Citrus Sinensis ID: 018898
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 349 | ||||||
| 255584058 | 350 | zinc finger protein, putative [Ricinus c | 0.968 | 0.965 | 0.715 | 1e-145 | |
| 449441193 | 424 | PREDICTED: probable S-acyltransferase At | 0.974 | 0.801 | 0.664 | 1e-137 | |
| 356576071 | 439 | PREDICTED: LOW QUALITY PROTEIN: probable | 0.979 | 0.779 | 0.665 | 1e-135 | |
| 224085153 | 422 | predicted protein [Populus trichocarpa] | 0.979 | 0.810 | 0.660 | 1e-135 | |
| 255566660 | 414 | zinc finger protein, putative [Ricinus c | 0.948 | 0.799 | 0.682 | 1e-133 | |
| 356559619 | 430 | PREDICTED: probable S-acyltransferase At | 0.982 | 0.797 | 0.668 | 1e-133 | |
| 356499454 | 430 | PREDICTED: probable S-acyltransferase At | 0.982 | 0.797 | 0.668 | 1e-133 | |
| 357443583 | 422 | Palmitoyltransferase SWF1 [Medicago trun | 0.971 | 0.803 | 0.648 | 1e-133 | |
| 449446405 | 427 | PREDICTED: probable S-acyltransferase At | 0.985 | 0.805 | 0.643 | 1e-132 | |
| 363807620 | 436 | uncharacterized protein LOC100805189 [Gl | 0.982 | 0.786 | 0.647 | 1e-132 |
| >gi|255584058|ref|XP_002532773.1| zinc finger protein, putative [Ricinus communis] gi|223527483|gb|EEF29612.1| zinc finger protein, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 519 bits (1337), Expect = e-145, Method: Compositional matrix adjust.
Identities = 249/348 (71%), Positives = 289/348 (83%), Gaps = 10/348 (2%)
Query: 7 VYQVWKGRNKFMFNGRLIFGPDAKSIVVTLLLILVPIVTFCSNVARNLLHEVSTYTTGYA 66
VYQVWKGRN F+FNGRLIFGPDAKS+VVT+LLI+VP++ FC+NVA+NLLHE TY GY
Sbjct: 5 VYQVWKGRNIFLFNGRLIFGPDAKSLVVTILLIVVPVIIFCTNVAKNLLHEFPTYNAGYV 64
Query: 67 IMGVAIMLTVYVLVLLFLTSARDPGIVPRNLHPPEEDVTYDSSASIETGGGTQTPIPRVP 126
I+ + I+ T+YVLVLL LTSARDPGIVPRNLHPPEED+ YDSSAS++ GG QTP PR+P
Sbjct: 65 ILAIVILFTIYVLVLLLLTSARDPGIVPRNLHPPEEDI-YDSSASLDVGG-RQTPTPRLP 122
Query: 127 RTKEVLIDGRIVVKVKYCDTCKLYRPPRCSHCSVCDNCVERFDHHCPWVGQCIGQRNYRY 186
RTK+VL++G+ VKVKYC+TC LYRPPRCSHCSVCDNCVERFDHHCPWVGQCIG RNYRY
Sbjct: 123 RTKDVLVNGK-HVKVKYCETCMLYRPPRCSHCSVCDNCVERFDHHCPWVGQCIGLRNYRY 181
Query: 187 FFLFVTSSALLCIFIFAMSALHLKYQIDYYGNVWKAIKESPASVILMAYCFFFLWFVGGL 246
FFLFV+SSALLCIF+FAMSA+++K +D YG VWKA+K+SPASVILM YCFFFLWFVGGL
Sbjct: 182 FFLFVSSSALLCIFVFAMSAVNIKLLMDDYGTVWKAMKKSPASVILMGYCFFFLWFVGGL 241
Query: 247 ACFHLYLISTNQTTYENFRYRREDGVRLYDRGCLNNFLEVFCTKIKPSRNNFRTYAQENE 306
CFHLYLI NQTTYENFRY +G +Y+RGCL NFLEVFCT++KPSRN FR+ +E
Sbjct: 242 TCFHLYLIGRNQTTYENFRYGARNGPNVYNRGCLINFLEVFCTRMKPSRNKFRSLVREQS 301
Query: 307 SRPRTHTRTTPEAETD-----RRAKVEDDREIGGDLLKISKRRDVEEA 349
S P R E D RRAKVED+ +I DL KIS+RR+VEEA
Sbjct: 302 SMP--PVRLAREINIDDSDGFRRAKVEDNLDIENDLSKISERRNVEEA 347
