIRYPDDAYDRTWNGAYGFG-LSEVASQALSINITTNNSPPTAVPKNAVVSASTSHIIILFTDLP-A 243 (351)
Q Consensus 166 ~~~~R~n~G~~~~~~ry~dD~~dR~W~~d~~~~-~~~~~~~~~~i~~~~~~~~P~~V~~TA~~~~~~s~~~~~~~~~~-~ 243 (351)
++++|+||||+.. . |..+|.|.+|..+. ....+.....+.+...+.+|..||||||.+.. +++|.+| +
T Consensus 5 ~~~~~INcGg~~~-~----d~~gr~w~~D~~~~~~g~~~~~~~~~~~~~~~~~~~~lY~TaR~~~~-----~~tY~f~v~ 74 (174)
T 2jwp_A 5 KVIWAVNAGGESH-V----DVHGIHYRKDPLEGRVGRASDYGMKLPILRSNPEDQVLYQTERYNED-----SFGYDIPIK 74 (174)
T ss_dssp HEEEEEEETSSSE-E----ETTTEEECSSCSSTTCCCCCCCCTTSCCSSSCHHHHHTTTCCCCCCS-----CEEEEEECC
T ss_pred cEEEEEECCCCCc-c----CCCCCEEcCCcCcccCCcccccccceEecccCCCCchhhhhhccCCC-----CeEEEEEeC
Confidence 5799999999875 2 55799999985532 11111000011111235578899999998743 5788888 4
Q ss_pred CCCCEEEEEEeeeecccCCCceEEEEEEECCeeccCCC---------cCccccceeeEEEee------------eCCCcE
Q 018717 244 KPTPVYIATYFSEVLLLNPTQKRSFQLCIDDKPISDPI---------IPPFASASEAYVTNR------------IASASN 302 (351)
Q Consensus 244 ~~~~y~v~lHFaEi~~~~~~~~R~F~I~iNg~~~~~~~---------~p~y~~~~~~~~~~~------------~~~~~~ 302 (351)
++..|+|||||||+.. .+.++|+|+|+|||+++.+++ .|.+++ |.+.+ ...|.+
T Consensus 75 ~~G~Y~VrLhF~ei~~-~~~~~rvFdV~ing~~~l~~fdi~~~ag~~~~~~~~----~~~~v~~~~l~i~~~~~~~~g~L 149 (174)
T 2jwp_A 75 EEGEYVLVLKFAEVYF-AQSQQKVFDVRVNGHTVVKDLDIFDRVGHSTAHDEI----IPISIKKGKLSVQGEVSTFTGKL 149 (174)
T ss_dssp SCEEEEEEEEEECCSC-CCSSSSCEEEEETTEEEEEEECHHHHHSSSSCEEEE----EEEEEETTEEEETTEEEECCSEE
T ss_pred CCeEEEEEEEEecccc-CCCCCeEeEEEECCEEeecCcCHHHhhCCCeeEEEE----EEEEEecCceeeeeeecccCCeE
Confidence 5679999999999984 568999999999999875532 344544 33332 246678
Q ss_pred EEEEEecCCCCCCCceeeEEEEee
Q 018717 303 SFSLRATSDSTLPPLVNAMEIYTV 326 (351)
Q Consensus 303 ~isl~~t~~S~lppiLNalEI~~v 326 (351)
+|++.|. +...|+||||||++-
T Consensus 150 ~I~f~p~--~~~~a~inaIEI~~~ 171 (174)
T 2jwp_A 150 SVEFVKG--YYDNPKVCALFIMKG 171 (174)
T ss_dssp EEEEECS--SSCSSSEEEEEEESS
T ss_pred EEEEecc--CCCCcEEEEEEEEeC
Confidence 8888864 344699999999985
|
| >2jwp_A Malectin, MGC80075; sugar binding, sugar binding protein; NMR {Xenopus laevis} PDB: 2k46_A* 2kr2_A* | Back alignment and structure |
|---|
| >2w3j_A Carbohydrate binding module; sugar-binding protein, family 35, uronic acid sugars; 1.70A {Uncultured bacterium} | Back alignment and structure |
|---|
