Citrus Sinensis ID: 018781

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350
MAFFSHSKLLLLSLSLSLFACSSLAHDFSIVGYSPEHLTSMDKLIELFESWMSKHGKTYKCIEEKLHRFEIFKENLKHIDQRNKEVTSYWLGLNEFADMSHEEFKNKYLGLKPQFPTRRQPSAEFSYRDVKALPKSVDWRKKGAVTPVKNQGSCGSCWAFSTVAAVEGINQIVSGNLTSLSEQELIDCDTSFNNGCNGGLMDYAFKYIVASGGLHKEEDYPYLMEEGTCEDKKEEMEVVTISGYQDVPENDEQSLLKALAHQPVSVAIEASGTDFQFYSGGVFTGPCGAELDHGVAAVGYGKSKGSDYIIVKNSWGPKWGERGYIRMKRNTGKPEGLCGINKMASIPLKK
cccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHcccccEEEcccccccccHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHcccccccccHHcccccccccccccccHHHHHHHHHHccccccccccccccccccccccccccccEEEccEEEcccccHHHHHHHHHccccEEEEEccccccccccccEEcccccccccEEEEEEEccccccccEEEEEcccccccccccEEEEEcccccccccccccccccccccc
cccccHHHHHHHHHHHHHHHHHHHHccccEccccHHccccHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEcccccccHHHHHHHHcccccccccccccccccEccccccccccEEccccccccccccccccccHHHHHHHHHHHHHHHHHHcccccEcHHHHHHHcEccEcccEcccHHHHHHHHHHHccEcEccccccccccccccHHHHHcccEcccEEEEcccccHHHHHHHHHHccEEEEEccccHHHHHccccEEcccccccccEEEEEEEEEEEccEEEEEEEccEcccccEccEEEEEccccccccHHHcccccEEEEcc
maffshskLLLLSLSLSLFAcsslahdfsivgyspehltSMDKLIELFESWmskhgktykcIEEKLHRFEIFKENLKHIDQRNKEVTSYWLGLNEFADMSHEEfknkylglkpqfptrrqpsaefsyrdvkalpksvdwrkkgavtpvknqgscgscwaFSTVAAVEGINQIVSgnltslseqelidcdtsfnngcngglmDYAFKYIVAsgglhkeedypylmeegtcedkkeEMEVVTIsgyqdvpenDEQSLLKALAHqpvsvaieasgtdfqfysggvftgpcgaeldhgvaavgygkskgsdyiivknswgpkwgergyirmkrntgkpeglcginkmasiplkk
MAFFSHSKLLLLSLSLSLFACSSLAHDFSIVGYSPEHLTSMDKLIELFESWMSKHGKTYKCIEEKLHRFEIFKENLKHIDQRNKEVTSYWLGLNEFADMSHEEFKNKYLGlkpqfptrrqpsaefsyrdvkalpksvdwrkkgavtpvknqgscgSCWAFSTVAAVEGINQIVSGNLTSLSEQELIDCDTSFNNGCNGGLMDYAFKYIVASGGLHKEEDYPYLMEEGTCEDKKEEMEVVTISGYQDVPENDEQSLLKALAHQPVSVAIEASGTDFQFYSGGVFTGPCGAELDHGVAAVGygkskgsdyiivknswgpkwgergyirmkrntgkpeglcginkmasiplkk
MaffshskllllslslslfacsslaHDFSIVGYSPEHLTSMDKLIELFESWMSKHGKTYKCIEEKLHRFEIFKENLKHIDQRNKEVTSYWLGLNEFADMSHEEFKNKYLGLKPQFPTRRQPSAEFSYRDVKALPKSVDWRKKGAVTPVKNQGSCGSCWAFSTVAAVEGINQIVSGNLTSLSEQELIDCDTSFNNGCNGGLMDYAFKYIVASGGLHKEEDYPYLMEEGTCEDKKEEMEVVTISGYQDVPENDEQSLLKALAHQPVSVAIEASGTDFQFYSGGVFTGPCGAELDHGVAAVGYGKSKGSDYIIVKNSWGPKWGERGYIRMKRNTGKPEGLCGINKMASIPLKK
***FSHSKLLLLSLSLSLFACSSLAHDFSIVGYSPEHLTSMDKLIELFESWMSKHGKTYKCIEEKLHRFEIFKENLKHIDQRNKEVTSYWLGLNEFADMSHEEFKNKYLGL***************YRDVKALPKSVDWRKKGAVTPVKNQGSCGSCWAFSTVAAVEGINQIVSGNLTSLSEQELIDCDTSFNNGCNGGLMDYAFKYIVASGGLHKEEDYPYLMEEGTC********VVTISGY**********LLKALAHQPVSVAIEASGTDFQFYSGGVFTGPCGAELDHGVAAVGYGKSKGSDYIIVKNSWGPKWGERGYIRMKRN******LCGI**********
********L**LSLSLSLFACSSLAHDFSIVGYSPEHLTSMDKLIELFESWMSKHGKTYKCIEEKLHRFEIFKENLKHIDQRNKEVTSYWLGLNEFADMSHEEFKNKYL********************VKALPKSVDWRKKGAVTPVKNQGSCGSCWAFSTVAAVEGINQIVSGNLTSLSEQELIDCDTSFNNGCNGGLMDYAFKYIVASGGLHKEEDYPYLMEEGTCEDKKEEMEVVTISGYQDVPENDEQSLLKALAHQPVSVAIEASGTDFQFYSGGVFTGPCGAELDHGVAAVGYGKSKGSDYIIVKNSWGPKWGERGYIRMKRNTGKPEGLCGINKMASIPLKK
MAFFSHSKLLLLSLSLSLFACSSLAHDFSIVGYSPEHLTSMDKLIELFESWMSKHGKTYKCIEEKLHRFEIFKENLKHIDQRNKEVTSYWLGLNEFADMSHEEFKNKYLGLKPQFPTRRQPSAEFSYRDVKALPKSVDWRKKGAVTPVKNQGSCGSCWAFSTVAAVEGINQIVSGNLTSLSEQELIDCDTSFNNGCNGGLMDYAFKYIVASGGLHKEEDYPYLMEEGTCEDKKEEMEVVTISGYQDVPENDEQSLLKALAHQPVSVAIEASGTDFQFYSGGVFTGPCGAELDHGVAAVGYGKSKGSDYIIVKNSWGPKWGERGYIRMKRNTGKPEGLCGINKMASIPLKK
**FFSHSKLLLLSLSLSLFACSSLAHDFSIVGYSPEHLTSMDKLIELFESWMSKHGKTYKCIEEKLHRFEIFKENLKHIDQRNKEVTSYWLGLNEFADMSHEEFKNKYLGL************EFSYRDVKALPKSVDWRKKGAVTPVKNQGSCGSCWAFSTVAAVEGINQIVSGNLTSLSEQELIDCDTSFNNGCNGGLMDYAFKYIVASGGLHKEEDYPYLMEEGTCEDKKEEMEVVTISGYQDVPENDEQSLLKALAHQPVSVAIEASGTDFQFYSGGVFTGPCGAELDHGVAAVGYGKSKGSDYIIVKNSWGPKWGERGYIRMKRNTGKPEGLCGINKMASIPLKK
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MAFFSHSKLLLLSLSLSLFACSSLAHDFSIVGYSPEHLTSMDKLIELFESWMSKHGKTYKCIEEKLHRFEIFKENLKHIDQRNKEVTSYWLGLNEFADMSHEEFKNKYLGLKPQFPTRRQPSAEFSYRDVKALPKSVDWRKKGAVTPVKNQGSCGSCWAFSTVAAVEGINQIVSGNLTSLSEQELIDCDTSFNNGCNGGLMDYAFKYIVASGGLHKEEDYPYLMEEGTCEDKKEEMEVVTISGYQDVPENDEQSLLKALAHQPVSVAIEASGTDFQFYSGGVFTGPCGAELDHGVAAVGYGKSKGSDYIIVKNSWGPKWGERGYIRMKRNTGKPEGLCGINKMASIPLKK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query350 2.2.26 [Sep-21-2011]
O65493355 Xylem cysteine proteinase yes no 0.971 0.957 0.774 1e-166
Q9LM66356 Xylem cysteine proteinase no no 0.925 0.910 0.776 1e-151
P14080352 Chymopapain OS=Carica pap N/A no 0.977 0.971 0.533 1e-104
P43297 462 Cysteine proteinase RD21a no no 0.985 0.746 0.512 1e-104
Q9FGR9361 KDEL-tailed cysteine endo no no 0.96 0.930 0.541 1e-102
P25776 458 Oryzain alpha chain OS=Or no no 0.917 0.700 0.542 1e-101
P05994348 Papaya proteinase 4 OS=Ca N/A no 0.974 0.979 0.549 1e-101
O65039360 Vignain OS=Ricinus commun N/A no 0.865 0.841 0.576 1e-98
P25803362 Vignain OS=Phaseolus vulg N/A no 0.96 0.928 0.533 1e-98
P12412362 Vignain OS=Vigna mungo PE N/A no 0.902 0.872 0.546 2e-98
>sp|O65493|XCP1_ARATH Xylem cysteine proteinase 1 OS=Arabidopsis thaliana GN=XCP1 PE=1 SV=1 Back     alignment and function desciption
 Score =  585 bits (1509), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 264/341 (77%), Positives = 306/341 (89%), Gaps = 1/341 (0%)

Query: 10  LLLSLSLSLFACSSLAHDFSIVGYSPEHLTSMDKLIELFESWMSKHGKTYKCIEEKLHRF 69
           LL+++S S   C + A DFSIVGY+PEHLT+ DKL+ELFESWMS+H K YK +EEK+HRF
Sbjct: 13  LLVAISASALLCCAFARDFSIVGYTPEHLTNTDKLLELFESWMSEHSKAYKSVEEKVHRF 72

Query: 70  EIFKENLKHIDQRNKEVTSYWLGLNEFADMSHEEFKNKYLGL-KPQFPTRRQPSAEFSYR 128
           E+F+ENL HIDQRN E+ SYWLGLNEFAD++HEEFK +YLGL KPQF  +RQPSA F YR
Sbjct: 73  EVFRENLMHIDQRNNEINSYWLGLNEFADLTHEEFKGRYLGLAKPQFSRKRQPSANFRYR 132

Query: 129 DVKALPKSVDWRKKGAVTPVKNQGSCGSCWAFSTVAAVEGINQIVSGNLTSLSEQELIDC 188
           D+  LPKSVDWRKKGAV PVK+QG CGSCWAFSTVAAVEGINQI +GNL+SLSEQELIDC
Sbjct: 133 DITDLPKSVDWRKKGAVAPVKDQGQCGSCWAFSTVAAVEGINQITTGNLSSLSEQELIDC 192

Query: 189 DTSFNNGCNGGLMDYAFKYIVASGGLHKEEDYPYLMEEGTCEDKKEEMEVVTISGYQDVP 248
           DT+FN+GCNGGLMDYAF+YI+++GGLHKE+DYPYLMEEG C+++KE++E VTISGY+DVP
Sbjct: 193 DTTFNSGCNGGLMDYAFQYIISTGGLHKEDDYPYLMEEGICQEQKEDVERVTISGYEDVP 252

Query: 249 ENDEQSLLKALAHQPVSVAIEASGTDFQFYSGGVFTGPCGAELDHGVAAVGYGKSKGSDY 308
           END++SL+KALAHQPVSVAIEASG DFQFY GGVF G CG +LDHGVAAVGYG SKGSDY
Sbjct: 253 ENDDESLVKALAHQPVSVAIEASGRDFQFYKGGVFNGKCGTDLDHGVAAVGYGSSKGSDY 312

Query: 309 IIVKNSWGPKWGERGYIRMKRNTGKPEGLCGINKMASIPLK 349
           +IVKNSWGP+WGE+G+IRMKRNTGKPEGLCGINKMAS P K
Sbjct: 313 VIVKNSWGPRWGEKGFIRMKRNTGKPEGLCGINKMASYPTK 353
Probable thiol protease.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 4EC: .EC: 2EC: 2EC: .EC: -
>sp|Q9LM66|XCP2_ARATH Xylem cysteine proteinase 2 OS=Arabidopsis thaliana GN=XCP2 PE=1 SV=2 Back     alignment and function description
>sp|P14080|PAPA2_CARPA Chymopapain OS=Carica papaya PE=1 SV=2 Back     alignment and function description
>sp|P43297|RD21A_ARATH Cysteine proteinase RD21a OS=Arabidopsis thaliana GN=RD21A PE=1 SV=1 Back     alignment and function description
>sp|Q9FGR9|CEP1_ARATH KDEL-tailed cysteine endopeptidase CEP1 OS=Arabidopsis thaliana GN=CEP1 PE=2 SV=1 Back     alignment and function description
>sp|P25776|ORYA_ORYSJ Oryzain alpha chain OS=Oryza sativa subsp. japonica GN=Os04g0650000 PE=1 SV=2 Back     alignment and function description
>sp|P05994|PAPA4_CARPA Papaya proteinase 4 OS=Carica papaya PE=1 SV=3 Back     alignment and function description
>sp|O65039|CYSEP_RICCO Vignain OS=Ricinus communis GN=CYSEP PE=1 SV=1 Back     alignment and function description
>sp|P25803|CYSEP_PHAVU Vignain OS=Phaseolus vulgaris PE=2 SV=2 Back     alignment and function description
>sp|P12412|CYSEP_VIGMU Vignain OS=Vigna mungo PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query350
224131910349 predicted protein [Populus trichocarpa] 0.977 0.979 0.836 1e-173
297802418355 hypothetical protein ARALYDRAFT_491113 [ 0.971 0.957 0.777 1e-165
18418684355 Xylem cysteine proteinase 1 [Arabidopsis 0.971 0.957 0.774 1e-165
225428328 707 PREDICTED: cysteine proteinase-like [Vit 0.925 0.458 0.814 1e-163
449500145349 PREDICTED: xylem cysteine proteinase 1-l 0.994 0.997 0.777 1e-161
356508490349 PREDICTED: xylem cysteine proteinase 2-l 0.988 0.991 0.786 1e-161
449454309349 PREDICTED: xylem cysteine proteinase 1-l 0.994 0.997 0.774 1e-160
356508487349 PREDICTED: xylem cysteine proteinase 2-l 0.988 0.991 0.780 1e-160
356517184350 PREDICTED: xylem cysteine proteinase 2-l 0.997 0.997 0.768 1e-159
356517188350 PREDICTED: xylem cysteine proteinase 2-l 0.997 0.997 0.768 1e-159
>gi|224131910|ref|XP_002328138.1| predicted protein [Populus trichocarpa] gi|222837653|gb|EEE76018.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  613 bits (1582), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 287/343 (83%), Positives = 315/343 (91%), Gaps = 1/343 (0%)

Query: 8   KLLLLSLSLSLFACSSLAHDFSIVGYSPEHLTSMDKLIELFESWMSKHGKTYKCIEEKLH 67
           K   L+   SLF CS LAHDFSIVGYSPEHLTS+DKL+ELFESW+S HGK Y  +EEKLH
Sbjct: 7   KTSFLTFFASLFVCSVLAHDFSIVGYSPEHLTSVDKLVELFESWISGHGKAYNSLEEKLH 66

Query: 68  RFEIFKENLKHIDQRNKEVTSYWLGLNEFADMSHEEFKNKYLGLKPQFPTRRQPSAEFSY 127
           RFE+FKENLKHIDQRNKEVTSYWLGLNEFAD+SHEEFK+K+LGL P+FP R++ S +FSY
Sbjct: 67  RFEVFKENLKHIDQRNKEVTSYWLGLNEFADLSHEEFKSKFLGLYPEFP-RKKSSEDFSY 125

Query: 128 RDVKALPKSVDWRKKGAVTPVKNQGSCGSCWAFSTVAAVEGINQIVSGNLTSLSEQELID 187
           RDV  LPKS+DWRKKGAVTPVKNQGSCGSCWAFSTVAAVEGINQIV+GNLTSLSEQ+LID
Sbjct: 126 RDVVDLPKSIDWRKKGAVTPVKNQGSCGSCWAFSTVAAVEGINQIVAGNLTSLSEQQLID 185

Query: 188 CDTSFNNGCNGGLMDYAFKYIVASGGLHKEEDYPYLMEEGTCEDKKEEMEVVTISGYQDV 247
           CDTSFNNGCNGGLMDYAF++IV +GGLHKEEDYPYLMEEGTC++K+EEMEVVTISGY DV
Sbjct: 186 CDTSFNNGCNGGLMDYAFEFIVNNGGLHKEEDYPYLMEEGTCDEKREEMEVVTISGYHDV 245

Query: 248 PENDEQSLLKALAHQPVSVAIEASGTDFQFYSGGVFTGPCGAELDHGVAAVGYGKSKGSD 307
           P NDEQSLLKALAHQP+SVAI+ASG DFQFYSGGVF+GPCG +LDHGVAAVGYG S G D
Sbjct: 246 PRNDEQSLLKALAHQPLSVAIDASGRDFQFYSGGVFSGPCGTDLDHGVAAVGYGSSSGID 305

