Citrus Sinensis ID: 018813

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350
MDLPSCTSTSLILPLIVLLATSQGVLSATFTFVNKCDYTIWPGILANAGSPRLDSTGFELPQDSSRSFVAPTGWSGRFWGRTRCNFDGSGSGSCLTGDCGSGQVECNGLGAAPPATLAEFTLGSGGQDFYDVSLVDGYNLPMIVESSGGSGLCSTTGCSTDVNRQCPAELRVGEGDACKSACEAFGSAEYCCSGAFNTPATCKPSVYSQVFKSACPKSYSYAYDDATSTFTCTGADYTVTFCPSSSPSQKSSSYSTPVAGATSQQQGAGSGLEYSADGSGSGYPGSGAGTGTGTVTGSGSASGDAMLADGSYLAGLAMGDSTRTASISALQISLVAFAAFSSFVFSFGYL
ccccccHHHHHHHHHHHHHHHHccccEEEEEEEEccccccccEEEcccccccccccccccccccEEEEEcccccccccccccccccccccccccccccccccccccccccccccccEEEEEEccccccccccccccccccccEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHcccccccccccccccEEEEcccEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHccc
ccccccHHHHHHHHHHHHHHHHHcccEEEEEEEccccccEcccccccccccccccccEEcccccEEEEcccccccEEEEEEccEEEccccEEEEccccccccEEEEccccccccccEEEEEEEEccEEEEEEEccccEcccEEEEEccccccccccEEcccccccccHHHEcccccccHcHHHHHccccccccccccccccccccHHHHHHHHHccccEccccccccccEEEEcccEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEcccHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHcc
mdlpsctstsliLPLIVLLATSqgvlsatftfvnkcdytiwpgilanagsprldstgfelpqdssrsfvaptgwsgrfwgrtrcnfdgsgsgscltgdcgsgqvecnglgaappatlaeftlgsggqdfydvslvdgynlpmivessggsglcsttgcstdvnrqcpaelrvgegdaCKSACEAfgsaeyccsgafntpatckpsvysqvfksacpksysyayddatstftctgadytvtfcpssspsqksssystpvagatsqqqgagsgleysadgsgsgypgsgagtgtgtvtgsgsasgdamladgsylaglamgdstrTASISALQISLVAFAAFSSFVFSFGYL
mdlpsctsTSLILPLIVLLATSQGVLSATFTFVNKCDYTIWPGILANAGSPRLDSTGFelpqdssrsfvaptgwsgrfwGRTRCNFDGSGSGSCLTGDCGSGQVECNGLGAAPPATLAEFTLGSGGQDFYDVSLVDGYNLPMIVESSGGSGLCSTTGCSTDVNRQCPAELRVGEGDACKSACEAFGSAEYCCSGAFNTPATCKPSVYSQVFKSACPKSYSYAYDDATSTFTCTGADYTVTFCPSSSPSQKSSSYSTPVAGATSQQQGAGSGLEYSADGSGSGYPGSGAGTGTGTVTGSGSASGDAMLADGSYLAGLAMGDSTRTASISALQISLVAFAAFSSFVFSFGYL
MDLPSCTSTSLILPLIVLLATSQGVLSATFTFVNKCDYTIWPGILANAGSPRLDSTGFELPQDSSRSFVAPTGWSGRFWGRTRCNFDGSGSGSCLTGDCGSGQVECNGLGAAPPATLAEFTLGSGGQDFYDVSLVDGYNLPMIVEssggsglcsttgcstDVNRQCPAELRVGEGDACKSACEAFGSAEYCCSGAFNTPATCKPSVYSQVFKSACPKSYSYAYDDATSTFTCTGADYTVTFCpssspsqksssystpVagatsqqqgagsgLEYsadgsgsgypgsgagtgtgtvtgsgsasgdaMLADGSYLAGLAMGDSTRTASISALQISLvafaafssfvfsfGYL
********TSLILPLIVLLATSQGVLSATFTFVNKCDYTIWPGILANAG******************FVAPTGWSGRFWGRTRCNFDGSGSGSCLTGDC**********************LGSGGQDFYDVSLVDGYNLPMIVESSGGSGLCSTTGCSTDVNRQCPAELRVGEGDACKSACEAFGSAEYCCSGAFNTPATCKPSVYSQVFKSACPKSYSYAYDDATSTFTCTGADYTVTFC*******************************************************************GSYLAGLAMGDSTRTASISALQISLVAFAAFSSFVFSFGY*
**********LILPLIVLLATSQGVLSATFTFVNKCDYTIWPGILANAGSPRLDSTGFELPQDSSRSFVAPTGWSGRFWGRTRCNFDGSGSGSCLTGDCGSGQVECNGLGAAPPATLAEFTLGSGGQDFYDVSLVDGYNLPMIVESSGGSGLCSTTGCSTDVNRQCPAELRVGEGDACKSACEAFGSAEYCCSGAFNTPATCKPSVYSQVFKSACPKSYSYAYDDATSTFTCTGADYTVTFC******************************************************************DGSYL*****************QISLVAFAAFSSFVFSFGYL
MDLPSCTSTSLILPLIVLLATSQGVLSATFTFVNKCDYTIWPGILANAGSPRLDSTGFELPQDSSRSFVAPTGWSGRFWGRTRCNFDGSGSGSCLTGDCGSGQVECNGLGAAPPATLAEFTLGSGGQDFYDVSLVDGYNLPMIVESSGGSGLCSTTGCSTDVNRQCPAELRVGEGDACKSACEAFGSAEYCCSGAFNTPATCKPSVYSQVFKSACPKSYSYAYDDATSTFTCTGADYTVTFC**************************************SGYPGSGAGTGTGTVTGSGSASGDAMLADGSYLAGLAMGDSTRTASISALQISLVAFAAFSSFVFSFGYL
***PSCTSTSLILPLIVLLATSQGVLSATFTFVNKCDYTIWPGILANAGSPRLDSTGFELPQDSSRSFVAPTGWSGRFWGRTRCNFDGSGSGSCLTGDCGSGQVECNGLGAAPPATLAEFTLGSGGQDFYDVSLVDGYNLPMIVESSGGSGLCSTTGCSTDVNRQCPAELRVGEGDACKSACEAFGSAEYCCSGAFNTPATCKPSVYSQVFKSACPKSYSYAYDDATSTFTCTGADYTVTFCPSS**********************************************************DA*LADGSYLAGLAMGDSTRTASISALQISLVAFAAFSSFVFSFGYL
oooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHo
iiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHii
ooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooo
oooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHi
SSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MDLPSCTSTSLILPLIVLLATSQGVLSATFTFVNKCDYTIWPGILANAGSPRLDSTGFELPQDSSRSFVAPTGWSGRFWGRTRCNFDGSGSGSCLTGDCGSGQVECNGLGAAPPATLAEFTLGSGGQDFYDVSLVDGYNLPMIVESSGGSGLCSTTGCSTDVNRQCPAELRVGEGDACKSACEAFGSAEYCCSGAFNTPATCKPSVYSQVFKSACPKSYSYAYDDATSTFTCTGADYTVTFCPSSSPSQKSSSYSTPVAGATSQQQGAGSGLEYSADGSGSGYPGSGAGTGTGTVTGSGSASGDAMLADGSYLAGLAMGDSTRTASISALQISLVAFAAFSSFVFSFGYL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query350 2.2.26 [Sep-21-2011]
Q9FSG7246 Thaumatin-like protein 1a N/A no 0.662 0.943 0.546 7e-71
P28493239 Pathogenesis-related prot no no 0.66 0.966 0.552 1e-69
P83332246 Thaumatin-like protein 1 N/A no 0.628 0.894 0.579 2e-69
O80327244 Thaumatin-like protein 1 N/A no 0.668 0.959 0.554 1e-66
P50694245 Glucan endo-1,3-beta-gluc N/A no 0.665 0.951 0.518 8e-66
P50699243 Thaumatin-like protein OS no no 0.62 0.893 0.553 1e-65
P83336212 Thaumatin-like protein 1b N/A no 0.585 0.966 0.568 2e-65
Q9SMH2243 Thaumatin-like protein 1 N/A no 0.651 0.938 0.531 3e-64
P83335242 Thaumatin-like protein 2 N/A no 0.62 0.896 0.517 2e-59
Q41350252 Osmotin-like protein OS=S N/A no 0.602 0.837 0.497 2e-54
>sp|Q9FSG7|TP1A_MALDO Thaumatin-like protein 1a OS=Malus domestica GN=TL1 PE=1 SV=1 Back     alignment and function desciption
 Score =  267 bits (683), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 130/238 (54%), Positives = 162/238 (68%), Gaps = 6/238 (2%)

