Citrus Sinensis ID: 018898


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------35
MAKPQRVYQVWKGRNKFMFNGRLIFGPDAKSIVVTLLLILVPIVTFCSNVARNLLHEVSTYTTGYAIMGVAIMLTVYVLVLLFLTSARDPGIVPRNLHPPEEDVTYDSSASIETGGGTQTPIPRVPRTKEVLIDGRIVVKVKYCDTCKLYRPPRCSHCSVCDNCVERFDHHCPWVGQCIGQRNYRYFFLFVTSSALLCIFIFAMSALHLKYQIDYYGNVWKAIKESPASVILMAYCFFFLWFVGGLACFHLYLISTNQTTYENFRYRREDGVRLYDRGCLNNFLEVFCTKIKPSRNNFRTYAQENESRPRTHTRTTPEAETDRRAKVEDDREIGGDLLKISKRRDVEEA
cccccccEEEEccccEEEEccEEEEcccccHHHHHHHHHHHEEEEEEEEEHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccEEEEEcEEEEEEEEccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHcccccccccccccHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
cccccEEEEEEccccEEEEccEEEEcccccHHHHHHHHEHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHcccccccccccccccccccccccEEEEEcccEEEEEEEcccEEEccccccccccccccHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHcccHHHHHEHHHHHHHHHHHHHHHHHHHHHHccccccccccEcccccccccccHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHccc
MAKPQRVYQVWKGRNKfmfngrlifgpdaKSIVVTLLLILVPIVTFCSNVARNLLHEVSTYTTGYAIMGVAIMLTVYVLVLLFLtsardpgivprnlhppeedvtydssasietgggtqtpiprvprtkevlidgRIVVKVKYcdtcklyrpprcshcsvcdncverfdhhcpwvgqcigqrnyRYFFLFVTSSALLCIFIFAMSALHLKYQIDYYGNVWKAIKESPASVILMAYCFFFLWFVGGLACFHLYLISTNQTTYENFRYRREDGVRLYDRGCLNNFLEVfctkikpsrnnFRTYAqenesrprthtrttpeaetdrrakveddreigGDLLKISKRRDVEEA
makpqrvyQVWKGRNKFMFNGRLIFGPDAKSIVVTLLLILVPIVTFCSNVARNLLHEVSTYTTGYAIMGVAIMLTVYVLVLLFLTSARDPGIVPRNLHPPEEDVTYDSSasietgggtqtpiprvprtkevlidgrivVKVKYCDTcklyrpprcsHCSVCDNCVERFDHHCPWVGQCIGQRNYRYFFLFVTSSALLCIFIFAMSALHLKYQIDYYGNVWKAIKESPASVILMAYCFFFLWFVGGLACFHLYLISTNQTTYENFRYRREDGVRLYDRGCLNNFLEVfctkikpsrnnfrtyaqenesrprthtrttpeaetdrrakveddreiggdllkiskrrdveea
MAKPQRVYQVWKGRNKFMFNGRLIFGPDAKSivvtlllilvpivtFCSNVARNLLHEVSTYTTGYAIMGVAIMltvyvlvllfltSARDPGIVPRNLHPPEEDVTYDSSASIETGGGTQTPIPRVPRTKEVLIDGRIVVKVKYCDTCKLYRPPRCSHCSVCDNCVERFDHHCPWVGQCIGQRNYRYFFLFVTSSALLCIFIFAMSALHLKYQIDYYGNVWKAIKESPASVILMAYCFFFLWFVGGLACFHLYLISTNQTTYENFRYRREDGVRLYDRGCLNNFLEVFCTKIKPSRNNFRTYAQENESRPRTHTRTTPEAETDRRAKVEDDREIGGDLLKISKRRDVEEA
******VYQVWKGRNKFMFNGRLIFGPDAKSIVVTLLLILVPIVTFCSNVARNLLHEVSTYTTGYAIMGVAIMLTVYVLVLLFLTSARDPGIV*********************************RTKEVLIDGRIVVKVKYCDTCKLYRPPRCSHCSVCDNCVERFDHHCPWVGQCIGQRNYRYFFLFVTSSALLCIFIFAMSALHLKYQIDYYGNVWKAIKESPASVILMAYCFFFLWFVGGLACFHLYLISTNQTTYENFRYRREDGVRLYDRGCLNNFLEVFCTKIKP********************************************************