Query: 308 YIIVKNSWGPKWGERGYIRMKRNTGKPEGLCGINKMASIPLKK 350
           YIIVKNSWGPKWGERGY+RMKRNTGKPEGLCGINKMAS P K+
Sbjct: 306 YIIVKNSWGPKWGERGYLRMKRNTGKPEGLCGINKMASYPTKQ 348

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|297802418|ref|XP_002869093.1| hypothetical protein ARALYDRAFT_491113 [Arabidopsis lyrata subsp. lyrata] gi|297314929|gb|EFH45352.1| hypothetical protein ARALYDRAFT_491113 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|18418684|ref|NP_567983.1| Xylem cysteine proteinase 1 [Arabidopsis thaliana] gi|71153408|sp|O65493.1|XCP1_ARATH RecName: Full=Xylem cysteine proteinase 1; Short=AtXCP1; Flags: Precursor gi|6708181|gb|AAF25831.1|AF191027_1 papain-type cysteine endopeptidase XCP1 [Arabidopsis thaliana] gi|3080415|emb|CAA18734.1| cysteine proteinase-like protein [Arabidopsis thaliana] gi|7270487|emb|CAB80252.1| cysteine proteinase-like protein [Arabidopsis thaliana] gi|26449881|dbj|BAC42063.1| putative cysteine proteinase [Arabidopsis thaliana] gi|28827736|gb|AAO50712.1| unknown protein [Arabidopsis thaliana] gi|332661101|gb|AEE86501.1| Xylem cysteine proteinase 1 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|225428328|ref|XP_002279940.1| PREDICTED: cysteine proteinase-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|449500145|ref|XP_004161017.1| PREDICTED: xylem cysteine proteinase 1-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356508490|ref|XP_003522989.1| PREDICTED: xylem cysteine proteinase 2-like [Glycine max] Back     alignment and taxonomy information
>gi|449454309|ref|XP_004144898.1| PREDICTED: xylem cysteine proteinase 1-like [Cucumis sativus] gi|449471311|ref|XP_004153272.1| PREDICTED: xylem cysteine proteinase 1-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356508487|ref|XP_003522988.1| PREDICTED: xylem cysteine proteinase 2-like [Glycine max] Back     alignment and taxonomy information
>gi|356517184|ref|XP_003527269.1| PREDICTED: xylem cysteine proteinase 2-like [Glycine max] Back     alignment and taxonomy information
>gi|356517188|ref|XP_003527271.1| PREDICTED: xylem cysteine proteinase 2-like [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query350
TAIR|locus:2122113355 XCP1 "xylem cysteine peptidase 0.922 0.909 0.796 1.1e-149
TAIR|locus:2030427356 XCP2 "xylem cysteine peptidase 0.925 0.910 0.776 1.9e-140
TAIR|locus:2167821 463 RD21B "esponsive to dehydratio 0.914 0.691 0.572 6.4e-99
TAIR|locus:2825832 462 RD21A "responsive to dehydrati 0.922 0.699 0.528 1.1e-96
TAIR|locus:2157712361 CEP1 "cysteine endopeptidase 1 0.882 0.855 0.587 6.8e-95
TAIR|locus:2090614 452 AT3G19390 [Arabidopsis thalian 0.862 0.668 0.552 3.5e-91
TAIR|locus:2024362 437 XBCP3 "xylem bark cysteine pep 0.888 0.711 0.535 3.2e-88
TAIR|locus:2152445346 SAG12 "senescence-associated g 0.845 0.855 0.534 2.6e-86
TAIR|locus:2090629362 AT3G19400 [Arabidopsis thalian 0.865 0.837 0.517 4.9e-85
TAIR|locus:2117979356 AT4G23520 [Arabidopsis thalian 0.885 0.870 0.503 9.1e-84
TAIR|locus:2122113 XCP1 "xylem cysteine peptidase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1461 (519.4 bits), Expect = 1.1e-149, P = 1.1e-149
 Identities = 258/324 (79%), Positives = 296/324 (91%)

Query:    27 DFSIVGYSPEHLTSMDKLIELFESWMSKHGKTYKCIEEKLHRFEIFKENLKHIDQRNKEV 86
             DFSIVGY+PEHLT+ DKL+ELFESWMS+H K YK +EEK+HRFE+F+ENL HIDQRN E+
Sbjct:    30 DFSIVGYTPEHLTNTDKLLELFESWMSEHSKAYKSVEEKVHRFEVFRENLMHIDQRNNEI 89

Query:    87 TSYWLGLNEFADMSHEEFKNKYLGL-KPQFPTRRQPSAEFSYRDVKALPKSVDWRKKGAV 145
              SYWLGLNEFAD++HEEFK +YLGL KPQF  +RQPSA F YRD+  LPKSVDWRKKGAV
Sbjct:    90 NSYWLGLNEFADLTHEEFKGRYLGLAKPQFSRKRQPSANFRYRDITDLPKSVDWRKKGAV 149

Query:   146 TPVKNQGSCGSCWAFSTVAAVEGINQIVSGNLTSLSEQELIDCDTSFNNGCNGGLMDYAF 205
              PVK+QG CGSCWAFSTVAAVEGINQI +GNL+SLSEQELIDCDT+FN+GCNGGLMDYAF
Sbjct:   150 APVKDQGQCGSCWAFSTVAAVEGINQITTGNLSSLSEQELIDCDTTFNSGCNGGLMDYAF 209

Query:   206 KYIVASGGLHKEEDYPYLMEEGTCEDKKEEMEVVTISGYQDVPENDEQSLLKALAHQPVS 265
             +YI+++GGLHKE+DYPYLMEEG C+++KE++E VTISGY+DVPEND++SL+KALAHQPVS
Sbjct:   210 QYIISTGGLHKEDDYPYLMEEGICQEQKEDVERVTISGYEDVPENDDESLVKALAHQPVS 269

Query:   266 VAIEASGTDFQFYSGGVFTGPCGAELDHGVAAVGYGKSKGSDYIIVKNSWGPKWGERGYI 325
             VAIEASG DFQFY GGVF G CG +LDHGVAAVGYG SKGSDY+IVKNSWGP+WGE+G+I
Sbjct:   270 VAIEASGRDFQFYKGGVFNGKCGTDLDHGVAAVGYGSSKGSDYVIVKNSWGPRWGEKGFI 329

Query:   326 RMKRNTGKPEGLCGINKMASIPLK 349
             RMKRNTGKPEGLCGINKMAS P K
Sbjct:   330 RMKRNTGKPEGLCGINKMASYPTK 353
GO:0005576 "extracellular region" evidence=ISM
GO:0006508 "proteolysis" evidence=IEA;ISS
GO:0008234 "cysteine-type peptidase activity" evidence=IEA;ISS
GO:0000325 "plant-type vacuole" evidence=IDA
GO:0005634 "nucleus" evidence=IDA
GO:0010623 "developmental programmed cell death" evidence=IMP
GO:0010413 "glucuronoxylan metabolic process" evidence=RCA
GO:0045492 "xylan biosynthetic process" evidence=RCA
TAIR|locus:2030427 XCP2 "xylem cysteine peptidase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2167821 RD21B "esponsive to dehydration 21B" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2825832 RD21A "responsive to dehydration 21A" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2157712 CEP1 "cysteine endopeptidase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2090614 AT3G19390 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2024362 XBCP3 "xylem bark cysteine peptidase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2152445 SAG12 "senescence-associated gene 12" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2090629 AT3G19400 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2117979 AT4G23520 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
O65039CYSEP_RICCO3, ., 4, ., 2, 2, ., -0.57600.86570.8416N/Ano
P05994PAPA4_CARPA3, ., 4, ., 2, 2, ., 2, 50.54910.97420.9798N/Ano
P00784PAPA1_CARPA3, ., 4, ., 2, 2, ., 20.51850.95140.9652N/Ano
Q95029CATL_DROME3, ., 4, ., 2, 2, ., 1, 50.44580.86280.8140yesno
P25249CYSP1_HORVU3, ., 4, ., 2, 2, ., -0.53750.88850.8382N/Ano
Q9LM66XCP2_ARATH3, ., 4, ., 2, 2, ., -0.77600.92570.9101nono
P43235CATK_HUMAN3, ., 4, ., 2, 2, ., 3, 80.43640.84280.8966yesno
Q3T0I2CATH_BOVIN3, ., 4, ., 2, 2, ., 1, 60.41880.83140.8686yesno
Q28944CATL1_PIG3, ., 4, ., 2, 2, ., 1, 50.43680.82570.8652yesno
P43156CYSP_HEMSP3, ., 4, ., 2, 2, ., -0.53060.95140.925N/Ano
P25803CYSEP_PHAVU3, ., 4, ., 2, 2, ., -0.53310.960.9281N/Ano
P10056PAPA3_CARPA3, ., 4, ., 2, 2, ., 3, 00.53620.97710.9827N/Ano
P14080PAPA2_CARPA3, ., 4, ., 2, 2, ., 60.53310.97710.9715N/Ano
O65493XCP1_ARATH3, ., 4, ., 2, 2, ., -0.77410.97140.9577yesno
P25250CYSP2_HORVU3, ., 4, ., 2, 2, ., -0.53750.88850.8337N/Ano
P25251CYSP4_BRANA3, ., 4, ., 2, 2, ., -0.51100.86850.9268N/Ano
Q23894CYSP3_DICDI3, ., 4, ., 2, 2, ., -0.43350.940.9762yesno
P12412CYSEP_VIGMU3, ., 4, ., 2, 2, ., -0.54650.90280.8729N/Ano

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.4.220.963

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query350
pfam00112213 pfam00112, Peptidase_C1, Papain family cysteine pr 1e-125
cd02248210 cd02248, Peptidase_C1A, Peptidase C1A subfamily (M 1e-113
smart00645175 smart00645, Pept_C1, Papain family cysteine protea 8e-90
PTZ00021489 PTZ00021, PTZ00021, falcipain-2; Provisional 1e-79
PTZ00200448 PTZ00200, PTZ00200, cysteine proteinase; Provision 7e-72
PTZ00203348 PTZ00203, PTZ00203, cathepsin L protease; Provisio 2e-66
cd02619223 cd02619, Peptidase_C1, C1 Peptidase family (MEROPS 4e-40
cd02621243 cd02621, Peptidase_C1A_CathepsinC, Cathepsin C; al 5e-32
cd02620236 cd02620, Peptidase_C1A_CathepsinB, Cathepsin B gro 4e-31
cd02698239 cd02698, Peptidase_C1A_CathepsinX, Cathepsin X; th 5e-26
smart0084857 smart00848, Inhibitor_I29, Cathepsin propeptide in 5e-23
pfam0824658 pfam08246, Inhibitor_I29, Cathepsin propeptide inh 1e-21
COG4870372 COG4870, COG4870, Cysteine protease [Posttranslati 2e-15
PTZ00049693 PTZ00049, PTZ00049, cathepsin C-like protein; Prov 1e-09
PTZ00364548 PTZ00364, PTZ00364, dipeptidyl-peptidase I precurs 2e-08
PTZ00462 1004 PTZ00462, PTZ00462, Serine-repeat antigen protein; 3e-05
>gnl|CDD|215726 pfam00112, Peptidase_C1, Papain family cysteine protease Back     alignment and domain information 
 Score =  357 bits (919), Expect = e-125
 Identities = 124/218 (56%), Positives = 145/218 (66%), Gaps = 7/218 (3%)

Query: 133 LPKSVDWRKKGAVTPVKNQGSCGSCWAFSTVAAVEGINQIVSGNLTSLSEQELIDCDTSF 192
           LP+S DWR+KGAVTPVK+QG CGSCWAFS V A+EG   I +G L SLSEQ+L+DCDT  
Sbjct: 1   LPESFDWREKGAVTPVKDQGQCGSCWAFSAVGALEGRYCIKTGKLVSLSEQQLVDCDTG- 59

Query: 193 NNGCNGGLMDYAFKYIVASGGLHKEEDYPYLMEEGTCEDKKEEMEVVTISGYQDVPENDE 252
           NNGCNGGL D AF+YI  +GG+  E DYPY   +GTC+ KK   +   I GY DVP NDE
Sbjct: 60  NNGCNGGLPDNAFEYIKKNGGIVTESDYPYTAHDGTCKFKKSNSKYAKIKGYGDVPYNDE 119

Query: 253 QSLLKALA-HQPVSVAIEASGTDFQFYSGGVFTGP-CGAELDHGVAAVGYGKSKGSDYII 310
           ++L  ALA + PVSVAI+A   DFQ Y  GV+    C  ELDH V  VGYG   G  Y I
Sbjct: 120 EALQAALAKNGPVSVAIDAYEDDFQLYKSGVYKHTECSGELDHAVLIVGYGTENGVPYWI 179

Query: 311 VKNSWGPKWGERGYIRMKRNTGKPEGLCGINKMASIPL 348
           VKNSWG  WGE GY R+ R   +    CGI   AS P+
Sbjct: 180 VKNSWGTDWGENGYFRIARGVNE----CGIASEASYPI 213

Length = 213
>gnl|CDD|239068 cd02248, Peptidase_C1A, Peptidase C1A subfamily (MEROPS database nomenclature); composed of cysteine peptidases (CPs) similar to papain, including the mammalian CPs (cathepsins B, C, F, H, L, K, O, S, V, X and W) Back     alignment and domain information
>gnl|CDD|214761 smart00645, Pept_C1, Papain family cysteine protease Back     alignment and domain information
>gnl|CDD|240232 PTZ00021, PTZ00021, falcipain-2; Provisional Back     alignment and domain information
>gnl|CDD|240310 PTZ00200, PTZ00200, cysteine proteinase; Provisional Back     alignment and domain information
>gnl|CDD|185513 PTZ00203, PTZ00203, cathepsin L protease; Provisional Back     alignment and domain information
>gnl|CDD|239110 cd02619, Peptidase_C1, C1 Peptidase family (MEROPS database nomenclature), also referred to as the papain family; composed of two subfamilies of cysteine peptidases (CPs), C1A (papain) and C1B (bleomycin hydrolase) Back     alignment and domain information
>gnl|CDD|239112 cd02621, Peptidase_C1A_CathepsinC, Cathepsin C; also known as Dipeptidyl Peptidase I (DPPI), an atypical papain-like cysteine peptidase with chloride dependency and dipeptidyl aminopeptidase activity, resulting from its tetrameric structure which limits substrate access Back     alignment and domain information
>gnl|CDD|239111 cd02620, Peptidase_C1A_CathepsinB, Cathepsin B group; composed of cathepsin B and similar proteins, including tubulointerstitial nephritis antigen (TIN-Ag) Back     alignment and domain information
>gnl|CDD|239149 cd02698, Peptidase_C1A_CathepsinX, Cathepsin X; the only papain-like lysosomal cysteine peptidase exhibiting carboxymonopeptidase activity Back     alignment and domain information
>gnl|CDD|214853 smart00848, Inhibitor_I29, Cathepsin propeptide inhibitor domain (I29) Back     alignment and domain information
>gnl|CDD|219764 pfam08246, Inhibitor_I29, Cathepsin propeptide inhibitor domain (I29) Back     alignment and domain information
>gnl|CDD|227207 COG4870, COG4870, Cysteine protease [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>gnl|CDD|240244 PTZ00049, PTZ00049, cathepsin C-like protein; Provisional Back     alignment and domain information
>gnl|CDD|240381 PTZ00364, PTZ00364, dipeptidyl-peptidase I precursor; Provisional Back     alignment and domain information
>gnl|CDD|185641 PTZ00462, PTZ00462, Serine-repeat antigen protein; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 350
KOG1542372 consensus Cysteine proteinase Cathepsin F [Posttra 100.0
PTZ00203348 cathepsin L protease; Provisional 100.0
PTZ00021489 falcipain-2; Provisional 100.0
PTZ00200448 cysteine proteinase; Provisional 100.0
KOG1543325 consensus Cysteine proteinase Cathepsin L [Posttra 100.0
cd02621243 Peptidase_C1A_CathepsinC Cathepsin C; also known a 100.0
cd02698239 Peptidase_C1A_CathepsinX Cathepsin X; the only pap 100.0
cd02248210 Peptidase_C1A Peptidase C1A subfamily (MEROPS data 100.0
cd02620236 Peptidase_C1A_CathepsinB Cathepsin B group; compos 100.0
PF00112219 Peptidase_C1: Papain family cysteine protease This 100.0
PTZ00049693 cathepsin C-like protein; Provisional 100.0
PTZ00364548 dipeptidyl-peptidase I precursor; Provisional 100.0
smart00645174 Pept_C1 Papain family cysteine protease. 100.0
cd02619223 Peptidase_C1 C1 Peptidase family (MEROPS database 100.0
PTZ00462 1004 Serine-repeat antigen protein; Provisional 100.0
KOG1544470 consensus Predicted cysteine proteinase TIN-ag [Ge 100.0
COG4870372 Cysteine protease [Posttranslational modification, 99.97
cd00585437 Peptidase_C1B Peptidase C1B subfamily (MEROPS data 99.91
PF03051438 Peptidase_C1_2: Peptidase C1-like family This fami 99.72
PF0824658 Inhibitor_I29: Cathepsin propeptide inhibitor doma 99.67
smart0084857 Inhibitor_I29 Cathepsin propeptide inhibitor domai 99.52
COG3579 444 PepC Aminopeptidase C [Amino acid transport and me 98.87
KOG4128 457 consensus Bleomycin hydrolases and aminopeptidases 97.48
PF13529144 Peptidase_C39_2: Peptidase_C39 like family; PDB: 3 97.32
PF05543175 Peptidase_C47: Staphopain peptidase C47; InterPro: 96.9
PF0812741 Propeptide_C1: Peptidase family C1 propeptide; Int 96.23
PF14399 317 Transpep_BrtH: NlpC/p60-like transpeptidase 89.78
COG4990195 Uncharacterized protein conserved in bacteria [Fun 86.62
>KOG1542 consensus Cysteine proteinase Cathepsin F [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information 
Probab=100.00  E-value=3.5e-83  Score=581.85  Aligned_cols=297  Identities=47%  Similarity=0.822  Sum_probs=263.6