| >2w47_A Lipolytic enzyme, G-D-S-L; hydrolase; HET: UNF; 1.40A {Clostridium thermocellum} PDB: 2w1w_A | Back alignment and structure |
|---|
| >2w87_A Esterase D, XYL-CBM35; plant cell WALL degradation, carbohydrate protein binding, xylan, CMB35, glucuronic acid, hydrolase; HET: GCU; 1.60A {Cellvibrio japonicus} PDB: 2w46_A | Back alignment and structure |
|---|
| >2vzp_A Aocbm35, EXO-beta-D-glucosaminidase; family 35, CSXA, glucuronic acid, hydrolase; 1.05A {Amycolatopsis orientalis} PDB: 2vzq_A* 2vzr_A* | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 351 | |||
| d2o14a1 | 146 | Hypothetical protein YxiM {Bacillus subtilis [TaxI | 96.92 | |
| d2o14a1 | 146 | Hypothetical protein YxiM {Bacillus subtilis [TaxI | 96.89 |
| >d2o14a1 b.18.1.32 (A:14-159) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Galactose-binding domain-like superfamily: Galactose-binding domain-like family: YxiM N-terminal domain-like domain: Hypothetical protein YxiM species: Bacillus subtilis [TaxId: 1423]
Probab=96.92 E-value=0.0085 Score=47.94 Aligned_cols=83 Identities=17% Similarity=0.187 Sum_probs=59.5
Q ss_pred CCCceEEEeecCCCeEEEEEEEecCCCCCCCCCCeEEEEeCCcEEEEEEeCCCCcceeEEEEEEEeeCCcEEEEEEecCC
Q 018717 58 RKKNCYSFKVDEGERVLVRASFYYGNYDRKNSPPVFDLQFDGNFWTTVNTSLRSYDVLSYEAIYVVKRNFTSICVAQTKP 137 (351)
Q Consensus 58 ~~~~cY~~~v~~g~~ylVRl~F~ygnyd~~~~~~~Fdv~~~~~~~~tv~~~~~~~~~~~~E~i~~~~~~~l~vcf~~~~~ 137 (351)
+....|.++++.| .|.|+++|-- . ...++.+.+..-.. +.. +....+.+.+.++++.|.|.|+....
T Consensus 62 ~~~~~f~v~vPnG-~Y~Vtv~~Gd------~--~~~~~~~eg~~~~~-~~~---g~~~~~~~~V~VtDG~L~l~ft~~~~ 128 (146)
T d2o14a1 62 KSNNTFNVDLPNG-LYEVKVTLGN------T--ARASVAAEGVFQVI-NMT---GDGAEDTFQIPVTDGQLNLLVTEGKA 128 (146)
T ss_dssp TCSCCEEEECCSE-EEEEEEEESS------C--SEEEEEETTEEEEE-EEE---STTCEEEEEEEECSSEEEEEEEESST
T ss_pred CCCceEEEECCCC-eEEEEEEEec------C--CCccEEEeeEEecc-ccC---CccEEEEEEEEEECCeEEEEEecCCC
Confidence 3345899999877 9999999873 1 34567776643111 111 13445778889999999999986654
Q ss_pred CCCCeeEEEEEEEcCC
Q 018717 138 GQLPFISAIEVRSLGI 153 (351)
Q Consensus 138 ~s~pFIsaiEl~~l~~ 153 (351)
|..|-||+|||.++++
T Consensus 129 G~~~~in~l~I~~~~d 144 (146)
T d2o14a1 129 GTAFTLSALKIKKLSD 144 (146)
T ss_dssp TSCCEEEEEEEEEEES
T ss_pred CCccEEEEEEEEeccc
Confidence 5689999999998765
|
| >d2o14a1 b.18.1.32 (A:14-159) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|