***PQRVYQVWKGRNKFMFNGRLIFGPDAKSIVVTLLLILVPIVTFCSNVARNLLHEVSTYTTGYAIMGVAIMLTVYVLVLLFLTSARDPGIVPRNLHPPEEDVTYD*****************VPRTKEVLIDGRIVVKVKYCDTCKLYRPPRCSHCSVCDNCVERFDHHCPWVGQCIGQRNYRYFFLFVTSSALLCIFIFAMSALHLKYQIDYYGNVWKAIKESPASVILMAYCFFFLWFVGGLACFHLYLISTNQTTYENFRYRREDGVRLYDRGCLNNFLEVFCTKIKPSRNNFRTY************************************************
MAKPQRVYQVWKGRNKFMFNGRLIFGPDAKSIVVTLLLILVPIVTFCSNVARNLLHEVSTYTTGYAIMGVAIMLTVYVLVLLFLTSARDPGIVPRNLHPPEEDVTYDSSASIETGGGTQTPIPRVPRTKEVLIDGRIVVKVKYCDTCKLYRPPRCSHCSVCDNCVERFDHHCPWVGQCIGQRNYRYFFLFVTSSALLCIFIFAMSALHLKYQIDYYGNVWKAIKESPASVILMAYCFFFLWFVGGLACFHLYLISTNQTTYENFRYRREDGVRLYDRGCLNNFLEVFCTKIKPSRNNFRTYA**************************DDREIGGDLLKIS********
**KPQRVYQVWKGRNKFMFNGRLIFGPDAKSIVVTLLLILVPIVTFCSNVARNLLHEVSTYTTGYAIMGVAIMLTVYVLVLLFLTSARDPGIVPRNLH***********************IPRVPRTKEVLIDGRIVVKVKYCDTCKLYRPPRCSHCSVCDNCVERFDHHCPWVGQCIGQRNYRYFFLFVTSSALLCIFIFAMSALHLKYQIDYYGNVWKAIKESPASVILMAYCFFFLWFVGGLACFHLYLISTNQTTYENFRYRREDGVRLYDRGCLNNFLEVFCTKIKPSRNNFRTY************************************************
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MAKPQRVYQVWKGRNKFMFNGRLIFGPDAKSIVVTLLLILVPIVTFCSNVARNLLHEVSTYTTGYAIMGVAIMLTVYVLVLLFLTSARDPGIVPRNLHPPEEDVTYDSSASIETGGGTQTPIPRVPRTKEVLIDGRIVVKVKYCDTCKLYRPPRCSHCSVCDNCVERFDHHCPWVGQCIGQRNYRYFFLFVTSSALLCIFIFAMSALHLKYQIDYYGNVWKAIKESPASVILMAYCFFFLWFVGGLACFHLYLISTNQTTYENFRYRREDGVRLYDRGCLNNFLEVFCTKIKPSRNNFRTYAQENESRPRTHTRTTPEAETDRRAKVEDDREIGGDLLKISKRRDVEEA
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query349 2.2.26 [Sep-21-2011]
Q9SB58407 Probable S-acyltransferas yes no 0.974 0.835 0.641 1e-131
Q8VYS8407 Probable S-acyltransferas no no 0.954 0.818 0.562 1e-112
Q0WQK2443 Probable S-acyltransferas no no 0.853 0.672 0.550 5e-97
Q9FLM3410 Probable S-acyltransferas no no 0.914 0.778 0.512 2e-92
Q9M1K5 477 Probable S-acyltransferas no no 0.954 0.698 0.480 4e-88
Q9M306 476 Probable S-acyltransferas no no 0.908 0.665 0.488 1e-87
Q5PNZ1413 Probable S-acyltransferas no no 0.931 0.786 0.458 6e-80
O80685411 Probable S-acyltransferas no no 0.925 0.785 0.428 1e-73
B3DN87338 Probable S-acyltransferas no no 0.836 0.863 0.462 3e-73
Q8BQQ1 489 Probable palmitoyltransfe yes no 0.828 0.591 0.414 1e-58
>sp|Q9SB58|ZDH19_ARATH Probable S-acyltransferase At4g24630 OS=Arabidopsis thaliana GN=At4g24630 PE=1 SV=2 Back     alignment and function desciption
 Score =  469 bits (1207), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 227/354 (64%), Positives = 279/354 (78%), Gaps = 14/354 (3%)