Q ss_pred             HHHHHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHhccCC-CcEEEEcccCCCCChHhHhhhhcCCCCC-CCCCCC
Q 018781           43 KLIELFESWMSKHGKTYKCIEEKLHRFEIFKENLKHIDQRNKEV-TSYWLGLNEFADMSHEEFKNKYLGLKPQ-FPTRRQ  120 (350)
Q Consensus        43 ~~~~~f~~~~~~~~k~Y~~~~E~~~R~~if~~n~~~I~~~N~~~-~s~~~g~N~fsDlt~~E~~~~~~~~~~~-~~~~~~  120 (350)
                      ...+.|..|+.+|+|+|.+.+|..+|++||++|+..++++++.. .|.+.|+|+|||||+|||++++++.+.. .+. +.
T Consensus        66 ~~~~~F~~F~~kf~r~Y~s~eE~~~Rl~iF~~N~~~a~~~q~~d~gsA~yGvtqFSDlT~eEFkk~~l~~~~~~~~~-~~  144 (372)
T KOG1542|consen   66 GLEDSFKLFTIKFGRSYASREEHAHRLSIFKHNLLRAERLQENDPGSAEYGVTQFSDLTEEEFKKIYLGVKRRGSKL-PG  144 (372)
T ss_pred             chHHHHHHHHHhcCcccCcHHHHHHHHHHHHHHHHHHHHhhhcCccccccCccchhhcCHHHHHHHhhccccccccC-cc
Confidence            34789999999999999999999999999999999999998875 5899999999999999999999876553 111 11


Q ss_pred             CCCcccccccCCCCCeeeccCCCCCCccccCCCCcchHHHHHHHHHHHHHHHHcCCCcccChHHhhhhcCCCCCCCCCCc
Q 018781          121 PSAEFSYRDVKALPKSVDWRKKGAVTPVKNQGSCGSCWAFSTVAAVEGINQIVSGNLTSLSEQELIDCDTSFNNGCNGGL  200 (350)
Q Consensus       121 ~~~~~~~~~~~~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~lE~~~~~~~~~~~~lS~q~l~~c~~~~~~gC~GG~  200 (350)
                      .....+......||++||||++|.||||||||+||||||||+++++|+++.+++|++++||||+|+||+. .++||+||.
T Consensus       145 ~~~~~~~~~~~~lP~~fDWR~kgaVTpVKnQG~CGSCWAFS~tG~vEga~~i~~g~LvsLSEQeLvDCD~-~d~gC~GGl  223 (372)
T KOG1542|consen  145 DAAEAPIEPGESLPESFDWRDKGAVTPVKNQGMCGSCWAFSTTGAVEGAWAIATGKLVSLSEQELVDCDS-CDNGCNGGL  223 (372)
T ss_pred             ccccCcCCCCCCCCcccchhccCCccccccCCcCcchhhhhhhhhhhhHHHhhcCcccccchhhhhcccC-cCCcCCCCC
Confidence            1111122344689999999999999999999999999999999999999999999999999999999997 489999999


Q ss_pred             hHHHHHHHHHhCCCCCCCCCccccCCC-ccCCCccCceeEEEeeeEecCCCcHHHHHHHH-hcCCcEEEEeecCcccccc
Q 018781          201 MDYAFKYIVASGGLHKEEDYPYLMEEG-TCEDKKEEMEVVTISGYQDVPENDEQSLLKAL-AHQPVSVAIEASGTDFQFY  278 (350)
Q Consensus       201 ~~~a~~~~~~~~Gi~~e~~yPY~~~~~-~c~~~~~~~~~~~i~~~~~v~~~~~~~i~~al-~~GPV~v~i~~~~~~f~~y  278 (350)
                      +..|++|+++.+|+..|++|||++..+ .|...+ ....+.|.+|..++. |+++|.+.| ++|||+|+|++  ..+|.|
T Consensus       224 ~~nA~~~~~~~gGL~~E~dYPY~g~~~~~C~~~~-~~~~v~I~~f~~l~~-nE~~ia~wLv~~GPi~vgiNa--~~mQ~Y  299 (372)
T KOG1542|consen  224 MDNAFKYIKKAGGLEKEKDYPYTGKKGNQCHFDK-SKIVVSIKDFSMLSN-NEDQIAAWLVTFGPLSVGINA--KPMQFY  299 (372)
T ss_pred             hhHHHHHHHHhCCccccccCCccccCCCccccch-hhceEEEeccEecCC-CHHHHHHHHHhcCCeEEEEch--HHHHHh
Confidence            999999988888999999999999887 898654 567889999999976 899999998 78999999997  489999


Q ss_pred             cCCeeeC---CCCCC-CCeEEEEEEEeecC-CeeEEEEEcCCCCCCCCCceEEEEecCCCCCCcccccccccceec
Q 018781          279 SGGVFTG---PCGAE-LDHGVAAVGYGKSK-GSDYIIVKNSWGPKWGERGYIRMKRNTGKPEGLCGINKMASIPLK  349 (350)
Q Consensus       279 ~~Giy~~---~~~~~-~~Hav~iVGyg~~~-g~~ywivkNSWG~~WG~~GY~~i~~~~~~~~~~CgI~~~~~~p~~  349 (350)
                      .+||..+   .|... ++|||+|||||... .++|||||||||++|||+||+|+.||.    |.|||+++++-+.+
T Consensus       300 rgGV~~P~~~~Cs~~~~~HaVLlvGyG~~g~~~PYWIVKNSWG~~WGE~GY~~l~RG~----N~CGi~~mvss~~v  371 (372)
T KOG1542|consen  300 RGGVSCPSKYICSPKLLNHAVLLVGYGSSGYEKPYWIVKNSWGTSWGEKGYYKLCRGS----NACGIADMVSSAAV  371 (372)
T ss_pred             cccccCCCcccCCccccCceEEEEeecCCCCCCceEEEECCccccccccceEEEeccc----cccccccchhhhhc
Confidence            9999987   68764 89999999999987 899999999999999999999999995    58999999886654

>PTZ00203 cathepsin L protease; Provisional Back     alignment and domain information
>PTZ00021 falcipain-2; Provisional Back     alignment and domain information
>PTZ00200 cysteine proteinase; Provisional Back     alignment and domain information
>KOG1543 consensus Cysteine proteinase Cathepsin L [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd02621 Peptidase_C1A_CathepsinC Cathepsin C; also known as Dipeptidyl Peptidase I (DPPI), an atypical papain-like cysteine peptidase with chloride dependency and dipeptidyl aminopeptidase activity, resulting from its tetrameric structure which limits substrate access Back     alignment and domain information
>cd02698 Peptidase_C1A_CathepsinX Cathepsin X; the only papain-like lysosomal cysteine peptidase exhibiting carboxymonopeptidase activity Back     alignment and domain information
>cd02248 Peptidase_C1A Peptidase C1A subfamily (MEROPS database nomenclature); composed of cysteine peptidases (CPs) similar to papain, including the mammalian CPs (cathepsins B, C, F, H, L, K, O, S, V, X and W) Back     alignment and domain information
>cd02620 Peptidase_C1A_CathepsinB Cathepsin B group; composed of cathepsin B and similar proteins, including tubulointerstitial nephritis antigen (TIN-Ag) Back     alignment and domain information
>PF00112 Peptidase_C1: Papain family cysteine protease This is family C1 in the peptidase classification Back     alignment and domain information
>PTZ00049 cathepsin C-like protein; Provisional Back     alignment and domain information
>PTZ00364 dipeptidyl-peptidase I precursor; Provisional Back     alignment and domain information
>smart00645 Pept_C1 Papain family cysteine protease Back     alignment and domain information
>cd02619 Peptidase_C1 C1 Peptidase family (MEROPS database nomenclature), also referred to as the papain family; composed of two subfamilies of cysteine peptidases (CPs), C1A (papain) and C1B (bleomycin hydrolase) Back     alignment and domain information
>PTZ00462 Serine-repeat antigen protein; Provisional Back     alignment and domain information
>KOG1544 consensus Predicted cysteine proteinase TIN-ag [General function prediction only] Back     alignment and domain information
>COG4870 Cysteine protease [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd00585 Peptidase_C1B Peptidase C1B subfamily (MEROPS database nomenclature); composed of eukaryotic bleomycin hydrolases (BH) and bacterial aminopeptidases C (pepC) Back     alignment and domain information
>PF03051 Peptidase_C1_2: Peptidase C1-like family This family is a subfamily of the Prosite entry; InterPro: IPR004134 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>PF08246 Inhibitor_I29: Cathepsin propeptide inhibitor domain (I29); InterPro: IPR013201 Peptide proteinase inhibitors can be found as single domain proteins or as single or multiple domains within proteins; these are referred to as either simple or compound inhibitors, respectively Back     alignment and domain information
>smart00848 Inhibitor_I29 Cathepsin propeptide inhibitor domain (I29) Back     alignment and domain information
>COG3579 PepC Aminopeptidase C [Amino acid transport and metabolism] Back     alignment and domain information
>KOG4128 consensus Bleomycin hydrolases and aminopeptidases of cysteine protease family [Amino acid transport and metabolism] Back     alignment and domain information
>PF13529 Peptidase_C39_2: Peptidase_C39 like family; PDB: 3ERV_A Back     alignment and domain information
>PF05543 Peptidase_C47: Staphopain peptidase C47; InterPro: IPR008750 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>PF08127 Propeptide_C1: Peptidase family C1 propeptide; InterPro: IPR012599 This domain is found at the N-terminal of cathepsin B and cathepsin B-like peptidases that belong to MEROPS peptidase subfamily C1A Back     alignment and domain information
>PF14399 Transpep_BrtH: NlpC/p60-like transpeptidase Back     alignment and domain information
>COG4990 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query350
1pci_A322 Procaricain Length = 322 8e-96
3tnx_A363 Structure Of The Precursor Of A Thermostable Varian 3e-92
1s4v_A229 The 2.0 A Crystal Structure Of The Kdel-Tailed Cyst 4e-83
2fo5_A262 Crystal Structure Of Recombinant Barley Cysteine En 6e-76
1cqd_A221 The 2.1 Angstrom Structure Of A Cysteine Protease W 2e-72
1iwd_A215 Proposed Amino Acid Sequence And The 1.63 Angstrom 8e-70
3p5w_A220 Actinidin From Actinidia Arguta Planch (Sarusashi) 2e-69
1yal_A218 Carica Papaya Chymopapain At 1.7 Angstroms Resoluti 3e-69
3p5u_A220 Actinidin From Actinidia Arguta Planch (Sarusashi) 2e-68
2bdz_A214 Mexicain From Jacaratia Mexicana Length = 214 3e-68
2pns_A208 1.9 Angstrom Resolution Crystal Structure Of A Plan 2e-65
1aec_A218 Crystal Structure Of Actinidin-E-64 Complex+ Length 6e-65
3bcn_A209 Crystal Structure Of A Papain-Like Cysteine Proteas 2e-64
1o0e_A208 1.9 Angstrom Crystal Structure Of A Plant Cysteine 6e-64
2act_A220 Crystallographic Refinement Of The Structure Of Act 1e-63
1ppo_A216 Determination Of The Structure Of Papaya Protease O 7e-63
1meg_A216 Crystal Structure Of A Caricain D158e Mutant In Com 2e-62
1gec_E216 Glycyl Endopeptidase-complex With Benzyloxycarbonyl 9e-62
7pck_A314 Crystal Structure Of Wild Type Human Procathepsin K 7e-61
3ioq_A213 Crystal Structure Of The Carica Candamarcensis Cyst 1e-59
1khp_A212 Monoclinic Form Of Papain/zlfg-dam Covalent Complex 2e-59
1pip_A212 Crystal Structure Of Papain-Succinyl-Gln-Val-Val-Al 4e-59
1ppp_A212 Crystal Structure Of Papain-E64-C Complex. Binding 1e-58
1cjl_A312 Crystal Structure Of A Cysteine Protease Proform Le 1e-58
2cio_A212 The High Resolution X-Ray Structure Of Papain Compl 2e-58
3ima_A212 Complex Strcuture Of Tarocystatin And Papain Length 3e-58
1stf_E212 The Refined 2.4 Angstroms X-Ray Crystal Structure O 8e-58
1cs8_A316 Crystal Structure Of Procathepsin L Length = 316 1e-57
3qt4_A329 Structure Of Digestive Procathepsin L 3 Of Tenebrio 5e-57
2o6x_A310 Crystal Structure Of Procathepsin L1 From Fasciola 8e-57
3f75_A224 Activated Toxoplasma Gondii Cathepsin L (Tgcpl) In 8e-56
2c0y_A315 The Crystal Structure Of A Cys25ala Mutant Of Human 3e-55
3u8e_A222 Crystal Structure Of Cysteine Protease From Bulbs O 6e-54
3hwn_A258 Cathepsin L With Az13010160 Length = 258 8e-54
3h7d_A215 The Crystal Structure Of The Cathepsin K Variant M5 3e-51
1mem_A215 Crystal Structure Of Cathepsin K Complexed With A P 3e-51
1u9v_A217 Crystal Structure Of The Cysteine Protease Human Ca 4e-51
1snk_A214 Cathepsin K Complexed With Carbamate Derivatized No 4e-51
2f7d_A215 A Mutant Rabbit Cathepsin K With A Nitrile Inhibito 2e-50
3ovz_A213 Cathepsin K In Complex With A Covalent Inhibitor Wi 2e-50
1fh0_A221 Crystal Structure Of Human Cathepsin V Complexed Wi 5e-50
3of8_A221 Structural Basis For Reversible And Irreversible In 5e-50
3h89_A220 A Combined Crystallographic And Molecular Dynamics 6e-50
3hha_A220 Crystal Structure Of Cathepsin L In Complex With Az 7e-50
1vsn_A215 Crystal Structure Of A Potent Small Molecule Inhibi 3e-49
2nqd_B221 Crystal Structure Of Cysteine Protease Inhibitor, C 5e-49
3iv2_A220 Crystal Structure Of Mature Apo-Cathepsin L C25a Mu 6e-49
3qj3_A331 Structure Of Digestive Procathepsin L2 Proteinase F 6e-49
3h6s_A221 Strucure Of Clitocypin - Cathepsin V Complex Length 7e-49
3bc3_A220 Exploring Inhibitor Binding At The S Subsites Of Ca 9e-49
3kse_A220 Unreduced Cathepsin L In Complex With Stefin A Leng 1e-48
1ms6_A222 Dipeptide Nitrile Inhibitor Bound To Cathepsin S. L 2e-47
2f1g_A220 Cathepsin S In Complex With Non-Covalent 2-(Benzoxa 2e-47
3ovx_A218 Cathepsin S In Complex With A Covalent Inhibitor Wi 3e-47
3n3g_A217 4-(3-Trifluoromethylphenyl)-Pyrimidine-2-Carbonitri 3e-47
2fq9_A225 Cathepsin S With Nitrile Inhibitor Length = 225 4e-47
2g6d_A217 Human Cathepsin S Mutant With Vinyl Sulfone Inhibit 5e-47
1npz_A217 Crystal Structures Of Cathepsin S Inhibitor Complex 6e-47
2fye_A217 Mutant Human Cathepsin S With Irreversible Inhibito 7e-47
3iej_A222 Pyrazole-Based Cathepsin S Inhibitors With Arylalky 2e-46
3kwn_A219 Cathepsin S In Complex With Thioether Acetamide P3 5e-46
3mpe_A220 Crystal Structure Of Human Cathepsin-S C25s Mutant 5e-46
1glo_A217 Crystal Structure Of Cys25ser Mutant Of Human Cathe 7e-46
2b1m_A246 Crystal Structure Of A Papain-Fold Protein Without 9e-46
8pch_A220 Crystal Structure Of Porcine Cathepsin H Determined 2e-44
2vhs_A217 Cathsilicatein, A Chimera Length = 217 2e-44
2p7u_A215 The Crystal Structure Of Rhodesain, The Major Cyste 5e-44
1yvb_A241 The Plasmodium Falciparum Cysteine Protease Falcipa 2e-41
1ewp_A215 Cruzain Bound To Mor-Leu-Hpq Length = 215 4e-41
1icf_A175 Crystal Structure Of Mhc Class Ii Associated P41 Ii 6e-41
1aim_A215 Cruzain Inhibited By Benzoyl-Tyrosine-Alanine-Fluor 7e-41
3bpm_A243 Crystal Structure Of Falcipain-3 With Its Inhibitor 2e-40
3pnr_A240 Structure Of Pbicp-C In Complex With Falcipain-2 Le 2e-40
3iut_A221 The Crystal Structure Of Cruzain In Complex With A 3e-40
3hd3_A215 High Resolution Crystal Structure Of Cruzain Bound 3e-40
1mhw_A175 Design Of Non-covalent Inhibitors Of Human Cathepsi 9e-40
1m6d_A214 Crystal Structure Of Human Cathepsin F Length = 214 4e-32
1xkg_A312 Crystal Structure Of The Major House Dust Mite Alle 4e-29
1jqp_A438 Dipeptidyl Peptidase I (Cathepsin C), A Tetrameric 3e-27
3d6s_A223 Crystal Structure Of Mite Allergen Der F 1 Length = 1e-26
3pdf_A441 Discovery Of Novel Cyanamide-Based Inhibitors Of Ca 1e-24
2as8_A222 Crystal Structure Of Mature And Fully Active Der P 2e-24
3rvw_A222 Crystal Structure Of Der P 1 Complexed With Fab 4c1 2e-24
3f5v_A222 C2 Crystal Form Of Mite Allergen Der P 1 Length = 2 3e-23
1deu_A277 Crystal Structure Of Human Procathepsin X: A Cystei 7e-17
1ef7_A242 Crystal Structure Of Human Cathepsin X Length = 242 8e-17
4hwy_A340 Trypanosoma Brucei Procathepsin B Solved From 40 Fs 4e-15
3hhi_A325 Crystal Structure Of Cathepsin B From T. Brucei In 4e-15
3mor_A317 Crystal Structure Of Cathepsin B From Trypanosoma B 4e-15
3qsd_A254 Structure Of Cathepsin B1 From Schistosoma Mansoni 1e-14
1pbh_A317 Crystal Structure Of Human Recombinant Procathepsin 2e-14
1mir_A322 Rat Procathepsin B Length = 322 2e-13
1cpj_A260 Crystal Structures Of Recombinant Rat Cathepsin B A 4e-13
1gmy_A261 Cathepsin B Complexed With Dipeptidyl Nitrile Inhib 4e-13
1cte_A254 Crystal Structures Of Recombinant Rat Cathepsin B A 4e-13
1k3b_B164 Crystal Structure Of Human Dipeptidyl Peptidase I ( 5e-13
3ai8_B256 Cathepsin B In Complex With The Nitroxoline Length 5e-13
3k9m_A254 Cathepsin B In Complex With Stefin A Length = 254 5e-13
3cbj_A266 Chagasin-cathepsin B Complex Length = 266 6e-12
1ito_A256 Crystal Structure Analysis Of Bovine Spleen Catheps 2e-09
3f75_P106 Activated Toxoplasma Gondii Cathepsin L (Tgcpl) In 3e-09
1qdq_A253 X-Ray Crystal Structure Of Bovine Cathepsin B-Ca074 4e-09
1k3b_C69 Crystal Structure Of Human Dipeptidyl Peptidase I ( 8e-08
2wbf_X265 Crystal Structure Analysis Of Sera5e From Plasmodiu 9e-08
3ch2_X265 Crystal Structure Analysis Of Sera5e From Plasmodiu 9e-08
1sp4_B205 Crystal Structure Of Ns-134 In Complex With Bovine 7e-05
1huc_B205 The Refined 2.15 Angstroms X-Ray Crystal Structure 7e-05
>pdb|1PCI|A Chain A, Procaricain Length = 322 Back     alignment and structure 
Iteration: 1

