Citrus Sinensis ID: 018817

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350
MFCVKGLSESGRLTSVPSKYFFEKDLNDDCINSEAETIPIIDFSMLTSGSPEQRYKTIQAIGNACLKWGFFEVINHGVPNTLRDEMIRASESFFDLSDEQKREYAGKKLFDPIRWGTSFNVNVDKTLFWRDYLKIHVHPQFNAPQNPLGFSETIQEYCKRVRELANELLKGIMESLGLEESYIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQNDHVGLHVRHDGKWIPVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAVVNGKATRISVATAHGPPLDTVVGPAQDLLDNENRPPLYRGIKYREYLQLQQSNQLNGKSCLDHVKVNINDTCCK
ccccHHHHHccccccccccccccccccccccccccccccEEEccccccccHHHHHHHHHHHHHHHHHccEEEEEcccccHHHHHHHHHHHHHHccccHHHHHHHHcccccccEEEccccccccccccccEEEEEEEEEccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHccccccccEEEEccccccccccccccccccccccccEEEEccccccEEEEEccEEEEcccccccEEEEEccEEEEEEcccccccccEEEEcccccEEEEEEEEccccccEEEcccccccccccccccccccHHHHHHHHHHccccccccccEEcccccccccc
cccHHHHHcccccccccHHcEccccccccccccccccccEEEccccccccHHHHHHHHHHHHHHHHHccEEEEEcccccHHHHHHHHHHHHHHHcccHHHHHHHEHccccccEEEEEEEEEcccccccHHHHEEEEEccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHccccccccEEEEEEEcccccccccccEEEEcccccEEEEEEcccccEEEEEccEEEEcccccccEEEEEcHHHHHHcccccccccEEEcccccccEEEEEEEEEccccccEcccHHHccccccccccccccHHHHHHHHHHcccccHHHHHHHEccccccccc
mfcvkglsesgrltsvpskyffekdlnddcinseaetipiidfsmltsgspeqRYKTIQAIGNACLKWGFFevinhgvpntlrDEMIRASESFFDLSDEQKREYagkklfdpirwgtsfnvnvdktlfwrDYLKIhvhpqfnapqnplgfsETIQEYCKRVRELANELLKGIMESLGLEESYIQKAMDLETDSHQLLVvnlyppcpqpevvmglpphsdhgLLTILMqndhvglhvrhdgkwipvnpppgsfvvnigdhmeilsngkykSVLHRAVVNGKATRISVatahgppldtvvgpaqdlldnenrpplyrgikYREYLQLQQsnqlngkscldHVKVnindtcck
mfcvkglsesgrltsvpsKYFFEKDLNDDCINSEAETIPIIDFSMLTSGSPEQRYKTIQAIGNACLKWGFFEVINHGVPNTLRDEMIRASESFFDLSDEQKREYAGkklfdpirwgtsfnVNVDKTLFWRDYLKIHVHPQFNAPQNPLGFSETIQEYCKRVRELANELLKGIMESLGLEESYIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQNDHVGLHVRHDGKWIPVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAVVNGKATRISvatahgppldtvvgpaqdlldneNRPPLYRGIKYREYLQLQQSNqlngkscldhvkvnindtcck
MFCVKGLSESGRLTSVPSKYFFEKDLNDDCINSEAETIPIIDFSMLTSGSPEQRYKTIQAIGNACLKWGFFEVINHGVPNTLRDEMIRASESFFDLSDEQKREYAGKKLFDPIRWGTSFNVNVDKTLFWRDYLKIHVHPQFNAPQNPLGFSETIQEYCKRVRELANELLKGIMESLGLEESYIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQNDHVGLHVRHDGKWIPVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAVVNGKATRISVATAHGPPLDTVVGPAQDLLDNENRPPLYRGIKYREYLQLQQSNQLNGKSCLDHVKVNINDTCCK
***************VPSKYFFEKDLNDDCINSEAETIPIIDFSMLTSGSPEQRYKTIQAIGNACLKWGFFEVINHGVPNTLRDEMIRASESFFDLS***KREYAGKKLFDPIRWGTSFNVNVDKTLFWRDYLKIHVHPQFNAPQNPLGFSETIQEYCKRVRELANELLKGIMESLGLEESYIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQNDHVGLHVRHDGKWIPVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAVVNGKATRISVATAHGPPLDTVVGPAQDLLDNENRPPLYRGIKYREYLQLQQSNQLNGKSCLDHVKVNINDTC**
MFCVKGLSESGRLTSVPSKYFF***************IPIIDFSMLTSGSPEQRYKTIQAIGNACLKWGFFEVINHGVPNTLRDEMIRASESFFDLSDEQKR***********RWGTSFNVNVDKTLFWRDYLKIHVHPQFNAPQNPLGFSETIQEYCKRVRELANELLKGIMESLGLEESYIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQNDHVGLHVRHDGKWIPVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAVVNGKATRISVATAHGPPLDTVVGPAQDLLDNENRPPLYRGIKYREYLQLQQSNQLNGKSCLDHVKVN*******
**********GRLTSVPSKYFFEKDLNDDCINSEAETIPIIDFSMLTSGSPEQRYKTIQAIGNACLKWGFFEVINHGVPNTLRDEMIRASESFFDLSDEQKREYAGKKLFDPIRWGTSFNVNVDKTLFWRDYLKIHVHPQFNAPQNPLGFSETIQEYCKRVRELANELLKGIMESLGLEESYIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQNDHVGLHVRHDGKWIPVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAVVNGKATRISVATAHGPPLDTVVGPAQDLLDNENRPPLYRGIKYREYLQLQQSNQLNGKSCLDHVKVNINDTCCK
MFCVKGLSESGRLTSVPSKYFFEKDLNDDCINSEAETIPIIDFSMLTSGSPEQRYKTIQAIGNACLKWGFFEVINHGVPNTLRDEMIRASESFFDLSDEQKREYAGKKLFDPIRWGTSFNVNVDKTLFWRDYLKIHVHPQFNAPQNPLGFSETIQEYCKRVRELANELLKGIMESLGLEESYIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQNDHVGLHVRHDGKWIPVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAVVNGKATRISVATAHGPPLDTVVGPAQDLLDNENRPPLYRGIKYREYLQLQQSNQLNGKSCLDHVKVNIN*****
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MFCVKGLSESGRLTSVPSKYFFEKDLNDDCINSEAETIPIIDFSMLTSGSPEQRYKTIQAIGNACLKWGFFEVINHGVPNTLRDEMIRASESFFDLSDEQKREYAGKKLFDPIRWGTSFNVNVDKTLFWRDYLKIHVHPQFNAPQNPLGFSETIQEYCKRVRELANELLKGIMESLGLEESYIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQNDHVGLHVRHDGKWIPVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAVVNGKATRISVATAHGPPLDTVVGPAQDLLDNENRPPLYRGIKYREYLQLQQSNQLNGKSCLDHVKVNINDTCCK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query350 2.2.26 [Sep-21-2011]
D4N501364 Probable 2-oxoglutarate/F N/A no 0.934 0.898 0.377 4e-59
Q39224358 Protein SRG1 OS=Arabidops no no 0.951 0.930 0.354 4e-54
D4N500364 Thebaine 6-O-demethylase N/A no 0.934 0.898 0.362 5e-54
D4N502360 Codeine O-demethylase OS= N/A no 0.931 0.905 0.362 1e-53
Q9LHN8361 Feruloyl CoA ortho-hydrox no no 0.92 0.891 0.360 4e-52
Q9C899361 Feruloyl CoA ortho-hydrox no no 0.94 0.911 0.367 4e-52
P51091357 Leucoanthocyanidin dioxyg N/A no 0.914 0.896 0.332 6e-49
Q84MB3365 1-aminocyclopropane-1-car no no 0.951 0.912 0.344 1e-47
Q9LTH8364 1-aminocyclopropane-1-car no no 0.951 0.914 0.331 2e-46
Q96323356 Leucoanthocyanidin dioxyg no no 0.84 0.825 0.350 3e-46
>sp|D4N501|DIOX2_PAPSO Probable 2-oxoglutarate/Fe(II)-dependent dioxygenase OS=Papaver somniferum GN=DIOX2 PE=2 SV=1 Back     alignment and function desciption
 Score =  228 bits (582), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 129/342 (37%), Positives = 204/342 (59%), Gaps = 15/342 (4%)

