Citrus Sinensis ID: 018857

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------35
MAGGSDAAETTSLSCVRCGKPAHLQCPKCMELKLPREGAAFCTQDCFKASWTSHKSVHLKAKLSAPGTGENSSLVSEGWRYCIKKGQARTPKLPHFDWTGTLRPYPISSKLTVPAYIELPDWALDGTPKVEPNSDLQHVVEIKTPDQIERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVICHGIPDSRKLEDGDIVNIDVTVYYKGVHGDLNETYFVGNADEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHATMSGFSVVKSYCGHGIGELFHCAPNIPHYSSLYHAFQPHIFYIQKSFYFMDNGQLLR
cccccccccccccccccccccccccccccccccccccccEEEcHHHHcccHHHHHHHHHHccccccccccccccccccccHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEccHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHcccccccccccccccccccccccEEEcccccccccccccEEEEEEEEEEcccccccccEEEcccccHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHcccEEEcccccccccccccccccccccccccccccccEEEccccccccccccccc
ccccccccccccccccccccccccccccHHHccccccccEEccHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccEHHHHHHHHHHHHHHcccccccccHHHcccccEEEEccEEEcccccccEcccccEEEEEEEEEEccEEEEEEEEEEcccccHHHHHHHHHHHHHHHHHHHHcccccEHHHHHHHHHHHHHHcccEEcccccEEEccccccEEEEEccccccEEEEccEEccccccccccccccccc
maggsdaaettslscvrcgkpahlqcpkcmelklpregaafctqdcfkaswtshksVHLKAklsapgtgensslvSEGWRYCIkkgqartpklphfdwtgtlrpypisskltvpayielpdwaldgtpkvepnsdlqhvveiktPDQIERMRETCRIAREVLDAAARmirpgvttdeIDRVVHEAtitaggypsplnyhffpkscctsvnevichgipdsrkledgdivnIDVTVYYkgvhgdlnetyfvgnadEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHATMSGFSVVKSYCghgigelfhcapniphysslyhafqPHIFYIQKSFYFMDNGQLLR
maggsdaaettslscvrcgkPAHLQCPKCMELKLPREGAAFCTQDCFKASWTSHKSVHLKaklsapgtgensslvSEGWRYCIKKGqartpklphfdwtGTLRPYPISSKLTVPAYIELPDWALDGTpkvepnsdlqhvveiktpdqieRMRETCRIAREVLdaaarmirpgvttdeidrVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVICHGIpdsrkledgdiVNIDVTVYYKGVHGDLNETYFVGNADEASRQLVQCTYECLEKAisivkpgvrFREIGEVINRHATMSGFSVVKSYCGHGIGELFHCAPNIPHYSSLYHAFQPHIFYIQKSFYFMDNGQLLR
MAGGSDAAETTSLSCVRCGKPAHLQCPKCMELKLPREGAAFCTQDCFKASWTSHKSVHLKAKLSAPGTGENSSLVSEGWRYCIKKGQARTPKLPHFDWTGTLRPYPISSKLTVPAYIELPDWALDGTPKVEPNSDLQHVVEIKTPDQIERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVICHGIPDSRKLEDGDIVNIDVTVYYKGVHGDLNETYFVGNADEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHATMSGFSVVKSYCGHGIGELFHCAPNIPHYSSLYHAFQPHIFYIQKSFYFMDNGQLLR
************LSCVRCGKPAHLQCPKCMELKLPREGAAFCTQDCFKASWTSHKSVHLKA************LVSEGWRYCIKKGQARTPKLPHFDWTGTLRPYPISSKLTVPAYIELPDWALDGTPKV*****LQHVVEIKTPDQIERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVICHGIPDSRKLEDGDIVNIDVTVYYKGVHGDLNETYFVGNADEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHATMSGFSVVKSYCGHGIGELFHCAPNIPHYSSLYHAFQPHIFYIQKSFYFMDN*****
*******************KPAHLQCPKCMELKLPREGAAFCTQDCFKASWTSHKSV***********************YCIKKGQARTPKLPHFDWTGTLRPYPISSKLTVPAYIELPDWALDG****************KTPDQIERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVICHGIPDSRKLEDGDIVNIDVTVYYKGVHGDLNETYFVGNADEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHATMSGFSVVKSYCGHGIGELFHCAPNIPHYSSLYHAFQPHIFYIQKSFYFMDNGQLLR
************LSCVRCGKPAHLQCPKCMELKLPREGAAFCTQDCFKASW************************SEGWRYCIKKGQARTPKLPHFDWTGTLRPYPISSKLTVPAYIELPDWALDGTPKVEPNSDLQHVVEIKTPDQIERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVICHGIPDSRKLEDGDIVNIDVTVYYKGVHGDLNETYFVGNADEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHATMSGFSVVKSYCGHGIGELFHCAPNIPHYSSLYHAFQPHIFYIQKSFYFMDNGQLLR
************LSCVRCGKPAHLQCPKCMELKLPREGAAFCTQDCFKASWTSHKSVHLKA*****************WRYCIKKGQARTPKLPHFDWTGTLRPYPISSKLTVPAYIELPDWALDGTPKVEPN*DLQHVVEIKTPDQIERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVICHGIPDSRKLEDGDIVNIDVTVYYKGVHGDLNETYFVGNADEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHATMSGFSVVKSYCGHGIGELFHCAPNIPHYSSLYHAFQPHIFYIQKSFYFMDNGQLLR
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MAGGSDAAETTSLSCVRCGKPAHLQCPKCMELKLPREGAAFCTQDCFKASWTSHKSVHLKAKLSAPGTGENSSLVSEGWRYCIKKGQARTPKLPHFDWTGTLRPYPISSKLTVPAYIELPDWALDGTPKVEPNSDLQHVVEIKTPDQIERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVICHGIPDSRKLEDGDIVNIDVTVYYKGVHGDLNETYFVGNADEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHATMSGFSVVKSYCGHGIGELFHCAPNIPHYSSLYHAFQPHIFYIQKSFYFMDNGQLLR
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query349 2.2.26 [Sep-21-2011]
Q9SLN5398 Methionine aminopeptidase yes no 0.919 0.806 0.822 1e-162
Q5ZIM5385 Methionine aminopeptidase yes no 0.914 0.828 0.514 4e-90
A6QLA4386 Methionine aminopeptidase yes no 0.873 0.790 0.529 9e-90
P53582386 Methionine aminopeptidase yes no 0.873 0.790 0.526 2e-89
Q4QRK0386 Methionine aminopeptidase yes no 0.911 0.823 0.5 3e-89
Q5RBF3386 Methionine aminopeptidase yes no 0.873 0.790 0.526 3e-89
Q8BP48386 Methionine aminopeptidase yes no 0.873 0.790 0.526 1e-88
Q7ZWV9385 Methionine aminopeptidase N/A no 0.914 0.828 0.5 1e-88
Q5I0A0385 Methionine aminopeptidase yes no 0.914 0.828 0.5 1e-87
Q54WU3367 Methionine aminopeptidase yes no 0.805 0.765 0.5 1e-84
>sp|Q9SLN5|AMP1A_ARATH Methionine aminopeptidase 1A OS=Arabidopsis thaliana GN=MAP1A PE=2 SV=1 Back     alignment and function desciption
 Score =  572 bits (1475), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 265/322 (82%), Positives = 297/322 (92%), Gaps = 1/322 (0%)

Query: 1   MAGGSDAAETTSLSCVRCGKPAHLQCPKCMELKLPREGAAFCTQDCFKASWTSHKSVHLK 60
           MA  SDA+   +LSC RC KPAHLQCPKC++LKLPRE A+FCTQ+CFKA+W+SHKSVH+K
Sbjct: 1   MASESDASSIATLSCARCEKPAHLQCPKCIDLKLPREQASFCTQECFKAAWSSHKSVHVK 60

Query: 61  AKLSAPGTGENSSLVSEGWRYCIKKGQARTPKLPHFDWTGTLRPYPISSKLTVPAYIELP 120
           A+LS+ G  +NS L+S+GW YC+KKGQARTPKLPHFDWTG L+ YPIS+K  VPA IE P
Sbjct: 61  AQLSSIG-DQNSDLISQGWLYCVKKGQARTPKLPHFDWTGPLKQYPISTKRVVPAEIEKP 119

Query: 121 DWALDGTPKVEPNSDLQHVVEIKTPDQIERMRETCRIAREVLDAAARMIRPGVTTDEIDR 180
           DWA+DGTPKVEPNSDLQHVVEIKTP+QI+RMRETC+IAREVLDAAAR+I PGVTTDEIDR
Sbjct: 120 DWAIDGTPKVEPNSDLQHVVEIKTPEQIQRMRETCKIAREVLDAAARVIHPGVTTDEIDR 179

Query: 181 VVHEATITAGGYPSPLNYHFFPKSCCTSVNEVICHGIPDSRKLEDGDIVNIDVTVYYKGV 240
           VVHEATI AGGYPSPLNY+FFPKSCCTSVNEVICHGIPD+RKLEDGDIVN+DVTV YKG 
Sbjct: 180 VVHEATIAAGGYPSPLNYYFFPKSCCTSVNEVICHGIPDARKLEDGDIVNVDVTVCYKGC 239

Query: 241 HGDLNETYFVGNADEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHATMSGFSVV 300
           HGDLNETYFVGN DEASRQLV+CTYECLEKAI+IVKPGVRFREIGE++NRHATMSG SVV
Sbjct: 240 HGDLNETYFVGNVDEASRQLVKCTYECLEKAIAIVKPGVRFREIGEIVNRHATMSGLSVV 299

Query: 301 KSYCGHGIGELFHCAPNIPHYS 322
           +SYCGHGIG+LFHCAPNIPHY+
Sbjct: 300 RSYCGHGIGDLFHCAPNIPHYA 321
Removes the N-terminal methionine from nascent proteins.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 4EC: .EC: 1EC: 1EC: .EC: 1EC: 8
>sp|Q5ZIM5|AMPM1_CHICK Methionine aminopeptidase 1 OS=Gallus gallus GN=METAP1 PE=2 SV=1 Back     alignment and function description
>sp|A6QLA4|AMPM1_BOVIN Methionine aminopeptidase 1 OS=Bos taurus GN=METAP1 PE=2 SV=1 Back     alignment and function description
>sp|P53582|AMPM1_HUMAN Methionine aminopeptidase 1 OS=Homo sapiens GN=METAP1 PE=1 SV=2 Back     alignment and function description
>sp|Q4QRK0|AMPM1_DANRE Methionine aminopeptidase 1 OS=Danio rerio GN=metap1 PE=2 SV=2 Back     alignment and function description
>sp|Q5RBF3|AMPM1_PONAB Methionine aminopeptidase 1 OS=Pongo abelii GN=METAP1 PE=2 SV=1 Back     alignment and function description
>sp|Q8BP48|AMPM1_MOUSE Methionine aminopeptidase 1 OS=Mus musculus GN=Metap1 PE=2 SV=1 Back     alignment and function description
>sp|Q7ZWV9|AMPM1_XENLA Methionine aminopeptidase 1 OS=Xenopus laevis GN=metap1 PE=2 SV=2 Back     alignment and function description
>sp|Q5I0A0|AMPM1_XENTR Methionine aminopeptidase 1 OS=Xenopus tropicalis GN=metap1 PE=2 SV=1 Back     alignment and function description
>sp|Q54WU3|AMPM1_DICDI Methionine aminopeptidase 1 OS=Dictyostelium discoideum GN=metap1 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query349
255541234397 methionine aminopeptidase, putative [Ric 0.914 0.803 0.850 1e-166
356506316397 PREDICTED: methionine aminopeptidase 1A- 0.916 0.806 0.860 1e-165
356496352397 PREDICTED: methionine aminopeptidase 1A- 0.916 0.806 0.857 1e-164
225453987398 PREDICTED: methionine aminopeptidase 1A 0.902 0.791 0.865 1e-164
449432281402 PREDICTED: methionine aminopeptidase 1A- 0.919 0.798 0.824 1e-163
224127342396 predicted protein [Populus trichocarpa] 0.905 0.797 0.842 1e-161
297824569401 hypothetical protein ARALYDRAFT_903964 [ 0.922 0.802 0.827 1e-161
15225437398 methionine aminopeptidase 1A [Arabidopsi 0.919 0.806 0.822 1e-161
21593270398 putative methionine aminopeptidase [Arab 0.919 0.806 0.822 1e-160
388498902397 unknown [Medicago truncatula] 0.914 0.803 0.825 1e-158
>gi|255541234|ref|XP_002511681.1| methionine aminopeptidase, putative [Ricinus communis] gi|223548861|gb|EEF50350.1| methionine aminopeptidase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  589 bits (1519), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 273/321 (85%), Positives = 300/321 (93%), Gaps = 2/321 (0%)

Query: 1   MAGGSDAAETTSLSCVRCGKPAHLQCPKCMELKLPREGAAFCTQDCFKASWTSHKSVHLK 60
           MAGGS+AAE T L C RC KPAHLQCPKCMELKLPREGAAFCTQDCFKASW++HKSVH+K
Sbjct: 1   MAGGSEAAEATPLLCARCEKPAHLQCPKCMELKLPREGAAFCTQDCFKASWSTHKSVHVK 60

Query: 61  AKLSAPGTGENSSLVSEGWRYCIKKGQARTPKLPHFDWTGTLRPYPISSKLTVPAYIELP 120
           AKLS+    +NS L +EGWRYC+++GQ RTPKLP+FDWTGTLRPYPIS    VPA+I+ P
Sbjct: 61  AKLSS--IEQNSDLSNEGWRYCLRRGQDRTPKLPYFDWTGTLRPYPISPYRVVPAHIDKP 118

Query: 121 DWALDGTPKVEPNSDLQHVVEIKTPDQIERMRETCRIAREVLDAAARMIRPGVTTDEIDR 180
           DWA+DG PK+EPNSDLQHVVEIKT DQI+RMRETCRI+REVLDAAAR+IRPG+TTDE+DR
Sbjct: 119 DWAVDGIPKIEPNSDLQHVVEIKTTDQIQRMRETCRISREVLDAAARVIRPGITTDEVDR 178

Query: 181 VVHEATITAGGYPSPLNYHFFPKSCCTSVNEVICHGIPDSRKLEDGDIVNIDVTVYYKGV 240
           VVHEATI+AGGYPSPLNYHFFPKSCCTSVNEVICHGIPD+RKLEDGDIVN+DV+VYYKGV
Sbjct: 179 VVHEATISAGGYPSPLNYHFFPKSCCTSVNEVICHGIPDARKLEDGDIVNVDVSVYYKGV 238

Query: 241 HGDLNETYFVGNADEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHATMSGFSVV 300
           HGDLNET+FVGN DEASRQLVQCTYECLEKAISIVKPGVRFRE+GEVINRHATMSG SVV
Sbjct: 239 HGDLNETFFVGNVDEASRQLVQCTYECLEKAISIVKPGVRFREVGEVINRHATMSGLSVV 298

