Citrus Sinensis ID: 018849

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------35
MRRSHARTRINSNMDPIKLHTRPLTRSTNLFSRNPKPTKSNPSSFAIPIALTATLITLISCYYVFIHAAKPSFPPSSVKYGVLLDGGSTGTRIHVFSYDTETNHFDFDLGSMRLNPGLSSYAVNPTNAGDSLKDLLDFAKRKVPPAFWADTEIRLMATAGLRLVDVVVQDKILDSCRRVLRVSGFRFADDWATVITGSDEGVYAWIVANYALGTLGGDPSETTGIIELGGASVQVTFVSDEPLPQEFSRTLKFGNVTYNLYSHSFLHFGQNVAFETLRELLSSGDFNTAAESLQKGTYIDPCSPKGYLHHVESSPGSLAAKIDLSTLQAGGNFSECRSAALTLLQNGKG
ccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEEEEccccccEEEEEEEccccccccccccccccccccccccccccHHHHHHHHHHHHHHHcccccccccccEEEEEccccccccHHHHHHHHHHHHHHHHHcccccccccEEEEccccccHHHHHHHHHHHccccccccccEEEEEEcccEEEEEEcccccccccccEEEEEccEEEEEEEEEcccccHHHHHHHHHHHHHcccccccHHccccccccccccccccEEEEEEcccccccccccccccccccHHHHHHHHHHHHHcccc
cccccccccccccccccEEEcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccEEEEEEEccccccEEEEEEEcccccccccEEEEEEcccccccccccHHHHHHHHHHHHHHHHHHccHHHcccccEEEEEccHHHcccHHHHHHHHHHHHHHHHHcccccccccEEEEcccccHHHHHEEHHHHHHHcccccccEEEEEEcccccEEEEEEcccccccccEEEEEEcccEEEEEEEcHHcHcHHHHHHHHHHHHHHccccccccccccccccccccccccEEEEEEcccEEccccccccccccccHHHHHHHHHHHHHcccc
mrrshartrinsnmdpiklhtrpltrstnlfsrnpkptksnpssfaIPIALTATLITLISCYYVFihaakpsfppssvkygvlldggstgtrihvfsydtetnhfdfdlgsmrlnpglssyavnptnagdsLKDLLDFAkrkvppafwadTEIRLMATAGLRLVDVVVQDKILDSCRRVLRVsgfrfaddwatvitgsdegVYAWIVANYAlgtlggdpsettgiielggasvqvtfvsdeplpqefsrtlkfgnvtYNLYSHSFLHFGQNVAFETLRELLSsgdfntaaeslqkgtyidpcspkgylhhvesspgslaakidlstlqaggnfsECRSAALTLLQNGKG
mrrshartrinsnmdpiklhtrpltrstnlfsrnpkptksnpssfAIPIALTATLITLISCYYVFIHAAKPSFPPSSVKYGVLLDGGSTGTRIHVFSYDTETNHFDFDLGSMRLNPGLSSYAVNPTNAGDSLKDLLDFAKRKVPPAFWADTEIRLMATAGLRLVDVVVQDKILDSCRRVlrvsgfrfaddwatvitgsdegVYAWIVANYALGTLGGDPSETTGIIELGGASVQVTFVSDEPLPQEFSRTLKFGNVTYNLYSHSFLHFGQNVAFETLRELLSSGDFNTAAESLQKGTYIDPCSPKGYLHHVESSPGSLAAKIDLSTLQAGGNFSECRSAALTLLQNGKG
MRRSHARTRINSNMDPIKLHTRPLTRSTNLFSRNPKPTKSNPSSFAIPIALTATLITLISCYYVFIHAAKPSFPPSSVKYGVLLDGGSTGTRIHVFSYDTETNHFDFDLGSMRLNPGLSSYAVNPTNAGDSLKDLLDFAKRKVPPAFWADTEIRLMATAGLRLVDVVVQDKILDSCRRVLRVSGFRFADDWATVITGSDEGVYAWIVANYALGTLGGDPSETTGIIELGGASVQVTFVSDEPLPQEFSRTLKFGNVTYNLYSHSFLHFGQNVAFETLRELLSSGDFNTAAESLQKGTYIDPCSPKGYLHHVESSPGSLAAKIDLSTLQAGGNFSECRSAALTLLQNGKG
********************************************FAIPIALTATLITLISCYYVFIHAAKPSFPPSSVKYGVLLDGGSTGTRIHVFSYDTETNHFDFDLGSMRLNPGLSSYAVNPTNAGDSLKDLLDFAKRKVPPAFWADTEIRLMATAGLRLVDVVVQDKILDSCRRVLRVSGFRFADDWATVITGSDEGVYAWIVANYALGTLGGDPSETTGIIELGGASVQVTFVSDEPLPQEFSRTLKFGNVTYNLYSHSFLHFGQNVAFETLRELLSSGDFNTAAESLQKGTYIDPCSPKGYLHHV**********IDLSTL**********************
**********************************************IPIALTATLITLISCYYVFIHAAKPS*PPSSVKYGVLLDGGSTGTRIHVFSYDTETNHFDFDLGSMRLNPGLSSYAVNPTNAGDSLKDLLDFAKRKVPPAFWADTEIRLMATAGLRLVDVVVQDKILDSCRRVLRVSGFRFADDWATVITGSDEGVYAWIVANYALGTLGGDPSETTGIIELGGASVQVTFVSDEPLPQEFSRTLKFGNVTYNLYSHSFLHFGQNVAFETLRELLSS*************TYIDPCSPKGYLHHVESSPGSL************GNFSECRSAALTLLQNG**
********RINSNMDPIKLHTRPLTRSTNLFSR********PSSFAIPIALTATLITLISCYYVFIHAAKPSFPPSSVKYGVLLDGGSTGTRIHVFSYDTETNHFDFDLGSMRLNPGLSSYAVNPTNAGDSLKDLLDFAKRKVPPAFWADTEIRLMATAGLRLVDVVVQDKILDSCRRVLRVSGFRFADDWATVITGSDEGVYAWIVANYALGTLGGDPSETTGIIELGGASVQVTFVSDEPLPQEFSRTLKFGNVTYNLYSHSFLHFGQNVAFETLRELLSSGDFNTAAESLQKGTYIDPCSPKGYLHHVESSPGSLAAKIDLSTLQAGGNFSECRSAALTLLQNGKG
***************************************SNPSSFAIPIALTATLITLISCYYVFIHAAKPSFPPSSVKYGVLLDGGSTGTRIHVFSYDTETNHFDFDLGSMRLNPGLSSYAVNPTNAGDSLKDLLDFAKRKVPPAFWADTEIRLMATAGLRLVDVVVQDKILDSCRRVLRVSGFRFADDWATVITGSDEGVYAWIVANYALGTLGGDPSETTGIIELGGASVQVTFVSDEPLPQEFSRTLKFGNVTYNLYSHSFLHFGQNVAFETLRELLSSGDFNTA*****KGTYIDPCSPKGYLHHVESSPGSLAAKID*****AGGNFSECRSAALTLLQN***
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MRRSHARTRINSNMDPIKLHTRPLTRSTNLFSRNPKPTKSNPSSFAIPIALTATLITLISCYYVFIHAAKPSFPPSSVKYGVLLDGGSTGTRIHVFSYDTETNHFDFDLGSMRLNPGLSSYAVNPTNAGDSLKDLLDFAKRKVPPAFWADTEIRLMATAGLRLVDVVVQDKILDSCRRVLRVSGFRFADDWATVITGSDEGVYAWIVANYALGTLGGDPSETTGIIELGGASVQVTFVSDEPLPQEFSRTLKFGNVTYNLYSHSFLHFGQNVAFETLRELLSSGDFNTAAESLQKGTYIDPCSPKGYLHHVESSPGSLAAKIDLSTLQAGGNFSECRSAALTLLQNGKG
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query349 2.2.26 [Sep-21-2011]
O80612 555 Probable apyrase 6 OS=Ara yes no 0.985 0.619 0.513 5e-97
Q8H1D8 503 Probable apyrase 4 OS=Ara no no 0.979 0.679 0.511 3e-90
Q6NQA8 488 Probable apyrase 5 OS=Ara no no 0.948 0.678 0.474 2e-83
Q9XI62 483 Probable apyrase 3 OS=Ara no no 0.873 0.631 0.492 2e-79
Q6Z4P2 467 Probable apyrase 2 OS=Ory no no 0.730 0.546 0.346 4e-36
E1C1L6 428 Ectonucleoside triphospha yes no 0.647 0.528 0.365 8e-35
Q8H7L6 489 Probable apyrase 1 OS=Ory no no 0.719 0.513 0.323 6e-34
E1BPW0 432 Ectonucleoside triphospha yes no 0.673 0.543 0.332 1e-33
Q2QYE1 451 Probable apyrase 3 OS=Ory no no 0.704 0.545 0.327 4e-33
P80595 454 Apyrase OS=Solanum tubero N/A no 0.550 0.422 0.393 5e-33
>sp|O80612|APY6_ARATH Probable apyrase 6 OS=Arabidopsis thaliana GN=APY6 PE=2 SV=2 Back     alignment and function desciption
 Score =  354 bits (909), Expect = 5e-97,   Method: Compositional matrix adjust.
 Identities = 188/366 (51%), Positives = 251/366 (68%), Gaps = 22/366 (6%)

Query: 1   MRRSHARTRIN------SNMDPIKLHTRPLTR---STNLFSRNPKPTKSNPSSFAIPI-A 50
           MRRSHAR+R+       S+MDPIK   R   R   S++ ++     +K   S+  + + +
Sbjct: 1   MRRSHARSRVKNSSSSKSDMDPIKFQIRSGNRAPSSSSTYTLTKPNSKHAKSNLLLTVGS 60

Query: 51  LTATLITLISCYYVFIHAAKPSFPPSSVKYGVLLDGGSTGTRIHVFSYDTETNH--FDF- 107
           ++  L  L  CY +            S++Y V++DGGSTGTRIHVF Y  E+    F+F 
Sbjct: 61  ISVVLGVLFLCYSILFSGGNLR---GSLRYSVVIDGGSTGTRIHVFGYRIESGKPVFEFR 117

Query: 108 --DLGSMRLNPGLSSYAVNPTNAGDSLKDLLDFAKRKVPPAFWADTEIRLMATAGLRLVD 165
             +  S++L+PGLS++A +P  A  SL +L++FAK +VP   W +TE+RLMATAG+RL++
Sbjct: 118 GANYASLKLHPGLSAFADDPDGASVSLTELVEFAKGRVPKGMWIETEVRLMATAGMRLLE 177

Query: 166 VVVQDKILDSCRRVLRVSGFRFADDWATVITGSDEGVYAWIVANYALGTLGGDPSETTGI 225
           + VQ+KIL   RRVL+ SGF F D+WA+VI+GSDEGVYAW+VAN+ALG+LGGDP +TTGI
Sbjct: 178 LPVQEKILGVARRVLKSSGFLFRDEWASVISGSDEGVYAWVVANFALGSLGGDPLKTTGI 237

Query: 226 IELGGASVQVTFVSDEPLPQEFSRTLKFGNVTYNLYSHSFLHFGQNVAFETLRELLSSGD 285
           +ELGGAS QVTFVS EP+P EFSRT+ FGNVTYNLYSHSFLHFGQN A + L   L S D
Sbjct: 238 VELGGASAQVTFVSSEPMPPEFSRTISFGNVTYNLYSHSFLHFGQNAAHDKLWGSLLSRD 297

Query: 286 FNTAAESLQKGTYIDPCSPKGYLHHVESSP---GSLAAKIDLS-TLQAGGNFSECRSAAL 341
            N+A E  ++  + DPC+PKGY     +     G LA +  LS + QAGGN+S+CRSAAL
Sbjct: 298 HNSAVEPTREKIFTDPCAPKGYNLDANTQKHLSGLLAEESRLSDSFQAGGNYSQCRSAAL 357

Query: 342 TLLQNG 347
           T+LQ+G
Sbjct: 358 TILQDG 363
Catalyzes the hydrolysis of phosphoanhydride bonds of nucleoside tri- and di-phosphates (By similarity). Involved in the regulation of pollen and anther development.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 6EC: .EC: 1EC: .EC: 5
>sp|Q8H1D8|APY4_ARATH Probable apyrase 4 OS=Arabidopsis thaliana GN=APY4 PE=2 SV=1 Back     alignment and function description
>sp|Q6NQA8|APY5_ARATH Probable apyrase 5 OS=Arabidopsis thaliana GN=APY5 PE=2 SV=1 Back     alignment and function description
>sp|Q9XI62|APY3_ARATH Probable apyrase 3 OS=Arabidopsis thaliana GN=APY3 PE=2 SV=1 Back     alignment and function description
>sp|Q6Z4P2|APY2_ORYSJ Probable apyrase 2 OS=Oryza sativa subsp. japonica GN=APY2 PE=2 SV=1 Back     alignment and function description
>sp|E1C1L6|ENTP5_CHICK Ectonucleoside triphosphate diphosphohydrolase 5 OS=Gallus gallus GN=ENTPD5 PE=3 SV=1 Back     alignment and function description
>sp|Q8H7L6|APY1_ORYSJ Probable apyrase 1 OS=Oryza sativa subsp. japonica GN=APY1 PE=3 SV=1 Back     alignment and function description
>sp|E1BPW0|ENTP5_BOVIN Ectonucleoside triphosphate diphosphohydrolase 5 OS=Bos taurus GN=ENTPD5 PE=3 SV=1 Back     alignment and function description
>sp|Q2QYE1|APY3_ORYSJ Probable apyrase 3 OS=Oryza sativa subsp. japonica GN=APY3 PE=2 SV=2 Back     alignment and function description
>sp|P80595|APY_SOLTU Apyrase OS=Solanum tuberosum GN=RROP1 PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query349
224101353 536 predicted protein [Populus trichocarpa] 0.951 0.619 0.595 1e-111
356499809 537 PREDICTED: ectonucleoside triphosphate d 0.965 0.627 0.576 1e-107
449442295 545 PREDICTED: probable apyrase 6-like [Cucu 0.979 0.627 0.572 1e-107
449495929 545 PREDICTED: probable apyrase 6-like [Cucu 0.979 0.627 0.572 1e-107
356498268 539 PREDICTED: ectonucleoside triphosphate d 0.962 0.623 0.571 1e-105
224109012 508 predicted protein [Populus trichocarpa] 0.888 0.610 0.591 1e-105
356499811 533 PREDICTED: ectonucleoside triphosphate d 0.954 0.624 0.567 1e-103
255562862 532 adenosine diphosphatase, putative [Ricin 0.942 0.618 0.555 1e-103
357486973 583 Ectonucleoside triphosphate diphosphohyd 0.977 0.584 0.572 1e-101
356499813 533 PREDICTED: ectonucleoside triphosphate d 0.954 0.624 0.559 1e-100
>gi|224101353|ref|XP_002312246.1| predicted protein [Populus trichocarpa] gi|222852066|gb|EEE89613.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  407 bits (1046), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 216/363 (59%), Positives = 264/363 (72%), Gaps = 31/363 (8%)

Query: 1   MRRSHARTRINSN------MDP-IKLHTRPL-TRSTNLFSRNPKPTKSNPSSFAIPIALT 52
           MRR HAR R++SN      MDP IKLH+R + TRST       K  KS        + + 
Sbjct: 1   MRRPHARNRVDSNTTDQQKMDPSIKLHSRTISTRSTKF-----KYAKSK-------LVII 48

Query: 53  ATLITLISCYYVFIHAAKPSFPPSSVKYGVLLDGGSTGTRIHVFSYDTETNH---FDFDL 109
            TLI L+SCYY+F    K SF   S  YG+++DGGSTGTRIHV  Y  E+     FD + 
Sbjct: 49  ITLIALLSCYYLFKSKTK-SF---SKMYGIIIDGGSTGTRIHVLGYRIESGGKVVFDLEE 104

Query: 110 GSMRLNPGLSSYAVNPTNAGDSLKDLLDFAKRKVPPAFWADTEIRLMATAGLRLVDVVVQ 169
           G+M++NPGLS+YA +P  AG S+++L++F K +VP   W +TE+RLMATAG+RL+D   +
Sbjct: 105 GAMKVNPGLSAYAGDPEGAGGSVEELVEFGKGRVPRELWGETEVRLMATAGMRLLDSEAR 164

Query: 170 DKILDSCRRVLRVSGFRFADDWATVITGSDEGVYAWIVANYALGTLGGDPSETTGIIELG 229
           D+ILD CRRVLR SGF+F D WA+VITGSDEG+YAW++ANYALGTLGGDP ETTGIIELG
Sbjct: 165 DRILDVCRRVLRKSGFKFQDSWASVITGSDEGLYAWVIANYALGTLGGDPLETTGIIELG 224

Query: 230 GASVQVTFVSDEPLPQEFSRTLKFGNVTYNLYSHSFLHFGQNVAFETLRELLSSGDFNTA 289
           GAS QV FVS EP+P EFSRT++FGN+TYN+YSHSFL+ GQN A E LRE L SG+ + A
Sbjct: 225 GASAQVAFVSTEPVPPEFSRTVEFGNITYNVYSHSFLNLGQNAASEALRESLVSGNHHPA 284

Query: 290 AESLQKGTYIDPCSPKGYLHHVES---SPGSLAAKID-LSTLQAGGNFSECRSAALTLLQ 345
           AESL KG ++DPC+PKGY   VES   SPGSL  K   +STL + GNFSECRSAALTLLQ
Sbjct: 285 AESLGKGIFVDPCTPKGYSRVVESLKLSPGSLTEKNRFVSTLHSRGNFSECRSAALTLLQ 344

Query: 346 NGK 348
            GK
Sbjct: 345 KGK 347

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|356499809|ref|XP_003518729.1| PREDICTED: ectonucleoside triphosphate diphosphohydrolase 1-like isoform 1 [Glycine max] Back     alignment and taxonomy information
>gi|449442295|ref|XP_004138917.1| PREDICTED: probable apyrase 6-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449495929|ref|XP_004159988.1| PREDICTED: probable apyrase 6-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356498268|ref|XP_003517975.1| PREDICTED: ectonucleoside triphosphate diphosphohydrolase 1-like isoform 1 [Glycine max] Back     alignment and taxonomy information
>gi|224109012|ref|XP_002315051.1| predicted protein [Populus trichocarpa] gi|222864091|gb|EEF01222.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356499811|ref|XP_003518730.1| PREDICTED: ectonucleoside triphosphate diphosphohydrolase 1-like isoform 2 [Glycine max] Back     alignment and taxonomy information
>gi|255562862|ref|XP_002522436.1| adenosine diphosphatase, putative [Ricinus communis] gi|223538321|gb|EEF39928.1| adenosine diphosphatase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|357486973|ref|XP_003613774.1| Ectonucleoside triphosphate diphosphohydrolase [Medicago truncatula] gi|355515109|gb|AES96732.1| Ectonucleoside triphosphate diphosphohydrolase [Medicago truncatula] Back     alignment and taxonomy information
>gi|356499813|ref|XP_003518731.1| PREDICTED: ectonucleoside triphosphate diphosphohydrolase 1-like isoform 3 [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query349
TAIR|locus:2056725 555 AT2G02970 [Arabidopsis thalian 0.977 0.614 0.520 1.1e-89
TAIR|locus:2035781 503 AT1G14230 [Arabidopsis thalian 0.979 0.679 0.511 8.2e-83
TAIR|locus:2035802 488 AT1G14250 [Arabidopsis thalian 0.948 0.678 0.485 7.1e-77
TAIR|locus:2035786 483 AT1G14240 "AT1G14240" [Arabido 0.873 0.631 0.492 8.4e-74
UNIPROTKB|E1C1L6 428 ENTPD5 "Ectonucleoside triphos 0.627 0.511 0.376 1.7e-34
UNIPROTKB|E1BPW0 432 ENTPD5 "Ectonucleoside triphos 0.633 0.511 0.347 7.4e-34
UNIPROTKB|G5E5P3 428 ENTPD5 "Ectonucleoside triphos 0.633 0.516 0.347 7.4e-34
UNIPROTKB|D2GZV9 433 ENTPD5 "Ectonucleoside triphos 0.673 0.542 0.336 2.5e-33
UNIPROTKB|Q9QYC8 469 ENTPD5 "Ectonucleoside triphos 0.633 0.471 0.352 3.2e-33
ZFIN|ZDB-GENE-050417-412 442 entpd6 "ectonucleoside triphos 0.581 0.459 0.366 5.2e-33
TAIR|locus:2056725 AT2G02970 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 895 (320.1 bits), Expect = 1.1e-89, P = 1.1e-89
 Identities = 192/369 (52%), Positives = 252/369 (68%)

Query:     1 MRRSHARTRIN------SNMDPIKLHTR-----PLTRSTNLFSR-NPKPTKSNPSSFAIP 48
             MRRSHAR+R+       S+MDPIK   R     P + ST   ++ N K  KSN     + 
Sbjct:     1 MRRSHARSRVKNSSSSKSDMDPIKFQIRSGNRAPSSSSTYTLTKPNSKHAKSN---LLLT 57

Query:    49 I-ALTATLITLISCYYVFIHAAKPSFPPSSVKYGVLLDGGSTGTRIHVFSYDTETNH--F 105
             + +++  L  L  CY +            S++Y V++DGGSTGTRIHVF Y  E+    F
Sbjct:    58 VGSISVVLGVLFLCYSILFSGGNLR---GSLRYSVVIDGGSTGTRIHVFGYRIESGKPVF 114

Query:   106 DF---DLGSMRLNPGLSSYAVNPTNAGDSLKDLLDFAKRKVPPAFWADTEIRLMATAGLR 162
             +F   +  S++L+PGLS++A +P  A  SL +L++FAK +VP   W +TE+RLMATAG+R
Sbjct:   115 EFRGANYASLKLHPGLSAFADDPDGASVSLTELVEFAKGRVPKGMWIETEVRLMATAGMR 174

Query:   163 LVDVVVQDKILDSCRRVLRVSGFRFADDWATVITGSDEGVYAWIVANYALGTLGGDPSET 222
             L+++ VQ+KIL   RRVL+ SGF F D+WA+VI+GSDEGVYAW+VAN+ALG+LGGDP +T
Sbjct:   175 LLELPVQEKILGVARRVLKSSGFLFRDEWASVISGSDEGVYAWVVANFALGSLGGDPLKT 234

Query:   223 TGIIELGGASVQVTFVSDEPLPQEFSRTLKFGNVTYNLYSHSFLHFGQNVAFETLRELLS 282
             TGI+ELGGAS QVTFVS EP+P EFSRT+ FGNVTYNLYSHSFLHFGQN A + L   L 
Sbjct:   235 TGIVELGGASAQVTFVSSEPMPPEFSRTISFGNVTYNLYSHSFLHFGQNAAHDKLWGSLL 294

Query:   283 SGDFNTAAESLQKGTYIDPCSPKGYLHHVESSP---GSLAAKIDLS-TLQAGGNFSECRS 338
             S D N+A E  ++  + DPC+PKGY     +     G LA +  LS + QAGGN+S+CRS
Sbjct:   295 SRDHNSAVEPTREKIFTDPCAPKGYNLDANTQKHLSGLLAEESRLSDSFQAGGNYSQCRS 354

Query:   339 AALTLLQNG 347
             AALT+LQ+G
Sbjct:   355 AALTILQDG 363
GO:0016787 "hydrolase activity" evidence=IEA;ISS
TAIR|locus:2035781 AT1G14230 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2035802 AT1G14250 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2035786 AT1G14240 "AT1G14240" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|E1C1L6 ENTPD5 "Ectonucleoside triphosphate diphosphohydrolase 5" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|E1BPW0 ENTPD5 "Ectonucleoside triphosphate diphosphohydrolase 5" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|G5E5P3 ENTPD5 "Ectonucleoside triphosphate diphosphohydrolase 5" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|D2GZV9 ENTPD5 "Ectonucleoside triphosphate diphosphohydrolase 5" [Ailuropoda melanoleuca (taxid:9646)] Back     alignment and assigned GO terms
UNIPROTKB|Q9QYC8 ENTPD5 "Ectonucleoside triphosphate diphosphohydrolase 5" [Mesocricetus auratus (taxid:10036)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-050417-412 entpd6 "ectonucleoside triphosphate diphosphohydrolase 6 (putative function)" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
O80612APY6_ARATH3, ., 6, ., 1, ., 50.51360.98560.6198yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.6.1LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
fgenesh4_pg.C_LG_VIII000753
hypothetical protein (536 aa)
(Populus trichocarpa)
Predicted Functional Partners:
gw1.XVIII.3392.1
nucleotide kinase (EC-2.7.4.3) (500 aa)
     •  0.899
gw1.XVIII.1081.1
annotation not avaliable (148 aa)
     •  0.899
gw1.XVII.653.1
hypothetical protein (417 aa)
     •  0.899
gw1.XVI.658.1
hypothetical protein (198 aa)
     •  0.899
gw1.XVI.2051.1
annotation not avaliable (265 aa)
     •  0.899
gw1.XVI.1522.1
hypothetical protein (452 aa)
     •  0.899
gw1.XV.93.1
hypothetical protein (1112 aa)
     •  0.899
gw1.XV.3381.1
hypothetical protein (519 aa)
     •  0.899
gw1.XV.2929.1
adenylate kinase family protein (EC-2.7.4.14) (224 aa)
     •  0.899
gw1.XIII.2947.1
hypothetical protein (802 aa)
     •  0.899

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query349
pfam01150 421 pfam01150, GDA1_CD39, GDA1/CD39 (nucleoside phosph 4e-61
COG5371 549 COG5371, COG5371, Golgi nucleoside diphosphatase [ 3e-22
COG5371 549 COG5371, COG5371, Golgi nucleoside diphosphatase [ 3e-18
>gnl|CDD|216331 pfam01150, GDA1_CD39, GDA1/CD39 (nucleoside phosphatase) family Back     alignment and domain information 
 Score =  201 bits (512), Expect = 4e-61
 Identities = 98/294 (33%), Positives = 142/294 (48%), Gaps = 38/294 (12%)

Query: 75  PSSVKYGVLLDGGSTGTRIHVFSYDTETNHFDFDLGS----------MRLNPGLSSYAVN 124
             +VKYGV++D GS+GTR+HV+ +  E      DL             +L PGLSSYA  
Sbjct: 5   HENVKYGVVIDAGSSGTRLHVYKWKDE------DLDLLQIVPLIEEFKKLEPGLSSYATK 58

Query: 125 PTNAGDSLKDLLDFAKRKVPPAFWADTEIRLMATAGLRLVDVVVQDKILDSCRRVLR-VS 183
           P  A   L  LL+FA+  +P +  ++T + L ATAG+RL+    ++KIL + R  L+ +S
Sbjct: 59  PDEAAKYLMPLLEFAEEVIPDSQLSETPVFLGATAGMRLLPEDAKEKILRALRNGLKSLS 118

Query: 184 GFRFADDWATVITGSDEGVYAWIVANYALGTLGGDPS--ETTGIIELGGASVQVTFV-SD 240
            F   D    +I G++EG+Y WI  NY LG  G +     T G+I+LGGAS Q+ F  SD
Sbjct: 119 SFPVDDQGVRIIDGAEEGLYGWITINYLLGRFGWEKPRQSTFGVIDLGGASTQIAFAPSD 178

Query: 241 E-PLPQ-----EFSRTLKFGNVTYNLYSHSFLHFGQNVAFETLRELLSSGDFNTAAESLQ 294
           E  L          +  +     Y++Y HSFL +G N   E LR+ L+         +  
Sbjct: 179 ESVLNSKVEDGNLLQQERLYGEKYDVYVHSFLGYGAN---EALRKYLAK-----LISNSS 230

Query: 295 KGTYIDPCSPKGYLHHVESSPGSLAAKIDLSTLQAGGNFSECRSAALTLLQNGK 348
                DPC P G+   V  S            ++  GN+ +C  +   LL    
Sbjct: 231 NLILSDPCLPPGFNKTVSYSEVEFDVFA----IRGTGNYEQCSQSIRELLNKNA 280

Length = 421
>gnl|CDD|227664 COG5371, COG5371, Golgi nucleoside diphosphatase [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>gnl|CDD|227664 COG5371, COG5371, Golgi nucleoside diphosphatase [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 349
KOG1386 501 consensus Nucleoside phosphatase [Nucleotide trans 100.0
PF01150 434 GDA1_CD39: GDA1/CD39 (nucleoside phosphatase) fami 100.0
KOG1385 453 consensus Nucleoside phosphatase [Nucleotide trans 100.0
COG5371 549 Golgi nucleoside diphosphatase [Carbohydrate trans 99.96
COG5371 549 Golgi nucleoside diphosphatase [Carbohydrate trans 99.93
TIGR03706300 exo_poly_only exopolyphosphatase. It appears that 99.82
COG0248 492 GppA Exopolyphosphatase [Nucleotide transport and 99.8
PRK11031 496 guanosine pentaphosphate phosphohydrolase; Provisi 99.79
PRK10854 513 exopolyphosphatase; Provisional 99.78
PF02541285 Ppx-GppA: Ppx/GppA phosphatase family; InterPro: I 99.54
PRK15080267 ethanolamine utilization protein EutJ; Provisional 97.89
PRK09472 420 ftsA cell division protein FtsA; Reviewed 95.51
TIGR02529239 EutJ ethanolamine utilization protein EutJ family 95.44
CHL00094 621 dnaK heat shock protein 70 94.82
PRK05183 616 hscA chaperone protein HscA; Provisional 94.58
TIGR01174 371 ftsA cell division protein FtsA. This bacterial ce 94.55
PRK13410 668 molecular chaperone DnaK; Provisional 94.35
PRK13411 653 molecular chaperone DnaK; Provisional 94.21
PRK10719 475 eutA reactivating factor for ethanolamine ammonia 93.89
cd00012371 ACTIN Actin; An ubiquitous protein involved in the 93.78
TIGR02350 595 prok_dnaK chaperone protein DnaK. Members of this 93.71
smart00268 373 ACTIN Actin. ACTIN subfamily of ACTIN/mreB/sugarki 93.69
TIGR01991 599 HscA Fe-S protein assembly chaperone HscA. The Hea 93.69
COG0849 418 ftsA Cell division ATPase FtsA [Cell division and 93.66
PRK00290 627 dnaK molecular chaperone DnaK; Provisional 93.5
PRK13929335 rod-share determining protein MreBH; Provisional 93.45
KOG2517 516 consensus Ribulose kinase and related carbohydrate 93.06
PF06277 473 EutA: Ethanolamine utilisation protein EutA; Inter 92.89
PLN03184 673 chloroplast Hsp70; Provisional 92.86
PRK01433 595 hscA chaperone protein HscA; Provisional 92.5
PF00370245 FGGY_N: FGGY family of carbohydrate kinases, N-ter 92.46
PTZ00400 663 DnaK-type molecular chaperone; Provisional 92.4
PF00022 393 Actin: Actin; InterPro: IPR004000 Actin [, ] is a 91.75
PF06723326 MreB_Mbl: MreB/Mbl protein; InterPro: IPR004753 Ba 90.35
PF11104340 PilM_2: Type IV pilus assembly protein PilM;; PDB: 89.94
TIGR00241248 CoA_E_activ CoA-substrate-specific enzyme activase 89.57
PRK13930335 rod shape-determining protein MreB; Provisional 89.08
PTZ00186 657 heat shock 70 kDa precursor protein; Provisional 88.28
PTZ00281376 actin; Provisional 87.4
PTZ00004 378 actin-2; Provisional 87.32
TIGR01175348 pilM type IV pilus assembly protein PilM. This pro 87.3
PRK13927334 rod shape-determining protein MreB; Provisional 87.29
COG4972354 PilM Tfp pilus assembly protein, ATPase PilM [Cell 86.92
PTZ00452375 actin; Provisional 86.82
PTZ00466380 actin-like protein; Provisional 86.32
PF00012 602 HSP70: Hsp70 protein; InterPro: IPR013126 Heat sho 84.37
>KOG1386 consensus Nucleoside phosphatase [Nucleotide transport and metabolism] Back     alignment and domain information 
Probab=100.00  E-value=3.1e-71  Score=548.28  Aligned_cols=273  Identities=42%  Similarity=0.711  Sum_probs=236.2

Q ss_pred             CCCCceEEEEEEcCCCceEEEEEEeeC--CCCcccc---ccceeecCCCCcccCCCcchHHHHHHHHHHHHHHhCCCCCc
Q 018849           74 PPSSVKYGVLLDGGSTGTRIHVFSYDT--ETNHFDF---DLGSMRLNPGLSSYAVNPTNAGDSLKDLLDFAKRKVPPAFW  148 (349)
Q Consensus        74 ~~~~~~y~vVIDaGSsgtRl~Vy~~~~--~~~~~~~---~~~~~k~~pGLss~~~~~~~a~~~l~~Ll~~a~~~ip~~~~  148 (349)
                      .+...+|+|||||||+|||||||.|+.  +.|.+++   .....|++||||+|+++|++|..+|.+|+++|+++||+++|
T Consensus         4 ~~~~~kYgiviDaGSSgTrl~Vy~w~~~~g~~~~~i~~~~~~~~k~~PGiSsfa~nP~~a~~~l~pLlefA~~~IPk~~h   83 (501)
T KOG1386|consen    4 EPPNLKYGIVIDAGSSGTRLFVYKWPAESGNPLTGIVGQIYDCLKLGPGISSFADNPEGASVYLTPLLEFAKEHIPKEKH   83 (501)
T ss_pred             CCCcceEEEEEecCCCCceEEEEeecccCCCcccCccchhhcccccCCChhhhccChhhhHHHHHHHHHHHHhhCCHhhc
Confidence            345789999999999999999999987  3443332   23457899999999999999999999999999999999999


Q ss_pred             CCceEEEEeehhhcccChhcHHHHHHHHHHHhh-ccCccccCCceEEcCCccchhhHHHHHHHhhccCCC----C-CCCc
Q 018849          149 ADTEIRLMATAGLRLVDVVVQDKILDSCRRVLR-VSGFRFADDWATVITGSDEGVYAWIVANYALGTLGG----D-PSET  222 (349)
Q Consensus       149 ~~tpv~l~ATAGmR~L~~~~~~~il~~vr~~l~-~~~f~f~~~~v~VIsG~eEg~y~WvavNy~lg~l~~----~-~~~t  222 (349)
                      +.|||+++||||||+||..+|++||+.++++++ .++|.|.++||+||||+|||+|+|+++||++|+|..    + +..|
T Consensus        84 ~~Tpl~l~ATAGMRLL~~~~qeaIl~~l~~~l~~~s~f~f~~~~a~IIsG~~EGvYgWi~~NY~LG~f~~~~~~~~~~~T  163 (501)
T KOG1386|consen   84 KETPLFLGATAGMRLLPLAQQEAILEVLRRVLKSLSDFLFDDEWARIISGKEEGVYGWIAANYLLGRFGKKNRWDSRKET  163 (501)
T ss_pred             CCCCeEEEecccceecCcccHHHHHHHHHHhcccccCCcccccccEEeecccceehhhHHHHHHHHhccccCcccCCcce
Confidence            999999999999999999999999999999998 689999999999999999999999999999999986    3 5689


Q ss_pred             eeeEeeCCceeEEEeccC---CCCCccceeeeEec---ceeEEEEEeecccccHHHHHHHHHHHhccCCcchh--hhhcC
Q 018849          223 TGIIELGGASVQVTFVSD---EPLPQEFSRTLKFG---NVTYNLYSHSFLHFGQNVAFETLRELLSSGDFNTA--AESLQ  294 (349)
Q Consensus       223 ~gvlDlGGaStQI~f~~~---~~~~~~~~~~~~l~---~~~~~lys~S~Lg~G~~~ar~~~~~~l~~~~~~~~--~~~~~  294 (349)
                      +|+||||||||||||++.   +..++++..++.++   ...|+||+|||||||.|+|+++++.+|.+...+..  +....
T Consensus       164 ~G~lDlGGAS~QItFe~~~~~e~~~~~~~~~i~~G~~~~~~Y~ly~~SfLgyG~N~A~~ry~~~Ll~~~~n~n~~~~~~~  243 (501)
T KOG1386|consen  164 FGALDLGGASTQITFEPPNQQEEVPKENLQTINYGNDNLVKYRLYVHSFLGYGANEALDRYLAMLLEKLPNKNGLTGLTG  243 (501)
T ss_pred             eeeEecCCceeEEEEecCccccccchhhhhheecCCCCceEEEEEEEeecccchhHHHHHHHHHHHHhcccccccccccc
Confidence            999999999999999988   56777888899888   26799999999999999999999999887544422  23445


Q ss_pred             CCCcCCCCCCCCceeeeec-----CCCcccccc-ceeeeecCCCHHhHHHHHHHHHhc
Q 018849          295 KGTYIDPCSPKGYLHHVES-----SPGSLAAKI-DLSTLQAGGNFSECRSAALTLLQN  346 (349)
Q Consensus       295 ~~~~~~PC~p~Gy~~~~~~-----~~~~~~~~~-~~~~~~GtGnf~~C~~~v~~lL~~  346 (349)
                      +..+.|||+|+||..+++.     ++|.-..++ +.+.+.|||||++|+++|.++|++
T Consensus       244 ~~~~~DPC~p~Gy~~~~~~~~~~~~~~~e~~~~~~~~~~~GtGn~~~C~~~v~~ll~~  301 (501)
T KOG1386|consen  244 DNPLTDPCLPRGYNYDVNLSDVYSSPCPEESKNGQSIELQGTGNWSQCRSAVLPLLNF  301 (501)
T ss_pred             CcccCCCCCCCCcceeeeeccccccccccccCCCceEEEecCCCHHHHHHHHHHhcCC
Confidence            5678999999999999883     233111122 237889999999999999999985

>PF01150 GDA1_CD39: GDA1/CD39 (nucleoside phosphatase) family; InterPro: IPR000407 A number of nucleoside diphosphate and triphosphate hydrolases as well as some yet uncharacterised proteins have been found to belong to the same family [, ] Back     alignment and domain information
>KOG1385 consensus Nucleoside phosphatase [Nucleotide transport and metabolism] Back     alignment and domain information
>COG5371 Golgi nucleoside diphosphatase [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG5371 Golgi nucleoside diphosphatase [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>TIGR03706 exo_poly_only exopolyphosphatase Back     alignment and domain information
>COG0248 GppA Exopolyphosphatase [Nucleotide transport and metabolism / Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK11031 guanosine pentaphosphate phosphohydrolase; Provisional Back     alignment and domain information
>PRK10854 exopolyphosphatase; Provisional Back     alignment and domain information
>PF02541 Ppx-GppA: Ppx/GppA phosphatase family; InterPro: IPR003695 Exopolyphosphate phosphatase (Ppx) 3 Back     alignment and domain information
>PRK15080 ethanolamine utilization protein EutJ; Provisional Back     alignment and domain information
>PRK09472 ftsA cell division protein FtsA; Reviewed Back     alignment and domain information
>TIGR02529 EutJ ethanolamine utilization protein EutJ family protein Back     alignment and domain information
>CHL00094 dnaK heat shock protein 70 Back     alignment and domain information
>PRK05183 hscA chaperone protein HscA; Provisional Back     alignment and domain information
>TIGR01174 ftsA cell division protein FtsA Back     alignment and domain information
>PRK13410 molecular chaperone DnaK; Provisional Back     alignment and domain information
>PRK13411 molecular chaperone DnaK; Provisional Back     alignment and domain information
>PRK10719 eutA reactivating factor for ethanolamine ammonia lyase; Provisional Back     alignment and domain information
>cd00012 ACTIN Actin; An ubiquitous protein involved in the formation of filaments that are a major component of the cytoskeleton Back     alignment and domain information
>TIGR02350 prok_dnaK chaperone protein DnaK Back     alignment and domain information
>smart00268 ACTIN Actin Back     alignment and domain information
>TIGR01991 HscA Fe-S protein assembly chaperone HscA Back     alignment and domain information
>COG0849 ftsA Cell division ATPase FtsA [Cell division and chromosome partitioning] Back     alignment and domain information
>PRK00290 dnaK molecular chaperone DnaK; Provisional Back     alignment and domain information
>PRK13929 rod-share determining protein MreBH; Provisional Back     alignment and domain information
>KOG2517 consensus Ribulose kinase and related carbohydrate kinases [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF06277 EutA: Ethanolamine utilisation protein EutA; InterPro: IPR009377 Proteins in this entry are EutA ethanolamine utilization proteins, reactivating factors for ethanolamine ammonia lyase, encoded by the ethanolamine utilization eut operon Back     alignment and domain information
>PLN03184 chloroplast Hsp70; Provisional Back     alignment and domain information
>PRK01433 hscA chaperone protein HscA; Provisional Back     alignment and domain information
>PF00370 FGGY_N: FGGY family of carbohydrate kinases, N-terminal domain; InterPro: IPR018484 It has been shown [] that four different type of carbohydrate kinases seem to be evolutionary related Back     alignment and domain information
>PTZ00400 DnaK-type molecular chaperone; Provisional Back     alignment and domain information
>PF00022 Actin: Actin; InterPro: IPR004000 Actin [, ] is a ubiquitous protein involved in the formation of filaments that are major components of the cytoskeleton Back     alignment and domain information
>PF06723 MreB_Mbl: MreB/Mbl protein; InterPro: IPR004753 Bacterial cell shape varies greatly between species, and characteristic morphologies are used for identification purposes Back     alignment and domain information
>PF11104 PilM_2: Type IV pilus assembly protein PilM;; PDB: 2YCH_A Back     alignment and domain information
>TIGR00241 CoA_E_activ CoA-substrate-specific enzyme activase, putative Back     alignment and domain information
>PRK13930 rod shape-determining protein MreB; Provisional Back     alignment and domain information
>PTZ00186 heat shock 70 kDa precursor protein; Provisional Back     alignment and domain information
>PTZ00281 actin; Provisional Back     alignment and domain information
>PTZ00004 actin-2; Provisional Back     alignment and domain information
>TIGR01175 pilM type IV pilus assembly protein PilM Back     alignment and domain information
>PRK13927 rod shape-determining protein MreB; Provisional Back     alignment and domain information
>COG4972 PilM Tfp pilus assembly protein, ATPase PilM [Cell motility and secretion / Intracellular trafficking and secretion] Back     alignment and domain information
>PTZ00452 actin; Provisional Back     alignment and domain information
>PTZ00466 actin-like protein; Provisional Back     alignment and domain information
>PF00012 HSP70: Hsp70 protein; InterPro: IPR013126 Heat shock proteins, Hsp70 chaperones help to fold many proteins Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query349
3zx3_A 452 Crystal Structure And Domain Rotation Of Ntpdase1 C 1e-26
3zx0_A 452 Ntpdase1 In Complex With Heptamolybdate Length = 45 3e-26
3cj1_A 456 Structure Of Rattus Norvegicus Ntpdase2 Length = 45 6e-25
3aap_A353 Crystal Structure Of Lp1ntpdase From Legionella Pne 6e-21
4a5b_A 611 Crystal Structure Of The C258sC268S VARIANT OF TOXO 4e-08
4a5a_A 611 Crystal Structure Of The C258sC268S VARIANT OF TOXO 4e-08
4a57_A 611 Crystal Structure Of Toxoplasma Gondii Nucleoside T 5e-08
3agr_A 602 Crystal Structure Of Nucleoside Triphosphate Hydrol 2e-06
>pdb|3ZX3|A Chain A, Crystal Structure And Domain Rotation Of Ntpdase1 Cd39 Length = 452 Back     alignment and structure 
Iteration: 1