Query: 5   QRVYQVWKGRNKFMFNGRLIFGPDAKSIVVTLLLILVPIVTFCSNVARNLLHEVSTYTTG 64
           QRV+QVWKG NKF+  GRLIFGPDA+S+ +TLLLI+VP+V FC  VAR+L HE S Y  G
Sbjct: 3   QRVFQVWKGSNKFILGGRLIFGPDARSLPLTLLLIIVPVVLFCVFVARHLRHEFSPYNAG 62

Query: 65  YAIMGVAIMLTVYVLVLLFLTSARDPGIVPRNLHPPEEDVTYDSSASIETGGGTQTPIPR 124
           YAIM VAI+ T+YVL+LLF TSARDPGIVPRN HPPEED+ Y+++ S +   G QTP  +
Sbjct: 63  YAIMVVAILFTIYVLILLFFTSARDPGIVPRNSHPPEEDLRYETTVSAD---GRQTPSVQ 119

Query: 125 VPRTKEVLIDGRIVVKVKYCDTCKLYRPPRCSHCSVCDNCVERFDHHCPWVGQCIGQRNY 184
           +PRTKEV+++G + V+VKYCDTC LYRPPRCSHCS+C+NCVERFDHHCPWVGQCIG RNY
Sbjct: 120 IPRTKEVIVNG-VSVRVKYCDTCMLYRPPRCSHCSICNNCVERFDHHCPWVGQCIGLRNY 178

Query: 185 RYFFLFVTSSALLCIFIFAMSALHLKYQIDY-YGNVWKAIKESPASVILMAYCFFFLWFV 243
           RYFF+FV+SS LLCI+IF+MSA+++K  +D+    VW+A+KESP +V+LM YCF  LWFV
Sbjct: 179 RYFFMFVSSSTLLCIYIFSMSAVYIKILMDHQQATVWRAMKESPWAVVLMIYCFIALWFV 238

Query: 244 GGLACFHLYLISTNQTTYENFRYRREDGVRL-YDRGCLNNFLEVFCTKIKPSRNNFRTYA 302
           GGL  FHLYLISTNQTTYE  RYR      + Y+RGC NNFLEVFC+K+KPSRNNFR + 
Sbjct: 239 GGLTAFHLYLISTNQTTYEKLRYRSSHSRSIVYNRGCPNNFLEVFCSKVKPSRNNFRAFI 298

Query: 303 QENESR----PRTHTRTTPEAETD---RRAKVEDDREIGGDLLKISKRRDVEEA 349
           +E   R    P T TR + EAE +   RR KVEDD +IG DL+ +S+R + E+A
Sbjct: 299 EEEPPRVITLPST-TRESGEAEDENVTRRQKVEDDLDIGDDLMNLSRRCNAEDA 351





Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: -
>sp|Q8VYS8|ZDH24_ARATH Probable S-acyltransferase At5g50020 OS=Arabidopsis thaliana GN=At5g50020 PE=1 SV=1 Back     alignment and function description
>sp|Q0WQK2|ZDHC9_ARATH Probable S-acyltransferase At3g26935 OS=Arabidopsis thaliana GN=At3g26935 PE=1 SV=1 Back     alignment and function description
>sp|Q9FLM3|ZDH23_ARATH Probable S-acyltransferase At5g41060 OS=Arabidopsis thaliana GN=At5g41060 PE=2 SV=1 Back     alignment and function description
>sp|Q9M1K5|ZDH13_ARATH Probable S-acyltransferase At3g56930 OS=Arabidopsis thaliana GN=At3g56930 PE=2 SV=1 Back     alignment and function description
>sp|Q9M306|ZDH10_ARATH Probable S-acyltransferase At3g48760 OS=Arabidopsis thaliana GN=At3g48760 PE=1 SV=2 Back     alignment and function description
>sp|Q5PNZ1|ZDH21_ARATH Probable S-acyltransferase At5g05070 OS=Arabidopsis thaliana GN=At5g05070 PE=2 SV=1 Back     alignment and function description
>sp|O80685|ZDHC4_ARATH Probable S-acyltransferase At2g40990 OS=Arabidopsis thaliana GN=At2g40990 PE=2 SV=3 Back     alignment and function description
>sp|B3DN87|ZDH12_ARATH Probable S-acyltransferase At3g56920 OS=Arabidopsis thaliana GN=At3g56920 PE=2 SV=1 Back     alignment and function description
>sp|Q8BQQ1|ZDH14_MOUSE Probable palmitoyltransferase ZDHHC14 OS=Mus musculus GN=Zdhhc14 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query349
255584058350 zinc finger protein, putative [Ricinus c 0.968 0.965 0.715 1e-145
449441193424 PREDICTED: probable S-acyltransferase At 0.974 0.801 0.664 1e-137
356576071439 PREDICTED: LOW QUALITY PROTEIN: probable 0.979 0.779 0.665 1e-135
224085153422 predicted protein [Populus trichocarpa] 0.979 0.810 0.660 1e-135
255566660414 zinc finger protein, putative [Ricinus c 0.948 0.799 0.682 1e-133
356559619430 PREDICTED: probable S-acyltransferase At 0.982 0.797 0.668 1e-133
356499454430 PREDICTED: probable S-acyltransferase At 0.982 0.797 0.668 1e-133
357443583422 Palmitoyltransferase SWF1 [Medicago trun 0.971 0.803 0.648 1e-133
449446405427 PREDICTED: probable S-acyltransferase At 0.985 0.805 0.643 1e-132
363807620436 uncharacterized protein LOC100805189 [Gl 0.982 0.786 0.647 1e-132
>gi|255584058|ref|XP_002532773.1| zinc finger protein, putative [Ricinus communis] gi|223527483|gb|EEF29612.1| zinc finger protein, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  519 bits (1337), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 249/348 (71%), Positives = 289/348 (83%), Gaps = 10/348 (2%)