Query: 13  LTSVPSKYF-----FEKDLNDDCINSEAETIPIIDFSMLTSGSPEQRYKTIQAIGNACLK 67
           L  +PS+Y       +  +    I+ + ET+P+ID   L S  P      +  + +AC +
Sbjct: 26  LAEIPSRYICTVENLQLPVGASVID-DHETVPVIDIENLISSEPVTEKLELDRLHSACKE 84

Query: 68  WGFFEVINHGVPNTLRDEMIRASESFFDLSDEQKREYAGKKLFDPIRWGTSFNVNVDKTL 127
           WGFF+V+NHGV  +L D +    + FF+LS  +K +Y G+K  D   +G +F  + D+TL
Sbjct: 85  WGFFQVVNHGVDTSLVDNVKSDIQGFFNLSMNEKIKY-GQKDGDVEGFGQAFVASEDQTL 143

Query: 128 FWRDY-----LKIHVHPQFNAPQNPLGFSETIQEYCKRVRELANELLKGIMESLGLEESY 182
            W D      L +H+       + PL   ETI+ Y   +++L+  L + + ++L ++   
Sbjct: 144 DWADIFMILTLPLHLRKPHLFSKLPLPLRETIESYSSEMKKLSMVLFEKMEKALQVQAVE 203

Query: 183 IQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQNDHV-GLHVRHDGK 241
           I++  ++  D  Q++ +N YPPCPQPE+ +GL PHSD G LTIL+Q + V GL ++++G+
Sbjct: 204 IKEISEVFKDMTQVMRMNYYPPCPQPELAIGLTPHSDFGGLTILLQLNEVEGLQIKNEGR 263

Query: 242 WIPVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAVVNGKATRISVATAHGPPLDTVVGPA 301
           WI V P P +FVVN+GD +EI++NG Y+SV HRAVVN    R+S+AT H P L++ +GP 
Sbjct: 264 WISVKPLPNAFVVNVGDVLEIMTNGMYRSVDHRAVVNSTKERLSIATFHDPNLESEIGPI 323

Query: 302 QDLLDNENRPPLYR-GIKYREYLQLQQSNQLNGKSCLDHVKV 342
             L+   N P L+R G  Y E ++   S +L+GKS LD +++
Sbjct: 324 SSLI-TPNTPALFRSGSTYGELVEEFHSRKLDGKSFLDSMRM 364
Non-heme dioxygenase active on an unknown substrate. No activity with (S)-reticuline, salutaridine, papaverine, (S)-corytuberine, oripavine, (S)-scoulerine, pavine, noscapine, codeine or thebaine.
Papaver somniferum (taxid: 3469)
EC: 1EC: .EC: 1EC: 4EC: .EC: 1EC: 1EC: .EC: -
>sp|Q39224|SRG1_ARATH Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 SV=1 Back     alignment and function description
>sp|D4N500|DIOX1_PAPSO Thebaine 6-O-demethylase OS=Papaver somniferum GN=T6ODM PE=1 SV=1 Back     alignment and function description
>sp|D4N502|DIOX3_PAPSO Codeine O-demethylase OS=Papaver somniferum GN=CODM PE=1 SV=1 Back     alignment and function description
>sp|Q9LHN8|F6H1_ARATH Feruloyl CoA ortho-hydroxylase 1 OS=Arabidopsis thaliana GN=F6'H1 PE=1 SV=1 Back     alignment and function description
>sp|Q9C899|F6H2_ARATH Feruloyl CoA ortho-hydroxylase 2 OS=Arabidopsis thaliana GN=F6'H2 PE=1 SV=1 Back     alignment and function description
>sp|P51091|LDOX_MALDO Leucoanthocyanidin dioxygenase OS=Malus domestica GN=ANS PE=2 SV=1 Back     alignment and function description
>sp|Q84MB3|ACCH1_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 1 OS=Arabidopsis thaliana GN=At1g06620 PE=2 SV=1 Back     alignment and function description
>sp|Q9LTH8|ACH11_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 11 OS=Arabidopsis thaliana GN=At5g59530 PE=2 SV=1 Back     alignment and function description
>sp|Q96323|LDOX_ARATH Leucoanthocyanidin dioxygenase OS=Arabidopsis thaliana GN=LDOX PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query350
255545854336 Flavonol synthase/flavanone 3-hydroxylas 0.96 1.0 0.640 1e-129
225459191344 PREDICTED: thebaine 6-O-demethylase [Vit 0.954 0.970 0.604 1e-125
302142011336 unnamed protein product [Vitis vinifera] 0.954 0.994 0.604 1e-125
356552935340 PREDICTED: probable 2-oxoglutarate/Fe(II 0.971 1.0 0.628 1e-125
356552933340 PREDICTED: probable 2-oxoglutarate/Fe(II 0.971 1.0 0.619 1e-122
356500734340 PREDICTED: probable 2-oxoglutarate/Fe(II 0.971 1.0 0.616 1e-122
357489819342 Gibberellin 3-beta-dioxygenase [Medicago 0.971 0.994 0.610 1e-121
296087451 559 unnamed protein product [Vitis vinifera] 0.98 0.613 0.577 1e-114
255563200364 Leucoanthocyanidin dioxygenase, putative 0.965 0.928 0.578 1e-114
225465757353 PREDICTED: probable 2-oxoglutarate/Fe(II 0.957 0.949 0.588 1e-114
>gi|255545854|ref|XP_002513987.1| Flavonol synthase/flavanone 3-hydroxylase, putative [Ricinus communis] gi|223547073|gb|EEF48570.1| Flavonol synthase/flavanone 3-hydroxylase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  466 bits (1198), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 219/342 (64%), Positives = 277/342 (80%), Gaps = 6/342 (1%)

Query: 1   MFCVKGLSESGRLTSVPSKYFFEKDLNDDCINSEAETIPIIDFSMLTSGSPEQRYKTIQA 60
           MF VKGL +SG L +VPSKY +++  +D+CI+ + ETIPIIDFS+LTSG+PE+  K IQ 
Sbjct: 1   MFSVKGLLDSGCLDNVPSKYAYKRK-SDECISFDEETIPIIDFSLLTSGTPEEHSKVIQD 59

Query: 61  IGNACLKWGFFEVINHGVPNTLRDEMIRASESFFDLSDEQKREYAGKKLFDPIRWGTSFN 120
           IGNAC +WGFF VINHGVP  +RDEMI + ESFF+L++E+K+EYAGK+  DPIR+GTSFN
Sbjct: 60  IGNACQEWGFFMVINHGVPKKVRDEMIESIESFFNLTEEEKQEYAGKEPIDPIRYGTSFN 119