Query: 12  ILPLIVLLATSQGVLSATFTFVNKCDYTIWPGILANAGSPRLDSTGFELPQDSSRSFVAP 71
           +L L + +    G  +A  TF N C  T+WPG L     P+L  TGFEL   +SRS  AP
Sbjct: 9   LLGLTLAILFFSGAHAAKITFTNNCPNTVWPGTLTGDQKPQLSLTGFELASKASRSVDAP 68

Query: 72  TGWSGRFWGRTRCNFDGSGSGSCLTGDCGSGQVECNGLGAAPPATLAEFTL-GSGGQDFY 130
           + WSGRFWGRTRC+ D +G  +C T DCGSGQV CNG GA PPATL E T+  +GGQD+Y
Sbjct: 69  SPWSGRFWGRTRCSTDAAGKFTCETADCGSGQVACNGAGAVPPATLVEITIAANGGQDYY 128

Query: 131 DVSLVDGYNLPMIVESSGGSGLCSTTGCSTDVNRQCPAELRVGEGD----ACKSACEAFG 186
           DVSLVDG+NLPM V   GG+G C  + C  +VN+ CPA L+V   D    +CKSAC AFG
Sbjct: 129 DVSLVDGFNLPMSVAPQGGTGECKPSSCPANVNKVCPAPLQVKAADGSVISCKSACLAFG 188

Query: 187 SAEYCCSGAFNTPATCKPSVYSQVFKSACPKSYSYAYDDATSTFTCT-GADYTVTFCP 243
            ++YCC+   NTP TC P+ YS++F+  CP++YSYAYDD  STFTC+ G DY +TFCP
Sbjct: 189 DSKYCCTPPNNTPETCPPTEYSEIFEKQCPQAYSYAYDDKNSTFTCSGGPDYVITFCP 246

Malus domestica (taxid: 3750)
>sp|P28493|PR5_ARATH Pathogenesis-related protein 5 OS=Arabidopsis thaliana GN=At1g75040 PE=1 SV=1 Back     alignment and function description
>sp|P83332|TLP1_PRUPE Thaumatin-like protein 1 OS=Prunus persica PE=2 SV=1 Back     alignment and function description
>sp|O80327|TLP1_PYRPY Thaumatin-like protein 1 OS=Pyrus pyrifolia GN=TL1 PE=1 SV=1 Back     alignment and function description
>sp|P50694|TLP_PRUAV Glucan endo-1,3-beta-glucosidase OS=Prunus avium PE=1 SV=1 Back     alignment and function description
>sp|P50699|TLPH_ARATH Thaumatin-like protein OS=Arabidopsis thaliana GN=At1g18250 PE=2 SV=2 Back     alignment and function description
>sp|P83336|TP1B_MALDO Thaumatin-like protein 1b (Fragment) OS=Malus domestica PE=2 SV=1 Back     alignment and function description
>sp|Q9SMH2|TLP1_CASSA Thaumatin-like protein 1 OS=Castanea sativa GN=TL1 PE=2 SV=1 Back     alignment and function description
>sp|P83335|TLP2_PRUPE Thaumatin-like protein 2 OS=Prunus persica PE=2 SV=1 Back     alignment and function description
>sp|Q41350|OLP1_SOLLC Osmotin-like protein OS=Solanum lycopersicum PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query350
118481123344 unknown [Populus trichocarpa] gi|4293266 0.962 0.979 0.705 1e-129
225427981349 PREDICTED: pathogenesis-related protein 0.982 0.985 0.695 1e-126
255587140338 Zeamatin precursor, putative [Ricinus co 0.854 0.884 0.723 1e-123
118485371342 unknown [Populus trichocarpa] 0.962 0.985 0.694 1e-123
356544806346 PREDICTED: thaumatin-like protein-like [ 0.914 0.924 0.680 1e-118
297801936345 hypothetical protein ARALYDRAFT_912315 [ 0.971 0.985 0.655 1e-117
224105191249 predicted protein [Populus trichocarpa] 0.7 0.983 0.829 1e-115
449458588354 PREDICTED: pathogenesis-related protein 0.951 0.940 0.680 1e-114
21592749345 putative thaumatin-like protein [Arabido 0.942 0.956 0.637 1e-113
449525746354 PREDICTED: LOW QUALITY PROTEIN: pathogen 0.951 0.940 0.677 1e-113
>gi|118481123|gb|ABK92515.1| unknown [Populus trichocarpa] gi|429326650|gb|AFZ78665.1| thaumatin [Populus tomentosa] Back     alignment and taxonomy information
 Score =  468 bits (1204), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 252/357 (70%), Positives = 283/357 (79%), Gaps = 20/357 (5%)

Query: 1   MDLPSCTSTSLI--LPLIVLLATSQGVLSATFTFVNKCDYTIWPGILANAGSPRLDSTGF 58
           MD  SC  +SLI  L L+ L++   GVL+ATFTFVNKC+YT+WPGILANAGSPRLDSTGF
Sbjct: 1   MDHFSCCFSSLISTLVLLFLVSYKGGVLAATFTFVNKCEYTVWPGILANAGSPRLDSTGF 60

Query: 59  ELPQDSSRSFVAPTGWSGRFWGRTRCNFDGSGSGSCLTGDCGSGQVECNGLGAAPPATLA 118
           EL +DSSRSF+APTGWSGRFW RT CNFD SG+GSC TGDCGSGQVECNGLGA+PPATLA
Sbjct: 61  ELLKDSSRSFIAPTGWSGRFWARTGCNFDESGTGSCSTGDCGSGQVECNGLGASPPATLA 120

Query: 119 EFTLGSGGQDFYDVSLVDGYNLPMIVESSGGSGLCSTTGCSTDVNRQCPAELRVGEGDAC 178
           EFTLGSGGQDFYDVSLVDGYNLPM+VE SGGSG+C++TGC +D+NRQCP ELR GEGDAC
Sbjct: 121 EFTLGSGGQDFYDVSLVDGYNLPMVVEGSGGSGMCASTGCVSDLNRQCPQELRSGEGDAC 180

Query: 179 KSACEAFGSAEYCCSGAFNTPATCKPSVYSQVFKSACPKSYSYAYDDATSTFTCTGADYT 238
           KSACEAFGS EYCCSGAFNTPATCKPSVYS++FK+ACPKSYSYAYDDATSTFTC+GADYT
Sbjct: 181 KSACEAFGSPEYCCSGAFNTPATCKPSVYSEMFKAACPKSYSYAYDDATSTFTCSGADYT 240