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449441193|ref|XP_004138367.1| PREDICTED: probable S-acyltransferase At4g24630-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|356576071|ref|XP_003556158.1| PREDICTED: LOW QUALITY PROTEIN: probable S-acyltransferase At4g24630-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|224085153|ref|XP_002307509.1| predicted protein [Populus trichocarpa] gi|222856958|gb|EEE94505.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|255566660|ref|XP_002524314.1| zinc finger protein, putative [Ricinus communis] gi|223536405|gb|EEF38054.1| zinc finger protein, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|356559619|ref|XP_003548096.1| PREDICTED: probable S-acyltransferase At4g24630-like isoform 1 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|356499454|ref|XP_003518555.1| PREDICTED: probable S-acyltransferase At4g24630-like isoform 1 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|357443583|ref|XP_003592069.1| Palmitoyltransferase SWF1 [Medicago truncatula] gi|355481117|gb|AES62320.1| Palmitoyltransferase SWF1 [Medicago truncatula] | Back alignment and taxonomy information |
|---|
| >gi|449446405|ref|XP_004140962.1| PREDICTED: probable S-acyltransferase At4g24630-like [Cucumis sativus] gi|449497109|ref|XP_004160314.1| PREDICTED: probable S-acyltransferase At4g24630-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|363807620|ref|NP_001242156.1| uncharacterized protein LOC100805189 [Glycine max] gi|255635368|gb|ACU18037.1| unknown [Glycine max] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 349 | ||||||
| TAIR|locus:2121949 | 407 | AT4G24630 [Arabidopsis thalian | 0.974 | 0.835 | 0.596 | 5.9e-112 | |
| TAIR|locus:2091960 | 443 | AT3G26935 "AT3G26935" [Arabido | 0.853 | 0.672 | 0.514 | 2.4e-83 | |
| TAIR|locus:2163001 | 410 | AT5G41060 [Arabidopsis thalian | 0.911 | 0.775 | 0.483 | 4.7e-80 | |
| TAIR|locus:2099483 | 476 | AT3G48760 [Arabidopsis thalian | 0.911 | 0.668 | 0.450 | 1.4e-78 | |
| TAIR|locus:2080555 | 477 | AT3G56930 [Arabidopsis thalian | 0.948 | 0.693 | 0.462 | 2.1e-77 | |
| TAIR|locus:2175349 | 413 | AT5G05070 "AT5G05070" [Arabido | 0.931 | 0.786 | 0.428 | 1.6e-70 | |
| TAIR|locus:2063172 | 411 | AT2G40990 [Arabidopsis thalian | 0.925 | 0.785 | 0.414 | 5.6e-68 | |
| TAIR|locus:2103650 | 338 | AT3G56920 [Arabidopsis thalian | 0.845 | 0.872 | 0.427 | 1.8e-64 | |
| MGI|MGI:2653229 | 489 | Zdhhc14 "zinc finger, DHHC dom | 0.836 | 0.597 | 0.378 | 7.2e-52 | |
| UNIPROTKB|Q8IZN3 | 488 | ZDHHC14 "Probable palmitoyltra | 0.836 | 0.598 | 0.385 | 1.5e-51 |
| TAIR|locus:2121949 AT4G24630 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1105 (394.0 bits), Expect = 5.9e-112, P = 5.9e-112
Identities = 211/354 (59%), Positives = 257/354 (72%)
Query: 5 QRVYQVWKGRNKFMFNGRLIFGPDAKSXXXXXXXXXXXXXXFCSNVARNLLHEVSTYTTG 64
QRV+QVWKG NKF+ GRLIFGPDA+S FC VAR+L HE S Y G
Sbjct: 3 QRVFQVWKGSNKFILGGRLIFGPDARSLPLTLLLIIVPVVLFCVFVARHLRHEFSPYNAG 62
Query: 65 YAIMGVAIMXXXXXXXXXXXXSARDPGIVPRNLHPPEEDVTYDSSASIETGGGTQTPIPR 124
YAIM VAI+ SARDPGIVPRN HPPEED+ Y+++ S + G QTP +
Sbjct: 63 YAIMVVAILFTIYVLILLFFTSARDPGIVPRNSHPPEEDLRYETTVSAD---GRQTPSVQ 119
Query: 125 VPRTKEVLIDGRIVVKVKYCDTCKLYRPPRCSHCSVCDNCVERFDHHCPWVGQCIGQRNY 184
+PRTKEV+++G + V+VKYCDTC LYRPPRCSHCS+C+NCVERFDHHCPWVGQCIG RNY
Sbjct: 120 IPRTKEVIVNG-VSVRVKYCDTCMLYRPPRCSHCSICNNCVERFDHHCPWVGQCIGLRNY 178
Query: 185 RYFFLFVTSSALLCIFIFAMSALHLKYQIDYY-GNVWKAIKESPASVILMAYCFFFLWFV 243
RYFF+FV+SS LLCI+IF+MSA+++K +D+ VW+A+KESP +V+LM YCF LWFV
Sbjct: 179 RYFFMFVSSSTLLCIYIFSMSAVYIKILMDHQQATVWRAMKESPWAVVLMIYCFIALWFV 238
Query: 244 GGLACFHLYLISTNQTTYENFRYRREDGVRL-YDRGCLNNFLEVFCTKIKPSRNNFRTYA 302
GGL FHLYLISTNQTTYE RYR + Y+RGC NNFLEVFC+K+KPSRNNFR +
Sbjct: 239 GGLTAFHLYLISTNQTTYEKLRYRSSHSRSIVYNRGCPNNFLEVFCSKVKPSRNNFRAFI 298
Query: 303 QENESR----PRTHTRTTPEAETD---RRAKVEDDREIGGDLLKISKRRDVEEA 349
+E R P T TR + EAE + RR KVEDD +IG DL+ +S+R + E+A
Sbjct: 299 EEEPPRVITLPST-TRESGEAEDENVTRRQKVEDDLDIGDDLMNLSRRCNAEDA 351
|
|
| TAIR|locus:2091960 AT3G26935 "AT3G26935" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2163001 AT5G41060 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2099483 AT3G48760 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2080555 AT3G56930 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2175349 AT5G05070 "AT5G05070" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2063172 AT2G40990 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2103650 AT3G56920 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:2653229 Zdhhc14 "zinc finger, DHHC domain containing 14" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q8IZN3 ZDHHC14 "Probable palmitoyltransferase ZDHHC14" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| eugene3.00051021 | hypothetical protein (422 aa) | |||||||
(Populus trichocarpa) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 349 | |||
| pfam01529 | 167 | pfam01529, zf-DHHC, DHHC palmitoyltransferase | 1e-50 | |
| COG5273 | 309 | COG5273, COG5273, Uncharacterized protein containi | 3e-31 |
| >gnl|CDD|216554 pfam01529, zf-DHHC, DHHC palmitoyltransferase | Back alignment and domain information |
|---|
Score = 166 bits (421), Expect = 1e-50