 Score =  347 bits (889), Expect = 8e-96,   Method: Compositional matrix adjust.
 Identities = 177/323 (54%), Positives = 226/323 (69%), Gaps = 2/323 (0%)
Query: 27  DFSIVGYSPEHLTSMDKLIELFESWMSKHGKTYKCIEEKLHRFEIFKENLKHIDQRNKEV 86
           DFSIVGYS + LTS ++LI+LF SWM  H K Y+ ++EKL+RFEIFK+NL +ID+ NK+ 
Sbjct: 1   DFSIVGYSQDDLTSTERLIQLFNSWMLNHNKFYENVDEKLYRFEIFKDNLNYIDETNKKN 60
Query: 87  TSYWLGLNEFADMSHEEFKNKYLGLKPQFPTRRQPSAEFSYRDVKALPKSVDWRKKGAVT 146
            SYWLGLNEFAD+S++EF  KY+G        +    EF   D+  LP++VDWRKKGAVT
Sbjct: 61  NSYWLGLNEFADLSNDEFNEKYVGSLIDATIEQSYDEEFINEDIVNLPENVDWRKKGAVT 120
Query: 147 PVKNQGSCGSCWAFSTVAAVEGINQIVSGNLTSLSEQELIDCDTSFNNGCNGGLMDYAFK 206
           PV++QGSCGSCWAFS VA VEGIN+I +G L  LSEQEL+DC+   ++GC GG   YA +
Sbjct: 121 PVRHQGSCGSCWAFSAVATVEGINKIRTGKLVELSEQELVDCERR-SHGCKGGYPPYALE 179
Query: 207 YIVASGGLHKEEDYPYLMEEGTCEDKKEEMEVVTISGYQDVPENDEQSLLKALAHQPVSV 266
           Y VA  G+H    YPY  ++GTC  K+    +V  SG   V  N+E +LL A+A QPVSV
Sbjct: 180 Y-VAKNGIHLRSKYPYKAKQGTCRAKQVGGPIVKTSGVGRVQPNNEGNLLNAIAKQPVSV 238
Query: 267 AIEASGTDFQFYSGGVFTGPCGAELDHGVAAVGYGKSKGSDYIIVKNSWGPKWGERGYIR 326
            +E+ G  FQ Y GG+F GPCG ++D  V AVGYGKS G  YI++KNSWG  WGE+GYIR
Sbjct: 239 VVESKGRPFQLYKGGIFEGPCGTKVDGAVTAVGYGKSGGKGYILIKNSWGTAWGEKGYIR 298
Query: 327 MKRNTGKPEGLCGINKMASIPLK 349
           +KR  G   G+CG+ K +  P K
Sbjct: 299 IKRAPGNSPGVCGLYKSSYYPTK 321
>pdb|3TNX|A Chain A, Structure Of The Precursor Of A Thermostable Variant Of Papain At 2.6 Angstroem Resolution Length = 363 Back     alignment and structure
>pdb|1S4V|A Chain A, The 2.0 A Crystal Structure Of The Kdel-Tailed Cysteine Endopeptidase Functioning In Programmed Cell Death Of Ricinus Communis Endosperm Length = 229 Back     alignment and structure
>pdb|2FO5|A Chain A, Crystal Structure Of Recombinant Barley Cysteine Endoprotease B Isoform 2 (Ep-B2) In Complex With Leupeptin Length = 262 Back     alignment and structure
>pdb|1CQD|A Chain A, The 2.1 Angstrom Structure Of A Cysteine Protease With Proline Specificity From Ginger Rhizome, Zingiber Officinale Length = 221 Back     alignment and structure
>pdb|1IWD|A Chain A, Proposed Amino Acid Sequence And The 1.63 Angstrom X-ray Crystal Structure Of A Plant Cysteine Protease Ervatamin B: Insight Into The Structural Basis Of Its Stability And Substrate Specificity Length = 215 Back     alignment and structure
>pdb|3P5W|A Chain A, Actinidin From Actinidia Arguta Planch (Sarusashi) Length = 220 Back     alignment and structure
>pdb|1YAL|A Chain A, Carica Papaya Chymopapain At 1.7 Angstroms Resolution Length = 218 Back     alignment and structure
>pdb|3P5U|A Chain A, Actinidin From Actinidia Arguta Planch (Sarusashi) Length = 220 Back     alignment and structure
>pdb|2BDZ|A Chain A, Mexicain From Jacaratia Mexicana Length = 214 Back     alignment and structure
>pdb|2PNS|A Chain A, 1.9 Angstrom Resolution Crystal Structure Of A Plant Cysteine Protease Ervatamin-C Refinement With Cdna Derived Amino Acid Sequence Length = 208 Back     alignment and structure
>pdb|1AEC|A Chain A, Crystal Structure Of Actinidin-E-64 Complex+ Length = 218 Back     alignment and structure
>pdb|3BCN|A Chain A, Crystal Structure Of A Papain-Like Cysteine Protease Ervatamin-A Complexed With Irreversible Inhibitor E-64 Length = 209 Back     alignment and structure
>pdb|1O0E|A Chain A, 1.9 Angstrom Crystal Structure Of A Plant Cysteine Protease Ervatamin C Length = 208 Back     alignment and structure
>pdb|2ACT|A Chain A, Crystallographic Refinement Of The Structure Of Actinidin At 1.7 Angstroms Resolution By Fast Fourier Least-Squares Methods Length = 220 Back     alignment and structure
>pdb|1PPO|A Chain A, Determination Of The Structure Of Papaya Protease Omega Length = 216 Back     alignment and structure
>pdb|1MEG|A Chain A, Crystal Structure Of A Caricain D158e Mutant In Complex With E-64 Length = 216 Back     alignment and structure
>pdb|1GEC|E Chain E, Glycyl Endopeptidase-complex With Benzyloxycarbonyl-leucine-valine- Glycine-methylene Covalently Bound To Cysteine 25 Length = 216 Back     alignment and structure
>pdb|7PCK|A Chain A, Crystal Structure Of Wild Type Human Procathepsin K Length = 314 Back     alignment and structure
>pdb|3IOQ|A Chain A, Crystal Structure Of The Carica Candamarcensis Cysteine Protease Cms1ms2 In Complex With E-64 Length = 213 Back     alignment and structure
>pdb|1KHP|A Chain A, Monoclinic Form Of Papain/zlfg-dam Covalent Complex Length = 212 Back     alignment and structure
>pdb|1PIP|A Chain A, Crystal Structure Of Papain-Succinyl-Gln-Val-Val-Ala-Ala-P- Nitroanilide Complex At 1.7 Angstroms Resolution: Noncovalent Binding Mode Of A Common Sequence Of Endogenous Thiol Protease Inhibitors Length = 212 Back     alignment and structure
>pdb|1PPP|A Chain A, Crystal Structure Of Papain-E64-C Complex. Binding Diversity Of E64-C To Papain S2 And S3 Subsites Length = 212 Back     alignment and structure
>pdb|1CJL|A Chain A, Crystal Structure Of A Cysteine Protease Proform Length = 312 Back     alignment and structure
>pdb|2CIO|A Chain A, The High Resolution X-Ray Structure Of Papain Complexed With Fragments Of The Trypanosoma Brucei Cysteine Protease Inhibitor Icp Length = 212 Back     alignment and structure
>pdb|3IMA|A Chain A, Complex Strcuture Of Tarocystatin And Papain Length = 212 Back     alignment and structure
>pdb|1STF|E Chain E, The Refined 2.4 Angstroms X-Ray Crystal Structure Of Recombinant Human Stefin B In Complex With The Cysteine Proteinase Papain: A Novel Type Of Proteinase Inhibitor Interaction Length = 212 Back     alignment and structure
>pdb|1CS8|A Chain A, Crystal Structure Of Procathepsin L Length = 316 Back     alignment and structure
>pdb|3QT4|A Chain A, Structure Of Digestive Procathepsin L 3 Of Tenebrio Molitor Larval Midgut Length = 329 Back     alignment and structure
>pdb|2O6X|A Chain A, Crystal Structure Of Procathepsin L1 From Fasciola Hepatica Length = 310 Back     alignment and structure
>pdb|3F75|A Chain A, Activated Toxoplasma Gondii Cathepsin L (Tgcpl) In Complex With Its Propeptide Length = 224 Back     alignment and structure
>pdb|2C0Y|A Chain A, The Crystal Structure Of A Cys25ala Mutant Of Human Procathepsin S Length = 315 Back     alignment and structure
>pdb|3U8E|A Chain A, Crystal Structure Of Cysteine Protease From Bulbs Of Crocus Sativus At 1.3 A Resolution Length = 222 Back     alignment and structure
>pdb|3HWN|A Chain A, Cathepsin L With Az13010160 Length = 258 Back     alignment and structure
>pdb|3H7D|A Chain A, The Crystal Structure Of The Cathepsin K Variant M5 In Compl Chondroitin-4-Sulfate Length = 215 Back     alignment and structure
>pdb|1MEM|A Chain A, Crystal Structure Of Cathepsin K Complexed With A Potent Vinyl Sulfone Inhibitor Length = 215 Back     alignment and structure
>pdb|1U9V|A Chain A, Crystal Structure Of The Cysteine Protease Human Cathepsin K In Complex With The Covalent Inhibitor Nvp-Abe854 Length = 217 Back     alignment and structure
>pdb|1SNK|A Chain A, Cathepsin K Complexed With Carbamate Derivatized Norleucine Aldehyde Length = 214 Back     alignment and structure
>pdb|2F7D|A Chain A, A Mutant Rabbit Cathepsin K With A Nitrile Inhibitor Length = 215 Back     alignment and structure
>pdb|3OVZ|A Chain A, Cathepsin K In Complex With A Covalent Inhibitor With A Ketoamide Warhead Length = 213 Back     alignment and structure
>pdb|1FH0|A Chain A, Crystal Structure Of Human Cathepsin V Complexed With An Irreversible Vinyl Sulfone Inhibitor Length = 221 Back     alignment and structure
>pdb|3OF8|A Chain A, Structural Basis For Reversible And Irreversible Inhibition Of Human Cathepsin L By Their Respective Dipeptidyl Glyoxal And Diazomethylketone Inhibitors Length = 221 Back     alignment and structure
>pdb|3H89|A Chain A, A Combined Crystallographic And Molecular Dynamics Study Of Cathepsin-L Retro-Binding Inhibitors(Compound 4) Length = 220 Back     alignment and structure
>pdb|3HHA|A Chain A, Crystal Structure Of Cathepsin L In Complex With Az12878478 Length = 220 Back     alignment and structure
>pdb|1VSN|A Chain A, Crystal Structure Of A Potent Small Molecule Inhibitor Bound To Cathepsin K Length = 215 Back     alignment and structure
>pdb|2NQD|B Chain B, Crystal Structure Of Cysteine Protease Inhibitor, Chagasin, In Complex With Human Cathepsin L Length = 221 Back     alignment and structure
>pdb|3IV2|A Chain A, Crystal Structure Of Mature Apo-Cathepsin L C25a Mutant Length = 220 Back     alignment and structure
>pdb|3QJ3|A Chain A, Structure Of Digestive Procathepsin L2 Proteinase From Tenebrio Molitor Larval Midgut Length = 331 Back     alignment and structure
>pdb|3H6S|A Chain A, Strucure Of Clitocypin - Cathepsin V Complex Length = 221 Back     alignment and structure
>pdb|3BC3|A Chain A, Exploring Inhibitor Binding At The S Subsites Of Cathepsin L Length = 220 Back     alignment and structure
>pdb|3KSE|A Chain A, Unreduced Cathepsin L In Complex With Stefin A Length = 220 Back     alignment and structure
>pdb|1MS6|A Chain A, Dipeptide Nitrile Inhibitor Bound To Cathepsin S. Length = 222 Back     alignment and structure
>pdb|2F1G|A Chain A, Cathepsin S In Complex With Non-Covalent 2-(Benzoxazol-2-Ylamino)- Acetamide Length = 220 Back     alignment and structure
>pdb|3OVX|A Chain A, Cathepsin S In Complex With A Covalent Inhibitor With An Aldehyde Warhead Length = 218 Back     alignment and structure
>pdb|3N3G|A Chain A, 4-(3-Trifluoromethylphenyl)-Pyrimidine-2-Carbonitrile As Cathepsin S Inhibitors: N3, Not N1 Is Critically Important Length = 217 Back     alignment and structure
>pdb|2FQ9|A Chain A, Cathepsin S With Nitrile Inhibitor Length = 225 Back     alignment and structure
>pdb|2G6D|A Chain A, Human Cathepsin S Mutant With Vinyl Sulfone Inhibitor Cra- 14009 Length = 217 Back     alignment and structure
>pdb|1NPZ|A Chain A, Crystal Structures Of Cathepsin S Inhibitor Complexes Length = 217 Back     alignment and structure
>pdb|2FYE|A Chain A, Mutant Human Cathepsin S With Irreversible Inhibitor Cra- 14013 Length = 217 Back     alignment and structure
>pdb|3IEJ|A Chain A, Pyrazole-Based Cathepsin S Inhibitors With Arylalkynes As P1 Binding Elements Length = 222 Back     alignment and structure
>pdb|3KWN|A Chain A, Cathepsin S In Complex With Thioether Acetamide P3 Inhibitor Length = 219 Back     alignment and structure
>pdb|3MPE|A Chain A, Crystal Structure Of Human Cathepsin-S C25s Mutant With Bound Drug Length = 220 Back     alignment and structure
>pdb|1GLO|A Chain A, Crystal Structure Of Cys25ser Mutant Of Human Cathepsin S Length = 217 Back     alignment and structure
>pdb|2B1M|A Chain A, Crystal Structure Of A Papain-Fold Protein Without The Catalytic Cysteine From Seeds Of Pachyrhizus Erosus Length = 246 Back     alignment and structure
>pdb|8PCH|A Chain A, Crystal Structure Of Porcine Cathepsin H Determined At 2.1 Angstrom Resolution: Location Of The Mini-Chain C-Terminal Carboxyl Group Defines Cathepsin H Aminopeptidase Function Length = 220 Back     alignment and structure
>pdb|2VHS|A Chain A, Cathsilicatein, A Chimera Length = 217 Back     alignment and structure
>pdb|2P7U|A Chain A, The Crystal Structure Of Rhodesain, The Major Cysteine Protease Of T. Brucei Rhodesiense, Bound To Inhibitor K777 Length = 215 Back     alignment and structure
>pdb|1YVB|A Chain A, The Plasmodium Falciparum Cysteine Protease Falcipain-2 Length = 241 Back     alignment and structure
>pdb|1EWP|A Chain A, Cruzain Bound To Mor-Leu-Hpq Length = 215 Back     alignment and structure
>pdb|1ICF|A Chain A, Crystal Structure Of Mhc Class Ii Associated P41 Ii Fragment In Complex With Cathepsin L Length = 175 Back     alignment and structure
>pdb|1AIM|A Chain A, Cruzain Inhibited By Benzoyl-Tyrosine-Alanine-Fluoromethylketone Length = 215 Back     alignment and structure
>pdb|3BPM|A Chain A, Crystal Structure Of Falcipain-3 With Its Inhibitor, Leupeptin Length = 243 Back     alignment and structure
>pdb|3PNR|A Chain A, Structure Of Pbicp-C In Complex With Falcipain-2 Length = 240 Back     alignment and structure
>pdb|3IUT|A Chain A, The Crystal Structure Of Cruzain In Complex With A Tetrafluorophenoxymethyl Ketone Inhibitor Length = 221 Back     alignment and structure
>pdb|3HD3|A Chain A, High Resolution Crystal Structure Of Cruzain Bound To The Vinyl Sulfone Inhibitor Smdc-256047 Length = 215 Back     alignment and structure
>pdb|1MHW|A Chain A, Design Of Non-covalent Inhibitors Of Human Cathepsin L. From The 96- Residue Proregion To Optimized Tripeptides Length = 175 Back     alignment and structure
>pdb|1M6D|A Chain A, Crystal Structure Of Human Cathepsin F Length = 214 Back     alignment and structure
>pdb|1XKG|A Chain A, Crystal Structure Of The Major House Dust Mite Allergen Der P 1 In Its Pro Form At 1.61 A Resolution Length = 312 Back     alignment and structure
>pdb|1JQP|A Chain A, Dipeptidyl Peptidase I (Cathepsin C), A Tetrameric Cysteine Protease Of The Papain Family Length = 438 Back     alignment and structure
>pdb|3D6S|A Chain A, Crystal Structure Of Mite Allergen Der F 1 Length = 223 Back     alignment and structure
>pdb|3PDF|A Chain A, Discovery Of Novel Cyanamide-Based Inhibitors Of Cathepsin C Length = 441 Back     alignment and structure
>pdb|2AS8|A Chain A, Crystal Structure Of Mature And Fully Active Der P 1 Allergen Length = 222 Back     alignment and structure
>pdb|3RVW|A Chain A, Crystal Structure Of Der P 1 Complexed With Fab 4c1 Length = 222 Back     alignment and structure
>pdb|3F5V|A Chain A, C2 Crystal Form Of Mite Allergen Der P 1 Length = 222 Back     alignment and structure
>pdb|1DEU|A Chain A, Crystal Structure Of Human Procathepsin X: A Cysteine Protease With The Proregion Covalently Linked To The Active Site Cysteine Length = 277 Back     alignment and structure
>pdb|1EF7|A Chain A, Crystal Structure Of Human Cathepsin X Length = 242 Back     alignment and structure
>pdb|4HWY|A Chain A, Trypanosoma Brucei Procathepsin B Solved From 40 Fs Free-electron Laser Pulse Data By Serial Femtosecond X-ray Crystallography Length = 340 Back     alignment and structure
>pdb|3HHI|A Chain A, Crystal Structure Of Cathepsin B From T. Brucei In Complex With Ca074 Length = 325 Back     alignment and structure
>pdb|3MOR|A Chain A, Crystal Structure Of Cathepsin B From Trypanosoma Brucei Length = 317 Back     alignment and structure
>pdb|3QSD|A Chain A, Structure Of Cathepsin B1 From Schistosoma Mansoni In Complex With Ca074 Inhibitor Length = 254 Back     alignment and structure
>pdb|1PBH|A Chain A, Crystal Structure Of Human Recombinant Procathepsin B At 3.2 Angstrom Resolution Length = 317 Back     alignment and structure
>pdb|1MIR|A Chain A, Rat Procathepsin B Length = 322 Back     alignment and structure
>pdb|1CPJ|A Chain A, Crystal Structures Of Recombinant Rat Cathepsin B And A Cathepsin B-Inhibitor Complex: Implications For Structure- Based Inhibitor Design Length = 260 Back     alignment and structure
>pdb|1GMY|A Chain A, Cathepsin B Complexed With Dipeptidyl Nitrile Inhibitor Length = 261 Back     alignment and structure
>pdb|1CTE|A Chain A, Crystal Structures Of Recombinant Rat Cathepsin B And A Cathepsin B-Inhibitor Complex: Implications For Structure- Based Inhibitor Design Length = 254 Back     alignment and structure
>pdb|1K3B|B Chain B, Crystal Structure Of Human Dipeptidyl Peptidase I (Cathepsin C): Exclusion Domain Added To An Endopeptidase Framework Creates The Machine For Activation Of Granular Serine Proteases Length = 164 Back     alignment and structure
>pdb|3AI8|B Chain B, Cathepsin B In Complex With The Nitroxoline Length = 256 Back     alignment and structure
>pdb|3K9M|A Chain A, Cathepsin B In Complex With Stefin A Length = 254 Back     alignment and structure
>pdb|3CBJ|A Chain A, Chagasin-cathepsin B Complex Length = 266 Back     alignment and structure
>pdb|1ITO|A Chain A, Crystal Structure Analysis Of Bovine Spleen Cathepsin B- E64c Complex Length = 256 Back     alignment and structure
>pdb|3F75|P Chain P, Activated Toxoplasma Gondii Cathepsin L (Tgcpl) In Complex With Its Propeptide Length = 106 Back     alignment and structure
>pdb|1QDQ|A Chain A, X-Ray Crystal Structure Of Bovine Cathepsin B-Ca074 Complex Length = 253 Back     alignment and structure
>pdb|1K3B|C Chain C, Crystal Structure Of Human Dipeptidyl Peptidase I (Cathepsin C): Exclusion Domain Added To An Endopeptidase Framework Creates The Machine For Activation Of Granular Serine Proteases Length = 69 Back     alignment and structure
>pdb|2WBF|X Chain X, Crystal Structure Analysis Of Sera5e From Plasmodium Falciparum With Loop 690-700 Ordered Length = 265 Back     alignment and structure
>pdb|3CH2|X Chain X, Crystal Structure Analysis Of Sera5e From Plasmodium Falciparum Length = 265 Back     alignment and structure
>pdb|1SP4|B Chain B, Crystal Structure Of Ns-134 In Complex With Bovine Cathepsin B: A Two Headed Epoxysuccinyl Inhibitor Extends Along The Whole Active Site Cleft Length = 205 Back     alignment and structure
>pdb|1HUC|B Chain B, The Refined 2.15 Angstroms X-Ray Crystal Structure Of Human Liver Cathepsin B: The Structural Basis For Its Specificity Length = 205 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query350
1pci_A322 Procaricain; zymogen, hydrolase, thiol protease; 3 0.0
2c0y_A315 Procathepsin S; proenzyme, proteinase, hydrolase, 0.0
1by8_A314 Protein (procathepsin K); hydrolase(sulfhydryl pro 0.0
3qj3_A331 Cathepsin L-like protein; hydrolase, proteinase, l 1e-178
2o6x_A310 Procathepsin L1, secreted cathepsin L 1; hydrolase 1e-175
3qt4_A329 Cathepsin-L-like midgut cysteine proteinase; hydro 1e-175
1cs8_A316 Human procathepsin L; prosegment, propeptide, inhi 1e-174
1xkg_A312 DER P I, major mite fecal allergen DER P 1; major 1e-172
1ppo_A216 Protease omega; hydrolase(thiol protease); 1.80A { 1e-153
1s4v_A229 Cysteine endopeptidase; KDEL ER retention signal, 1e-152
3p5u_A220 Actinidin; SAD, cysteine proteinases, hydrolase; 1 1e-151
2fo5_A262 Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cyst 1e-151
2cio_A212 Papain; hydrolase/inhibitor, complex hydrolase/inh 1e-151
1cqd_A221 Protein (protease II); cysteine protease, glycopro 1e-150
3ioq_A213 CMS1MS2; caricaceae, cysteine protease, papain fam 1e-150
2bdz_A214 Mexicain; cysteine protease, peptidase_C1, papain- 1e-150
1iwd_A215 Ervatamin B; cysteine protease, alpha-beta protein 1e-149
1yal_A218 Chymopapain; hydrolase, thiol protease; 1.70A {Car 1e-149
3f75_A224 Toxopain-2, cathepsin L protease; medical structur 1e-145
3bwk_A243 Cysteine protease falcipain-3; malaria, hydrolase; 1e-144
2b1m_A246 SPE31; papain-like, sugar binding protein; HET: NA 1e-142
2oul_A241 Falcipain 2; cysteine protease, inhibitor, macromo 1e-142
3ovx_A218 Cathepsin S; hydrolase, covalent inhibitor, aldehy 1e-139
3i06_A215 Cruzipain; autocatalytic cleavage, glycoprotein, p 1e-139
8pch_A220 Cathepsin H; hydrolase, protease, cysteine protein 1e-139
3kwz_A215 Cathepsin K; enzyme inhibitor, covalent reversible 1e-137
1m6d_A214 Cathepsin F, catsf; papain family cysteine proteas 1e-133
2xu3_A220 Cathepsin L1; hydrolase, drug design, thiol protea 1e-133
3f5v_A222 DER P 1 allergen; allergy, asthma, DUST mites, gly 1e-132
1o0e_A208 Ervatamin C; plant cysteine protease, two domain, 1e-131
3pdf_A441 Cathepsin C, dipeptidyl peptidase 1; two domains, 1e-120
2wbf_X265 Serine-repeat antigen protein; SERA, malaria, vacu 1e-116
3u8e_A222 Papain-like cysteine protease; papain-like cystein 1e-110
1deu_A277 Procathepsin X; cysteine protease, proregion, pros 1e-101
3hhi_A325 Cathepsin B-like cysteine protease; occluding loop 1e-101
3qsd_A254 Cathepsin B-like peptidase (C01 family); cysteine 1e-92
3pbh_A317 Procathepsin B; thiol protease, cysteine protease, 2e-89
3ois_A291 Cysteine protease; alpha and beta, hydrolase; HET: 7e-81
3cbj_A266 Cathepsin B; cathepsin B, occluding loop, chagas d 1e-75
3f75_P106 Toxopain-2, cathepsin L propeptide; medical struct 3e-35
2l95_A80 Crammer, LP06209P; cysteine proteinase inhibitor, 2e-26
3pw3_A 383 Aminopeptidase C; bleomycin, cysteine proteinase f 4e-10
3pw3_A383 Aminopeptidase C; bleomycin, cysteine proteinase f 1e-05
>1pci_A Procaricain; zymogen, hydrolase, thiol protease; 3.20A {Carica papaya} SCOP: d.3.1.1 Length = 322 Back     alignment and structure
 Score =  563 bits (1453), Expect = 0.0
 Identities = 175/323 (54%), Positives = 225/323 (69%), Gaps = 2/323 (0%)