Query: 239 VTFCP--SSSPSQKSSSYSTPVAGATSQQQGAGSGLEYSADGSGSGYPGSGAGTGTGT-- 294
           VTFCP   SS    S S  T     TSQ  G GSGLEY             AGTG+GT  
Sbjct: 241 VTFCPSSPSSQKSSSYSTPTTEGTTTSQGSGTGSGLEY-------------AGTGSGTES 287

Query: 295 -VTGSGSASGDAMLADGSYLAGLAMGDSTRTASISALQISLVAFAAFSSFVFSFGYL 350
                  + G+ MLADGS+LAGLAMGDS +TAS SALQ +++AF      + SF +L
Sbjct: 288 GAGSGTGSGGETMLADGSWLAGLAMGDSYKTASPSALQSTVMAFTTSLVLIVSFVFL 344

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225427981|ref|XP_002277548.1| PREDICTED: pathogenesis-related protein 5 [Vitis vinifera] gi|297744632|emb|CBI37894.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|255587140|ref|XP_002534154.1| Zeamatin precursor, putative [Ricinus communis] gi|223525781|gb|EEF28230.1| Zeamatin precursor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|118485371|gb|ABK94543.1| unknown [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356544806|ref|XP_003540838.1| PREDICTED: thaumatin-like protein-like [Glycine max] Back     alignment and taxonomy information
>gi|297801936|ref|XP_002868852.1| hypothetical protein ARALYDRAFT_912315 [Arabidopsis lyrata subsp. lyrata] gi|297314688|gb|EFH45111.1| hypothetical protein ARALYDRAFT_912315 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|224105191|ref|XP_002313721.1| predicted protein [Populus trichocarpa] gi|222850129|gb|EEE87676.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449458588|ref|XP_004147029.1| PREDICTED: pathogenesis-related protein 5-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|21592749|gb|AAM64698.1| putative thaumatin-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|449525746|ref|XP_004169877.1| PREDICTED: LOW QUALITY PROTEIN: pathogenesis-related protein 5-like [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query350
TAIR|locus:2121189345 AT4G38660 "AT4G38660" [Arabido 0.691 0.701 0.683 1.4e-97
TAIR|locus:2135882260 TLP1 "AT4G24180" [Arabidopsis 0.614 0.826 0.654 1.4e-80
TAIR|locus:2198641316 AT1G20030 "AT1G20030" [Arabido 0.625 0.693 0.602 7.5e-73
TAIR|locus:2135129301 AT4G36010 "AT4G36010" [Arabido 0.651 0.757 0.575 2.5e-72
TAIR|locus:2005549330 AT1G75800 "AT1G75800" [Arabido 0.665 0.706 0.569 1.8e-71
TAIR|locus:2016442247 AT1G19320 "AT1G19320" [Arabido 0.665 0.943 0.557 4e-67
TAIR|locus:2827805253 AT2G17860 "AT2G17860" [Arabido 0.651 0.901 0.552 6.5e-67
UNIPROTKB|O80327244 TL1 "Thaumatin-like protein 1" 0.665 0.954 0.523 5.8e-66
TAIR|locus:2121204281 AT4G38670 [Arabidopsis thalian 0.662 0.825 0.535 9.4e-66
UNIPROTKB|Q9FSG7246 TL1 "Thaumatin-like protein 1a 0.66 0.939 0.523 4.1e-65
TAIR|locus:2121189 AT4G38660 "AT4G38660" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 913 (326.5 bits), Expect = 1.4e-97, Sum P(2) = 1.4e-97
 Identities = 166/243 (68%), Positives = 189/243 (77%)

Query:     1 MDLPSC-TSTSLILPLIVLLATSQGVLSATFTFVNKCDYTIWPGILANAGSPRLDSTGFE 59
             M+L S   S++L L   VLL  S G   +TFTF N+C YT+WPGIL+NAGSP L +TGFE
Sbjct:     2 MNLSSRRASSTLTLSFTVLLLASTGSYGSTFTFANRCGYTVWPGILSNAGSPTLSTTGFE 61

Query:    60 LPQDSSRSFVAPTGWSGRFWGRTRCNFDGSGSGSCLTGDCGSGQVECNGLGAAPPATLAE 119
             LP+ +SRS  APTGWSGRFW RT C FD SGSG+C TGDCGS  VEC GLGAAPP TLAE
Sbjct:    62 LPKGTSRSLQAPTGWSGRFWARTGCKFDSSGSGTCKTGDCGSNAVECAGLGAAPPVTLAE 121

Query:   120 FTLGSGGQDFYDVSLVDGYNLPMIVEXXXXXXXXXXXXXXXDVNRQCPAELRVGEGDACK 179
             FTLG+GG DFYDVSLVDGYN+PMIVE               D+N QCPAELR G+GDACK
Sbjct:   122 FTLGTGGDDFYDVSLVDGYNIPMIVEVAGGSGQCASTGCTTDLNIQCPAELRFGDGDACK 181

Query:   180 SACEAFGSAEYCCSGAFNTPATCKPSVYSQVFKSACPKSYSYAYDDATSTFTCTGADYTV 239
             SAC AF S EYCCSGA+ TP++C+PSVYS++FK+ACP+SYSYAYDDATSTFTC G DYTV
Sbjct:   182 SACLAFRSPEYCCSGAYATPSSCRPSVYSEMFKAACPRSYSYAYDDATSTFTCAGGDYTV 241

Query:   240 TFC 242
             TFC
Sbjct:   242 TFC 244
GO:0003674 "molecular_function" evidence=ND
GO:0005576 "extracellular region" evidence=ISM
GO:0051707 "response to other organism" evidence=ISS
GO:0031225 "anchored to membrane" evidence=TAS
GO:0009664 "plant-type cell wall organization" evidence=RCA
GO:0010075 "regulation of meristem growth" evidence=RCA
GO:0042545 "cell wall modification" evidence=RCA
GO:0048653 "anther development" evidence=RCA
TAIR|locus:2135882 TLP1 "AT4G24180" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2198641 AT1G20030 "AT1G20030" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2135129 AT4G36010 "AT4G36010" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2005549 AT1G75800 "AT1G75800" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2016442 AT1G19320 "AT1G19320" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2827805 AT2G17860 "AT2G17860" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|O80327 TL1 "Thaumatin-like protein 1" [Pyrus pyrifolia (taxid:3767)] Back     alignment and assigned GO terms
TAIR|locus:2121204 AT4G38670 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q9FSG7 TL1 "Thaumatin-like protein 1a" [Malus x domestica (taxid:3750)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query350
cd09218219 cd09218, TLP-PA, allergenic/antifungal thaumatin-l 1e-120
pfam00314212 pfam00314, Thaumatin, Thaumatin family 1e-113
smart00205218 smart00205, THN, Thaumatin family 7e-95
cd09219229 cd09219, TLP-F, thaumatin-like proteins: basidiomy 1e-44
cd09215157 cd09215, Thaumatin-like, the sweet-tasting protein 2e-42
cd09217151 cd09217, TLP-P, thaumatin and allergenic/antifunga 2e-37
cd08961153 cd08961, GH64-TLP-SF, glycoside hydrolase family 6 3e-33
>gnl|CDD|185757 cd09218, TLP-PA, allergenic/antifungal thaumatin-like proteins: plant and animal homologs Back     alignment and domain information 
 Score =  345 bits (888), Expect = e-120
 Identities = 146/220 (66%), Positives = 168/220 (76%), Gaps = 7/220 (3%)