Query: 301 KSYCGHGIGELFHCAPNIPHY 321
           KSYCGHGIG+LFHCAPNIPHY
Sbjct: 299 KSYCGHGIGDLFHCAPNIPHY 319

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|356506316|ref|XP_003521931.1| PREDICTED: methionine aminopeptidase 1A-like [Glycine max] Back     alignment and taxonomy information
>gi|356496352|ref|XP_003517032.1| PREDICTED: methionine aminopeptidase 1A-like [Glycine max] Back     alignment and taxonomy information
>gi|225453987|ref|XP_002274528.1| PREDICTED: methionine aminopeptidase 1A [Vitis vinifera] gi|296089187|emb|CBI38890.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|449432281|ref|XP_004133928.1| PREDICTED: methionine aminopeptidase 1A-like [Cucumis sativus] gi|449528877|ref|XP_004171428.1| PREDICTED: methionine aminopeptidase 1A-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|224127342|ref|XP_002320050.1| predicted protein [Populus trichocarpa] gi|222860823|gb|EEE98365.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|297824569|ref|XP_002880167.1| hypothetical protein ARALYDRAFT_903964 [Arabidopsis lyrata subsp. lyrata] gi|297326006|gb|EFH56426.1| hypothetical protein ARALYDRAFT_903964 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|15225437|ref|NP_182049.1| methionine aminopeptidase 1A [Arabidopsis thaliana] gi|12229672|sp|Q9SLN5.1|AMP1A_ARATH RecName: Full=Methionine aminopeptidase 1A; Short=MAP 1A; Short=MetAP 1A; AltName: Full=Peptidase M 1A gi|11320954|gb|AAG33974.1|AF250960_1 methionine aminopeptidase-like protein [Arabidopsis thaliana] gi|2583129|gb|AAB82638.1| putative methionine aminopeptidase [Arabidopsis thaliana] gi|20466153|gb|AAM20394.1| putative methionine aminopeptidase [Arabidopsis thaliana] gi|30725654|gb|AAP37849.1| At2g45240 [Arabidopsis thaliana] gi|110742696|dbj|BAE99259.1| putative methionine aminopeptidase [Arabidopsis thaliana] gi|330255434|gb|AEC10528.1| methionine aminopeptidase 1A [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|21593270|gb|AAM65219.1| putative methionine aminopeptidase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|388498902|gb|AFK37517.1| unknown [Medicago truncatula] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query349
TAIR|locus:2050916398 MAP1A "methionine aminopeptida 0.919 0.806 0.822 3.2e-152
UNIPROTKB|Q5ZIM5385 METAP1 "Methionine aminopeptid 0.914 0.828 0.514 6e-87
ZFIN|ZDB-GENE-050626-124405 metap1 "methionyl aminopeptida 0.911 0.785 0.502 3.3e-86
UNIPROTKB|A6QLA4386 METAP1 "Methionine aminopeptid 0.873 0.790 0.529 5.4e-86
UNIPROTKB|F1S0C0386 METAP1 "Methionine aminopeptid 0.873 0.790 0.529 5.4e-86
UNIPROTKB|F1NI90379 METAP1 "Methionine aminopeptid 0.882 0.812 0.52 1.1e-85
UNIPROTKB|P53582386 METAP1 "Methionine aminopeptid 0.873 0.790 0.526 1.1e-85
MGI|MGI:1922874386 Metap1 "methionyl aminopeptida 0.873 0.790 0.526 8e-85
RGD|1305545386 Metap1 "methionyl aminopeptida 0.873 0.790 0.523 1e-84
WB|WBGene00003129371 map-1 [Caenorhabditis elegans 0.656 0.617 0.581 4.5e-84
TAIR|locus:2050916 MAP1A "methionine aminopeptidase 1A" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1485 (527.8 bits), Expect = 3.2e-152, P = 3.2e-152
 Identities = 265/322 (82%), Positives = 297/322 (92%)

Query:     1 MAGGSDAAETTSLSCVRCGKPAHLQCPKCMELKLPREGAAFCTQDCFKASWTSHKSVHLK 60
             MA  SDA+   +LSC RC KPAHLQCPKC++LKLPRE A+FCTQ+CFKA+W+SHKSVH+K
Sbjct:     1 MASESDASSIATLSCARCEKPAHLQCPKCIDLKLPREQASFCTQECFKAAWSSHKSVHVK 60

Query:    61 AKLSAPGTGENSSLVSEGWRYCIKKGQARTPKLPHFDWTGTLRPYPISSKLTVPAYIELP 120
             A+LS+ G  +NS L+S+GW YC+KKGQARTPKLPHFDWTG L+ YPIS+K  VPA IE P
Sbjct:    61 AQLSSIGD-QNSDLISQGWLYCVKKGQARTPKLPHFDWTGPLKQYPISTKRVVPAEIEKP 119

Query:   121 DWALDGTPKVEPNSDLQHVVEIKTPDQIERMRETCRIAREVLDAAARMIRPGVTTDEIDR 180
             DWA+DGTPKVEPNSDLQHVVEIKTP+QI+RMRETC+IAREVLDAAAR+I PGVTTDEIDR
Sbjct:   120 DWAIDGTPKVEPNSDLQHVVEIKTPEQIQRMRETCKIAREVLDAAARVIHPGVTTDEIDR 179

Query:   181 VVHEATITAGGYPSPLNYHFFPKSCCTSVNEVICHGIPDSRKLEDGDIVNIDVTVYYKGV 240
             VVHEATI AGGYPSPLNY+FFPKSCCTSVNEVICHGIPD+RKLEDGDIVN+DVTV YKG 
Sbjct:   180 VVHEATIAAGGYPSPLNYYFFPKSCCTSVNEVICHGIPDARKLEDGDIVNVDVTVCYKGC 239

Query:   241 HGDLNETYFVGNADEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHATMSGFSVV 300
             HGDLNETYFVGN DEASRQLV+CTYECLEKAI+IVKPGVRFREIGE++NRHATMSG SVV
Sbjct:   240 HGDLNETYFVGNVDEASRQLVKCTYECLEKAIAIVKPGVRFREIGEIVNRHATMSGLSVV 299

Query:   301 KSYCGHGIGELFHCAPNIPHYS 322
             +SYCGHGIG+LFHCAPNIPHY+
Sbjct:   300 RSYCGHGIGDLFHCAPNIPHYA 321
GO:0004177 "aminopeptidase activity" evidence=IEA
GO:0005737 "cytoplasm" evidence=ISM;IDA
GO:0006508 "proteolysis" evidence=IEA
GO:0008235 "metalloexopeptidase activity" evidence=IEA
GO:0008270 "zinc ion binding" evidence=IEA
GO:0009987 "cellular process" evidence=IEA
GO:0016485 "protein processing" evidence=NAS
GO:0031365 "N-terminal protein amino acid modification" evidence=TAS
GO:0005829 "cytosol" evidence=IDA
GO:0010048 "vernalization response" evidence=RCA
GO:0043481 "anthocyanin accumulation in tissues in response to UV light" evidence=RCA
GO:0048440 "carpel development" evidence=RCA
UNIPROTKB|Q5ZIM5 METAP1 "Methionine aminopeptidase 1" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-050626-124 metap1 "methionyl aminopeptidase 1" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|A6QLA4 METAP1 "Methionine aminopeptidase 1" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1S0C0 METAP1 "Methionine aminopeptidase" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|F1NI90 METAP1 "Methionine aminopeptidase" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|P53582 METAP1 "Methionine aminopeptidase 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
MGI|MGI:1922874 Metap1 "methionyl aminopeptidase 1" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|1305545 Metap1 "methionyl aminopeptidase 1" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
WB|WBGene00003129 map-1 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P53582AMPM1_HUMAN3, ., 4, ., 1, 1, ., 1, 80.52660.87390.7901yesno
Q5ZIM5AMPM1_CHICK3, ., 4, ., 1, 1, ., 1, 80.51480.91400.8285yesno
Q9SLN5AMP1A_ARATH3, ., 4, ., 1, 1, ., 1, 80.82290.91970.8065yesno
Q4QRK0AMPM1_DANRE3, ., 4, ., 1, 1, ., 1, 80.50.91110.8238yesno
Q8BP48AMPM1_MOUSE3, ., 4, ., 1, 1, ., 1, 80.52660.87390.7901yesno
A6QLA4AMPM1_BOVIN3, ., 4, ., 1, 1, ., 1, 80.52970.87390.7901yesno
Q5I0A0AMPM1_XENTR3, ., 4, ., 1, 1, ., 1, 80.50.91400.8285yesno
Q5RBF3AMPM1_PONAB3, ., 4, ., 1, 1, ., 1, 80.52660.87390.7901yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.4.11.180.991
3rd Layer3.4.110.976

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
estExt_Genewise1_v1.C_LG_XIV0718
RecName- Full=Methionine aminopeptidase; EC=3.4.11.18;; Removes the amino-terminal methionine from nascent proteins (By similarity) (396 aa)
(Populus trichocarpa)
Predicted Functional Partners:
gw1.IV.3048.1
SubName- Full=Putative uncharacterized protein; (227 aa)
•     • 0.713
gw1.VI.8.1
SecY protein (430 aa)
•     • 0.668
rps8
RecName- Full=30S ribosomal protein S8, chloroplastic;; One of the primary rRNA binding protein [...] (134 aa)
•     • 0.654
eugene3.00141000
hypothetical protein (227 aa)
•     • 0.652
gw1.16155.2.1
Predicted protein (206 aa)
•     • 0.625
gw1.XVIII.2978.1
SecY protein (478 aa)
•     • 0.584
gw1.VI.1738.1
hypothetical protein (72 aa)
•       0.563
gw1.II.2942.1
SubName- Full=Putative uncharacterized protein; (218 aa)
•     • 0.546
estExt_Genewise1_v1.C_LG_X3691
SubName- Full=Putative uncharacterized protein; (165 aa)
•     • 0.544
fgenesh4_pm.C_LG_XVIII000087
hypothetical protein (78 aa)
•       0.543

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query349
PLN03158396 PLN03158, PLN03158, methionine aminopeptidase; Pro 0.0
cd01086238 cd01086, MetAP1, Methionine Aminopeptidase 1 1e-102
PRK05716252 PRK05716, PRK05716, methionine aminopeptidase; Val 1e-97
COG0024255 COG0024, Map, Methionine aminopeptidase [Translati 5e-88
TIGR00500247 TIGR00500, met_pdase_I, methionine aminopeptidase, 4e-82
PRK12896255 PRK12896, PRK12896, methionine aminopeptidase; Rev 6e-77
PRK12318291 PRK12318, PRK12318, methionine aminopeptidase; Pro 3e-59
pfam00557208 pfam00557, Peptidase_M24, Metallopeptidase family 6e-52
cd01066207 cd01066, APP_MetAP, A family including aminopeptid 2e-38
PRK12897248 PRK12897, PRK12897, methionine aminopeptidase; Rev 5e-31
COG0006384 COG0006, PepP, Xaa-Pro aminopeptidase [Amino acid 7e-31
PRK08671291 PRK08671, PRK08671, methionine aminopeptidase; Pro 1e-28
cd01092208 cd01092, APP-like, Similar to Prolidase and Aminop 2e-24
TIGR00501295 TIGR00501, met_pdase_II, methionine aminopeptidase 2e-21
cd01088291 cd01088, MetAP2, Methionine Aminopeptidase 2 2e-21
PRK07281286 PRK07281, PRK07281, methionine aminopeptidase; Rev 3e-18
PRK09795361 PRK09795, PRK09795, aminopeptidase; Provisional 3e-12
PRK14575406 PRK14575, PRK14575, putative peptidase; Provisiona 8e-11
PRK15173323 PRK15173, PRK15173, peptidase; Provisional 9e-11
PRK10879438 PRK10879, PRK10879, proline aminopeptidase P II; P 3e-10
PRK14576405 PRK14576, PRK14576, putative endopeptidase; Provis 1e-09
cd01087243 cd01087, Prolidase, Prolidase 1e-08
TIGR00495 389 TIGR00495, crvDNA_42K, 42K curved DNA binding prot 6e-08
PLN03144 606 PLN03144, PLN03144, Carbon catabolite repressor pr 2e-06
cd01089228 cd01089, PA2G4-like, Related to aminopepdidase M, 3e-06
cd01090228 cd01090, Creatinase, Creatine amidinohydrolase 0.001
PTZ00053 470 PTZ00053, PTZ00053, methionine aminopeptidase 2; P 0.002
TIGR02993391 TIGR02993, ectoine_eutD, ectoine utilization prote 0.004
>gnl|CDD|215607 PLN03158, PLN03158, methionine aminopeptidase; Provisional Back     alignment and domain information 
 Score =  648 bits (1674), Expect = 0.0
 Identities = 263/319 (82%), Positives = 289/319 (90%), Gaps = 2/319 (0%)

Query: 4   GSDAAETTSLSCVRCGKPAHLQCPKCMELKLPREGAAFCTQDCFKASWTSHKSVHLKAKL 63
             +A  T+ L+C RC KPAHLQCPKC+ELKLPREGA+FC+QDCFKA+W+SHKSVH KAKL
Sbjct: 1   MEEALTTSPLACARCSKPAHLQCPKCLELKLPREGASFCSQDCFKAAWSSHKSVHTKAKL 60

Query: 64  SAPGTGENSSLVSEGWRYCIKKGQARTPKLPHFDWTGTLRPYPISSKLTVPAYIELPDWA 123
           S+   G+NS   +EGW YC+KKGQART KLP FDWTG LRPYPIS +  VP +I  PDWA
Sbjct: 61  SS--IGQNSDAPAEGWLYCLKKGQARTSKLPDFDWTGPLRPYPISPRRVVPDHIPKPDWA 118

Query: 124 LDGTPKVEPNSDLQHVVEIKTPDQIERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVH 183
           LDGTPK+EPNSDLQH VEIKTP+QI+RMRETCRIAREVLDAAAR I+PGVTTDEIDRVVH
Sbjct: 119 LDGTPKIEPNSDLQHSVEIKTPEQIQRMRETCRIAREVLDAAARAIKPGVTTDEIDRVVH 178

Query: 184 EATITAGGYPSPLNYHFFPKSCCTSVNEVICHGIPDSRKLEDGDIVNIDVTVYYKGVHGD 243
           EATI AGGYPSPLNYHFFPKSCCTSVNEVICHGIPD+RKLEDGDIVN+DVTVYYKG HGD
Sbjct: 179 EATIAAGGYPSPLNYHFFPKSCCTSVNEVICHGIPDARKLEDGDIVNVDVTVYYKGCHGD 238

Query: 244 LNETYFVGNADEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHATMSGFSVVKSY 303
           LNET+FVGN DEASRQLV+CTYECLEKAI+IVKPGVR+RE+GEVINRHATMSG SVVKSY
Sbjct: 239 LNETFFVGNVDEASRQLVKCTYECLEKAIAIVKPGVRYREVGEVINRHATMSGLSVVKSY 298

Query: 304 CGHGIGELFHCAPNIPHYS 322
           CGHGIGELFHCAPNIPHY+
Sbjct: 299 CGHGIGELFHCAPNIPHYA 317

Length = 396
>gnl|CDD|238519 cd01086, MetAP1, Methionine Aminopeptidase 1 Back     alignment and domain information
>gnl|CDD|235576 PRK05716, PRK05716, methionine aminopeptidase; Validated Back     alignment and domain information
>gnl|CDD|223103 COG0024, Map, Methionine aminopeptidase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|129591 TIGR00500, met_pdase_I, methionine aminopeptidase, type I Back     alignment and domain information
>gnl|CDD|237252 PRK12896, PRK12896, methionine aminopeptidase; Reviewed Back     alignment and domain information
>gnl|CDD|183434 PRK12318, PRK12318, methionine aminopeptidase; Provisional Back     alignment and domain information
>gnl|CDD|215993 pfam00557, Peptidase_M24, Metallopeptidase family M24 Back     alignment and domain information
>gnl|CDD|238514 cd01066, APP_MetAP, A family including aminopeptidase P, aminopeptidase M, and prolidase Back     alignment and domain information
>gnl|CDD|171806 PRK12897, PRK12897, methionine aminopeptidase; Reviewed Back     alignment and domain information
>gnl|CDD|223085 COG0006, PepP, Xaa-Pro aminopeptidase [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|181534 PRK08671, PRK08671, methionine aminopeptidase; Provisional Back     alignment and domain information
>gnl|CDD|238525 cd01092, APP-like, Similar to Prolidase and Aminopeptidase P Back     alignment and domain information
>gnl|CDD|129592 TIGR00501, met_pdase_II, methionine aminopeptidase, type II Back     alignment and domain information
>gnl|CDD|238521 cd01088, MetAP2, Methionine Aminopeptidase 2 Back     alignment and domain information
>gnl|CDD|180918 PRK07281, PRK07281, methionine aminopeptidase; Reviewed Back     alignment and domain information
>gnl|CDD|182080 PRK09795, PRK09795, aminopeptidase; Provisional Back     alignment and domain information
>gnl|CDD|173039 PRK14575, PRK14575, putative peptidase; Provisional Back     alignment and domain information
>gnl|CDD|185095 PRK15173, PRK15173, peptidase; Provisional Back     alignment and domain information
>gnl|CDD|182804 PRK10879, PRK10879, proline aminopeptidase P II; Provisional Back     alignment and domain information
>gnl|CDD|173040 PRK14576, PRK14576, putative endopeptidase; Provisional Back     alignment and domain information
>gnl|CDD|238520 cd01087, Prolidase, Prolidase Back     alignment and domain information
>gnl|CDD|129586 TIGR00495, crvDNA_42K, 42K curved DNA binding protein Back     alignment and domain information
>gnl|CDD|178689 PLN03144, PLN03144, Carbon catabolite repressor protein 4 homolog; Provisional Back     alignment and domain information
>gnl|CDD|238522 cd01089, PA2G4-like, Related to aminopepdidase M, this family contains proliferation-associated protein 2G4 Back     alignment and domain information
>gnl|CDD|238523 cd01090, Creatinase, Creatine amidinohydrolase Back     alignment and domain information
>gnl|CDD|240246 PTZ00053, PTZ00053, methionine aminopeptidase 2; Provisional Back     alignment and domain information
>gnl|CDD|211774 TIGR02993, ectoine_eutD, ectoine utilization protein EutD Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 349
KOG2738369 consensus Putative methionine aminopeptidase [Post 100.0
PLN03158396 methionine aminopeptidase; Provisional 100.0
COG0024255 Map Methionine aminopeptidase [Translation, riboso 100.0
PRK07281286 methionine aminopeptidase; Reviewed 100.0
PRK12897248 methionine aminopeptidase; Reviewed 100.0
PRK12318291 methionine aminopeptidase; Provisional 100.0
TIGR00500247 met_pdase_I methionine aminopeptidase, type I. Met 100.0
PRK05716252 methionine aminopeptidase; Validated 100.0
PRK09795361 aminopeptidase; Provisional 100.0
PRK12896255 methionine aminopeptidase; Reviewed 100.0
COG0006384 PepP Xaa-Pro aminopeptidase [Amino acid transport 100.0
TIGR02993391 ectoine_eutD ectoine utilization protein EutD. Mem 100.0
PRK15173323 peptidase; Provisional 100.0
PRK10879438 proline aminopeptidase P II; Provisional 100.0
PRK14575406 putative peptidase; Provisional 100.0
cd01090228 Creatinase Creatine amidinohydrolase. E.C.3.5.3.3. 100.0
cd01087243 Prolidase Prolidase. E.C. 3.4.13.9. Also known as 100.0
cd01086238 MetAP1 Methionine Aminopeptidase 1. E.C. 3.4.11.18 100.0
PRK14576405 putative endopeptidase; Provisional 100.0
cd01092208 APP-like Similar to Prolidase and Aminopeptidase P 100.0
PRK13607443 proline dipeptidase; Provisional 100.0
cd01085224 APP X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also 100.0
PF00557207 Peptidase_M24: Metallopeptidase family M24 This Pr 100.0
cd01066207 APP_MetAP A family including aminopeptidase P, ami 100.0
TIGR00495 389 crvDNA_42K 42K curved DNA binding protein. Protein 100.0
PRK08671291 methionine aminopeptidase; Provisional 100.0
TIGR00501295 met_pdase_II methionine aminopeptidase, type II. M 100.0
PTZ00053 470 methionine aminopeptidase 2; Provisional 100.0
cd01088291 MetAP2 Methionine Aminopeptidase 2. E.C. 3.4.11.18 100.0
cd01091243 CDC68-like Related to aminopeptidase P and aminope 100.0
cd01089228 PA2G4-like Related to aminopepdidase M, this famil 100.0
KOG2414488 consensus Putative Xaa-Pro aminopeptidase [Amino a 100.0
KOG2737492 consensus Putative metallopeptidase [General funct 99.97
KOG1189 960 consensus Global transcriptional regulator, cell d 99.84
KOG2413606 consensus Xaa-Pro aminopeptidase [Amino acid trans 99.84
KOG2775 397 consensus Metallopeptidase [General function predi 99.66
COG5406 1001 Nucleosome binding factor SPN, SPT16 subunit [Tran 99.61
KOG2776 398 consensus Metallopeptidase [General function predi 99.6
PLN03144 606 Carbon catabolite repressor protein 4 homolog; Pro 99.34
PF0175337 zf-MYND: MYND finger; InterPro: IPR002893 Zinc fin 97.96
cd01066207 APP_MetAP A family including aminopeptidase P, ami 97.52
KOG1710396 consensus MYND Zn-finger and ankyrin repeat protei 97.51
cd01092208 APP-like Similar to Prolidase and Aminopeptidase P 97.3
PLN03158 396 methionine aminopeptidase; Provisional 97.2
PRK05716252 methionine aminopeptidase; Validated 97.11
PRK15173323 peptidase; Provisional 97.0
TIGR00500247 met_pdase_I methionine aminopeptidase, type I. Met 96.98
cd01086 238 MetAP1 Methionine Aminopeptidase 1. E.C. 3.4.11.18 96.9
PRK09795361 aminopeptidase; Provisional 96.88
cd01090228 Creatinase Creatine amidinohydrolase. E.C.3.5.3.3. 96.86
PRK14575406 putative peptidase; Provisional 96.85
PRK12897248 methionine aminopeptidase; Reviewed 96.8
PRK14576405 putative endopeptidase; Provisional 96.74
cd01091243 CDC68-like Related to aminopeptidase P and aminope 96.66
TIGR02993391 ectoine_eutD ectoine utilization protein EutD. Mem 96.63
PRK12318291 methionine aminopeptidase; Provisional 96.58
cd01087243 Prolidase Prolidase. E.C. 3.4.13.9. Also known as 96.53
PRK12896255 methionine aminopeptidase; Reviewed 96.5
PRK07281286 methionine aminopeptidase; Reviewed 96.45
cd01088 291 MetAP2 Methionine Aminopeptidase 2. E.C. 3.4.11.18 96.38
PRK08671291 methionine aminopeptidase; Provisional 96.2
cd01089228 PA2G4-like Related to aminopepdidase M, this famil 96.2
PF00557207 Peptidase_M24: Metallopeptidase family M24 This Pr 96.12
KOG2738 369 consensus Putative methionine aminopeptidase [Post 96.09
COG0006384 PepP Xaa-Pro aminopeptidase [Amino acid transport 95.92
TIGR00501295 met_pdase_II methionine aminopeptidase, type II. M 95.5
TIGR00495389 crvDNA_42K 42K curved DNA binding protein. Protein 95.5
COG0024255 Map Methionine aminopeptidase [Translation, riboso 94.96
PRK10879438 proline aminopeptidase P II; Provisional 94.8
PTZ00053470 methionine aminopeptidase 2; Provisional 94.04
PF0443830 zf-HIT: HIT zinc finger; InterPro: IPR007529 Zinc 92.81
cd01085224 APP X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also 92.34
PRK13607443 proline dipeptidase; Provisional 91.54
PF0988959 DUF2116: Uncharacterized protein containing a Zn-r 89.91
KOG2857157 consensus Predicted MYND Zn-finger protein/hormone 85.97
PRK0041862 DNA gyrase inhibitor; Reviewed 84.71
PRK0134357 zinc-binding protein; Provisional 84.01
KOG1189 960 consensus Global transcriptional regulator, cell d 80.78
COG302465 Uncharacterized protein conserved in bacteria [Fun 80.19
>KOG2738 consensus Putative methionine aminopeptidase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information 
Probab=100.00  E-value=1.4e-93  Score=651.27  Aligned_cols=312  Identities=58%  Similarity=0.996  Sum_probs=296.1

Q ss_pred             cccccccc--cCCccccccchhhhcCCCCCCccccChhhhhhchhHHHHhhhhcccCCCCCCCCCCccccccchhcccCC
Q 018857           10 TTSLSCVR--CGKPAHLQCPKCMELKLPREGAAFCTQDCFKASWTSHKSVHLKAKLSAPGTGENSSLVSEGWRYCIKKGQ   87 (349)
Q Consensus        10 ~~~~~c~~--c~~~~~l~c~~c~~~~~~~~~~~fc~~~cf~~~w~~hk~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (349)
                      .....|++  |+++++||||+|+|++|+  ++|||+|+|||.+|.+||++|.++.               .     ....
T Consensus         4 ~~~~~c~~~~c~~~a~l~Cp~c~~~~i~--~~~fc~q~cf~~~w~~hK~~h~~~~---------------~-----~~~~   61 (369)
T KOG2738|consen    4 IAKISCEGLQCGSEASLQCPTCLKLGIK--SAYFCAQECFKNSWLSHKKLHRKAL---------------R-----IRKE   61 (369)
T ss_pred             chhceeeccccCChhhccCchhhhcCCC--cccccCchhhhcchhhhhhhcccch---------------h-----hhhh
Confidence            34567976  999999999999999997  6899999999999999999997442               0     1345


Q ss_pred             CCCCCCCCCcccCccccccCCCCcccCCCCCCCccccCCCCCCCCCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHH
Q 018857           88 ARTPKLPHFDWTGTLRPYPISSKLTVPAYIELPDWALDGTPKVEPNSDLQHVVEIKTPDQIERMRETCRIAREVLDAAAR  167 (349)
Q Consensus        88 ~~~~~~~~~~~~g~~~p~~~~~~~~vp~~i~~p~ya~~g~~~~e~~~~~~~~r~vKs~~EIe~~R~A~~ia~~~l~~~~~  167 (349)
                      +.++|||.|.|+|+||||++||+|.||++|+||+||++|.+.+|+....+....|+++++|+.||+||+|++++++.|..
T Consensus        62 g~~~p~p~~~~~g~Lr~~pvsprr~VP~hI~rPdya~~g~s~se~~~~~s~~i~i~~~e~ie~mR~ac~LarevLd~Aa~  141 (369)
T KOG2738|consen   62 GQYNPWPKFRFTGPLRPGPVSPRRPVPDHIPRPDYADSGVSLSEQPEISSNEIKILDPEGIEGMRKACRLAREVLDYAAT  141 (369)
T ss_pred             ccCCCCccccccCCccccCCCCCCcCCccCCCCchhhcCCcccccccccccceeccCHHHHHHHHHHHHHHHHHHHHHhh
Confidence            67889999999999999999999999999999999999999999988888788999999999999999999999999999


Q ss_pred             hccCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceeeecCCCcccccCCCCCCCCCCCEEEEEeeceeCcEEeceece
Q 018857          168 MIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVICHGIPDSRKLEDGDIVNIDVTVYYKGVHGDLNET  247 (349)
Q Consensus       168 ~i~pGvte~Ei~~~~~~~~~~~g~~ps~l~~~~fp~~v~~g~n~~~~H~~p~~r~L~~GDiv~iD~g~~~~GY~~D~~RT  247 (349)
                      +++||+|++|||+++|++++++|+|||||||++||+++|+|+|+++|||+||.|+|++||||+||++++++|||+|+++|
T Consensus       142 ~v~PgvTTdEiD~~VH~a~Ierg~YPSPLnYy~FPKS~CTSVNEviCHGIPD~RpLedGDIvNiDVtvY~~GyHGDlneT  221 (369)
T KOG2738|consen  142 LVRPGVTTDEIDRAVHNAIIERGAYPSPLNYYGFPKSVCTSVNEVICHGIPDSRPLEDGDIVNIDVTVYLNGYHGDLNET  221 (369)
T ss_pred             hcCCCccHHHHHHHHHHHHHhcCCcCCCcccCCCchhhhcchhheeecCCCCcCcCCCCCEEeEEEEEEeccccCccccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EeeCCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHhHHHHHHHHHHHHcCCCcccCcccccCCCcCccCCCcCCCCCCCC-
Q 018857          248 YFVGNADEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHATMSGFSVVKSYCGHGIGELFHCAPNIPHYSSLYH-  326 (349)
Q Consensus       248 ~~vG~~~~~~~~l~~~~~ea~~~ai~~~kPG~~~~eI~~ai~~~~~~~G~~~~~~~~GHgIG~~~he~P~i~~~~~~~~-  326 (349)
                      |++|+++++.++|+++++||++.||+++|||++++||++.|++++.++||++++.|||||||..||..|+|+||++|.. 
T Consensus       222 ffvG~Vde~~k~LVkvT~EcL~kaI~~~kpGv~freiG~iI~kha~~~g~sVVr~ycGHGig~~FH~~PnipHya~n~a~  301 (369)
T KOG2738|consen  222 FFVGNVDEKAKKLVKVTRECLEKAIAIVKPGVSFREIGNIIQKHATKNGYSVVRSYCGHGIGRVFHCAPNIPHYAKNKAP  301 (369)
T ss_pred             eEeeccCHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHhhhcCceeehhhhccccccccccCCCchhhcccCCc
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999999999765 


Q ss_pred             -cccCce-EEEecceEEcC
Q 018857          327 -AFQPHI-FYIQKSFYFMD  343 (349)
Q Consensus       327 -~Le~GM-ftIEPgly~~~  343 (349)
                       ++.+|| |||||-|-+..
T Consensus       302 GvM~~G~tFTIEPmit~G~  320 (369)
T KOG2738|consen  302 GVMKPGQTFTIEPMITIGT  320 (369)
T ss_pred             ceeecCceEEeeeeecccc
Confidence             899999 99999887643