Query: 7   VYQVWKGRNKFMFNGRLIFGPDAKSIVVTLLLILVPIVTFCSNVARNLLHEVSTYTTGYA 66
           VYQVWKGRN F+FNGRLIFGPDAKS+VVT+LLI+VP++ FC+NVA+NLLHE  TY  GY 
Sbjct: 5   VYQVWKGRNIFLFNGRLIFGPDAKSLVVTILLIVVPVIIFCTNVAKNLLHEFPTYNAGYV 64

Query: 67  IMGVAIMLTVYVLVLLFLTSARDPGIVPRNLHPPEEDVTYDSSASIETGGGTQTPIPRVP 126
           I+ + I+ T+YVLVLL LTSARDPGIVPRNLHPPEED+ YDSSAS++ GG  QTP PR+P
Sbjct: 65  ILAIVILFTIYVLVLLLLTSARDPGIVPRNLHPPEEDI-YDSSASLDVGG-RQTPTPRLP 122

Query: 127 RTKEVLIDGRIVVKVKYCDTCKLYRPPRCSHCSVCDNCVERFDHHCPWVGQCIGQRNYRY 186
           RTK+VL++G+  VKVKYC+TC LYRPPRCSHCSVCDNCVERFDHHCPWVGQCIG RNYRY
Sbjct: 123 RTKDVLVNGK-HVKVKYCETCMLYRPPRCSHCSVCDNCVERFDHHCPWVGQCIGLRNYRY 181

Query: 187 FFLFVTSSALLCIFIFAMSALHLKYQIDYYGNVWKAIKESPASVILMAYCFFFLWFVGGL 246
           FFLFV+SSALLCIF+FAMSA+++K  +D YG VWKA+K+SPASVILM YCFFFLWFVGGL
Sbjct: 182 FFLFVSSSALLCIFVFAMSAVNIKLLMDDYGTVWKAMKKSPASVILMGYCFFFLWFVGGL 241

Query: 247 ACFHLYLISTNQTTYENFRYRREDGVRLYDRGCLNNFLEVFCTKIKPSRNNFRTYAQENE 306
            CFHLYLI  NQTTYENFRY   +G  +Y+RGCL NFLEVFCT++KPSRN FR+  +E  
Sbjct: 242 TCFHLYLIGRNQTTYENFRYGARNGPNVYNRGCLINFLEVFCTRMKPSRNKFRSLVREQS 301

Query: 307 SRPRTHTRTTPEAETD-----RRAKVEDDREIGGDLLKISKRRDVEEA 349
           S P    R   E   D     RRAKVED+ +I  DL KIS+RR+VEEA
Sbjct: 302 SMP--PVRLAREINIDDSDGFRRAKVEDNLDIENDLSKISERRNVEEA 347




Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449441193|ref|XP_004138367.1| PREDICTED: probable S-acyltransferase At4g24630-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356576071|ref|XP_003556158.1| PREDICTED: LOW QUALITY PROTEIN: probable S-acyltransferase At4g24630-like [Glycine max] Back     alignment and taxonomy information
>gi|224085153|ref|XP_002307509.1| predicted protein [Populus trichocarpa] gi|222856958|gb|EEE94505.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255566660|ref|XP_002524314.1| zinc finger protein, putative [Ricinus communis] gi|223536405|gb|EEF38054.1| zinc finger protein, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356559619|ref|XP_003548096.1| PREDICTED: probable S-acyltransferase At4g24630-like isoform 1 [Glycine max] Back     alignment and taxonomy information
>gi|356499454|ref|XP_003518555.1| PREDICTED: probable S-acyltransferase At4g24630-like isoform 1 [Glycine max] Back     alignment and taxonomy information
>gi|357443583|ref|XP_003592069.1| Palmitoyltransferase SWF1 [Medicago truncatula] gi|355481117|gb|AES62320.1| Palmitoyltransferase SWF1 [Medicago truncatula] Back     alignment and taxonomy information
>gi|449446405|ref|XP_004140962.1| PREDICTED: probable S-acyltransferase At4g24630-like [Cucumis sativus] gi|449497109|ref|XP_004160314.1| PREDICTED: probable S-acyltransferase At4g24630-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|363807620|ref|NP_001242156.1| uncharacterized protein LOC100805189 [Glycine max] gi|255635368|gb|ACU18037.1| unknown [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query349
TAIR|locus:2121949407 AT4G24630 [Arabidopsis thalian 0.974 0.835 0.596 5.9e-112
TAIR|locus:2091960443 AT3G26935 "AT3G26935" [Arabido 0.853 0.672 0.514 2.4e-83
TAIR|locus:2163001410 AT5G41060 [Arabidopsis thalian 0.911 0.775 0.483 4.7e-80
TAIR|locus:2099483 476 AT3G48760 [Arabidopsis thalian 0.911 0.668 0.450 1.4e-78
TAIR|locus:2080555 477 AT3G56930 [Arabidopsis thalian 0.948 0.693 0.462 2.1e-77
TAIR|locus:2175349413 AT5G05070 "AT5G05070" [Arabido 0.931 0.786 0.428 1.6e-70
TAIR|locus:2063172411 AT2G40990 [Arabidopsis thalian 0.925 0.785 0.414 5.6e-68
TAIR|locus:2103650338 AT3G56920 [Arabidopsis thalian 0.845 0.872 0.427 1.8e-64
MGI|MGI:2653229 489 Zdhhc14 "zinc finger, DHHC dom 0.836 0.597 0.378 7.2e-52
UNIPROTKB|Q8IZN3 488 ZDHHC14 "Probable palmitoyltra 0.836 0.598 0.385 1.5e-51
TAIR|locus:2121949 AT4G24630 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1105 (394.0 bits), Expect = 5.9e-112, P = 5.9e-112
 Identities = 211/354 (59%), Positives = 257/354 (72%)

Query:     5 QRVYQVWKGRNKFMFNGRLIFGPDAKSXXXXXXXXXXXXXXFCSNVARNLLHEVSTYTTG 64
             QRV+QVWKG NKF+  GRLIFGPDA+S              FC  VAR+L HE S Y  G
Sbjct:     3 QRVFQVWKGSNKFILGGRLIFGPDARSLPLTLLLIIVPVVLFCVFVARHLRHEFSPYNAG 62

Query:    65 YAIMGVAIMXXXXXXXXXXXXSARDPGIVPRNLHPPEEDVTYDSSASIETGGGTQTPIPR 124
             YAIM VAI+            SARDPGIVPRN HPPEED+ Y+++ S +   G QTP  +
Sbjct:    63 YAIMVVAILFTIYVLILLFFTSARDPGIVPRNSHPPEEDLRYETTVSAD---GRQTPSVQ 119

Query:   125 VPRTKEVLIDGRIVVKVKYCDTCKLYRPPRCSHCSVCDNCVERFDHHCPWVGQCIGQRNY 184
             +PRTKEV+++G + V+VKYCDTC LYRPPRCSHCS+C+NCVERFDHHCPWVGQCIG RNY
Sbjct:   120 IPRTKEVIVNG-VSVRVKYCDTCMLYRPPRCSHCSICNNCVERFDHHCPWVGQCIGLRNY 178

Query:   185 RYFFLFVTSSALLCIFIFAMSALHLKYQIDYY-GNVWKAIKESPASVILMAYCFFFLWFV 243
             RYFF+FV+SS LLCI+IF+MSA+++K  +D+    VW+A+KESP +V+LM YCF  LWFV
Sbjct:   179 RYFFMFVSSSTLLCIYIFSMSAVYIKILMDHQQATVWRAMKESPWAVVLMIYCFIALWFV 238

Query:   244 GGLACFHLYLISTNQTTYENFRYRREDGVRL-YDRGCLNNFLEVFCTKIKPSRNNFRTYA 302
             GGL  FHLYLISTNQTTYE  RYR      + Y+RGC NNFLEVFC+K+KPSRNNFR + 
Sbjct:   239 GGLTAFHLYLISTNQTTYEKLRYRSSHSRSIVYNRGCPNNFLEVFCSKVKPSRNNFRAFI 298

Query:   303 QENESR----PRTHTRTTPEAETD---RRAKVEDDREIGGDLLKISKRRDVEEA 349
             +E   R    P T TR + EAE +   RR KVEDD +IG DL+ +S+R + E+A
Sbjct:   299 EEEPPRVITLPST-TRESGEAEDENVTRRQKVEDDLDIGDDLMNLSRRCNAEDA 351




GO:0004872 "receptor activity" evidence=IEA
GO:0007275 "multicellular organismal development" evidence=IEA
GO:0008270 "zinc ion binding" evidence=IEA
GO:0016020 "membrane" evidence=IEA
GO:0005886 "plasma membrane" evidence=IDA
GO:0048573 "photoperiodism, flowering" evidence=RCA
TAIR|locus:2091960 AT3G26935 "AT3G26935" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2163001 AT5G41060 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2099483 AT3G48760 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2080555 AT3G56930 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2175349 AT5G05070 "AT5G05070" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2063172 AT2G40990 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2103650 AT3G56920 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
MGI|MGI:2653229 Zdhhc14 "zinc finger, DHHC domain containing 14" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|Q8IZN3 ZDHHC14 "Probable palmitoyltransferase ZDHHC14" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9SB58ZDH19_ARATH2, ., 3, ., 1, ., -0.64120.97420.8353yesno

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
eugene3.00051021
hypothetical protein (422 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query349
pfam01529167 pfam01529, zf-DHHC, DHHC palmitoyltransferase 1e-50
COG5273309 COG5273, COG5273, Uncharacterized protein containi 3e-31
>gnl|CDD|216554 pfam01529, zf-DHHC, DHHC palmitoyltransferase Back     alignment and domain information
 Score =  166 bits (421), Expect = 1e-50
 Identities = 69/189 (36%), Positives = 94/189 (49%), Gaps = 22/189 (11%)

Query: 79  LVLLFLTSARDPGIVPRNLHPPEEDVTYDSSASIETGGGTQTPIPRVPRTKEVLIDGRIV 138
           L   F T   DPG VP+N    E++   D                      E   +G   
Sbjct: 1   LWSYFKTIFTDPGYVPKNPTEKEQEKQPD----------------------EESEEGDEE 38

Query: 139 VKVKYCDTCKLYRPPRCSHCSVCDNCVERFDHHCPWVGQCIGQRNYRYFFLFVTSSALLC 198
            ++K+C TC + +PPR  HC VC+ CV RFDHHCPW+  CIG+RN++YF LF+    L  
Sbjct: 39  DELKFCSTCNIIKPPRSHHCRVCNRCVLRFDHHCPWLNNCIGRRNHKYFLLFLLYLTLYL 98

Query: 199 IFIFAMSALHLKYQIDYYGNVWKAIKESPASVILMAYCFFFLWFVGGLACFHLYLISTNQ 258
           I +  +S  +L Y I      +  I    +S+IL+    FFL F+  L  FHLYLI  N 
Sbjct: 99  ILLLVLSFYYLVYLIRNIELFFFLILSLFSSIILLVLSLFFLLFLSFLLFFHLYLILKNI 158

Query: 259 TTYENFRYR 267
           TTYE  + +
Sbjct: 159 TTYEYIKKK 167


This family includes the well known DHHC zinc binding domain as well as three of the four conserved transmembrane regions found in this family of palmitoyltransferase enzymes. Length = 167

>gnl|CDD|227598 COG5273, COG5273, Uncharacterized protein containing DHHC-type Zn finger [General function prediction only] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 349
KOG1311299 consensus DHHC-type Zn-finger proteins [General fu 100.0
KOG1315307 consensus Predicted DHHC-type Zn-finger protein [G 100.0
PF01529174 zf-DHHC: DHHC palmitoyltransferase; InterPro: IPR0 100.0
KOG1314414 consensus DHHC-type Zn-finger protein [General fun 100.0
COG5273309 Uncharacterized protein containing DHHC-type Zn fi 100.0
KOG1313309 consensus DHHC-type Zn-finger proteins [General fu 100.0
KOG1312341 consensus DHHC-type Zn-finger proteins [General fu 99.97
KOG0509600 consensus Ankyrin repeat and DHHC-type Zn-finger d 99.95
COG5273309 Uncharacterized protein containing DHHC-type Zn fi 93.53
KOG1311299 consensus DHHC-type Zn-finger proteins [General fu 92.38
PF01529174 zf-DHHC: DHHC palmitoyltransferase; InterPro: IPR0 91.25
KOG0509600 consensus Ankyrin repeat and DHHC-type Zn-finger d 82.35
>KOG1311 consensus DHHC-type Zn-finger proteins [General function prediction only] Back     alignment and domain information
Probab=100.00  E-value=2.6e-50  Score=382.82  Aligned_cols=271  Identities=37%  Similarity=0.594  Sum_probs=210.9