Query: 121 VNVDKTLFWRDYLKIHVHPQFNAPQNPLGFSETIQEYCKRVRELANELLKGIMESLGLEE 180
           V  DK L WRDYLKI VHP F +P+NP GFS+ ++EYC++ RE+ANELLKGI +SLGLEE
Sbjct: 120 VTEDKALLWRDYLKILVHPHFVSPRNPAGFSKVLEEYCRKTREVANELLKGISKSLGLEE 179

Query: 181 SYIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQNDHVGLHVRHDG 240
           +YI K  ++E  S Q+LV NLYPPCPQP++ MGLPPHSD+GL+T+L+QN   GL V H G
Sbjct: 180 NYIIKKTNVEMGS-QMLVANLYPPCPQPDIAMGLPPHSDYGLITLLIQNGLQGLQVMHHG 238

Query: 241 KWIPVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAVVNGKATRISVATAHGPPLDTVVGP 300
           KW+P+ P   SF+VNIGDHMEIL+ GKYKSV+HRAVVN KATRIS+ TAHGPPL+TV+ P
Sbjct: 239 KWVPITPLLDSFIVNIGDHMEILTKGKYKSVVHRAVVNSKATRISIGTAHGPPLETVISP 298

Query: 301 AQDLLDNENRPPLYRGIKYREYLQLQQSNQLNGKSCLDHVKV 342
           A++L    + PP +  IK+REYL+LQQS QL GKSCLD +++
Sbjct: 299 AEEL----SNPPAHLAIKFREYLELQQSRQLQGKSCLDSIRI 336

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225459191|ref|XP_002285730.1| PREDICTED: thebaine 6-O-demethylase [Vitis vinifera] Back     alignment and taxonomy information
>gi|302142011|emb|CBI19214.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356552935|ref|XP_003544817.1| PREDICTED: probable 2-oxoglutarate/Fe(II)-dependent dioxygenase-like [Glycine max] Back     alignment and taxonomy information
>gi|356552933|ref|XP_003544816.1| PREDICTED: probable 2-oxoglutarate/Fe(II)-dependent dioxygenase-like [Glycine max] Back     alignment and taxonomy information
>gi|356500734|ref|XP_003519186.1| PREDICTED: probable 2-oxoglutarate/Fe(II)-dependent dioxygenase-like [Glycine max] Back     alignment and taxonomy information
>gi|357489819|ref|XP_003615197.1| Gibberellin 3-beta-dioxygenase [Medicago truncatula] gi|355516532|gb|AES98155.1| Gibberellin 3-beta-dioxygenase [Medicago truncatula] Back     alignment and taxonomy information
>gi|296087451|emb|CBI34040.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|255563200|ref|XP_002522603.1| Leucoanthocyanidin dioxygenase, putative [Ricinus communis] gi|223538079|gb|EEF39690.1| Leucoanthocyanidin dioxygenase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|225465757|ref|XP_002265816.1| PREDICTED: probable 2-oxoglutarate/Fe(II)-dependent dioxygenase [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query350
TAIR|locus:2040575366 AT2G36690 [Arabidopsis thalian 0.951 0.909 0.404 1.5e-65
TAIR|locus:2127686348 AT4G10490 [Arabidopsis thalian 0.911 0.916 0.402 1.7e-59
TAIR|locus:2127691349 AT4G10500 [Arabidopsis thalian 0.94 0.942 0.381 1.5e-58
TAIR|locus:2153924341 DMR6 "DOWNY MILDEW RESISTANT 6 0.934 0.958 0.394 1.9e-58
TAIR|locus:2042356357 AT2G44800 [Arabidopsis thalian 0.934 0.915 0.358 1.2e-56
TAIR|locus:2081962357 AT3G60290 [Arabidopsis thalian 0.934 0.915 0.355 3.3e-56
TAIR|locus:2089428364 LBO1 "LATERAL BRANCHING OXIDOR 0.857 0.824 0.380 7.8e-55
TAIR|locus:2020407358 SRG1 "senescence-related gene 0.948 0.927 0.355 2.4e-53
TAIR|locus:2086789361 AT3G13610 [Arabidopsis thalian 0.937 0.908 0.372 1e-52
TAIR|locus:2035671361 AT1G55290 [Arabidopsis thalian 0.937 0.908 0.374 3.5e-52
TAIR|locus:2040575 AT2G36690 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 667 (239.9 bits), Expect = 1.5e-65, P = 1.5e-65
 Identities = 142/351 (40%), Positives = 213/351 (60%)

Query:     4 VKGLSESGRLTSVPSKYFF-EKDL-----NDDCINSEAET-IPIIDFSMLTSGSPEQRYK 56
             VK L E+G LT VP+KY + E D      +D  I       +P+IDF+ L    P + + 
Sbjct:    21 VKHLCENG-LTKVPTKYIWPEPDRPILTKSDKLIKPNKNLKLPLIDFAELLG--PNRPH- 76

Query:    57 TIQAIGNACLKWGFFEVINHGVPNTLRDEMIRASESFFDLSDEQKREYAGKKLFDPIRWG 116
              ++ I  AC  +GFF+V+NHG+   +   MI   + FF+L  E++ +Y    +  P+R+G
Sbjct:    77 VLRTIAEACKTYGFFQVVNHGMEGDVSKNMIDVCKRFFELPYEERSKYMSSDMSAPVRYG 136

Query:   117 TSFNVNVDKTLFWRDYLKIHVHP--QF--NAPQNPLGFSETIQEYCKRVRELANELLKGI 172
             TSFN   D    WRD+LK++ HP   +  + P +P  F  +   Y K  +E+   ++K I
Sbjct:   137 TSFNQIKDNVFCWRDFLKLYAHPLPDYLPHWPSSPSDFRSSAATYAKETKEMFEMMVKAI 196

Query:   173 MESLGLEESYIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQNDHV 232
             +ESL ++ S  + A +LE  S Q++VVN YPPCP+PE+ +G+PPHSD+G LT+L+Q++  
Sbjct:   197 LESLEIDGSD-EAAKELEEGS-QVVVVNCYPPCPEPELTLGMPPHSDYGFLTLLLQDEVE 254

Query:   233 GLHVRHDGKWIPVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAVVNGKATRISVATAHGP 292
             GL + +  +W+ V+P PGSFVVN+GDH+EI SNG+YKSVLHR +VN    RISVA+ H  
Sbjct:   255 GLQILYRDEWVTVDPIPGSFVVNVGDHLEIFSNGRYKSVLHRVLVNSTKPRISVASLHSF 314

Query:   293 PLDTVVGPAQDLLDNENRPPLYRGIKYREYLQLQQSNQLNGKSCLDHVKVN 343
             PL +VV P+  L+D  N P  Y    +  +LQ   S +   K+ L+  K++
Sbjct:   315 PLTSVVKPSPKLVDKHN-PSQYMDTDFTTFLQYITSREPKWKNFLESRKIH 364
GO:0005737 "cytoplasm" evidence=ISM
GO:0009058 "biosynthetic process" evidence=ISS
GO:0016491 "oxidoreductase activity" evidence=IEA
GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA;ISS
GO:0055114 "oxidation-reduction process" evidence=IEA
TAIR|locus:2127686 AT4G10490 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2127691 AT4G10500 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2153924 DMR6 "DOWNY MILDEW RESISTANT 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2042356 AT2G44800 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2081962 AT3G60290 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2089428 LBO1 "LATERAL BRANCHING OXIDOREDUCTASE 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2020407 SRG1 "senescence-related gene 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2086789 AT3G13610 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2035671 AT1G55290 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.14.110.766