Query: 29  TFTFVNKCDYTIWPGILANAGSPRLDSTGFELPQDSSRSFVAPTGWSGRFWGRTRCNFDG 88
           TFT  NKC +T+WPGIL NAG P+L   GFEL    SR+  AP+GWSGRFWGRT C+FD 
Sbjct: 1   TFTIYNKCPFTVWPGILGNAGHPQLGGGGFELAPGQSRTIDAPSGWSGRFWGRTGCSFDS 60

Query: 89  SGSGSCLTGDCGSGQVECNGLGAAPPATLAEFTL-GSGGQDFYDVSLVDGYNLPMIVESS 147
           SG GSC TGDCG G +ECNG G APPATLAEFTL GSGGQDFYDVSLVDGYNLP+ +   
Sbjct: 61  SGKGSCATGDCGGG-LECNGAGGAPPATLAEFTLGGSGGQDFYDVSLVDGYNLPVSITPQ 119

Query: 148 GGSGLCSTTGCSTDVNRQCPAELRVGEGD----ACKSACEAFGSAEYCCSGAFNTPATCK 203
           GGSG C T GC  D+N  CPAEL+V        ACKSAC AF + EYCC GA+ TP TCK
Sbjct: 120 GGSGGCRTAGCVADLNAVCPAELQVKNSGGRVVACKSACLAFNTDEYCCRGAYGTPETCK 179

Query: 204 PSVYSQVFKSACPKSYSYAYDDATSTFTC-TGADYTVTFC 242
           P+ YS++FK+ACP++YSYAYDD TSTFTC +GA+Y +TFC
Sbjct: 180 PTTYSRLFKNACPQAYSYAYDDPTSTFTCSSGANYVITFC 219

This subfamily is represented by the thaumatin-like proteins (TLPs), Cherry Allergen Pru Av 2 TLP, Peach PpAZ44 TLP (a propylene-induced TLP in abscission), the Caenorhabditis elegans thaumatin family member (thn-6), and other plant and animal homologs. TLPs are involved in host defense and a wide range of developmental processes in fungi, plants, and animals. Due to their inducible expression by environmental stresses such as pathogen/pest attack, drought and cold, plant TLPs are classified as the pathogenesis-related (PR) protein family 5 (PR5). Several members of the plant TLP family have been reported as food allergens from fruits (i.e., cherry, Pru av 2; bell pepper, Cap a1; tomatoes, Lyc e NP24) and pollen allergens from conifers (i.e., mountain cedar, Jun a 3; Arizona cypress, Cup a3; Japanese cedar, Cry j3). TLPs are three-domain, crescent-fold structures with either an electronegative, electropositive, or neutral cleft occurring between domains I and II. It has been proposed that the antifungal activity of plant PR5 proteins relies on the strong electronegative character of this cleft. Some TLPs hydrolyze the beta-1,3-glucans of the type commonly found in fungal walls. TLPs within this subfamily contain 16 conserved Cys residues. Length = 219
>gnl|CDD|215853 pfam00314, Thaumatin, Thaumatin family Back     alignment and domain information
>gnl|CDD|128501 smart00205, THN, Thaumatin family Back     alignment and domain information
>gnl|CDD|185758 cd09219, TLP-F, thaumatin-like proteins: basidiomycete homologs Back     alignment and domain information
>gnl|CDD|185754 cd09215, Thaumatin-like, the sweet-tasting protein, thaumatin, and thaumatin-like proteins involved in host defense Back     alignment and domain information
>gnl|CDD|185756 cd09217, TLP-P, thaumatin and allergenic/antifungal thaumatin-like proteins: plant homologs Back     alignment and domain information
>gnl|CDD|185752 cd08961, GH64-TLP-SF, glycoside hydrolase family 64 (beta-1,3-glucanases which produce specific pentasaccharide oligomers) and thaumatin-like proteins Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 350
cd09218219 TLP-PA allergenic/antifungal thaumatin-like protei 100.0
smart00205218 THN Thaumatin family. The thaumatin family gathers 100.0
cd09219229 TLP-F thaumatin-like proteins: basidiomycete homol 100.0
PF00314213 Thaumatin: Thaumatin family; InterPro: IPR001938 T 100.0
cd09215157 Thaumatin-like the sweet-tasting protein, thaumati 100.0
cd09217151 TLP-P thaumatin and allergenic/antifungal thaumati 100.0
cd08961153 GH64-TLP-SF glycoside hydrolase family 64 (beta-1, 100.0
PF04681155 Bys1: Blastomyces yeast-phase-specific protein; In 96.96
cd09216353 GH64-LPHase-like glycoside hydrolase family 64: la 95.86
cd09220369 GH64-GluB-like glycoside hydrolase family 64: beta 91.58
>cd09218 TLP-PA allergenic/antifungal thaumatin-like proteins: plant and animal homologs Back     alignment and domain information 
Probab=100.00  E-value=6.6e-84  Score=598.44  Aligned_cols=213  Identities=68%  Similarity=1.325  Sum_probs=203.9

Q ss_pred             EEEEEeCCCCcccceeecCCCCCCCCCCCcccCCCCeEEEEeCCCCceeeeecccccCCCCCCcCccCCccCCcccccCC
Q 018813           29 TFTFVNKCDYTIWPGILANAGSPRLDSTGFELPQDSSRSFVAPTGWSGRFWGRTRCNFDGSGSGSCLTGDCGSGQVECNG  108 (350)
Q Consensus        29 tfTi~N~C~~TVWpgi~~~~G~p~l~~~Gf~L~pG~S~si~vP~~WsGRiWaRTGCsfd~~G~~~C~TGDCGsG~l~C~g  108 (350)
                      +|||+|||+||||||+++++|+|+|..+||+|+||++++|++|.+|+|||||||+|+||+.|+++|+||||| |+|+|++
T Consensus         1 tfti~N~C~~tVWp~~~~~~g~~~l~~gGf~L~~g~s~~~~vp~~WsGriWaRTgC~~~~~g~~~C~TGDCg-g~l~C~g   79 (219)
T cd09218           1 TFTIYNKCPFTVWPGILGNAGHPQLGGGGFELAPGQSRTIDAPSGWSGRFWGRTGCSFDSSGKGSCATGDCG-GGLECNG   79 (219)
T ss_pred             CEEEEECCCCCccceecCCCCCCCCCCCCEEcCCCCeEEEeCCCCcceeeeeccCCCCCCCCccccccCCCC-CeeecCC
Confidence            599999999999999999999999999999999999999999999999999999999999999999999999 8899999


Q ss_pred             CCCCCCcceEEEEec-cCCCceeeeccccccCCccEEEecCCCCCCCcccccCcCcCCCCccccCCCC----Ccccchhh
Q 018813          109 LGAAPPATLAEFTLG-SGGQDFYDVSLVDGYNLPMIVESSGGSGLCSTTGCSTDVNRQCPAELRVGEG----DACKSACE  183 (350)
Q Consensus       109 ~G~~pPaTLAEFTL~-~~g~DfYDVSLVDGyNlPm~I~P~gG~~~C~~~gC~~dln~~CP~eL~v~~g----~~C~SaC~  183 (350)
                      .+++||+|||||||. .+++|||||||||||||||+|+|+++.+.|+.++|.+|||..||.||||++.    ++|||||.
T Consensus        80 ~~g~pP~TlaEftl~~~~~~d~YdvSlVdGfNlP~~i~P~~~~~~C~~~~C~~din~~CP~~L~v~~~~g~vv~C~SaC~  159 (219)
T cd09218          80 AGGAPPATLAEFTLGGSGGQDFYDVSLVDGYNLPVSITPQGGSGGCRTAGCVADLNAVCPAELQVKNSGGRVVACKSACL  159 (219)
T ss_pred             CCCCCCceeEEEEeccCCCCcceeeeeeccccCCEEEEecCCCCCCCCCcccCcccccCCHHHeeccCCCcEeeecCHHH
Confidence            888999999999994 4678999999999999999999987667799999999999999999999743    59999999