Q ss_pred             eeeecCCCEEEeCceEEecCCCChhhhHHHhhhhheeeehhhcchhhhhhhccccchhHHHHHHHHHHHHHHHHHHhhhc
Q 018898            8 YQVWKGRNKFMFNGRLIFGPDAKSIVVTLLLILVPIVTFCSNVARNLLHEVSTYTTGYAIMGVAIMLTVYVLVLLFLTSA   87 (349)
Q Consensus         8 ~~~~~g~~~f~~~Gr~~~g~~~~~~~~t~~li~~~~~~f~~~~~~~l~~~~~~~~~~~~~~~i~~~l~~~~l~~~~~t~~   87 (349)
                      ++.+.|++.+.+.|+...+++....++++++++++.. ++++..+.+.+    ....+.+.++.+++.++.++.++.+..
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~l~~----~~~~~~~~~~~~if~~~~~~~~~~~~~   75 (299)
T KOG1311|consen    1 FADFLGNRIPRRGGRILDPPVALPVLVTYVLLVGSET-FFVFLPPLLPR----GGVSPAVLVLGAIFFLLNILNLMLACF   75 (299)
T ss_pred             CCcCccccccCCCceeeccccchhHHHHHHHHhhheE-EEEEEeeecCC----cccchHHHHHHHHHHHHHHHHHHHHHh
Confidence            4678999999999999999999999999999888775 54554444433    112234555556666666666666655


Q ss_pred             c---CCCCCCCCCCCCCCcccCCCCcccccCCCCCCCCCCCCccceEEecceeeeceeeccccCCcCCCCCccccccccc
Q 018898           88 R---DPGIVPRNLHPPEEDVTYDSSASIETGGGTQTPIPRVPRTKEVLIDGRIVVKVKYCDTCKLYRPPRCSHCSVCDNC  164 (349)
Q Consensus        88 ~---DPG~vP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~g~~~~~~k~C~tC~~~rP~Rs~HC~~C~~C  164 (349)
                      +   |||++|++.++..+..                  .+.++.++...+| ..++.+||.+|+.+||||||||++||+|
T Consensus        76 ~~~sdpg~~p~~~~~~~~~~------------------~~~~~~~~~~~~~-~~~~~~~C~~C~~~rPpRs~HCsvC~~C  136 (299)
T KOG1311|consen   76 RMLSDPGIVPRADDEQIEDP------------------ERAPLYKNVDVNG-IQVEWKYCDTCQLYRPPRSSHCSVCNNC  136 (299)
T ss_pred             cccCCCceecCcccCCCCCc------------------cccccCCCcccCC-cccceEEcCcCcccCCCCcccchhhccc
Confidence            5   9999999741111100                  1235567777888 8899999999999999999999999999


Q ss_pred             cccccccccccCccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-cccch--hhhccchhHHHHHHHHHHHHH
Q 018898          165 VERFDHHCPWVGQCIGQRNYRYFFLFVTSSALLCIFIFAMSALHLKYQIDY-YGNVW--KAIKESPASVILMAYCFFFLW  241 (349)
Q Consensus       165 V~r~DHHCpWv~nCIG~~N~r~F~~Fl~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~  241 (349)
                      |+||||||||+|||||+||||+|++|++++++.+++.++++...+...... ....+  ........++++.++++++++
T Consensus       137 V~rfDHHC~WvnnCVG~rNyr~F~~f~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  216 (299)
T KOG1311|consen  137 VLRFDHHCPWLNNCIGERNYRYFVLFLFYLALGVLLALAFLFYELLQRADNLKVNLTPVLIPAGTFLSALLGLLSALFLA  216 (299)
T ss_pred             ccccCCCCCCccceECCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccchhHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999998888876554433 22222  222334456677778889999


Q ss_pred             HHHHHHHHHHHHHHhCCceeeeeec-ccCCCCCCCChhHHHHHHHhcCCCCCCCcccccccc
Q 018898          242 FVGGLACFHLYLISTNQTTYENFRY-RREDGVRLYDRGCLNNFLEVFCTKIKPSRNNFRTYA  302 (349)
Q Consensus       242 ~~~~l~~~h~~li~~n~TT~E~~~~-~~~~~~n~y~~G~~~N~~~v~~~~~~p~~~~~~~~~  302 (349)
                      +++.|+++|+++|++|+||+|.++. +.+...++||+|.++|++++||.+.++++.......
T Consensus       217 ~~~~l~~fh~~li~~~~Tt~e~~~~~~~~~~~~~~~~g~~~n~~~~~~~~~~~~~~~p~~~~  278 (299)
T KOG1311|consen  217 FTSALLCFHIYLIKSGSTTYESIKSLDFVSRSNPYDLGLLKNLQEVFGGPLPLSWLSPFARS  278 (299)
T ss_pred             HHHHHHHhheeeEecCcchhhhhhccccccccCCCchhHHHHHHHHhCCCCCcccccccccC
Confidence            9999999999999999999999874 333335999999999999999999998877666654



>KOG1315 consensus Predicted DHHC-type Zn-finger protein [General function prediction only] Back     alignment and domain information
>PF01529 zf-DHHC: DHHC palmitoyltransferase; InterPro: IPR001594 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule Back     alignment and domain information
>KOG1314 consensus DHHC-type Zn-finger protein [General function prediction only] Back     alignment and domain information
>COG5273 Uncharacterized protein containing DHHC-type Zn finger [General function prediction only] Back     alignment and domain information
>KOG1313 consensus DHHC-type Zn-finger proteins [General function prediction only] Back     alignment and domain information
>KOG1312 consensus DHHC-type Zn-finger proteins [General function prediction only] Back     alignment and domain information
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only] Back     alignment and domain information
>COG5273 Uncharacterized protein containing DHHC-type Zn finger [General function prediction only] Back     alignment and domain information
>KOG1311 consensus DHHC-type Zn-finger proteins [General function prediction only] Back     alignment and domain information
>PF01529 zf-DHHC: DHHC palmitoyltransferase; InterPro: IPR001594 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule Back     alignment and domain information
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query349
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-04
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 43.3 bits (101), Expect = 1e-04
 Identities = 50/419 (11%), Positives = 103/419 (24%), Gaps = 139/419 (33%)

Query: 38  LILVPIVTFCSNVARNLLHEVSTYTTGYAIMGVA-------IMLTVYVLVLLFLTSARDP 90
            +L  +      +  N        +     +          +    Y   LL L + ++ 
Sbjct: 197 TVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNA 256

Query: 91  GIVP------RNLHPPEEDV-TYDSSASIETGGGTQTPIPRVPRTK-----EVLIDGRIV 138
                     + L      + T     +      T T I     +      EV     ++
Sbjct: 257 KAWNAFNLSCKIL------LTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVK---SLL 307

Query: 139 VKVKYCDTCKLYRPPRCSHCS--VCDNCVERF-DHHCPW--------------VGQCIG- 180
           +K   C    L  P      +        E   D    W              +   +  
Sbjct: 308 LKYLDCRPQDL--PREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNV 365

Query: 181 ------QRNYRYFFLFVTS----SALLCIFIFAMS------------------------- 205
                 ++ +    +F  S    + LL +  F +                          
Sbjct: 366 LEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKEST 425

Query: 206 ----ALHLKYQ-------------IDYYGNVWKAIKESPASVILMAYCFFFLWFVGGLAC 248
               +++L+ +             +D+Y        +      L  Y   F   +G    
Sbjct: 426 ISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQY---FYSHIG---- 478

Query: 249 FHLYLISTNQ------TTYENFRYR----REDGVRLYDRGCLNNFLEVFCTKIKPSRNNF 298
            HL  I   +        + +FR+     R D       G + N L+            +
Sbjct: 479 HHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQL--------KFY 530

Query: 299 RTYAQENES--------------RPRTHTRTTPEAETDRRAKVEDDREIGGDLLKISKR 343
           + Y  +N+               +   +   +   +  R A + +D  I  +  K  +R
Sbjct: 531 KPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIALMAEDEAIFEEAHKQVQR 589


Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query349
d2ayja156 Ribosomal protein L40e {Sulfolobus solfataricus [T 82.31
>d2ayja1 g.41.8.7 (A:1-56) Ribosomal protein L40e {Sulfolobus solfataricus [TaxId: 2287]} Back     information, alignment and structure
class: Small proteins
fold: Rubredoxin-like
superfamily: Zn-binding ribosomal proteins
family: Ribosomal protein L40e
domain: Ribosomal protein L40e
species: Sulfolobus solfataricus [TaxId: 2287]
Probab=82.31  E-value=0.25  Score=31.85  Aligned_cols=25  Identities=28%  Similarity=0.715  Sum_probs=22.3

Q ss_pred             eceeeccccCCcCCCCCcccccccc
Q 018898          139 VKVKYCDTCKLYRPPRCSHCSVCDN  163 (349)
Q Consensus       139 ~~~k~C~tC~~~rP~Rs~HC~~C~~  163 (349)
                      ...+.|..|...-|+|+..|+.|+.
T Consensus        17 ~~k~ICrkC~AR~p~rAt~CRKCg~   41 (56)
T d2ayja1          17 FLKKVCRKCGALNPIRATKCRRCHS   41 (56)
T ss_dssp             CCCEEETTTCCEECTTCSSCTTTCC
T ss_pred             hhhHHHhhccccCCccccccccCCC
Confidence            3568999999999999999998875