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00015164001
SubName- Full=Chromosome chr18 scaffold_1, whole genome shotgun sequence; (344 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query350
PLN02947374 PLN02947, PLN02947, oxidoreductase 1e-104
PLN02639337 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxy 5e-96
PLN03178360 PLN03178, PLN03178, leucoanthocyanidin dioxygenase 5e-87
PLN02393362 PLN02393, PLN02393, leucoanthocyanidin dioxygenase 9e-86
PLN02758361 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxy 1e-83
PLN02912348 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxy 6e-83
PLN02904357 PLN02904, PLN02904, oxidoreductase 2e-77
PLN02254358 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase 2e-69
PLN02216357 PLN02216, PLN02216, protein SRG1 3e-68
PLN02704335 PLN02704, PLN02704, flavonol synthase 4e-62
PLN02276361 PLN02276, PLN02276, gibberellin 20-oxidase 2e-59
PLN02299321 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxyl 1e-55
PLN00417348 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxy 5e-55
PLN02403303 PLN02403, PLN02403, aminocyclopropanecarboxylate o 5e-53
PLN02750345 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxy 6e-53
COG3491322 COG3491, PcbC, Isopenicillin N synthase and relate 1e-51
PLN02515358 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-di 3e-50
PLN03001262 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxy 3e-47
PLN02997325 PLN02997, PLN02997, flavonol synthase 8e-44
PLN02485329 PLN02485, PLN02485, oxidoreductase 3e-38
PLN02156335 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase 3e-36
PLN02984341 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxy 2e-35
PTZ00273320 PTZ00273, PTZ00273, oxidase reductase; Provisional 2e-34
PLN02365300 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxy 1e-33
pfam0317196 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase supe 4e-32
pfam14226113 pfam14226, DIOX_N, non-haem dioxygenase in morphin 4e-28
PLN03002332 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxy 4e-17
PLN03176120 PLN03176, PLN03176, flavanone-3-hydroxylase; Provi 7e-08
>gnl|CDD|215510 PLN02947, PLN02947, oxidoreductase Back     alignment and domain information 
 Score =  310 bits (797), Expect = e-104
 Identities = 138/350 (39%), Positives = 204/350 (58%), Gaps = 15/350 (4%)

Query: 4   VKGLSESGRLTSVPSKYFF---EKDLNDDCINSEAET---IPIIDFSMLTSGSPEQRYKT 57
           VK L +SG +T VP+KY     ++          A     +P+ID + L  GS   R   
Sbjct: 28  VKHLCDSG-ITKVPAKYILPASDRPGLTRDEAIAASGNLKLPVIDLAEL-RGS--NRPHV 83

Query: 58  IQAIGNACLKWGFFEVINHGVPNTLRDEMIRASESFFDLSDEQKREYAGKKLFDPIRWGT 117
           +  +  AC ++GFF+V+NHGVP+ +   MI  +  FF+L  E++ +Y    +  P+R+GT
Sbjct: 84  LATLAAACREYGFFQVVNHGVPSEVIGGMIDVARRFFELPLEERAKYMSADMRAPVRYGT 143

Query: 118 SFNVNVDKTLFWRDYLKIHVHPQFNA----PQNPLGFSETIQEYCKRVRELANELLKGIM 173
           SFN N D    WRD+LK+  HP  +     P +P    +    Y K  + L  EL++ I+
Sbjct: 144 SFNQNKDAVFCWRDFLKLVCHPLSDVLPHWPSSPADLRKVAATYAKATKRLFLELMEAIL 203

Query: 174 ESLGLEESYIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQNDHVG 233
           ESLG+ +    + ++      Q++VVN YP CP+PE+ +G+PPHSD+G LT+L+Q++  G
Sbjct: 204 ESLGIVKRGSDELLEEFEAGSQMMVVNCYPACPEPELTLGMPPHSDYGFLTLLLQDEVEG 263

Query: 234 LHVRHDGKWIPVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAVVNGKATRISVATAHGPP 293
           L + H G+W+ V P PGSFVVN+GDH+EI SNG+YKSVLHR  VN    RISVA+ H  P
Sbjct: 264 LQIMHAGRWVTVEPIPGSFVVNVGDHLEIFSNGRYKSVLHRVRVNSTKPRISVASLHSLP 323

Query: 294 LDTVVGPAQDLLDNENRPPLYRGIKYREYLQLQQSNQLNGKSCLDHVKVN 343
            + VVGPA +L+D +N P  Y    +  +L    S +   K+ L+  K+ 
Sbjct: 324 FERVVGPAPELVDEQN-PRRYMDTDFATFLAYLASAEGKHKNFLESRKLI 372

Length = 374
>gnl|CDD|178245 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215614 PLN03178, PLN03178, leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>gnl|CDD|215220 PLN02393, PLN02393, leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>gnl|CDD|215404 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178500 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178492 PLN02904, PLN02904, oxidoreductase Back     alignment and domain information
>gnl|CDD|215142 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|215129 PLN02216, PLN02216, protein SRG1 Back     alignment and domain information
>gnl|CDD|166345 PLN02704, PLN02704, flavonol synthase Back     alignment and domain information
>gnl|CDD|215156 PLN02276, PLN02276, gibberellin 20-oxidase Back     alignment and domain information
>gnl|CDD|215168 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>gnl|CDD|177810 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178025 PLN02403, PLN02403, aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>gnl|CDD|178351 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|226022 COG3491, PcbC, Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>gnl|CDD|178130 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>gnl|CDD|166642 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178576 PLN02997, PLN02997, flavonol synthase Back     alignment and domain information
>gnl|CDD|215267 PLN02485, PLN02485, oxidoreductase Back     alignment and domain information
>gnl|CDD|177816 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|215534 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|140299 PTZ00273, PTZ00273, oxidase reductase; Provisional Back     alignment and domain information
>gnl|CDD|177993 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>gnl|CDD|217403 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase superfamily Back     alignment and domain information
>gnl|CDD|222608 pfam14226, DIOX_N, non-haem dioxygenase in morphine synthesis N-terminal Back     alignment and domain information
>gnl|CDD|178579 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178720 PLN03176, PLN03176, flavanone-3-hydroxylase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 350
PLN02758361 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02216357 protein SRG1 100.0
PLN02947374 oxidoreductase 100.0
PLN02904357 oxidoreductase 100.0
PLN02393362 leucoanthocyanidin dioxygenase like protein 100.0
PLN03178360 leucoanthocyanidin dioxygenase; Provisional 100.0
PLN02912348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02276361 gibberellin 20-oxidase 100.0
PLN02639337 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02254358 gibberellin 3-beta-dioxygenase 100.0
PLN00417348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02704335 flavonol synthase 100.0
PLN02515358 naringenin,2-oxoglutarate 3-dioxygenase 100.0
PLN02750345 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PTZ00273320 oxidase reductase; Provisional 100.0
PLN02299321 1-aminocyclopropane-1-carboxylate oxidase 100.0
PLN02485329 oxidoreductase 100.0
PLN02997325 flavonol synthase 100.0
KOG0143322 consensus Iron/ascorbate family oxidoreductases [S 100.0
COG3491322 PcbC Isopenicillin N synthase and related dioxygen 100.0
PLN03002332 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02156335 gibberellin 2-beta-dioxygenase 100.0
PLN02403303 aminocyclopropanecarboxylate oxidase 100.0
PLN02365300 2-oxoglutarate-dependent dioxygenase 100.0
PLN02984341 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN03001262 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PF0317198 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Ent 99.91
PLN03176120 flavanone-3-hydroxylase; Provisional 99.87
PF14226116 DIOX_N: non-haem dioxygenase in morphine synthesis 99.87
PF13640100 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; 96.43
PRK05467226 Fe(II)-dependent oxygenase superfamily protein; Pr 94.73
smart00702178 P4Hc Prolyl 4-hydroxylase alpha subunit homologues 94.4
PF12851171 Tet_JBP: Oxygenase domain of the 2OGFeDO superfami 92.14
>PLN02758 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information 
Probab=100.00  E-value=3.7e-81  Score=595.02  Aligned_cols=337  Identities=37%  Similarity=0.661  Sum_probs=302.3

Q ss_pred             CcchhhhhhcCCCCCCCCCCCCCCCCCCCCC---CCCCCCCceeecCCCCCCChhHHHHHHHHHHHHHHhcceEEEEeCC
Q 018817            1 MFCVKGLSESGRLTSVPSKYFFEKDLNDDCI---NSEAETIPIIDFSMLTSGSPEQRYKTIQAIGNACLKWGFFEVINHG   77 (350)
Q Consensus         1 ~~~~~~~~~~~~~~~~p~~y~~~~~~~~~~~---~~~~~~lPvIDl~~l~~~d~~~r~~~~~~l~~A~~~~GfF~l~nhG   77 (350)
                      |.+|+.|+++| +++||++|++|++++|...   .....+||||||+.+.+++..++.+++++|.+||++||||||+|||
T Consensus        14 ~~~~~~l~~~~-~~~vp~~~v~~~~~~p~~~~~~~~~~~~IPvIDl~~l~~~~~~~~~~~~~~l~~Ac~~~GFF~v~nHG   92 (361)
T PLN02758         14 IDDVQELRKSK-PTTVPERFIRDMDERPDLASDTLHAPDDIPVIDFSRLVKGDNDELFSEILKLRLACEEWGFFQVINHG   92 (361)
T ss_pred             cccHHHHHhcC-CCCCCHHHcCCchhccccccccccCCCCCCeEEchhhcCCChHHHHHHHHHHHHHHHhCeEEEEecCC
Confidence            45799999998 9999999999998887542   1135689999999998767667778899999999999999999999


Q ss_pred             CChHHHHHHHHHHHHHhcCCHHHHhhHhcCCCCCceecccccccCCCcccchhhcccccccC-----CCCCCCCCcchHH
Q 018817           78 VPNTLRDEMIRASESFFDLSDEQKREYAGKKLFDPIRWGTSFNVNVDKTLFWRDYLKIHVHP-----QFNAPQNPLGFSE  152 (350)
Q Consensus        78 i~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~~~~Gy~~~~~~~~~~~~d~~e~~~~~~~p-----~~~wP~~~~~fr~  152 (350)
                      |+.++++++++.+++||+||.|+|+++... +...+||+...........+|+|.|.++..+     .+.||+.++.||+
T Consensus        93 i~~~l~~~~~~~~~~FF~LP~eeK~k~~~~-~~~~~GY~~~~~~~~~~~~d~~e~~~~~~~p~~~~~~~~WP~~~~~fr~  171 (361)
T PLN02758         93 IELELLEEIEKVAREFFMLPLEEKQKYPMA-PGTVQGYGQAFVFSEDQKLDWCNMFALGVEPHFIRNPKLWPTKPARFSE  171 (361)
T ss_pred             CCHHHHHHHHHHHHHHhcCCHHHHHHhccc-CCCccccCcccccccccccCeeEEEEeeccCccccccccCccccHHHHH
Confidence            999999999999999999999999998643 3356799765433345567999998876544     3559998899999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHhhcccCCcccceeccccCCCCCCCccccCCCcccCCceeEEeeCC--
Q 018817          153 TIQEYCKRVRELANELLKGIMESLGLEESYIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQND--  230 (350)
Q Consensus       153 ~~~~y~~~~~~la~~ll~~l~~~Lgl~~~~~~~~~~~~~~~~~~lrl~~Yp~~~~~~~~~~~~~HtD~~~lTll~q~~--  230 (350)
                      .+++|+++|.+++..||++|+++||+++++|.+.+  . ...+.||++|||+|+.++..+|+++|||+|+||||+|+.  
T Consensus       172 ~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~--~-~~~~~lR~~~YP~~~~~~~~~g~~~HtD~g~lTlL~qd~~~  248 (361)
T PLN02758        172 TLEVYSREIRELCQRLLKYIAMTLGLKEDRFEEMF--G-EAVQAVRMNYYPPCSRPDLVLGLSPHSDGSALTVLQQGKGS  248 (361)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHcCCChhhhHHHh--c-CccceeeeecCCCCCCcccccCccCccCCceeEEEEeCCCC
Confidence            99999999999999999999999999999999988  6 667889999999999888899999999999999999974  


Q ss_pred             CCCcccccCCceEecCCCCCcEEEEecchhHHhhCCccccccceeecCCCCceeEEEEeeCCCCCceeecCccccCCCCC
Q 018817          231 HVGLHVRHDGKWIPVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAVVNGKATRISVATAHGPPLDTVVGPAQDLLDNENR  310 (350)
Q Consensus       231 ~~GLqv~~~g~W~~V~~~~g~~iVn~Gd~l~~~TnG~~~a~~HRVv~~~~~~R~Si~~F~~p~~d~~i~pl~~~~~~~~~  310 (350)
                      ++||||+++|+|++|+|.||++|||+||+||+||||+|||++|||+.+..++|||++||++|+.|++|.|+++++++ ++
T Consensus       249 v~GLQV~~~g~Wi~V~p~pgalVVNiGD~L~~~SNG~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~~i~pl~elv~~-~~  327 (361)
T PLN02758        249 CVGLQILKDNTWVPVHPVPNALVINIGDTLEVLTNGKYKSVEHRAVTNKEKDRLSIVTFYAPSYEVELGPMPELVDD-EN  327 (361)
T ss_pred             CCCeeeeeCCEEEeCCCCCCeEEEEccchhhhhcCCeeecccceeecCCCCCEEEEEEEecCCCCCeEeCCHHHcCC-CC
Confidence            89999999999999999999999999999999999999999999999878899999999999999999999999998 88


Q ss_pred             CCCCCCcCHHHHHHHHHHccCCCCccccccccc
Q 018817          311 PPLYRGIKYREYLQLQQSNQLNGKSCLDHVKVN  343 (350)
Q Consensus       311 ~~~y~~~~~~e~~~~~~~~~~~~~~~l~~~~i~  343 (350)
                      |++|++++++||+..++++...++..++.+||.
T Consensus       328 p~~Y~~~~~~ey~~~~~~~~~~~~~~~~~~~~~  360 (361)
T PLN02758        328 PCKYRRYNHGEYSRHYVTSKLQGKKTLEFAKIL  360 (361)
T ss_pred             CCcCCCccHHHHHHHHHhcccCchhhhhhhccC
Confidence            999999999999999999888888888888763