Q ss_pred             hcCCccccccCCCCCCCCCCCCcchhHhhhcCCCCcccCCCCCCCceeecC-CceEEEec
Q 018813          184 AFGSAEYCCSGAFNTPATCKPSVYSQVFKSACPKSYSYAYDDATSTFTCTG-ADYTVTFC  242 (350)
Q Consensus       184 afg~~~yCC~G~~~~p~tC~ps~YS~~FK~aCP~AYSYayDD~tStfTC~~-~~Y~VtFC  242 (350)
                      +|++|||||+|+|++|++|+|+.|+++||++||+||+|||||++++|+|++ ++|+|+||
T Consensus       160 ~f~~~~~CC~g~~~~p~~C~pt~ys~~FK~~CP~Aysya~Dd~~s~~tC~~~~~Y~I~FC  219 (219)
T cd09218         160 AFNTDEYCCRGAYGTPETCKPTTYSRLFKNACPQAYSYAYDDPTSTFTCSSGANYVITFC  219 (219)
T ss_pred             hhCCccceecCCCCCCCcCCCcchhHHHHhhCccccccCCCCCCcceEcCCCCCEEEEeC
Confidence            999999999999999999999999999999999999999999999999985 89999999

This subfamily is represented by the thaumatin-like proteins (TLPs), Cherry Allergen Pru Av 2 TLP, Peach PpAZ44 TLP (a propylene-induced TLP in abscission), the Caenorhabditis elegans thaumatin family member (thn-6), and other plant and animal homologs. TLPs are involved in host defense and a wide range of developmental processes in fungi, plants, and animals. Due to their inducible expression by environmental stresses such as pathogen/pest attack, drought and cold, plant TLPs are classified as the pathogenesis-related (PR) protein family 5 (PR5). Several members of the plant TLP family have been reported as food allergens from fruits (i.e., cherry, Pru av 2; bell pepper, Cap a1; tomatoes, Lyc e NP24) and pollen allergens from conifers (i.e., mountain cedar, Jun a 3; Arizona cypress, Cup a3; Japanese cedar, Cry j3). TLPs are three-domain, crescent-fold structures with either an electronegative, ele
>smart00205 THN Thaumatin family Back     alignment and domain information
>cd09219 TLP-F thaumatin-like proteins: basidiomycete homologs Back     alignment and domain information
>PF00314 Thaumatin: Thaumatin family; InterPro: IPR001938 Thaumatin [] is an intensely sweet-tasting protein, 100 000 times sweeter than sucrose on a molar basis [] found in berries from Thaumatococcus daniellii, a tropical flowering plant known as Katemfe, it is induced by attack by viroids, which are single-stranded unencapsulated RNA molecules that do not code for protein Back     alignment and domain information
>cd09215 Thaumatin-like the sweet-tasting protein, thaumatin, and thaumatin-like proteins involved in host defense Back     alignment and domain information
>cd09217 TLP-P thaumatin and allergenic/antifungal thaumatin-like proteins: plant homologs Back     alignment and domain information
>cd08961 GH64-TLP-SF glycoside hydrolase family 64 (beta-1,3-glucanases which produce specific pentasaccharide oligomers) and thaumatin-like proteins Back     alignment and domain information
>PF04681 Bys1: Blastomyces yeast-phase-specific protein; InterPro: IPR006771 The pathogenic dimorphic fungal organism Blastomyces dermatitidis exists as a budding yeast at 37 degrees C and as a mycelium at 25 degrees C Back     alignment and domain information
>cd09216 GH64-LPHase-like glycoside hydrolase family 64: laminaripentaose-producing, beta-1,3-glucanase (LPHase)-like Back     alignment and domain information
>cd09220 GH64-GluB-like glycoside hydrolase family 64: beta-1,3-glucanase B (GluB)-like Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query350
3zs3_A222 High Resolution Structure Of Mal D 2, The Thaumatin 2e-64
2ahn_A222 High Resolution Structure Of A Cherry Allergen Pru 4e-58
1du5_A206 The Crystal Structure Of Zeamatin. Length = 206 5e-39
4h8t_A198 Structure Of Haze Forming Proteins In White Wines: 6e-38
1pcv_A205 Crystal Structure Of Osmotin, A Plant Antifungal Pr 2e-36
1z3q_A200 Resolution Of The Structure Of The Allergenic And A 5e-36
1aun_A208 Pathogenesis-Related Protein 5d From Nicotiana Taba 5e-36
1rqw_A207 Thaumatin Structure At 1.05 A Resolution Length = 2 5e-35
3aok_A207 Crystal Structure Of Sweet-Tasting Protein Thaumati 7e-35
1thv_A207 The Structures Of Three Crystal Forms Of The Sweet 8e-35
1kwn_A207 1.2 A Structure Of Thaumatin Crystallized In Gel Le 1e-34
2blr_A206 Thaumatin Before A High Dose X-Ray "burn" Length = 1e-34
2d8o_A207 Structure Of Vil-Thaumatin Length = 207 2e-34
2i0w_A207 Crystal Structure Analysis Of Np24-I, A Thaumatin-L 1e-33
2d8p_A207 Structure Of Hyper-Vil-Thaumatin Length = 207 5e-33
3g7m_A151 Structure Of The Thaumatin-Like Xylanase Inhibitor 2e-14
>pdb|3ZS3|A Chain A, High Resolution Structure Of Mal D 2, The Thaumatin Like Food Allergen From Apple Length = 222 Back     alignment and structure 
Iteration: 1

 Score =  242 bits (618), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 121/221 (54%), Positives = 147/221 (66%), Gaps = 6/221 (2%)
Query: 28  ATFTFVNKCDYTIWPGILANAGSPRLDSTGFELPQDSSRSFVAPTGWSGRFWGRTRCNFD 87
           A  TF N C  T+WPG L     P+L  TGFEL   +SRS  AP+ WSGRFWGRTRC+ D
Sbjct: 1   AKITFTNNCPNTVWPGTLTGDQKPQLSLTGFELASKASRSVDAPSPWSGRFWGRTRCSTD 60
Query: 88  GSGSGSCLTGDCGSGQVECNGLGAAPPATLAEFTL-GSGGQDFYDVSLVDGYNLPMIVEX 146
            +G  +C T DCGSGQV CNG GA PPATL E T+  +GGQD+YDVSLVDG+NLPM V  
Sbjct: 61  AAGKFTCETADCGSGQVACNGAGAVPPATLVEITIAANGGQDYYDVSLVDGFNLPMSVAP 120
Query: 147 XXXXXXXXXXXXXXDVNRQCPAELRVGEGD----ACKSACEAFGSAEYCCSGAFNTPATC 202
                         +VN+ CPA L+V   D    +CKSAC AFG ++YCC+   NTP TC
Sbjct: 121 QGGTGECKPSSCPANVNKVCPAPLQVKAADGSVISCKSACLAFGDSKYCCTPPNNTPETC 180
Query: 203 KPSVYSQVFKSACPKSYSYAYDDATSTFTCTGA-DYTVTFC 242
            P+ YS++F+  CP++YSYAYDD  STFTC+G  DY +TFC
Sbjct: 181 PPTEYSEIFEKQCPQAYSYAYDDKNSTFTCSGGPDYVITFC 221
>pdb|2AHN|A Chain A, High Resolution Structure Of A Cherry Allergen Pru Av 2 Length = 222 Back     alignment and structure
>pdb|1DU5|A Chain A, The Crystal Structure Of Zeamatin. Length = 206 Back     alignment and structure
>pdb|4H8T|A Chain A, Structure Of Haze Forming Proteins In White Wines: Vitis Vinifera Thaumatin-Like Proteins Length = 198 Back     alignment and structure
>pdb|1PCV|A Chain A, Crystal Structure Of Osmotin, A Plant Antifungal Protein Length = 205 Back     alignment and structure
>pdb|1Z3Q|A Chain A, Resolution Of The Structure Of The Allergenic And Antifungal Banana Fruit Thaumatin-Like Protein At 1.7a Length = 200 Back     alignment and structure
>pdb|1AUN|A Chain A, Pathogenesis-Related Protein 5d From Nicotiana Tabacum Length = 208 Back     alignment and structure
>pdb|1RQW|A Chain A, Thaumatin Structure At 1.05 A Resolution Length = 207 Back     alignment and structure
>pdb|3AOK|A Chain A, Crystal Structure Of Sweet-Tasting Protein Thaumatin Ii Length = 207 Back     alignment and structure
>pdb|1THV|A Chain A, The Structures Of Three Crystal Forms Of The Sweet Protein Thaumatin Length = 207 Back     alignment and structure
>pdb|1KWN|A Chain A, 1.2 A Structure Of Thaumatin Crystallized In Gel Length = 207 Back     alignment and structure
>pdb|2BLR|A Chain A, Thaumatin Before A High Dose X-Ray "burn" Length = 206 Back     alignment and structure
>pdb|2D8O|A Chain A, Structure Of Vil-Thaumatin Length = 207 Back     alignment and structure
>pdb|2I0W|A Chain A, Crystal Structure Analysis Of Np24-I, A Thaumatin-Like Protein Length = 207 Back     alignment and structure
>pdb|2D8P|A Chain A, Structure Of Hyper-Vil-Thaumatin Length = 207 Back     alignment and structure
>pdb|3G7M|A Chain A, Structure Of The Thaumatin-Like Xylanase Inhibitor Tlxi Length = 151 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query350
2ahn_A222 Thaumatin-like protein; allergen; 1.30A {Prunus av 4e-78
1du5_A206 Zeamatin; beta sandwich, antifungal protein; 2.50A 5e-67
2vhk_A206 Thaumatin-I; kinetics of crystallization, chiralit 1e-64
1z3q_A200 Thaumatin-like protein; beta sandwich, antifungal 7e-58
1aun_A208 PR-5D; antifungal protein, pathogenesis-related pr 1e-57
3g7m_A151 Xylanase inhibitor TL-XI; beta-sheets, xylan degra 1e-42
>2ahn_A Thaumatin-like protein; allergen; 1.30A {Prunus avium} Length = 222 Back     alignment and structure
 Score =  237 bits (606), Expect = 4e-78
 Identities = 121/222 (54%), Positives = 145/222 (65%), Gaps = 6/222 (2%)

Query: 28  ATFTFVNKCDYTIWPGILANAGSPRLDSTGFELPQDSSRSFVAPTGWSGRFWGRTRCNFD 87
           AT +F N C Y +WPG L +   P+L +TGFEL   +S     P  W+GRFW RT C+ D
Sbjct: 1   ATISFKNNCPYMVWPGTLTSDQKPQLSTTGFELASQASFQLDTPVPWNGRFWARTGCSTD 60

Query: 88  GSGSGSCLTGDCGSGQVECNGLGAAPPATLAEFTL-GSGGQDFYDVSLVDGYNLPMIVES 146
            SG   C T DC SGQV CNG GA PPATLAEF +   GGQDFYDVSLVDG+NLPM V  
Sbjct: 61  ASGKFVCATADCASGQVMCNGNGAIPPATLAEFNIPAGGGQDFYDVSLVDGFNLPMSVTP 120

Query: 147 SGGSGLCSTTGCSTDVNRQCPAELRV----GEGDACKSACEAFGSAEYCCSGAFNTPATC 202
            GG+G C T  C  +VN  CP+EL+     G   AC SAC  FG+ +YCC+   NTP TC
Sbjct: 121 QGGTGDCKTASCPANVNAVCPSELQKKGSDGSVVACLSACVKFGTPQYCCTPPQNTPETC 180

Query: 203 KPSVYSQVFKSACPKSYSYAYDDATSTFTC-TGADYTVTFCP 243
            P+ YS++F +ACP +YSYAYDD   TFTC  G +Y +TFCP
Sbjct: 181 PPTNYSEIFHNACPDAYSYAYDDKRGTFTCNGGPNYAITFCP 222
>1du5_A Zeamatin; beta sandwich, antifungal protein; 2.50A {Zea mays} SCOP: b.25.1.1 Length = 206 Back     alignment and structure
>2vhk_A Thaumatin-I; kinetics of crystallization, chirality, temperature, microbatch, plant protein, sweet protein; HET: TLA; 0.94A {Thaumatococcus daniellii} PDB: 2blu_A* 2blr_A* 2wbz_A 3n02_A* 3n03_A* 2vhr_A* 1lr2_A* 1lr3_A* 1lxz_A* 1ly0_A* 1pp3_A 1thi_A 2oqn_A* 1kwn_A* 2vi1_A 2vi2_A* 2vi3_A* 2vi4_A* 2vu6_A 2vu7_A* ... Length = 206 Back     alignment and structure
>1z3q_A Thaumatin-like protein; beta sandwich, antifungal protein; 1.70A {Musa acuminata} Length = 200 Back     alignment and structure
>1aun_A PR-5D; antifungal protein, pathogenesis-related protein, osmotin, thaumatin-like protein; 1.80A {Nicotiana tabacum} SCOP: b.25.1.1 PDB: 2i0w_A 1pcv_A Length = 208 Back     alignment and structure
>3g7m_A Xylanase inhibitor TL-XI; beta-sheets, xylan degradation, hydrolase inhibitor; HET: GOL; 2.91A {Triticum aestivum} Length = 151 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query350
2ahn_A222 Thaumatin-like protein; allergen; 1.30A {Prunus av 100.0
1du5_A206 Zeamatin; beta sandwich, antifungal protein; 2.50A 100.0
1aun_A208 PR-5D; antifungal protein, pathogenesis-related pr 100.0
2vhk_A206 Thaumatin-I; kinetics of crystallization, chiralit 100.0
1z3q_A200 Thaumatin-like protein; beta sandwich, antifungal 100.0
3g7m_A151 Xylanase inhibitor TL-XI; beta-sheets, xylan degra 100.0
3gd0_A367 Laminaripentaose-producing beta-1,3-guluase (lphas 92.31
4aor_D37 Trypsin inhibitor 3; hydrolase-inhibitor complex, 81.61
>2ahn_A Thaumatin-like protein; allergen; 1.30A {Prunus avium} Back     alignment and structure
Probab=100.00  E-value=3.1e-88  Score=627.13  Aligned_cols=216  Identities=56%  Similarity=1.130  Sum_probs=206.8

Q ss_pred             eEEEEEeCCCCcccceeecCCCCCCCCCCCcccCCCCeEEEEeCCCCceeeeecccccCCCCCCcCccCCccCCcccccC
Q 018813           28 ATFTFVNKCDYTIWPGILANAGSPRLDSTGFELPQDSSRSFVAPTGWSGRFWGRTRCNFDGSGSGSCLTGDCGSGQVECN  107 (350)
Q Consensus        28 ~tfTi~N~C~~TVWpgi~~~~G~p~l~~~Gf~L~pG~S~si~vP~~WsGRiWaRTGCsfd~~G~~~C~TGDCGsG~l~C~  107 (350)
                      ++|||+|||+|||||++++++|+++|..+||+|+||++++|.+|++|+|||||||+|+||++|+++|+|||||+|+|+|+
T Consensus         1 ~t~ti~N~C~~tVWp~~~~~~g~~~l~~gG~~L~~G~s~s~~~p~~WsGRiWgRTgC~~d~~g~~~C~TGdCgsg~l~C~   80 (222)
T 2ahn_A            1 ATISFKNNCPYMVWPGTLTSDQKPQLSTTGFELASQASFQLDTPVPWNGRFWARTGCSTDASGKFVCATADCASGQVMCN   80 (222)
T ss_dssp             CEEEEEECSSSCBEEEEEEGGGCCCCSCSBCCBCTTCEEEEECCSSEEEEEEEEEEEEECTTSCEEEEESCCCSSSSSCT
T ss_pred             CEEEEEeCCCCCCCCEecCCCCCCccCCCcEEcCCCCEEEEecCCCcceeEEeccccCCCCCCCcccccCCccCCceecC
Confidence            58999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCcceEEEEec-cCCCceeeeccccccCCccEEEecCCCCCCCcccccCcCcCCCCccccCCC--C--Ccccchh
Q 018813          108 GLGAAPPATLAEFTLG-SGGQDFYDVSLVDGYNLPMIVESSGGSGLCSTTGCSTDVNRQCPAELRVGE--G--DACKSAC  182 (350)
Q Consensus       108 g~G~~pPaTLAEFTL~-~~g~DfYDVSLVDGyNlPm~I~P~gG~~~C~~~gC~~dln~~CP~eL~v~~--g--~~C~SaC  182 (350)
                      +.+++||+|||||+|+ .+++|||||||||||||||+|+|++|.+.|+.++|.+|||..||.||||++  +  +||||||
T Consensus        81 g~~g~pPaTLaEftl~~~~~~dfYDVSlVDGfNlPm~i~P~~g~~~C~~~~C~~dln~~CP~eL~v~~~~G~~v~C~saC  160 (222)
T 2ahn_A           81 GNGAIPPATLAEFNIPAGGGQDFYDVSLVDGFNLPMSVTPQGGTGDCKTASCPANVNAVCPSELQKKGSDGSVVACLSAC  160 (222)
T ss_dssp             TCCCCSSCCEEEEEECSTTCEEEEEEECTTCBSSCEEEEEESCBSCCCCEEECSCGGGGCCGGGEEECTTSCEEEECCHH
T ss_pred             CCCCCCCceeeeEEecCCCCCceeeeecccccccceEEEecCCCCCcccCcccCchhhhCCHHHeeecCCCcEecccccc
Confidence            9888999999999994 557899999999999999999999876789999999999999999999963  2  4999999


Q ss_pred             hhcCCccccccCCCCCCCCCCCCcchhHhhhcCCCCcccCCCCCCCceeecC-CceEEEecC
Q 018813          183 EAFGSAEYCCSGAFNTPATCKPSVYSQVFKSACPKSYSYAYDDATSTFTCTG-ADYTVTFCP  243 (350)
Q Consensus       183 ~afg~~~yCC~G~~~~p~tC~ps~YS~~FK~aCP~AYSYayDD~tStfTC~~-~~Y~VtFCP  243 (350)
                      .+|++|||||+|+|++|++|+|+.|+++||++||+||||||||++|||||++ ++|+|||||
T Consensus       161 ~af~~~~yCC~g~~~~p~~C~pt~ys~~FK~~CP~AYsYa~DD~tstftC~~~~~y~itFCP  222 (222)
T 2ahn_A          161 VKFGTPQYCCTPPQNTPETCPPTNYSEIFHNACPDAYSYAYDDKRGTFTCNGGPNYAITFCP  222 (222)
T ss_dssp             HHHCCHHHHCCTTSCSTTTSCCCHHHHHHHHHCTTSBCSTTCTTTTCSEEESCCEEEEEECC
T ss_pred             cccCCCccccCCCCCCCCCCCcchHHHHHhhcCcccccCCCCCCCcCeEcCCCCCEEEEeCc
Confidence            9999999999999999999999999999999999999999999999999986 699999998
>1du5_A Zeamatin; beta sandwich, antifungal protein; 2.50A {Zea mays} SCOP: b.25.1.1 Back     alignment and structure
>1aun_A PR-5D; antifungal protein, pathogenesis-related protein, osmotin, thaumatin-like protein; 1.80A {Nicotiana tabacum} SCOP: b.25.1.1 PDB: 2i0w_A 1pcv_A Back     alignment and structure
>2vhk_A Thaumatin-I; kinetics of crystallization, chirality, temperature, microbatch, plant protein, sweet protein; HET: TLA; 0.94A {Thaumatococcus daniellii} PDB: 2blu_A* 2blr_A* 2wbz_A 3n02_A* 3n03_A* 2vhr_A* 1lr2_A* 1lr3_A* 1lxz_A* 1ly0_A* 1pp3_A 1thi_A 2oqn_A* 1kwn_A* 2vi1_A 2vi2_A* 2vi3_A* 2vi4_A* 2vu6_A 2vu7_A* ... Back     alignment and structure
>1z3q_A Thaumatin-like protein; beta sandwich, antifungal protein; 1.70A {Musa acuminata} Back     alignment and structure
>3g7m_A Xylanase inhibitor TL-XI; beta-sheets, xylan degradation, hydrolase inhibitor; HET: GOL; 2.91A {Triticum aestivum} Back     alignment and structure
>3gd0_A Laminaripentaose-producing beta-1,3-guluase (lphase); glycoside hydrolase, 3- glucnase; 1.62A {Streptomyces matensis} PDB: 3gd9_A* Back     alignment and structure
>4aor_D Trypsin inhibitor 3; hydrolase-inhibitor complex, miniprotein scaffold, knottins, protease inhibitor; HET: GOL MES; 1.70A {Spinacia oleracea} PDB: 4aoq_D* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 350
d1rqwa_207 b.25.1.1 (A:) Thaumatin {Ketemfe (Thaumatococcus d 4e-79
d1du5a_206 b.25.1.1 (A:) Zeamatin {Maize (Zea mays) [TaxId: 4 9e-77
d1auna_208 b.25.1.1 (A:) Pathogenesis-related protein 5d {Com 5e-75
>d1rqwa_ b.25.1.1 (A:) Thaumatin {Ketemfe (Thaumatococcus daniellii) [TaxId: 4621]} Length = 207 Back     information, alignment and structure

class: All beta proteins
fold: Osmotin, thaumatin-like protein
superfamily: Osmotin, thaumatin-like protein
family: Osmotin, thaumatin-like protein
domain: Thaumatin
species: Ketemfe (Thaumatococcus daniellii) [TaxId: 4621]

 Score =  239 bits (610), Expect = 4e-79
 Identities = 89/219 (40%), Positives = 120/219 (54%), Gaps = 13/219 (5%)

Query: 28  ATFTFVNKCDYTIWPGILANAGSPRLDSTGFELPQDSSRSF-VAPTGWSGRFWGRTRCNF 86
           ATF  VN+C YT+W     + G   LD+ G +L    S +  V P    G+ W RT C F
Sbjct: 1   ATFEIVNRCSYTVWAAA--SKGDAALDAGGRQLNSGESWTINVEPGTKGGKIWARTDCYF 58

Query: 87  DGSGSGSCLTGDCGSGQVECNGLGAAPPATLAEFTLGSGGQDFYDVSLVDGYNLPMIVES 146
           D SGSG C TGDCG G + C   G  PP TLAEF+L   G+D+ D+S + G+N+PM    
Sbjct: 59  DDSGSGICKTGDCG-GLLRCKRFGR-PPTTLAEFSLNQYGKDYIDISNIKGFNVPMDFSP 116

Query: 147 SGGSGLCSTTGCSTDVNRQCPAELRVGEGDACKSACEAFGSAEYCCSGAFNTPATCKPSV 206
           +     C    C+ D+  QCPA+L+   G  C  AC  F ++EYCC     T   C P+ 
Sbjct: 117 TTRG--CRGVRCAADIVGQCPAKLKA-PGGGCNDACTVFQTSEYCC-----TTGKCGPTE 168

Query: 207 YSQVFKSACPKSYSYAYDDATSTFTCTGADYTVTFCPSS 245
           YS+ FK  CP ++SY  D  T+      ++Y VTFCP++
Sbjct: 169 YSRFFKRLCPDAFSYVLDKPTTVTCPGSSNYRVTFCPTA 207
>d1du5a_ b.25.1.1 (A:) Zeamatin {Maize (Zea mays) [TaxId: 4577]} Length = 206 Back     information, alignment and structure
>d1auna_ b.25.1.1 (A:) Pathogenesis-related protein 5d {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Length = 208 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query350
d1auna_208 Pathogenesis-related protein 5d {Common tobacco (N 100.0
d1du5a_206 Zeamatin {Maize (Zea mays) [TaxId: 4577]} 100.0
d1rqwa_207 Thaumatin {Ketemfe (Thaumatococcus daniellii) [Tax 100.0
>d1auna_ b.25.1.1 (A:) Pathogenesis-related protein 5d {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Back     information, alignment and structure
class: All beta proteins
fold: Osmotin, thaumatin-like protein
superfamily: Osmotin, thaumatin-like protein
family: Osmotin, thaumatin-like protein
domain: Pathogenesis-related protein 5d
species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=100.00  E-value=1.8e-80  Score=568.23  Aligned_cols=203  Identities=46%  Similarity=1.000  Sum_probs=189.3

Q ss_pred             ceEEEEEeCCCCcccceeecCCCCCCCCCCCcccCCCCeEEEEeCCCC-ceeeeecccccCCCCCCcCccCCccCCcccc
Q 018813           27 SATFTFVNKCDYTIWPGILANAGSPRLDSTGFELPQDSSRSFVAPTGW-SGRFWGRTRCNFDGSGSGSCLTGDCGSGQVE  105 (350)
Q Consensus        27 a~tfTi~N~C~~TVWpgi~~~~G~p~l~~~Gf~L~pG~S~si~vP~~W-sGRiWaRTGCsfd~~G~~~C~TGDCGsG~l~  105 (350)
                      +++|||+|||+|||||+++++       .+||+|+||++++|.+|++| +||||+||||+||++|+++|+||||| |+|+
T Consensus         1 ~~~fti~N~C~~TVWp~~~p~-------~gg~~L~~g~s~~~~~p~~~~~gRiW~RTgC~~d~~G~~~C~TGdCg-g~l~   72 (208)
T d1auna_           1 SGVFEVHNNCPYTVWAAATPV-------GGGRRLERGQSWWFWAPPGTKMARIWGRTNCNFDGAGRGWCQTGDCG-GVLE   72 (208)
T ss_dssp             CCEEEEEECSSSCEEEEEETT-------TEEEEECTTCEEEEECCTTCCSEEEEEEEEEEECTTSBEEEEESCCT-TBSS
T ss_pred             CCEEEEEeCCCCCcccccccC-------CCCcccCCCCceEEECCCCCcccceeecCCCCcCCCCccceeccCcC-CeEe
Confidence            479999999999999999864       35899999999999999998 59999999999999999999999998 8999


Q ss_pred             cCCCCCCCCcceEEEEe-ccCCCceeeeccccccCCccEEEecC-CCCCCCcccccCcCcCCCCccccCCCCCcccchhh
Q 018813          106 CNGLGAAPPATLAEFTL-GSGGQDFYDVSLVDGYNLPMIVESSG-GSGLCSTTGCSTDVNRQCPAELRVGEGDACKSACE  183 (350)
Q Consensus       106 C~g~G~~pPaTLAEFTL-~~~g~DfYDVSLVDGyNlPm~I~P~g-G~~~C~~~gC~~dln~~CP~eL~v~~g~~C~SaC~  183 (350)
                      |++. ++||+||||||| +.+++|||||||||||||||+|+|.+ +.+.|+.++|.+|||..||.||||++  +|||||.
T Consensus        73 C~~~-G~pP~TlaEftl~~~~~~DfYDvSlVDGfNlP~~i~P~~~~~~~C~~~~C~~dln~~CP~~L~v~~--~C~saC~  149 (208)
T d1auna_          73 CKGW-GKPPNTLAEYALNQFSNLDFWDISVIDGFNIPMSFGPTKPGPGKCHGIQCTANINGECPGSLRVPG--GCNNPCT  149 (208)
T ss_dssp             CSSC-CCSSCCEEEEEEEEGGGEEEEEEECTTCBSSCEEEEESSCCSTTCSCEEECSCHHHHCCTTTEETT--EECCHHH
T ss_pred             cCCC-CCCCcceEEEEeccCCCcceeccccccccccceEEeccCCCCCCcCcccccCCccccCCHhhccCC--CCcccee
Confidence            9987 479999999999 45678999999999999999999986 45689999999999999999999986  6999999


Q ss_pred             hcCCccccccCCCCCCCCCCCCcchhHhhhcCCCCcccCCCCCCCceeecC--CceEEEecCCC
Q 018813          184 AFGSAEYCCSGAFNTPATCKPSVYSQVFKSACPKSYSYAYDDATSTFTCTG--ADYTVTFCPSS  245 (350)
Q Consensus       184 afg~~~yCC~G~~~~p~tC~ps~YS~~FK~aCP~AYSYayDD~tStfTC~~--~~Y~VtFCP~~  245 (350)
                      +|++|||||+     +++|+|++|+++||++||+||||||||++|||||++  ++|+|||||.+
T Consensus       150 ~~~~~~~CCt-----~~~C~pt~ys~~FK~~CP~AYsYa~Dd~sstftC~~g~~~Y~VtFCP~g  208 (208)
T d1auna_         150 TFGGQQYCCT-----QGPCGPTELSRWFKQRCPDAYSYPQDDPTSTFTCTSWTTDYKVMFCPYG  208 (208)
T ss_dssp             HTCSHHHHCT-----TSCCCCCHHHHHHHHHCTTSBCSTTCCTTTCEEEETTSCCEEEEESTTC
T ss_pred             ecCCCccccC-----CCcCCCchHHHHHHhhCCcccccCcCCCCcceEcCCCCCCEEEEeCCCC
Confidence            9999999996     478999999999999999999999999999999975  79999999974
>d1du5a_ b.25.1.1 (A:) Zeamatin {Maize (Zea mays) [TaxId: 4577]} Back     information, alignment and structure
>d1rqwa_ b.25.1.1 (A:) Thaumatin {Ketemfe (Thaumatococcus daniellii) [TaxId: 4621]} Back     information, alignment and structure