Identities = 69/189 (36%), Positives = 94/189 (49%), Gaps = 22/189 (11%)
Query: 79 LVLLFLTSARDPGIVPRNLHPPEEDVTYDSSASIETGGGTQTPIPRVPRTKEVLIDGRIV 138
L F T DPG VP+N E++ D E +G
Sbjct: 1 LWSYFKTIFTDPGYVPKNPTEKEQEKQPD----------------------EESEEGDEE 38
Query: 139 VKVKYCDTCKLYRPPRCSHCSVCDNCVERFDHHCPWVGQCIGQRNYRYFFLFVTSSALLC 198
++K+C TC + +PPR HC VC+ CV RFDHHCPW+ CIG+RN++YF LF+ L
Sbjct: 39 DELKFCSTCNIIKPPRSHHCRVCNRCVLRFDHHCPWLNNCIGRRNHKYFLLFLLYLTLYL 98
Query: 199 IFIFAMSALHLKYQIDYYGNVWKAIKESPASVILMAYCFFFLWFVGGLACFHLYLISTNQ 258
I + +S +L Y I + I +S+IL+ FFL F+ L FHLYLI N
Sbjct: 99 ILLLVLSFYYLVYLIRNIELFFFLILSLFSSIILLVLSLFFLLFLSFLLFFHLYLILKNI 158
Query: 259 TTYENFRYR 267
TTYE + +
Sbjct: 159 TTYEYIKKK 167
|
This family includes the well known DHHC zinc binding domain as well as three of the four conserved transmembrane regions found in this family of palmitoyltransferase enzymes. Length = 167 |
| >gnl|CDD|227598 COG5273, COG5273, Uncharacterized protein containing DHHC-type Zn finger [General function prediction only] | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 349 | |||
| KOG1311 | 299 | consensus DHHC-type Zn-finger proteins [General fu | 100.0 | |
| KOG1315 | 307 | consensus Predicted DHHC-type Zn-finger protein [G | 100.0 | |
| PF01529 | 174 | zf-DHHC: DHHC palmitoyltransferase; InterPro: IPR0 | 100.0 | |
| KOG1314 | 414 | consensus DHHC-type Zn-finger protein [General fun | 100.0 | |
| COG5273 | 309 | Uncharacterized protein containing DHHC-type Zn fi | 100.0 | |
| KOG1313 | 309 | consensus DHHC-type Zn-finger proteins [General fu | 100.0 | |
| KOG1312 | 341 | consensus DHHC-type Zn-finger proteins [General fu | 99.97 | |
| KOG0509 | 600 | consensus Ankyrin repeat and DHHC-type Zn-finger d | 99.95 | |
| COG5273 | 309 | Uncharacterized protein containing DHHC-type Zn fi | 93.53 | |
| KOG1311 | 299 | consensus DHHC-type Zn-finger proteins [General fu | 92.38 | |
| PF01529 | 174 | zf-DHHC: DHHC palmitoyltransferase; InterPro: IPR0 | 91.25 | |
| KOG0509 | 600 | consensus Ankyrin repeat and DHHC-type Zn-finger d | 82.35 |
| >KOG1311 consensus DHHC-type Zn-finger proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-50 Score=382.82 Aligned_cols=271 Identities=37% Similarity=0.594 Sum_probs=210.9
Q ss_pred eeeecCCCEEEeCceEEecCCCChhhhHHHhhhhheeeehhhcchhhhhhhccccchhHHHHHHHHHHHHHHHHHHhhhc
Q 018898 8 YQVWKGRNKFMFNGRLIFGPDAKSIVVTLLLILVPIVTFCSNVARNLLHEVSTYTTGYAIMGVAIMLTVYVLVLLFLTSA 87 (349)
Q Consensus 8 ~~~~~g~~~f~~~Gr~~~g~~~~~~~~t~~li~~~~~~f~~~~~~~l~~~~~~~~~~~~~~~i~~~l~~~~l~~~~~t~~ 87 (349)
++.+.|++.+.+.|+...+++....++++++++++.. ++++..+.+.+ ....+.+.++.+++.++.++.++.+..
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~l~~----~~~~~~~~~~~~if~~~~~~~~~~~~~ 75 (299)
T KOG1311|consen 1 FADFLGNRIPRRGGRILDPPVALPVLVTYVLLVGSET-FFVFLPPLLPR----GGVSPAVLVLGAIFFLLNILNLMLACF 75 (299)
T ss_pred CCcCccccccCCCceeeccccchhHHHHHHHHhhheE-EEEEEeeecCC----cccchHHHHHHHHHHHHHHHHHHHHHh
Confidence 4678999999999999999999999999999888775 54554444433 112234555556666666666666655
Q ss_pred c---CCCCCCCCCCCCCCcccCCCCcccccCCCCCCCCCCCCccceEEecceeeeceeeccccCCcCCCCCccccccccc
Q 018898 88 R---DPGIVPRNLHPPEEDVTYDSSASIETGGGTQTPIPRVPRTKEVLIDGRIVVKVKYCDTCKLYRPPRCSHCSVCDNC 164 (349)
Q Consensus 88 ~---DPG~vP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~g~~~~~~k~C~tC~~~rP~Rs~HC~~C~~C 164 (349)
+ |||++|++.++..+.. .+.++.++...+| ..++.+||.+|+.+||||||||++||+|
T Consensus 76 ~~~sdpg~~p~~~~~~~~~~------------------~~~~~~~~~~~~~-~~~~~~~C~~C~~~rPpRs~HCsvC~~C 136 (299)
T KOG1311|consen 76 RMLSDPGIVPRADDEQIEDP------------------ERAPLYKNVDVNG-IQVEWKYCDTCQLYRPPRSSHCSVCNNC 136 (299)
T ss_pred cccCCCceecCcccCCCCCc------------------cccccCCCcccCC-cccceEEcCcCcccCCCCcccchhhccc
Confidence 5 9999999741111100 1235567777888 8899999999999999999999999999
Q ss_pred cccccccccccCccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-cccch--hhhccchhHHHHHHHHHHHHH
Q 018898 165 VERFDHHCPWVGQCIGQRNYRYFFLFVTSSALLCIFIFAMSALHLKYQIDY-YGNVW--KAIKESPASVILMAYCFFFLW 241 (349)
Q Consensus 165 V~r~DHHCpWv~nCIG~~N~r~F~~Fl~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~ 241 (349)
|+||||||||+|||||+||||+|++|++++++.+++.++++...+...... ....+ ........++++.++++++++
T Consensus 137 V~rfDHHC~WvnnCVG~rNyr~F~~f~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 216 (299)
T KOG1311|consen 137 VLRFDHHCPWLNNCIGERNYRYFVLFLFYLALGVLLALAFLFYELLQRADNLKVNLTPVLIPAGTFLSALLGLLSALFLA 216 (299)
T ss_pred ccccCCCCCCccceECCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccchhHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999998888876554433 22222 222334456677778889999
Q ss_pred HHHHHHHHHHHHHHhCCceeeeeec-ccCCCCCCCChhHHHHHHHhcCCCCCCCcccccccc
Q 018898 242 FVGGLACFHLYLISTNQTTYENFRY-RREDGVRLYDRGCLNNFLEVFCTKIKPSRNNFRTYA 302 (349)
Q Consensus 242 ~~~~l~~~h~~li~~n~TT~E~~~~-~~~~~~n~y~~G~~~N~~~v~~~~~~p~~~~~~~~~ 302 (349)
+++.|+++|+++|++|+||+|.++. +.+...++||+|.++|++++||.+.++++.......
T Consensus 217 ~~~~l~~fh~~li~~~~Tt~e~~~~~~~~~~~~~~~~g~~~n~~~~~~~~~~~~~~~p~~~~ 278 (299)
T KOG1311|consen 217 FTSALLCFHIYLIKSGSTTYESIKSLDFVSRSNPYDLGLLKNLQEVFGGPLPLSWLSPFARS 278 (299)
T ss_pred HHHHHHHhheeeEecCcchhhhhhccccccccCCCchhHHHHHHHHhCCCCCcccccccccC
Confidence 9999999999999999999999874 333335999999999999999999998877666654
|
|
| >KOG1315 consensus Predicted DHHC-type Zn-finger protein [General function prediction only] | Back alignment and domain information |
|---|
| >PF01529 zf-DHHC: DHHC palmitoyltransferase; InterPro: IPR001594 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule | Back alignment and domain information |
|---|
| >KOG1314 consensus DHHC-type Zn-finger protein [General function prediction only] | Back alignment and domain information |
|---|
| >COG5273 Uncharacterized protein containing DHHC-type Zn finger [General function prediction only] | Back alignment and domain information |
|---|
| >KOG1313 consensus DHHC-type Zn-finger proteins [General function prediction only] | Back alignment and domain information |
|---|
| >KOG1312 consensus DHHC-type Zn-finger proteins [General function prediction only] | Back alignment and domain information |
|---|
| >KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only] | Back alignment and domain information |
|---|
| >COG5273 Uncharacterized protein containing DHHC-type Zn finger [General function prediction only] | Back alignment and domain information |
|---|
| >KOG1311 consensus DHHC-type Zn-finger proteins [General function prediction only] | Back alignment and domain information |
|---|
| >PF01529 zf-DHHC: DHHC palmitoyltransferase; InterPro: IPR001594 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule | Back alignment and domain information |
|---|
| >KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 349 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-04 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 43.3 bits (101), Expect = 1e-04
Identities = 50/419 (11%), Positives = 103/419 (24%), Gaps = 139/419 (33%)
Query: 38 LILVPIVTFCSNVARNLLHEVSTYTTGYAIMGVA-------IMLTVYVLVLLFLTSARDP 90
+L + + N + + + Y LL L + ++
Sbjct: 197 TVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNA 256
Query: 91 GIVP------RNLHPPEEDV-TYDSSASIETGGGTQTPIPRVPRTK-----EVLIDGRIV 138
+ L + T + T T I + EV ++
Sbjct: 257 KAWNAFNLSCKIL------LTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVK---SLL 307
Query: 139 VKVKYCDTCKLYRPPRCSHCS--VCDNCVERF-DHHCPW--------------VGQCIG- 180
+K C L P + E D W + +
Sbjct: 308 LKYLDCRPQDL--PREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNV 365
Query: 181 ------QRNYRYFFLFVTS----SALLCIFIFAMS------------------------- 205
++ + +F S + LL + F +
Sbjct: 366 LEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKEST 425
Query: 206 ----ALHLKYQ-------------IDYYGNVWKAIKESPASVILMAYCFFFLWFVGGLAC 248
+++L+ + +D+Y + L Y F +G
Sbjct: 426 ISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQY---FYSHIG---- 478
Query: 249 FHLYLISTNQ------TTYENFRYR----REDGVRLYDRGCLNNFLEVFCTKIKPSRNNF 298
HL I + + +FR+ R D G + N L+ +
Sbjct: 479 HHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQL--------KFY 530
Query: 299 RTYAQENES--------------RPRTHTRTTPEAETDRRAKVEDDREIGGDLLKISKR 343
+ Y +N+ + + + + R A + +D I + K +R
Sbjct: 531 KPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIALMAEDEAIFEEAHKQVQR 589
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 349 | |||
| d2ayja1 | 56 | Ribosomal protein L40e {Sulfolobus solfataricus [T | 82.31 |
| >d2ayja1 g.41.8.7 (A:1-56) Ribosomal protein L40e {Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Small proteins fold: Rubredoxin-like superfamily: Zn-binding ribosomal proteins family: Ribosomal protein L40e domain: Ribosomal protein L40e species: Sulfolobus solfataricus [TaxId: 2287]
Probab=82.31 E-value=0.25 Score=31.85 Aligned_cols=25 Identities=28% Similarity=0.715 Sum_probs=22.3
Q ss_pred eceeeccccCCcCCCCCcccccccc
Q 018898 139 VKVKYCDTCKLYRPPRCSHCSVCDN 163 (349)
Q Consensus 139 ~~~k~C~tC~~~rP~Rs~HC~~C~~ 163 (349)
...+.|..|...-|+|+..|+.|+.
T Consensus 17 ~~k~ICrkC~AR~p~rAt~CRKCg~ 41 (56)
T d2ayja1 17 FLKKVCRKCGALNPIRATKCRRCHS 41 (56)
T ss_dssp CCCEEETTTCCEECTTCSSCTTTCC
T ss_pred hhhHHHhhccccCCccccccccCCC
Confidence 3568999999999999999998875
|