>PLN02216 protein SRG1 Back     alignment and domain information
>PLN02947 oxidoreductase Back     alignment and domain information
>PLN02904 oxidoreductase Back     alignment and domain information
>PLN02393 leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>PLN03178 leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>PLN02912 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02276 gibberellin 20-oxidase Back     alignment and domain information
>PLN02639 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02254 gibberellin 3-beta-dioxygenase Back     alignment and domain information
>PLN00417 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02704 flavonol synthase Back     alignment and domain information
>PLN02515 naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>PLN02750 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PTZ00273 oxidase reductase; Provisional Back     alignment and domain information
>PLN02299 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>PLN02485 oxidoreductase Back     alignment and domain information
>PLN02997 flavonol synthase Back     alignment and domain information
>KOG0143 consensus Iron/ascorbate family oxidoreductases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] Back     alignment and domain information
>COG3491 PcbC Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>PLN03002 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02156 gibberellin 2-beta-dioxygenase Back     alignment and domain information
>PLN02403 aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>PLN02365 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>PLN02984 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN03001 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PF03171 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Entry for Lysyl hydrolases This Prosite entry is a sub-family of the Pfam entry; InterPro: IPR005123 This domain is found in members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily [], as well as the C-terminal of prolyl 4-hydroxylase alpha subunit Back     alignment and domain information
>PLN03176 flavanone-3-hydroxylase; Provisional Back     alignment and domain information
>PF14226 DIOX_N: non-haem dioxygenase in morphine synthesis N-terminal; PDB: 3OOX_A 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A Back     alignment and domain information
>PF13640 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; PDB: 3DKQ_B 3GZE_D 3HQR_A 2Y34_A 2G1M_A 2G19_A 3OUI_A 3OUJ_A 2HBU_A 2Y33_A Back     alignment and domain information
>PRK05467 Fe(II)-dependent oxygenase superfamily protein; Provisional Back     alignment and domain information
>smart00702 P4Hc Prolyl 4-hydroxylase alpha subunit homologues Back     alignment and domain information
>PF12851 Tet_JBP: Oxygenase domain of the 2OGFeDO superfamily ; InterPro: IPR024779 TETs are 2OG- and Fe(II)-dependent oxygenases that catalyse the conversion of 5 methyl-Cytosine (5-MC) to 5-hydroxymethyl-cytosine (hmC) in cultured cells and in vitro [] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query350
1gp5_A356 Anthocyanidin Synthase From Arabidopsis Thaliana Co 2e-47
2brt_A355 Anthocyanidin Synthase From Arabidopsis Thaliana Co 2e-47
1gp4_A356 Anthocyanidin Synthase From Arabidopsis Thaliana (S 8e-47
1w9y_A319 The Structure Of Acc Oxidase Length = 319 6e-41
3oox_A312 Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenas 7e-18
1ips_A331 Isopenicillin N Synthase From Aspergillus Nidulans 1e-11
2bjs_A325 Isopenicillin N Synthase C-Terminal Truncation Muta 1e-11
3on7_A280 Crystal Structure Of A Putative Oxygenase (So_2589) 4e-08
>pdb|1GP5|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Trans-Dihydroquercetin Length = 356 Back     alignment and structure 
Iteration: 1

 Score =  186 bits (472), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 108/308 (35%), Positives = 165/308 (53%), Gaps = 14/308 (4%)
Query: 4   VKGLSESGRLTSVPSKYFFEKD----LNDDCINSEAE---TIPIIDFSMLTSGSPEQRYK 56
           V+ L++SG + S+P +Y   K+    +ND  +  + E    +P ID   + S   + R  
Sbjct: 7   VESLAKSG-IISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIREN 65
Query: 57  TIQAIGNACLKWGFFEVINHGVPNTLRDEMIRASESFFDLSDEQKREYAGKKLFDPIR-W 115
            I+ +  A L WG   +INHG+P  L + + +A E FF LS E+K +YA  +    I+ +
Sbjct: 66  CIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGY 125
Query: 116 GTSFNVNVDKTLFWRDYLKIHVHPQFNA-----PQNPLGFSETIQEYCKRVRELANELLK 170
           G+    N    L W DY     +P+        P+ P  + E   EY K +R LA ++ K
Sbjct: 126 GSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFK 185
Query: 171 GIMESLGLEESYIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQND 230
            +   LGLE   ++K +    +    + +N YP CPQPE+ +G+  H+D   LT ++ N 
Sbjct: 186 ALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHNM 245
Query: 231 HVGLHVRHDGKWIPVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAVVNGKATRISVATAH 290
             GL + ++GKW+     P S V++IGD +EILSNGKYKS+LHR +VN +  RIS A   
Sbjct: 246 VPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFC 305
Query: 291 GPPLDTVV 298
            PP D +V
Sbjct: 306 EPPKDKIV 313
>pdb|2BRT|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Naringenin Length = 355 Back     alignment and structure
>pdb|1GP4|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana (Selenomethionine Substituted) Length = 356 Back     alignment and structure
>pdb|1W9Y|A Chain A, The Structure Of Acc Oxidase Length = 319 Back     alignment and structure
>pdb|3OOX|A Chain A, Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenase Family Protein (Cc_0200) From Caulobacter Crescentus At 1.44 A Resolution Length = 312 Back     alignment and structure
>pdb|1IPS|A Chain A, Isopenicillin N Synthase From Aspergillus Nidulans (Manganese Complex) Length = 331 Back     alignment and structure
>pdb|2BJS|A Chain A, Isopenicillin N Synthase C-Terminal Truncation Mutant Length = 325 Back     alignment and structure
>pdb|3ON7|A Chain A, Crystal Structure Of A Putative Oxygenase (So_2589) From Shewanella Oneidensis At 2.20 A Resolution Length = 280 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query350
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 1e-151
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 1e-140
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 1e-100
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 1e-85
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 1e-76
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 3e-76
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-07
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Length = 356 Back     alignment and structure
 Score =  428 bits (1102), Expect = e-151
 Identities = 112/353 (31%), Positives = 181/353 (51%), Gaps = 20/353 (5%)

Query: 4   VKGLSESGRLTSVPSKYFF-------EKDLNDDCINSEAETIPIIDFSMLTSGSPEQRYK 56
           V+ L++SG + S+P +Y           D+  +    +   +P ID   + S   + R  
Sbjct: 7   VESLAKSG-IISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIREN 65

Query: 57  TIQAIGNACLKWGFFEVINHGVPNTLRDEMIRASESFFDLSDEQKREYAGKKLFDPIR-W 115
            I+ +  A L WG   +INHG+P  L + + +A E FF LS E+K +YA  +    I+ +
Sbjct: 66  CIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGY 125

Query: 116 GTSFNVNVDKTLFWRDYLKIHVHPQFNA-----PQNPLGFSETIQEYCKRVRELANELLK 170
           G+    N    L W DY     +P+        P+ P  + E   EY K +R LA ++ K
Sbjct: 126 GSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFK 185

Query: 171 GIMESLGLEESYIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQND 230
            +   LGLE   ++K +    +    + +N YP CPQPE+ +G+  H+D   LT ++ N 
Sbjct: 186 ALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHNM 245

Query: 231 HVGLHVRHDGKWIPVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAVVNGKATRISVATAH 290
             GL + ++GKW+     P S V++IGD +EILSNGKYKS+LHR +VN +  RIS A   
Sbjct: 246 VPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFC 305

Query: 291 GPPLDTVV-GPAQDLLDNENRPPLYRGIKYREYLQLQQSNQLNGKSCLDHVKV 342
            PP D +V  P  +++  E+ P  +    + ++++    ++L GK   + V  
Sbjct: 306 EPPKDKIVLKPLPEMVSVES-PAKFPPRTFAQHIE----HKLFGKEQEELVSE 353
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Length = 319 Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Length = 331 Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Length = 311 Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Length = 280 Back     alignment and structure
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Length = 312 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query350
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 100.0
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 100.0
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 100.0
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 100.0
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 100.0
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 100.0
3dkq_A243 PKHD-type hydroxylase SBAL_3634; putative oxygenas 94.58
2hbt_A247 EGL nine homolog 1; prolyl hydroxylase, hypoxia in 94.48
2rg4_A216 Uncharacterized protein; rhodobacterales, oceanico 92.59
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Back     alignment and structure
Probab=100.00  E-value=2.9e-81  Score=595.83  Aligned_cols=328  Identities=32%  Similarity=0.570  Sum_probs=295.4

Q ss_pred             cchhhhhhcCCCCCCCCCCCCCCCCCCCCCC---C----CCCCCceeecCCCCCCChhHHHHHHHHHHHHHHhcceEEEE
Q 018817            2 FCVKGLSESGRLTSVPSKYFFEKDLNDDCIN---S----EAETIPIIDFSMLTSGSPEQRYKTIQAIGNACLKWGFFEVI   74 (350)
Q Consensus         2 ~~~~~~~~~~~~~~~p~~y~~~~~~~~~~~~---~----~~~~lPvIDl~~l~~~d~~~r~~~~~~l~~A~~~~GfF~l~   74 (350)
                      .+||+|+++| +.+||++|+||+++++....   .    ...+||||||+.|.+++++.|.+++++|.+||++||||||+
T Consensus         5 ~~v~~l~~~~-~~~vP~~~~~p~~~~~~~~~~~~~~~~~~~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFF~v~   83 (356)
T 1gp6_A            5 ERVESLAKSG-IISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLI   83 (356)
T ss_dssp             CCHHHHHHTT-CSSCCGGGSCCHHHHTTCCCHHHHHHCCCSCCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEEEE
T ss_pred             ccHHHHHhcC-CCCCCHHhcCCchhcccccccccccccccCCCCCEEEchhccCCChHHHHHHHHHHHHHHHhCCEEEEe
Confidence            5799999998 99999999999877765322   1    13479999999998778878999999999999999999999


Q ss_pred             eCCCChHHHHHHHHHHHHHhcCCHHHHhhHhcCCC-CCceecccccccCCCcccchhhcccccccC-----CCCCCCCCc
Q 018817           75 NHGVPNTLRDEMIRASESFFDLSDEQKREYAGKKL-FDPIRWGTSFNVNVDKTLFWRDYLKIHVHP-----QFNAPQNPL  148 (350)
Q Consensus        75 nhGi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~-~~~~Gy~~~~~~~~~~~~d~~e~~~~~~~p-----~~~wP~~~~  148 (350)
                      ||||+.++++++++.+++||+||.|+|+++..... ..+.||+........+..||+|.|.++..|     .+.||+.++
T Consensus        84 nHGi~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~~Gy~~~~~~~~~~~~d~kE~~~~~~~p~~~~~~~~wP~~~~  163 (356)
T 1gp6_A           84 NHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPS  163 (356)
T ss_dssp             SCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEEEEEEESGGGCCGGGSCCSST
T ss_pred             CCCCCHHHHHHHHHHHHHHHCCCHHHHHhhcccccccCccccCcCcccCCCCCCChhheeeeecCCccccccccCCCcch
Confidence            99999999999999999999999999999966544 567899876544556788999999887644     345999999


Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHhhcccC--CcccceeccccCCCCCCCccccCCCcccCCceeEE
Q 018817          149 GFSETIQEYCKRVRELANELLKGIMESLGLEESYIQKAMDLET--DSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTIL  226 (350)
Q Consensus       149 ~fr~~~~~y~~~~~~la~~ll~~l~~~Lgl~~~~~~~~~~~~~--~~~~~lrl~~Yp~~~~~~~~~~~~~HtD~~~lTll  226 (350)
                      +||+.+++|+++|.+++.+||++|+++||+++++|.+.+  ..  .+.+.||++||||++.++..+|+++|||+|+||||
T Consensus       164 ~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~--~~~~~~~~~lrl~~YPp~~~~~~~~g~~~HtD~g~lTlL  241 (356)
T 1gp6_A          164 DYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEV--GGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFI  241 (356)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHT--THHHHCEEEEEEEEECCCSSTTTCCSEEEECCCSSEEEE
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHh--cccCCccceeeeeecCCCCCcccccCcCCccCCCeEEEE
Confidence            999999999999999999999999999999999999988  31  25678999999999988888999999999999999


Q ss_pred             eeCCCCCcccccCCceEecCCCCCcEEEEecchhHHhhCCccccccceeecCCCCceeEEEEeeCCCCCc-eeecCcccc
Q 018817          227 MQNDHVGLHVRHDGKWIPVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAVVNGKATRISVATAHGPPLDT-VVGPAQDLL  305 (350)
Q Consensus       227 ~q~~~~GLqv~~~g~W~~V~~~~g~~iVn~Gd~l~~~TnG~~~a~~HRVv~~~~~~R~Si~~F~~p~~d~-~i~pl~~~~  305 (350)
                      +||.++||||+++|+|++|+|.||++|||+||+||+||||+|||++|||+.++.++|||++||++|+.|+ +|.|+++++
T Consensus       242 ~qd~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~~~i~pl~~~~  321 (356)
T 1gp6_A          242 LHNMVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEMV  321 (356)
T ss_dssp             EECSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSCCEEEEEEEEECCTTTCEECCCGGGC
T ss_pred             EEcCCCCeEEecCCcEEECcCCCCeEEEEeccHHHHhcCCEeeccCceecCCCCCCEEEEEEeecCCCCCcEEeCChhhc
Confidence            9999999999999999999999999999999999999999999999999998888999999999999999 999999999


Q ss_pred             CCCCCCCCCCCcCHHHHHHHHHHccCCC
Q 018817          306 DNENRPPLYRGIKYREYLQLQQSNQLNG  333 (350)
Q Consensus       306 ~~~~~~~~y~~~~~~e~~~~~~~~~~~~  333 (350)
                      ++ ++|++|+++|++||+..++..++.+
T Consensus       322 ~~-~~p~~y~~~t~~eyl~~~~~~~~d~  348 (356)
T 1gp6_A          322 SV-ESPAKFPPRTFAQHIEHKLFGKEQE  348 (356)
T ss_dssp             CS-SSCCSSCCEEHHHHHHHHHHHHHHH
T ss_pred             CC-CCCccCCCccHHHHHHHHHHhccCc
Confidence            98 8899999999999999887765533
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Back     alignment and structure
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Back     alignment and structure
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155} Back     alignment and structure
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A* Back     alignment and structure
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 350
d1gp6a_349 b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cr 3e-75
d1w9ya1307 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxyla 5e-70
d1dcsa_311 b.82.2.1 (A:) Deacetoxycephalosporin C synthase {S 5e-56
d1odma_329 b.82.2.1 (A:) Isopenicillin N synthase {Emericella 2e-54
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 349 Back     information, alignment and structure

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Anthocyanidin synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  233 bits (595), Expect = 3e-75
 Identities = 110/346 (31%), Positives = 177/346 (51%), Gaps = 20/346 (5%)

Query: 4   VKGLSESGRLTSVPSKYFF-------EKDLNDDCINSEAETIPIIDFSMLTSGSPEQRYK 56
           V+ L++SG + S+P +Y           D+  +    +   +P ID   + S   + R  
Sbjct: 6   VESLAKSG-IISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIREN 64

Query: 57  TIQAIGNACLKWGFFEVINHGVPNTLRDEMIRASESFFDLSDEQKREYAGKKLFDPIRW- 115
            I+ +  A L WG   +INHG+P  L + + +A E FF LS E+K +YA  +    I+  
Sbjct: 65  CIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGY 124

Query: 116 GTSFNVNVDKTLFWRDYLKIHVHPQFNAPQN-----PLGFSETIQEYCKRVRELANELLK 170
           G+    N    L W DY     +P+     +     P  + E   EY K +R LA ++ K
Sbjct: 125 GSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFK 184

Query: 171 GIMESLGLEESYIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQND 230
            +   LGLE   ++K +    +    + +N YP CPQPE+ +G+  H+D   LT ++ N 
Sbjct: 185 ALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHNM 244

Query: 231 HVGLHVRHDGKWIPVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAVVNGKATRISVATAH 290
             GL + ++GKW+     P S V++IGD +EILSNGKYKS+LHR +VN +  RIS A   
Sbjct: 245 VPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFC 304

Query: 291 GPPLDTVV-GPAQDLLDNENRPPLYRGIKYREYLQLQQSNQLNGKS 335
            PP D +V  P  +++  E+ P  +    + ++++    ++L GK 
Sbjct: 305 EPPKDKIVLKPLPEMVSVES-PAKFPPRTFAQHIE----HKLFGKE 345
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Length = 307 Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Length = 311 Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Length = 329 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query350
d1gp6a_349 Anthocyanidin synthase {Mouse-ear cress (Arabidops 100.0
d1w9ya1307 1-aminocyclopropane-1-carboxylate oxidase 1 {Petun 100.0
d1odma_329 Isopenicillin N synthase {Emericella nidulans [Tax 100.0
d1dcsa_311 Deacetoxycephalosporin C synthase {Streptomyces cl 100.0
d2iuwa1210 AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606] 86.89
d2fdia1200 Alkylated DNA repair protein AlkB {Escherichia col 81.11
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Anthocyanidin synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=2.2e-77  Score=567.56  Aligned_cols=326  Identities=32%  Similarity=0.564  Sum_probs=286.2

Q ss_pred             cchhhhhhcCCCCCCCCCCCCCCCCCCCCC-------CCCCCCCceeecCCCCCCChhHHHHHHHHHHHHHHhcceEEEE
Q 018817            2 FCVKGLSESGRLTSVPSKYFFEKDLNDDCI-------NSEAETIPIIDFSMLTSGSPEQRYKTIQAIGNACLKWGFFEVI   74 (350)
Q Consensus         2 ~~~~~~~~~~~~~~~p~~y~~~~~~~~~~~-------~~~~~~lPvIDl~~l~~~d~~~r~~~~~~l~~A~~~~GfF~l~   74 (350)
                      -+||+|+++| +++||++|+||++++|.+.       .....+||||||+.|.+++++.|++++++|.+||+++|||||+
T Consensus         4 ~~~~~~~~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFf~l~   82 (349)
T d1gp6a_           4 ERVESLAKSG-IISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLI   82 (349)
T ss_dssp             CCHHHHHHTT-CSSCCGGGSCCHHHHTTCCCHHHHHHCCCSCCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEEEE
T ss_pred             cchHHHHhCC-CccCCHhhcCChhhcCCCCccccccccCCCCCcCeEEChhcCCCCHHHHHHHHHHHHHHHHhCCEEEEE
Confidence            4799999999 9999999999999888752       2345689999999999999989999999999999999999999


Q ss_pred             eCCCChHHHHHHHHHHHHHhcCCHHHHhhHhcCCC-CCceecccccccCCCcccchhhcccccc-----cCCCCCCCCCc
Q 018817           75 NHGVPNTLRDEMIRASESFFDLSDEQKREYAGKKL-FDPIRWGTSFNVNVDKTLFWRDYLKIHV-----HPQFNAPQNPL  148 (350)
Q Consensus        75 nhGi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~-~~~~Gy~~~~~~~~~~~~d~~e~~~~~~-----~p~~~wP~~~~  148 (350)
                      ||||+.++++++++++++||+||.|+|+++..... +++.+|+...........+|.+.+....     ...+.||+.++
T Consensus        83 nHGI~~~li~~~~~~~~~FF~lP~eeK~k~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~wp~~~~  162 (349)
T d1gp6a_          83 NHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPS  162 (349)
T ss_dssp             SCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEEEEEEESGGGCCGGGSCCSST
T ss_pred             ccCCCHHHHHHHHHHHHHHHcCCHHHHhhhhcccccCCccccccccccccccccchhhhhcccccccccccccccccccc
Confidence            99999999999999999999999999999965432 3345565544444445556665543221     22345999999


Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHhhcccCCcccceeccccCCCCCCCccccCCCcccCCceeEEee
Q 018817          149 GFSETIQEYCKRVRELANELLKGIMESLGLEESYIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQ  228 (350)
Q Consensus       149 ~fr~~~~~y~~~~~~la~~ll~~l~~~Lgl~~~~~~~~~~~~~~~~~~lrl~~Yp~~~~~~~~~~~~~HtD~~~lTll~q  228 (350)
                      .|++.+.+|+++|.+++..|+++++++||+++++|.+.+.......+.||++|||+++.+...+|+++|||+|+||||+|
T Consensus       163 ~f~e~~~~~~~~~~~la~~ll~~la~~Lgl~~~~~~~~~~~~~~~~~~lrl~~Yp~~~~~~~~~g~~~HtD~g~lTlL~q  242 (349)
T d1gp6a_         163 DYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILH  242 (349)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHTTHHHHCEEEEEEEEECCCSSTTTCCSEEEECCCSSEEEEEE
T ss_pred             hHHHHHHHHHHHHHHHHHhhhHHHHHHcCCCHHHHHHHhccccccceeeeecccccccchhhccccccCCCCcceEEEec
Confidence            99999999999999999999999999999999999887632114567899999999999888999999999999999999


Q ss_pred             CCCCCcccccCCceEecCCCCCcEEEEecchhHHhhCCccccccceeecCCCCceeEEEEeeCCCCCcee-ecCccccCC
Q 018817          229 NDHVGLHVRHDGKWIPVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAVVNGKATRISVATAHGPPLDTVV-GPAQDLLDN  307 (350)
Q Consensus       229 ~~~~GLqv~~~g~W~~V~~~~g~~iVn~Gd~l~~~TnG~~~a~~HRVv~~~~~~R~Si~~F~~p~~d~~i-~pl~~~~~~  307 (350)
                      +.++||||+.+|+|++|+|.+|++|||+||+||+||||+|+|++|||+.+++++||||+||++|+.|++| +|+++|+++
T Consensus       243 ~~~~GLqv~~~g~W~~V~p~~~a~vVNvGD~l~~~TnG~~~St~HRVv~~~~~~R~Si~~F~~p~~d~~i~~pl~~~v~~  322 (349)
T d1gp6a_         243 NMVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEMVSV  322 (349)
T ss_dssp             CSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSCCEEEEEEEEECCTTTCEECCCGGGCCS
T ss_pred             cCCcceeeecCCceEEccCCCCCeeeeHHhHHHHHhCCCccCcCccccCCCCCCeEEEEEEecCCCcceeecCCHHHcCC
Confidence            9999999999999999999999999999999999999999999999999988899999999999999865 899999998


Q ss_pred             CCCCCCCCCcCHHHHHHHHHHc
Q 018817          308 ENRPPLYRGIKYREYLQLQQSN  329 (350)
Q Consensus       308 ~~~~~~y~~~~~~e~~~~~~~~  329 (350)
                       ++|++|+|+|++||++.++..
T Consensus       323 -~~p~~y~~~t~~e~~~~rl~~  343 (349)
T d1gp6a_         323 -ESPAKFPPRTFAQHIEHKLFG  343 (349)
T ss_dssp             -SSCCSSCCEEHHHHHHHHHHH
T ss_pred             -CCCCCCCCccHHHHHHHHHhc
Confidence             899999999999999987743
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure
>d2iuwa1 b.82.2.10 (A:70-279) AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2fdia1 b.82.2.10 (A:15-214) Alkylated DNA repair protein AlkB {Escherichia coli [TaxId: 562]} Back     information, alignment and structure