>PLN03158 methionine aminopeptidase; Provisional Back     alignment and domain information
>COG0024 Map Methionine aminopeptidase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK07281 methionine aminopeptidase; Reviewed Back     alignment and domain information
>PRK12897 methionine aminopeptidase; Reviewed Back     alignment and domain information
>PRK12318 methionine aminopeptidase; Provisional Back     alignment and domain information
>TIGR00500 met_pdase_I methionine aminopeptidase, type I Back     alignment and domain information
>PRK05716 methionine aminopeptidase; Validated Back     alignment and domain information
>PRK09795 aminopeptidase; Provisional Back     alignment and domain information
>PRK12896 methionine aminopeptidase; Reviewed Back     alignment and domain information
>COG0006 PepP Xaa-Pro aminopeptidase [Amino acid transport and metabolism] Back     alignment and domain information
>TIGR02993 ectoine_eutD ectoine utilization protein EutD Back     alignment and domain information
>PRK15173 peptidase; Provisional Back     alignment and domain information
>PRK10879 proline aminopeptidase P II; Provisional Back     alignment and domain information
>PRK14575 putative peptidase; Provisional Back     alignment and domain information
>cd01090 Creatinase Creatine amidinohydrolase Back     alignment and domain information
>cd01087 Prolidase Prolidase Back     alignment and domain information
>cd01086 MetAP1 Methionine Aminopeptidase 1 Back     alignment and domain information
>PRK14576 putative endopeptidase; Provisional Back     alignment and domain information
>cd01092 APP-like Similar to Prolidase and Aminopeptidase P Back     alignment and domain information
>PRK13607 proline dipeptidase; Provisional Back     alignment and domain information
>cd01085 APP X-Prolyl Aminopeptidase 2 Back     alignment and domain information
>PF00557 Peptidase_M24: Metallopeptidase family M24 This Prosite entry corresponds to sub-family M24B This Prosite entry corresponds to sub-families M24A and M24C; InterPro: IPR000994 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>cd01066 APP_MetAP A family including aminopeptidase P, aminopeptidase M, and prolidase Back     alignment and domain information
>TIGR00495 crvDNA_42K 42K curved DNA binding protein Back     alignment and domain information
>PRK08671 methionine aminopeptidase; Provisional Back     alignment and domain information
>TIGR00501 met_pdase_II methionine aminopeptidase, type II Back     alignment and domain information
>PTZ00053 methionine aminopeptidase 2; Provisional Back     alignment and domain information
>cd01088 MetAP2 Methionine Aminopeptidase 2 Back     alignment and domain information
>cd01091 CDC68-like Related to aminopeptidase P and aminopeptidase M, a member of this domain family is present in cell division control protein 68, a transcription factor Back     alignment and domain information
>cd01089 PA2G4-like Related to aminopepdidase M, this family contains proliferation-associated protein 2G4 Back     alignment and domain information
>KOG2414 consensus Putative Xaa-Pro aminopeptidase [Amino acid transport and metabolism] Back     alignment and domain information
>KOG2737 consensus Putative metallopeptidase [General function prediction only] Back     alignment and domain information
>KOG1189 consensus Global transcriptional regulator, cell division control protein [Amino acid transport and metabolism] Back     alignment and domain information
>KOG2413 consensus Xaa-Pro aminopeptidase [Amino acid transport and metabolism] Back     alignment and domain information
>KOG2775 consensus Metallopeptidase [General function prediction only] Back     alignment and domain information
>COG5406 Nucleosome binding factor SPN, SPT16 subunit [Transcription / DNA replication, recombination, and repair / Chromatin structure and dynamics] Back     alignment and domain information
>KOG2776 consensus Metallopeptidase [General function prediction only] Back     alignment and domain information
>PLN03144 Carbon catabolite repressor protein 4 homolog; Provisional Back     alignment and domain information
>PF01753 zf-MYND: MYND finger; InterPro: IPR002893 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule Back     alignment and domain information
>cd01066 APP_MetAP A family including aminopeptidase P, aminopeptidase M, and prolidase Back     alignment and domain information
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only] Back     alignment and domain information
>cd01092 APP-like Similar to Prolidase and Aminopeptidase P Back     alignment and domain information
>PLN03158 methionine aminopeptidase; Provisional Back     alignment and domain information
>PRK05716 methionine aminopeptidase; Validated Back     alignment and domain information
>PRK15173 peptidase; Provisional Back     alignment and domain information
>TIGR00500 met_pdase_I methionine aminopeptidase, type I Back     alignment and domain information
>cd01086 MetAP1 Methionine Aminopeptidase 1 Back     alignment and domain information
>PRK09795 aminopeptidase; Provisional Back     alignment and domain information
>cd01090 Creatinase Creatine amidinohydrolase Back     alignment and domain information
>PRK14575 putative peptidase; Provisional Back     alignment and domain information
>PRK12897 methionine aminopeptidase; Reviewed Back     alignment and domain information
>PRK14576 putative endopeptidase; Provisional Back     alignment and domain information
>cd01091 CDC68-like Related to aminopeptidase P and aminopeptidase M, a member of this domain family is present in cell division control protein 68, a transcription factor Back     alignment and domain information
>TIGR02993 ectoine_eutD ectoine utilization protein EutD Back     alignment and domain information
>PRK12318 methionine aminopeptidase; Provisional Back     alignment and domain information
>cd01087 Prolidase Prolidase Back     alignment and domain information
>PRK12896 methionine aminopeptidase; Reviewed Back     alignment and domain information
>PRK07281 methionine aminopeptidase; Reviewed Back     alignment and domain information
>cd01088 MetAP2 Methionine Aminopeptidase 2 Back     alignment and domain information
>PRK08671 methionine aminopeptidase; Provisional Back     alignment and domain information
>cd01089 PA2G4-like Related to aminopepdidase M, this family contains proliferation-associated protein 2G4 Back     alignment and domain information
>PF00557 Peptidase_M24: Metallopeptidase family M24 This Prosite entry corresponds to sub-family M24B This Prosite entry corresponds to sub-families M24A and M24C; InterPro: IPR000994 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>KOG2738 consensus Putative methionine aminopeptidase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG0006 PepP Xaa-Pro aminopeptidase [Amino acid transport and metabolism] Back     alignment and domain information
>TIGR00501 met_pdase_II methionine aminopeptidase, type II Back     alignment and domain information
>TIGR00495 crvDNA_42K 42K curved DNA binding protein Back     alignment and domain information
>COG0024 Map Methionine aminopeptidase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK10879 proline aminopeptidase P II; Provisional Back     alignment and domain information
>PTZ00053 methionine aminopeptidase 2; Provisional Back     alignment and domain information
>PF04438 zf-HIT: HIT zinc finger; InterPro: IPR007529 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule Back     alignment and domain information
>cd01085 APP X-Prolyl Aminopeptidase 2 Back     alignment and domain information
>PRK13607 proline dipeptidase; Provisional Back     alignment and domain information
>PF09889 DUF2116: Uncharacterized protein containing a Zn-ribbon (DUF2116); InterPro: IPR019216 This entry contains various hypothetical prokaryotic proteins whose functions are unknown Back     alignment and domain information
>KOG2857 consensus Predicted MYND Zn-finger protein/hormone receptor interactor [Transcription] Back     alignment and domain information
>PRK00418 DNA gyrase inhibitor; Reviewed Back     alignment and domain information
>PRK01343 zinc-binding protein; Provisional Back     alignment and domain information
>KOG1189 consensus Global transcriptional regulator, cell division control protein [Amino acid transport and metabolism] Back     alignment and domain information
>COG3024 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query349
4fli_A326 Human Metap1 With Bengamide Analog Y16, In Mn Form 1e-77
2b3h_A329 Crystal Structure Of Human Methionine Aminopeptidas 2e-77
2g6p_A304 Crystal Structure Of Truncated (Delta 1-89) Human M 2e-77
3s6b_A368 Crystal Structure Of Methionine Aminopeptidase 1b F 8e-66
4fuk_A337 Aminopeptidase From Trypanosoma Brucei Length = 337 1e-62
3iu7_A288 M. Tuberculosis Methionine Aminopeptidase With Mn I 1e-50
1y1n_A291 Identification Of Sh3 Motif In M. Tuberculosis Meth 1e-50
3pka_A285 M. Tuberculosis Metap With Bengamide Analog Y02, In 1e-50
3ror_A291 Crystal Structure Of C105s Mutant Of Mycobacterium 9e-50
1c27_A263 E. Coli Methionine Aminopeptidase:norleucine Phosph 8e-45
3mat_A265 E.coli Methionine Aminopeptidase Transition-state I 9e-45
4mat_A278 E.Coli Methionine Aminopeptidase His79ala Mutant Le 9e-45
2mat_A264 E.Coli Methionine Aminopeptidase At 1.9 Angstrom Re 9e-45
4a6v_A265 X-Ray Structures Of Oxazole Hydroxamate Ecmetap-Mn 2e-44
2gg0_A263 Novel Bacterial Methionine Aminopeptidase Inhibitor 2e-44
1xnz_A264 Crystal Structure Of Mn(Ii) Form Of E. Coli. Methio 2e-44
2p99_A261 E. Coli Methionine Aminopeptidase Monometalated Wit 2e-44
2p98_A262 E. Coli Methionine Aminopeptidase Monometalated Wit 2e-44
2gu4_A263 E. Coli Methionine Aminopeptidase In Complex With N 3e-44
2gtx_A261 Structural Basis Of Catalysis By Mononuclear Methio 3e-44
3mx6_A262 Crystal Structure Of Methionine Aminopeptidase From 4e-42
3mr1_A252 Crystal Structure Of Methionine Aminopeptidase From 5e-42
1o0x_A262 Crystal Structure Of Methionine Aminopeptidase (Tm1 7e-33
1qxw_A252 Crystal Structure Of Staphyloccocus Aureus In Compl 1e-27
3tb5_A264 Crystal Structure Of The Enterococcus Faecalis Meth 3e-26
3tav_A286 Crystal Structure Of A Methionine Aminopeptidase Fr 4e-26
2dfi_A 301 Crystal Structure Of Pf-Map(1-292)-C Length = 301 7e-16
1xgs_A 295 Methionine Aminopeptidase From Hyperthermophile Pyr 7e-16
1pv9_A348 Prolidase From Pyrococcus Furiosus Length = 348 2e-12
3q6d_A356 Xaa-Pro Dipeptidase From Bacillus Anthracis. Length 2e-12
1wy2_A351 Crystal Structure Of The Prolidase From Pyrococcus 9e-12
2v3z_A440 Glu383ala Escherichia Coli Aminopeptidase P In Comp 2e-08
1wl9_A440 Structure Of Aminopeptidase P From E. Coli Length = 2e-08
2bwv_A440 His361ala Escherichia Coli Aminopeptidase P Length 2e-08
1m35_A440 Aminopeptidase P From Escherichia Coli Length = 440 6e-08
1jaw_A440 Aminopeptidase P From E. Coli Low Ph Form Length = 6e-08
2bwy_A440 Glu383ala Escherichia Coli Aminopeptidase P Length 6e-08
2bww_A440 His350ala Escherichia Coli Aminopeptidase P Length 6e-08
2bws_A440 His243ala Escherichia Coli Aminopeptidase P Length 2e-07
2zsg_A359 Crystal Structure Of X-Pro Aminopeptidase From Ther 3e-07
2bwx_A441 His354ala Escherichia Coli Aminopeptidase P Length 5e-07
2bwt_A440 Asp260ala Escherichia Coli Aminopeptidase P Length 5e-07
2bwu_A440 Asp271ala Escherichia Coli Aminopeptidase P Length 5e-07
1wn1_A356 Crystal Structure Of Dipeptiase From Pyrococcus Hor 3e-05
4ege_A378 Crystal Structure Of Dipeptidase Pepe From Mycobact 4e-05
2v6c_A 353 Crystal Structure Of Erbb3 Binding Protein 1 (Ebp1) 7e-05
2q8k_A 401 The Crystal Structure Of Ebp1 Length = 401 4e-04
3j2i_A 394 Structure Of Late Pre-60s Ribosomal Subunits With N 4e-04
1chm_A401 Enzymatic Mechanism Of Creatine Amidinohydrolase As 9e-04
>pdb|4FLI|A Chain A, Human Metap1 With Bengamide Analog Y16, In Mn Form Length = 326 Back     alignment and structure 
Iteration: 1

 Score =  286 bits (732), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 138/230 (60%), Positives = 171/230 (74%), Gaps = 3/230 (1%)
Query: 96  FDWTGTLRP-YPISSKLTVPAYIELPDWALDGTPKVEPNSDLQHVVEIK--TPDQIERMR 152
           + +TG LRP YP+     VP+YI+ PD+A       E    L+   +IK  + + IE MR
Sbjct: 2   YRYTGKLRPHYPLMPTRPVPSYIQRPDYADHPLGMSESEQALKGTSQIKLLSSEDIEGMR 61
Query: 153 ETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEV 212
             CR+AREVLD AA MI+PGVTT+EID  VH A I    YPSPLNY+ FPKSCCTSVNEV
Sbjct: 62  LVCRLAREVLDVAAGMIKPGVTTEEIDHAVHLACIARNCYPSPLNYYNFPKSCCTSVNEV 121
Query: 213 ICHGIPDSRKLEDGDIVNIDVTVYYKGVHGDLNETYFVGNADEASRQLVQCTYECLEKAI 272
           ICHGIPD R L++GDIVN+D+T+Y  G HGDLNET+FVG  D+ +R+LVQ TYECL +AI
Sbjct: 122 ICHGIPDRRPLQEGDIVNVDITLYRNGYHGDLNETFFVGEVDDGARKLVQTTYECLMQAI 181
Query: 273 SIVKPGVRFREIGEVINRHATMSGFSVVKSYCGHGIGELFHCAPNIPHYS 322
             VKPGVR+RE+G +I +HA  +GFSVV+SYCGHGI +LFH APN+PHY+
Sbjct: 182 DAVKPGVRYRELGNIIQKHAQANGFSVVRSYCGHGIHKLFHTAPNVPHYA 231
>pdb|2B3H|A Chain A, Crystal Structure Of Human Methionine Aminopeptidase Type I With A Third Cobalt In The Active Site Length = 329 Back     alignment and structure
>pdb|2G6P|A Chain A, Crystal Structure Of Truncated (Delta 1-89) Human Methionine Aminopeptidase Type 1 In Complex With Pyridyl Pyrimidine Derivative Length = 304 Back     alignment and structure
>pdb|3S6B|A Chain A, Crystal Structure Of Methionine Aminopeptidase 1b From Plasmodium Falciparum, Pf10_0150 Length = 368 Back     alignment and structure
>pdb|4FUK|A Chain A, Aminopeptidase From Trypanosoma Brucei Length = 337 Back     alignment and structure
>pdb|3IU7|A Chain A, M. Tuberculosis Methionine Aminopeptidase With Mn Inhibitor A02 Length = 288 Back     alignment and structure
>pdb|1Y1N|A Chain A, Identification Of Sh3 Motif In M. Tuberculosis Methionine Aminopeptidase Suggests A Mode Of Interaction With The Ribosome Length = 291 Back     alignment and structure
>pdb|3PKA|A Chain A, M. Tuberculosis Metap With Bengamide Analog Y02, In Mn Form Length = 285 Back     alignment and structure
>pdb|3ROR|A Chain A, Crystal Structure Of C105s Mutant Of Mycobacterium Tuberculosis Methionine Aminopeptidase Length = 291 Back     alignment and structure
>pdb|1C27|A Chain A, E. Coli Methionine Aminopeptidase:norleucine Phosphonate Complex Length = 263 Back     alignment and structure
>pdb|3MAT|A Chain A, E.coli Methionine Aminopeptidase Transition-state Inhibitor Complex Length = 265 Back     alignment and structure
>pdb|4MAT|A Chain A, E.Coli Methionine Aminopeptidase His79ala Mutant Length = 278 Back     alignment and structure
>pdb|2MAT|A Chain A, E.Coli Methionine Aminopeptidase At 1.9 Angstrom Resolution Length = 264 Back     alignment and structure
>pdb|4A6V|A Chain A, X-Ray Structures Of Oxazole Hydroxamate Ecmetap-Mn Complexes Length = 265 Back     alignment and structure
>pdb|2GG0|A Chain A, Novel Bacterial Methionine Aminopeptidase Inhibitors Length = 263 Back     alignment and structure
>pdb|1XNZ|A Chain A, Crystal Structure Of Mn(Ii) Form Of E. Coli. Methionine Aminopeptidase In Complex With 5-(2-Chlorophenyl)furan-2- Carboxylic Acid Length = 264 Back     alignment and structure
>pdb|2P99|A Chain A, E. Coli Methionine Aminopeptidase Monometalated With Inhibitor Ye6 Length = 261 Back     alignment and structure
>pdb|2P98|A Chain A, E. Coli Methionine Aminopeptidase Monometalated With Inhibitor Ye7 Length = 262 Back     alignment and structure
>pdb|2GU4|A Chain A, E. Coli Methionine Aminopeptidase In Complex With Nlep, 1: 0.5, Di-Metalated Length = 263 Back     alignment and structure
>pdb|2GTX|A Chain A, Structural Basis Of Catalysis By Mononuclear Methionine Aminopeptidase Length = 261 Back     alignment and structure
>pdb|3MX6|A Chain A, Crystal Structure Of Methionine Aminopeptidase From Ricketts Prowazekii Bound To Methionine Length = 262 Back     alignment and structure
>pdb|3MR1|A Chain A, Crystal Structure Of Methionine Aminopeptidase From Ricketts Prowazekii Length = 252 Back     alignment and structure
>pdb|1O0X|A Chain A, Crystal Structure Of Methionine Aminopeptidase (Tm1478) From Thermotoga Maritima At 1.90 A Resolution Length = 262 Back     alignment and structure
>pdb|1QXW|A Chain A, Crystal Structure Of Staphyloccocus Aureus In Complex With An Aminoketone Inhibitor 54135. Length = 252 Back     alignment and structure
>pdb|3TB5|A Chain A, Crystal Structure Of The Enterococcus Faecalis Methionine Aminopeptidase Apo Form Length = 264 Back     alignment and structure
>pdb|3TAV|A Chain A, Crystal Structure Of A Methionine Aminopeptidase From Mycobacterium Abscessus Length = 286 Back     alignment and structure
>pdb|2DFI|A Chain A, Crystal Structure Of Pf-Map(1-292)-C Length = 301 Back     alignment and structure
>pdb|1XGS|A Chain A, Methionine Aminopeptidase From Hyperthermophile Pyrococcus Furiosus Length = 295 Back     alignment and structure
>pdb|1PV9|A Chain A, Prolidase From Pyrococcus Furiosus Length = 348 Back     alignment and structure
>pdb|3Q6D|A Chain A, Xaa-Pro Dipeptidase From Bacillus Anthracis. Length = 356 Back     alignment and structure
>pdb|1WY2|A Chain A, Crystal Structure Of The Prolidase From Pyrococcus Horikoshii Ot3 Length = 351 Back     alignment and structure
>pdb|2V3Z|A Chain A, Glu383ala Escherichia Coli Aminopeptidase P In Complex With Substrate Length = 440 Back     alignment and structure
>pdb|1WL9|A Chain A, Structure Of Aminopeptidase P From E. Coli Length = 440 Back     alignment and structure
>pdb|2BWV|A Chain A, His361ala Escherichia Coli Aminopeptidase P Length = 440 Back     alignment and structure
>pdb|1M35|A Chain A, Aminopeptidase P From Escherichia Coli Length = 440 Back     alignment and structure
>pdb|1JAW|A Chain A, Aminopeptidase P From E. Coli Low Ph Form Length = 440 Back     alignment and structure
>pdb|2BWY|A Chain A, Glu383ala Escherichia Coli Aminopeptidase P Length = 440 Back     alignment and structure
>pdb|2BWW|A Chain A, His350ala Escherichia Coli Aminopeptidase P Length = 440 Back     alignment and structure
>pdb|2BWS|A Chain A, His243ala Escherichia Coli Aminopeptidase P Length = 440 Back     alignment and structure
>pdb|2ZSG|A Chain A, Crystal Structure Of X-Pro Aminopeptidase From Thermotoga Maritima Msb8 Length = 359 Back     alignment and structure
>pdb|2BWT|A Chain A, Asp260ala Escherichia Coli Aminopeptidase P Length = 440 Back     alignment and structure
>pdb|2BWU|A Chain A, Asp271ala Escherichia Coli Aminopeptidase P Length = 440 Back     alignment and structure
>pdb|1WN1|A Chain A, Crystal Structure Of Dipeptiase From Pyrococcus Horikoshii Ot3 Length = 356 Back     alignment and structure
>pdb|4EGE|A Chain A, Crystal Structure Of Dipeptidase Pepe From Mycobacterium Ulcerans Length = 378 Back     alignment and structure
>pdb|2V6C|A Chain A, Crystal Structure Of Erbb3 Binding Protein 1 (Ebp1) Length = 353 Back     alignment and structure
>pdb|2Q8K|A Chain A, The Crystal Structure Of Ebp1 Length = 401 Back     alignment and structure
>pdb|3J2I|A Chain A, Structure Of Late Pre-60s Ribosomal Subunits With Nuclear Export Factor Arx1 Bound At The Peptide Exit Tunnel Length = 394 Back     alignment and structure
>pdb|1CHM|A Chain A, Enzymatic Mechanism Of Creatine Amidinohydrolase As Deduced From Crystal Structures Length = 401 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query349
3s6b_A368 Methionine aminopeptidase; malaria, proteolysis, " 1e-153
2b3h_A329 Methionine aminopeptidase 1; hydrolase, metallopro 1e-143
3pka_A285 Methionine aminopeptidase; hydrolase-hydrolase inh 1e-140
3mx6_A262 Methionine aminopeptidase; seattle structural geno 1e-110
2gg2_A263 Methionine aminopeptidase; PITA-bread fold, MAP in 1e-108
1qxy_A252 Methionyl aminopeptidase; PITA bread fold, hydrola 6e-98
3tb5_A264 Methionine aminopeptidase; hydrolase, metalloprote 6e-91
1o0x_A262 Methionine aminopeptidase; TM1478, structural geno 3e-90
3tav_A286 Methionine aminopeptidase; ssgcid, seattle structu 3e-84
1xgs_A295 Methionine aminopeptidase; hyperthermophIle; 1.75A 1e-56
2q8k_A 401 Proliferation-associated protein 2G4; EBP1, PA2G4, 2e-53
1b6a_A 478 Methionine aminopeptidase; angiogenesis inhibitor; 1e-43
2nw5_A 360 Methionine aminopeptidase 2; metap2, structural ge 1e-42
1kp0_A402 Creatine amidinohydrolase; alpha betal, 3-layer(AB 1e-27
1chm_A401 Creatine amidinohydrolase; creatinase; 1.90A {Pseu 6e-26
1wy2_A351 XAA-Pro dipeptidase; structural genomics, prolidas 2e-23
1wn1_A356 Dipeptidase; prolidase, cobalt(II), structural gen 5e-23
2zsg_A359 Aminopeptidase P, putative; hydrolase; 1.65A {Ther 6e-23
3q6d_A356 Proline dipeptidase; structural genomics, csgid, c 7e-23
4ege_A378 Dipeptidase PEPE; structural genomics, seattle str 2e-22
4b28_A470 Metallopeptidase, family M24, putative; lyase, ime 8e-21
4b28_A470 Metallopeptidase, family M24, putative; lyase, ime 8e-05
3biq_A467 FACT complex subunit SPT16; PITA-bread, aminopepti 5e-18
3cb6_A444 FACT complex subunit SPT16; peptidase homology dom 1e-15
3ig4_A427 XAA-Pro aminopeptidase; csgid, hydrolase, struct g 8e-12
3l24_A 517 XAA-Pro dipeptidase; PITA-bread, detoxification, h 1e-11
2iw2_A494 XAA-Pro dipeptidase; metallocarboxypeptidase, dise 3e-10
2v3z_A440 XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proli 3e-10
3rva_A451 Organophosphorus acid anhydrolase; PITA-bread fold 5e-10
2dj8_A60 Protein CBFA2T1; zinc finger MYND domain, protein 1e-05
2jw6_A52 Deformed epidermal autoregulatory factor 1 homolo; 1e-05
2d8q_A70 BLU protein, zinc finger MYND domain containing pr 3e-05
2od1_A60 Protein CBFA2T1; zinc finger, cross-braced topolog 4e-05
2odd_A64 Protein CBFA2T1; MYND zinc finger, cross-braced to 4e-05
>3s6b_A Methionine aminopeptidase; malaria, proteolysis, "PITA bread" fold, structur genomics, structural genomics consortium, SGC, hydrolase; 1.95A {Plasmodium falciparum} Length = 368 Back     alignment and structure
 Score =  433 bits (1115), Expect = e-153
 Identities = 120/301 (39%), Positives = 172/301 (57%), Gaps = 19/301 (6%)

Query: 24  LQCPKCMELKLPREGAAFCTQDCFKASWTSHKSVHLKAKLSAPGTGENSSLVSEGWRYCI 83
           +                      F+     H    +K  LS            + W Y  
Sbjct: 1   MHHHHHHSSGRE--------NLYFQGEKEDHLKTIVKKHLSPE---NFDPTNRKYWVY-- 47

Query: 84  KKGQARTPKLPHFDWTGTLRPYPISSKLTVPAYIELPDWALDGTPKVEPNSDLQHVVEIK 143
                      +F +TG +RP+P+S    VP++IE PD+A+   P+ E     +  + + 
Sbjct: 48  ---DDHLKNFVNFKFTGDVRPWPLSKINHVPSHIERPDYAISSIPESELIYKRKSDIYVN 104

Query: 144 TPDQIERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPK 203
             ++I+R+RE C + R+ LD A  ++ PGVTTDEIDR VHE  I    YPS LNY+ FPK
Sbjct: 105 NEEEIQRIREACILGRKTLDYAHTLVSPGVTTDEIDRKVHEFIIKNNAYPSTLNYYKFPK 164

Query: 204 SCCTSVNEVICHGIPDSRKLEDGDIVNIDVTVYYKGVHGDLNETYFVGNADEA---SRQL 260
           SCCTSVNE++CHGIPD R L+ GDI+NID++V+YKGVH DLNETYFVG+ ++     ++L
Sbjct: 165 SCCTSVNEIVCHGIPDYRPLKSGDIINIDISVFYKGVHSDLNETYFVGDINDVPKEGKEL 224

Query: 261 VQCTYECLEKAISIVKPGVRFREIGEVINRHATMSGFSVVKSYCGHGIGELFHCAPNIPH 320
           V+  Y  L +AI   KPG+ ++ IG +I+ + +   FSVV+SY GHG+G+LFH  P +PH
Sbjct: 225 VETCYFSLMEAIKKCKPGMFYKNIGTLIDAYVSKKNFSVVRSYSGHGVGKLFHSNPTVPH 284