 Score =  117 bits (293), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 87/299 (29%), Positives = 137/299 (45%), Gaps = 46/299 (15%)
Query: 75  PSSVKYGVLLDGGSTGTRIHVFSYDTETNHFDFDLGSMRL-------NPGLSSYAVNPTN 127
           P +VKYG++LD GS+ T ++++ +  E  +   D G ++         PG+S YA     
Sbjct: 30  PENVKYGIVLDAGSSHTNLYIYKWPAEKEN---DTGVVQQLEECQVKGPGISKYAQKTDE 86
Query: 128 AGDSLKDLLDFAKRKVPPAFWADTEIRLMATAGLRLVDVVVQ---DKILDSCRRVLRVSG 184
               L + +  +  ++P +    T + L ATAG+RL+ +  +   D++L +  R L+   
Sbjct: 87  IAAYLAECMKMSTERIPASKQHQTPVYLGATAGMRLLRMESKQSADEVLAAVSRSLKSYP 146
Query: 185 FRFADDWATVITGSDEGVYAWIVANYALGTLGGDPSETTGIIELGGASVQVTFVSDEPL- 243
           F F    A +ITG +EG Y WI  NY LG        T G ++LGGAS Q+TFV   PL 
Sbjct: 147 FDFQG--AKIITGQEEGAYGWITINYLLGRFKTPGGSTFGALDLGGASTQITFV---PLN 201
Query: 244 ----PQEFSRTLKFGNVTYNLYSHSFLHFGQNVAFETLRELLSSGDFNTAAESLQ---KG 296
                 E S   +     Y +Y+HSFL +G++ A            +   A+ +Q    G
Sbjct: 202 STLEAPETSLQFRLYGTDYTVYTHSFLCYGKDQAL-----------WQKLAQDIQVSSGG 250
Query: 297 TYIDPCSPKGYLHHVESSP--GSLAAK-------IDLSTLQAGGNFSECRSAALTLLQN 346
              DPC   GY   V  S   G+   K        +   +Q  G++ +C  + L +  N
Sbjct: 251 ILKDPCFYPGYKKVVNVSELYGTPCTKRFEKKLPFNQFQVQGTGDYEQCHQSILKIFNN 309
>pdb|3ZX0|A Chain A, Ntpdase1 In Complex With Heptamolybdate Length = 452 Back     alignment and structure
>pdb|3CJ1|A Chain A, Structure Of Rattus Norvegicus Ntpdase2 Length = 456 Back     alignment and structure
>pdb|3AAP|A Chain A, Crystal Structure Of Lp1ntpdase From Legionella Pneumophila Length = 353 Back     alignment and structure
>pdb|4A5B|A Chain A, Crystal Structure Of The C258sC268S VARIANT OF TOXOPLASMA GONDII Nucleoside Triphosphate Diphosphohydrolase 1 (Ntpdase1) Length = 611 Back     alignment and structure
>pdb|4A5A|A Chain A, Crystal Structure Of The C258sC268S VARIANT OF TOXOPLASMA GONDII Nucleoside Triphosphate Diphosphohydrolase 3 (Ntpdase3) In Complex With Magnesium And Amppnp Length = 611 Back     alignment and structure
>pdb|4A57|A Chain A, Crystal Structure Of Toxoplasma Gondii Nucleoside Triphosphate Diphosphohydrolase 3 (Ntpdase3) Length = 611 Back     alignment and structure
>pdb|3AGR|A Chain A, Crystal Structure Of Nucleoside Triphosphate Hydrolases From Neospora Caninum Length = 602 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query349
3cj1_A 456 Ectonucleoside triphosphate diphosphohydrolase 2; 3e-63
3zx3_A 452 Ectonucleoside triphosphate diphosphohydrolase 1; 1e-62
4a57_A 611 Nucleoside-triphosphatase 1; hydrolase; 2.00A {Tox 4e-59
3aap_A 353 Ectonucleoside triphosphate diphosphohydrolase I; 8e-58
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-06
>3cj1_A Ectonucleoside triphosphate diphosphohydrolase 2; alpha/beta protein, actin-like fold, alternative splicing, calcium, glycoprotein, magnesium; 1.70A {Rattus norvegicus} PDB: 3cj7_A* 3cj9_A* 3cja_A* Length = 456 Back     alignment and structure
 Score =  207 bits (527), Expect = 3e-63
 Identities = 77/294 (26%), Positives = 121/294 (41%), Gaps = 30/294 (10%)

Query: 75  PSSVKYGVLLDGGSTGTRIHVFSYDTETN----HFDFDLGSMRLNPGLSSYAVNPTNAGD 130
           P ++KYG++LD GS+ T + V+ +  +                   G+SSYA +P+ AG 
Sbjct: 30  PPALKYGIVLDAGSSHTSMFVYKWPADKENDTGIVGQHSSCDVQGGGISSYANDPSKAGQ 89

Query: 131 SLKDLLDFAKRKVPPAFWADTEIRLMATAGLRLVDVVVQDKILDSCRRVLRV-SGFRFAD 189
           SL   L+ A R VP    A T + L ATAG+RL+++   +        V +  + + F  
Sbjct: 90  SLVRCLEQALRDVPRDRHASTPLYLGATAGMRLLNLTSPEATARVLEAVTQTLTQYPFDF 149

Query: 190 DWATVITGSDEGVYAWIVANYALGTLG---------GDPSETTGIIELGGASVQVTFVSD 240
             A +++G DEGV+ W+ ANY L                  T G ++LGGAS Q+TF + 
Sbjct: 150 RGARILSGQDEGVFGWVTANYLLENFIKYGWVGRWIRPRKGTLGAMDLGGASTQITFETT 209

Query: 241 EP-LPQEFSRTLKFGNVTYNLYSHSFLHFGQNVAFETLRELLSSGDF-------NTAAES 292
            P         L+     Y +Y+HSFL +G++     L                  + + 
Sbjct: 210 SPSEDPGNEVHLRLYGQHYRVYTHSFLCYGRDQILLRLLASALQIHRFHPCWPKGYSTQV 269

Query: 293 LQKGTYIDPCSPKGYLHHVESSPGSLAAKIDLSTLQAGGNFSECRSAALTLLQN 346
           L +  Y  PC+          S         + +L    N + CR     L   
Sbjct: 270 LLQEVYQSPCTMGQRPRAFNGS--------AIVSLSGTSNATLCRDLVSRLFNI 315
>3zx3_A Ectonucleoside triphosphate diphosphohydrolase 1; domain rotation, purinergic signaling; 1.70A {Rattus norvegicus} PDB: 3zx2_A* 3zx0_A* Length = 452 Back     alignment and structure
>4a57_A Nucleoside-triphosphatase 1; hydrolase; 2.00A {Toxoplasma gondii} PDB: 4a59_A* 4a5a_A* 4a5b_A 3agr_A Length = 611 Back     alignment and structure
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A* Length = 353 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query349
3zx3_A 452 Ectonucleoside triphosphate diphosphohydrolase 1; 100.0
3cj1_A 456 Ectonucleoside triphosphate diphosphohydrolase 2; 100.0
4a57_A 611 Nucleoside-triphosphatase 1; hydrolase; 2.00A {Tox 100.0
3aap_A 353 Ectonucleoside triphosphate diphosphohydrolase I; 100.0
1t6c_A315 Exopolyphosphatase; alpha/beta protein, actin-like 99.88
3cer_A343 Possible exopolyphosphatase-like protein; NESG, BL 99.87
3mdq_A315 Exopolyphosphatase; structural genomics, joint cen 99.84
3hi0_A 508 Putative exopolyphosphatase; 17739545, structural 99.8
1u6z_A 513 Exopolyphosphatase; alpha/beta protein, askha (ace 99.79
3h1q_A272 Ethanolamine utilization protein EUTJ; ethanolamin 98.42
3qfu_A394 78 kDa glucose-regulated protein homolog; HSP70, K 96.1
2ych_A377 Competence protein PILM; cell cycle, type IV pilus 95.83
4gni_A409 Putative heat shock protein; HSP70-type ATPase, AT 95.52
4b9q_A 605 Chaperone protein DNAK; HET: ATP; 2.40A {Escherich 94.98
3i33_A404 Heat shock-related 70 kDa protein 2; protein-ADP c 94.71
4a2a_A 419 Cell division protein FTSA, putative; cell cycle, 94.43
2v7y_A 509 Chaperone protein DNAK; HSP70, heat shock protein, 93.59
2fxu_A375 Alpha-actin-1, actin, alpha skeletal muscle; actin 91.99
1yuw_A 554 Heat shock cognate 71 kDa protein; chaperone; 2.60 91.09
3qb0_A 498 Actin-related protein 4; actin fold, ATP binding, 89.57
2kho_A 605 Heat shock protein 70; molecular chaperone, HSP70, 88.8
1k8k_A 418 ARP3, actin-like protein 3, actin-2; beta-propelle 87.95
4ehu_A276 Activator of 2-hydroxyisocaproyl-COA dehydratase; 87.92
1hux_A270 Activator of (R)-2-hydroxyglutaryl-COA dehydratase 85.26
>3zx3_A Ectonucleoside triphosphate diphosphohydrolase 1; domain rotation, purinergic signaling; 1.70A {Rattus norvegicus} PDB: 3zx2_A* 3zx0_A* Back     alignment and structure
Probab=100.00  E-value=7.3e-65  Score=510.74  Aligned_cols=267  Identities=30%  Similarity=0.534  Sum_probs=224.8

Q ss_pred             CCCCCCCCceEEEEEEcCCCceEEEEEEeeCCC----CccccccceeecC-CCCcccCCCcchHHHHHHHHHHHHHHhCC
Q 018849           70 KPSFPPSSVKYGVLLDGGSTGTRIHVFSYDTET----NHFDFDLGSMRLN-PGLSSYAVNPTNAGDSLKDLLDFAKRKVP  144 (349)
Q Consensus        70 ~~~~~~~~~~y~vVIDaGSsgtRl~Vy~~~~~~----~~~~~~~~~~k~~-pGLss~~~~~~~a~~~l~~Ll~~a~~~ip  144 (349)
                      +..+.+...+|+|||||||||||||||+|+.++    +.+. +...+|+. ||||+|+++|+++.++|++|+++|++.||
T Consensus        25 ~~~~~~~~~~y~iviDaGSsgtRl~VY~~~~~~~~~~~~~~-~~~~~k~~gpGlSs~~~~p~~~~~~l~~Ll~~a~~~vp  103 (452)
T 3zx3_A           25 HNKPLPENVKYGIVLDAGSSHTNLYIYKWPAEKENDTGVVQ-QLEECQVKGPGISKYAQKTDEIAAYLAECMKMSTERIP  103 (452)
T ss_dssp             -------CEEEEEEEEECSSCEEEEEEEEECCCTTCCCCCE-EEEEEECSSSCGGGGTTCGGGHHHHHHHHHHHHHHHSC
T ss_pred             ccccCCCCceEEEEEEcCCCCcEEEEEEEeCCcCCCccccc-eeeeecccCCChhccCCCHHHHHHHHHHHHHHHHHhCC
Confidence            345566788999999999999999999998632    1222 45568885 99999999999999999999999999999


Q ss_pred             CCCcCCceEEEEeehhhcccCh---hcHHHHHHHHHHHhhccCccccCCceEEcCCccchhhHHHHHHHhhccCCCCCCC
Q 018849          145 PAFWADTEIRLMATAGLRLVDV---VVQDKILDSCRRVLRVSGFRFADDWATVITGSDEGVYAWIVANYALGTLGGDPSE  221 (349)
Q Consensus       145 ~~~~~~tpv~l~ATAGmR~L~~---~~~~~il~~vr~~l~~~~f~f~~~~v~VIsG~eEg~y~WvavNy~lg~l~~~~~~  221 (349)
                      .+.|+.|||+++||||||+|+.   +++++||++|++.+++++|.|.  +|+||||+|||+|+|+|+||++|+|..+..+
T Consensus       104 ~~~~~~tpi~~~ATAgmR~l~~~~~~~~~~il~~v~~~l~~~~f~~~--~v~iisG~eEg~y~wi~vnyllg~l~~~~~~  181 (452)
T 3zx3_A          104 ASKQHQTPVYLGATAGMRLLRMESKQSADEVLAAVSRSLKSYPFDFQ--GAKIITGQEEGAYGWITINYLLGRFKTPGGS  181 (452)
T ss_dssp             HHHHTTCEEEEEECHHHHHHHHHCHHHHHHHHHHHHHHHHTSSSEEE--EEEECCHHHHHHHHHHHHHHHTTTTC---CC
T ss_pred             HHHcCCccEEEEeeHHHhhccccCHHHHHHHHHHHHHHHhhCCCCCC--ceEECCchhhhhhhHHHHHhhhccccCCCCC
Confidence            9999999999999999999984   4789999999999998899886  4999999999999999999999998765457


Q ss_pred             ceeeEeeCCceeEEEeccCCC--CCccceeeeEecceeEEEEEeecccccHHHHHHHHHHHhccCCcchhhhhcCCCCcC
Q 018849          222 TTGIIELGGASVQVTFVSDEP--LPQEFSRTLKFGNVTYNLYSHSFLHFGQNVAFETLRELLSSGDFNTAAESLQKGTYI  299 (349)
Q Consensus       222 t~gvlDlGGaStQI~f~~~~~--~~~~~~~~~~l~~~~~~lys~S~Lg~G~~~ar~~~~~~l~~~~~~~~~~~~~~~~~~  299 (349)
                      |+|+||||||||||+|.+++.  ..+++...++++|++|+||+|||||||+|+||+++++.+.+.        ..++.+.
T Consensus       182 t~g~lDlGGgStQi~f~~~~~~~~~~~~~~~l~l~g~~y~lYthSyLgyG~~~Ar~r~l~~l~~~--------~~~~~~~  253 (452)
T 3zx3_A          182 TFGALDLGGASTQITFVPLNSTLEAPETSLQFRLYGTDYTVYTHSFLCYGKDQALWQKLAQDIQV--------SSGGILK  253 (452)
T ss_dssp             CCEEEEECSSEEEEEECCSSCCSSSGGGEEEEEETTEEEEEEEEEEETCSHHHHHHHHHHHHCCT--------TSSSEEE
T ss_pred             ceEEEecCCCceEEEeccCCCccCCCCceEEEEECCEEEEEEEEehhhccHHHHHHHHHHHHhcc--------cCCCccc
Confidence            899999999999999998765  345677889999999999999999999999999999998762        1335688


Q ss_pred             CCCCCCCceeeee-----cCCCccccc----cceeeeecCCCHHhHHHHHHHHHhcC
Q 018849          300 DPCSPKGYLHHVE-----SSPGSLAAK----IDLSTLQAGGNFSECRSAALTLLQNG  347 (349)
Q Consensus       300 ~PC~p~Gy~~~~~-----~~~~~~~~~----~~~~~~~GtGnf~~C~~~v~~lL~~~  347 (349)
                      |||+|+||+..++     .++|+...+    .+.+++.|+|||++|++.|+++|++.
T Consensus       254 ~PC~p~Gy~~~~~~~~~~~spc~~~~~~~~~~~~~~~~Gtg~~~~C~~~v~~ll~~~  310 (452)
T 3zx3_A          254 DPCFYPGYKKVVNVSELYGTPCTKRFEKKLPFNQFQVQGTGDYEQCHQSILKIFNNS  310 (452)
T ss_dssp             ETTSCTTCEEEEEHHHHTTSGGGGGGCCCCSCSEEEEEECCCHHHHHHHHHTTSCCS
T ss_pred             CCCCCCCCeeEEeecccccccccccccccCCCceeEEeccCCHHHHHHHHHHHhccC
Confidence            9999999999887     345654321    23488999999999999999999863
>3cj1_A Ectonucleoside triphosphate diphosphohydrolase 2; alpha/beta protein, actin-like fold, alternative splicing, calcium, glycoprotein, magnesium; 1.70A {Rattus norvegicus} PDB: 3cj7_A* 3cj9_A* 3cja_A* Back     alignment and structure
>4a57_A Nucleoside-triphosphatase 1; hydrolase; 2.00A {Toxoplasma gondii} PDB: 4a59_A* 4a5a_A* 4a5b_A 3agr_A Back     alignment and structure
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A* Back     alignment and structure
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A* Back     alignment and structure
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705} Back     alignment and structure
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii} Back     alignment and structure
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str} Back     alignment and structure
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A* Back     alignment and structure
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid} Back     alignment and structure
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus} Back     alignment and structure
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var} Back     alignment and structure
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D Back     alignment and structure
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ... Back     alignment and structure
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A* Back     alignment and structure
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426} Back     alignment and structure
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ... Back     alignment and structure
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A* Back     alignment and structure
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae} Back     alignment and structure
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli} Back     alignment and structure
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A Back     alignment and structure
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A Back     alignment and structure
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5 Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query349
d1t6ca1126 Exopolyphosphatase Ppx {Aquifex aeolicus [TaxId: 6 99.63
d1u6za2124 Exopolyphosphatase Ppx {Escherichia coli [TaxId: 5 99.62
d1t6ca2180 Exopolyphosphatase Ppx {Aquifex aeolicus [TaxId: 6 94.86
d1u6za3177 Exopolyphosphatase Ppx {Escherichia coli [TaxId: 5 93.61
d1zc6a1114 Probable N-acetylglucosamine kinase CV2896 {Chromo 92.36
d1zbsa2107 Hypothetical protein PG1100 {Porphyromonas gingiva 91.31
d2p3ra1252 Glycerol kinase {Escherichia coli [TaxId: 562]} 91.02
d2ch5a2117 N-acetylglucosamine kinase, NAGK {Human (Homo sapi 90.43
d1e4ft1193 Cell division protein FtsA {Thermotoga maritima [T 87.25
d1bupa2193 Heat shock protein 70kDa, ATPase fragment {Cow (Bo 84.36
d1r59o1252 Glycerol kinase {Enterococcus casseliflavus [TaxId 82.01
>d1t6ca1 c.55.1.8 (A:7-132) Exopolyphosphatase Ppx {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Ppx/GppA phosphatase
domain: Exopolyphosphatase Ppx
species: Aquifex aeolicus [TaxId: 63363]

Probab=99.63  E-value=4.5e-16  Score=129.18  Aligned_cols=119  Identities=18%  Similarity=0.256  Sum_probs=83.8

Q ss_pred             EEEEEcCCCceEEEEEEeeCCCCc-cccccceeecCCCCcccCC-CcchHHHHHHHHHHHHHHhCCCCCcCCceEEEEee
Q 018849           81 GVLLDGGSTGTRIHVFSYDTETNH-FDFDLGSMRLNPGLSSYAV-NPTNAGDSLKDLLDFAKRKVPPAFWADTEIRLMAT  158 (349)
Q Consensus        81 ~vVIDaGSsgtRl~Vy~~~~~~~~-~~~~~~~~k~~pGLss~~~-~~~~a~~~l~~Ll~~a~~~ip~~~~~~tpv~l~AT  158 (349)
                      .+|||+|||++|+.||+...+... +.......++..++..-.. .++.+.+.++.|.+|.+..   +.++.+.+.++||
T Consensus         5 iavIDIGSNsirl~I~~~~~~~~~~l~~~~~~~~Lg~~~~~~g~ls~~~i~~~~~~l~~f~~~~---~~~~v~~~~~vaT   81 (126)
T d1t6ca1           5 VASIDIGSYSVRLTIAQIKDGKLSIILERGRITSLGTKVKETGRLQEDRIEETIQVLKEYKKLI---DEFKVERVKAVAT   81 (126)
T ss_dssp             EEEEEECSSEEEEEEEEEETTEEEEEEEEEEECCTTTTHHHHSSCCHHHHHHHHHHHHHHHHHH---HHTTCSEEEEEEC
T ss_pred             EEEEEEccceEEEEEEEecCCcceeeeeeeEEEEcccCccccCCCCHHHHHHHHHHHHHHHHHH---HhcCccceEEehh
Confidence            459999999999999998753321 1101112333333332222 3455555555555554433   3456789999999


Q ss_pred             hhhcccChhcHHHHHHHHHHHhhccCccccCCceEEcCCccchhhHHHHHHHhh
Q 018849          159 AGLRLVDVVVQDKILDSCRRVLRVSGFRFADDWATVITGSDEGVYAWIVANYAL  212 (349)
Q Consensus       159 AGmR~L~~~~~~~il~~vr~~l~~~~f~f~~~~v~VIsG~eEg~y~WvavNy~l  212 (349)
                      ++||.  +.|+++|++.+++.+   |++     ++||||+|||.|+|+|+-..+
T Consensus        82 sA~R~--A~N~~~~~~~i~~~t---gi~-----i~Iisg~eEa~l~~~gv~~~l  125 (126)
T d1t6ca1          82 EAIRR--AKNAEEFLERVKREV---GLV-----VEVITPEQEGRYAYLAVAYSL  125 (126)
T ss_dssp             HHHHT--STTHHHHHHHHHHHT---CCC-----EEECCHHHHHHHHHHHHHHHT
T ss_pred             HHHHh--CcCHHHHHHHHHHHH---CCC-----eEEeCHHHHHHHHHHHHHHhc
Confidence            99999  579999999999965   775     999999999999999997654
>d1u6za2 c.55.1.8 (A:12-135) Exopolyphosphatase Ppx {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1t6ca2 c.55.1.8 (A:133-312) Exopolyphosphatase Ppx {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d1u6za3 c.55.1.8 (A:136-312) Exopolyphosphatase Ppx {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1zc6a1 c.55.1.5 (A:8-121) Probable N-acetylglucosamine kinase CV2896 {Chromobacterium violaceum [TaxId: 536]} Back     information, alignment and structure
>d1zbsa2 c.55.1.5 (A:1-107) Hypothetical protein PG1100 {Porphyromonas gingivalis [TaxId: 837]} Back     information, alignment and structure
>d2ch5a2 c.55.1.5 (A:1-117) N-acetylglucosamine kinase, NAGK {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1e4ft1 c.55.1.1 (T:7-199) Cell division protein FtsA {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1bupa2 c.55.1.1 (A:189-381) Heat shock protein 70kDa, ATPase fragment {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1r59o1 c.55.1.4 (O:5-256) Glycerol kinase {Enterococcus casseliflavus [TaxId: 37734]} Back     information, alignment and structure