Query: 27  DFSIVGYSPEHLTSMDKLIELFESWMSKHGKTYKCIEEKLHRFEIFKENLKHIDQRNKEV 86
           DFSIVGYS + LTS ++LI+LF SWM  H K Y+ ++EKL+RFEIFK+NL +ID+ NK+ 
Sbjct: 1   DFSIVGYSQDDLTSTERLIQLFNSWMLNHNKFYENVDEKLYRFEIFKDNLNYIDETNKKN 60

Query: 87  TSYWLGLNEFADMSHEEFKNKYLGLKPQFPTRRQPSAEFSYRDVKALPKSVDWRKKGAVT 146
            SYWLGLNEFAD+S++EF  KY+G        +    EF   D+  LP++VDWRKKGAVT
Sbjct: 61  NSYWLGLNEFADLSNDEFNEKYVGSLIDATIEQSYDEEFINEDIVNLPENVDWRKKGAVT 120

Query: 147 PVKNQGSCGSCWAFSTVAAVEGINQIVSGNLTSLSEQELIDCDTSFNNGCNGGLMDYAFK 206
           PV++QGSCGSCWAFS VA VEGIN+I +G L  LSEQEL+DC+   ++GC GG   YA +
Sbjct: 121 PVRHQGSCGSCWAFSAVATVEGINKIRTGKLVELSEQELVDCERR-SHGCKGGYPPYALE 179

Query: 207 YIVASGGLHKEEDYPYLMEEGTCEDKKEEMEVVTISGYQDVPENDEQSLLKALAHQPVSV 266
           Y+    G+H    YPY  ++GTC  K+    +V  SG   V  N+E +LL A+A QPVSV
Sbjct: 180 YVA-KNGIHLRSKYPYKAKQGTCRAKQVGGPIVKTSGVGRVQPNNEGNLLNAIAKQPVSV 238

Query: 267 AIEASGTDFQFYSGGVFTGPCGAELDHGVAAVGYGKSKGSDYIIVKNSWGPKWGERGYIR 326
            +E+ G  FQ Y GG+F GPCG ++D  V AVGYGKS G  YI++KNSWG  WGE+GYIR
Sbjct: 239 VVESKGRPFQLYKGGIFEGPCGTKVDGAVTAVGYGKSGGKGYILIKNSWGTAWGEKGYIR 298