Query: 321 Y 321
           +
Sbjct: 285 F 285
>2b3h_A Methionine aminopeptidase 1; hydrolase, metalloprotease, pitab; HET: GOL; 1.10A {Homo sapiens} PDB: 2b3k_A 2b3l_A 2gz5_A* 2nq6_A* 2nq7_A* 2g6p_A* Length = 329 Back     alignment and structure
>3pka_A Methionine aminopeptidase; hydrolase-hydrolase inhibitor complex; HET: Y02; 1.25A {Mycobacterium tuberculosis} PDB: 3pkb_A* 3pkc_A* 3pkd_A* 3pke_A* 3iu7_A* 3iu8_A* 3iu9_A* 1y1n_A 1yj3_A Length = 285 Back     alignment and structure
>3mx6_A Methionine aminopeptidase; seattle structural genomics center for infectious disease, S aminopeptidase, protease, epidermic typhus; 1.70A {Rickettsia prowazekii} PDB: 3mr1_A Length = 262 Back     alignment and structure
>2gg2_A Methionine aminopeptidase; PITA-bread fold, MAP inhibitor, antibacterial, hydrolase; HET: U12; 1.00A {Escherichia coli K12} SCOP: d.127.1.1 PDB: 2gg0_A* 2gg3_A* 2gg5_A* 2gg7_A* 2gg8_A* 2gg9_A* 2ggb_A* 2ggc_A 2q93_A* 2q95_A* 2q96_A* 1xnz_A* 1mat_A* 2bb7_A* 2evc_A* 2evm_A* 2evo_A* 3mat_A* 1yvm_A* 2mat_A ... Length = 263 Back     alignment and structure
>1qxy_A Methionyl aminopeptidase; PITA bread fold, hydrolase; HET: M2C; 1.04A {Staphylococcus aureus} SCOP: d.127.1.1 PDB: 1qxw_A* 1qxz_A* Length = 252 Back     alignment and structure
>3tb5_A Methionine aminopeptidase; hydrolase, metalloprotease, enter feacalis; HET: CIT; 2.30A {Enterococcus faecalis} Length = 264 Back     alignment and structure
>1o0x_A Methionine aminopeptidase; TM1478, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.90A {Thermotoga maritima} SCOP: d.127.1.1 Length = 262 Back     alignment and structure
>3tav_A Methionine aminopeptidase; ssgcid, seattle structural genomics center for infectious DI protease, hydrolase; 2.15A {Mycobacterium abscessus} Length = 286 Back     alignment and structure
>1xgs_A Methionine aminopeptidase; hyperthermophIle; 1.75A {Pyrococcus furiosus} SCOP: a.4.5.25 d.127.1.1 PDB: 1xgm_A 1xgn_A 1xgo_A 1wkm_A 2dfi_A Length = 295 Back     alignment and structure
>2q8k_A Proliferation-associated protein 2G4; EBP1, PA2G4, methionine aminopeptidase, PITA-bread, transcri; 1.60A {Homo sapiens} PDB: 2v6c_A Length = 401 Back     alignment and structure
>1b6a_A Methionine aminopeptidase; angiogenesis inhibitor; HET: TN4; 1.60A {Homo sapiens} SCOP: a.4.5.25 d.127.1.1 PDB: 1qzy_A* 1boa_A* 1kq0_A 1kq9_A 1bn5_A* 1b59_A* 1yw9_A* 1r5g_A* 1r5h_A* 1r58_A* 1yw8_A* 1yw7_A* 2adu_A* 2ea2_A* 2ea4_A* 2ga2_A* 2oaz_A* Length = 478 Back     alignment and structure
>1kp0_A Creatine amidinohydrolase; alpha betal, 3-layer(ABA) sandwich; 2.70A {Actinobacillus} SCOP: c.55.2.1 d.127.1.1 Length = 402 Back     alignment and structure
>1chm_A Creatine amidinohydrolase; creatinase; 1.90A {Pseudomonas putida} SCOP: c.55.2.1 d.127.1.1 Length = 401 Back     alignment and structure
>1wy2_A XAA-Pro dipeptidase; structural genomics, prolidase, riken structural genomics/PR initiative, RSGI, hydrolase; 1.70A {Pyrococcus horikoshii} PDB: 1pv9_A Length = 351 Back     alignment and structure
>1wn1_A Dipeptidase; prolidase, cobalt(II), structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; 2.25A {Pyrococcus horikoshii} PDB: 2how_A Length = 356 Back     alignment and structure
>2zsg_A Aminopeptidase P, putative; hydrolase; 1.65A {Thermotoga maritima} Length = 359 Back     alignment and structure
>3q6d_A Proline dipeptidase; structural genomics, csgid, center for structural genomics O infectious diseases, aminopeptidase, viral protein; 1.97A {Bacillus anthracis} Length = 356 Back     alignment and structure
>4ege_A Dipeptidase PEPE; structural genomics, seattle structural genomics center for infectious disease, ssgcid, hydrolase; 2.20A {Mycobacterium ulcerans} Length = 378 Back     alignment and structure
>4b28_A Metallopeptidase, family M24, putative; lyase, imethylsulfonioproionate, acrylate, dimethylsulfide; 2.15A {Roseobacter denitrificans och 114} Length = 470 Back     alignment and structure
>4b28_A Metallopeptidase, family M24, putative; lyase, imethylsulfonioproionate, acrylate, dimethylsulfide; 2.15A {Roseobacter denitrificans och 114} Length = 470 Back     alignment and structure
>3biq_A FACT complex subunit SPT16; PITA-bread, aminopeptidase, chromatin, replication, AC chromosomal protein, DNA damage, DNA repair; 1.73A {Saccharomyces cerevisiae} PDB: 3bip_A 3bit_A* Length = 467 Back     alignment and structure
>3cb6_A FACT complex subunit SPT16; peptidase homology domain, histone binding module, histone H chaperone, PITA-bread fold; 1.84A {Schizosaccharomyces pombe} PDB: 3cb5_A Length = 444 Back     alignment and structure
>3ig4_A XAA-Pro aminopeptidase; csgid, hydrolase, struct genomics, center for structural genomics of infectious DISE; HET: SO4; 2.89A {Bacillus anthracis} Length = 427 Back     alignment and structure
>3l24_A XAA-Pro dipeptidase; PITA-bread, detoxification, hydrolase, manganese, metal-binding, metalloprotease, protease; 2.30A {Alteromonas SP} PDB: 3l7g_A* Length = 517 Back     alignment and structure
>2iw2_A XAA-Pro dipeptidase; metallocarboxypeptidase, disease mutation, XAA-Pro dipeptida dipeptidase, peptidase D, collagen degradation; 1.82A {Homo sapiens} PDB: 2okn_A Length = 494 Back     alignment and structure
>2v3z_A XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proline- specific enzyme, aminopeptidas manganese enzyme, protease, manganese; HET: CSO; 1.56A {Escherichia coli} SCOP: c.55.2.1 d.127.1.1 PDB: 2bwy_A* 1wl9_A 1m35_A 1n51_A* 1w2m_A 1a16_A 1wbq_A 1wl6_A* 1w7v_A 1wlr_A* 2bh3_A* 2bha_A* 2bhb_A* 2bhc_A* 2bhd_A* 2bn7_A* 1jaw_A 2bwt_A* 2bwu_A* 2bww_A* ... Length = 440 Back     alignment and structure
>3rva_A Organophosphorus acid anhydrolase; PITA-bread fold, binuclea center, BI-functional, prolidase, nerve agents, XAA-Pro DIP hydrolase; 1.80A {Alteromonas macleodii} Length = 451 Back     alignment and structure
>2dj8_A Protein CBFA2T1; zinc finger MYND domain, protein MTG8, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.85.1.1 Length = 60 Back     alignment and structure
>2jw6_A Deformed epidermal autoregulatory factor 1 homolo; zinc binding domain, transcription, alternative splicing, DI mutation, DNA-binding; NMR {Homo sapiens} SCOP: g.85.1.1 Length = 52 Back     alignment and structure
>2d8q_A BLU protein, zinc finger MYND domain containing protein 10; zmynd10, ZF-MYND, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.85.1.1 PDB: 2dan_A Length = 70 Back     alignment and structure
>2od1_A Protein CBFA2T1; zinc finger, cross-braced topology, metal binding protein; NMR {Homo sapiens} Length = 60 Back     alignment and structure
>2odd_A Protein CBFA2T1; MYND zinc finger, cross-braced topology, poly-proline, proline-tryptophan interaction, metal binding protein; NMR {Homo sapiens} Length = 64 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query349
3s6b_A368 Methionine aminopeptidase; malaria, proteolysis, " 100.0
2b3h_A329 Methionine aminopeptidase 1; hydrolase, metallopro 100.0
4fuk_A337 Methionine aminopeptidase; structural genomics con 100.0
3pka_A285 Methionine aminopeptidase; hydrolase-hydrolase inh 100.0
3tb5_A264 Methionine aminopeptidase; hydrolase, metalloprote 100.0
3mx6_A262 Methionine aminopeptidase; seattle structural geno 100.0
3tav_A286 Methionine aminopeptidase; ssgcid, seattle structu 100.0
1o0x_A262 Methionine aminopeptidase; TM1478, structural geno 100.0
2gg2_A263 Methionine aminopeptidase; PITA-bread fold, MAP in 100.0
1qxy_A252 Methionyl aminopeptidase; PITA bread fold, hydrola 100.0
3q6d_A356 Proline dipeptidase; structural genomics, csgid, c 100.0
2zsg_A359 Aminopeptidase P, putative; hydrolase; 1.65A {Ther 100.0
1wy2_A351 XAA-Pro dipeptidase; structural genomics, prolidas 100.0
4ege_A378 Dipeptidase PEPE; structural genomics, seattle str 100.0
1wn1_A356 Dipeptidase; prolidase, cobalt(II), structural gen 100.0
4fkc_A377 XAA-Pro aminopeptidase; PITA-bread structure, prol 100.0
3ig4_A427 XAA-Pro aminopeptidase; csgid, hydrolase, struct g 100.0
2q8k_A 401 Proliferation-associated protein 2G4; EBP1, PA2G4, 100.0
2v3z_A440 XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proli 100.0
3rva_A451 Organophosphorus acid anhydrolase; PITA-bread fold 100.0
1xgs_A295 Methionine aminopeptidase; hyperthermophIle; 1.75A 100.0
1kp0_A402 Creatine amidinohydrolase; alpha betal, 3-layer(AB 100.0
3l24_A 517 XAA-Pro dipeptidase; PITA-bread, detoxification, h 100.0
1chm_A401 Creatine amidinohydrolase; creatinase; 1.90A {Pseu 100.0
2nw5_A 360 Methionine aminopeptidase 2; metap2, structural ge 100.0
2iw2_A494 XAA-Pro dipeptidase; metallocarboxypeptidase, dise 100.0
3biq_A467 FACT complex subunit SPT16; PITA-bread, aminopepti 100.0
3cb6_A444 FACT complex subunit SPT16; peptidase homology dom 100.0
4b28_A470 Metallopeptidase, family M24, putative; lyase, ime 100.0
3fm3_A 358 Methionine aminopeptidase 2; metap2, structural ge 100.0
1b6a_A 478 Methionine aminopeptidase; angiogenesis inhibitor; 100.0
3ctz_A623 XAA-Pro aminopeptidase 1; PITA-bread fold, alterna 100.0
4b6a_t 614 Probable metalloprotease ARX1; large ribosomal sub 99.83
2dj8_A60 Protein CBFA2T1; zinc finger MYND domain, protein 97.93
2jw6_A52 Deformed epidermal autoregulatory factor 1 homolo; 97.92
2od1_A60 Protein CBFA2T1; zinc finger, cross-braced topolog 97.87
2d8q_A70 BLU protein, zinc finger MYND domain containing pr 97.86
2odd_A64 Protein CBFA2T1; MYND zinc finger, cross-braced to 97.66
3q6d_A356 Proline dipeptidase; structural genomics, csgid, c 96.67
4ege_A378 Dipeptidase PEPE; structural genomics, seattle str 96.65
1wn1_A356 Dipeptidase; prolidase, cobalt(II), structural gen 96.5
3pka_A285 Methionine aminopeptidase; hydrolase-hydrolase inh 96.44
1wy2_A351 XAA-Pro dipeptidase; structural genomics, prolidas 96.4
1o0x_A262 Methionine aminopeptidase; TM1478, structural geno 96.4
2zsg_A359 Aminopeptidase P, putative; hydrolase; 1.65A {Ther 96.39
3mx6_A262 Methionine aminopeptidase; seattle structural geno 96.32
3tb5_A264 Methionine aminopeptidase; hydrolase, metalloprote 96.19
3qww_A433 SET and MYND domain-containing protein 2; methyltr 96.12
4fkc_A377 XAA-Pro aminopeptidase; PITA-bread structure, prol 96.09
2gg2_A263 Methionine aminopeptidase; PITA-bread fold, MAP in 96.07
3qwp_A429 SET and MYND domain-containing protein 3; SMYD3,SE 96.06
3tav_A286 Methionine aminopeptidase; ssgcid, seattle structu 96.01
1qxy_A252 Methionyl aminopeptidase; PITA bread fold, hydrola 95.92
3cb6_A444 FACT complex subunit SPT16; peptidase homology dom 95.92
3fm3_A 358 Methionine aminopeptidase 2; metap2, structural ge 95.83
3n71_A 490 Histone lysine methyltransferase SMYD1; heart deve 95.72
3biq_A467 FACT complex subunit SPT16; PITA-bread, aminopepti 95.67
2b3h_A329 Methionine aminopeptidase 1; hydrolase, metallopro 95.67
4fuk_A 337 Methionine aminopeptidase; structural genomics con 95.67
3s6b_A368 Methionine aminopeptidase; malaria, proteolysis, " 95.63
2v3z_A440 XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proli 95.63
1kp0_A402 Creatine amidinohydrolase; alpha betal, 3-layer(AB 95.49
3ig4_A427 XAA-Pro aminopeptidase; csgid, hydrolase, struct g 95.38
1chm_A401 Creatine amidinohydrolase; creatinase; 1.90A {Pseu 94.88
1xgs_A295 Methionine aminopeptidase; hyperthermophIle; 1.75A 94.61
2yqq_A56 Zinc finger HIT domain-containing protein 3; struc 93.7
3rva_A451 Organophosphorus acid anhydrolase; PITA-bread fold 93.67
2q8k_A401 Proliferation-associated protein 2G4; EBP1, PA2G4, 92.99
2nw5_A 360 Methionine aminopeptidase 2; metap2, structural ge 92.92
3l24_A517 XAA-Pro dipeptidase; PITA-bread, detoxification, h 92.24
1x4s_A59 Protein FON, zinc finger HIT domain containing pro 91.82
3ctz_A623 XAA-Pro aminopeptidase 1; PITA-bread fold, alterna 91.68
4b28_A470 Metallopeptidase, family M24, putative; lyase, ime 91.62
1b6a_A478 Methionine aminopeptidase; angiogenesis inhibitor; 91.37
2iw2_A494 XAA-Pro dipeptidase; metallocarboxypeptidase, dise 90.93
>3s6b_A Methionine aminopeptidase; malaria, proteolysis, "PITA bread" fold, structur genomics, structural genomics consortium, SGC, hydrolase; 1.95A {Plasmodium falciparum} Back     alignment and structure
Probab=100.00  E-value=1.1e-62  Score=477.73  Aligned_cols=267  Identities=44%  Similarity=0.817  Sum_probs=250.1

Q ss_pred             CCccccccchhcccCCCCCCCCCCCcccCccccccCCCCcccCCCCCCCccccCCCCCCCCCCCcccccccCCHHHHHHH
Q 018857           72 SSLVSEGWRYCIKKGQARTPKLPHFDWTGTLRPYPISSKLTVPAYIELPDWALDGTPKVEPNSDLQHVVEIKTPDQIERM  151 (349)
Q Consensus        72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~p~~~~~~~~vp~~i~~p~ya~~g~~~~e~~~~~~~~r~vKs~~EIe~~  151 (349)
                      .++....|.|     ++.+++||+|.|||+||||++||++.||++|++|+|+.+|.|..++.......+.|||++||+.|
T Consensus        38 ~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~vp~~i~~p~y~~~~~~~~~~~~~~~~~~~IKs~~EIe~m  112 (368)
T 3s6b_A           38 DPTNRKYWVY-----DDHLKNFVNFKFTGDVRPWPLSKINHVPSHIERPDYAISSIPESELIYKRKSDIYVNNEEEIQRI  112 (368)
T ss_dssp             CTTCCGGGGG-----STTGGGGTTCCCSSSCCCCCCCCCCCCCTTSCCCTTTTTSCCHHHHSCCCTTCCCCCCHHHHHHH
T ss_pred             CCCCCccccc-----ccccCCCCCCCcCCcccccccCCCCCCCcCCCCCccccCCCChhhhhccccCCceeCCHHHHHHH
Confidence            3445567876     45688999999999999999999999999999999999998877654444568999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceeeecCCCcccccCCCCCCCCCCCEEEE
Q 018857          152 RETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVICHGIPDSRKLEDGDIVNI  231 (349)
Q Consensus       152 R~A~~ia~~~l~~~~~~i~pGvte~Ei~~~~~~~~~~~g~~ps~l~~~~fp~~v~~g~n~~~~H~~p~~r~L~~GDiv~i  231 (349)
                      |+|+++++++++.+++.++||+||.||++.+++++.++|++|++++|.+||+++|+|.|++++|++|++++|++||+|+|
T Consensus       113 R~A~~ia~~al~~~~~~ikpGvTE~El~~~~~~~~~~~Ga~ps~l~y~~Fp~iv~sg~N~~i~H~~p~~r~L~~GDiV~i  192 (368)
T 3s6b_A          113 REACILGRKTLDYAHTLVSPGVTTDEIDRKVHEFIIKNNAYPSTLNYYKFPKSCCTSVNEIVCHGIPDYRPLKSGDIINI  192 (368)
T ss_dssp             HHHHHHHHHHHHHHHHTCCTTCBHHHHHHHHHHHHHHTTCEETTTTGGGCCSSEEEEETTEEECCCCCSCBCCTTCEEEE
T ss_pred             HHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCccccccccCCCCeEEEcCccccccCCCCCccccCCCEEEE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EeeceeCcEEeceeceEeeC---CCCHHHHHHHHHHHHHHHHHHHHcCCCCcHhHHHHHHHHHHHHcCCCcccCcccccC
Q 018857          232 DVTVYYKGVHGDLNETYFVG---NADEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHATMSGFSVVKSYCGHGI  308 (349)
Q Consensus       232 D~g~~~~GY~~D~~RT~~vG---~~~~~~~~l~~~~~ea~~~ai~~~kPG~~~~eI~~ai~~~~~~~G~~~~~~~~GHgI  308 (349)
                      |+|+.|+||++|++|||++|   ++++++++++++++++++++++++|||++++||+++++++++++||..+.+++||||
T Consensus       193 D~G~~~~GY~sDitRT~~vGg~~~~s~e~~~ly~~v~ea~~aai~~ikPG~~~~dI~~aa~~~i~~~G~~~~~~~~GHGI  272 (368)
T 3s6b_A          193 DISVFYKGVHSDLNETYFVGDINDVPKEGKELVETCYFSLMEAIKKCKPGMFYKNIGTLIDAYVSKKNFSVVRSYSGHGV  272 (368)
T ss_dssp             EEEEEETTEEEEEEEEEECSCGGGSCHHHHHHHHHHHHHHHHHHHHCCTTCBTHHHHHHHHHHHHTTTCEECCSCCEEEC
T ss_pred             EEeEEECcEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCcccceeeCCC
Confidence            99999999999999999999   899999999999999999999999999999999999999999999998889999999


Q ss_pred             CCcCccCCCcCCCCC--CCCcccCce-EEEecceEEcC
Q 018857          309 GELFHCAPNIPHYSS--LYHAFQPHI-FYIQKSFYFMD  343 (349)
Q Consensus       309 G~~~he~P~i~~~~~--~~~~Le~GM-ftIEPgly~~~  343 (349)
                      |+.+||.|.|++|.+  +..+|++|| |+|||++|++.
T Consensus       273 G~~vHE~P~i~~~~~~~~~~~L~~GMVfTIEPgiy~~~  310 (368)
T 3s6b_A          273 GKLFHSNPTVPHFKKNKAVGIMKPGHVFTIEPMINQGH  310 (368)
T ss_dssp             SSSSSEEEEECSSSSCCCCCBCCTTCEEEECCEEESSC
T ss_pred             CccccCCCccccccCCCCCCEECCCCEEEEcCeEEcCc
Confidence            999999999998754  356999999 99999999854
>2b3h_A Methionine aminopeptidase 1; hydrolase, metalloprotease, pitab; HET: GOL; 1.10A {Homo sapiens} PDB: 2b3k_A 2b3l_A 2gz5_A* 2nq6_A* 2nq7_A* 2g6p_A* Back     alignment and structure
>4fuk_A Methionine aminopeptidase; structural genomics consortium, SGC, hydrolase; 1.75A {Trypanosoma brucei brucei} Back     alignment and structure
>3pka_A Methionine aminopeptidase; hydrolase-hydrolase inhibitor complex; HET: Y02; 1.25A {Mycobacterium tuberculosis} PDB: 3pkb_A* 3pkc_A* 3pkd_A* 3pke_A* 3iu7_A* 3iu8_A* 3iu9_A* 1y1n_A 1yj3_A 3ror_A Back     alignment and structure
>3tb5_A Methionine aminopeptidase; hydrolase, metalloprotease, enter feacalis; HET: CIT; 2.30A {Enterococcus faecalis} Back     alignment and structure
>3mx6_A Methionine aminopeptidase; seattle structural genomics center for infectious disease, S aminopeptidase, protease, epidermic typhus; 1.70A {Rickettsia prowazekii} PDB: 3mr1_A Back     alignment and structure
>3tav_A Methionine aminopeptidase; ssgcid, seattle structural genomics center for infectious DI protease, hydrolase; 2.15A {Mycobacterium abscessus} Back     alignment and structure
>1o0x_A Methionine aminopeptidase; TM1478, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.90A {Thermotoga maritima} SCOP: d.127.1.1 Back     alignment and structure
>2gg2_A Methionine aminopeptidase; PITA-bread fold, MAP inhibitor, antibacterial, hydrolase; HET: U12; 1.00A {Escherichia coli K12} SCOP: d.127.1.1 PDB: 2gg0_A* 2gg3_A* 2gg5_A* 2gg7_A* 2gg8_A* 2gg9_A* 2ggb_A* 2ggc_A 2q93_A* 2q95_A* 2q96_A* 1xnz_A* 1mat_A* 2bb7_A* 2evc_A* 2evm_A* 2evo_A* 3mat_A* 1yvm_A* 2mat_A ... Back     alignment and structure
>1qxy_A Methionyl aminopeptidase; PITA bread fold, hydrolase; HET: M2C; 1.04A {Staphylococcus aureus} SCOP: d.127.1.1 PDB: 1qxw_A* 1qxz_A* Back     alignment and structure
>3q6d_A Proline dipeptidase; structural genomics, csgid, center for structural genomics O infectious diseases, aminopeptidase, viral protein; 1.97A {Bacillus anthracis} Back     alignment and structure
>2zsg_A Aminopeptidase P, putative; hydrolase; 1.65A {Thermotoga maritima} Back     alignment and structure
>1wy2_A XAA-Pro dipeptidase; structural genomics, prolidase, riken structural genomics/PR initiative, RSGI, hydrolase; 1.70A {Pyrococcus horikoshii} PDB: 1pv9_A Back     alignment and structure
>4ege_A Dipeptidase PEPE; structural genomics, seattle structural genomics center for infectious disease, ssgcid, hydrolase; 2.20A {Mycobacterium ulcerans} Back     alignment and structure
>1wn1_A Dipeptidase; prolidase, cobalt(II), structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; 2.25A {Pyrococcus horikoshii} PDB: 2how_A Back     alignment and structure
>4fkc_A XAA-Pro aminopeptidase; PITA-bread structure, prolidase, hydrolase; 2.60A {Thermococcus sibiricus} Back     alignment and structure
>3ig4_A XAA-Pro aminopeptidase; csgid, hydrolase, struct genomics, center for structural genomics of infectious DISE; HET: SO4; 2.89A {Bacillus anthracis} Back     alignment and structure
>2q8k_A Proliferation-associated protein 2G4; EBP1, PA2G4, methionine aminopeptidase, PITA-bread, transcri; 1.60A {Homo sapiens} PDB: 2v6c_A Back     alignment and structure
>2v3z_A XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proline- specific enzyme, aminopeptidas manganese enzyme, protease, manganese; HET: CSO; 1.56A {Escherichia coli} SCOP: c.55.2.1 d.127.1.1 PDB: 2bwy_A* 1wl9_A 1m35_A 1n51_A* 1w2m_A 1a16_A 1wbq_A 1wl6_A* 1w7v_A 1wlr_A* 2bh3_A* 2bha_A* 2bhb_A* 2bhc_A* 2bhd_A* 2bn7_A* 1jaw_A 2bwt_A* 2bwu_A* 2bww_A* ... Back     alignment and structure
>3rva_A Organophosphorus acid anhydrolase; PITA-bread fold, binuclea center, BI-functional, prolidase, nerve agents, XAA-Pro DIP hydrolase; 1.80A {Alteromonas macleodii} Back     alignment and structure
>1xgs_A Methionine aminopeptidase; hyperthermophIle; 1.75A {Pyrococcus furiosus} SCOP: a.4.5.25 d.127.1.1 PDB: 1xgm_A 1xgn_A 1xgo_A 1wkm_A 2dfi_A Back     alignment and structure
>1kp0_A Creatine amidinohydrolase; alpha betal, 3-layer(ABA) sandwich; 2.70A {Actinobacillus} SCOP: c.55.2.1 d.127.1.1 Back     alignment and structure
>3l24_A XAA-Pro dipeptidase; PITA-bread, detoxification, hydrolase, manganese, metal-binding, metalloprotease, protease; 2.30A {Alteromonas SP} PDB: 3l7g_A* Back     alignment and structure
>1chm_A Creatine amidinohydrolase; creatinase; 1.90A {Pseudomonas putida} SCOP: c.55.2.1 d.127.1.1 Back     alignment and structure
>2iw2_A XAA-Pro dipeptidase; metallocarboxypeptidase, disease mutation, XAA-Pro dipeptida dipeptidase, peptidase D, collagen degradation; 1.82A {Homo sapiens} PDB: 2okn_A Back     alignment and structure
>3biq_A FACT complex subunit SPT16; PITA-bread, aminopeptidase, chromatin, replication, AC chromosomal protein, DNA damage, DNA repair; 1.73A {Saccharomyces cerevisiae} PDB: 3bip_A 3bit_A* Back     alignment and structure
>3cb6_A FACT complex subunit SPT16; peptidase homology domain, histone binding module, histone H chaperone, PITA-bread fold; 1.84A {Schizosaccharomyces pombe} PDB: 3cb5_A Back     alignment and structure
>4b28_A Metallopeptidase, family M24, putative; lyase, imethylsulfonioproionate, acrylate, dimethylsulfide; 2.15A {Roseobacter denitrificans och 114} Back     alignment and structure
>3fm3_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3fmq_A* 3fmr_A* Back     alignment and structure
>1b6a_A Methionine aminopeptidase; angiogenesis inhibitor; HET: TN4; 1.60A {Homo sapiens} SCOP: a.4.5.25 d.127.1.1 PDB: 1qzy_A* 1boa_A* 1kq0_A 1kq9_A 1bn5_A* 1b59_A* 1yw9_A* 1r5g_A* 1r5h_A* 1r58_A* 1yw8_A* 1yw7_A* 2adu_A* 2ea2_A* 2ea4_A* 2ga2_A* 2oaz_A* Back     alignment and structure
>3ctz_A XAA-Pro aminopeptidase 1; PITA-bread fold, alternative splicing, cytoplasm, hydrolase, manganese, metal-binding, metalloprotease, protease; HET: P6G; 1.60A {Homo sapiens} Back     alignment and structure
>4b6a_t Probable metalloprotease ARX1; large ribosomal subunit, ribosome biogenesis, ribosome matur factor, ribosome; 8.10A {Saccharomyces cerevisiae} Back     alignment and structure
>2dj8_A Protein CBFA2T1; zinc finger MYND domain, protein MTG8, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.85.1.1 Back     alignment and structure
>2jw6_A Deformed epidermal autoregulatory factor 1 homolo; zinc binding domain, transcription, alternative splicing, DI mutation, DNA-binding; NMR {Homo sapiens} SCOP: g.85.1.1 Back     alignment and structure
>2od1_A Protein CBFA2T1; zinc finger, cross-braced topology, metal binding protein; NMR {Homo sapiens} Back     alignment and structure
>2d8q_A BLU protein, zinc finger MYND domain containing protein 10; zmynd10, ZF-MYND, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.85.1.1 PDB: 2dan_A Back     alignment and structure
>2odd_A Protein CBFA2T1; MYND zinc finger, cross-braced topology, poly-proline, proline-tryptophan interaction, metal binding protein; NMR {Homo sapiens} Back     alignment and structure
>3q6d_A Proline dipeptidase; structural genomics, csgid, center for structural genomics O infectious diseases, aminopeptidase, viral protein; 1.97A {Bacillus anthracis} Back     alignment and structure
>4ege_A Dipeptidase PEPE; structural genomics, seattle structural genomics center for infectious disease, ssgcid, hydrolase; 2.20A {Mycobacterium ulcerans} Back     alignment and structure
>1wn1_A Dipeptidase; prolidase, cobalt(II), structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; 2.25A {Pyrococcus horikoshii} PDB: 2how_A Back     alignment and structure
>3pka_A Methionine aminopeptidase; hydrolase-hydrolase inhibitor complex; HET: Y02; 1.25A {Mycobacterium tuberculosis} PDB: 3pkb_A* 3pkc_A* 3pkd_A* 3pke_A* 3iu7_A* 3iu8_A* 3iu9_A* 1y1n_A 1yj3_A 3ror_A Back     alignment and structure
>1wy2_A XAA-Pro dipeptidase; structural genomics, prolidase, riken structural genomics/PR initiative, RSGI, hydrolase; 1.70A {Pyrococcus horikoshii} PDB: 1pv9_A Back     alignment and structure
>1o0x_A Methionine aminopeptidase; TM1478, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.90A {Thermotoga maritima} SCOP: d.127.1.1 Back     alignment and structure
>2zsg_A Aminopeptidase P, putative; hydrolase; 1.65A {Thermotoga maritima} Back     alignment and structure
>3mx6_A Methionine aminopeptidase; seattle structural genomics center for infectious disease, S aminopeptidase, protease, epidermic typhus; 1.70A {Rickettsia prowazekii} PDB: 3mr1_A Back     alignment and structure
>3tb5_A Methionine aminopeptidase; hydrolase, metalloprotease, enter feacalis; HET: CIT; 2.30A {Enterococcus faecalis} Back     alignment and structure
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A* Back     alignment and structure
>4fkc_A XAA-Pro aminopeptidase; PITA-bread structure, prolidase, hydrolase; 2.60A {Thermococcus sibiricus} Back     alignment and structure
>2gg2_A Methionine aminopeptidase; PITA-bread fold, MAP inhibitor, antibacterial, hydrolase; HET: U12; 1.00A {Escherichia coli K12} SCOP: d.127.1.1 PDB: 2gg0_A* 2gg3_A* 2gg5_A* 2gg7_A* 2gg8_A* 2gg9_A* 2ggb_A* 2ggc_A 2q93_A* 2q95_A* 2q96_A* 1xnz_A* 1mat_A* 2bb7_A* 2evc_A* 2evm_A* 2evo_A* 3mat_A* 1yvm_A* 2mat_A ... Back     alignment and structure
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A* Back     alignment and structure
>3tav_A Methionine aminopeptidase; ssgcid, seattle structural genomics center for infectious DI protease, hydrolase; 2.15A {Mycobacterium abscessus} Back     alignment and structure
>1qxy_A Methionyl aminopeptidase; PITA bread fold, hydrolase; HET: M2C; 1.04A {Staphylococcus aureus} SCOP: d.127.1.1 PDB: 1qxw_A* 1qxz_A* Back     alignment and structure
>3cb6_A FACT complex subunit SPT16; peptidase homology domain, histone binding module, histone H chaperone, PITA-bread fold; 1.84A {Schizosaccharomyces pombe} PDB: 3cb5_A Back     alignment and structure
>3fm3_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3fmq_A* 3fmr_A* Back     alignment and structure
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus} Back     alignment and structure
>3biq_A FACT complex subunit SPT16; PITA-bread, aminopeptidase, chromatin, replication, AC chromosomal protein, DNA damage, DNA repair; 1.73A {Saccharomyces cerevisiae} PDB: 3bip_A 3bit_A* Back     alignment and structure
>2b3h_A Methionine aminopeptidase 1; hydrolase, metalloprotease, pitab; HET: GOL; 1.10A {Homo sapiens} PDB: 2b3k_A 2b3l_A 2gz5_A* 2nq6_A* 2nq7_A* 2g6p_A* Back     alignment and structure
>4fuk_A Methionine aminopeptidase; structural genomics consortium, SGC, hydrolase; 1.75A {Trypanosoma brucei brucei} Back     alignment and structure
>3s6b_A Methionine aminopeptidase; malaria, proteolysis, "PITA bread" fold, structur genomics, structural genomics consortium, SGC, hydrolase; 1.95A {Plasmodium falciparum} Back     alignment and structure
>2v3z_A XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proline- specific enzyme, aminopeptidas manganese enzyme, protease, manganese; HET: CSO; 1.56A {Escherichia coli} SCOP: c.55.2.1 d.127.1.1 PDB: 2bwy_A* 1wl9_A 1m35_A 1n51_A* 1w2m_A 1a16_A 1wbq_A 1wl6_A* 1w7v_A 1wlr_A* 2bh3_A* 2bha_A* 2bhb_A* 2bhc_A* 2bhd_A* 2bn7_A* 1jaw_A 2bwt_A* 2bwu_A* 2bww_A* ... Back     alignment and structure
>1kp0_A Creatine amidinohydrolase; alpha betal, 3-layer(ABA) sandwich; 2.70A {Actinobacillus} SCOP: c.55.2.1 d.127.1.1 Back     alignment and structure
>3ig4_A XAA-Pro aminopeptidase; csgid, hydrolase, struct genomics, center for structural genomics of infectious DISE; HET: SO4; 2.89A {Bacillus anthracis} Back     alignment and structure
>1chm_A Creatine amidinohydrolase; creatinase; 1.90A {Pseudomonas putida} SCOP: c.55.2.1 d.127.1.1 Back     alignment and structure
>1xgs_A Methionine aminopeptidase; hyperthermophIle; 1.75A {Pyrococcus furiosus} SCOP: a.4.5.25 d.127.1.1 PDB: 1xgm_A 1xgn_A 1xgo_A 1wkm_A 2dfi_A Back     alignment and structure
>2yqq_A Zinc finger HIT domain-containing protein 3; structure genomics, ZF-HIT domain, TRIP-3, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>3rva_A Organophosphorus acid anhydrolase; PITA-bread fold, binuclea center, BI-functional, prolidase, nerve agents, XAA-Pro DIP hydrolase; 1.80A {Alteromonas macleodii} Back     alignment and structure
>2q8k_A Proliferation-associated protein 2G4; EBP1, PA2G4, methionine aminopeptidase, PITA-bread, transcri; 1.60A {Homo sapiens} PDB: 2v6c_A Back     alignment and structure
>3l24_A XAA-Pro dipeptidase; PITA-bread, detoxification, hydrolase, manganese, metal-binding, metalloprotease, protease; 2.30A {Alteromonas SP} PDB: 3l7g_A* Back     alignment and structure
>1x4s_A Protein FON, zinc finger HIT domain containing protein 2; structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.85.1.2 Back     alignment and structure
>3ctz_A XAA-Pro aminopeptidase 1; PITA-bread fold, alternative splicing, cytoplasm, hydrolase, manganese, metal-binding, metalloprotease, protease; HET: P6G; 1.60A {Homo sapiens} Back     alignment and structure
>4b28_A Metallopeptidase, family M24, putative; lyase, imethylsulfonioproionate, acrylate, dimethylsulfide; 2.15A {Roseobacter denitrificans och 114} Back     alignment and structure
>1b6a_A Methionine aminopeptidase; angiogenesis inhibitor; HET: TN4; 1.60A {Homo sapiens} SCOP: a.4.5.25 d.127.1.1 PDB: 1qzy_A* 1boa_A* 1kq0_A 1kq9_A 1bn5_A* 1b59_A* 1yw9_A* 1r5g_A* 1r5h_A* 1r58_A* 1yw8_A* 1yw7_A* 2adu_A* 2ea2_A* 2ea4_A* 2ga2_A* 2oaz_A* Back     alignment and structure
>2iw2_A XAA-Pro dipeptidase; metallocarboxypeptidase, disease mutation, XAA-Pro dipeptida dipeptidase, peptidase D, collagen degradation; 1.82A {Homo sapiens} PDB: 2okn_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 349
d2gg2a1262 d.127.1.1 (A:3-264) Methionine aminopeptidase {Esc 3e-44
d1o0xa_249 d.127.1.1 (A:) Methionine aminopeptidase {Thermoto 7e-36
d1pv9a2221 d.127.1.1 (A:125-345) Aminopeptidase P, C-terminal 7e-25
d1b6aa2295 d.127.1.1 (A:110-374,A:449-478) Methionine aminope 1e-23
d1qxya_249 d.127.1.1 (A:) Methionine aminopeptidase {Staphylo 8e-22
d2v3za2264 d.127.1.1 (A:177-440) Aminopeptidase P, C-terminal 6e-21
d1chma2246 d.127.1.1 (A:157-402) Creatinase, catalytic (C-ter 1e-19
d1xgsa2218 d.127.1.1 (A:1-194,A:272-295) Methionine aminopept 7e-17
d2dj8a147 g.85.1.1 (A:8-54) Zinc finger MYND domain-containi 9e-06
d2jw6a138 g.85.1.1 (A:503-540) Zinc finger MYND domain-conta 2e-05
d2dana147 g.85.1.1 (A:8-54) Zinc finger MYND domain-containi 3e-04
>d2gg2a1 d.127.1.1 (A:3-264) Methionine aminopeptidase {Escherichia coli [TaxId: 562]} Length = 262 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: Creatinase/aminopeptidase
superfamily: Creatinase/aminopeptidase
family: Creatinase/aminopeptidase
domain: Methionine aminopeptidase
species: Escherichia coli [TaxId: 562]

 Score =  150 bits (380), Expect = 3e-44
 Identities = 85/189 (44%), Positives = 116/189 (61%), Gaps = 2/189 (1%)

Query: 140 VEIKTPDQIERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYH 199
           + IKTP+ IE+MR   R+A EVL+     ++PGV+T E+DR+ ++  +      S    +
Sbjct: 1   ISIKTPEDIEKMRVAGRLAAEVLEMIEPYVKPGVSTGELDRICNDYIVNEQHAVSACLGY 60

Query: 200 F-FPKSCCTSVNEVICHGIP-DSRKLEDGDIVNIDVTVYYKGVHGDLNETYFVGNADEAS 257
             +PKS C S+NEV+CHGIP D++ L+DGDIVNIDVTV   G HGD ++ + VG      
Sbjct: 61  HGYPKSVCISINEVVCHGIPDDAKLLKDGDIVNIDVTVIKDGFHGDTSKMFIVGKPTIMG 120

Query: 258 RQLVQCTYECLEKAISIVKPGVRFREIGEVINRHATMSGFSVVKSYCGHGIGELFHCAPN 317
            +L + T E L  A+ +VKPG+  REIG  I +     GFSVV+ YCGHGIG  FH  P 
Sbjct: 121 ERLCRITQESLYLALRMVKPGINLREIGAAIQKFVEAEGFSVVREYCGHGIGRGFHEEPQ 180

Query: 318 IPHYSSLYH 326
           + HY S   
Sbjct: 181 VLHYDSRET 189
>d1o0xa_ d.127.1.1 (A:) Methionine aminopeptidase {Thermotoga maritima [TaxId: 2336]} Length = 249 Back     information, alignment and structure
>d1pv9a2 d.127.1.1 (A:125-345) Aminopeptidase P, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]} Length = 221 Back     information, alignment and structure
>d1b6aa2 d.127.1.1 (A:110-374,A:449-478) Methionine aminopeptidase {Human (Homo sapiens) [TaxId: 9606]} Length = 295 Back     information, alignment and structure
>d1qxya_ d.127.1.1 (A:) Methionine aminopeptidase {Staphylococcus aureus [TaxId: 1280]} Length = 249 Back     information, alignment and structure
>d2v3za2 d.127.1.1 (A:177-440) Aminopeptidase P, C-terminal domain {Escherichia coli [TaxId: 562]} Length = 264 Back     information, alignment and structure
>d1chma2 d.127.1.1 (A:157-402) Creatinase, catalytic (C-terminal) domain {Pseudomonas putida [TaxId: 303]} Length = 246 Back     information, alignment and structure
>d1xgsa2 d.127.1.1 (A:1-194,A:272-295) Methionine aminopeptidase {Archaeon Pyrococcus furiosus [TaxId: 2261]} Length = 218 Back     information, alignment and structure
>d2dj8a1 g.85.1.1 (A:8-54) Zinc finger MYND domain-containing protein 2, MTG8 {Human (Homo sapiens) [TaxId: 9606]} Length = 47 Back     information, alignment and structure
>d2jw6a1 g.85.1.1 (A:503-540) Zinc finger MYND domain-containing protein 2, MTG8 {Human (Homo sapiens) [TaxId: 9606]} Length = 38 Back     information, alignment and structure
>d2dana1 g.85.1.1 (A:8-54) Zinc finger MYND domain-containing protein 10, ZMYND10 {Human (Homo sapiens) [TaxId: 9606]} Length = 47 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query349
d1o0xa_249 Methionine aminopeptidase {Thermotoga maritima [Ta 100.0
d1pv9a2221 Aminopeptidase P, C-terminal domain {Archaeon Pyro 100.0
d1qxya_249 Methionine aminopeptidase {Staphylococcus aureus [ 100.0
d2gg2a1262 Methionine aminopeptidase {Escherichia coli [TaxId 100.0
d1chma2246 Creatinase, catalytic (C-terminal) domain {Pseudom 100.0
d1xgsa2218 Methionine aminopeptidase {Archaeon Pyrococcus fur 100.0
d2v3za2264 Aminopeptidase P, C-terminal domain {Escherichia c 100.0
d1b6aa2295 Methionine aminopeptidase {Human (Homo sapiens) [T 100.0
d2dana147 Zinc finger MYND domain-containing protein 10, ZMY 98.56
d2dj8a147 Zinc finger MYND domain-containing protein 2, MTG8 98.44
d2jw6a138 Zinc finger MYND domain-containing protein 2, MTG8 98.36
d1pv9a2221 Aminopeptidase P, C-terminal domain {Archaeon Pyro 97.21
d2gg2a1262 Methionine aminopeptidase {Escherichia coli [TaxId 96.42
d1chma2246 Creatinase, catalytic (C-terminal) domain {Pseudom 96.33
d1xgsa2218 Methionine aminopeptidase {Archaeon Pyrococcus fur 96.32
d1qxya_249 Methionine aminopeptidase {Staphylococcus aureus [ 95.41
d1o0xa_249 Methionine aminopeptidase {Thermotoga maritima [Ta 95.31
d2v3za2 264 Aminopeptidase P, C-terminal domain {Escherichia c 94.49
d1b6aa2 295 Methionine aminopeptidase {Human (Homo sapiens) [T 93.75
d1lv3a_65 Hypothetical zinc finger protein YacG {Escherichia 87.42
d1x4sa146 Zinc finger HIT domain containing protein 2, ZNHIT 80.04
>d1o0xa_ d.127.1.1 (A:) Methionine aminopeptidase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Creatinase/aminopeptidase
superfamily: Creatinase/aminopeptidase
family: Creatinase/aminopeptidase
domain: Methionine aminopeptidase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=3e-43  Score=321.75  Aligned_cols=207  Identities=33%  Similarity=0.597  Sum_probs=192.2

Q ss_pred             ccccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceeeecCCCcccccCC
Q 018857          139 VVEIKTPDQIERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVICHGIP  218 (349)
Q Consensus       139 ~r~vKs~~EIe~~R~A~~ia~~~l~~~~~~i~pGvte~Ei~~~~~~~~~~~g~~ps~l~~~~fp~~v~~g~n~~~~H~~p  218 (349)
                      ||.||||+||+.||+|+++++++++++.+.++||+||.||++.+++.+.+.|+.+.+.++..++..++.+.++...|+.+
T Consensus         1 m~~IKs~~Ei~~mr~A~~ia~~~~~~~~~~i~~G~te~ev~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (249)
T d1o0xa_           1 MIRIKTPSEIEKMKKAGKAVAVALREVRKVIVPGKTAWDVETLVLEIFKKLRVKPAFKGYGGYKYATCVSVNEEVVHGLP   80 (249)
T ss_dssp             CCCCCCHHHHHHHHHHHHHHHHHHHHGGGGCSTTCBHHHHHHHHHHHHHHHTCEESSTTGGGCCCSEEEEETTBCSCCCC
T ss_pred             CCccCCHHHHHHHHHHHHHHHHHHHHHHHHCcCCCCHHHHHHHHHHHHHHhhhhhhccccccccccccccCcccccceee
Confidence            68999999999999999999999999999999999999999999999999999888777777888888888888887765


Q ss_pred             -CCCCCCCCCEEEEEeeceeCcEEeceeceEeeCCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHhHHHHHHHHHHHHcCC
Q 018857          219 -DSRKLEDGDIVNIDVTVYYKGVHGDLNETYFVGNADEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHATMSGF  297 (349)
Q Consensus       219 -~~r~L~~GDiv~iD~g~~~~GY~~D~~RT~~vG~~~~~~~~l~~~~~ea~~~ai~~~kPG~~~~eI~~ai~~~~~~~G~  297 (349)
                       +++++++||+|.+|+++.++||++|++||+++|++++++++++++++++++++++.+|||++++||++++++++++.||
T Consensus        81 ~~~~~~~~gd~v~id~g~~~~gy~~D~~RT~~~G~~s~~~~~~~~~~~~a~~a~i~~~kpG~~~~dv~~~~~~~~~~~g~  160 (249)
T d1o0xa_          81 LKEKVFKEGDIVSVDVGAVYQGLYGDAAVTYIVGETDERGKELVRVTREVLEKAIKMIKPGIRLGDVSHCIQETVESVGF  160 (249)
T ss_dssp             CTTCBCCTTCEEEEEEEEEETTEEEEEEEEEESSCCCHHHHHHHHHHHHHHHHHHHTCCTTSBHHHHHHHHHHHHHHTTC
T ss_pred             ccccccccccceeeecceeecceecccccceeecCcChhhHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHhcCC
Confidence             6788999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CcccCcccccCCCcCccCCCcCCC--CCCCCcccCce-EEEecceEEcCCC
Q 018857          298 SVVKSYCGHGIGELFHCAPNIPHY--SSLYHAFQPHI-FYIQKSFYFMDNG  345 (349)
Q Consensus       298 ~~~~~~~GHgIG~~~he~P~i~~~--~~~~~~Le~GM-ftIEPgly~~~~G  345 (349)
                      ...++++|||||+.+|+.|.+..+  .+++.+|+||| |+|||++|+++.|
T Consensus       161 ~~~~~~~GHgiG~~~~~~p~~~~~~~~~~~~~le~gMv~~iEp~~~~~~~~  211 (249)
T d1o0xa_         161 NVIRDYVGHGVGRELHEDPQIPNYGTPGTGVVLRKGMTLAIEPMVSEGDWR  211 (249)
T ss_dssp             EECCSSCEEECSSSSSEEEEECSCCCTTCSCBCCTTCEEEECCEEESSCCC
T ss_pred             eeecCCcccccccCCCcCCccceeccCCCCccccCCeEEEecceeecCCCc
Confidence            988889999999999999876543  45678999999 9999999987654
>d1pv9a2 d.127.1.1 (A:125-345) Aminopeptidase P, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1qxya_ d.127.1.1 (A:) Methionine aminopeptidase {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d2gg2a1 d.127.1.1 (A:3-264) Methionine aminopeptidase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1chma2 d.127.1.1 (A:157-402) Creatinase, catalytic (C-terminal) domain {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1xgsa2 d.127.1.1 (A:1-194,A:272-295) Methionine aminopeptidase {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d2v3za2 d.127.1.1 (A:177-440) Aminopeptidase P, C-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1b6aa2 d.127.1.1 (A:110-374,A:449-478) Methionine aminopeptidase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2dana1 g.85.1.1 (A:8-54) Zinc finger MYND domain-containing protein 10, ZMYND10 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2dj8a1 g.85.1.1 (A:8-54) Zinc finger MYND domain-containing protein 2, MTG8 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2jw6a1 g.85.1.1 (A:503-540) Zinc finger MYND domain-containing protein 2, MTG8 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1pv9a2 d.127.1.1 (A:125-345) Aminopeptidase P, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d2gg2a1 d.127.1.1 (A:3-264) Methionine aminopeptidase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1chma2 d.127.1.1 (A:157-402) Creatinase, catalytic (C-terminal) domain {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1xgsa2 d.127.1.1 (A:1-194,A:272-295) Methionine aminopeptidase {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1qxya_ d.127.1.1 (A:) Methionine aminopeptidase {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1o0xa_ d.127.1.1 (A:) Methionine aminopeptidase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2v3za2 d.127.1.1 (A:177-440) Aminopeptidase P, C-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1b6aa2 d.127.1.1 (A:110-374,A:449-478) Methionine aminopeptidase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1lv3a_ g.39.1.9 (A:) Hypothetical zinc finger protein YacG {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1x4sa1 g.85.1.2 (A:8-53) Zinc finger HIT domain containing protein 2, ZNHIT2 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure