Citrus Sinensis ID: 018732


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-
MLKITPLISIFVLLYYPSTVRGECTCDVEDTEQNNGEALKFKLAAIATILVAGALGVSLPLLGKKIPALRPENDVFFMVKAFAAGVILATGFVHILPEAFDSLTSPCLGENPWGNFPFTGLVAMMSAIGTLMIDSFATGYYKRQHFDKSRPQLVDEEMADDHSGHVHVHTHATHGHAHGSADSPQELALPELIRKRVVSQVLEIGIVVHSVIIGISLGASEDLDIIKPLLAALSFHQFFEGMGLGGCISQAKFKSRSMAIMATFFSLTTPVGIAIGIGISSVYEENSPTALIVEGIFNSASAGILIYMALVDLLAADFMNPILQSNSRLQLGANASLLLGAGCMSVLAKWA
ccccHHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHcccHHHHHHHccccHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHccccEEcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHEEEEEccccccccEEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHcc
cHHHHHHHHHHHHHHcHHccHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHcHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHcEEEEEEEEEEEcccccccccHHHHHHHHHHHHHHHcccccHHHHHcccccccHHHEHHHHHHHcHHHHHHHHEEccccccccccHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHc
MLKITPLISIFVLLyypstvrgectcdvedteqnnGEALKFKLAAIATILVAGALGvslpllgkkipalrpendVFFMVKAFAAGVILATGFVHilpeafdsltspclgenpwgnfpfTGLVAMMSAIGTLMIDSFAtgyykrqhfdksrpqlvdeemaddhsghvhvhthathghahgsadspqelalpELIRKRVVSQVLEIGIVVHSVIIGIslgasedlDIIKPLLAALSFHQFfegmglggcisqakfKSRSMAIMATFFSLTTPVGIAIGIGISsvyeensptaLIVEGIFNSASAGILIYMALVDLLAADfmnpilqsnsrlqlgANASLLLGAGCMSVLAKWA
MLKITPLISIFVLLYYPSTVRGECTCDVEDTEQNNGEALKFKLAAIATILVAGALGVSLPLLGKKIPALRPENDVFFMVKAFAAGVILATGFVHILPEAFDSLTSPCLGENPWGNFPFTGLVAMMSAIGTLMIDSFATGYYKRQHFDKSRPQLVDEEMADDHSGHVHVHTHATHGHAHGSADSPQELALPELIRKRVVSQVLEIGIVVHSVIIGISLGASEDLDIIKPLLAALSFHQFFEGMGLGGCISQAKFKSRSMAIMATFFSLTTPVGIAIGIGISSVYEENSPTALIVEGIFNSASAGILIYMALVDLLAADFMNPILQSNSRLQLGANASLLLGAGCMSVLAKWA
MLKITPLISIFVLLYYPSTVRGECTCDVEDTEQNNGEALKFKLAAIATILVAGALGVSLPLLGKKIPALRPENDVFFMVKAFAAGVILATGFVHILPEAFDSLTSPCLGENPWGNFPFTGLVAMMSAIGTLMIDSFATGYYKRQHFDKSRPQLVDEEMAddhsghvhvhthathghahgsadsPQELALPELIRKRVVSQVLEigivvhsviigisLGASEDLDIIKPLLAALSFHQFFEGMGLGGCISQAKFKSRSMAIMATFFSLTTPVgiaigigiSSVYEENSPTALIVEGIFNSASAGILIYMALVDLLAADFMNPILQSNSRlqlganaslllgagCMSVLAKWA
***ITPLISIFVLLYYPSTVRGECTCDVEDTEQNNGEALKFKLAAIATILVAGALGVSLPLLGKKIPALRPENDVFFMVKAFAAGVILATGFVHILPEAFDSLTSPCLGENPWGNFPFTGLVAMMSAIGTLMIDSFATGYYKRQHF*****************************************ALPELIRKRVVSQVLEIGIVVHSVIIGISLGASEDLDIIKPLLAALSFHQFFEGMGLGGCISQAKFKSRSMAIMATFFSLTTPVGIAIGIGISSVYEENSPTALIVEGIFNSASAGILIYMALVDLLAADFMNPILQSNSRLQLGANASLLLGAGCMSVLAK**
****TPLISIFVLLY*******************NGEALKFKLAAIATILVAGALGVSLPLLGKKIPALRPENDVFFMVKAFAAGVILATGFVHILPEAFDSLTSPCLGENPWGNFPFTGLVAMMSAIGTLMIDSFATGYYKRQHFDKSRPQLV****AD**SGHVHVHTHATHG******************RKRVVSQVLEIGIVVHSVIIGISLGASEDLDIIKPLLAALSFHQFFEGMGLGGCISQAKFKSRSMAIMATFFSLTTPVGIAIGIGISSVYEENSPTALIVEGIFNSASAGILIYMALVDLLAADFMNPILQSNSRLQLGANASLLLGAGCMSVLAKWA
MLKITPLISIFVLLYYPSTVRGECTCDVEDTEQNNGEALKFKLAAIATILVAGALGVSLPLLGKKIPALRPENDVFFMVKAFAAGVILATGFVHILPEAFDSLTSPCLGENPWGNFPFTGLVAMMSAIGTLMIDSFATGYYKRQHFDKSRPQLVDEEMADDHSGHVHV***************PQELALPELIRKRVVSQVLEIGIVVHSVIIGISLGASEDLDIIKPLLAALSFHQFFEGMGLGGCISQAKFKSRSMAIMATFFSLTTPVGIAIGIGISSVYEENSPTALIVEGIFNSASAGILIYMALVDLLAADFMNPILQSNSRLQLGANASLLLGAGCMSVLAKWA
MLKITPLISIFVLLYYPSTVRGECTCDVEDTEQNNGEALKFKLAAIATILVAGALGVSLPLLGKKIPALRPENDVFFMVKAFAAGVILATGFVHILPEAFDSLTSPCLGENPWGNFPFTGLVAMMSAIGTLMIDSFATGYYKRQHF******************************************LPELIRKRVVSQVLEIGIVVHSVIIGISLGASEDLDIIKPLLAALSFHQFFEGMGLGGCISQAKFKSRSMAIMATFFSLTTPVGIAIGIGISSVYEENSPTALIVEGIFNSASAGILIYMALVDLLAADFMNPILQSNSRLQLGANASLLLGAGCMSVLAKWA
ooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooo
ooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooo
ooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHiii
SSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHo
SSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MLKITPLISIFVLLYYPSTVRGECTCDVEDTEQNNGEALKFKLAAIATILVAGALGVSLPLLGKKIPALRPENDVFFMVKAFAAGVILATGFVHILPEAFDSLTSPCLGENPWGNFPFTGLVAMMSAIGTLMIDSFATGYYKRQHFDKSRPQLVDEEMADDHSGHVHVHTHATHGHAHGSADSPQELALPELIRKRVVSQVLEIGIVVHSVIIGISLGASEDLDIIKPLLAALSFHQFFEGMGLGGCISQAKFKSRSMAIMATFFSLTTPVGIAIGIGISSVYEENSPTALIVEGIFNSASAGILIYMALVDLLAADFMNPILQSNSRLQLGANASLLLGAGCMSVLAKWA
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query351 2.2.26 [Sep-21-2011]
O81123355 Zinc transporter 1 OS=Ara yes no 0.957 0.946 0.623 1e-120
O23039360 Zinc transporter 5 OS=Ara no no 0.920 0.897 0.575 1e-104
Q6L8G0353 Zinc transporter 5 OS=Ory yes no 0.971 0.966 0.533 1e-103
Q7XLD4364 Zinc transporter 3 OS=Ory no no 0.962 0.928 0.563 1e-100
Q9SLG3339 Zinc transporter 3 OS=Ara no no 0.868 0.899 0.547 2e-97
A3BI11390 Zinc transporter 8 OS=Ory no no 0.886 0.797 0.576 1e-96
Q6ZJ91396 Zinc transporter 4 OS=Ory no no 0.934 0.828 0.594 2e-92
Q75HB1374 Fe(2+) transport protein no no 0.886 0.831 0.540 1e-90
Q9FIS2355 Probable zinc transporter no no 0.957 0.946 0.523 2e-89
Q8W245364 Probable zinc transporter no no 0.974 0.939 0.473 8e-89
>sp|O81123|ZIP1_ARATH Zinc transporter 1 OS=Arabidopsis thaliana GN=ZIP1 PE=2 SV=1 Back     alignment and function desciption
 Score =  432 bits (1110), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 224/359 (62%), Positives = 271/359 (75%), Gaps = 23/359 (6%)

Query: 1   MLKITPLISIFVLLYYPSTVRGECTCDVEDTEQNNGE-ALKFKLAAIATILVAGALGVSL 59
           ML+I     + ++  +      +CT   +   Q+  E A K KL +IA +LVAG +GVSL
Sbjct: 12  MLRICV---VLIICLHMCCASSDCTSHDDPVSQDEAEKATKLKLGSIALLLVAGGVGVSL 68

Query: 60  PLLGKKIPALRPENDVFFMVKAFAAGVILATGFVHILPEAFDSLTSPCLGENPWGNFPFT 119
           PL+GK+IPAL+PEND+FFMVKAFAAGVIL TGFVHILP+AF+ L+SPCL +   G FPF 
Sbjct: 69  PLIGKRIPALQPENDIFFMVKAFAAGVILCTGFVHILPDAFERLSSPCLEDTTAGKFPFA 128

Query: 120 GLVAMMSAIGTLMIDSFATGYYKRQHF-----DKSRPQLVDEEMADDHSGHVHVHTHATH 174
           G VAM+SA+GTLMID+FATGYYKRQHF      K    +VDEE   +H+GHVH+HTHA+H
Sbjct: 129 GFVAMLSAMGTLMIDTFATGYYKRQHFSNNHGSKQVNVVVDEE---EHAGHVHIHTHASH 185

Query: 175 GHAHGSADSPQELALPELIRKRVVSQVLEIGIVVHSVIIGISLGASEDLDIIKPLLAALS 234
           GH HGS          ELIR+R+VSQVLEIGIVVHSVIIGISLGAS+ +D IKPL+AALS
Sbjct: 186 GHTHGST---------ELIRRRIVSQVLEIGIVVHSVIIGISLGASQSIDTIKPLMAALS 236

Query: 235 FHQFFEGMGLGGCISQAKFKSRSMAIMATFFSLTTPVGIAIGIGISS--VYEENSPTALI 292
           FHQFFEG+GLGGCIS A  KS+S  +MATFFS+T P+GI IG+G+SS   Y + S  A++
Sbjct: 237 FHQFFEGLGLGGCISLADMKSKSTVLMATFFSVTAPLGIGIGLGMSSGLGYRKESKEAIM 296

Query: 293 VEGIFNSASAGILIYMALVDLLAADFMNPILQSNSRLQLGANASLLLGAGCMSVLAKWA 351
           VEG+ N+ASAGILIYM+LVDLLA DFMNP LQSN  L L A  SL+LGAG MS+LA WA
Sbjct: 297 VEGMLNAASAGILIYMSLVDLLATDFMNPRLQSNLWLHLAAYLSLVLGAGSMSLLAIWA 355




Mediates zinc uptake from the rhizosphere. May also transport copper and cadmium ions.
Arabidopsis thaliana (taxid: 3702)
>sp|O23039|ZIP5_ARATH Zinc transporter 5 OS=Arabidopsis thaliana GN=ZIP5 PE=2 SV=1 Back     alignment and function description
>sp|Q6L8G0|ZIP5_ORYSJ Zinc transporter 5 OS=Oryza sativa subsp. japonica GN=ZIP5 PE=2 SV=1 Back     alignment and function description
>sp|Q7XLD4|ZIP3_ORYSJ Zinc transporter 3 OS=Oryza sativa subsp. japonica GN=ZIP3 PE=1 SV=2 Back     alignment and function description
>sp|Q9SLG3|ZIP3_ARATH Zinc transporter 3 OS=Arabidopsis thaliana GN=ZIP3 PE=2 SV=1 Back     alignment and function description
>sp|A3BI11|ZIP8_ORYSJ Zinc transporter 8 OS=Oryza sativa subsp. japonica GN=ZIP8 PE=2 SV=1 Back     alignment and function description
>sp|Q6ZJ91|ZIP4_ORYSJ Zinc transporter 4 OS=Oryza sativa subsp. japonica GN=ZIP4 PE=2 SV=1 Back     alignment and function description
>sp|Q75HB1|IRT1_ORYSJ Fe(2+) transport protein 1 OS=Oryza sativa subsp. japonica GN=IRT1 PE=2 SV=1 Back     alignment and function description
>sp|Q9FIS2|ZIP12_ARATH Probable zinc transporter 12 OS=Arabidopsis thaliana GN=ZIP12 PE=3 SV=1 Back     alignment and function description
>sp|Q8W245|ZIP10_ARATH Probable zinc transporter 10 OS=Arabidopsis thaliana GN=ZIP10 PE=3 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query351
388508230358 unknown [Medicago truncatula] 0.982 0.963 0.698 1e-143
224109078342 ZIP transporter [Populus trichocarpa] gi 0.968 0.994 0.765 1e-143
356557040359 PREDICTED: zinc transporter 1-like [Glyc 0.965 0.944 0.749 1e-139
224101319360 ZIP transporter [Populus trichocarpa] gi 0.997 0.972 0.735 1e-138
255648389359 unknown [Glycine max] 0.965 0.944 0.737 1e-136
359494680360 PREDICTED: zinc transporter 1 isoform 2 0.954 0.930 0.754 1e-135
255582726359 zinc/iron transporter, putative [Ricinus 0.957 0.935 0.672 1e-135
147835350360 hypothetical protein VITISV_008114 [Viti 0.954 0.930 0.751 1e-135
147835351360 hypothetical protein VITISV_008115 [Viti 0.954 0.930 0.751 1e-135
359494678360 PREDICTED: zinc transporter 1 isoform 1 0.954 0.930 0.751 1e-134
>gi|388508230|gb|AFK42181.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
 Score =  514 bits (1323), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 243/348 (69%), Positives = 297/348 (85%), Gaps = 3/348 (0%)

Query: 7   LISIFVLLYYPSTVRGE-CTCDVEDTEQNN--GEALKFKLAAIATILVAGALGVSLPLLG 63
           L+  +V+   P  V  + C C+ E T++N+   EAL +KL +IA++LV GALGVSLPLL 
Sbjct: 11  LLFFYVIFILPILVSCDSCKCETEQTKENSEKNEALHYKLGSIASVLVCGALGVSLPLLS 70

Query: 64  KKIPALRPENDVFFMVKAFAAGVILATGFVHILPEAFDSLTSPCLGENPWGNFPFTGLVA 123
           K+IP L P+ND+FFM+KAFAAGVILATGF+HILP+AF+SL SPCL E PWG+FP  GLVA
Sbjct: 71  KRIPILSPKNDIFFMIKAFAAGVILATGFIHILPDAFESLNSPCLKEKPWGDFPLAGLVA 130

Query: 124 MMSAIGTLMIDSFATGYYKRQHFDKSRPQLVDEEMADDHSGHVHVHTHATHGHAHGSADS 183
           M+S+I TLM+DSFA+ YY+++HF+ S+    DEE  D+H GHVHVHT ATHGHAHGSA S
Sbjct: 131 MLSSIATLMVDSFASSYYQKRHFNPSKQVPADEEKGDEHVGHVHVHTRATHGHAHGSATS 190

Query: 184 PQELALPELIRKRVVSQVLEIGIVVHSVIIGISLGASEDLDIIKPLLAALSFHQFFEGMG 243
            Q+   PELIR+R++SQVLE+GIVVHSVIIGISLG ++ +D IKPLL ALSFHQFFEGMG
Sbjct: 191 SQDSISPELIRQRIISQVLELGIVVHSVIIGISLGTAQSIDTIKPLLVALSFHQFFEGMG 250

Query: 244 LGGCISQAKFKSRSMAIMATFFSLTTPVGIAIGIGISSVYEENSPTALIVEGIFNSASAG 303
           LGGCISQAKF+SRS AIMATFFSLTTP+GIAIG+G+SSVY++NSPT+LIVEG+FNSASAG
Sbjct: 251 LGGCISQAKFESRSTAIMATFFSLTTPIGIAIGMGVSSVYKDNSPTSLIVEGVFNSASAG 310

Query: 304 ILIYMALVDLLAADFMNPILQSNSRLQLGANASLLLGAGCMSVLAKWA 351
           ILIYMALVDLLAADFM+P +Q+N ++Q+GAN SLLLG+GCMS+LAKWA
Sbjct: 311 ILIYMALVDLLAADFMSPRMQNNFKIQIGANISLLLGSGCMSLLAKWA 358




Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224109078|ref|XP_002315075.1| ZIP transporter [Populus trichocarpa] gi|222864115|gb|EEF01246.1| ZIP transporter [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356557040|ref|XP_003546826.1| PREDICTED: zinc transporter 1-like [Glycine max] Back     alignment and taxonomy information
>gi|224101319|ref|XP_002312231.1| ZIP transporter [Populus trichocarpa] gi|222852051|gb|EEE89598.1| ZIP transporter [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255648389|gb|ACU24645.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|359494680|ref|XP_003634821.1| PREDICTED: zinc transporter 1 isoform 2 [Vitis vinifera] Back     alignment and taxonomy information
>gi|255582726|ref|XP_002532140.1| zinc/iron transporter, putative [Ricinus communis] gi|223528176|gb|EEF30239.1| zinc/iron transporter, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|147835350|emb|CAN72264.1| hypothetical protein VITISV_008114 [Vitis vinifera] Back     alignment and taxonomy information
>gi|147835351|emb|CAN72265.1| hypothetical protein VITISV_008115 [Vitis vinifera] Back     alignment and taxonomy information
>gi|359494678|ref|XP_002264603.2| PREDICTED: zinc transporter 1 isoform 1 [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query351
TAIR|locus:2087705355 ZIP1 "zinc transporter 1 precu 0.940 0.929 0.508 8.5e-81
UNIPROTKB|Q6ZJ91396 ZIP4 "Zinc transporter 4" [Ory 0.478 0.424 0.541 2.8e-78
UNIPROTKB|A3BI11390 ZIP8 "Zinc transporter 8" [Ory 0.452 0.407 0.572 2.5e-77
TAIR|locus:2207140360 ZIP5 "zinc transporter 5 precu 0.458 0.447 0.527 4.1e-77
TAIR|locus:2062576339 ZIP3 "zinc transporter 3 precu 0.458 0.474 0.503 1.8e-74
UNIPROTKB|Q7XLD4364 ZIP3 "Zinc transporter 3" [Ory 0.968 0.934 0.481 6.5e-74
UNIPROTKB|Q6L8G0353 ZIP5 "Zinc transporter 5" [Ory 0.988 0.983 0.440 3.6e-73
UNIPROTKB|Q75HB1374 IRT1 "Fe(2+) transport protein 0.886 0.831 0.459 2.8e-66
UNIPROTKB|Q6L8G1370 IRT2 "Fe(2+) transport protein 0.458 0.435 0.484 4.2e-65
TAIR|locus:2133965347 IRT1 "iron-regulated transport 0.458 0.463 0.472 7.7e-64
TAIR|locus:2087705 ZIP1 "zinc transporter 1 precursor" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 811 (290.5 bits), Expect = 8.5e-81, P = 8.5e-81
 Identities = 178/350 (50%), Positives = 218/350 (62%)

Query:    10 IFVLLYYPSTVRGECTCDVEDTEQNNGE-ALKFKLAAIATILVAGALGVSLPLLGKKIPA 68
             + ++  +      +CT   +   Q+  E A K KL +IA +LVAG +GVSLPL+GK+IPA
Sbjct:    18 VLIICLHMCCASSDCTSHDDPVSQDEAEKATKLKLGSIALLLVAGGVGVSLPLIGKRIPA 77

Query:    69 LRPENDVFFMVKAFAAGVILATGFVHILPEAFDSLTSPCLGENPWGNFPFTGLVAMMSAI 128
             L+PEND+FFMVKAFAAGVIL TGFVHILP+AF+ L+SPCL +   G FPF G VAM+SA+
Sbjct:    78 LQPENDIFFMVKAFAAGVILCTGFVHILPDAFERLSSPCLEDTTAGKFPFAGFVAMLSAM 137

Query:   129 GTLMIDSFATGYYKRQHFDKSRPQ-----LVDEEMAXXXXXXXXXXXXXXXXXXXXXXXX 183
             GTLMID+FATGYYKRQHF  +        +VDEE                          
Sbjct:   138 GTLMIDTFATGYYKRQHFSNNHGSKQVNVVVDEEEHAGHVHIHTHASHGHTHGST----- 192

Query:   184 PQELALPELIRKRVVSQVLEXXXXXXXXXXXXXLGASEDLDIIKPLLAALSFHQFFEGMG 243
                    ELIR+R+VSQVLE             LGAS+ +D IKPL+AALSFHQFFEG+G
Sbjct:   193 -------ELIRRRIVSQVLEIGIVVHSVIIGISLGASQSIDTIKPLMAALSFHQFFEGLG 245

Query:   244 LGGCISQAKFKSRSMAIMATFFSLTTPVXXXXXXXXSSV--YEENSPTALIVEGIFNSAS 301
             LGGCIS A  KS+S  +MATFFS+T P+        SS   Y + S  A++VEG+ N+AS
Sbjct:   246 LGGCISLADMKSKSTVLMATFFSVTAPLGIGIGLGMSSGLGYRKESKEAIMVEGMLNAAS 305

Query:   302 AGILIYMALVDLLAADFMNPILQSNSRXXXXXXXXXXXXXXCMSVLAKWA 351
             AGILIYM+LVDLLA DFMNP LQSN                 MS+LA WA
Sbjct:   306 AGILIYMSLVDLLATDFMNPRLQSNLWLHLAAYLSLVLGAGSMSLLAIWA 355




GO:0005385 "zinc ion transmembrane transporter activity" evidence=IEA;ISS;IDA;TAS
GO:0005886 "plasma membrane" evidence=ISM
GO:0006829 "zinc ion transport" evidence=ISS;TAS
GO:0010043 "response to zinc ion" evidence=NAS
GO:0016020 "membrane" evidence=IEA
GO:0016021 "integral to membrane" evidence=IEA
GO:0030001 "metal ion transport" evidence=IEA
GO:0046873 "metal ion transmembrane transporter activity" evidence=IEA
GO:0055085 "transmembrane transport" evidence=IEA
GO:0071577 "zinc ion transmembrane transport" evidence=IEA
GO:0006826 "iron ion transport" evidence=RCA
GO:0006833 "water transport" evidence=RCA
GO:0010106 "cellular response to iron ion starvation" evidence=RCA
UNIPROTKB|Q6ZJ91 ZIP4 "Zinc transporter 4" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
UNIPROTKB|A3BI11 ZIP8 "Zinc transporter 8" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
TAIR|locus:2207140 ZIP5 "zinc transporter 5 precursor" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2062576 ZIP3 "zinc transporter 3 precursor" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q7XLD4 ZIP3 "Zinc transporter 3" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
UNIPROTKB|Q6L8G0 ZIP5 "Zinc transporter 5" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
UNIPROTKB|Q75HB1 IRT1 "Fe(2+) transport protein 1" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
UNIPROTKB|Q6L8G1 IRT2 "Fe(2+) transport protein 2" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
TAIR|locus:2133965 IRT1 "iron-regulated transporter 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q6L8G0ZIP5_ORYSJNo assigned EC number0.53350.97150.9660yesno
O81123ZIP1_ARATHNo assigned EC number0.62390.95720.9464yesno
P32804ZRT1_YEASTNo assigned EC number0.30700.89450.8351yesno

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query351
TIGR00820324 TIGR00820, zip, ZIP zinc/iron transport family 1e-156
PLN02159337 PLN02159, PLN02159, Fe(2+) transport protein 1e-107
pfam02535314 pfam02535, Zip, ZIP Zinc transporter 2e-78
COG0428266 COG0428, COG0428, Predicted divalent heavy-metal c 3e-06
cd10915403 cd10915, Peptidase_C25_N_2, uncharacterized subgro 0.002
>gnl|CDD|233141 TIGR00820, zip, ZIP zinc/iron transport family Back     alignment and domain information
 Score =  441 bits (1135), Expect = e-156
 Identities = 198/333 (59%), Positives = 251/333 (75%), Gaps = 16/333 (4%)

Query: 26  CDVEDTE-QNNGE-ALKFKLAAIATILVAGALGVSLPLLGKKIPALRPENDVFFMVKAFA 83
           C  ED    NN E ALK K+ AI +IL+A  +GV  PL+GK +P+LRPE + FF+ KAFA
Sbjct: 1   CSHEDDNSCNNKEGALKLKIVAIFSILLASVIGVMFPLIGKNVPSLRPEGNFFFVAKAFA 60

Query: 84  AGVILATGFVHILPEAFDSLTSPCLGENPWGNFPFTGLVAMMSAIGTLMIDSFATGYYKR 143
           AGVILATGF+H+LPEAF+ L+SPCL   PWG FPF G +AM+SAI TL++D FAT YY+R
Sbjct: 61  AGVILATGFMHVLPEAFEMLSSPCLESTPWGKFPFAGFIAMISAILTLLVDLFATSYYER 120

Query: 144 QHFDKSRPQLVDEEMAD-----DHSGHVHVHTHATHGHAHGSADSPQELALPELIRKRVV 198
           +H    +     +E+         +G           H H +++  Q      L+R+RVV
Sbjct: 121 KHG---KGDHGSKEIKVGDGEEGTAGGTKHGHEYYEDHVHTNSEVVQ------LLRQRVV 171

Query: 199 SQVLEIGIVVHSVIIGISLGASEDLDIIKPLLAALSFHQFFEGMGLGGCISQAKFKSRSM 258
           +QVLE+GI+VHSV+IG+SLGAS+  D IKPL+AALSFHQFFEG+GLGGCISQA+FK +S+
Sbjct: 172 AQVLELGIIVHSVVIGLSLGASQSPDTIKPLIAALSFHQFFEGLGLGGCISQAEFKCKSV 231

Query: 259 AIMATFFSLTTPVGIAIGIGISSVYEENSPTALIVEGIFNSASAGILIYMALVDLLAADF 318
            IM TFF++TTP+GIAIG+GISS Y+++SPTALIVEG+ N+ASAGILIYMALVDLLAADF
Sbjct: 232 TIMCTFFAVTTPLGIAIGMGISSSYDDSSPTALIVEGVLNAASAGILIYMALVDLLAADF 291

Query: 319 MNPILQSNSRLQLGANASLLLGAGCMSVLAKWA 351
           M+P +QSN RLQ+ A  +LLLGAG MS+LAKWA
Sbjct: 292 MHPKMQSNLRLQIMAYIALLLGAGLMSLLAKWA 324


The Zinc (Zn2+)-Iron (Fe2+) Permease (ZIP) Family (TC 2.A.5)Members of the ZIP family consist of proteins with eight putative transmembrane spanners. They are derived from animals, plants and yeast. Theycomprise a diverse family, with several paralogues in any one organism (e.g., at least five in Caenorabditis elegans, at least five in Arabidopsis thaliana and two inSaccharomyces cervisiae. The two S. cerevisiae proteins, Zrt1 and Zrt2, both probably transport Zn2+ with high specificity, but Zrt1 transports Zn2+ with ten-fold higher affinitythan Zrt2. Some members of the ZIP family have been shown to transport Zn2+ while others transport Fe2+, and at least one transports a range of metal ions. The energy source fortransport has not been characterized, but these systems probably function as secondary carriers [Transport and binding proteins, Cations and iron carrying compounds]. Length = 324

>gnl|CDD|177818 PLN02159, PLN02159, Fe(2+) transport protein Back     alignment and domain information
>gnl|CDD|217089 pfam02535, Zip, ZIP Zinc transporter Back     alignment and domain information
>gnl|CDD|223505 COG0428, COG0428, Predicted divalent heavy-metal cations transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|199213 cd10915, Peptidase_C25_N_2, uncharacterized subgroup of the Peptidase C25 family N-terminal domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 351
KOG1558327 consensus Fe2+/Zn2+ regulated transporter [Inorgan 100.0
TIGR00820324 zip ZIP zinc/iron transport family. transport has 100.0
PLN02159337 Fe(2+) transport protein 100.0
PF02535317 Zip: ZIP Zinc transporter; InterPro: IPR003689 The 100.0
PRK04201265 zinc transporter ZupT; Provisional 100.0
COG0428266 Predicted divalent heavy-metal cations transporter 99.94
KOG2693453 consensus Putative zinc transporter [Inorganic ion 99.93
KOG2694361 consensus Putative zinc transporter [Inorganic ion 99.92
KOG3907303 consensus ZIP-like zinc transporter proteins [Intr 99.82
KOG2474406 consensus Zinc transporter and related ZIP domain- 98.66
PRK04201 265 zinc transporter ZupT; Provisional 98.04
PF02535317 Zip: ZIP Zinc transporter; InterPro: IPR003689 The 95.2
COG0428266 Predicted divalent heavy-metal cations transporter 91.89
KOG1558327 consensus Fe2+/Zn2+ regulated transporter [Inorgan 88.4
TIGR00820324 zip ZIP zinc/iron transport family. transport has 84.76
PRK11469188 hypothetical protein; Provisional 81.71
>KOG1558 consensus Fe2+/Zn2+ regulated transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
Probab=100.00  E-value=2.2e-61  Score=456.50  Aligned_cols=322  Identities=46%  Similarity=0.771  Sum_probs=265.0

Q ss_pred             cCCCcccccccchhhHHHHHHHHHHHHHHHHcHHhhhccccCCCCCCchHHHHHHHhhhhHHHHhhHHhccHhhHHhccC
Q 018732           26 CDVEDTEQNNGEALKFKLAAIATILVAGALGVSLPLLGKKIPALRPENDVFFMVKAFAAGVILATGFVHILPEAFDSLTS  105 (351)
Q Consensus        26 ~~~~~~~~~~~~~l~~ki~~~~~i~~~sllg~~lP~~~~~~~~~~~~~~~l~~l~~fa~GvlL~~aflhLLPea~e~~~~  105 (351)
                      |...+.++|+...+.+|+++++++|+.|++|+++|++.++.+..+.+++.+++..||++||+|+|+|+|+|||++|.+++
T Consensus         3 ~~~~~~~~~~~~~~~lKi~ai~vil~~s~i~~~~Pl~~~~~~~~~~~~~~~~~~kcFa~GViLaT~FlH~Lpd~~E~l~~   82 (327)
T KOG1558|consen    3 CQAPASCADKMGALLLKIVAIFVILLLSLIGGLLPLFVRRTSALQPESRFLSLVKCFAGGVILATGFLHLLPDAFEALES   82 (327)
T ss_pred             ccccccccchhhhhhHHHHHHHHHHHHHHHHhcchHhhccccccCCccchHHHHHHHhccHHHHHHHHHhChhHHHHhhc
Confidence            33337788888899999999999999999999999998886666778999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCccccccccCC-CCccccCcCCCCCCCCCCCCC-
Q 018732          106 PCLGENPWGNFPFTGLVAMMSAIGTLMIDSFATGYYKRQHFDKSRPQLVDEEMADDH-SGHVHVHTHATHGHAHGSADS-  183 (351)
Q Consensus       106 ~~~~~~~~~~~P~~~~~~~~Gf~l~~llE~~~~~~~~~~~~~~~~~~~~d~e~~~~~-~~~~~~~~~~~~~~~~~~~~~-  183 (351)
                      .|...+.|.+|||+++++++||++++++|.+.+.++++++.++.+....+.|.+++. ..+.+.|...+++|+|.+..+ 
T Consensus        83 ~~~~~~~~~~fp~~~~i~~~gf~l~l~id~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (327)
T KOG1558|consen   83 LCLADNPWGKFPFAEFIAMLGFFLTLLIDEITTSYVGHGHSHKKRNEVAVSEEGEDLRAVGNGEHGAIHVGHSHGHSEPS  162 (327)
T ss_pred             ccccCCCCcCCChHHHHHHHHHHHHHHHHHHHHHHhcCCCccccccccCCcCcCcccccccccCCccccCCCCCCCCCCC
Confidence            998888999999999999999999999999999887555432211111111111110 000011100001222222211 


Q ss_pred             -CCccchhHHHHhHHHHHHHHHHHHhhhhhhHhHhhcccccchhHHHHHHHHHhhHHHHHhHHHHhhhcCCChHHHHHHH
Q 018732          184 -PQELALPELIRKRVVSQVLEIGIVVHSVIIGISLGASEDLDIIKPLLAALSFHQFFEGMGLGGCISQAKFKSRSMAIMA  262 (351)
Q Consensus       184 -~~~~~~~~~~~~~~~~~ll~~al~iHs~~eGlalG~~~~~~~~~~l~~AI~~Hk~~e~~alg~~L~~~~~s~~~~~~~~  262 (351)
                       .+.+++.+.  +++.++++++|+++||++||+++|++++.+.++.++.|+.+||.+|||++|.++.+++.+.++.++++
T Consensus       163 ~~~~~~~~~~--~~~~~~iL~lgi~~HSvfeGlalGv~~~~~ti~~L~~al~fHk~fegf~lG~~l~~a~~~~~~~~~~~  240 (327)
T KOG1558|consen  163 TPGVVDDGQA--SRLRSLILELGLSFHSVFEGLALGVQDSVSTIWTLFLALSFHKLFEGFGLGGCLLQAGFTFKSAVLMA  240 (327)
T ss_pred             Cccccchhhh--hhHHHHHHHHHHHHHHHHHhhhccccCCHHHHHHHHHHHHHHHHHHHhcccHHHhhcccchHHHHHHH
Confidence             111111111  45668899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhhcccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhhcCccccCchHHHHHHHHHHHHHHH
Q 018732          263 TFFSLTTPVGIAIGIGISSVYEENSPTALIVEGIFNSASAGILIYMALVDLLAADFMNPILQSNSRLQLGANASLLLGAG  342 (351)
Q Consensus       263 ~~fsl~tPlG~~IG~~i~~~~~~~s~~~~~~~gil~alaaGtflYVa~~ElLp~e~~~~~~~~~~~~~~~~~~~~~lG~~  342 (351)
                      +.||++||+|+++|+++.+.| +++++.++++++|+|+|+|||+||+++|+||+|+.+++.+. .|.++.+++++++|++
T Consensus       241 ~~fslttPiGi~iG~~i~~~~-~~s~~~~i~~gvL~alAaGtliY~~lvElla~ef~~~~~~~-~~~~i~~~i~~~~G~a  318 (327)
T KOG1558|consen  241 LFFSLTTPIGIALGIGISSSY-ENSPGALITSGVLEALAAGTLIYVALVELLAAEFANPKMQS-LKLQILKLIALLLGFA  318 (327)
T ss_pred             HHHHHHhHHHHHHHHHhcccc-cCCchhHHHHHHHHHHhhhHhHHHHHHHHhHHHhcCchhhh-HHHHHHHHHHHHHhHH
Confidence            999999999999999999988 68899999999999999999999999999999999988776 7788999999999999


Q ss_pred             HHHHHHhcC
Q 018732          343 CMSVLAKWA  351 (351)
Q Consensus       343 ~ma~i~~w~  351 (351)
                      +|+++++|+
T Consensus       319 lms~l~~wa  327 (327)
T KOG1558|consen  319 LMSLLAIWA  327 (327)
T ss_pred             HHHHHHHhC
Confidence            999999997



>TIGR00820 zip ZIP zinc/iron transport family Back     alignment and domain information
>PLN02159 Fe(2+) transport protein Back     alignment and domain information
>PF02535 Zip: ZIP Zinc transporter; InterPro: IPR003689 These ZIP zinc transporter proteins define a family of metal ion transporters that are found in plants, protozoa, fungi, invertebrates, and vertebrates, making it now possible to address questions of metal ion accumulation and homeostasis in diverse organisms [] Back     alignment and domain information
>PRK04201 zinc transporter ZupT; Provisional Back     alignment and domain information
>COG0428 Predicted divalent heavy-metal cations transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG2693 consensus Putative zinc transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG2694 consensus Putative zinc transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG3907 consensus ZIP-like zinc transporter proteins [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG2474 consensus Zinc transporter and related ZIP domain-containing proteins [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK04201 zinc transporter ZupT; Provisional Back     alignment and domain information
>PF02535 Zip: ZIP Zinc transporter; InterPro: IPR003689 These ZIP zinc transporter proteins define a family of metal ion transporters that are found in plants, protozoa, fungi, invertebrates, and vertebrates, making it now possible to address questions of metal ion accumulation and homeostasis in diverse organisms [] Back     alignment and domain information
>COG0428 Predicted divalent heavy-metal cations transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG1558 consensus Fe2+/Zn2+ regulated transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR00820 zip ZIP zinc/iron transport family Back     alignment and domain information
>PRK11469 hypothetical protein; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00