Query: 327 MKRNTGKPEGLCGINKMASIPLK 349
           +KR  G   G+CG+ K +  P K
Sbjct: 299 IKRAPGNSPGVCGLYKSSYYPTK 321
>2c0y_A Procathepsin S; proenzyme, proteinase, hydrolase, thiol protease, prosegment binding loop, glycoprotein, lysosome, protease, zymogen; 2.1A {Homo sapiens} Length = 315 Back     alignment and structure
>1by8_A Protein (procathepsin K); hydrolase(sulfhydryl proteinase), papain; 2.60A {Homo sapiens} SCOP: d.3.1.1 PDB: 7pck_A Length = 314 Back     alignment and structure
>3qj3_A Cathepsin L-like protein; hydrolase, proteinase, larVal midgut; 1.85A {Tenebrio molitor} Length = 331 Back     alignment and structure
>2o6x_A Procathepsin L1, secreted cathepsin L 1; hydrolase, thiol protease, cysteine protease, zymogen, hydro; 1.40A {Fasciola hepatica} Length = 310 Back     alignment and structure
>3qt4_A Cathepsin-L-like midgut cysteine proteinase; hydrolase, zymogen, intramolecular DISS bonds, insect larVal midgut; HET: PG4 PG6; 2.11A {Tenebrio molitor} Length = 329 Back     alignment and structure
>1cs8_A Human procathepsin L; prosegment, propeptide, inhibition, hydrolase; HET: OCS; 1.80A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cjl_A 3hwn_A* Length = 316 Back     alignment and structure
>1xkg_A DER P I, major mite fecal allergen DER P 1; major allergen, cysteine protease, house DUST mite, dermatop pteronyssinus; 1.61A {Dermatophagoides pteronyssinus} SCOP: d.3.1.1 Length = 312 Back     alignment and structure
>1ppo_A Protease omega; hydrolase(thiol protease); 1.80A {Carica papaya} SCOP: d.3.1.1 PDB: 1meg_A* Length = 216 Back     alignment and structure
>1s4v_A Cysteine endopeptidase; KDEL ER retention signal, endosperm, ricinosomes, SEED germi senescence, hydrolase-hydrolase inhibitor complex; 2.00A {Ricinus communis} SCOP: d.3.1.1 Length = 229 Back     alignment and structure
>2fo5_A Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cysteine endoprotease, endopeptidase, LEUP hydrolase; HET: AR7; 2.20A {Hordeum vulgare} Length = 262 Back     alignment and structure
>2cio_A Papain; hydrolase/inhibitor, complex hydrolase/inhibitor, ICP, cysteine protease, allergen, protease, thiol protease; 1.5A {Carica papaya} PDB: 1khq_A 1khp_A 1ppn_A 3e1z_B 3ima_A 3lfy_A 9pap_A 1bqi_A* 1bp4_A* 1pad_A 1pe6_A* 1pip_A* 1pop_A* 1ppd_A 1ppp_A* 1stf_E* 2pad_A 4pad_A* 5pad_A* 6pad_A* ... Length = 212 Back     alignment and structure
>1cqd_A Protein (protease II); cysteine protease, glycoprotein, proline specificity, carboh papain family, hydrolase; HET: NAG FUL FUC; 2.10A {Zingiber officinale} SCOP: d.3.1.1 Length = 221 Back     alignment and structure
>3ioq_A CMS1MS2; caricaceae, cysteine protease, papain family, hydrolase; HET: E64 SO4; 1.87A {Carica candamarcensis} Length = 213 Back     alignment and structure
>2bdz_A Mexicain; cysteine protease, peptidase_C1, papain-like, HYDR; HET: E64; 2.10A {Jacaratia mexicana} Length = 214 Back     alignment and structure
>1iwd_A Ervatamin B; cysteine protease, alpha-beta protein, catalytic DYAD, L-DOM domain., hydrolase; 1.63A {Tabernaemontana divaricata} SCOP: d.3.1.1 Length = 215 Back     alignment and structure
>1yal_A Chymopapain; hydrolase, thiol protease; 1.70A {Carica papaya} SCOP: d.3.1.1 PDB: 1gec_E* Length = 218 Back     alignment and structure
>3f75_A Toxopain-2, cathepsin L protease; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} Length = 224 Back     alignment and structure
>3bwk_A Cysteine protease falcipain-3; malaria, hydrolase; HET: C1P; 2.42A {Plasmodium falciparum} PDB: 3bpm_A* Length = 243 Back     alignment and structure
>2b1m_A SPE31; papain-like, sugar binding protein; HET: NAG FUC PG4; 2.00A {Pachyrhizus erosus} PDB: 2b1n_A* Length = 246 Back     alignment and structure
>2oul_A Falcipain 2; cysteine protease, inhibitor, macromolecular interaction, HY hydrolase inhibitor complex; 2.20A {Plasmodium falciparum} SCOP: d.3.1.1 PDB: 2ghu_A 1yvb_A 3bpf_A* 3pnr_A Length = 241 Back     alignment and structure
>3ovx_A Cathepsin S; hydrolase, covalent inhibitor, aldehyde warhead is covalently bound to Cys25, lysosomeal protein; HET: O64; 1.49A {Homo sapiens} PDB: 2h7j_A* 2f1g_A* 2hh5_B* 2hhn_A* 2hxz_A* 2op3_A* 2frq_A* 2fra_A* 2fq9_A* 2ft2_A* 2fud_A* 2g7y_A* 1ms6_A* 2r9m_A* 2r9n_A* 2r9o_A* 3n3g_A* 3n4c_A* 3mpe_A* 1nqc_A* ... Length = 218 Back     alignment and structure
>3i06_A Cruzipain; autocatalytic cleavage, glycoprotein, protease, thiol protease, zymogen; HET: QL2; 1.10A {Trypanosoma cruzi} PDB: 1ewm_A* 1ewo_A* 1ewl_A* 1f29_A* 1ewp_A* 1f2b_A* 1f2c_A* 1f2a_A* 1me4_A* 1u9q_X* 2aim_A* 2efm_A* 2oz2_A* 1me3_A* 3kku_A* 3lxs_A* 1aim_A* 3iut_A* 3hd3_A* 2p86_A* ... Length = 215 Back     alignment and structure
>8pch_A Cathepsin H; hydrolase, protease, cysteine proteinase, aminopeptidase; HET: NAG BMA; 2.10A {Sus scrofa} SCOP: d.3.1.1 PDB: 1nb3_A* 1nb5_A* Length = 220 Back     alignment and structure
>3kwz_A Cathepsin K; enzyme inhibitor, covalent reversible inhibitor, disease mutation, disulfide bond, glycoprotein, hydrolase, lysosome, protease; HET: KWZ; 1.49A {Homo sapiens} PDB: 1au0_A* 1au2_A* 1au3_A* 1au4_A* 1ayu_A* 1ayv_A* 1ayw_A* 1bgo_A* 1atk_A* 1nl6_A* 1nlj_A* 1q6k_A* 1mem_A* 1yk7_A* 1yk8_A* 1yt7_A* 2ato_A* 2aux_A* 2auz_A* 2bdl_A* ... Length = 215 Back     alignment and structure
>1m6d_A Cathepsin F, catsf; papain family cysteine protease, hydrolase; HET: MYP; 1.70A {Homo sapiens} SCOP: d.3.1.1 Length = 214 Back     alignment and structure
>2xu3_A Cathepsin L1; hydrolase, drug design, thiol protease; HET: XU3 BTB; 0.90A {Homo sapiens} PDB: 2xu4_A* 2xu5_A* 2yj2_A* 2yj8_A* 2yj9_A* 2yjb_A* 2yjc_A* 3bc3_A* 3h89_A* 3h8b_A* 3h8c_A* 3of9_A* 3of8_A* 3hha_A* 2xu1_A* 3iv2_A* 3k24_A* 2nqd_B* 3kse_A* 2vhs_A ... Length = 220 Back     alignment and structure
>1o0e_A Ervatamin C; plant cysteine protease, two domain, stable at PH 2-12, HYDR; 1.90A {Tabernaemontana divaricata} SCOP: d.3.1.1 PDB: 2pns_A* 2pre_A* 3bcn_A* Length = 208 Back     alignment and structure
>3pdf_A Cathepsin C, dipeptidyl peptidase 1; two domains, cystein protease, hydrolase-hydrolase inhibitor; HET: LXV NAG; 1.85A {Homo sapiens} PDB: 1jqp_A* 2djf_B* 1k3b_B* 2djg_B* 2djf_A* 1k3b_A* 2djg_A* 2djf_C* 1k3b_C* 2djg_C* Length = 441 Back     alignment and structure
>2wbf_X Serine-repeat antigen protein; SERA, malaria, vacuole, protease, cathepsin, hydrolase, glycoprotein, thiol protease; HET: DMS; 1.60A {Plasmodium falciparum} PDB: 3ch3_X 3ch2_X Length = 265 Back     alignment and structure
>3u8e_A Papain-like cysteine protease; papain-like cysteine peptidase, peptidase_C1A, hydrolase, in form; 1.31A {Crocus sativus} Length = 222 Back     alignment and structure
>1deu_A Procathepsin X; cysteine protease, proregion, prosegment, HY; 1.70A {Homo sapiens} SCOP: d.3.1.1 PDB: 1ef7_A Length = 277 Back     alignment and structure
>3hhi_A Cathepsin B-like cysteine protease; occluding loop, hydrolase, THIO protease; HET: 074; 1.60A {Trypanosoma brucei} PDB: 3mor_A* Length = 325 Back     alignment and structure
>3qsd_A Cathepsin B-like peptidase (C01 family); cysteine peptidase, digestive tract, hydrolase-hydrolase INH complex; HET: 074; 1.30A {Schistosoma mansoni} PDB: 3s3q_A* 3s3r_A* Length = 254 Back     alignment and structure
>3pbh_A Procathepsin B; thiol protease, cysteine protease, proenzyme, papain; 2.50A {Homo sapiens} SCOP: d.3.1.1 PDB: 2pbh_A 1pbh_A 1mir_A Length = 317 Back     alignment and structure
>3ois_A Cysteine protease; alpha and beta, hydrolase; HET: UDP; 1.65A {Xylella fastidiosa} Length = 291 Back     alignment and structure
>3cbj_A Cathepsin B; cathepsin B, occluding loop, chagas disease, glyco hydrolase, lysosome, protease, thiol protease, zymogen, CYT vesicle; 1.80A {Homo sapiens} PDB: 3cbk_A 1gmy_A* 3ai8_B* 3k9m_A 1the_A* 1cpj_A* 1cte_A 2dcc_A* 2dc6_A* 1ito_A* 2dc8_A* 2dc9_A* 2dca_A* 2dcb_A* 2dc7_A* 2dcd_A* 1qdq_A* 1csb_B* 1huc_B 2ipp_B ... Length = 266 Back     alignment and structure
>3f75_P Toxopain-2, cathepsin L propeptide; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} Length = 106 Back     alignment and structure
>2l95_A Crammer, LP06209P; cysteine proteinase inhibitor, intrinsic disorder P like protein, hydrolase; NMR {Drosophila melanogaster} Length = 80 Back     alignment and structure
>3pw3_A Aminopeptidase C; bleomycin, cysteine proteinase fold, structural genomics, JO center for structural genomics, JCSG; HET: MSE; 2.23A {Parabacteroides distasonis} Length = 383 Back     alignment and structure
>3pw3_A Aminopeptidase C; bleomycin, cysteine proteinase fold, structural genomics, JO center for structural genomics, JCSG; HET: MSE; 2.23A {Parabacteroides distasonis} Length = 383 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query350
3tnx_A363 Papain; hydrolase, cytoplasm for recombinant expre 100.0
1pci_A322 Procaricain; zymogen, hydrolase, thiol protease; 3 100.0
3qj3_A331 Cathepsin L-like protein; hydrolase, proteinase, l 100.0
3qt4_A329 Cathepsin-L-like midgut cysteine proteinase; hydro 100.0
1by8_A314 Protein (procathepsin K); hydrolase(sulfhydryl pro 100.0
2c0y_A315 Procathepsin S; proenzyme, proteinase, hydrolase, 100.0
1cs8_A316 Human procathepsin L; prosegment, propeptide, inhi 100.0
2o6x_A310 Procathepsin L1, secreted cathepsin L 1; hydrolase 100.0
1xkg_A312 DER P I, major mite fecal allergen DER P 1; major 100.0
3pdf_A441 Cathepsin C, dipeptidyl peptidase 1; two domains, 100.0
3hhi_A325 Cathepsin B-like cysteine protease; occluding loop 100.0
3p5u_A220 Actinidin; SAD, cysteine proteinases, hydrolase; 1 100.0
1ppo_A216 Protease omega; hydrolase(thiol protease); 1.80A { 100.0
1cqd_A221 Protein (protease II); cysteine protease, glycopro 100.0
1yal_A218 Chymopapain; hydrolase, thiol protease; 1.70A {Car 100.0
1iwd_A215 Ervatamin B; cysteine protease, alpha-beta protein 100.0
1s4v_A229 Cysteine endopeptidase; KDEL ER retention signal, 100.0
2fo5_A262 Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cyst 100.0
3u8e_A222 Papain-like cysteine protease; papain-like cystein 100.0
3pbh_A317 Procathepsin B; thiol protease, cysteine protease, 100.0
2cio_A212 Papain; hydrolase/inhibitor, complex hydrolase/inh 100.0
2bdz_A214 Mexicain; cysteine protease, peptidase_C1, papain- 100.0
3kwz_A215 Cathepsin K; enzyme inhibitor, covalent reversible 100.0
3ioq_A213 CMS1MS2; caricaceae, cysteine protease, papain fam 100.0
1o0e_A208 Ervatamin C; plant cysteine protease, two domain, 100.0
3ovx_A218 Cathepsin S; hydrolase, covalent inhibitor, aldehy 100.0
2b1m_A246 SPE31; papain-like, sugar binding protein; HET: NA 100.0
2xu3_A220 Cathepsin L1; hydrolase, drug design, thiol protea 100.0
2oul_A241 Falcipain 2; cysteine protease, inhibitor, macromo 100.0
3f75_A224 Toxopain-2, cathepsin L protease; medical structur 100.0
3bwk_A243 Cysteine protease falcipain-3; malaria, hydrolase; 100.0
8pch_A220 Cathepsin H; hydrolase, protease, cysteine protein 100.0
3i06_A215 Cruzipain; autocatalytic cleavage, glycoprotein, p 100.0
1m6d_A214 Cathepsin F, catsf; papain family cysteine proteas 100.0
3f5v_A222 DER P 1 allergen; allergy, asthma, DUST mites, gly 100.0
3cbj_A266 Cathepsin B; cathepsin B, occluding loop, chagas d 100.0
3qsd_A254 Cathepsin B-like peptidase (C01 family); cysteine 100.0
1deu_A277 Procathepsin X; cysteine protease, proregion, pros 100.0
2wbf_X265 Serine-repeat antigen protein; SERA, malaria, vacu 100.0
3ois_A291 Cysteine protease; alpha and beta, hydrolase; HET: 100.0
2cb5_A453 Protein (bleomycin hydrolase); aminopeptidase, cys 100.0
2e01_A457 Cysteine proteinase 1; bleomycin hydrolase, thiol 100.0
3pw3_A383 Aminopeptidase C; bleomycin, cysteine proteinase f 100.0
3f75_P106 Toxopain-2, cathepsin L propeptide; medical struct 99.77
2l95_A80 Crammer, LP06209P; cysteine proteinase inhibitor, 99.7
1pxv_A183 Cysteine protease; hydrolase; 1.80A {Staphylococcu 97.71
1x9y_A367 Cysteine proteinase; half-barrel, barrel-sandwich- 97.47
1cv8_A174 Staphopain; cysteine protease, thiol protease, pap 97.19
3erv_A236 Putative C39-like peptidase; structural genomics, 91.19
>3tnx_A Papain; hydrolase, cytoplasm for recombinant expression; 2.62A {Carica papaya} Back     alignment and structure
Probab=100.00  E-value=6.4e-88  Score=642.36  Aligned_cols=321  Identities=52%  Similarity=0.919  Sum_probs=274.7

Q ss_pred             hhcccccccCCCCCcCCChhHHHHHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHhccCCCcEEEEcccCCCCChH
Q 018781           23 SLAHDFSIVGYSPEHLTSMDKLIELFESWMSKHGKTYKCIEEKLHRFEIFKENLKHIDQRNKEVTSYWLGLNEFADMSHE  102 (350)
Q Consensus        23 ~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~k~Y~~~~E~~~R~~if~~n~~~I~~~N~~~~s~~~g~N~fsDlt~~  102 (350)
                      .=..++|++.|.++-+.+++++.++|++||++|+|.|.+.+|+.+|++||++|+++|++||+++.+|++|+|+|+|||.+
T Consensus        41 ~~~~~~s~~~y~~~dl~s~~~~~~lf~~f~~~~~K~Y~~~~E~~~R~~iF~~Nl~~I~~~N~~~~sy~~g~N~FaDlT~e  120 (363)
T 3tnx_A           41 DDKMDFSIVGYSQNDLTSTERLIQLFESWMLKHNKIYKNIDEKIYRFEIFKDNLKYIDETNKKNNSYWLGLNVFADMSND  120 (363)
T ss_dssp             -------------CCSSCHHHHHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHTTSCCSEEECSCTTTTSCHH
T ss_pred             CCcccccccCCChhhhcCHHHHHHHHHHHHHHcCCcCCCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEeccccccCCHH
Confidence            33456888999999999999999999999999999999999999999999999999999999989999999999999999


Q ss_pred             hHhhhhcCCCCCCCCCCC-CCCcccccccCCCCCeeeccCCCCCCccccCCCCcchHHHHHHHHHHHHHHHHcCCCcccC
Q 018781          103 EFKNKYLGLKPQFPTRRQ-PSAEFSYRDVKALPKSVDWRKKGAVTPVKNQGSCGSCWAFSTVAAVEGINQIVSGNLTSLS  181 (350)
Q Consensus       103 E~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~lE~~~~~~~~~~~~lS  181 (350)
                      ||++++++.......... ...........+||++||||++|.|+||||||.||||||||+++++|++++++++..+.||
T Consensus       121 Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~s~DWR~~g~VtpVkdQG~CGSCWAFsa~~alE~~~~i~tg~~~~LS  200 (363)
T 3tnx_A          121 EFKEKYTGSIAGNYTTTELSYEEVLNDGDVNIPEYVDWRQKGAVTPVKNQGSCGSAWAFSAVSTIESIIKIRTGNLNEYS  200 (363)
T ss_dssp             HHHHHHSCSSCSCCCCSSSSSSCCCCCSCCCCCSCEEGGGGTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBC
T ss_pred             HHHHHhcccccccccccccccccccCcccCCCCcceecccCCCCCCCccCCcCCchhhhhhcccHHHHHHHHcCCCCCcC
Confidence            999998875443321111 1111111223479999999999999999999999999999999999999999999999999


Q ss_pred             hHHhhhhcCCCCCCCCCCchHHHHHHHHHhCCCCCCCCCccccCCCccCCCccCceeEEEeeeEecCCCcHHHHHHHHhc
Q 018781          182 EQELIDCDTSFNNGCNGGLMDYAFKYIVASGGLHKEEDYPYLMEEGTCEDKKEEMEVVTISGYQDVPENDEQSLLKALAH  261 (350)
Q Consensus       182 ~q~l~~c~~~~~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~v~~~~~~~i~~al~~  261 (350)
                      ||+|+||... +.||+||.+..|++|+.++ ||++|++|||.+.++.|...........+.++..++..++..++.+|++
T Consensus       201 eQ~LvdC~~~-~~GC~GG~~~~a~~yi~~~-Gi~~e~~yPY~~~~~~c~~~~~~~~~~~~~~~~~~~~~~e~~l~~~v~~  278 (363)
T 3tnx_A          201 EQELLDCDRR-SYGCNGGYPWSALQLVAQY-GIHYRNTYPYEGVQRYCRSREKGPYAAKTDGVRQVQPYNEGALLYSIAN  278 (363)
T ss_dssp             HHHHHHHCTT-SCTTBCCCHHHHHHHHHHT-CBCBTTTSCCCSSCCCCCGGGGCSCSBCCCEEEEECSSCHHHHHHHHTT
T ss_pred             HHHHhcccCC-CCCCCCCChHHHHhHHHhc-CccccccCCCcCcCCCcccCCCCCceeeccceEEcchhhHHHHHHHHHc
Confidence            9999999874 7899999999999999876 9999999999998888875544445566778888888889999999999


Q ss_pred             CCcEEEEeecCcccccccCCeeeCCCCCCCCeEEEEEEEeecCCeeEEEEEcCCCCCCCCCceEEEEecCCCCCCccccc
Q 018781          262 QPVSVAIEASGTDFQFYSGGVFTGPCGAELDHGVAAVGYGKSKGSDYIIVKNSWGPKWGERGYIRMKRNTGKPEGLCGIN  341 (350)
Q Consensus       262 GPV~v~i~~~~~~f~~y~~Giy~~~~~~~~~Hav~iVGyg~~~g~~ywivkNSWG~~WG~~GY~~i~~~~~~~~~~CgI~  341 (350)
                      |||+|++++..++|+.|++|||..+|+..++|||+|||||+    +|||||||||++|||+|||||+||.++..|+|||+
T Consensus       279 gPvsvai~a~~~~F~~Y~sGVy~~~~~~~lnHaV~iVGyG~----~YWIVKNSWGt~WGe~GY~rI~Rg~~~~~~~CGI~  354 (363)
T 3tnx_A          279 QPVSVVLEAAGKDFQLYRGGIFVGPCGNKVDHAVAAVGYGP----NYILIRNSWGTGWGENGYIRIKRGTGNSYGVCGLY  354 (363)
T ss_dssp             SCEEEEECCCSHHHHTEEEEEECCCCCSCCCEEEEEEEEET----TEEEEECSBCTTSTBTTEEEEECCSCCSSCGGGTT
T ss_pred             CCcEEEEEecchhhhCCCCCEECCCCCCCCCeEEEEEEcCC----CcEEEEeCCCCccccCcEEEEEcCCCCCCCcCCcc
Confidence            99999999877899999999999999888999999999986    69999999999999999999999998777899999


Q ss_pred             ccccceec
Q 018781          342 KMASIPLK  349 (350)
Q Consensus       342 ~~~~~p~~  349 (350)
                      +.|+||+.
T Consensus       355 ~~a~yPik  362 (363)
T 3tnx_A          355 TSSFYPVK  362 (363)
T ss_dssp             SCEEEEEC
T ss_pred             ceeeeccc
Confidence            99999984
>1pci_A Procaricain; zymogen, hydrolase, thiol protease; 3.20A {Carica papaya} SCOP: d.3.1.1 Back     alignment and structure
>3qj3_A Cathepsin L-like protein; hydrolase, proteinase, larVal midgut; 1.85A {Tenebrio molitor} SCOP: d.3.1.0 Back     alignment and structure
>3qt4_A Cathepsin-L-like midgut cysteine proteinase; hydrolase, zymogen, intramolecular DISS bonds, insect larVal midgut; HET: PG4 PG6; 2.11A {Tenebrio molitor} Back     alignment and structure
>1by8_A Protein (procathepsin K); hydrolase(sulfhydryl proteinase), papain; 2.60A {Homo sapiens} SCOP: d.3.1.1 PDB: 7pck_A Back     alignment and structure
>2c0y_A Procathepsin S; proenzyme, proteinase, hydrolase, thiol protease, prosegment binding loop, glycoprotein, lysosome, protease, zymogen; 2.1A {Homo sapiens} Back     alignment and structure
>1cs8_A Human procathepsin L; prosegment, propeptide, inhibition, hydrolase; HET: OCS; 1.80A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cjl_A 3hwn_A* Back     alignment and structure
>2o6x_A Procathepsin L1, secreted cathepsin L 1; hydrolase, thiol protease, cysteine protease, zymogen, hydro; 1.40A {Fasciola hepatica} Back     alignment and structure
>1xkg_A DER P I, major mite fecal allergen DER P 1; major allergen, cysteine protease, house DUST mite, dermatop pteronyssinus; 1.61A {Dermatophagoides pteronyssinus} SCOP: d.3.1.1 Back     alignment and structure
>3pdf_A Cathepsin C, dipeptidyl peptidase 1; two domains, cystein protease, hydrolase-hydrolase inhibitor; HET: LXV NAG; 1.85A {Homo sapiens} PDB: 1jqp_A* 2djf_B* 1k3b_B* 2djg_B* 2djf_A* 1k3b_A* 2djg_A* 2djf_C* 1k3b_C* 2djg_C* Back     alignment and structure
>3hhi_A Cathepsin B-like cysteine protease; occluding loop, hydrolase, THIO protease; HET: 074; 1.60A {Trypanosoma brucei} SCOP: d.3.1.0 PDB: 4hwy_A* 3mor_A* Back     alignment and structure
>1ppo_A Protease omega; hydrolase(thiol protease); 1.80A {Carica papaya} SCOP: d.3.1.1 PDB: 1meg_A* Back     alignment and structure
>1cqd_A Protein (protease II); cysteine protease, glycoprotein, proline specificity, carboh papain family, hydrolase; HET: NAG FUL FUC; 2.10A {Zingiber officinale} SCOP: d.3.1.1 Back     alignment and structure
>1yal_A Chymopapain; hydrolase, thiol protease; 1.70A {Carica papaya} SCOP: d.3.1.1 PDB: 1gec_E* Back     alignment and structure
>1iwd_A Ervatamin B; cysteine protease, alpha-beta protein, catalytic DYAD, L-DOM domain., hydrolase; 1.63A {Tabernaemontana divaricata} SCOP: d.3.1.1 Back     alignment and structure
>1s4v_A Cysteine endopeptidase; KDEL ER retention signal, endosperm, ricinosomes, SEED germi senescence, hydrolase-hydrolase inhibitor complex; 2.00A {Ricinus communis} SCOP: d.3.1.1 Back     alignment and structure
>2fo5_A Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cysteine endoprotease, endopeptidase, LEUP hydrolase; HET: AR7; 2.20A {Hordeum vulgare} Back     alignment and structure
>3u8e_A Papain-like cysteine protease; papain-like cysteine peptidase, peptidase_C1A, hydrolase, in form; 1.31A {Crocus sativus} SCOP: d.3.1.0 Back     alignment and structure
>3pbh_A Procathepsin B; thiol protease, cysteine protease, proenzyme, papain; 2.50A {Homo sapiens} SCOP: d.3.1.1 PDB: 2pbh_A 1pbh_A 1mir_A Back     alignment and structure
>2cio_A Papain; hydrolase/inhibitor, complex hydrolase/inhibitor, ICP, cysteine protease, allergen, protease, thiol protease; 1.5A {Carica papaya} PDB: 1khq_A 1khp_A 1ppn_A 3e1z_B 3ima_A 3lfy_A 9pap_A 1bqi_A* 1bp4_A* 1pad_A 1pe6_A* 1pip_A* 1pop_A* 1ppd_A 1ppp_A* 1stf_E* 2pad_A 4pad_A* 5pad_A* 6pad_A* ... Back     alignment and structure
>2bdz_A Mexicain; cysteine protease, peptidase_C1, papain-like, HYDR; HET: E64; 2.10A {Jacaratia mexicana} Back     alignment and structure
>3kwz_A Cathepsin K; enzyme inhibitor, covalent reversible inhibitor, disease mutation, disulfide bond, glycoprotein, hydrolase, lysosome, protease; HET: KWZ; 1.49A {Homo sapiens} PDB: 1au0_A* 1au2_A* 1au3_A* 1au4_A* 1ayu_A* 1ayv_A* 1ayw_A* 1bgo_A* 1atk_A* 1nl6_A* 1nlj_A* 1q6k_A* 1mem_A* 1yk7_A* 1yk8_A* 1yt7_A* 2ato_A* 2aux_A* 2auz_A* 2bdl_A* ... Back     alignment and structure
>3ioq_A CMS1MS2; caricaceae, cysteine protease, papain family, hydrolase; HET: E64 SO4; 1.87A {Carica candamarcensis} SCOP: d.3.1.1 Back     alignment and structure
>1o0e_A Ervatamin C; plant cysteine protease, two domain, stable at PH 2-12, HYDR; 1.90A {Tabernaemontana divaricata} SCOP: d.3.1.1 PDB: 2pns_A* 2pre_A* 3bcn_A* Back     alignment and structure
>3ovx_A Cathepsin S; hydrolase, covalent inhibitor, aldehyde warhead is covalently bound to Cys25, lysosomeal protein; HET: O64; 1.49A {Homo sapiens} SCOP: d.3.1.1 PDB: 2h7j_A* 2f1g_A* 2hh5_B* 2hhn_A* 2hxz_A* 2op3_A* 2frq_A* 2fra_A* 2fq9_A* 2ft2_A* 2fud_A* 2g7y_A* 1ms6_A* 2r9m_A* 2r9n_A* 2r9o_A* 3n3g_A* 3n4c_A* 3mpe_A* 1nqc_A* ... Back     alignment and structure
>2b1m_A SPE31; papain-like, sugar binding protein; HET: NAG FUC PG4; 2.00A {Pachyrhizus erosus} PDB: 2b1n_A* Back     alignment and structure
>2xu3_A Cathepsin L1; hydrolase, drug design, thiol protease; HET: XU3 BTB; 0.90A {Homo sapiens} PDB: 2xu4_A* 2xu5_A* 2yj2_A* 2yj8_A* 2yj9_A* 2yjb_A* 2yjc_A* 3bc3_A* 3h89_A* 3h8b_A* 3h8c_A* 3of9_A* 3of8_A* 3hha_A* 2xu1_A* 3iv2_A* 3k24_A* 2nqd_B* 3kse_A* 2vhs_A ... Back     alignment and structure
>2oul_A Falcipain 2; cysteine protease, inhibitor, macromolecular interaction, HY hydrolase inhibitor complex; 2.20A {Plasmodium falciparum} SCOP: d.3.1.1 PDB: 2ghu_A 1yvb_A 3bpf_A* 3pnr_A Back     alignment and structure
>3f75_A Toxopain-2, cathepsin L protease; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} SCOP: d.3.1.0 Back     alignment and structure
>3bwk_A Cysteine protease falcipain-3; malaria, hydrolase; HET: C1P; 2.42A {Plasmodium falciparum} PDB: 3bpm_A* Back     alignment and structure
>8pch_A Cathepsin H; hydrolase, protease, cysteine proteinase, aminopeptidase; HET: NAG BMA; 2.10A {Sus scrofa} SCOP: d.3.1.1 PDB: 1nb3_A* 1nb5_A* Back     alignment and structure
>3i06_A Cruzipain; autocatalytic cleavage, glycoprotein, protease, thiol protease, zymogen; HET: QL2; 1.10A {Trypanosoma cruzi} SCOP: d.3.1.1 PDB: 1ewm_A* 1ewo_A* 1ewl_A* 1f29_A* 1ewp_A* 1f2b_A* 1f2c_A* 1f2a_A* 1me4_A* 1u9q_X* 2aim_A* 2efm_A* 2oz2_A* 1me3_A* 3kku_A* 3lxs_A* 1aim_A* 3iut_A* 3hd3_A* 2p86_A* ... Back     alignment and structure
>1m6d_A Cathepsin F, catsf; papain family cysteine protease, hydrolase; HET: MYP; 1.70A {Homo sapiens} SCOP: d.3.1.1 Back     alignment and structure
>3cbj_A Cathepsin B; cathepsin B, occluding loop, chagas disease, glyco hydrolase, lysosome, protease, thiol protease, zymogen, CYT vesicle; 1.80A {Homo sapiens} PDB: 3cbk_A 1gmy_A* 3ai8_B* 3k9m_A 1the_A* 1cpj_A* 1cte_A 2dcc_A* 2dc6_A* 1ito_A* 2dc8_A* 2dc9_A* 2dca_A* 2dcb_A* 2dc7_A* 2dcd_A* 1qdq_A* 1csb_B* 1huc_B 2ipp_B ... Back     alignment and structure
>3qsd_A Cathepsin B-like peptidase (C01 family); cysteine peptidase, digestive tract, hydrolase-hydrolase INH complex; HET: 074; 1.30A {Schistosoma mansoni} SCOP: d.3.1.0 PDB: 3s3q_A* 3s3r_A* Back     alignment and structure
>1deu_A Procathepsin X; cysteine protease, proregion, prosegment, HY; 1.70A {Homo sapiens} SCOP: d.3.1.1 PDB: 1ef7_A Back     alignment and structure
>2wbf_X Serine-repeat antigen protein; SERA, malaria, vacuole, protease, cathepsin, hydrolase, glycoprotein, thiol protease; HET: DMS; 1.60A {Plasmodium falciparum} PDB: 3ch3_X 3ch2_X Back     alignment and structure
>3ois_A Cysteine protease; alpha and beta, hydrolase; HET: UDP; 1.65A {Xylella fastidiosa} Back     alignment and structure
>2cb5_A Protein (bleomycin hydrolase); aminopeptidase, cysteine protease, SELF- compartmentalizing, cylinase; 1.85A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cb5_A Back     alignment and structure
>2e01_A Cysteine proteinase 1; bleomycin hydrolase, thiol protease, C1 protease, hydrolase; 1.73A {Saccharomyces cerevisiae} PDB: 2e02_A 2e03_A 2dzy_A 1a6r_A 2e00_A 2dzz_A 3gcb_A 1gcb_A Back     alignment and structure
>3pw3_A Aminopeptidase C; bleomycin, cysteine proteinase fold, structural genomics, JO center for structural genomics, JCSG; HET: MSE; 2.23A {Parabacteroides distasonis} Back     alignment and structure
>3f75_P Toxopain-2, cathepsin L propeptide; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} Back     alignment and structure
>2l95_A Crammer, LP06209P; cysteine proteinase inhibitor, intrinsic disorder P like protein, hydrolase; NMR {Drosophila melanogaster} Back     alignment and structure
>1pxv_A Cysteine protease; hydrolase; 1.80A {Staphylococcus aureus} SCOP: d.3.1.1 PDB: 1y4h_A Back     alignment and structure
>1x9y_A Cysteine proteinase; half-barrel, barrel-sandwich-hybrid, hydrolase; 2.50A {Staphylococcus aureus} SCOP: d.3.1.1 d.17.1.4 Back     alignment and structure
>1cv8_A Staphopain; cysteine protease, thiol protease, papain family; HET: E64; 1.75A {Staphylococcus aureus} SCOP: d.3.1.1 Back     alignment and structure
>3erv_A Putative C39-like peptidase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.10A {Bacillus anthracis} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 350
d1cs8a_316 d.3.1.1 (A:) (Pro)cathepsin L {Human (Homo sapiens 8e-79
d1yala_218 d.3.1.1 (A:) Chymopapain {Papaya (Carica papaya) [ 4e-75
d1s4va_224 d.3.1.1 (A:) Vignain (bean endopeptidase) {Castor 6e-75
d1cqda_216 d.3.1.1 (A:) Proline-specific cysteine protease {G 3e-73
d1ppoa_216 d.3.1.1 (A:) Caricain (protease omega) {Papaya (Ca 8e-71
d1o0ea_208 d.3.1.1 (A:) Ervatamin C {East indian rosebay (Erv 6e-69
d1xkga1302 d.3.1.1 (A:4-305) Major mite fecal allergen der p 1e-68
d1aeca_218 d.3.1.1 (A:) Actinidin {Chinese gooseberry or kiwi 2e-68
d1iwda_215 d.3.1.1 (A:) Ervatamin B {Adam's apple (Ervatamia 7e-68
d2oula1241 d.3.1.1 (A:-16-224) Falcipain 2 {Plasmodium falcip 3e-66
d2h7ja1217 d.3.1.1 (A:1-217) (Pro)cathepsin S {Human (Homo sa 3e-65
d1khqa_212 d.3.1.1 (A:) Papain {Papaya (Carica papaya) [TaxId 4e-64
d1fh0a_221 d.3.1.1 (A:) (Pro)cathepsin V {Human (Homo sapiens 1e-62
d2r6na1215 d.3.1.1 (A:1-215) (Pro)cathepsin K {Human (Homo sa 1e-62
g8pch.1228 d.3.1.1 (P:,A:) Cathepsin H {Pig (Sus scrofa) [Tax 3e-62
d1m6da_214 d.3.1.1 (A:) Cathepsin F {Human (Homo sapiens) [Ta 8e-62
d1gmya_254 d.3.1.1 (A:) (Pro)cathepsin B {Human (Homo sapiens 7e-58
d1me4a_215 d.3.1.1 (A:) Cruzain {Trypanosoma cruzi [TaxId: 56 1e-55
d1deua_275 d.3.1.1 (A:) (Pro)cathepsin X {Human (Homo sapiens 8e-52
g1k3b.1233 d.3.1.1 (B:,C:) Cathepsin C (dipeptidyl peptidase 2e-50
d3gcba_458 d.3.1.1 (A:) Bleomycin hydrolase {Baker's yeast (S 1e-04
>d1cs8a_ d.3.1.1 (A:) (Pro)cathepsin L {Human (Homo sapiens) [TaxId: 9606]} Length = 316 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: Cysteine proteinases
superfamily: Cysteine proteinases
family: Papain-like
domain: (Pro)cathepsin L
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  242 bits (617), Expect = 8e-79
 Identities = 130/323 (40%), Positives = 175/323 (54%), Gaps = 21/323 (6%)

Query: 38  LTSMDKLIELFESWMSKHGKTYKCIEEKLHRFEIFKENLKHIDQRNKEV----TSYWLGL 93
           LT    L   +  W + H + Y   EE   R  ++++N+K I+  N+E      S+ + +
Sbjct: 2   LTFDHSLEAQWTKWKAMHNRLYGMNEEG-WRRAVWEKNMKMIELHNQEYREGKHSFTMAM 60

Query: 94  NEFADMSHEEFKNKYLGLKPQFPTRRQPSAEFSYRDVKALPKSVDWRKKGAVTPVKNQGS 153
           N F DM+ EEF+    G + +   + +    F        P+SVDWR+KG VTPVKNQG 
Sbjct: 61  NAFGDMTSEEFRQVMNGFQNR---KPRKGKVFQEPLFYEAPRSVDWREKGYVTPVKNQGQ 117

Query: 154 CGSCWAFSTVAAVEGINQIVSGNLTSLSEQELIDCDTS-FNNGCNGGLMDYAFKYIVASG 212
           CGSCWAFS   A+EG     +G L SLSEQ L+DC     N GCNGGLMDYAF+Y+  +G
Sbjct: 118 CGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDNG 177

Query: 213 GLHKEEDYPYLMEEGTCEDKKEEMEVVTISGYQDVPENDEQSLLKALAHQ-PVSVAIEAS 271
           GL  EE YPY  E      K      V            E++L+KA+A   P+SVAI+A 
Sbjct: 178 GLDSEESYPY--EATEESCKYNPKYSVANDAGFVDIPKQEKALMKAVATVGPISVAIDAG 235

Query: 272 GTDFQFYSGGVFTGP-CGAE-LDHGVAAVGYG----KSKGSDYIIVKNSWGPKWGERGYI 325
              F FY  G++  P C +E +DHGV  VGYG    +S  + Y +VKNSWG +WG  GY+
Sbjct: 236 HESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYV 295

Query: 326 RMKRNTGKPEGLCGINKMASIPL 348
           +M ++       CGI   AS P 
Sbjct: 296 KMAKD---RRNHCGIASAASYPT 315
>d1yala_ d.3.1.1 (A:) Chymopapain {Papaya (Carica papaya) [TaxId: 3649]} Length = 218 Back     information, alignment and structure
>d1s4va_ d.3.1.1 (A:) Vignain (bean endopeptidase) {Castor bean (Ricinus communis) [TaxId: 3988]} Length = 224 Back     information, alignment and structure
>d1cqda_ d.3.1.1 (A:) Proline-specific cysteine protease {Ginger rhizome (Zingiber officinale) [TaxId: 94328]} Length = 216 Back     information, alignment and structure
>d1ppoa_ d.3.1.1 (A:) Caricain (protease omega) {Papaya (Carica papaya) [TaxId: 3649]} Length = 216 Back     information, alignment and structure
>d1o0ea_ d.3.1.1 (A:) Ervatamin C {East indian rosebay (Ervatamia coronaria) [TaxId: 52861]} Length = 208 Back     information, alignment and structure
>d1xkga1 d.3.1.1 (A:4-305) Major mite fecal allergen der p 1 {House-dust mite (Dermatophagoides pteronyssinus) [TaxId: 6956]} Length = 302 Back     information, alignment and structure
>d1aeca_ d.3.1.1 (A:) Actinidin {Chinese gooseberry or kiwifruit (Actinidia chinensis) [TaxId: 3625]} Length = 218 Back     information, alignment and structure
>d1iwda_ d.3.1.1 (A:) Ervatamin B {Adam's apple (Ervatamia coronaria) [TaxId: 52861]} Length = 215 Back     information, alignment and structure
>d2oula1 d.3.1.1 (A:-16-224) Falcipain 2 {Plasmodium falciparum [TaxId: 5833]} Length = 241 Back     information, alignment and structure
>d2h7ja1 d.3.1.1 (A:1-217) (Pro)cathepsin S {Human (Homo sapiens) [TaxId: 9606]} Length = 217 Back     information, alignment and structure
>d1khqa_ d.3.1.1 (A:) Papain {Papaya (Carica papaya) [TaxId: 3649]} Length = 212 Back     information, alignment and structure
>d1fh0a_ d.3.1.1 (A:) (Pro)cathepsin V {Human (Homo sapiens) [TaxId: 9606]} Length = 221 Back     information, alignment and structure
>d2r6na1 d.3.1.1 (A:1-215) (Pro)cathepsin K {Human (Homo sapiens) [TaxId: 9606]} Length = 215 Back     information, alignment and structure
>d1m6da_ d.3.1.1 (A:) Cathepsin F {Human (Homo sapiens) [TaxId: 9606]} Length = 214 Back     information, alignment and structure
>d1gmya_ d.3.1.1 (A:) (Pro)cathepsin B {Human (Homo sapiens) [TaxId: 9606]} Length = 254 Back     information, alignment and structure
>d1me4a_ d.3.1.1 (A:) Cruzain {Trypanosoma cruzi [TaxId: 5693]} Length = 215 Back     information, alignment and structure
>d1deua_ d.3.1.1 (A:) (Pro)cathepsin X {Human (Homo sapiens) [TaxId: 9606]} Length = 275 Back     information, alignment and structure
>d3gcba_ d.3.1.1 (A:) Bleomycin hydrolase {Baker's yeast (Saccharomyces cerevisiae), Gal6 [TaxId: 4932]} Length = 458 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query350
d1cs8a_316 (Pro)cathepsin L {Human (Homo sapiens) [TaxId: 960 100.0
d1xkga1302 Major mite fecal allergen der p 1 {House-dust mite 100.0
d1ppoa_216 Caricain (protease omega) {Papaya (Carica papaya) 100.0
d1yala_218 Chymopapain {Papaya (Carica papaya) [TaxId: 3649]} 100.0
d1cqda_216 Proline-specific cysteine protease {Ginger rhizome 100.0
d2oula1241 Falcipain 2 {Plasmodium falciparum [TaxId: 5833]} 100.0
d1s4va_224 Vignain (bean endopeptidase) {Castor bean (Ricinus 100.0
d1khqa_212 Papain {Papaya (Carica papaya) [TaxId: 3649]} 100.0
d2h7ja1217 (Pro)cathepsin S {Human (Homo sapiens) [TaxId: 960 100.0
d2r6na1215 (Pro)cathepsin K {Human (Homo sapiens) [TaxId: 960 100.0
d1iwda_215 Ervatamin B {Adam's apple (Ervatamia coronaria) [T 100.0
g8pch.1228 Cathepsin H {Pig (Sus scrofa) [TaxId: 9823]} 100.0
d1aeca_218 Actinidin {Chinese gooseberry or kiwifruit (Actini 100.0
d1fh0a_221 (Pro)cathepsin V {Human (Homo sapiens) [TaxId: 960 100.0
d1o0ea_208 Ervatamin C {East indian rosebay (Ervatamia corona 100.0
d1m6da_214 Cathepsin F {Human (Homo sapiens) [TaxId: 9606]} 100.0
d1me4a_215 Cruzain {Trypanosoma cruzi [TaxId: 5693]} 100.0
g1k3b.1233 Cathepsin C (dipeptidyl peptidase I), catalytic do 100.0
d1deua_275 (Pro)cathepsin X {Human (Homo sapiens) [TaxId: 960 100.0
d1gmya_254 (Pro)cathepsin B {Human (Homo sapiens) [TaxId: 960 100.0
d3gcba_ 458 Bleomycin hydrolase {Baker's yeast (Saccharomyces 99.76
d2cb5a_ 453 Bleomycin hydrolase {Human (Homo sapiens) [TaxId: 99.68
d1pxva_183 Staphopain SspB {Staphylococcus aureus [TaxId: 128 97.06
d1cv8a_173 Staphopain StpA {Staphylococcus aureus [TaxId: 128 96.66
>d1cs8a_ d.3.1.1 (A:) (Pro)cathepsin L {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Cysteine proteinases
superfamily: Cysteine proteinases
family: Papain-like
domain: (Pro)cathepsin L
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-77  Score=565.60  Aligned_cols=300  Identities=42%  Similarity=0.810  Sum_probs=255.2

Q ss_pred             hhHHHHHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHhccC----CCcEEEEcccCCCCChHhHhhhhcCCCCCCC
Q 018781           41 MDKLIELFESWMSKHGKTYKCIEEKLHRFEIFKENLKHIDQRNKE----VTSYWLGLNEFADMSHEEFKNKYLGLKPQFP  116 (350)
Q Consensus        41 ~~~~~~~f~~~~~~~~k~Y~~~~E~~~R~~if~~n~~~I~~~N~~----~~s~~~g~N~fsDlt~~E~~~~~~~~~~~~~  116 (350)
                      +..++.+|++||++|+|+|++ +|+.+|++||.+|+++|++||++    +.+|++|+|+|+|||.+||.++++..+....
T Consensus         5 ~~~l~~~F~~f~~~~~K~Y~~-~ee~~R~~iF~~N~~~I~~~N~~~~~~~~~~~~g~N~fsDlt~eEf~~~~~~~~~~~~   83 (316)
T d1cs8a_           5 DHSLEAQWTKWKAMHNRLYGM-NEEGWRRAVWEKNMKMIELHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQNRKP   83 (316)
T ss_dssp             CGGGHHHHHHHHHHTTCCCCT-THHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECCCTTTTCCHHHHHHHHCCBCCCCC
T ss_pred             cHHHHHHHHHHHHHhCCcCCC-HHHHHHHHHHHHHHHHHHHHHhHhhcCCCceEEeceeccccCcHHHHhhhcccccccc
Confidence            466788999999999999976 57789999999999999999985    3799999999999999999998876443321


Q ss_pred             CCCCCCCcccccccCCCCCeeeccCCCCCCccccCCCCcchHHHHHHHHHHHHHHHHcCCCcccChHHhhhhcCC-CCCC
Q 018781          117 TRRQPSAEFSYRDVKALPKSVDWRKKGAVTPVKNQGSCGSCWAFSTVAAVEGINQIVSGNLTSLSEQELIDCDTS-FNNG  195 (350)
Q Consensus       117 ~~~~~~~~~~~~~~~~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~lE~~~~~~~~~~~~lS~q~l~~c~~~-~~~g  195 (350)
                      ..   ..........+||++||||++|+|+||||||.||||||||+++++|++++++++..+.||+|+|+||+.. ++.+
T Consensus        84 ~~---~~~~~~~~~~~lP~s~Dwr~~g~vtpVkdQG~CGsCwAfa~~~~~E~~~~i~~~~~~~lS~Q~lvdC~~~~~~~~  160 (316)
T d1cs8a_          84 RK---GKVFQEPLFYEAPRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEG  160 (316)
T ss_dssp             SC---CEECCCCTTCCCCSCEEGGGGTCCCCCCBCCSSSCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCGGGTCCG
T ss_pred             cc---CccccCcccccCCCceECCcCCcccccccCCCCceeeehhhhHHHHHHHHhhcCCcccchhhhhhhccccccCCC
Confidence            11   1111122345899999999999999999999999999999999999999999999999999999999864 5788


Q ss_pred             CCCCchHHHHHHHHHhCCCCCCCCCccccCCCccCCCccCceeEEEeeeEecCCCcHHHHHHHH-hcCCcEEEEeecCcc
Q 018781          196 CNGGLMDYAFKYIVASGGLHKEEDYPYLMEEGTCEDKKEEMEVVTISGYQDVPENDEQSLLKAL-AHQPVSVAIEASGTD  274 (350)
Q Consensus       196 C~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~v~~~~~~~i~~al-~~GPV~v~i~~~~~~  274 (350)
                      |.||.+..|++|+..++++.+|.++||.+....|.... ......+..+.... .+.+.|+++| .+|||++++++...+
T Consensus       161 c~gg~~~~a~~y~~~~g~~~~e~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~l~~~l~~~gpv~v~i~~~~~~  238 (316)
T d1cs8a_         161 CNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYNP-KYSVANDAGFVDIP-KQEKALMKAVATVGPISVAIDAGHES  238 (316)
T ss_dssp             GGCBCHHHHHHHHHHHTCEEBTTTSCCCSSCCCCCCCG-GGEEECCCCEEECC-SCHHHHHHHHHHHCCEEEEECCCSHH
T ss_pred             CCCCchHHHHHHHHhcCccccccccccccccccccccc-cccccccccccccc-CcHHHHHHHHHHhCCeEEEEEeccch
Confidence            99999999999999997788999999999888887433 33445555565554 4788888888 679999999997678


Q ss_pred             cccccCCeeeC-CCCC-CCCeEEEEEEEeec----CCeeEEEEEcCCCCCCCCCceEEEEecCCCCCCccccccccccee
Q 018781          275 FQFYSGGVFTG-PCGA-ELDHGVAAVGYGKS----KGSDYIIVKNSWGPKWGERGYIRMKRNTGKPEGLCGINKMASIPL  348 (350)
Q Consensus       275 f~~y~~Giy~~-~~~~-~~~Hav~iVGyg~~----~g~~ywivkNSWG~~WG~~GY~~i~~~~~~~~~~CgI~~~~~~p~  348 (350)
                      |+.|++|||.. .|+. .++|||+|||||.+    ++++|||||||||++|||+|||||+|+..   |+|||++.++||+
T Consensus       239 f~~y~~Gi~~~~~c~~~~~nHaV~iVGyG~d~~~~~g~~YWIikNSWG~~WGe~GY~ri~r~~~---n~CGI~~~~~yP~  315 (316)
T d1cs8a_         239 FLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRR---NHCGIASAASYPT  315 (316)
T ss_dssp             HHTEEEEEECCTTCCSSCCCEEEEEEEEEEECCSSCCEEEEEEECSBCTTSTBTTEEEEECSSS---SGGGTTTSCEEEC
T ss_pred             hccccCCcccCCCCCCCcCCEEEEEEEEcccccCCCCCeEEEEEeCCCCCcccCCEEEEeeCCC---CcCccCCeeeeee
Confidence            99999999976 5653 57999999999964    57899999999999999999999999853   5899999999998


Q ss_pred             c
Q 018781          349 K  349 (350)
Q Consensus       349 ~  349 (350)
                      |
T Consensus       316 v  316 (316)
T d1cs8a_         316 V  316 (316)
T ss_dssp             C
T ss_pred             C
Confidence            6
>d1xkga1 d.3.1.1 (A:4-305) Major mite fecal allergen der p 1 {House-dust mite (Dermatophagoides pteronyssinus) [TaxId: 6956]} Back     information, alignment and structure
>d1ppoa_ d.3.1.1 (A:) Caricain (protease omega) {Papaya (Carica papaya) [TaxId: 3649]} Back     information, alignment and structure
>d1yala_ d.3.1.1 (A:) Chymopapain {Papaya (Carica papaya) [TaxId: 3649]} Back     information, alignment and structure
>d1cqda_ d.3.1.1 (A:) Proline-specific cysteine protease {Ginger rhizome (Zingiber officinale) [TaxId: 94328]} Back     information, alignment and structure
>d1s4va_ d.3.1.1 (A:) Vignain (bean endopeptidase) {Castor bean (Ricinus communis) [TaxId: 3988]} Back     information, alignment and structure
>d1khqa_ d.3.1.1 (A:) Papain {Papaya (Carica papaya) [TaxId: 3649]} Back     information, alignment and structure
>d2h7ja1 d.3.1.1 (A:1-217) (Pro)cathepsin S {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2r6na1 d.3.1.1 (A:1-215) (Pro)cathepsin K {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1iwda_ d.3.1.1 (A:) Ervatamin B {Adam's apple (Ervatamia coronaria) [TaxId: 52861]} Back     information, alignment and structure
>d1aeca_ d.3.1.1 (A:) Actinidin {Chinese gooseberry or kiwifruit (Actinidia chinensis) [TaxId: 3625]} Back     information, alignment and structure
>d1fh0a_ d.3.1.1 (A:) (Pro)cathepsin V {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1o0ea_ d.3.1.1 (A:) Ervatamin C {East indian rosebay (Ervatamia coronaria) [TaxId: 52861]} Back     information, alignment and structure
>d1m6da_ d.3.1.1 (A:) Cathepsin F {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1me4a_ d.3.1.1 (A:) Cruzain {Trypanosoma cruzi [TaxId: 5693]} Back     information, alignment and structure
>d1deua_ d.3.1.1 (A:) (Pro)cathepsin X {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1gmya_ d.3.1.1 (A:) (Pro)cathepsin B {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d3gcba_ d.3.1.1 (A:) Bleomycin hydrolase {Baker's yeast (Saccharomyces cerevisiae), Gal6 [TaxId: 4932]} Back     information, alignment and structure
>d2cb5a_ d.3.1.1 (A:) Bleomycin hydrolase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1pxva_ d.3.1.1 (A:) Staphopain SspB {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1cv8a_ d.3.1.1 (A:) Staphopain StpA {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure